AL504_RS01435 b8c9fc03acc00a3b979dc0880218a83e 344 Gene3D G3DSA:3.40.50.2300 41 148 2.9E-14 T 28-03-2018 AL504_RS01435 b8c9fc03acc00a3b979dc0880218a83e 344 Pfam PF13407 Periplasmic binding protein domain 48 286 1.7E-45 T 28-03-2018 IPR025997 Periplasmic binding protein AL504_RS01435 b8c9fc03acc00a3b979dc0880218a83e 344 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 23 2.3E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL504_RS01435 b8c9fc03acc00a3b979dc0880218a83e 344 SUPERFAMILY SSF53822 40 304 3.99E-52 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS01435 b8c9fc03acc00a3b979dc0880218a83e 344 Gene3D G3DSA:3.40.50.2300 149 287 5.5E-23 T 28-03-2018 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 Gene3D G3DSA:1.10.10.10 323 414 8.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 365 384 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 PIRSF PIRSF000774 1 477 3.9E-139 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 PRINTS PR00045 Sigma-54 factor signature 451 469 9.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 PRINTS PR00045 Sigma-54 factor signature 377 389 9.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 PRINTS PR00045 Sigma-54 factor signature 393 404 9.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 PRINTS PR00045 Sigma-54 factor signature 187 204 9.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 Pfam PF04963 Sigma-54 factor, core binding domain 110 305 5.3E-50 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 2 46 1.0E-12 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 6 475 3.0E-132 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS04355 4014622c4936c079ed903de391f75ba4 477 Pfam PF04552 Sigma-54, DNA binding domain 320 475 1.8E-60 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 90 4.8E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 SUPERFAMILY SSF48008 99 228 7.32E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 SMART SM00345 32 90 6.1E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 Gene3D G3DSA:1.20.120.530 87 238 7.8E-33 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 SMART SM00895 100 222 1.7E-20 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 Pfam PF07729 FCD domain 100 221 2.0E-24 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 6.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 6.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 SUPERFAMILY SSF46785 27 94 8.77E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17400 dee13a54c73dc92be5e7b6e3ee6468b3 238 Gene3D G3DSA:1.10.10.10 8 86 1.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 Gene3D G3DSA:3.90.190.20 714 854 3.3E-21 T 28-03-2018 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 473 496 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 Pfam PF08245 Mur ligase middle domain 475 686 7.2E-21 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 852 0.0 T 28-03-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 SUPERFAMILY SSF56059 204 334 1.04E-35 T 28-03-2018 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 SUPERFAMILY SSF56059 370 459 1.04E-35 T 28-03-2018 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 Gene3D G3DSA:3.30.470.20 274 461 1.5E-24 T 28-03-2018 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 204 287 9.8E-7 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 SMART SM01209 203 336 0.0037 T 28-03-2018 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 SUPERFAMILY SSF53244 711 838 1.53E-23 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 Gene3D G3DSA:3.30.1490.20 185 273 1.1E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 Gene3D G3DSA:3.40.1190.10 467 713 6.2E-43 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 Pfam PF02875 Mur ligase family, glutamate ligase domain 711 785 5.5E-11 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS11520 9a19aea13a31f53a4cf28814286b8623 856 SUPERFAMILY SSF53623 433 724 4.58E-42 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS21265 f30481588bd405eef17fc6f16191f608 171 Gene3D G3DSA:2.40.320.10 1 169 4.7E-25 T 28-03-2018 AL504_RS21265 f30481588bd405eef17fc6f16191f608 171 Pfam PF01928 CYTH domain 3 157 7.1E-18 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL504_RS21265 f30481588bd405eef17fc6f16191f608 171 SUPERFAMILY SSF55154 3 167 3.6E-35 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AL504_RS21265 f30481588bd405eef17fc6f16191f608 171 SMART SM01118 2 169 1.8E-16 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 SMART SM00155 284 311 5.4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 SMART SM00155 111 138 1.6E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 Hamap MF_01917 Cardiolipin synthase B [clsB]. 5 382 48.907 T 28-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 Gene3D G3DSA:3.30.870.10 7 180 2.0E-26 T 28-03-2018 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 SUPERFAMILY SSF56024 7 168 8.79E-38 T 28-03-2018 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 Gene3D G3DSA:3.30.870.10 196 358 1.1E-27 T 28-03-2018 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 Pfam PF13091 PLD-like domain 31 162 2.1E-12 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 Pfam PF13091 PLD-like domain 215 338 1.5E-24 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS29080 87eade6177ade124b078e534f8e8df0e 400 SUPERFAMILY SSF56024 180 345 1.95E-35 T 28-03-2018 AL504_RS23270 23be333608ceb986e992e54ddee09487 309 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 294 32.482 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL504_RS23270 23be333608ceb986e992e54ddee09487 309 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 261 1.6E-68 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL504_RS23270 23be333608ceb986e992e54ddee09487 309 Gene3D G3DSA:3.30.230.10 4 159 2.4E-46 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS23270 23be333608ceb986e992e54ddee09487 309 SUPERFAMILY SSF54211 6 156 6.75E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS23270 23be333608ceb986e992e54ddee09487 309 SUPERFAMILY SSF55060 159 277 8.15E-25 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL504_RS23270 23be333608ceb986e992e54ddee09487 309 Gene3D G3DSA:3.30.70.890 161 308 2.2E-24 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL504_RS23270 23be333608ceb986e992e54ddee09487 309 Pfam PF00288 GHMP kinases N terminal domain 87 143 2.5E-10 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL504_RS23270 23be333608ceb986e992e54ddee09487 309 PIRSF PIRSF010376 2 288 2.9E-87 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 SUPERFAMILY SSF64288 71 248 2.51E-44 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 SUPERFAMILY SSF46785 12 92 1.68E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 Gene3D G3DSA:3.40.1410.10 84 252 1.4E-40 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 1.9E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 1.9E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 SMART SM00345 24 83 2.9E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 83 9.4E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 SMART SM00866 105 245 1.5E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 Gene3D G3DSA:1.10.10.10 7 83 1.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01450 edae3ea7ca69386b0f58506b404dc52e 252 Pfam PF07702 UTRA domain 106 241 9.0E-36 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS12745 45b045651fe3edd3420e22b65ee19bb3 287 Gene3D G3DSA:3.40.50.1820 11 279 1.2E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS12745 45b045651fe3edd3420e22b65ee19bb3 287 SUPERFAMILY SSF53474 33 268 4.77E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29910 7baeab24f52c6f61345e748c39f98604 316 SUPERFAMILY SSF53850 105 276 7.94E-14 T 28-03-2018 AL504_RS29910 7baeab24f52c6f61345e748c39f98604 316 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 41 313 4.1E-66 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29910 7baeab24f52c6f61345e748c39f98604 316 Gene3D G3DSA:3.40.190.10 118 223 3.6E-10 T 28-03-2018 AL504_RS29910 7baeab24f52c6f61345e748c39f98604 316 PIRSF PIRSF017082 1 316 2.0E-70 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 SUPERFAMILY SSF55205 9 437 2.49E-120 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 Gene3D G3DSA:3.65.10.10 234 439 9.0E-57 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 14 433 1.4E-117 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 438 1.1E-135 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 440 33.156 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 PIRSF PIRSF000505 8 440 1.5E-132 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 Gene3D G3DSA:3.65.10.10 24 233 2.0E-59 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS11420 b6434e154e4ad2297f2c5d9c3314b474 440 ProSitePatterns PS00885 EPSP synthase signature 2. 350 368 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL504_RS21595 773ac5c0200c9366d80d5d2ed6272fd3 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 172 1.1E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS21595 773ac5c0200c9366d80d5d2ed6272fd3 702 Gene3D G3DSA:2.170.130.10 45 167 1.6E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS21595 773ac5c0200c9366d80d5d2ed6272fd3 702 Pfam PF00593 TonB dependent receptor 337 701 2.1E-43 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS21595 773ac5c0200c9366d80d5d2ed6272fd3 702 SUPERFAMILY SSF56935 320 701 4.76E-100 T 28-03-2018 AL504_RS21595 773ac5c0200c9366d80d5d2ed6272fd3 702 SUPERFAMILY SSF56935 56 286 4.76E-100 T 28-03-2018 AL504_RS21595 773ac5c0200c9366d80d5d2ed6272fd3 702 Gene3D G3DSA:2.40.170.20 168 702 1.0E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS06595 40ca40555b8c19d76810ebd120d5d6d3 374 PIRSF PIRSF000390 1 371 2.7E-124 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS06595 40ca40555b8c19d76810ebd120d5d6d3 374 SUPERFAMILY SSF53383 4 368 6.19E-104 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS06595 40ca40555b8c19d76810ebd120d5d6d3 374 Gene3D G3DSA:3.40.640.10 3 239 2.5E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS06595 40ca40555b8c19d76810ebd120d5d6d3 374 Gene3D G3DSA:3.90.1150.10 240 374 2.8E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS06595 40ca40555b8c19d76810ebd120d5d6d3 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 364 3.7E-123 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 Gene3D G3DSA:2.40.50.260 456 580 1.1E-24 T 28-03-2018 AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 788 944 3.8E-38 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 SUPERFAMILY SSF69279 14 183 7.37E-38 T 28-03-2018 AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 SUPERFAMILY SSF69255 456 550 2.88E-22 T 28-03-2018 AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 Pfam PF05954 Phage late control gene D protein (GPD) 32 324 2.1E-62 T 28-03-2018 AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 620 725 1.2E-30 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 Gene3D G3DSA:3.55.50.10 101 200 9.2E-21 T 28-03-2018 AL504_RS04485 d584f47000054d7b244739a6ee135c4b 977 SUPERFAMILY SSF69279 255 324 7.82E-5 T 28-03-2018 AL504_RS26025 2e7d3841d5d6c9299fc00adde9b1407a 190 Gene3D G3DSA:1.20.1550.10 1 170 2.9E-34 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL504_RS26025 2e7d3841d5d6c9299fc00adde9b1407a 190 Pfam PF02600 Disulfide bond formation protein DsbB 12 97 8.3E-12 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AL504_RS26025 2e7d3841d5d6c9299fc00adde9b1407a 190 SUPERFAMILY SSF158442 16 128 7.72E-22 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL504_RS19680 80b406501f22bb50dd83c5e0802475b6 156 Gene3D G3DSA:1.10.455.10 6 156 2.5E-58 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AL504_RS19680 80b406501f22bb50dd83c5e0802475b6 156 PIRSF PIRSF002122 3 156 2.7E-58 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AL504_RS19680 80b406501f22bb50dd83c5e0802475b6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.494 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL504_RS19680 80b406501f22bb50dd83c5e0802475b6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.7E-66 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL504_RS19680 80b406501f22bb50dd83c5e0802475b6 156 SUPERFAMILY SSF47973 2 149 1.2E-60 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AL504_RS19680 80b406501f22bb50dd83c5e0802475b6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.1E-66 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AL504_RS19680 80b406501f22bb50dd83c5e0802475b6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 Pfam PF00709 Adenylosuccinate synthetase 9 427 1.1E-173 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 Gene3D G3DSA:3.90.170.10 271 435 3.0E-65 T 28-03-2018 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 SUPERFAMILY SSF52540 7 433 6.37E-174 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 137 148 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 10 433 2.4E-174 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 15 22 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 SMART SM00788 8 428 6.5E-293 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 Gene3D G3DSA:3.40.440.10 5 156 6.9E-56 T 28-03-2018 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 Gene3D G3DSA:3.40.440.10 157 270 1.7E-24 T 28-03-2018 AL504_RS09085 2074e234086fd70b012f7d29d1e36088 435 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 435 209.144 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL504_RS29695 988a34f78dd89ba70e6251805d87a5ce 261 Pfam PF01614 Bacterial transcriptional regulator 120 239 1.4E-12 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS29695 988a34f78dd89ba70e6251805d87a5ce 261 SUPERFAMILY SSF46785 2 73 5.31E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29695 988a34f78dd89ba70e6251805d87a5ce 261 SMART SM00346 1 91 9.0E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS29695 988a34f78dd89ba70e6251805d87a5ce 261 Pfam PF09339 IclR helix-turn-helix domain 3 53 1.3E-11 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS29695 988a34f78dd89ba70e6251805d87a5ce 261 SUPERFAMILY SSF55781 75 242 5.56E-33 T 28-03-2018 IPR029016 GAF domain-like AL504_RS29695 988a34f78dd89ba70e6251805d87a5ce 261 Gene3D G3DSA:3.30.450.40 74 245 2.8E-32 T 28-03-2018 IPR029016 GAF domain-like AL504_RS29695 988a34f78dd89ba70e6251805d87a5ce 261 Gene3D G3DSA:1.10.10.10 1 62 1.9E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03555 a128a59a2c5c74aec069d90bdb118854 276 Gene3D G3DSA:1.10.3720.10 4 264 5.4E-34 T 28-03-2018 AL504_RS03555 a128a59a2c5c74aec069d90bdb118854 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 274 1.0E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03555 a128a59a2c5c74aec069d90bdb118854 276 SUPERFAMILY SSF161098 71 256 1.3E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18675 e25c300f273ed276adc252798271c68f 323 Gene3D G3DSA:3.40.190.10 123 233 5.2E-9 T 28-03-2018 AL504_RS18675 e25c300f273ed276adc252798271c68f 323 SUPERFAMILY SSF53850 110 287 3.26E-11 T 28-03-2018 AL504_RS18675 e25c300f273ed276adc252798271c68f 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 319 2.6E-68 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS18675 e25c300f273ed276adc252798271c68f 323 PIRSF PIRSF017082 1 323 1.7E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 Gene3D G3DSA:3.30.70.1430 40 142 2.9E-26 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 Gene3D G3DSA:1.20.1640.10 290 512 1.0E-40 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 Gene3D G3DSA:3.30.2090.10 183 278 2.1E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82866 837 1032 1.44E-41 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82693 677 726 8.02E-25 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82693 813 862 8.02E-25 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82693 573 676 8.55E-25 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82693 138 184 1.96E-22 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82693 277 333 1.96E-22 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 560 577 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 629 643 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.2E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82693 41 134 9.42E-27 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82714 186 275 1.11E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82714 727 811 2.22E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 Gene3D G3DSA:3.30.70.1430 575 676 2.3E-19 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 SUPERFAMILY SSF82866 311 500 1.96E-44 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 Gene3D G3DSA:3.30.70.1440 677 773 5.6E-16 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 Gene3D G3DSA:1.20.1640.10 833 1034 4.6E-36 T 28-03-2018 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1042 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL504_RS07640 f5b1f497de79d9d2ecf82f089c17e145 1059 Pfam PF00873 AcrB/AcrD/AcrF family 4 1032 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 PRINTS PR00301 70kDa heat shock protein signature 186 196 2.0E-6 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 PRINTS PR00301 70kDa heat shock protein signature 120 140 2.0E-6 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 PRINTS PR00301 70kDa heat shock protein signature 32 44 2.0E-6 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 PRINTS PR00301 70kDa heat shock protein signature 4 17 2.0E-6 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 370 384 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 SUPERFAMILY SSF53067 175 243 2.82E-33 T 28-03-2018 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 SUPERFAMILY SSF53067 292 412 2.82E-33 T 28-03-2018 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 180 193 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 Pfam PF00012 Hsp70 protein 275 392 2.7E-12 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 Pfam PF00012 Hsp70 protein 6 226 1.4E-13 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 SUPERFAMILY SSF53067 5 172 1.07E-28 T 28-03-2018 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 Gene3D G3DSA:3.30.420.40 185 394 1.6E-32 T 28-03-2018 AL504_RS30105 6900b4f41affc5a9f6a4ae719bf29995 417 Gene3D G3DSA:3.30.420.40 2 184 2.2E-36 T 28-03-2018 AL504_RS01095 4330f6f047405d537e0c53c15fc3126a 331 Gene3D G3DSA:3.40.190.10 131 242 1.1E-11 T 28-03-2018 AL504_RS01095 4330f6f047405d537e0c53c15fc3126a 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 327 1.5E-86 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01095 4330f6f047405d537e0c53c15fc3126a 331 SUPERFAMILY SSF53850 118 293 4.53E-15 T 28-03-2018 AL504_RS01095 4330f6f047405d537e0c53c15fc3126a 331 PIRSF PIRSF017082 3 331 4.0E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19970 774d0501abe3bcb71beca9376d6501a2 131 Pfam PF00410 Ribosomal protein S8 5 130 3.1E-50 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19970 774d0501abe3bcb71beca9376d6501a2 131 SUPERFAMILY SSF56047 2 130 6.15E-48 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19970 774d0501abe3bcb71beca9376d6501a2 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.516 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19970 774d0501abe3bcb71beca9376d6501a2 131 Gene3D G3DSA:3.30.1370.30 1 67 2.3E-26 T 28-03-2018 AL504_RS19970 774d0501abe3bcb71beca9376d6501a2 131 Gene3D G3DSA:3.30.1490.10 69 129 1.1E-21 T 28-03-2018 AL504_RS19970 774d0501abe3bcb71beca9376d6501a2 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 SMART SM00998 365 444 4.7E-22 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 16 444 8.1E-112 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 SUPERFAMILY SSF48557 11 447 1.57E-112 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 Gene3D G3DSA:1.20.200.10 107 364 1.1E-75 T 28-03-2018 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 443 1.0E-15 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 2.9E-12 T 28-03-2018 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.9E-12 T 28-03-2018 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 2.9E-12 T 28-03-2018 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.9E-12 T 28-03-2018 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 Gene3D G3DSA:1.10.275.10 4 106 5.7E-22 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 Pfam PF00206 Lyase 17 298 1.2E-53 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 Gene3D G3DSA:1.10.40.30 365 443 9.6E-19 T 28-03-2018 AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 4.0E-25 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 4.0E-25 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 4.0E-25 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS23875 38f30669c1cafaa51f6d6d5a2ce8c97d 454 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 4.0E-25 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 Pfam PF12848 ABC transporter 233 309 1.6E-12 T 28-03-2018 IPR032781 ABC-transporter extension domain AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 SUPERFAMILY SSF52540 12 239 2.62E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 SMART SM00382 351 529 2.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 SMART SM00382 31 245 4.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 Gene3D G3DSA:3.40.50.300 12 292 8.0E-54 T 28-03-2018 AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 Gene3D G3DSA:3.40.50.300 293 554 3.7E-60 T 28-03-2018 AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 556 8.9E-292 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 SUPERFAMILY SSF52540 305 533 3.33E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 Pfam PF00005 ABC transporter 22 194 9.4E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS13840 f0d4833f4e2fa9ff79d4668d73c42ce2 557 Pfam PF00005 ABC transporter 343 476 2.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 SUPERFAMILY SSF53850 91 294 9.95E-34 T 28-03-2018 AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.4E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 Pfam PF03466 LysR substrate binding domain 88 292 2.5E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 Gene3D G3DSA:1.10.10.10 1 90 3.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 Gene3D G3DSA:3.40.190.10 179 270 9.2E-23 T 28-03-2018 AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 SUPERFAMILY SSF46785 1 86 9.66E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03640 57516519b4374af0ea82a0ab33798d61 302 Gene3D G3DSA:3.40.190.10 91 178 7.1E-20 T 28-03-2018 AL504_RS04540 d6a20cf58f48fd53712bf4234fd380fe 212 SUPERFAMILY SSF52833 3 87 4.35E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS04540 d6a20cf58f48fd53712bf4234fd380fe 212 Gene3D G3DSA:3.40.30.10 1 93 2.6E-14 T 28-03-2018 AL504_RS04540 d6a20cf58f48fd53712bf4234fd380fe 212 Gene3D G3DSA:1.20.1050.10 94 207 6.7E-4 T 28-03-2018 AL504_RS04540 d6a20cf58f48fd53712bf4234fd380fe 212 SUPERFAMILY SSF47616 83 203 1.02E-7 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS04540 d6a20cf58f48fd53712bf4234fd380fe 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 78 2.9E-9 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 11 221 9.4E-59 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 32 53 9.1E-54 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 81 104 9.1E-54 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 198 221 9.1E-54 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 160 179 9.1E-54 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 58 75 9.1E-54 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 137 160 9.1E-54 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 106 124 9.1E-54 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 PIRSF PIRSF002764 1 225 5.9E-66 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL504_RS07575 f9b9d93e5a7f95accd80290631ac8c62 226 Pfam PF03379 CcmB protein 9 221 3.2E-62 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS20700 afd3b7d12ef5fecf872269f18cf76417 267 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 78 7.9E-21 T 28-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AL504_RS20700 afd3b7d12ef5fecf872269f18cf76417 267 SMART SM00460 158 220 1.2E-16 T 28-03-2018 IPR002931 Transglutaminase-like AL504_RS20700 afd3b7d12ef5fecf872269f18cf76417 267 Gene3D G3DSA:3.90.260.10 155 249 1.2E-4 T 28-03-2018 IPR002931 Transglutaminase-like AL504_RS20700 afd3b7d12ef5fecf872269f18cf76417 267 SUPERFAMILY SSF54001 7 246 9.42E-39 T 28-03-2018 AL504_RS20700 afd3b7d12ef5fecf872269f18cf76417 267 Pfam PF01841 Transglutaminase-like superfamily 130 217 1.0E-22 T 28-03-2018 IPR002931 Transglutaminase-like AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 Gene3D G3DSA:1.10.1040.10 178 301 2.1E-34 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 SUPERFAMILY SSF48179 177 300 6.91E-41 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 SUPERFAMILY SSF51735 15 177 7.12E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 16 176 2.7E-46 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 19 32 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 Gene3D G3DSA:3.40.50.720 15 177 1.3E-36 T 28-03-2018 AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 PIRSF PIRSF000103 10 301 4.5E-72 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS14930 6ec401b7d91a401946c42330ce508907 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 179 298 3.5E-34 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL504_RS23015 73fd71bcee79f999b5062abf7ab648c5 656 Pfam PF10722 Putative bacterial sensory transduction regulator 524 649 5.1E-14 T 28-03-2018 IPR019660 Putative sensory transduction regulator YbjN AL504_RS23015 73fd71bcee79f999b5062abf7ab648c5 656 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 472 2.8E-113 T 28-03-2018 IPR010352 Protein of unknown function DUF945 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 Gene3D G3DSA:3.40.190.10 181 260 6.5E-14 T 28-03-2018 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.3E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 Gene3D G3DSA:1.10.10.10 2 78 4.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 Gene3D G3DSA:3.40.190.10 79 180 1.6E-21 T 28-03-2018 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 SUPERFAMILY SSF53850 88 272 1.76E-32 T 28-03-2018 AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 Pfam PF03466 LysR substrate binding domain 86 265 1.2E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS16545 9e0f51db442799a12a7d3a95a5067dc3 293 SUPERFAMILY SSF46785 7 110 1.69E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25680 268ace60825da10d517183516cc5f2a1 431 Pfam PF13379 NMT1-like family 56 306 5.8E-105 T 28-03-2018 AL504_RS25680 268ace60825da10d517183516cc5f2a1 431 SUPERFAMILY SSF53850 59 297 5.16E-30 T 28-03-2018 AL504_RS25680 268ace60825da10d517183516cc5f2a1 431 Gene3D G3DSA:3.40.190.10 171 386 8.1E-41 T 28-03-2018 AL504_RS25680 268ace60825da10d517183516cc5f2a1 431 Gene3D G3DSA:3.40.190.10 57 165 1.2E-7 T 28-03-2018 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 Gene3D G3DSA:3.40.50.720 1 202 7.8E-62 T 28-03-2018 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 SUPERFAMILY SSF51735 1 194 9.08E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 2.6E-32 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 Gene3D G3DSA:1.20.5.100 205 227 7.7E-15 T 28-03-2018 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 SUPERFAMILY SSF48179 204 300 6.05E-34 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 185 8.2E-64 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 1.3E-135 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 Gene3D G3DSA:3.40.50.720 228 436 1.9E-72 T 28-03-2018 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 SMART SM00984 320 424 3.0E-52 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 2.2E-38 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 PIRSF PIRSF000124 1 439 3.6E-147 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 PIRSF PIRSF500134 1 440 2.3E-191 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL504_RS17745 ee40dc71d08921c1be116d067b2508a9 440 SUPERFAMILY SSF52413 305 434 1.15E-38 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 533 4.7E-43 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Gene3D G3DSA:3.30.930.10 233 535 1.0E-118 T 28-03-2018 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 PRINTS PR01047 Threonyl-tRNA synthetase signature 511 524 1.4E-52 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 550 1.4E-52 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 1.4E-52 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 PRINTS PR01047 Threonyl-tRNA synthetase signature 468 496 1.4E-52 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 1.4E-52 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 77 635 3.2E-214 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Pfam PF03129 Anticodon binding domain 545 634 5.5E-19 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 SUPERFAMILY SSF55186 69 245 9.03E-69 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 71 638 34.169 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 175 223 2.6E-15 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Gene3D G3DSA:3.10.20.30 1 69 1.9E-17 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Pfam PF02824 TGS domain 2 66 2.3E-8 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 SUPERFAMILY SSF81271 2 66 2.45E-11 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 SMART SM00863 174 223 7.2E-25 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Gene3D G3DSA:3.40.50.800 537 645 1.4E-26 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 Gene3D G3DSA:3.30.980.10 72 232 1.7E-45 T 28-03-2018 AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 SUPERFAMILY SSF52954 534 637 1.13E-29 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS08415 40ab1fe203ebec605b8f51c429bb6ff2 650 SUPERFAMILY SSF55681 247 530 1.3E-99 T 28-03-2018 AL504_RS10105 e3dbe604dc1a45bc745d8abac42f25be 388 Gene3D G3DSA:2.40.50.100 179 379 1.5E-6 T 28-03-2018 AL504_RS10105 e3dbe604dc1a45bc745d8abac42f25be 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 379 3.0E-77 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS10105 e3dbe604dc1a45bc745d8abac42f25be 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 298 2.6E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS10105 e3dbe604dc1a45bc745d8abac42f25be 388 SUPERFAMILY SSF111369 68 303 8.63E-58 T 28-03-2018 AL504_RS10105 e3dbe604dc1a45bc745d8abac42f25be 388 Gene3D G3DSA:2.40.50.100 75 147 7.6E-19 T 28-03-2018 AL504_RS05615 1b81081ee2bd3a4408688a85400618e1 325 SUPERFAMILY SSF53850 114 287 7.91E-11 T 28-03-2018 AL504_RS05615 1b81081ee2bd3a4408688a85400618e1 325 Gene3D G3DSA:3.40.190.10 125 234 1.3E-8 T 28-03-2018 AL504_RS05615 1b81081ee2bd3a4408688a85400618e1 325 PIRSF PIRSF017082 1 323 3.0E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS05615 1b81081ee2bd3a4408688a85400618e1 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 317 4.4E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 SUPERFAMILY SSF46785 1 86 4.59E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 Gene3D G3DSA:3.40.190.10 88 176 1.1E-23 T 28-03-2018 AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 Pfam PF03466 LysR substrate binding domain 87 296 2.4E-49 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 Gene3D G3DSA:3.40.190.10 177 274 3.9E-30 T 28-03-2018 AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 Gene3D G3DSA:1.10.10.10 1 82 4.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04710 7fe41ad45200a09e3a89f69e9cdd6b6c 316 SUPERFAMILY SSF53850 88 298 4.34E-43 T 28-03-2018 AL504_RS17695 2da39245df7c51580c4c412dba6a80ec 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 6 331 2.7E-36 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS17695 2da39245df7c51580c4c412dba6a80ec 343 PIRSF PIRSF005632 1 343 1.7E-201 T 28-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AL504_RS17695 2da39245df7c51580c4c412dba6a80ec 343 SUPERFAMILY SSF51726 8 341 1.44E-67 T 28-03-2018 AL504_RS17695 2da39245df7c51580c4c412dba6a80ec 343 Gene3D G3DSA:3.20.20.210 1 343 9.2E-89 T 28-03-2018 AL504_RS30925 a5809cb5f7f9ce3d493cedbe3e1fab4c 68 Gene3D G3DSA:3.30.1580.10 16 59 7.0E-8 T 28-03-2018 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 SUPERFAMILY SSF46785 4 117 9.99E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 Gene3D G3DSA:3.40.190.10 182 268 1.3E-17 T 28-03-2018 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 8.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 8.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 8.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 Pfam PF03466 LysR substrate binding domain 95 301 1.7E-32 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 2.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 SUPERFAMILY SSF53850 96 302 4.89E-36 T 28-03-2018 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 Gene3D G3DSA:3.40.190.10 97 181 4.3E-17 T 28-03-2018 AL504_RS29770 4bf827a93df6e1f589207bff9a341d3b 312 Gene3D G3DSA:1.10.10.10 7 93 9.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11455 592bbe0c773a3dbd2687ad01ea12e41b 242 Gene3D G3DSA:3.40.50.150 1 242 6.6E-52 T 28-03-2018 AL504_RS11455 592bbe0c773a3dbd2687ad01ea12e41b 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 19 237 7.2E-85 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL504_RS11455 592bbe0c773a3dbd2687ad01ea12e41b 242 SUPERFAMILY SSF53335 21 223 4.78E-49 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS11455 592bbe0c773a3dbd2687ad01ea12e41b 242 Pfam PF13489 Methyltransferase domain 59 212 3.6E-26 T 28-03-2018 AL504_RS11455 592bbe0c773a3dbd2687ad01ea12e41b 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 17 242 37.41 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL504_RS12325 189a1bfc5cdfd7b65af55b8c27bc8258 295 Gene3D G3DSA:1.10.3470.10 5 288 6.8E-45 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS12325 189a1bfc5cdfd7b65af55b8c27bc8258 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 283 2.3E-40 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 Gene3D G3DSA:3.40.50.2300 2 130 1.2E-18 T 28-03-2018 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 Pfam PF00072 Response regulator receiver domain 12 123 1.3E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 SMART SM00421 150 207 3.5E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.2E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.2E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.2E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 9.0E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 SUPERFAMILY SSF52172 10 132 2.13E-18 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 SUPERFAMILY SSF46894 144 208 7.48E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 Gene3D G3DSA:1.10.10.10 134 213 4.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22610 b118defdfcb8b81735c3d65a60ee6589 218 SMART SM00448 9 123 3.0E-11 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 71 79 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 SUPERFAMILY SSF53681 6 108 9.81E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 Gene3D G3DSA:3.40.50.1860 3 116 3.1E-27 T 28-03-2018 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 Gene3D G3DSA:3.40.50.1860 117 264 1.7E-39 T 28-03-2018 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 215 5.0E-31 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 227 4.7E-56 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 SUPERFAMILY SSF53681 110 258 2.45E-30 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS25385 df994b0a9b9fb735b7afaee3a5735455 267 Hamap MF_00258 Glutamate racemase [murI]. 5 256 33.207 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS27025 2063c18eaea50c1fcc33763070009ae9 296 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 273 2.2E-31 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS27025 2063c18eaea50c1fcc33763070009ae9 296 Gene3D G3DSA:1.10.3470.10 1 290 4.5E-38 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 Pfam PF00459 Inositol monophosphatase family 17 262 1.3E-41 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 Gene3D G3DSA:3.40.190.80 161 279 1.9E-14 T 28-03-2018 AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 222 246 8.5E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 94 110 8.5E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 8.5E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 8.5E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 Gene3D G3DSA:3.30.540.10 1 160 1.5E-35 T 28-03-2018 AL504_RS28510 a9720360a9a29fb7785ed9fce5a6b771 284 SUPERFAMILY SSF56655 11 274 3.14E-58 T 28-03-2018 AL504_RS26580 116200dcaa6f23fe2b0be139797018ac 252 Pfam PF06912 Protein of unknown function (DUF1275) 22 238 1.2E-34 T 28-03-2018 IPR010699 Protein of unknown function DUF1275 AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 Gene3D G3DSA:1.10.10.10 7 93 3.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 SUPERFAMILY SSF46785 18 90 3.04E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 3.1E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 SMART SM00345 22 81 1.1E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 Gene3D G3DSA:3.40.640.10 128 367 9.6E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 SUPERFAMILY SSF53383 106 465 1.46E-76 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 Gene3D G3DSA:3.90.1150.10 368 468 1.2E-10 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 Pfam PF00155 Aminotransferase class I and II 142 420 5.6E-18 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS24340 b5e554b5b70d4cb9d1a9ba9155051242 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS04795 88c1f1c56cf41b643e6eea646aabc77e 232 SUPERFAMILY SSF51182 1 231 3.46E-79 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS04795 88c1f1c56cf41b643e6eea646aabc77e 232 Pfam PF02678 Pirin 10 119 5.6E-37 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL504_RS04795 88c1f1c56cf41b643e6eea646aabc77e 232 PIRSF PIRSF006232 1 230 1.8E-55 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL504_RS04795 88c1f1c56cf41b643e6eea646aabc77e 232 Gene3D G3DSA:2.60.120.10 11 131 3.5E-49 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS04795 88c1f1c56cf41b643e6eea646aabc77e 232 Gene3D G3DSA:2.60.120.10 132 232 6.9E-32 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 Gene3D G3DSA:3.10.20.30 228 325 7.1E-20 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 SUPERFAMILY SSF63380 2 104 3.4E-18 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 247 316 2.0E-8 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 144 153 2.2E-9 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 51 65 2.2E-9 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 196 204 2.2E-9 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 28 38 2.2E-9 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 SUPERFAMILY SSF54292 218 323 1.44E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 SUPERFAMILY SSF52343 102 233 1.57E-28 T 28-03-2018 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 Pfam PF00175 Oxidoreductase NAD-binding domain 120 209 8.3E-7 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 Gene3D G3DSA:3.40.50.80 111 227 2.5E-22 T 28-03-2018 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 Gene3D G3DSA:2.40.30.10 2 105 3.0E-15 T 28-03-2018 AL504_RS13905 2ca1f9f1bf48304d605ecbb74d9f3a01 325 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 274 282 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL504_RS05055 253e57b9565a9cab72eccf295115dd03 398 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 316 2.9E-106 T 28-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS05055 253e57b9565a9cab72eccf295115dd03 398 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 78 1.7E-37 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS05055 253e57b9565a9cab72eccf295115dd03 398 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 53.625 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS05055 253e57b9565a9cab72eccf295115dd03 398 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 1.2E-28 T 28-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS28765 475023a2b1eb95e9abf366b338e52e53 593 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 302 6.7E-33 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS28765 475023a2b1eb95e9abf366b338e52e53 593 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 566 587 9.3E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS28765 475023a2b1eb95e9abf366b338e52e53 593 Gene3D G3DSA:1.10.3470.10 10 307 7.7E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS28765 475023a2b1eb95e9abf366b338e52e53 593 Pfam PF00005 ABC transporter 369 516 5.2E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28765 475023a2b1eb95e9abf366b338e52e53 593 Gene3D G3DSA:3.40.50.300 338 591 2.7E-50 T 28-03-2018 AL504_RS28765 475023a2b1eb95e9abf366b338e52e53 593 SUPERFAMILY SSF52540 351 589 2.15E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28765 475023a2b1eb95e9abf366b338e52e53 593 SMART SM00382 377 565 8.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 453 7.9E-191 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 SMART SM00116 156 204 2.6E-6 T 28-03-2018 IPR000644 CBS domain AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 SMART SM00116 95 142 3.6E-11 T 28-03-2018 IPR000644 CBS domain AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 SUPERFAMILY SSF54631 94 201 7.44E-28 T 28-03-2018 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 87.115 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 Gene3D G3DSA:3.20.20.70 1 483 1.1E-116 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 SUPERFAMILY SSF51412 215 476 1.57E-125 T 28-03-2018 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 SUPERFAMILY SSF51412 2 89 1.57E-125 T 28-03-2018 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 1.1E-163 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 PIRSF PIRSF000130 1 486 6.2E-206 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 SMART SM01240 6 472 0.0 T 28-03-2018 AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 Pfam PF00571 CBS domain 95 138 1.0E-9 T 28-03-2018 IPR000644 CBS domain AL504_RS01130 1a45cc32cbbcc12218d5e69674961719 486 Pfam PF00571 CBS domain 149 201 1.2E-4 T 28-03-2018 IPR000644 CBS domain AL504_RS16400 9787bd43f20c1b9a718c08edf0a4f8eb 288 Gene3D G3DSA:3.40.190.10 39 161 1.3E-14 T 28-03-2018 AL504_RS16400 9787bd43f20c1b9a718c08edf0a4f8eb 288 SMART SM00062 54 279 0.0096 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS16400 9787bd43f20c1b9a718c08edf0a4f8eb 288 Gene3D G3DSA:3.40.190.10 162 239 2.1E-6 T 28-03-2018 AL504_RS16400 9787bd43f20c1b9a718c08edf0a4f8eb 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 273 6.7E-20 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS16400 9787bd43f20c1b9a718c08edf0a4f8eb 288 SUPERFAMILY SSF53850 55 274 1.09E-26 T 28-03-2018 AL504_RS24430 965e869b395e58a7c7aaa0393d754a6c 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.0E-12 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24430 965e869b395e58a7c7aaa0393d754a6c 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.0E-12 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24430 965e869b395e58a7c7aaa0393d754a6c 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.0E-12 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24430 965e869b395e58a7c7aaa0393d754a6c 104 Pfam PF12840 Helix-turn-helix domain 5 63 1.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24430 965e869b395e58a7c7aaa0393d754a6c 104 SUPERFAMILY SSF46785 5 95 7.49E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24430 965e869b395e58a7c7aaa0393d754a6c 104 SMART SM00418 5 83 1.8E-22 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24430 965e869b395e58a7c7aaa0393d754a6c 104 Gene3D G3DSA:1.10.10.10 3 104 3.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 Gene3D G3DSA:3.90.380.10 140 381 1.5E-33 T 28-03-2018 AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 Gene3D G3DSA:2.20.25.10 79 139 3.7E-17 T 28-03-2018 AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 74 94 2.3E-5 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 2.3E-5 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 SUPERFAMILY SSF55961 162 378 1.49E-45 T 28-03-2018 AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 SUPERFAMILY SSF50022 7 156 1.96E-28 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 177 380 1.2E-34 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL504_RS10935 ee826d5d24fdd5782836011ea5a5f780 382 Pfam PF00355 Rieske [2Fe-2S] domain 43 136 1.1E-8 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS06515 802059b79b88181318741fd8540445a3 567 SUPERFAMILY SSF58104 251 535 7.59E-78 T 28-03-2018 AL504_RS06515 802059b79b88181318741fd8540445a3 567 SMART SM00304 231 283 8.1E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06515 802059b79b88181318741fd8540445a3 567 Gene3D G3DSA:1.20.120.30 25 205 2.5E-24 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS06515 802059b79b88181318741fd8540445a3 567 Gene3D G3DSA:1.10.287.950 344 535 3.6E-51 T 28-03-2018 AL504_RS06515 802059b79b88181318741fd8540445a3 567 SMART SM00283 284 531 6.3E-98 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06515 802059b79b88181318741fd8540445a3 567 SUPERFAMILY SSF47170 32 179 3.14E-16 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06515 802059b79b88181318741fd8540445a3 567 Pfam PF00672 HAMP domain 231 279 2.4E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06515 802059b79b88181318741fd8540445a3 567 Pfam PF02203 Tar ligand binding domain homologue 4 178 2.3E-21 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06515 802059b79b88181318741fd8540445a3 567 Gene3D G3DSA:1.10.287.1060 259 343 7.3E-4 T 28-03-2018 AL504_RS06515 802059b79b88181318741fd8540445a3 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 459 488 1.1E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06515 802059b79b88181318741fd8540445a3 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 1.1E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06515 802059b79b88181318741fd8540445a3 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 1.1E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06515 802059b79b88181318741fd8540445a3 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 1.1E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06515 802059b79b88181318741fd8540445a3 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 1.1E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06515 802059b79b88181318741fd8540445a3 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 499 4.3E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Gene3D G3DSA:3.40.50.300 103 221 6.3E-17 T 28-03-2018 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 SMART SM00382 103 283 7.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 282 295 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Pfam PF02978 Signal peptide binding domain 341 441 2.3E-31 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 SUPERFAMILY SSF52540 42 370 2.25E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 SMART SM00963 1 86 5.0E-33 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Gene3D G3DSA:1.20.120.140 222 323 6.3E-34 T 28-03-2018 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Gene3D G3DSA:1.10.260.30 341 446 2.2E-35 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.3E-19 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 453 33.347 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 443 1.2E-169 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 SMART SM00962 104 309 3.4E-112 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 SUPERFAMILY SSF47446 311 445 9.03E-44 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Pfam PF00448 SRP54-type protein, GTPase domain 104 308 6.2E-68 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS22445 266ec317416dfde18f3d9106532744c1 468 Gene3D G3DSA:1.20.120.140 1 90 7.9E-28 T 28-03-2018 AL504_RS11200 c90bd14f81cfde98c08ae958d2762b1e 554 Gene3D G3DSA:3.40.605.10 86 325 1.0E-35 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS11200 c90bd14f81cfde98c08ae958d2762b1e 554 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 3 554 2.9E-292 T 28-03-2018 IPR011975 Phenylacetic acid degradation protein PaaN2 AL504_RS11200 c90bd14f81cfde98c08ae958d2762b1e 554 Pfam PF00171 Aldehyde dehydrogenase family 90 501 5.8E-36 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS11200 c90bd14f81cfde98c08ae958d2762b1e 554 SUPERFAMILY SSF53720 73 532 3.8E-59 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS11200 c90bd14f81cfde98c08ae958d2762b1e 554 Gene3D G3DSA:3.40.309.10 326 525 1.9E-28 T 28-03-2018 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 Gene3D G3DSA:3.30.930.10 131 592 1.2E-105 T 28-03-2018 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 Pfam PF02938 GAD domain 309 406 1.4E-27 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 564 1.4E-106 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 Pfam PF01336 OB-fold nucleic acid binding domain 18 101 3.7E-17 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 Gene3D G3DSA:2.40.50.140 1 107 1.2E-24 T 28-03-2018 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 590 33.548 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 588 7.4E-242 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.4E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 480 496 1.4E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 524 538 1.4E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.4E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 SUPERFAMILY SSF55261 291 416 9.32E-42 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 SUPERFAMILY SSF50249 1 104 2.48E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 SUPERFAMILY SSF55681 430 591 1.75E-103 T 28-03-2018 AL504_RS20250 1d2368fe5a3acc6f3fccc2d09da3adb0 595 SUPERFAMILY SSF55681 110 292 1.75E-103 T 28-03-2018 AL504_RS11000 82359cfa1e26e0473556ef84f97131db 376 Gene3D G3DSA:1.10.10.10 39 86 0.0065 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11000 82359cfa1e26e0473556ef84f97131db 376 Pfam PF13565 Homeodomain-like domain 39 113 1.9E-14 T 28-03-2018 AL504_RS11000 82359cfa1e26e0473556ef84f97131db 376 SUPERFAMILY SSF46689 14 117 3.49E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS11000 82359cfa1e26e0473556ef84f97131db 376 Gene3D G3DSA:3.30.420.10 127 338 4.0E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS11000 82359cfa1e26e0473556ef84f97131db 376 SUPERFAMILY SSF53098 131 301 1.9E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS11000 82359cfa1e26e0473556ef84f97131db 376 Gene3D G3DSA:1.10.10.60 14 38 3.5E-5 T 28-03-2018 AL504_RS11000 82359cfa1e26e0473556ef84f97131db 376 Pfam PF00665 Integrase core domain 135 255 1.4E-24 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 474 1.8E-160 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PIRSF PIRSF000350 1 474 2.0E-81 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 SUPERFAMILY SSF51905 1 347 1.54E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 Gene3D G3DSA:3.50.50.60 1 180 4.4E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 337 2.0E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 3.3E-40 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 324 3.3E-40 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.3E-40 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 3.3E-40 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 289 3.3E-40 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 Gene3D G3DSA:3.40.50.720 181 343 9.9E-34 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 317 324 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 459 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 288 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 1.6E-75 T 28-03-2018 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 Gene3D G3DSA:3.30.390.30 344 473 3.6E-43 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 465 1.8E-38 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL504_RS11680 d34cb6862714b313ca75f9ed3adef5fc 475 SUPERFAMILY SSF55424 352 473 5.5E-42 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 Pfam PF14579 Helix-hairpin-helix motif 809 907 7.0E-28 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 Gene3D G3DSA:2.40.50.140 979 1076 3.1E-14 T 28-03-2018 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 295 736 4.0E-175 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 SMART SM00481 12 79 1.6E-23 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 Gene3D G3DSA:1.10.150.280 839 904 3.8E-9 T 28-03-2018 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 11 1033 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 Gene3D G3DSA:3.20.20.140 10 260 3.4E-36 T 28-03-2018 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 SUPERFAMILY SSF89550 11 267 2.35E-11 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 Pfam PF01336 OB-fold nucleic acid binding domain 999 1074 6.2E-11 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL504_RS09915 d7a447c34f71ed0ab9e58fb6275014f8 1163 Pfam PF02811 PHP domain 13 177 6.6E-43 T 28-03-2018 IPR004013 PHP domain GO:0003824 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 SMART SM00530 24 79 6.5E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 Hamap MF_00109 Shikimate kinase [aroK]. 128 295 20.232 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 Gene3D G3DSA:1.10.260.40 10 89 4.4E-14 T 28-03-2018 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 SUPERFAMILY SSF52540 130 288 2.47E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 Gene3D G3DSA:3.40.50.300 120 300 9.4E-23 T 28-03-2018 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 Pfam PF01202 Shikimate kinase 137 286 2.4E-32 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 Pfam PF01381 Helix-turn-helix 26 79 3.6E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 PRINTS PR01100 Shikimate kinase family signature 202 211 1.0E-11 T 28-03-2018 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 PRINTS PR01100 Shikimate kinase family signature 131 146 1.0E-11 T 28-03-2018 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 PRINTS PR01100 Shikimate kinase family signature 183 191 1.0E-11 T 28-03-2018 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 PRINTS PR01100 Shikimate kinase family signature 155 168 1.0E-11 T 28-03-2018 AL504_RS26140 0106574dcbb1d449846350de83fe4bc9 302 SUPERFAMILY SSF47413 15 85 1.32E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 SUPERFAMILY SSF46689 414 498 3.45E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 Gene3D G3DSA:3.40.50.2300 2 147 3.5E-31 T 28-03-2018 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 Pfam PF00158 Sigma-54 interaction domain 144 307 2.1E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 SMART SM00448 2 113 8.1E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 SUPERFAMILY SSF52540 145 384 5.32E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 Pfam PF02954 Bacterial regulatory protein, Fis family 456 495 2.9E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 390 2.6E-186 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 SUPERFAMILY SSF52172 2 185 5.41E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 Gene3D G3DSA:3.40.50.300 148 313 5.8E-28 T 28-03-2018 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 Gene3D G3DSA:1.10.8.60 314 385 5.3E-22 T 28-03-2018 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 478 498 1.4E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 461 478 1.4E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 SMART SM00382 161 304 5.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 Gene3D G3DSA:1.10.10.60 386 498 1.9E-23 T 28-03-2018 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS04805 406e40196bd71e75c007cf7dacaefb19 500 Pfam PF00072 Response regulator receiver domain 4 113 1.6E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 Gene3D G3DSA:3.20.20.70 26 332 1.6E-25 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 PIRSF PIRSF005963 2 334 1.8E-129 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 29 86 3.1E-8 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 SMART SM00729 97 306 5.4E-15 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 SUPERFAMILY SSF102114 65 330 1.31E-66 T 28-03-2018 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 Hamap MF_00206 Lipoyl synthase [lipA]. 49 335 154.079 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 Pfam PF04055 Radical SAM superfamily 104 263 1.9E-13 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS20525 ce56c2d67d6bb908fc034d8933c99119 335 TIGRFAM TIGR00510 lipA: lipoyl synthase 46 328 8.1E-130 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 SUPERFAMILY SSF49503 176 318 1.4E-54 T 28-03-2018 IPR008972 Cupredoxin AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 SUPERFAMILY SSF49503 120 147 1.4E-54 T 28-03-2018 IPR008972 Cupredoxin AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 Gene3D G3DSA:1.10.760.10 259 368 9.0E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 Gene3D G3DSA:2.60.40.420 125 258 1.2E-47 T 28-03-2018 IPR008972 Cupredoxin AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 Gene3D G3DSA:1.10.287.90 30 123 4.2E-24 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 286 360 3.1E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 SUPERFAMILY SSF46626 275 370 1.1E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 128 253 5.4E-39 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 102 122 2.6E-40 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 174 195 2.6E-40 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 90 102 2.6E-40 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 198 218 2.6E-40 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 218 235 2.6E-40 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 236 253 2.6E-40 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 143 2.6E-40 T 28-03-2018 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 SUPERFAMILY SSF81464 29 122 2.29E-25 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 31 113 7.7E-13 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 199 247 - T 28-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17820 849250ccef10cd1efd6a12bdd0ce656a 385 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 42 264 1.0E-58 T 28-03-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 43 53 - T 28-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 PRINTS PR00355 Adrenodoxin signature 61 75 3.3E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 PRINTS PR00355 Adrenodoxin signature 84 92 3.3E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 PRINTS PR00355 Adrenodoxin signature 43 53 3.3E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.3E-52 T 28-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 SUPERFAMILY SSF54292 8 109 7.49E-28 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 19 93 4.3E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS31285 e2c7c0f7985bd6c29a99184452f57e21 113 Gene3D G3DSA:3.10.20.30 14 113 1.8E-27 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 Gene3D G3DSA:1.10.1400.10 611 759 8.3E-29 T 28-03-2018 AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 Pfam PF01804 Penicillin amidase 46 850 6.0E-149 T 28-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 Gene3D G3DSA:1.10.439.10 41 189 7.1E-46 T 28-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 Gene3D G3DSA:1.10.287.150 192 239 4.4E-19 T 28-03-2018 AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 PIRSF PIRSF001227 5 860 8.3E-115 T 28-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 Gene3D G3DSA:3.60.20.10 266 388 3.8E-19 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 Gene3D G3DSA:3.60.20.10 760 853 2.7E-5 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 Gene3D G3DSA:3.60.20.10 398 610 2.1E-35 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 SUPERFAMILY SSF56235 45 232 2.11E-209 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS07215 18f07205500acc6d2e875136dff40e8c 863 SUPERFAMILY SSF56235 299 861 2.11E-209 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 SUPERFAMILY SSF52172 1 108 1.57E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 PIRSF PIRSF000876 1 349 5.4E-138 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 Gene3D G3DSA:3.40.50.2300 1 142 2.7E-28 T 28-03-2018 AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 Gene3D G3DSA:3.40.50.180 151 350 3.3E-78 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 SUPERFAMILY SSF52738 158 346 3.01E-71 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 346 41.529 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 SMART SM00448 4 123 1.3E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 Pfam PF01339 CheB methylesterase 162 341 1.9E-61 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS06505 07795a3a8c8d80a2f61dd4a8109af640 352 Pfam PF00072 Response regulator receiver domain 6 108 7.7E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 Gene3D G3DSA:3.40.190.10 180 262 4.4E-20 T 28-03-2018 AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 SUPERFAMILY SSF46785 1 110 2.18E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 Gene3D G3DSA:3.40.190.10 90 179 1.1E-19 T 28-03-2018 AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 SUPERFAMILY SSF53850 91 288 2.28E-36 T 28-03-2018 AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 Gene3D G3DSA:1.10.10.10 1 83 1.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 Pfam PF03466 LysR substrate binding domain 91 288 1.2E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03580 a0bd66ee514a83b22abef3bdeea29f45 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04630 891c103fd05c6d972e457db2038e19e4 293 Pfam PF06629 MltA-interacting protein MipA 64 292 1.1E-36 T 28-03-2018 IPR010583 MltA-interacting MipA AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 186 1.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 216 4.6E-61 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 192 4.2E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 192 3.3E-32 T 28-03-2018 IPR023214 HAD-like domain AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.9E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.9E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.9E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 Gene3D G3DSA:3.40.50.1000 99 235 3.1E-32 T 28-03-2018 IPR023214 HAD-like domain AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 Gene3D G3DSA:1.10.150.240 19 98 5.1E-22 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL504_RS17120 3ebcd2d016cf601c1a3477423c8281e7 235 SUPERFAMILY SSF56784 4 216 1.84E-55 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21005 a39c4bb6cbf4ed66af4b87879218820d 642 Gene3D G3DSA:3.90.1310.10 31 247 1.7E-48 T 28-03-2018 AL504_RS21005 a39c4bb6cbf4ed66af4b87879218820d 642 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 237 9.2E-42 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL504_RS21005 a39c4bb6cbf4ed66af4b87879218820d 642 SUPERFAMILY SSF56519 54 251 1.83E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL504_RS21005 a39c4bb6cbf4ed66af4b87879218820d 642 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 18 612 5.4E-224 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 AL504_RS21005 a39c4bb6cbf4ed66af4b87879218820d 642 SUPERFAMILY SSF56601 252 613 4.7E-100 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS21005 a39c4bb6cbf4ed66af4b87879218820d 642 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 607 4.3E-64 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL504_RS21005 a39c4bb6cbf4ed66af4b87879218820d 642 Gene3D G3DSA:3.40.710.10 248 617 2.3E-95 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82693 38 131 1.92E-27 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82693 135 182 3.49E-26 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82693 274 330 3.49E-26 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82866 834 1029 1.28E-46 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.0E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82693 674 723 7.59E-29 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82693 810 858 7.59E-29 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 Gene3D G3DSA:1.20.1640.10 286 510 3.3E-45 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82866 296 497 4.58E-50 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 Gene3D G3DSA:3.30.70.1430 38 140 4.9E-29 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 Gene3D G3DSA:3.30.2090.10 180 275 5.0E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 Gene3D G3DSA:3.30.70.1440 674 770 8.6E-22 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 Gene3D G3DSA:3.30.70.1430 568 670 5.4E-17 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82693 566 671 6.28E-27 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 Gene3D G3DSA:1.20.1640.10 813 1031 7.0E-41 T 28-03-2018 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82714 724 811 6.28E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS06700 cd86abcbc5bea81b0fbe4ca628d84e9e 1060 SUPERFAMILY SSF82714 182 271 1.01E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02885 7aff2280ae5eb8fc87d6b53255c71b80 372 SUPERFAMILY SSF63380 113 227 4.6E-8 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS02885 7aff2280ae5eb8fc87d6b53255c71b80 372 Gene3D G3DSA:2.40.30.10 107 229 1.7E-27 T 28-03-2018 AL504_RS02885 7aff2280ae5eb8fc87d6b53255c71b80 372 Pfam PF08021 Siderophore-interacting FAD-binding domain 117 228 1.2E-28 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AL504_RS02885 7aff2280ae5eb8fc87d6b53255c71b80 372 Pfam PF04954 Siderophore-interacting protein 234 354 7.4E-34 T 28-03-2018 IPR007037 Siderophore-interacting protein AL504_RS02885 7aff2280ae5eb8fc87d6b53255c71b80 372 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 13 99 5.7E-14 T 28-03-2018 IPR014543 Uncharacterised conserved protein UCP028291 AL504_RS02885 7aff2280ae5eb8fc87d6b53255c71b80 372 Gene3D G3DSA:3.40.50.80 230 367 9.6E-38 T 28-03-2018 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 SUPERFAMILY SSF47005 163 208 5.75E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 Pfam PF00364 Biotin-requiring enzyme 5 77 1.3E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 SUPERFAMILY SSF51230 2 96 6.67E-24 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 Gene3D G3DSA:4.10.320.10 164 213 9.5E-16 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 Pfam PF02817 e3 binding domain 169 203 1.9E-10 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 Gene3D G3DSA:3.30.559.10 214 456 1.6E-76 T 28-03-2018 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 SUPERFAMILY SSF52777 219 454 3.6E-76 T 28-03-2018 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 225 454 7.3E-78 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 Gene3D G3DSA:3.90.1170.30 2 46 1.0E-14 T 28-03-2018 AL504_RS06900 645f994b55e9495cfc4585b86c2e9ea3 456 Gene3D G3DSA:2.40.50.100 47 141 0.0059 T 28-03-2018 AL504_RS24310 d325669e5678f3fefb31216a36a42783 132 SUPERFAMILY SSF50346 11 132 7.85E-28 T 28-03-2018 IPR011033 PRC-barrel-like AL504_RS24310 d325669e5678f3fefb31216a36a42783 132 Pfam PF05239 PRC-barrel domain 21 98 2.6E-16 T 28-03-2018 IPR027275 PRC-barrel domain AL504_RS24310 d325669e5678f3fefb31216a36a42783 132 Gene3D G3DSA:3.90.50.10 5 132 3.1E-34 T 28-03-2018 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 Pfam PF01479 S4 domain 31 77 9.5E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 SUPERFAMILY SSF55120 92 318 2.88E-65 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 Gene3D G3DSA:3.30.2350.10 98 321 6.3E-67 T 28-03-2018 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 Pfam PF00849 RNA pseudouridylate synthase 107 255 6.1E-31 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 SUPERFAMILY SSF55174 30 81 7.65E-9 T 28-03-2018 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 SMART SM00363 31 98 3.3E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 145 159 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 27 318 1.0E-77 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS12215 25f815a519d137ecccfb1f5a535297ba 321 Gene3D G3DSA:3.10.290.10 19 90 4.4E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS10570 424a855db4851c0c1ab39b139d64e2b8 469 SUPERFAMILY SSF53686 1 466 3.34E-154 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS10570 424a855db4851c0c1ab39b139d64e2b8 469 Gene3D G3DSA:3.40.50.1100 107 204 1.1E-12 T 28-03-2018 AL504_RS10570 424a855db4851c0c1ab39b139d64e2b8 469 Gene3D G3DSA:3.40.50.1100 205 434 2.2E-83 T 28-03-2018 AL504_RS10570 424a855db4851c0c1ab39b139d64e2b8 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 105 407 1.6E-10 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS10570 424a855db4851c0c1ab39b139d64e2b8 469 Gene3D G3DSA:3.90.1380.10 1 89 6.1E-32 T 28-03-2018 IPR029144 Threonine synthase, N-terminal AL504_RS10570 424a855db4851c0c1ab39b139d64e2b8 469 TIGRFAM TIGR00260 thrC: threonine synthase 98 430 1.6E-72 T 28-03-2018 IPR004450 Threonine synthase-like AL504_RS10570 424a855db4851c0c1ab39b139d64e2b8 469 Pfam PF14821 Threonine synthase N terminus 2 79 8.7E-29 T 28-03-2018 IPR029144 Threonine synthase, N-terminal AL504_RS11935 eb7c0c864500aa8047f8c2afc9df6a89 217 Pfam PF01144 Coenzyme A transferase 7 205 6.1E-40 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS11935 eb7c0c864500aa8047f8c2afc9df6a89 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 212 1.2E-96 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AL504_RS11935 eb7c0c864500aa8047f8c2afc9df6a89 217 Gene3D G3DSA:3.40.1080.10 3 216 1.3E-68 T 28-03-2018 AL504_RS11935 eb7c0c864500aa8047f8c2afc9df6a89 217 SUPERFAMILY SSF100950 3 214 2.07E-71 T 28-03-2018 AL504_RS11935 eb7c0c864500aa8047f8c2afc9df6a89 217 SMART SM00882 6 206 2.4E-81 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS11935 eb7c0c864500aa8047f8c2afc9df6a89 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 SUPERFAMILY SSF53328 89 284 3.4E-63 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 PIRSF PIRSF036480 3 284 2.1E-114 T 28-03-2018 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 Gene3D G3DSA:3.40.50.170 94 284 6.6E-57 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 6.8E-58 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 6.8E-58 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 6.8E-58 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 6.8E-58 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 6.8E-58 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 6.8E-58 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 Pfam PF13740 ACT domain 7 81 9.2E-8 T 28-03-2018 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 283 5.9E-107 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 SUPERFAMILY SSF55021 6 85 1.21E-19 T 28-03-2018 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 283 48.418 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 Gene3D G3DSA:3.30.70.260 1 93 1.3E-29 T 28-03-2018 AL504_RS14090 86574f2e9ee9e0656576b0a549a8e373 284 Pfam PF00551 Formyl transferase 89 265 1.2E-39 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82693 59 154 2.27E-17 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 Gene3D G3DSA:3.30.70.1430 59 163 2.2E-28 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82714 204 284 7.06E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 PRINTS PR00702 Acriflavin resistance protein family signature 456 479 8.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 8.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 PRINTS PR00702 Acriflavin resistance protein family signature 481 504 8.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 PRINTS PR00702 Acriflavin resistance protein family signature 57 75 8.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 PRINTS PR00702 Acriflavin resistance protein family signature 349 372 8.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 8.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82866 317 507 3.4E-32 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82866 811 1034 7.59E-48 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 Gene3D G3DSA:1.20.1640.10 817 1032 1.9E-34 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 Gene3D G3DSA:1.20.1640.10 300 520 1.3E-29 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 Gene3D G3DSA:3.30.2090.10 739 815 2.1E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 Gene3D G3DSA:3.30.2090.10 200 286 3.7E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 Gene3D G3DSA:3.30.70.1430 576 738 2.3E-12 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82693 155 201 4.92E-18 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82693 287 337 4.92E-18 T 28-03-2018 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82714 729 813 1.27E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 Pfam PF00873 AcrB/AcrD/AcrF family 25 1027 4.3E-163 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12680 ceffe3a9db2ef39bc653b00b327fa7fa 1057 SUPERFAMILY SSF82693 575 656 9.94E-6 T 28-03-2018 AL504_RS05570 86f862b7e766c278bd46c618a085d0e0 210 Pfam PF13394 4Fe-4S single cluster domain 25 122 1.0E-5 T 28-03-2018 AL504_RS05570 86f862b7e766c278bd46c618a085d0e0 210 Gene3D G3DSA:3.20.20.70 26 202 7.1E-13 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS05570 86f862b7e766c278bd46c618a085d0e0 210 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 210 2.8E-107 T 28-03-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL504_RS05570 86f862b7e766c278bd46c618a085d0e0 210 SUPERFAMILY SSF102114 45 137 1.83E-8 T 28-03-2018 AL504_RS05570 86f862b7e766c278bd46c618a085d0e0 210 Pfam PF04055 Radical SAM superfamily 45 122 7.2E-7 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS05570 86f862b7e766c278bd46c618a085d0e0 210 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 210 32.21 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL504_RS05570 86f862b7e766c278bd46c618a085d0e0 210 PIRSF PIRSF000370 1 210 1.2E-35 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL504_RS23210 8a6794ddc14ebba472a6a1c41a2f529d 631 PIRSF PIRSF005091 31 620 3.3E-86 T 28-03-2018 IPR012160 Lipoteichoic acid synthase-like AL504_RS23210 8a6794ddc14ebba472a6a1c41a2f529d 631 SUPERFAMILY SSF53649 269 580 5.23E-63 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS23210 8a6794ddc14ebba472a6a1c41a2f529d 631 Gene3D G3DSA:3.40.720.10 260 543 3.9E-47 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS23210 8a6794ddc14ebba472a6a1c41a2f529d 631 Pfam PF00884 Sulfatase 272 537 5.0E-39 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 SUPERFAMILY SSF46689 220 271 1.43E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 Pfam PF01965 DJ-1/PfpI family 53 182 7.1E-9 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 SMART SM00342 237 320 1.1E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 Gene3D G3DSA:2.60.120.10 213 279 1.7E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 Pfam PF12833 Helix-turn-helix domain 243 322 3.5E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 Gene3D G3DSA:3.40.50.880 4 212 2.4E-33 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 SUPERFAMILY SSF52317 5 203 4.89E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 Gene3D G3DSA:1.10.10.60 280 324 2.2E-10 T 28-03-2018 AL504_RS29555 bab6369479b534e1dd493decd0b089ba 324 SUPERFAMILY SSF46689 273 323 1.03E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS29275 9c14552ced830b5db9241a9fa91c3936 344 Gene3D G3DSA:1.20.140.10 196 323 1.5E-6 T 28-03-2018 AL504_RS29275 9c14552ced830b5db9241a9fa91c3936 344 Gene3D G3DSA:2.40.110.10 72 194 7.8E-9 T 28-03-2018 AL504_RS29275 9c14552ced830b5db9241a9fa91c3936 344 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 196 316 2.3E-4 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS29275 9c14552ced830b5db9241a9fa91c3936 344 SUPERFAMILY SSF56645 28 191 1.57E-12 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS04300 0ca247d6a19f804d008ca5632f5b0545 344 Gene3D G3DSA:3.30.66.10 30 95 1.7E-33 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal AL504_RS04300 0ca247d6a19f804d008ca5632f5b0545 344 Gene3D G3DSA:1.20.120.380 248 324 6.7E-26 T 28-03-2018 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 AL504_RS04300 0ca247d6a19f804d008ca5632f5b0545 344 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 99 298 7.8E-28 T 28-03-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AL504_RS04300 0ca247d6a19f804d008ca5632f5b0545 344 SUPERFAMILY SSF56349 93 315 2.5E-65 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS04300 0ca247d6a19f804d008ca5632f5b0545 344 Gene3D G3DSA:3.90.15.10 96 242 5.7E-37 T 28-03-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AL504_RS04300 0ca247d6a19f804d008ca5632f5b0545 344 SUPERFAMILY SSF55869 34 97 1.19E-21 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 Pfam PF00384 Molybdopterin oxidoreductase 112 492 2.2E-21 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 PIRSF PIRSF000144 1 755 0.0 T 28-03-2018 AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 Pfam PF01568 Molydopterin dinucleotide binding domain 641 747 2.7E-15 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 Gene3D G3DSA:3.40.50.740 113 277 1.9E-33 T 28-03-2018 AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 16 752 1.1E-294 T 28-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 SUPERFAMILY SSF50692 637 754 1.67E-20 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 Gene3D G3DSA:2.40.40.20 603 754 8.7E-26 T 28-03-2018 AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 SUPERFAMILY SSF53706 51 628 4.19E-145 T 28-03-2018 AL504_RS23645 1417c0d78ee4077a15072a6be398a75d 755 Gene3D G3DSA:3.40.50.740 328 602 6.7E-47 T 28-03-2018 AL504_RS21360 95760543c50a865f5e7b97bfa957ed55 331 SUPERFAMILY SSF53850 119 292 6.51E-10 T 28-03-2018 AL504_RS21360 95760543c50a865f5e7b97bfa957ed55 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 328 1.3E-72 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21360 95760543c50a865f5e7b97bfa957ed55 331 Gene3D G3DSA:3.40.190.10 112 242 9.8E-12 T 28-03-2018 AL504_RS21360 95760543c50a865f5e7b97bfa957ed55 331 PIRSF PIRSF017082 1 331 2.8E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 385 391 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 Pfam PF00702 haloacid dehalogenase-like hydrolase 379 670 5.2E-18 T 28-03-2018 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 Pfam PF00689 Cation transporting ATPase, C-terminus 741 912 5.5E-14 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 44 922 0.0 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 SMART SM00831 37 110 7.9E-21 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 SUPERFAMILY SSF81653 172 282 1.18E-24 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 Gene3D G3DSA:2.70.150.10 46 284 5.1E-41 T 28-03-2018 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 Pfam PF00690 Cation transporter/ATPase, N-terminus 41 105 7.6E-17 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 SUPERFAMILY SSF81665 41 157 2.88E-100 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 SUPERFAMILY SSF81665 284 377 2.88E-100 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 SUPERFAMILY SSF81665 705 920 2.88E-100 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 280 403 1.7E-20 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 626 735 1.7E-27 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 Pfam PF00122 E1-E2 ATPase 154 363 3.6E-44 T 28-03-2018 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 876 897 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 417 430 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 714 729 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 764 777 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 826 847 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 732 743 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 784 800 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 296 312 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 PRINTS PR01836 Magnesium-transporting ATPase signature 313 332 3.0E-72 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 SUPERFAMILY SSF56784 507 752 2.1E-35 T 28-03-2018 IPR023214 HAD-like domain AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 SUPERFAMILY SSF56784 381 401 2.1E-35 T 28-03-2018 IPR023214 HAD-like domain AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 Gene3D G3DSA:3.40.1110.10 346 559 7.9E-35 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL504_RS12850 d68b6a10c8041776eb792bc956845989 923 Gene3D G3DSA:1.20.1110.10 588 919 1.6E-50 T 28-03-2018 AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 188 216 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 SUPERFAMILY SSF51735 54 291 5.28E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 201 220 3.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 189 3.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 140 3.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 Gene3D G3DSA:3.40.50.720 14 294 1.2E-76 T 28-03-2018 AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 71 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 220 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 239 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 256 276 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 140 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 191 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04315 5dba19b4139c55ed1de228e699ba4bd6 295 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 62 289 6.8E-61 T 28-03-2018 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 SUPERFAMILY SSF48452 63 206 1.37E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 5 807 1.2E-243 T 28-03-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 Pfam PF13429 Tetratricopeptide repeat 88 211 1.7E-7 T 28-03-2018 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 Gene3D G3DSA:1.25.40.10 386 587 1.8E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 SMART SM00028 84 117 1.8 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 SMART SM00028 152 185 5.2 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 Gene3D G3DSA:1.25.40.10 129 367 2.8E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS08095 486887f252c01e80a20378e4266ba537 807 Gene3D G3DSA:1.25.40.10 3 128 2.4E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.3E-6 T 28-03-2018 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 326 2.3E-6 T 28-03-2018 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 SUPERFAMILY SSF51905 5 219 1.89E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 SUPERFAMILY SSF51905 312 369 1.89E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 Pfam PF01266 FAD dependent oxidoreductase 7 351 1.2E-62 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 Gene3D G3DSA:3.30.9.10 161 311 2.4E-31 T 28-03-2018 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 SUPERFAMILY SSF54373 240 308 7.19E-5 T 28-03-2018 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 327 3.7E-5 T 28-03-2018 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.7E-5 T 28-03-2018 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 Gene3D G3DSA:3.50.50.60 2 66 1.8E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07125 509189e9912e57b1fe8b39fdcbdfd83b 379 Gene3D G3DSA:3.30.9.10 86 160 2.0E-7 T 28-03-2018 AL504_RS16595 754ceb53b054261ac413be21386421f1 423 SUPERFAMILY SSF53474 41 401 2.73E-102 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16595 754ceb53b054261ac413be21386421f1 423 Pfam PF00561 alpha/beta hydrolase fold 77 392 4.4E-35 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS16595 754ceb53b054261ac413be21386421f1 423 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 47 402 1.1E-138 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AL504_RS16595 754ceb53b054261ac413be21386421f1 423 PIRSF PIRSF000443 14 413 7.5E-144 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AL504_RS16595 754ceb53b054261ac413be21386421f1 423 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 34 405 48.885 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AL504_RS16595 754ceb53b054261ac413be21386421f1 423 Gene3D G3DSA:3.40.50.1820 57 406 4.3E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 SUPERFAMILY SSF52141 19 240 2.16E-74 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 Pfam PF03167 Uracil DNA glycosylase superfamily 64 227 6.4E-23 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 20 239 34.575 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 SMART SM00987 63 228 5.7E-32 T 28-03-2018 AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 22 232 2.7E-69 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 Gene3D G3DSA:3.40.470.10 4 241 1.2E-81 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 71 80 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS20740 b7da658dd096e880e62bfe42c556ffcf 253 SMART SM00986 63 228 5.7E-32 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 14 499 2.7E-109 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 Pfam PF02875 Mur ligase family, glutamate ligase domain 365 435 2.2E-5 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 12 502 32.197 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 SUPERFAMILY SSF53244 363 502 5.72E-44 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 SUPERFAMILY SSF51984 14 111 2.88E-13 T 28-03-2018 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 SUPERFAMILY SSF53623 129 272 5.49E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 SUPERFAMILY SSF53623 304 361 5.49E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 Gene3D G3DSA:3.90.190.20 369 501 1.6E-37 T 28-03-2018 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 Pfam PF08245 Mur ligase middle domain 136 250 5.7E-25 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 Gene3D G3DSA:3.40.1190.10 119 367 4.4E-57 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14765 f87dda915bec49063bc189ffcfe23c8b 510 Gene3D G3DSA:3.40.50.720 14 111 6.9E-15 T 28-03-2018 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 SUPERFAMILY SSF52172 39 166 1.71E-21 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 SMART SM00448 39 154 1.4E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 Gene3D G3DSA:3.40.50.2300 38 170 3.3E-23 T 28-03-2018 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 ProSitePatterns PS00622 LuxR-type HTH domain signature. 198 225 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 226 2.1E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 214 2.1E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 198 2.1E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 SUPERFAMILY SSF46894 174 240 1.94E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 SMART SM00421 181 238 5.2E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 Pfam PF00072 Response regulator receiver domain 41 154 2.5E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 Gene3D G3DSA:1.10.10.10 175 242 7.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08425 6dbe46f98bcd717b34daa0dbcf6d0f5f 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 183 237 1.2E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 Gene3D G3DSA:1.20.120.30 40 157 7.9E-17 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS23265 a191573d81bd494754deb69631e31a46 532 Pfam PF00672 HAMP domain 209 258 8.7E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 Pfam PF02203 Tar ligand binding domain homologue 1 165 9.6E-32 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 SMART SM00283 262 509 3.8E-95 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 8.6E-70 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.6E-70 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 61 76 8.6E-70 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 360 387 8.6E-70 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 418 8.6E-70 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 8.6E-70 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 SMART SM00304 209 261 1.3E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 SUPERFAMILY SSF47170 26 172 3.79E-19 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 477 2.9E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 Gene3D G3DSA:1.10.287.950 312 513 5.6E-50 T 28-03-2018 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 Gene3D G3DSA:1.10.287.950 158 311 1.0E-13 T 28-03-2018 AL504_RS23265 a191573d81bd494754deb69631e31a46 532 SUPERFAMILY SSF58104 229 510 5.1E-74 T 28-03-2018 AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 SUPERFAMILY SSF51735 108 282 1.11E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 122 172 3.3E-9 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 282 31.021 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 SUPERFAMILY SSF53223 8 107 2.42E-28 T 28-03-2018 AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 Gene3D G3DSA:3.40.50.720 117 285 1.4E-30 T 28-03-2018 AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 95 5.6E-21 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 Gene3D G3DSA:3.40.50.10860 3 116 6.2E-35 T 28-03-2018 AL504_RS15855 6d03adddff9f418b9195eb929de24325 287 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 10 283 8.6E-69 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL504_RS28550 28b769020ebb0abf6f8c8b26aa48724e 745 Gene3D G3DSA:3.90.76.10 50 292 4.7E-28 T 28-03-2018 AL504_RS28550 28b769020ebb0abf6f8c8b26aa48724e 745 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 171 605 3.0E-48 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS28550 28b769020ebb0abf6f8c8b26aa48724e 745 SUPERFAMILY SSF53850 36 133 7.06E-83 T 28-03-2018 AL504_RS28550 28b769020ebb0abf6f8c8b26aa48724e 745 SUPERFAMILY SSF53850 242 690 7.06E-83 T 28-03-2018 AL504_RS28550 28b769020ebb0abf6f8c8b26aa48724e 745 SUPERFAMILY SSF53850 169 202 7.06E-83 T 28-03-2018 AL504_RS28550 28b769020ebb0abf6f8c8b26aa48724e 745 Gene3D G3DSA:3.10.105.10 425 660 1.5E-43 T 28-03-2018 AL504_RS28550 28b769020ebb0abf6f8c8b26aa48724e 745 Gene3D G3DSA:3.40.190.10 293 424 6.9E-13 T 28-03-2018 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 Gene3D G3DSA:3.40.50.300 1 21 0.051 T 28-03-2018 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 Hamap MF_00328 Guanylate kinase [gmk]. 4 187 35.947 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 SMART SM00072 5 187 1.3E-58 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 Gene3D G3DSA:3.40.50.300 82 186 5.9E-30 T 28-03-2018 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 Gene3D G3DSA:3.40.50.300 22 49 6.9E-4 T 28-03-2018 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 4.2E-68 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 Gene3D G3DSA:3.30.63.10 50 81 1.9E-22 T 28-03-2018 AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 Pfam PF00625 Guanylate kinase 8 185 2.3E-43 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL504_RS04905 b5ab3ab40a68f5c6bee52ad1bcdd1be0 210 SUPERFAMILY SSF52540 4 189 4.52E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19800 493cebf3b07e5ed569c578f7007065cb 560 Gene3D G3DSA:3.50.50.60 5 559 1.2E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19800 493cebf3b07e5ed569c578f7007065cb 560 Pfam PF00890 FAD binding domain 17 70 1.0E-4 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS19800 493cebf3b07e5ed569c578f7007065cb 560 Pfam PF05199 GMC oxidoreductase 413 540 1.5E-29 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL504_RS19800 493cebf3b07e5ed569c578f7007065cb 560 SUPERFAMILY SSF51905 14 269 2.53E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19800 493cebf3b07e5ed569c578f7007065cb 560 SUPERFAMILY SSF51905 489 549 2.53E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19800 493cebf3b07e5ed569c578f7007065cb 560 SUPERFAMILY SSF54373 371 470 3.69E-5 T 28-03-2018 AL504_RS06000 1033eaf0ed6b68c7af8bba8be32aff89 201 Gene3D G3DSA:1.10.357.10 75 201 8.1E-14 T 28-03-2018 AL504_RS06000 1033eaf0ed6b68c7af8bba8be32aff89 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 9.5E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06000 1033eaf0ed6b68c7af8bba8be32aff89 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 9.5E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06000 1033eaf0ed6b68c7af8bba8be32aff89 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 66 5.3E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06000 1033eaf0ed6b68c7af8bba8be32aff89 201 Gene3D G3DSA:1.10.10.60 1 74 3.5E-17 T 28-03-2018 AL504_RS06000 1033eaf0ed6b68c7af8bba8be32aff89 201 SUPERFAMILY SSF48498 100 199 1.29E-7 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS06000 1033eaf0ed6b68c7af8bba8be32aff89 201 SUPERFAMILY SSF46689 13 89 4.36E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 SUPERFAMILY SSF51905 7 178 7.41E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 SUPERFAMILY SSF51905 272 378 7.41E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 Pfam PF01494 FAD binding domain 7 346 4.8E-59 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 Gene3D G3DSA:3.40.30.20 345 530 2.4E-4 T 28-03-2018 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.5E-34 T 28-03-2018 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.5E-34 T 28-03-2018 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 336 2.5E-34 T 28-03-2018 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 2.5E-34 T 28-03-2018 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 2.5E-34 T 28-03-2018 AL504_RS14435 833145ba1d3d43553c7dda6153626e14 544 Gene3D G3DSA:3.50.50.60 5 344 5.5E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 75 97 3.5E-5 T 28-03-2018 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 3.5E-5 T 28-03-2018 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 202 220 3.5E-5 T 28-03-2018 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 3.5E-5 T 28-03-2018 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 Gene3D G3DSA:1.20.1250.20 8 201 7.0E-33 T 28-03-2018 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 SUPERFAMILY SSF103473 248 420 1.11E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 SUPERFAMILY SSF103473 469 498 1.11E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 SUPERFAMILY SSF103473 11 202 1.11E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 Gene3D G3DSA:1.20.1250.20 251 502 5.3E-19 T 28-03-2018 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 Pfam PF07690 Major Facilitator Superfamily 16 406 2.2E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS21715 87f9b0a6be9765b292b1a3772dac6fe1 508 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS30305 4687641cac4009d6616d0ebdf72662f9 323 PIRSF PIRSF017082 1 322 2.1E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS30305 4687641cac4009d6616d0ebdf72662f9 323 SUPERFAMILY SSF53850 112 285 3.03E-13 T 28-03-2018 AL504_RS30305 4687641cac4009d6616d0ebdf72662f9 323 Gene3D G3DSA:3.40.190.10 148 296 1.7E-12 T 28-03-2018 AL504_RS30305 4687641cac4009d6616d0ebdf72662f9 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 319 6.8E-91 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11785 2e91ea72a7b20bf429d545df09004c72 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 292 3.1E-126 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL504_RS11785 2e91ea72a7b20bf429d545df09004c72 296 Gene3D G3DSA:3.20.20.60 5 296 1.3E-89 T 28-03-2018 AL504_RS11785 2e91ea72a7b20bf429d545df09004c72 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 293 48.329 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL504_RS11785 2e91ea72a7b20bf429d545df09004c72 296 SUPERFAMILY SSF51621 5 291 3.68E-101 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS11785 2e91ea72a7b20bf429d545df09004c72 296 ProSitePatterns PS00161 Isocitrate lyase signature. 122 127 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL504_RS11785 2e91ea72a7b20bf429d545df09004c72 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 255 9.7E-53 T 28-03-2018 AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 SUPERFAMILY SSF69279 25 208 1.15E-50 T 28-03-2018 AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 Gene3D G3DSA:2.40.50.230 414 510 2.1E-31 T 28-03-2018 IPR006531 Gp5 N-terminal AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 566 670 5.5E-29 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 710 868 4.2E-35 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 24 514 1.5E-106 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 37 514 6.7E-89 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 Gene3D G3DSA:3.55.50.10 114 212 1.5E-30 T 28-03-2018 AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 Pfam PF05954 Phage late control gene D protein (GPD) 43 354 4.4E-86 T 28-03-2018 AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 SUPERFAMILY SSF69255 408 510 3.92E-25 T 28-03-2018 AL504_RS01950 53b9e4423e449ef5e5b7a6c149fc2d42 899 SUPERFAMILY SSF69279 228 397 7.31E-21 T 28-03-2018 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 Gene3D G3DSA:3.20.20.70 402 781 1.2E-115 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 Gene3D G3DSA:3.50.50.60 1 395 5.5E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 SUPERFAMILY SSF51905 1 152 1.85E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 SUPERFAMILY SSF51905 254 358 1.85E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 415 744 6.0E-63 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 SUPERFAMILY SSF51395 412 764 5.36E-116 T 28-03-2018 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.8E-8 T 28-03-2018 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 1.8E-8 T 28-03-2018 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 1.8E-8 T 28-03-2018 AL504_RS16030 33408709b12c56d5f6be4bdb9c4fbd1b 783 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 131 146 1.8E-8 T 28-03-2018 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Gene3D G3DSA:3.90.199.10 34 285 5.1E-119 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Gene3D G3DSA:3.90.199.10 286 375 4.3E-10 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 9.8E-156 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 SMART SM00434 11 506 1.7E-290 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 852 0.0 T 28-03-2018 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 853 24.058 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 SUPERFAMILY SSF101904 544 865 1.96E-111 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 SUPERFAMILY SSF56719 30 523 1.44E-178 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 599 648 1.4E-9 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 656 699 3.0E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 704 749 3.4E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 594 1.8E-9 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 805 851 1.4E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 755 801 2.1E-12 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Gene3D G3DSA:1.10.268.10 376 504 6.8E-47 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS11445 140fbb6fb472eb726b9dd33978cce558 886 Gene3D G3DSA:2.120.10.90 544 869 1.5E-130 T 28-03-2018 AL504_RS22295 29971a80f7d86d45a5c06b1c5fec3d9e 85 Pfam PF13560 Helix-turn-helix domain 19 75 6.6E-8 T 28-03-2018 AL504_RS22295 29971a80f7d86d45a5c06b1c5fec3d9e 85 Gene3D G3DSA:1.10.260.40 9 77 3.1E-9 T 28-03-2018 AL504_RS22295 29971a80f7d86d45a5c06b1c5fec3d9e 85 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 19 74 2.0E-21 T 28-03-2018 IPR017507 Transcription regulator, HipB-like AL504_RS22295 29971a80f7d86d45a5c06b1c5fec3d9e 85 SUPERFAMILY SSF47413 15 76 4.79E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS01370 308ccefa8562b8f26f26bb8d7b6cd08c 400 SUPERFAMILY SSF103473 12 386 1.06E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01370 308ccefa8562b8f26f26bb8d7b6cd08c 400 Gene3D G3DSA:1.20.1250.20 204 385 1.1E-11 T 28-03-2018 AL504_RS01370 308ccefa8562b8f26f26bb8d7b6cd08c 400 Pfam PF07690 Major Facilitator Superfamily 24 356 1.2E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01370 308ccefa8562b8f26f26bb8d7b6cd08c 400 Gene3D G3DSA:1.20.1250.20 10 203 7.2E-21 T 28-03-2018 AL504_RS14095 f15fc4e54cbda653b314352f985f5cad 301 Gene3D G3DSA:3.40.190.10 89 178 5.8E-12 T 28-03-2018 AL504_RS14095 f15fc4e54cbda653b314352f985f5cad 301 SUPERFAMILY SSF46785 5 112 3.1E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14095 f15fc4e54cbda653b314352f985f5cad 301 SUPERFAMILY SSF53850 91 297 7.06E-40 T 28-03-2018 AL504_RS14095 f15fc4e54cbda653b314352f985f5cad 301 Gene3D G3DSA:1.10.10.10 3 84 1.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14095 f15fc4e54cbda653b314352f985f5cad 301 Gene3D G3DSA:3.40.190.10 179 265 1.2E-22 T 28-03-2018 AL504_RS14095 f15fc4e54cbda653b314352f985f5cad 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14095 f15fc4e54cbda653b314352f985f5cad 301 Pfam PF03466 LysR substrate binding domain 90 294 7.3E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 SUPERFAMILY SSF56645 2 240 7.72E-82 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 3.6E-50 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 Gene3D G3DSA:1.20.140.10 216 375 2.3E-59 T 28-03-2018 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 2.6E-25 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 115 6.9E-35 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 PIRSF PIRSF016578 219 373 3.4E-10 T 28-03-2018 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 PIRSF PIRSF016578 3 194 2.3E-10 T 28-03-2018 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 Gene3D G3DSA:1.10.540.10 1 118 5.0E-37 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 SUPERFAMILY SSF47203 225 375 4.99E-57 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS05370 5abd8971a07f33b6bb84a76f9b9f8f22 375 Gene3D G3DSA:2.40.110.10 119 215 3.4E-39 T 28-03-2018 AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 Pfam PF03466 LysR substrate binding domain 89 285 1.3E-46 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.0E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 SUPERFAMILY SSF46785 1 111 7.03E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 SUPERFAMILY SSF53850 90 285 3.52E-43 T 28-03-2018 AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.6E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.6E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.6E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 Gene3D G3DSA:1.10.10.10 1 84 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 Gene3D G3DSA:3.40.190.10 182 265 5.9E-25 T 28-03-2018 AL504_RS05710 31ccf708d84886c4e298856f9f867c1c 317 Gene3D G3DSA:3.40.190.10 89 181 2.5E-23 T 28-03-2018 AL504_RS14080 0dff8a1477dc8616a178520e39a4b50f 174 SUPERFAMILY SSF50475 9 160 8.34E-46 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS14080 0dff8a1477dc8616a178520e39a4b50f 174 Pfam PF01613 Flavin reductase like domain 18 160 3.4E-34 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS14080 0dff8a1477dc8616a178520e39a4b50f 174 Gene3D G3DSA:2.30.110.10 5 169 1.6E-39 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS14080 0dff8a1477dc8616a178520e39a4b50f 174 SMART SM00903 17 162 3.0E-57 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 SUPERFAMILY SSF49503 29 181 7.01E-40 T 28-03-2018 IPR008972 Cupredoxin AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 PRINTS PR00695 Copper containing nitrite reductase signature 54 72 1.5E-61 T 28-03-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 PRINTS PR00695 Copper containing nitrite reductase signature 116 135 1.5E-61 T 28-03-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 PRINTS PR00695 Copper containing nitrite reductase signature 99 116 1.5E-61 T 28-03-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 PRINTS PR00695 Copper containing nitrite reductase signature 141 156 1.5E-61 T 28-03-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 PRINTS PR00695 Copper containing nitrite reductase signature 81 97 1.5E-61 T 28-03-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 PRINTS PR00695 Copper containing nitrite reductase signature 159 175 1.5E-61 T 28-03-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 SUPERFAMILY SSF49503 185 353 7.4E-74 T 28-03-2018 IPR008972 Cupredoxin AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 Pfam PF00394 Multicopper oxidase 193 344 3.3E-20 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 Gene3D G3DSA:2.60.40.420 177 343 2.2E-18 T 28-03-2018 IPR008972 Cupredoxin AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 31 355 9.2E-163 T 28-03-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 Gene3D G3DSA:2.60.40.420 19 176 7.4E-30 T 28-03-2018 IPR008972 Cupredoxin AL504_RS07815 086d04ef152aae0b977d8b8720e4a5b4 360 Pfam PF07732 Multicopper oxidase 69 177 5.7E-13 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AL504_RS03680 86b1a76867c3a0713926dad46a4d0e20 302 Pfam PF13714 Phosphoenolpyruvate phosphomutase 19 261 2.2E-48 T 28-03-2018 AL504_RS03680 86b1a76867c3a0713926dad46a4d0e20 302 SUPERFAMILY SSF51621 6 296 3.05E-92 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS03680 86b1a76867c3a0713926dad46a4d0e20 302 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 14 297 1.9E-119 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL504_RS03680 86b1a76867c3a0713926dad46a4d0e20 302 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 11 299 46.807 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL504_RS03680 86b1a76867c3a0713926dad46a4d0e20 302 ProSitePatterns PS00161 Isocitrate lyase signature. 128 133 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL504_RS03680 86b1a76867c3a0713926dad46a4d0e20 302 Gene3D G3DSA:3.20.20.60 11 301 2.1E-84 T 28-03-2018 AL504_RS30195 b764b6400cb68105fd550d5abaa8bbbe 322 Gene3D G3DSA:3.40.190.10 96 183 9.7E-17 T 28-03-2018 AL504_RS30195 b764b6400cb68105fd550d5abaa8bbbe 322 Gene3D G3DSA:3.40.190.10 184 276 4.1E-9 T 28-03-2018 AL504_RS30195 b764b6400cb68105fd550d5abaa8bbbe 322 SUPERFAMILY SSF46785 7 87 2.83E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30195 b764b6400cb68105fd550d5abaa8bbbe 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 4.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30195 b764b6400cb68105fd550d5abaa8bbbe 322 Pfam PF03466 LysR substrate binding domain 95 302 1.1E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS30195 b764b6400cb68105fd550d5abaa8bbbe 322 SUPERFAMILY SSF53850 97 305 1.09E-32 T 28-03-2018 AL504_RS30195 b764b6400cb68105fd550d5abaa8bbbe 322 Gene3D G3DSA:1.10.10.10 3 90 7.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14670 7a3a940f9c4d7ff290c54c5efe4bb807 203 SUPERFAMILY SSF110857 33 145 7.98E-12 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL504_RS14670 7a3a940f9c4d7ff290c54c5efe4bb807 203 Gene3D G3DSA:3.10.490.10 26 199 5.6E-29 T 28-03-2018 AL504_RS14670 7a3a940f9c4d7ff290c54c5efe4bb807 203 Pfam PF04752 ChaC-like protein 33 196 5.3E-43 T 28-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 AL504_RS02795 c464e4da8cbb6e8bec1103496435ed89 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 244 8.1E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02795 c464e4da8cbb6e8bec1103496435ed89 247 SUPERFAMILY SSF161098 54 236 1.01E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02795 c464e4da8cbb6e8bec1103496435ed89 247 Gene3D G3DSA:1.10.3720.10 2 247 1.3E-27 T 28-03-2018 AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 Pfam PF00563 EAL domain 150 382 2.6E-52 T 28-03-2018 IPR001633 EAL domain AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 Gene3D G3DSA:3.20.20.450 145 402 4.7E-64 T 28-03-2018 IPR001633 EAL domain AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 SUPERFAMILY SSF141868 149 394 4.45E-59 T 28-03-2018 IPR001633 EAL domain AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 Gene3D G3DSA:3.40.50.2300 3 139 1.7E-23 T 28-03-2018 AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 SUPERFAMILY SSF52172 8 131 1.04E-22 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 SMART SM00448 7 124 1.2E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 SMART SM00052 143 388 3.5E-53 T 28-03-2018 IPR001633 EAL domain AL504_RS28180 02a9883c06a39afd027d7646224cf6ad 430 Pfam PF00072 Response regulator receiver domain 10 120 2.6E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS21420 a75568cbb90d268f567533a25973e1cb 637 Pfam PF01964 Radical SAM ThiC family 139 598 9.8E-198 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL504_RS21420 a75568cbb90d268f567533a25973e1cb 637 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 137 602 1.3E-212 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL504_RS21420 a75568cbb90d268f567533a25973e1cb 637 Pfam PF13667 ThiC-associated domain 21 98 2.7E-31 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL504_RS21420 a75568cbb90d268f567533a25973e1cb 637 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 137 604 56.076 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Gene3D G3DSA:3.30.1300.30 585 683 9.9E-23 T 28-03-2018 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Pfam PF03895 YadA-like membrane anchor domain 623 683 6.6E-15 T 28-03-2018 IPR005594 YadA-like, C-terminal AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 327 363 0.0073 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 420 458 2.3E-4 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 560 578 3.1E-6 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 114 152 4.2E-4 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 SUPERFAMILY SSF54523 571 683 2.04E-23 T 28-03-2018 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Gene3D G3DSA:2.150.10.10 453 584 7.0E-25 T 28-03-2018 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 SUPERFAMILY SSF101967 473 579 3.01E-21 T 28-03-2018 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Gene3D G3DSA:2.150.10.10 2 141 6.9E-4 T 28-03-2018 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Gene3D G3DSA:1.20.5.170 343 394 4.0E-6 T 28-03-2018 AL504_RS28965 2e29960db1de611b0a15622734dec5e3 683 Gene3D G3DSA:2.150.10.10 142 342 0.047 T 28-03-2018 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 Gene3D G3DSA:1.10.1860.10 1 88 1.6E-36 T 28-03-2018 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 Gene3D G3DSA:1.20.1220.12 589 724 6.1E-46 T 28-03-2018 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 Pfam PF01274 Malate synthase 18 696 3.0E-176 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 Gene3D G3DSA:3.20.20.360 89 214 1.2E-21 T 28-03-2018 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 Gene3D G3DSA:3.20.20.360 218 588 7.9E-104 T 28-03-2018 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 SUPERFAMILY SSF51645 4 721 2.75E-302 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 Hamap MF_00641 Malate synthase G [glcB]. 1 724 403.99 T 28-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL504_RS20170 34f151b7e4718cd1f2a6b69f03b0068c 724 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 5 722 0.0 T 28-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL504_RS25645 57517838c01240bc8508d14635575e36 285 Pfam PF09339 IclR helix-turn-helix domain 11 62 6.4E-15 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS25645 57517838c01240bc8508d14635575e36 285 SUPERFAMILY SSF55781 81 281 6.87E-27 T 28-03-2018 IPR029016 GAF domain-like AL504_RS25645 57517838c01240bc8508d14635575e36 285 Gene3D G3DSA:1.10.10.10 3 82 4.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25645 57517838c01240bc8508d14635575e36 285 SMART SM00346 9 99 3.7E-21 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS25645 57517838c01240bc8508d14635575e36 285 SUPERFAMILY SSF46785 9 82 9.64E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25645 57517838c01240bc8508d14635575e36 285 Gene3D G3DSA:3.30.450.40 83 283 3.5E-36 T 28-03-2018 IPR029016 GAF domain-like AL504_RS25645 57517838c01240bc8508d14635575e36 285 Pfam PF01614 Bacterial transcriptional regulator 204 248 7.3E-6 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS30640 47bdd719589c69d7274519f085f567f9 255 SMART SM00346 1 91 0.0056 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS30640 47bdd719589c69d7274519f085f567f9 255 Pfam PF09339 IclR helix-turn-helix domain 9 53 1.0E-10 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS30640 47bdd719589c69d7274519f085f567f9 255 SUPERFAMILY SSF55781 74 248 9.81E-31 T 28-03-2018 IPR029016 GAF domain-like AL504_RS30640 47bdd719589c69d7274519f085f567f9 255 Pfam PF01614 Bacterial transcriptional regulator 125 241 2.1E-7 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS30640 47bdd719589c69d7274519f085f567f9 255 Gene3D G3DSA:1.10.10.10 1 71 1.6E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30640 47bdd719589c69d7274519f085f567f9 255 Gene3D G3DSA:3.30.450.40 72 252 1.3E-29 T 28-03-2018 IPR029016 GAF domain-like AL504_RS30640 47bdd719589c69d7274519f085f567f9 255 SUPERFAMILY SSF46785 4 66 1.21E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 442 488 4.2E-15 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 3.6E-18 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Gene3D G3DSA:3.30.300.20 201 278 1.3E-31 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 SUPERFAMILY SSF47794 428 489 9.89E-15 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 SUPERFAMILY SSF54814 202 280 2.03E-28 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Gene3D G3DSA:3.30.1480.10 1 132 2.3E-43 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 28.795 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 343 9.2E-122 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 SMART SM00316 136 202 2.7E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Pfam PF14520 Helix-hairpin-helix domain 431 485 1.0E-9 T 28-03-2018 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Pfam PF08529 NusA N-terminal domain 4 127 3.7E-37 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Gene3D G3DSA:1.10.150.20 427 492 8.5E-19 T 28-03-2018 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Gene3D G3DSA:1.10.150.20 357 423 1.4E-12 T 28-03-2018 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 SUPERFAMILY SSF54814 281 344 2.42E-14 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 SUPERFAMILY SSF50249 135 201 4.6E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Gene3D G3DSA:2.40.50.140 139 200 5.2E-13 T 28-03-2018 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Pfam PF13184 NusA-like KH domain 232 299 6.7E-25 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Gene3D G3DSA:3.30.300.20 280 349 2.4E-12 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 SUPERFAMILY SSF47794 358 418 5.65E-16 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 SUPERFAMILY SSF69705 1 129 4.32E-39 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL504_RS11075 5aa7d0e40570eb6892ab10ff851bfb13 492 Pfam PF00575 S1 RNA binding domain 138 194 1.8E-5 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 SUPERFAMILY SSF46785 1 110 8.84E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 SUPERFAMILY SSF53850 89 289 1.48E-32 T 28-03-2018 AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 Pfam PF03466 LysR substrate binding domain 88 274 6.3E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 Gene3D G3DSA:1.10.10.10 1 84 3.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 Gene3D G3DSA:3.40.190.10 176 258 7.4E-9 T 28-03-2018 AL504_RS15905 56dd15aff5a1d5034ebe5dda9e25895d 298 Gene3D G3DSA:3.40.190.10 88 175 2.2E-13 T 28-03-2018 AL504_RS03150 ad833e9dc4956ad7c372659a2c728de0 357 Gene3D G3DSA:3.20.20.70 4 354 1.7E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS03150 ad833e9dc4956ad7c372659a2c728de0 357 Pfam PF03060 Nitronate monooxygenase 8 338 3.6E-73 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS03150 ad833e9dc4956ad7c372659a2c728de0 357 SUPERFAMILY SSF51412 8 329 9.52E-59 T 28-03-2018 AL504_RS00090 b60669217160f61653244f4a076abc8c 177 Gene3D G3DSA:1.20.1290.10 43 169 1.8E-24 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00090 b60669217160f61653244f4a076abc8c 177 Gene3D G3DSA:1.20.5.810 10 42 8.0E-17 T 28-03-2018 AL504_RS00090 b60669217160f61653244f4a076abc8c 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 103 1.4E-12 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS00090 b60669217160f61653244f4a076abc8c 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 121 2.6E-14 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS00090 b60669217160f61653244f4a076abc8c 177 SUPERFAMILY SSF69118 1 175 1.7E-46 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS02550 9a22408ca29c949b14cf703aa9783e23 263 SUPERFAMILY SSF56524 59 262 2.88E-63 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS02550 9a22408ca29c949b14cf703aa9783e23 263 Gene3D G3DSA:3.90.420.10 58 263 8.7E-56 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS02550 9a22408ca29c949b14cf703aa9783e23 263 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 252 6.0E-32 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 SUPERFAMILY SSF49503 460 609 1.19E-39 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 SUPERFAMILY SSF49503 169 376 4.65E-55 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 ProSitePatterns PS00079 Multicopper oxidases signature 1. 140 160 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 8 610 1.9E-286 T 28-03-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 ProSitePatterns PS00080 Multicopper oxidases signature 2. 592 603 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 Gene3D G3DSA:2.60.40.420 372 610 1.3E-54 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 Gene3D G3DSA:2.60.40.420 171 371 2.3E-41 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 SUPERFAMILY SSF49503 37 188 3.32E-41 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 Pfam PF07731 Multicopper oxidase 493 609 3.9E-26 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 ProSitePatterns PS00079 Multicopper oxidases signature 1. 587 607 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 Gene3D G3DSA:2.60.40.420 30 163 5.5E-32 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 Pfam PF07732 Multicopper oxidase 55 166 3.9E-41 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AL504_RS16500 25a5f17448740f0ed874d2fb4388d7eb 610 Pfam PF00394 Multicopper oxidase 175 350 9.5E-33 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 Gene3D G3DSA:3.30.565.10 276 439 3.8E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 SMART SM00387 324 439 3.3E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 Gene3D G3DSA:1.10.287.130 207 275 1.2E-8 T 28-03-2018 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 SUPERFAMILY SSF47384 200 279 5.1E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 SUPERFAMILY SSF55874 273 435 3.27E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 6.3E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 6.3E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 6.3E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 SMART SM00388 217 283 1.0E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 279 1.2E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23170 7f6b06f2e27db96c4beeeb462739a12d 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 437 4.7E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04050 ad5d6c8eb6916484c95bb2962adc7889 217 Gene3D G3DSA:3.10.610.10 39 158 2.8E-7 T 28-03-2018 AL504_RS04050 ad5d6c8eb6916484c95bb2962adc7889 217 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.1E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04050 ad5d6c8eb6916484c95bb2962adc7889 217 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04050 ad5d6c8eb6916484c95bb2962adc7889 217 SUPERFAMILY SSF54523 9 73 9.94E-7 T 28-03-2018 AL504_RS04050 ad5d6c8eb6916484c95bb2962adc7889 217 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 9.1E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Gene3D G3DSA:2.160.10.10 242 322 2.6E-15 T 28-03-2018 AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Pfam PF12804 MobA-like NTP transferase domain 4 129 6.5E-24 T 28-03-2018 IPR025877 MobA-like NTP transferase AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 453 42.451 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 319 353 6.9E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 300 1.3E-4 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 396 430 1.2E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Gene3D G3DSA:3.90.550.10 2 241 8.2E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 Gene3D G3DSA:2.160.10.10 323 440 7.1E-32 T 28-03-2018 AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 SUPERFAMILY SSF51161 256 437 5.56E-49 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 SUPERFAMILY SSF53448 2 253 1.15E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 327 355 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL504_RS17755 1e23f7469f1e550aa51f24aa8fd1d854 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 3 456 6.3E-188 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SUPERFAMILY SSF54980 609 697 5.76E-31 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SUPERFAMILY SSF54211 484 605 1.04E-44 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Pfam PF03764 Elongation factor G, domain IV 484 603 1.4E-48 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Gene3D G3DSA:3.30.70.870 402 498 3.6E-38 T 28-03-2018 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.8E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 187 1.5E-33 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Pfam PF00009 Elongation factor Tu GTP binding domain 10 288 2.5E-67 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Pfam PF00679 Elongation factor G C-terminus 606 694 5.8E-32 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Gene3D G3DSA:2.40.30.10 281 400 6.0E-30 T 28-03-2018 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SMART SM00889 485 604 1.6E-76 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SMART SM00838 606 695 6.0E-54 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SUPERFAMILY SSF54980 409 486 1.8E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Gene3D G3DSA:3.30.230.10 499 614 5.4E-44 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Gene3D G3DSA:3.30.70.240 615 694 6.0E-32 T 28-03-2018 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SUPERFAMILY SSF50447 310 407 3.77E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SUPERFAMILY SSF50447 255 281 3.77E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Pfam PF14492 Elongation Factor G, domain II 409 483 8.6E-35 T 28-03-2018 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 SUPERFAMILY SSF52540 6 288 4.07E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Gene3D G3DSA:3.40.50.300 1 280 6.9E-58 T 28-03-2018 AL504_RS15045 f3a91d19106b0e0c412dfa9405587bda 703 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 110.069 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS07630 f82ccdea55187b6cad529fe8f8c7fd43 315 Pfam PF03466 LysR substrate binding domain 112 312 1.1E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07630 f82ccdea55187b6cad529fe8f8c7fd43 315 Gene3D G3DSA:1.10.10.10 19 106 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07630 f82ccdea55187b6cad529fe8f8c7fd43 315 Gene3D G3DSA:3.40.190.10 114 200 9.7E-16 T 28-03-2018 AL504_RS07630 f82ccdea55187b6cad529fe8f8c7fd43 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 2.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07630 f82ccdea55187b6cad529fe8f8c7fd43 315 SUPERFAMILY SSF46785 23 133 5.45E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07630 f82ccdea55187b6cad529fe8f8c7fd43 315 Gene3D G3DSA:3.40.190.10 201 284 1.1E-16 T 28-03-2018 AL504_RS07630 f82ccdea55187b6cad529fe8f8c7fd43 315 SUPERFAMILY SSF53850 112 314 2.02E-36 T 28-03-2018 AL504_RS13985 328b5ad606f941561df5c9cc05a61c78 214 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 13 206 9.7E-50 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL504_RS13985 328b5ad606f941561df5c9cc05a61c78 214 SUPERFAMILY SSF51569 10 208 1.08E-53 T 28-03-2018 AL504_RS13985 328b5ad606f941561df5c9cc05a61c78 214 Gene3D G3DSA:3.20.20.70 10 214 1.1E-33 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS13985 328b5ad606f941561df5c9cc05a61c78 214 Pfam PF01081 KDPG and KHG aldolase 13 201 1.9E-39 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 Gene3D G3DSA:3.30.565.10 283 438 2.9E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 270 6.0E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 Pfam PF00672 HAMP domain 153 202 1.6E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 SUPERFAMILY SSF55874 334 433 1.57E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 1.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 1.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 SUPERFAMILY SSF47384 190 269 2.16E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 Gene3D G3DSA:1.10.287.130 198 269 1.4E-10 T 28-03-2018 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 SMART SM00388 207 273 7.0E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 434 3.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 SMART SM00304 153 206 1.1E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS03385 07ef4f991b66ce7d1613baaf9481b186 439 SMART SM00387 332 437 9.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 Pfam PF00905 Penicillin binding protein transpeptidase domain 451 726 5.5E-41 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 SUPERFAMILY SSF53955 62 271 9.56E-74 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 85 735 2.4E-178 T 28-03-2018 AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 Gene3D G3DSA:3.40.710.10 262 750 1.3E-116 T 28-03-2018 AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 SUPERFAMILY SSF56601 231 253 1.94E-117 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 SUPERFAMILY SSF56601 445 758 1.94E-117 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 SUPERFAMILY SSF56601 286 337 1.94E-117 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 Pfam PF00912 Transglycosylase 76 250 2.1E-61 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 Pfam PF17092 Penicillin-binding protein OB-like domain 340 448 1.3E-15 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain AL504_RS20100 422749073edb86e6bc96bb42ea430f45 815 Gene3D G3DSA:1.10.3810.10 68 261 1.9E-76 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 Gene3D G3DSA:1.10.10.60 265 320 1.5E-17 T 28-03-2018 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 SMART SM00342 231 316 4.9E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 Pfam PF14525 AraC-binding-like domain 20 196 1.2E-22 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 Gene3D G3DSA:1.10.10.60 223 254 2.9E-8 T 28-03-2018 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 Pfam PF12833 Helix-turn-helix domain 238 317 2.9E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 SUPERFAMILY SSF46689 267 318 1.75E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.1E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.1E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 SUPERFAMILY SSF51215 78 169 4.32E-5 T 28-03-2018 AL504_RS19930 bcc2707b2c01e8a41f02136baeb87f4f 320 Gene3D G3DSA:2.60.120.10 2 222 6.8E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS07955 75ea735f0db34b79b0c012ace7991c0b 145 Gene3D G3DSA:1.10.10.10 1 143 4.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07955 75ea735f0db34b79b0c012ace7991c0b 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.4E-26 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL504_RS07955 75ea735f0db34b79b0c012ace7991c0b 145 Pfam PF02082 Transcriptional regulator 1 83 4.0E-21 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL504_RS07955 75ea735f0db34b79b0c012ace7991c0b 145 SUPERFAMILY SSF46785 2 133 3.44E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23110 eb6130204e9565a2e237951b45814e94 449 Pfam PF03023 MviN-like protein 44 442 6.0E-35 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 Gene3D G3DSA:1.10.540.10 1 119 8.3E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 SUPERFAMILY SSF47203 225 378 4.99E-57 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 SUPERFAMILY SSF56645 2 240 1.7E-77 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 7.6E-26 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 Gene3D G3DSA:2.40.110.10 120 216 5.4E-39 T 28-03-2018 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.8E-45 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 PIRSF PIRSF016578 3 193 5.0E-7 T 28-03-2018 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 PIRSF PIRSF016578 211 382 1.5E-11 T 28-03-2018 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 Gene3D G3DSA:1.20.140.10 217 383 8.5E-61 T 28-03-2018 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS06045 d0b3d4a172e46898501250e93707f320 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 1.5E-26 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS02805 4c6c811589e327f4389b36729b3d07b5 458 Gene3D G3DSA:2.120.10.10 119 291 1.7E-8 T 28-03-2018 AL504_RS02805 4c6c811589e327f4389b36729b3d07b5 458 Gene3D G3DSA:2.120.10.10 292 456 1.4E-6 T 28-03-2018 AL504_RS02805 4c6c811589e327f4389b36729b3d07b5 458 SUPERFAMILY SSF110296 340 420 1.78E-8 T 28-03-2018 AL504_RS02805 4c6c811589e327f4389b36729b3d07b5 458 SUPERFAMILY SSF110296 180 300 1.78E-8 T 28-03-2018 AL504_RS06185 cc98227fdf03468058369b0bd2882eeb 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.843 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL504_RS06185 cc98227fdf03468058369b0bd2882eeb 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 186 6.3E-68 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL504_RS06185 cc98227fdf03468058369b0bd2882eeb 186 Gene3D G3DSA:1.10.132.20 75 185 9.5E-37 T 28-03-2018 AL504_RS06185 cc98227fdf03468058369b0bd2882eeb 186 Gene3D G3DSA:1.10.132.20 3 74 1.1E-8 T 28-03-2018 AL504_RS06185 cc98227fdf03468058369b0bd2882eeb 186 Pfam PF01765 Ribosome recycling factor 21 184 2.7E-61 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL504_RS06185 cc98227fdf03468058369b0bd2882eeb 186 SUPERFAMILY SSF55194 5 185 3.92E-68 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL504_RS20465 d424b3f279c62cc3381cefccbba7f3cc 284 SUPERFAMILY SSF50037 235 281 8.7E-7 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal AL504_RS20465 d424b3f279c62cc3381cefccbba7f3cc 284 Pfam PF02237 Biotin protein ligase C terminal domain 236 281 1.1E-8 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AL504_RS20465 d424b3f279c62cc3381cefccbba7f3cc 284 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 166 4.3E-9 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AL504_RS20465 d424b3f279c62cc3381cefccbba7f3cc 284 SUPERFAMILY SSF55681 29 230 4.97E-36 T 28-03-2018 AL504_RS20465 d424b3f279c62cc3381cefccbba7f3cc 284 Gene3D G3DSA:2.30.30.100 235 281 1.7E-12 T 28-03-2018 AL504_RS20465 d424b3f279c62cc3381cefccbba7f3cc 284 Gene3D G3DSA:3.30.930.10 7 233 6.6E-43 T 28-03-2018 AL504_RS20465 d424b3f279c62cc3381cefccbba7f3cc 284 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 31 280 7.7E-32 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 Gene3D G3DSA:3.40.605.10 4 253 6.1E-45 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 Gene3D G3DSA:3.40.605.10 254 426 1.9E-39 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 Pfam PF00171 Aldehyde dehydrogenase family 318 381 2.6E-7 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 Pfam PF00171 Aldehyde dehydrogenase family 20 292 2.9E-16 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 PIRSF PIRSF000151 7 426 1.1E-174 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 SUPERFAMILY SSF53720 17 425 1.28E-118 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 22 415 1.6E-145 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 14 425 42.069 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL504_RS26835 f8999b3a017bdd08e0e055c891e07b40 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 353 - T 28-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL504_RS14985 96a5c1b15f156271c1b400c961f99187 226 TIGRFAM TIGR02796 tolQ: protein TolQ 8 223 4.0E-84 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AL504_RS14985 96a5c1b15f156271c1b400c961f99187 226 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 211 4.5E-42 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL504_RS03565 d0ae5419c76740e15f11099c40b24521 273 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03565 d0ae5419c76740e15f11099c40b24521 273 Gene3D G3DSA:3.40.50.300 2 273 1.9E-74 T 28-03-2018 AL504_RS03565 d0ae5419c76740e15f11099c40b24521 273 Pfam PF00005 ABC transporter 33 183 9.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03565 d0ae5419c76740e15f11099c40b24521 273 SUPERFAMILY SSF52540 23 255 7.52E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03565 d0ae5419c76740e15f11099c40b24521 273 SMART SM00382 41 233 3.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.0E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 Gene3D G3DSA:3.40.190.10 92 179 6.4E-22 T 28-03-2018 AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 SUPERFAMILY SSF53850 94 300 5.7E-45 T 28-03-2018 AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 Pfam PF03466 LysR substrate binding domain 92 297 1.2E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 Gene3D G3DSA:3.40.190.10 180 271 5.7E-20 T 28-03-2018 AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 Gene3D G3DSA:1.10.10.10 1 87 1.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07455 c5e61cdf371dba367ba2cbc869d6b83f 302 SUPERFAMILY SSF46785 7 89 1.24E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 SUPERFAMILY SSF55620 3 181 7.26E-78 T 28-03-2018 AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 4 181 3.7E-74 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 Gene3D G3DSA:1.10.286.10 2 49 1.1E-20 T 28-03-2018 AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 Gene3D G3DSA:3.30.1130.10 51 181 1.8E-61 T 28-03-2018 AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 Pfam PF01227 GTP cyclohydrolase I 4 180 2.0E-75 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 37.035 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL504_RS02470 a6c14d924814f38f660ba3056e742a16 181 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 Gene3D G3DSA:2.160.20.20 478 659 1.0E-44 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 Gene3D G3DSA:2.160.20.20 240 459 3.0E-12 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 SUPERFAMILY SSF51126 95 457 1.36E-38 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 SUPERFAMILY SSF51126 486 656 1.36E-38 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 Gene3D G3DSA:2.40.128.130 672 987 5.1E-37 T 28-03-2018 AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 Pfam PF03212 Pertactin 540 654 9.6E-13 T 28-03-2018 IPR004899 Pertactin, central region AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 544 987 3.7E-62 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 Pfam PF03797 Autotransporter beta-domain 718 963 2.3E-39 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 SMART SM00869 714 974 1.4E-31 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS01120 5519ae2930634f51c851eef0cc418dc1 987 SUPERFAMILY SSF103515 690 987 1.12E-34 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 Gene3D G3DSA:1.10.10.10 2 69 1.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 Gene3D G3DSA:1.20.120.530 70 213 2.3E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 SMART SM00345 9 67 5.3E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 SUPERFAMILY SSF48008 74 205 3.92E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 SUPERFAMILY SSF46785 4 71 5.87E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 Pfam PF07729 FCD domain 77 196 6.7E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 3.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 3.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 67 2.2E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02850 fe89903237bf368e66e7a4a24fd9765d 217 SMART SM00895 77 197 2.7E-14 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS05875 7a1feebf546493d2e1802db90509753d 497 Gene3D G3DSA:3.20.20.70 59 365 2.0E-8 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS05875 7a1feebf546493d2e1802db90509753d 497 Pfam PF07364 Metallopeptidase family M81 2 286 1.3E-91 T 28-03-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal AL504_RS05875 7a1feebf546493d2e1802db90509753d 497 PIRSF PIRSF012702 1 495 8.4E-162 T 28-03-2018 IPR009197 Microcystin LR degradation protein MlrC AL504_RS05875 7a1feebf546493d2e1802db90509753d 497 Pfam PF07171 MlrC C-terminus 298 479 5.9E-54 T 28-03-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal AL504_RS04785 6a8bf8c3df07e5f4443ae784e91fbe81 207 SUPERFAMILY SSF75620 3 196 3.92E-48 T 28-03-2018 AL504_RS04785 6a8bf8c3df07e5f4443ae784e91fbe81 207 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 201 1.9E-91 T 28-03-2018 IPR017509 Putative peptide chain release factor H AL504_RS04785 6a8bf8c3df07e5f4443ae784e91fbe81 207 Pfam PF00472 RF-1 domain 106 182 4.2E-24 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL504_RS04785 6a8bf8c3df07e5f4443ae784e91fbe81 207 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 115 131 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL504_RS04785 6a8bf8c3df07e5f4443ae784e91fbe81 207 Gene3D G3DSA:3.30.160.20 102 178 4.4E-25 T 28-03-2018 AL504_RS14695 5ba847cacc9dcf9d2453013e6f58be3b 329 Gene3D G3DSA:3.40.190.10 37 299 1.1E-12 T 28-03-2018 AL504_RS14695 5ba847cacc9dcf9d2453013e6f58be3b 329 SUPERFAMILY SSF53850 118 291 5.22E-10 T 28-03-2018 AL504_RS14695 5ba847cacc9dcf9d2453013e6f58be3b 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 324 2.2E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14695 5ba847cacc9dcf9d2453013e6f58be3b 329 PIRSF PIRSF017082 1 327 2.4E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 SUPERFAMILY SSF55021 270 360 8.81E-6 T 28-03-2018 AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 SMART SM00382 53 240 7.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 SUPERFAMILY SSF52540 25 262 3.51E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 SMART SM00930 288 361 0.0014 T 28-03-2018 IPR018449 NIL domain AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 Pfam PF00005 ABC transporter 44 192 7.1E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 Gene3D G3DSA:3.30.70.260 273 362 1.6E-15 T 28-03-2018 AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 Gene3D G3DSA:3.40.50.300 22 272 1.1E-77 T 28-03-2018 AL504_RS29815 ffc04dc0dbf4d0236638ae71765d434a 368 Pfam PF09383 NIL domain 291 354 5.8E-6 T 28-03-2018 IPR018449 NIL domain AL504_RS29905 b884244807b596344e0ffae71224c928 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 82 6.8E-17 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS29905 b884244807b596344e0ffae71224c928 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 48 79 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS29905 b884244807b596344e0ffae71224c928 217 Gene3D G3DSA:1.10.357.10 88 216 4.0E-13 T 28-03-2018 AL504_RS29905 b884244807b596344e0ffae71224c928 217 Gene3D G3DSA:1.10.10.60 11 57 2.3E-16 T 28-03-2018 AL504_RS29905 b884244807b596344e0ffae71224c928 217 SUPERFAMILY SSF46689 23 102 2.64E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS29905 b884244807b596344e0ffae71224c928 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 49 2.9E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS29905 b884244807b596344e0ffae71224c928 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 57 80 2.9E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS29905 b884244807b596344e0ffae71224c928 217 SUPERFAMILY SSF48498 105 212 8.9E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS29905 b884244807b596344e0ffae71224c928 217 Gene3D G3DSA:1.10.260.40 58 87 6.7E-16 T 28-03-2018 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 Pfam PF00672 HAMP domain 214 262 9.8E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 Gene3D G3DSA:1.10.287.1060 235 325 0.11 T 28-03-2018 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 Gene3D G3DSA:1.20.120.30 24 188 6.9E-20 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS14550 064aeb960157bcec698a27c173a79496 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 9.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 9.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 54 69 9.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 9.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 9.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 9.7E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 SMART SM00304 214 266 2.7E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 Gene3D G3DSA:1.10.287.950 326 518 2.1E-48 T 28-03-2018 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 SUPERFAMILY SSF47170 40 176 4.97E-17 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 SMART SM00283 267 514 4.6E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 482 4.4E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 SUPERFAMILY SSF58104 234 520 4.32E-75 T 28-03-2018 AL504_RS14550 064aeb960157bcec698a27c173a79496 538 Pfam PF02203 Tar ligand binding domain homologue 1 153 7.9E-20 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS21460 2033036acb0c59a8ba10d024d0ec6405 321 SUPERFAMILY SSF48576 6 320 2.16E-98 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS21460 2033036acb0c59a8ba10d024d0ec6405 321 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL504_RS21460 2033036acb0c59a8ba10d024d0ec6405 321 Gene3D G3DSA:1.10.600.10 4 321 1.1E-100 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS21460 2033036acb0c59a8ba10d024d0ec6405 321 Pfam PF00348 Polyprenyl synthetase 32 274 7.2E-78 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL504_RS21460 2033036acb0c59a8ba10d024d0ec6405 321 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL504_RS23880 d059f34853fb7a0a749688ef59a8105b 480 Gene3D G3DSA:1.10.45.10 433 472 3.2E-10 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL504_RS23880 d059f34853fb7a0a749688ef59a8105b 480 Pfam PF01565 FAD binding domain 44 181 2.6E-31 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS23880 d059f34853fb7a0a749688ef59a8105b 480 SUPERFAMILY SSF55103 224 477 1.24E-54 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS23880 d059f34853fb7a0a749688ef59a8105b 480 Gene3D G3DSA:3.30.465.10 97 240 6.8E-33 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS23880 d059f34853fb7a0a749688ef59a8105b 480 SUPERFAMILY SSF56176 6 221 4.46E-69 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS23880 d059f34853fb7a0a749688ef59a8105b 480 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 471 1.9E-49 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS23880 d059f34853fb7a0a749688ef59a8105b 480 Gene3D G3DSA:3.30.43.10 1 96 1.8E-25 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 5.2E-7 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 5.2E-7 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 10 159 2.5E-25 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 Gene3D G3DSA:3.55.40.10 41 162 1.3E-14 T 28-03-2018 AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 SUPERFAMILY SSF54523 13 84 1.18E-8 T 28-03-2018 AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 1.5E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 5.8E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06810 2de09b49fe234ac1abf055a11cabeef6 162 Pfam PF12019 Type II transport protein GspH 47 151 9.3E-5 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 Pfam PF00501 AMP-binding enzyme 31 438 3.4E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 SUPERFAMILY SSF56801 16 536 3.53E-143 T 28-03-2018 AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 Gene3D G3DSA:3.40.50.980 192 347 1.6E-38 T 28-03-2018 AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 Gene3D G3DSA:3.30.300.30 435 538 2.6E-24 T 28-03-2018 AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 Gene3D G3DSA:3.40.50.980 21 191 9.2E-39 T 28-03-2018 AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 Gene3D G3DSA:2.30.38.10 348 433 4.7E-27 T 28-03-2018 AL504_RS07240 f8766cf923b36d360fb4d4b5414d1a8e 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 524 6.3E-18 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 92.18 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 3.4E-6 T 28-03-2018 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 3.4E-6 T 28-03-2018 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 3.4E-6 T 28-03-2018 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 Gene3D G3DSA:1.20.200.10 137 413 1.6E-86 T 28-03-2018 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 SUPERFAMILY SSF48557 4 457 5.34E-153 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 459 1.0E-235 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 Pfam PF00206 Lyase 11 341 1.9E-110 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 Gene3D G3DSA:1.10.275.10 1 136 1.6E-60 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 Gene3D G3DSA:1.10.40.30 414 461 4.1E-25 T 28-03-2018 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 Pfam PF10415 Fumarase C C-terminus 407 460 9.7E-25 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.5E-33 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 2.5E-33 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 2.5E-33 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS14175 cbd7d86cd7fb2ae69f1a628fe31dbc01 463 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 2.5E-33 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS05490 6c7604baa40b08462297ff882c08aeee 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 5.3E-43 T 28-03-2018 AL504_RS05490 6c7604baa40b08462297ff882c08aeee 345 Gene3D G3DSA:3.90.180.10 3 151 8.0E-33 T 28-03-2018 AL504_RS05490 6c7604baa40b08462297ff882c08aeee 345 SUPERFAMILY SSF50129 7 146 3.86E-43 T 28-03-2018 IPR011032 GroES-like AL504_RS05490 6c7604baa40b08462297ff882c08aeee 345 Pfam PF00107 Zinc-binding dehydrogenase 161 303 5.1E-20 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS05490 6c7604baa40b08462297ff882c08aeee 345 Gene3D G3DSA:3.40.50.720 152 282 4.0E-30 T 28-03-2018 AL504_RS05490 6c7604baa40b08462297ff882c08aeee 345 SUPERFAMILY SSF51735 127 305 6.66E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 Gene3D G3DSA:1.10.10.60 11 56 7.4E-15 T 28-03-2018 AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 SUPERFAMILY SSF48498 104 210 5.78E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 1.1E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 1.1E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 47 78 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 Gene3D G3DSA:1.10.357.10 84 213 2.6E-15 T 28-03-2018 AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 81 2.2E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 Gene3D G3DSA:1.10.260.40 57 83 2.3E-14 T 28-03-2018 AL504_RS28200 bd9530eb66963655ea93bbadb1dc39cf 214 SUPERFAMILY SSF46689 22 96 2.19E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS05320 1492aa5d44d5e6c1509a95a6d899f165 291 SUPERFAMILY SSF103481 185 284 1.44E-11 T 28-03-2018 AL504_RS05320 1492aa5d44d5e6c1509a95a6d899f165 291 Pfam PF00892 EamA-like transporter family 150 281 3.2E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS05320 1492aa5d44d5e6c1509a95a6d899f165 291 Pfam PF00892 EamA-like transporter family 16 138 1.4E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS05320 1492aa5d44d5e6c1509a95a6d899f165 291 SUPERFAMILY SSF103481 45 141 1.07E-8 T 28-03-2018 AL504_RS26525 353ffe7f3349533691875efe28263e58 200 Pfam PF01810 LysE type translocator 13 198 3.9E-40 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS31270 3cf705a15c230aff1747cec97d3da142 107 SUPERFAMILY SSF89360 1 96 2.88E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL504_RS31270 3cf705a15c230aff1747cec97d3da142 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.0E-51 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AL504_RS31270 3cf705a15c230aff1747cec97d3da142 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.7E-23 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL504_RS31270 3cf705a15c230aff1747cec97d3da142 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL504_RS31270 3cf705a15c230aff1747cec97d3da142 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.9E-36 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL504_RS31270 3cf705a15c230aff1747cec97d3da142 107 Gene3D G3DSA:2.60.300.12 2 107 5.6E-37 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF51735 3651 3917 5.76E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.366.10 2056 2203 4.2E-44 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM00829 2920 3223 3.4E-155 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1784 1901 1.4E-42 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF47336 1433 1506 1.01E-18 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF02911 Formyl transferase, C-terminal domain 157 250 4.1E-7 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF07993 Male sterility protein 3654 3882 1.7E-51 T 28-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF13649 Methyltransferase domain 1051 1127 2.5E-6 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF00550 Phosphopantetheine attachment site 3526 3592 3.7E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF00550 Phosphopantetheine attachment site 1441 1505 1.5E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.50.720 3047 3156 1.9E-17 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF50129 2923 3050 1.73E-29 T 28-03-2018 IPR011032 GroES-like AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.50.170 1 153 1.4E-20 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF53901 1672 1894 8.52E-100 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF53901 1929 1950 8.52E-100 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF53901 1522 1645 8.52E-100 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.50.720 3230 3486 1.6E-54 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 ProSitePatterns PS00455 Putative AMP-binding domain signature. 689 700 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF52151 2256 2356 1.15E-68 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF52151 2059 2190 1.15E-68 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM00826 2429 2590 1.9E-46 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.50.720 3646 3966 1.1E-27 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 3652 3995 2.5E-66 T 28-03-2018 IPR010080 Thioester reductase-like domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF13602 Zinc-binding dehydrogenase 3096 3223 1.5E-19 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.50.980 527 694 1.3E-45 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.30.70.250 2204 2245 7.9E-17 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF08659 KR domain 3236 3414 5.0E-67 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.90.180.10 2911 3046 9.1E-37 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.47.10 1517 1788 1.3E-85 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.50.150 1043 1208 1.5E-11 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.30.300.30 933 1042 6.2E-9 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.10.129.10 2435 2558 1.0E-10 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.50.980 695 850 3.7E-37 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF00551 Formyl transferase 23 115 7.7E-7 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3236 3416 2.7E-65 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 555 962 2.7E-128 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF00501 AMP-binding enzyme 534 938 2.8E-102 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.47.10 1791 1952 1.9E-61 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1904 2017 2.7E-13 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF00698 Acyl transferase domain 2063 2383 6.7E-52 T 28-03-2018 IPR014043 Acyl transferase AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF52777 285 519 2.56E-6 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.30.300.30 1245 1447 8.1E-21 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM00825 Beta-ketoacyl synthase 1527 1954 1.6E-215 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM00823 Phosphopantetheine attachment site 3524 3596 5.0E-21 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM00823 Phosphopantetheine attachment site 1440 1509 6.8E-7 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM01294 3525 3592 0.0011 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:1.10.1200.10 3516 3628 8.2E-16 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF47336 3518 3607 8.11E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3551 3566 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.10.25.10 156 265 8.3E-11 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF51735 3017 3194 1.85E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1525 1776 2.8E-87 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.40.366.10 2246 2368 9.2E-28 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:2.30.38.10 851 928 1.4E-20 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF51735 3233 3472 2.09E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:1.10.1200.10 1448 1515 1.7E-20 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Pfam PF14765 Polyketide synthase dehydratase 2429 2709 7.7E-56 T 28-03-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2063 2364 2.7E-109 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF51735 2716 2899 1.46E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF53328 1 152 5.89E-24 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF55048 2189 2255 9.42E-12 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF56801 1377 1452 3.27E-151 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF56801 495 987 3.27E-151 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 Gene3D G3DSA:3.90.180.10 3157 3225 0.014 T 28-03-2018 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF50486 157 264 2.94E-10 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AL504_RS29480 8b90d1d0685419d8e124653a757f9527 4018 SUPERFAMILY SSF53335 1018 1159 1.25E-15 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-35 T 28-03-2018 AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 Gene3D G3DSA:1.10.10.10 122 226 4.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 SMART SM00862 147 221 1.1E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 SUPERFAMILY SSF52172 1 123 5.83E-39 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 SUPERFAMILY SSF46894 125 222 1.7E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 Pfam PF00072 Response regulator receiver domain 3 113 6.4E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 SMART SM00448 1 113 8.6E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS03380 affb626b2fa5e4789cc0687905456fbf 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 6.2E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 Gene3D G3DSA:3.30.1330.10 37 163 3.2E-52 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 9 348 46.363 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 SUPERFAMILY SSF56042 173 345 1.29E-58 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 Gene3D G3DSA:3.90.650.10 173 349 1.7E-61 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 166 7.2E-14 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 340 7.4E-37 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 338 3.5E-136 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS14215 5431d0580c0fedd0c481cc0a3292e581 349 SUPERFAMILY SSF55326 9 172 1.43E-52 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS15565 83afbdcadc4c6125487dc25c3be9a512 218 Gene3D G3DSA:3.90.280.10 1 204 9.2E-48 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL504_RS15565 83afbdcadc4c6125487dc25c3be9a512 218 SUPERFAMILY SSF49777 1 204 2.88E-42 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL504_RS15565 83afbdcadc4c6125487dc25c3be9a512 218 Pfam PF01161 Phosphatidylethanolamine-binding protein 31 201 1.5E-39 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL504_RS15565 83afbdcadc4c6125487dc25c3be9a512 218 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 80 201 1.6E-18 T 28-03-2018 IPR005247 YbhB/YbcL AL504_RS09690 70a40278de60cb315ce1f1c05455f495 205 Pfam PF05866 Endodeoxyribonuclease RusA 51 171 6.0E-23 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AL504_RS09690 70a40278de60cb315ce1f1c05455f495 205 Gene3D G3DSA:3.30.1330.70 44 186 7.9E-18 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AL504_RS09690 70a40278de60cb315ce1f1c05455f495 205 SUPERFAMILY SSF103084 48 170 4.97E-13 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 1.1E-15 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 465 580 3.7E-19 T 28-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Gene3D G3DSA:2.40.110.10 159 282 8.4E-24 T 28-03-2018 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 SUPERFAMILY SSF47203 289 465 1.93E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 SUPERFAMILY SSF56645 34 280 2.62E-61 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Gene3D G3DSA:1.20.140.10 297 464 1.1E-44 T 28-03-2018 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 33 5.1E-11 T 28-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 35 155 6.2E-15 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Gene3D G3DSA:1.10.540.10 15 158 2.3E-23 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS07860 280f30793cd894f05aca1e0f220a45ef 589 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 1.9E-25 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS02035 181524d0e02fc83117cbbf286382b6ef 338 Gene3D G3DSA:3.40.50.10540 73 295 1.0E-64 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS02035 181524d0e02fc83117cbbf286382b6ef 338 SUPERFAMILY SSF89796 8 69 1.19E-5 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS02035 181524d0e02fc83117cbbf286382b6ef 338 SUPERFAMILY SSF89796 76 329 2.88E-56 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS02035 181524d0e02fc83117cbbf286382b6ef 338 Pfam PF02515 CoA-transferase family III 79 273 2.2E-46 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS16945 af04b88c4164fb693d652d55c9e91af5 293 Hamap MF_01393 ATP synthase subunit a [atpB]. 32 293 14.064 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16945 af04b88c4164fb693d652d55c9e91af5 293 Pfam PF00119 ATP synthase A chain 43 286 1.2E-55 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16945 af04b88c4164fb693d652d55c9e91af5 293 SUPERFAMILY SSF81336 96 286 4.71E-37 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16945 af04b88c4164fb693d652d55c9e91af5 293 ProSitePatterns PS00449 ATP synthase a subunit signature. 216 225 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16945 af04b88c4164fb693d652d55c9e91af5 293 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 32 288 2.1E-40 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16945 af04b88c4164fb693d652d55c9e91af5 293 Gene3D G3DSA:1.20.120.220 93 293 4.7E-41 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 Gene3D G3DSA:3.40.50.720 2 47 7.7E-7 T 28-03-2018 AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 Gene3D G3DSA:3.40.50.720 48 257 2.9E-64 T 28-03-2018 AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.8E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.8E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.8E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.8E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.8E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.8E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 254 3.2E-62 T 28-03-2018 AL504_RS28780 e872176c17cb8be3b8307ea01ce012e3 260 SUPERFAMILY SSF51735 9 254 7.02E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS03330 c92b671f85f8960e29f70e16779e32a0 208 SUPERFAMILY SSF52540 21 204 9.59E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03330 c92b671f85f8960e29f70e16779e32a0 208 Pfam PF00005 ABC transporter 22 154 1.1E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03330 c92b671f85f8960e29f70e16779e32a0 208 Gene3D G3DSA:3.40.50.300 12 208 4.2E-45 T 28-03-2018 AL504_RS03330 c92b671f85f8960e29f70e16779e32a0 208 SMART SM00382 31 202 3.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS01415 558779002b706b92658f471debc89de8 286 Gene3D G3DSA:3.20.20.70 2 284 4.8E-55 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS01415 558779002b706b92658f471debc89de8 286 SUPERFAMILY SSF51569 5 266 1.98E-54 T 28-03-2018 AL504_RS01415 558779002b706b92658f471debc89de8 286 Pfam PF01791 DeoC/LacD family aldolase 19 250 4.8E-43 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL504_RS01415 558779002b706b92658f471debc89de8 286 SMART SM01133 18 250 4.2E-7 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL504_RS01415 558779002b706b92658f471debc89de8 286 PIRSF PIRSF038992 2 280 4.8E-70 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL504_RS01760 650e3eb29e5a41942d6e91014d8d63cc 160 Gene3D G3DSA:3.40.1490.10 26 158 5.0E-30 T 28-03-2018 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 AL504_RS01760 650e3eb29e5a41942d6e91014d8d63cc 160 Pfam PF09391 Protein of unknown function (DUF2000) 26 160 2.5E-32 T 28-03-2018 IPR018988 Protein of unknown function DUF2000 AL504_RS01760 650e3eb29e5a41942d6e91014d8d63cc 160 SUPERFAMILY SSF102462 26 160 5.75E-26 T 28-03-2018 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.758 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.4E-22 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 SUPERFAMILY SSF81271 279 359 8.28E-36 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 Gene3D G3DSA:1.10.150.300 110 200 8.2E-29 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 PIRSF PIRSF006641 1 363 4.5E-151 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-39 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 SUPERFAMILY SSF52540 3 301 1.44E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.8E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.8E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.8E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.8E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.5E-155 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 Gene3D G3DSA:3.10.20.30 263 362 3.9E-45 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS23300 8ff842e719d83254435bcce833a3ea81 363 Gene3D G3DSA:3.40.50.300 1 79 2.0E-8 T 28-03-2018 AL504_RS29800 249648464bcc87d2bf89107fabb2ff58 468 Pfam PF07690 Major Facilitator Superfamily 25 390 2.3E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS29800 249648464bcc87d2bf89107fabb2ff58 468 Gene3D G3DSA:1.20.1250.20 10 227 1.1E-38 T 28-03-2018 AL504_RS29800 249648464bcc87d2bf89107fabb2ff58 468 SUPERFAMILY SSF103473 11 445 4.97E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS29800 249648464bcc87d2bf89107fabb2ff58 468 Gene3D G3DSA:1.20.1250.20 241 452 6.3E-15 T 28-03-2018 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 3.8E-35 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 265 417 3.3E-33 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 TIGRFAM TIGR00115 tig: trigger factor 11 416 4.7E-131 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 239 1.1E-12 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 PIRSF PIRSF003095 1 436 3.7E-127 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 Gene3D G3DSA:3.10.50.40 159 228 4.9E-13 T 28-03-2018 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 Gene3D G3DSA:1.10.3120.10 229 394 1.0E-42 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 Hamap MF_00303 Trigger factor [tig]. 1 423 20.281 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 Gene3D G3DSA:3.30.70.1050 1 119 5.0E-27 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 SUPERFAMILY SSF102735 1 130 1.44E-30 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 SUPERFAMILY SSF109998 250 435 1.18E-44 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL504_RS31215 14f00b293a25351234086e3a71ad31c7 436 SUPERFAMILY SSF54534 103 243 3.37E-30 T 28-03-2018 AL504_RS20790 ea8cdea0f287393b4e7b776d1f960a88 388 SUPERFAMILY SSF52096 54 188 9.64E-7 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS04405 418a3f5485cb2aeb614fb3e5e5402199 427 Gene3D G3DSA:1.20.1250.20 27 217 2.7E-33 T 28-03-2018 AL504_RS04405 418a3f5485cb2aeb614fb3e5e5402199 427 Gene3D G3DSA:1.20.1250.20 231 424 1.1E-12 T 28-03-2018 AL504_RS04405 418a3f5485cb2aeb614fb3e5e5402199 427 Pfam PF07690 Major Facilitator Superfamily 34 255 2.5E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS04405 418a3f5485cb2aeb614fb3e5e5402199 427 SUPERFAMILY SSF103473 14 416 4.58E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Gene3D G3DSA:2.30.130.40 1 121 1.1E-32 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 688 696 - T 28-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Gene3D G3DSA:3.40.50.300 315 492 9.1E-29 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 SUPERFAMILY SSF88697 13 204 1.86E-53 T 28-03-2018 IPR015947 PUA-like domain AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 685 704 3.5E-56 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 738 756 3.5E-56 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 715 734 3.5E-56 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 3.5E-56 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 607 623 3.5E-56 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Hamap MF_01973 Lon protease [lon]. 14 784 70.395 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 SUPERFAMILY SSF54211 607 782 6.83E-57 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 SMART SM00382 350 494 2.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 7.5E-18 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 PIRSF PIRSF001174 2 787 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 SMART SM00464 13 205 7.5E-76 T 28-03-2018 IPR003111 Lon, substrate-binding domain AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 582 784 4.6E-95 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 203 1.7E-41 T 28-03-2018 IPR003111 Lon, substrate-binding domain AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Gene3D G3DSA:3.30.230.10 589 802 5.6E-69 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Gene3D G3DSA:1.10.4060.10 125 214 2.6E-31 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 Gene3D G3DSA:1.10.8.60 493 588 4.7E-32 T 28-03-2018 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 TIGRFAM TIGR00763 lon: endopeptidase La 15 783 1.6E-301 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL504_RS31230 072741e9fc6108b554cc540f03083ebd 816 SUPERFAMILY SSF52540 317 597 8.93E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11750 5618af18d91b0a7a10fdee57a6afab3f 86 SUPERFAMILY SSF109910 3 80 1.7E-18 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase AL504_RS11750 5618af18d91b0a7a10fdee57a6afab3f 86 Gene3D G3DSA:1.10.150.250 3 85 5.4E-20 T 28-03-2018 AL504_RS11750 5618af18d91b0a7a10fdee57a6afab3f 86 Pfam PF03937 Flavinator of succinate dehydrogenase 9 68 5.6E-19 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 SUPERFAMILY SSF142019 99 339 1.96E-86 T 28-03-2018 AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 149 318 1.1E-44 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 441 452 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 SUPERFAMILY SSF142984 342 423 6.8E-19 T 28-03-2018 AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 SUPERFAMILY SSF52833 6 86 4.03E-6 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 SUPERFAMILY SSF140490 424 511 6.93E-29 T 28-03-2018 AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 SMART SM00928 428 474 9.4E-18 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 266 281 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25435 a56ab95612249cd9c89e3372b6abd757 523 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 430 511 5.4E-30 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS10615 4ae7e9062e0c3dfea46ca049b96bb92a 625 Pfam PF02653 Branched-chain amino acid transport system / permease component 339 599 2.3E-39 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS10615 4ae7e9062e0c3dfea46ca049b96bb92a 625 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 283 8.0E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS10615 4ae7e9062e0c3dfea46ca049b96bb92a 625 Gene3D G3DSA:1.10.3470.10 7 276 1.5E-39 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS10615 4ae7e9062e0c3dfea46ca049b96bb92a 625 Gene3D G3DSA:1.10.3470.10 277 605 4.4E-40 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS08090 595be8803e6182b709ef906dc70f808a 408 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 377 1.0E-37 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08090 595be8803e6182b709ef906dc70f808a 408 SMART SM00267 210 381 2.5E-49 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08090 595be8803e6182b709ef906dc70f808a 408 SUPERFAMILY SSF55073 226 380 7.85E-46 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS08090 595be8803e6182b709ef906dc70f808a 408 Gene3D G3DSA:3.30.70.270 214 385 3.3E-52 T 28-03-2018 AL504_RS08090 595be8803e6182b709ef906dc70f808a 408 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 380 1.3E-43 T 28-03-2018 IPR000160 GGDEF domain AL504_RS26595 380a766a51897d08dffbbd0db0797bb8 181 Pfam PF02469 Fasciclin domain 46 180 2.2E-32 T 28-03-2018 IPR000782 FAS1 domain AL504_RS26595 380a766a51897d08dffbbd0db0797bb8 181 SUPERFAMILY SSF82153 35 180 1.44E-38 T 28-03-2018 IPR000782 FAS1 domain AL504_RS26595 380a766a51897d08dffbbd0db0797bb8 181 Gene3D G3DSA:2.30.180.10 35 181 8.1E-37 T 28-03-2018 IPR000782 FAS1 domain AL504_RS26595 380a766a51897d08dffbbd0db0797bb8 181 SMART SM00554 70 181 1.3E-24 T 28-03-2018 IPR000782 FAS1 domain AL504_RS09935 d988055960f94455a244ad21e787752d 1271 Pfam PF04408 Helicase associated domain (HA2) 423 511 3.1E-15 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL504_RS09935 d988055960f94455a244ad21e787752d 1271 Gene3D G3DSA:3.40.50.300 191 380 6.0E-47 T 28-03-2018 AL504_RS09935 d988055960f94455a244ad21e787752d 1271 SUPERFAMILY SSF52540 10 532 6.76E-99 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09935 d988055960f94455a244ad21e787752d 1271 Pfam PF00270 DEAD/DEAH box helicase 18 166 7.8E-6 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS09935 d988055960f94455a244ad21e787752d 1271 SMART SM00847 420 524 3.0E-29 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL504_RS09935 d988055960f94455a244ad21e787752d 1271 Gene3D G3DSA:3.40.50.300 9 168 1.2E-32 T 28-03-2018 AL504_RS09935 d988055960f94455a244ad21e787752d 1271 SMART SM00487 8 197 2.8E-27 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS09935 d988055960f94455a244ad21e787752d 1271 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 588 664 6.0E-17 T 28-03-2018 IPR011709 Domain of unknown function DUF1605 AL504_RS09935 d988055960f94455a244ad21e787752d 1271 SMART SM00382 25 326 4.5E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09935 d988055960f94455a244ad21e787752d 1271 SMART SM00490 259 360 4.7E-20 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS09935 d988055960f94455a244ad21e787752d 1271 Pfam PF00271 Helicase conserved C-terminal domain 235 360 2.6E-13 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS09935 d988055960f94455a244ad21e787752d 1271 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 2 1267 0.0 T 28-03-2018 IPR010222 RNA helicase HrpA GO:0004004 AL504_RS09935 d988055960f94455a244ad21e787752d 1271 Pfam PF11898 Domain of unknown function (DUF3418) 678 1267 1.0E-212 T 28-03-2018 IPR024590 RNA helicase HrpA, C-terminal AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 5.1E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 Gene3D G3DSA:3.30.70.20 107 156 1.3E-5 T 28-03-2018 AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 Gene3D G3DSA:3.30.70.20 74 106 3.6E-13 T 28-03-2018 AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 7.3E-46 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 Gene3D G3DSA:3.30.70.20 23 73 5.8E-7 T 28-03-2018 AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 27.503 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12530 e71523aba25acc9cc1815e46bff980ed 162 SUPERFAMILY SSF54862 36 145 6.7E-24 T 28-03-2018 AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 Pfam PF05954 Phage late control gene D protein (GPD) 44 365 1.3E-78 T 28-03-2018 AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 SUPERFAMILY SSF69279 30 208 9.64E-49 T 28-03-2018 AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 37 564 1.4E-79 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 27 558 1.2E-92 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 Gene3D G3DSA:3.55.50.10 113 212 3.2E-27 T 28-03-2018 AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 845 1.6E-39 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 SUPERFAMILY SSF69255 403 508 5.23E-19 T 28-03-2018 AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 Gene3D G3DSA:2.40.50.230 409 510 9.4E-26 T 28-03-2018 IPR006531 Gp5 N-terminal AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 541 648 1.6E-31 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AL504_RS01890 2a031de67d5fa6d5a55c7d1cf25c3080 1762 SUPERFAMILY SSF69279 225 404 2.89E-17 T 28-03-2018 AL504_RS22355 5facbf3dc5f24193157865e41479e002 168 Pfam PF04542 Sigma-70 region 2 10 74 1.5E-8 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22355 5facbf3dc5f24193157865e41479e002 168 SUPERFAMILY SSF88659 103 165 8.94E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22355 5facbf3dc5f24193157865e41479e002 168 Gene3D G3DSA:1.10.10.10 73 167 4.6E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22355 5facbf3dc5f24193157865e41479e002 168 SUPERFAMILY SSF88946 7 86 1.77E-11 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22355 5facbf3dc5f24193157865e41479e002 168 Pfam PF08281 Sigma-70, region 4 109 158 1.0E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22355 5facbf3dc5f24193157865e41479e002 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 164 9.8E-20 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22355 5facbf3dc5f24193157865e41479e002 168 Gene3D G3DSA:1.10.1740.10 4 72 4.3E-12 T 28-03-2018 AL504_RS23600 7757d42ea3c02f75ee34b09787457f50 433 Gene3D G3DSA:1.10.10.10 24 72 0.0019 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23600 7757d42ea3c02f75ee34b09787457f50 433 SUPERFAMILY SSF48256 91 432 1.26E-58 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS23600 7757d42ea3c02f75ee34b09787457f50 433 Gene3D G3DSA:1.10.230.10 310 395 1.6E-13 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL504_RS23600 7757d42ea3c02f75ee34b09787457f50 433 Pfam PF00285 Citrate synthase, C-terminal domain 92 426 7.5E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS23600 7757d42ea3c02f75ee34b09787457f50 433 Gene3D G3DSA:1.10.580.10 73 309 3.8E-30 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 Pfam PF03466 LysR substrate binding domain 90 260 8.2E-11 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 Gene3D G3DSA:1.10.10.10 1 86 1.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 SUPERFAMILY SSF46785 1 84 6.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 Gene3D G3DSA:3.40.190.10 145 238 2.4E-6 T 28-03-2018 AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 SUPERFAMILY SSF53850 90 262 1.12E-12 T 28-03-2018 AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.4E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.4E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.4E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24780 10648853bb11ff4e0ddc098bbeefa286 266 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 7.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29915 b2bf587c6ce2fa3a327c96f37faa0215 421 Gene3D G3DSA:3.40.50.1820 1 318 7.6E-89 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29915 b2bf587c6ce2fa3a327c96f37faa0215 421 Gene3D G3DSA:3.40.50.1820 319 420 5.5E-13 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29915 b2bf587c6ce2fa3a327c96f37faa0215 421 SUPERFAMILY SSF53474 5 413 1.66E-90 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29915 b2bf587c6ce2fa3a327c96f37faa0215 421 Pfam PF00135 Carboxylesterase family 8 310 3.8E-72 T 28-03-2018 IPR002018 Carboxylesterase, type B AL504_RS27610 a9f773c39c78a033285058acda51121f 390 SUPERFAMILY SSF103473 3 384 1.96E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS27610 a9f773c39c78a033285058acda51121f 390 Gene3D G3DSA:1.20.1250.20 2 194 3.2E-20 T 28-03-2018 AL504_RS27610 a9f773c39c78a033285058acda51121f 390 Gene3D G3DSA:1.20.1250.20 200 390 1.5E-10 T 28-03-2018 AL504_RS27610 a9f773c39c78a033285058acda51121f 390 Pfam PF07690 Major Facilitator Superfamily 16 247 4.7E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS22065 a90ed2f860c4df57b46c6b32cb4f8479 286 SUPERFAMILY SSF51621 10 283 2.87E-92 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS22065 a90ed2f860c4df57b46c6b32cb4f8479 286 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL504_RS22065 a90ed2f860c4df57b46c6b32cb4f8479 286 Gene3D G3DSA:3.20.20.60 2 286 6.4E-87 T 28-03-2018 AL504_RS22065 a90ed2f860c4df57b46c6b32cb4f8479 286 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 252 3.3E-57 T 28-03-2018 AL504_RS26815 4e51f3704092a5ed92fb7fef03862697 467 ProSitePatterns PS00571 Amidases signature. 153 184 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS26815 4e51f3704092a5ed92fb7fef03862697 467 SUPERFAMILY SSF75304 3 455 3.4E-111 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS26815 4e51f3704092a5ed92fb7fef03862697 467 Gene3D G3DSA:3.90.1300.10 1 466 6.5E-108 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS26815 4e51f3704092a5ed92fb7fef03862697 467 Pfam PF01425 Amidase 27 446 3.6E-80 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS21490 77a9a41f8930fa2f01aa5114400cbb8c 276 Gene3D G3DSA:3.60.110.10 1 275 8.4E-81 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS21490 77a9a41f8930fa2f01aa5114400cbb8c 276 SUPERFAMILY SSF56317 3 270 5.49E-79 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS21490 77a9a41f8930fa2f01aa5114400cbb8c 276 Pfam PF00795 Carbon-nitrogen hydrolase 4 254 2.0E-56 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 Gene3D G3DSA:3.10.350.10 418 471 2.5E-13 T 28-03-2018 AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 Pfam PF01476 LysM domain 424 466 5.6E-13 T 28-03-2018 IPR018392 LysM domain AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 Pfam PF01476 LysM domain 330 370 2.5E-6 T 28-03-2018 IPR018392 LysM domain AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 Pfam PF01464 Transglycosylase SLT domain 107 207 1.2E-23 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 117 145 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 Gene3D G3DSA:3.10.350.10 318 412 3.1E-7 T 28-03-2018 AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 Gene3D G3DSA:1.10.530.10 79 246 2.6E-32 T 28-03-2018 AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 SMART SM00257 423 466 8.3E-16 T 28-03-2018 IPR018392 LysM domain AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 SMART SM00257 326 370 0.0032 T 28-03-2018 IPR018392 LysM domain AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 SUPERFAMILY SSF53955 96 243 6.84E-41 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 SUPERFAMILY SSF54106 422 466 1.01E-10 T 28-03-2018 IPR018392 LysM domain AL504_RS15225 6a23500df286b61905dfa6f9cad025b7 472 SUPERFAMILY SSF54106 325 370 2.35E-6 T 28-03-2018 IPR018392 LysM domain AL504_RS15940 48592003fa1a673cbdab458eecf5b7ed 269 SUPERFAMILY SSF53613 5 265 5.46E-36 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS15940 48592003fa1a673cbdab458eecf5b7ed 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 259 1.3E-34 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL504_RS15940 48592003fa1a673cbdab458eecf5b7ed 269 Gene3D G3DSA:3.40.1190.20 4 262 1.6E-24 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS20445 3d7cbe54d04a6046317aefce47d53e48 350 Gene3D G3DSA:3.30.360.10 149 349 7.0E-42 T 28-03-2018 AL504_RS20445 3d7cbe54d04a6046317aefce47d53e48 350 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 256 4.7E-21 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AL504_RS20445 3d7cbe54d04a6046317aefce47d53e48 350 Gene3D G3DSA:3.40.50.720 4 148 3.2E-40 T 28-03-2018 AL504_RS20445 3d7cbe54d04a6046317aefce47d53e48 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 127 9.9E-28 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL504_RS20445 3d7cbe54d04a6046317aefce47d53e48 350 SUPERFAMILY SSF51735 5 165 2.77E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20445 3d7cbe54d04a6046317aefce47d53e48 350 SUPERFAMILY SSF55347 139 286 1.21E-33 T 28-03-2018 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 Gene3D G3DSA:3.40.190.10 188 275 4.4E-19 T 28-03-2018 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 Gene3D G3DSA:1.10.10.10 5 92 4.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 SUPERFAMILY SSF53850 103 309 2.64E-27 T 28-03-2018 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 SUPERFAMILY SSF46785 7 90 8.47E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 Gene3D G3DSA:3.40.190.10 103 187 3.4E-10 T 28-03-2018 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 1.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07205 8f79c9b2e81fe53fb1e0d5e2d20f5130 323 Pfam PF03466 LysR substrate binding domain 100 307 2.0E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 SMART SM00138 15 275 1.3E-103 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 Pfam PF01739 CheR methyltransferase, SAM binding domain 83 270 6.9E-57 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 PIRSF PIRSF000410 4 275 1.4E-95 T 28-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 Gene3D G3DSA:1.10.155.10 7 81 3.8E-22 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 Pfam PF03705 CheR methyltransferase, all-alpha domain 16 68 1.2E-15 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 SUPERFAMILY SSF47757 6 82 1.96E-22 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 Gene3D G3DSA:3.40.50.150 82 275 1.9E-47 T 28-03-2018 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 8.5E-46 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 PRINTS PR00996 Glutamate methyltransferase family signature 215 229 8.5E-46 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 PRINTS PR00996 Glutamate methyltransferase family signature 37 50 8.5E-46 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 PRINTS PR00996 Glutamate methyltransferase family signature 234 257 8.5E-46 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 PRINTS PR00996 Glutamate methyltransferase family signature 76 88 8.5E-46 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 PRINTS PR00996 Glutamate methyltransferase family signature 109 129 8.5E-46 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS06510 0eed04cbf5c6a36f0b4d76fdb75b2ffe 278 SUPERFAMILY SSF53335 83 272 1.61E-58 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 Hamap MF_00008 Thymidylate synthase [thyA]. 1 323 35.373 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 Gene3D G3DSA:3.30.572.10 1 323 5.4E-98 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 323 9.1E-59 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 SUPERFAMILY SSF55831 1 123 5.76E-98 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 SUPERFAMILY SSF55831 151 323 5.76E-98 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 Pfam PF00303 Thymidylate synthase 2 323 5.9E-87 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 PRINTS PR00108 Thymidylate synthase family signature 187 202 2.5E-28 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.5E-28 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 PRINTS PR00108 Thymidylate synthase family signature 245 262 2.5E-28 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 PRINTS PR00108 Thymidylate synthase family signature 207 233 2.5E-28 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 PRINTS PR00108 Thymidylate synthase family signature 161 180 2.5E-28 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS23080 9724014cbfff0d7b9bfa0868834be501 323 ProSitePatterns PS00091 Thymidylate synthase active site. 172 199 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL504_RS03930 e1f9078fb126fcbd4f19334327c39763 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 309 8.8E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS03930 e1f9078fb126fcbd4f19334327c39763 330 Gene3D G3DSA:3.40.50.300 18 330 4.1E-82 T 28-03-2018 AL504_RS03930 e1f9078fb126fcbd4f19334327c39763 330 SUPERFAMILY SSF52540 21 264 3.06E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03930 e1f9078fb126fcbd4f19334327c39763 330 SMART SM00382 51 242 5.3E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03930 e1f9078fb126fcbd4f19334327c39763 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 2.8E-27 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS03930 e1f9078fb126fcbd4f19334327c39763 330 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03930 e1f9078fb126fcbd4f19334327c39763 330 Pfam PF00005 ABC transporter 43 192 1.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17420 85b3e737b8e5e5e1956467de26535733 243 Gene3D G3DSA:1.20.910.10 2 239 1.2E-43 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS17420 85b3e737b8e5e5e1956467de26535733 243 SUPERFAMILY SSF48613 9 226 1.65E-50 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS17420 85b3e737b8e5e5e1956467de26535733 243 SMART SM01236 78 181 1.8E-26 T 28-03-2018 AL504_RS17420 85b3e737b8e5e5e1956467de26535733 243 Pfam PF14518 Iron-containing redox enzyme 44 215 6.6E-36 T 28-03-2018 IPR028201 PqqC-like protein AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 SUPERFAMILY SSF51735 9 253 1.08E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 Pfam PF00106 short chain dehydrogenase 9 192 6.5E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.4E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.4E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.4E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.4E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.4E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 189 0.0086 T 28-03-2018 AL504_RS23685 712feb5cf2e9486605fe98ef34476d67 284 Gene3D G3DSA:3.40.50.720 8 280 5.0E-66 T 28-03-2018 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 Pfam PF00672 HAMP domain 216 264 4.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 Gene3D G3DSA:1.10.287.1060 233 327 0.17 T 28-03-2018 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 SUPERFAMILY SSF47170 28 179 8.89E-7 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 61 76 1.3E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.3E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.3E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.3E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.3E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.3E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 1.2E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 Gene3D G3DSA:1.10.287.950 328 520 3.6E-49 T 28-03-2018 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 SMART SM00283 269 516 5.4E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 Pfam PF02203 Tar ligand binding domain homologue 1 169 2.9E-21 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 Gene3D G3DSA:1.20.120.30 23 188 9.4E-22 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 SMART SM00304 216 268 4.3E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS00530 49ca94b8fda9d3cc1301d444981cac10 541 SUPERFAMILY SSF58104 236 520 1.83E-74 T 28-03-2018 AL504_RS19805 93438d216d86c4963f5aa634be220675 254 Gene3D G3DSA:3.40.50.1110 18 244 2.0E-21 T 28-03-2018 AL504_RS19805 93438d216d86c4963f5aa634be220675 254 SUPERFAMILY SSF52266 20 244 3.51E-22 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS19805 93438d216d86c4963f5aa634be220675 254 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 234 8.3E-12 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS17825 b7fd38b04d27218a7da0e45d4068e21c 268 SUPERFAMILY SSF55811 100 263 2.03E-26 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS17825 b7fd38b04d27218a7da0e45d4068e21c 268 Gene3D G3DSA:3.90.79.10 87 264 3.6E-23 T 28-03-2018 AL504_RS17825 b7fd38b04d27218a7da0e45d4068e21c 268 Pfam PF00293 NUDIX domain 126 196 7.0E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Pfam PF07724 AAA domain (Cdc48 subfamily) 605 768 1.1E-55 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 863 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 SUPERFAMILY SSF52540 555 864 2.49E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 SMART SM01086 774 863 3.7E-35 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 SUPERFAMILY SSF52540 158 519 7.41E-99 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 610 628 2.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 717 731 2.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 655 673 2.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 684 702 2.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Gene3D G3DSA:1.10.8.60 774 868 2.1E-22 T 28-03-2018 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 640 658 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Gene3D G3DSA:1.10.1780.10 1 150 6.4E-36 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 774 852 1.2E-24 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Gene3D G3DSA:3.40.50.300 156 341 1.8E-25 T 28-03-2018 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 SUPERFAMILY SSF81923 4 140 8.63E-37 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 SMART SM00382 197 343 6.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 SMART SM00382 606 775 4.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 9.4E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Gene3D G3DSA:3.40.50.300 561 773 2.1E-50 T 28-03-2018 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 5.5E-12 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.0E-11 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS30155 ea5455159c94fe121e5fbea5b7e31193 868 Gene3D G3DSA:1.10.8.60 342 556 1.6E-45 T 28-03-2018 AL504_RS03760 15e18d39eb9d4bac87ae4d6995eeb6c5 359 SUPERFAMILY SSF56281 78 328 1.7E-36 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS03760 15e18d39eb9d4bac87ae4d6995eeb6c5 359 Pfam PF12706 Beta-lactamase superfamily domain 95 287 5.1E-46 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS03760 15e18d39eb9d4bac87ae4d6995eeb6c5 359 Gene3D G3DSA:3.60.15.10 62 334 3.9E-51 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 Gene3D G3DSA:3.40.50.970 4 191 3.0E-49 T 28-03-2018 AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 541 1.1E-34 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 SUPERFAMILY SSF52518 367 549 3.4E-51 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 176 6.0E-51 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 SUPERFAMILY SSF52467 162 358 5.01E-36 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 SUPERFAMILY SSF52518 9 185 7.68E-51 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 Gene3D G3DSA:3.40.50.1220 192 330 4.1E-29 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 334 3.3E-28 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS08455 36fde5578f73be466cbc94ec933488fc 571 Gene3D G3DSA:3.40.50.970 331 555 1.3E-39 T 28-03-2018 AL504_RS21120 d1a7275744373fed0ae455bd0637ee4e 264 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS21120 d1a7275744373fed0ae455bd0637ee4e 264 Gene3D G3DSA:3.40.50.300 5 262 2.1E-57 T 28-03-2018 AL504_RS21120 d1a7275744373fed0ae455bd0637ee4e 264 SMART SM00382 46 239 9.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS21120 d1a7275744373fed0ae455bd0637ee4e 264 SUPERFAMILY SSF52540 22 260 4.05E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21120 d1a7275744373fed0ae455bd0637ee4e 264 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 22 264 2.7E-114 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AL504_RS21120 d1a7275744373fed0ae455bd0637ee4e 264 Pfam PF00005 ABC transporter 38 189 1.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21120 d1a7275744373fed0ae455bd0637ee4e 264 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 259 4.9E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS07410 412b3962c328ada8a3a7563bc429f5a8 327 SUPERFAMILY SSF53850 124 281 2.67E-15 T 28-03-2018 AL504_RS07410 412b3962c328ada8a3a7563bc429f5a8 327 PIRSF PIRSF017082 1 324 4.0E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS07410 412b3962c328ada8a3a7563bc429f5a8 327 Gene3D G3DSA:3.40.190.10 133 235 2.4E-12 T 28-03-2018 AL504_RS07410 412b3962c328ada8a3a7563bc429f5a8 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 316 1.1E-67 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS28825 86e9a341bc19233911fe373974493dce 367 Pfam PF13378 Enolase C-terminal domain-like 150 353 4.7E-67 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS28825 86e9a341bc19233911fe373974493dce 367 Gene3D G3DSA:3.20.20.120 133 351 1.4E-63 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS28825 86e9a341bc19233911fe373974493dce 367 SUPERFAMILY SSF54826 3 129 2.46E-29 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS28825 86e9a341bc19233911fe373974493dce 367 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 22 127 6.7E-20 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL504_RS28825 86e9a341bc19233911fe373974493dce 367 SMART SM00922 147 244 2.1E-26 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL504_RS28825 86e9a341bc19233911fe373974493dce 367 Gene3D G3DSA:3.30.390.10 1 132 3.9E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS28825 86e9a341bc19233911fe373974493dce 367 SUPERFAMILY SSF51604 115 360 3.01E-76 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS12075 8488f92cf5e10470b283b2a32fd77bf6 320 SUPERFAMILY SSF53850 109 275 2.68E-11 T 28-03-2018 AL504_RS12075 8488f92cf5e10470b283b2a32fd77bf6 320 PIRSF PIRSF017082 1 320 3.1E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS12075 8488f92cf5e10470b283b2a32fd77bf6 320 Gene3D G3DSA:3.40.190.10 120 255 2.5E-11 T 28-03-2018 AL504_RS12075 8488f92cf5e10470b283b2a32fd77bf6 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 316 5.7E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 PIRSF PIRSF000463 1 711 1.6E-272 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Gene3D G3DSA:3.20.20.80 227 618 1.0E-78 T 28-03-2018 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Pfam PF00128 Alpha amylase, catalytic domain 254 332 2.4E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Gene3D G3DSA:2.60.40.10 98 226 3.6E-27 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Gene3D G3DSA:2.60.40.10 1 89 1.2E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 84 709 43.015 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 SUPERFAMILY SSF81296 4 91 9.62E-12 T 28-03-2018 IPR014756 Immunoglobulin E-set AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 108 190 3.0E-19 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 98 706 2.1E-264 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Gene3D G3DSA:2.60.40.1180 619 709 1.9E-31 T 28-03-2018 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 SUPERFAMILY SSF51445 163 600 3.46E-116 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 612 708 1.0E-21 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 SUPERFAMILY SSF51011 607 709 1.53E-31 T 28-03-2018 AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 SUPERFAMILY SSF81296 123 177 3.78E-10 T 28-03-2018 IPR014756 Immunoglobulin E-set AL504_RS29055 1d0e6349aac88351b1f5d3af5cf15de6 711 SMART SM00642 234 603 7.8E-8 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 ProSitePatterns PS00211 ABC transporters family signature. 1091 1105 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Pfam PF00664 ABC transporter transmembrane region 640 900 9.8E-20 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Pfam PF00664 ABC transporter transmembrane region 21 280 2.8E-23 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 SUPERFAMILY SSF52540 946 1189 2.01E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 SUPERFAMILY SSF90123 6 317 3.14E-48 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 SMART SM00382 979 1165 6.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 SMART SM00382 362 548 4.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 SUPERFAMILY SSF52540 329 572 2.57E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 SUPERFAMILY SSF90123 628 941 1.27E-52 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Gene3D G3DSA:1.20.1560.10 5 322 9.0E-35 T 28-03-2018 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Gene3D G3DSA:1.20.1560.10 621 941 2.5E-40 T 28-03-2018 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Gene3D G3DSA:3.40.50.300 323 576 4.2E-71 T 28-03-2018 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Gene3D G3DSA:3.40.50.300 947 1195 5.0E-71 T 28-03-2018 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Pfam PF00005 ABC transporter 970 1119 1.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 Pfam PF00005 ABC transporter 355 501 9.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS07210 e33656cd8299c748a5493aa8681ece90 1204 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS24650 72c11e7ef964e7d9d5aab070ffdb89ba 338 SUPERFAMILY SSF53850 25 254 9.23E-45 T 28-03-2018 AL504_RS24650 72c11e7ef964e7d9d5aab070ffdb89ba 338 SMART SM00062 34 263 4.8E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS24650 72c11e7ef964e7d9d5aab070ffdb89ba 338 Gene3D G3DSA:3.40.190.10 24 136 1.4E-15 T 28-03-2018 AL504_RS24650 72c11e7ef964e7d9d5aab070ffdb89ba 338 Gene3D G3DSA:3.40.190.10 137 275 1.4E-17 T 28-03-2018 AL504_RS24650 72c11e7ef964e7d9d5aab070ffdb89ba 338 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 252 1.4E-27 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS24650 72c11e7ef964e7d9d5aab070ffdb89ba 338 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 Pfam PF11563 Protoglobin 42 175 2.2E-7 T 28-03-2018 AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 466 3.6E-42 T 28-03-2018 IPR000160 GGDEF domain AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 SUPERFAMILY SSF55073 314 468 3.37E-44 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 SMART SM00267 297 470 6.1E-54 T 28-03-2018 IPR000160 GGDEF domain AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 Gene3D G3DSA:3.30.70.270 305 470 4.6E-48 T 28-03-2018 AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 468 2.4E-49 T 28-03-2018 IPR000160 GGDEF domain AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 Gene3D G3DSA:1.10.490.10 34 178 2.7E-10 T 28-03-2018 AL504_RS10755 16b922188b46b86473c399a5f8a3f6a3 470 SUPERFAMILY SSF46458 45 154 4.32E-11 T 28-03-2018 IPR009050 Globin-like AL504_RS18955 362796d02bce45d1b1e668ef4e3b777e 245 Gene3D G3DSA:3.40.50.300 1 242 3.0E-72 T 28-03-2018 AL504_RS18955 362796d02bce45d1b1e668ef4e3b777e 245 Pfam PF00005 ABC transporter 19 167 1.0E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS18955 362796d02bce45d1b1e668ef4e3b777e 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS18955 362796d02bce45d1b1e668ef4e3b777e 245 SUPERFAMILY SSF52540 3 237 2.3E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18955 362796d02bce45d1b1e668ef4e3b777e 245 SMART SM00382 28 215 1.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS18955 362796d02bce45d1b1e668ef4e3b777e 245 PIRSF PIRSF039085 1 242 1.4E-104 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 SUPERFAMILY SSF55904 606 749 1.57E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 151 584 7.8E-153 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 Gene3D G3DSA:3.40.640.10 151 458 4.5E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 392 406 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 145 3.4E-38 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 Gene3D G3DSA:3.90.1150.10 459 634 2.0E-74 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 611 735 5.7E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 SUPERFAMILY SSF53383 151 604 1.61E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 Gene3D G3DSA:3.90.100.10 635 753 1.3E-33 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL504_RS22980 73a93fc1e5774a4b17c6412fc7f020e2 753 PIRSF PIRSF009393 1 753 5.5E-277 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL504_RS30330 bd60e8cf9ffb065d3eeafb35c00ce57d 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 323 8.6E-91 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS30330 bd60e8cf9ffb065d3eeafb35c00ce57d 331 SUPERFAMILY SSF53850 117 293 3.26E-13 T 28-03-2018 AL504_RS30330 bd60e8cf9ffb065d3eeafb35c00ce57d 331 Gene3D G3DSA:3.40.190.10 158 300 9.2E-13 T 28-03-2018 AL504_RS30330 bd60e8cf9ffb065d3eeafb35c00ce57d 331 PIRSF PIRSF017082 3 331 2.8E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 13 248 4.6E-98 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 192 3.1E-4 T 28-03-2018 AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 Gene3D G3DSA:3.40.50.720 3 48 5.1E-11 T 28-03-2018 AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 Gene3D G3DSA:3.40.50.720 49 250 2.5E-66 T 28-03-2018 AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 SUPERFAMILY SSF51735 9 249 1.31E-83 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.5E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.5E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.5E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.5E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.5E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.5E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS12155 6ab009ebd756b8b50b70359a34f2d7e3 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 247 1.1E-66 T 28-03-2018 AL504_RS23850 4384a3aa7c5690ca98e618c134b1cf26 337 SUPERFAMILY SSF102198 70 334 8.11E-43 T 28-03-2018 AL504_RS23850 4384a3aa7c5690ca98e618c134b1cf26 337 Gene3D G3DSA:3.50.30.50 68 335 5.9E-57 T 28-03-2018 AL504_RS23850 4384a3aa7c5690ca98e618c134b1cf26 337 Pfam PF04199 Putative cyclase 73 270 1.8E-31 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS16285 9564c07425a5b3dabe652e4e6c9f0faf 237 SUPERFAMILY SSF52540 1 219 1.7E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16285 9564c07425a5b3dabe652e4e6c9f0faf 237 SMART SM00382 27 214 6.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16285 9564c07425a5b3dabe652e4e6c9f0faf 237 Pfam PF00005 ABC transporter 18 166 8.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16285 9564c07425a5b3dabe652e4e6c9f0faf 237 Gene3D G3DSA:3.40.50.300 1 223 4.1E-61 T 28-03-2018 AL504_RS16285 9564c07425a5b3dabe652e4e6c9f0faf 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05950 f03d23487dc9e662f1f3afa45cc1300b 280 SUPERFAMILY SSF55781 104 273 9.81E-47 T 28-03-2018 IPR029016 GAF domain-like AL504_RS05950 f03d23487dc9e662f1f3afa45cc1300b 280 Gene3D G3DSA:1.10.10.10 27 104 1.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05950 f03d23487dc9e662f1f3afa45cc1300b 280 SUPERFAMILY SSF46785 34 101 1.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05950 f03d23487dc9e662f1f3afa45cc1300b 280 SMART SM00346 30 119 5.2E-6 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS05950 f03d23487dc9e662f1f3afa45cc1300b 280 Pfam PF09339 IclR helix-turn-helix domain 34 79 5.2E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS05950 f03d23487dc9e662f1f3afa45cc1300b 280 Gene3D G3DSA:3.30.450.40 106 279 1.6E-49 T 28-03-2018 IPR029016 GAF domain-like AL504_RS05950 f03d23487dc9e662f1f3afa45cc1300b 280 Pfam PF01614 Bacterial transcriptional regulator 151 270 3.8E-30 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 PRINTS PR00143 Citrate synthase signature 276 296 5.1E-35 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 PRINTS PR00143 Citrate synthase signature 201 216 5.1E-35 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 PRINTS PR00143 Citrate synthase signature 151 164 5.1E-35 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 PRINTS PR00143 Citrate synthase signature 223 251 5.1E-35 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 PRINTS PR00143 Citrate synthase signature 353 367 5.1E-35 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 PRINTS PR00143 Citrate synthase signature 333 349 5.1E-35 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 PIRSF PIRSF001369 27 401 1.9E-110 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 ProSitePatterns PS00480 Citrate synthase signature. 283 295 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 Pfam PF00285 Citrate synthase, C-terminal domain 34 383 9.3E-113 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 Gene3D G3DSA:1.10.580.10 40 380 1.9E-79 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 33 400 9.3E-158 T 28-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AL504_RS11790 270a902581fbba215d74c7ac5d027bdc 401 SUPERFAMILY SSF48256 33 400 7.2E-123 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS14325 f83a1064cf6aebf3220be528b8eb20ee 412 SUPERFAMILY SSF89796 5 405 4.84E-142 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS14325 f83a1064cf6aebf3220be528b8eb20ee 412 Gene3D G3DSA:3.40.50.10540 1 407 1.0E-154 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS14325 f83a1064cf6aebf3220be528b8eb20ee 412 Pfam PF02515 CoA-transferase family III 7 385 8.3E-131 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS23315 b047f670198f1cb360d8e4f649ef8e98 764 Gene3D G3DSA:2.40.170.20 195 764 7.8E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23315 b047f670198f1cb360d8e4f649ef8e98 764 Pfam PF00593 TonB dependent receptor 439 762 9.6E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23315 b047f670198f1cb360d8e4f649ef8e98 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 179 1.0E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS23315 b047f670198f1cb360d8e4f649ef8e98 764 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 747 764 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS23315 b047f670198f1cb360d8e4f649ef8e98 764 SUPERFAMILY SSF56935 39 764 1.21E-111 T 28-03-2018 AL504_RS23315 b047f670198f1cb360d8e4f649ef8e98 764 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 764 2.0E-91 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS23315 b047f670198f1cb360d8e4f649ef8e98 764 Gene3D G3DSA:2.170.130.10 37 189 6.4E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00915 11022c3eab7ab843230f4202c41e203c 762 Pfam PF00593 TonB dependent receptor 302 760 1.8E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00915 11022c3eab7ab843230f4202c41e203c 762 Gene3D G3DSA:2.170.130.10 74 224 1.4E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00915 11022c3eab7ab843230f4202c41e203c 762 SUPERFAMILY SSF56935 74 762 3.21E-131 T 28-03-2018 AL504_RS00915 11022c3eab7ab843230f4202c41e203c 762 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 114 761 4.4E-117 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS00915 11022c3eab7ab843230f4202c41e203c 762 Gene3D G3DSA:2.40.170.20 231 762 6.6E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00915 11022c3eab7ab843230f4202c41e203c 762 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 218 9.6E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS20350 36d61301fbeec21baaf69ba3c73603f6 436 Gene3D G3DSA:3.40.640.10 165 300 2.4E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS20350 36d61301fbeec21baaf69ba3c73603f6 436 Gene3D G3DSA:3.90.1150.10 301 410 0.0018 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS20350 36d61301fbeec21baaf69ba3c73603f6 436 Gene3D G3DSA:3.90.1150.10 1 164 7.2E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS20350 36d61301fbeec21baaf69ba3c73603f6 436 SUPERFAMILY SSF53383 4 408 1.11E-75 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS20350 36d61301fbeec21baaf69ba3c73603f6 436 Pfam PF00202 Aminotransferase class-III 37 347 2.3E-37 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS24020 e738dc4668df629c6b40f9fbda34f0f0 321 PIRSF PIRSF017082 2 320 2.3E-67 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS24020 e738dc4668df629c6b40f9fbda34f0f0 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 316 3.1E-65 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS24020 e738dc4668df629c6b40f9fbda34f0f0 321 Gene3D G3DSA:3.40.190.10 11 289 1.6E-5 T 28-03-2018 AL504_RS12080 cf248cbc5725de74fbaaa79af2e8269e 325 SUPERFAMILY SSF53187 8 313 5.29E-46 T 28-03-2018 AL504_RS12080 cf248cbc5725de74fbaaa79af2e8269e 325 Gene3D G3DSA:3.40.630.10 27 287 3.7E-24 T 28-03-2018 AL504_RS12080 cf248cbc5725de74fbaaa79af2e8269e 325 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 34 313 2.2E-38 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL504_RS12080 cf248cbc5725de74fbaaa79af2e8269e 325 PIRSF PIRSF039012 3 318 2.4E-70 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL504_RS16880 0c223cb757ebbb2640d165259b686ab7 352 SUPERFAMILY SSF53383 12 350 2.99E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS16880 0c223cb757ebbb2640d165259b686ab7 352 Gene3D G3DSA:3.90.1150.10 257 352 5.4E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS16880 0c223cb757ebbb2640d165259b686ab7 352 PIRSF PIRSF038940 10 352 8.3E-157 T 28-03-2018 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 AL504_RS16880 0c223cb757ebbb2640d165259b686ab7 352 Gene3D G3DSA:3.40.640.10 22 256 5.1E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS16880 0c223cb757ebbb2640d165259b686ab7 352 Pfam PF01212 Beta-eliminating lyase 13 298 1.3E-59 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL504_RS05440 427c9953f367946dce8a660044eff828 576 SUPERFAMILY SSF53850 66 516 1.47E-62 T 28-03-2018 AL504_RS05440 427c9953f367946dce8a660044eff828 576 Gene3D G3DSA:3.40.190.10 187 527 6.8E-33 T 28-03-2018 AL504_RS05440 427c9953f367946dce8a660044eff828 576 PIRSF PIRSF035859 1 575 0.0 T 28-03-2018 IPR014597 ABC transporter, periplasmic substrate-binding protein, predicted GO:0005215 AL504_RS05440 427c9953f367946dce8a660044eff828 576 Pfam PF01547 Bacterial extracellular solute-binding protein 82 424 7.1E-12 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AL504_RS20765 843691eb1253f513f240653e3c77a51b 220 SUPERFAMILY SSF48613 1 213 1.23E-66 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS20765 843691eb1253f513f240653e3c77a51b 220 Gene3D G3DSA:1.20.910.10 1 220 1.2E-57 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS20765 843691eb1253f513f240653e3c77a51b 220 Pfam PF03070 TENA/THI-4/PQQC family 22 214 1.2E-37 T 28-03-2018 IPR004305 Thiaminase-2/PQQC AL504_RS20765 843691eb1253f513f240653e3c77a51b 220 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 18 214 9.4E-42 T 28-03-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 AL504_RS22370 087934bf40f6658c7b37949f1e4d9477 450 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 10 111 5.4E-26 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL504_RS22370 087934bf40f6658c7b37949f1e4d9477 450 Pfam PF13657 HipA N-terminal domain 11 111 2.4E-20 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL504_RS22370 087934bf40f6658c7b37949f1e4d9477 450 Pfam PF07804 HipA-like C-terminal domain 159 415 2.1E-47 T 28-03-2018 IPR012893 HipA-like, C-terminal AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 SUPERFAMILY SSF55811 223 344 2.44E-25 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 SUPERFAMILY SSF48150 6 227 1.46E-70 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 Pfam PF00633 Helix-hairpin-helix motif 102 128 1.9E-5 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 268 6.8E-103 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 SMART SM00478 39 193 1.3E-42 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 Gene3D G3DSA:1.10.1670.10 119 227 7.3E-33 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 166 1.4E-20 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 Pfam PF14815 NUDIX domain 238 344 6.9E-25 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 195 211 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 Gene3D G3DSA:3.90.79.10 228 356 1.8E-14 T 28-03-2018 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 195 211 4.3E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL504_RS16315 c8e4b010a98948afc165d5110db52370 358 Gene3D G3DSA:1.10.340.30 21 118 2.2E-33 T 28-03-2018 AL504_RS01780 a543f74c065d4c1af332f869735e08a9 414 Pfam PF04286 Protein of unknown function (DUF445) 35 410 2.1E-103 T 28-03-2018 IPR007383 Protein of unknown function DUF445 AL504_RS01780 a543f74c065d4c1af332f869735e08a9 414 Gene3D G3DSA:1.25.10.10 2 407 1.7E-6 T 28-03-2018 IPR011989 Armadillo-like helical AL504_RS18465 0fbc67e0448b7334cb48043a6591321d 402 SUPERFAMILY SSF51556 61 356 1.59E-85 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS18465 0fbc67e0448b7334cb48043a6591321d 402 Gene3D G3DSA:2.30.40.10 4 73 9.5E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS18465 0fbc67e0448b7334cb48043a6591321d 402 Gene3D G3DSA:3.20.20.140 74 353 6.1E-45 T 28-03-2018 AL504_RS18465 0fbc67e0448b7334cb48043a6591321d 402 Pfam PF01979 Amidohydrolase family 57 396 3.3E-31 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS18465 0fbc67e0448b7334cb48043a6591321d 402 SUPERFAMILY SSF51338 3 61 1.32E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS18465 0fbc67e0448b7334cb48043a6591321d 402 SUPERFAMILY SSF51338 356 399 1.32E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS05215 0b25d219a68864643e8cb109fa5e81a3 195 SUPERFAMILY SSF54980 129 192 6.55E-10 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS05215 0b25d219a68864643e8cb109fa5e81a3 195 Pfam PF09186 Domain of unknown function (DUF1949) 132 188 1.7E-10 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AL504_RS05215 0b25d219a68864643e8cb109fa5e81a3 195 Gene3D G3DSA:3.30.70.240 130 189 4.4E-13 T 28-03-2018 AL504_RS05215 0b25d219a68864643e8cb109fa5e81a3 195 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 2.8E-29 T 28-03-2018 IPR001498 Impact, N-terminal AL504_RS05215 0b25d219a68864643e8cb109fa5e81a3 195 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 28-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AL504_RS05215 0b25d219a68864643e8cb109fa5e81a3 195 Gene3D G3DSA:3.30.230.30 1 125 1.6E-41 T 28-03-2018 IPR001498 Impact, N-terminal AL504_RS05215 0b25d219a68864643e8cb109fa5e81a3 195 SUPERFAMILY SSF54211 4 122 1.44E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS07445 50b6b629605e68e687d9e49a31c64beb 567 SUPERFAMILY SSF52016 370 556 8.63E-55 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS07445 50b6b629605e68e687d9e49a31c64beb 567 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 117 127 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS07445 50b6b629605e68e687d9e49a31c64beb 567 Gene3D G3DSA:3.20.20.390 375 560 0.2 T 28-03-2018 AL504_RS07445 50b6b629605e68e687d9e49a31c64beb 567 Gene3D G3DSA:3.20.20.390 30 349 0.11 T 28-03-2018 AL504_RS07445 50b6b629605e68e687d9e49a31c64beb 567 SUPERFAMILY SSF143975 8 369 7.59E-113 T 28-03-2018 AL504_RS07445 50b6b629605e68e687d9e49a31c64beb 567 Pfam PF00920 Dehydratase family 34 549 5.1E-172 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Pfam PF13746 4Fe-4S dicluster domain 232 338 6.6E-43 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 285 296 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Pfam PF12801 4Fe-4S binding domain 108 150 7.0E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Gene3D G3DSA:2.60.40.10 373 494 3.2E-25 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 309 320 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Gene3D G3DSA:3.30.70.20 304 317 0.032 T 28-03-2018 AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 373 495 4.0E-25 T 28-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Gene3D G3DSA:1.10.1060.10 318 358 6.7E-4 T 28-03-2018 AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Gene3D G3DSA:3.30.70.20 289 303 0.078 T 28-03-2018 AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 Gene3D G3DSA:3.30.70.20 235 288 6.2E-11 T 28-03-2018 AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 54 482 6.8E-149 T 28-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 SUPERFAMILY SSF54862 186 369 2.43E-33 T 28-03-2018 AL504_RS28130 c1d68db56c41230fc54ba641858b5274 496 SUPERFAMILY SSF54862 118 140 2.43E-33 T 28-03-2018 AL504_RS23690 63e00da455e31405f5a70c0e467b5544 312 Gene3D G3DSA:1.10.10.10 2 84 1.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23690 63e00da455e31405f5a70c0e467b5544 312 SUPERFAMILY SSF46785 3 110 6.26E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23690 63e00da455e31405f5a70c0e467b5544 312 Pfam PF03466 LysR substrate binding domain 88 294 4.8E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS23690 63e00da455e31405f5a70c0e467b5544 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.7E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23690 63e00da455e31405f5a70c0e467b5544 312 Gene3D G3DSA:3.40.190.10 177 264 2.8E-20 T 28-03-2018 AL504_RS23690 63e00da455e31405f5a70c0e467b5544 312 SUPERFAMILY SSF53850 88 296 5.79E-38 T 28-03-2018 AL504_RS23690 63e00da455e31405f5a70c0e467b5544 312 Gene3D G3DSA:3.40.190.10 93 176 1.5E-16 T 28-03-2018 AL504_RS00600 fdcd938f354d008e61d5f595323d0b33 312 SMART SM01130 6 308 5.7E-66 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS00600 fdcd938f354d008e61d5f595323d0b33 312 Pfam PF00701 Dihydrodipicolinate synthetase family 7 303 6.7E-33 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS00600 fdcd938f354d008e61d5f595323d0b33 312 PIRSF PIRSF001365 4 312 3.7E-54 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS00600 fdcd938f354d008e61d5f595323d0b33 312 SUPERFAMILY SSF51569 4 310 7.85E-65 T 28-03-2018 AL504_RS00600 fdcd938f354d008e61d5f595323d0b33 312 Gene3D G3DSA:3.20.20.70 3 310 1.9E-67 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS17445 35674c3857b00e14a61cd6d939c9e6e4 567 Gene3D G3DSA:1.20.1250.20 238 432 5.5E-13 T 28-03-2018 AL504_RS17445 35674c3857b00e14a61cd6d939c9e6e4 567 Pfam PF05977 Transmembrane secretion effector 30 547 6.2E-188 T 28-03-2018 IPR010290 Transmembrane secretion effector AL504_RS17445 35674c3857b00e14a61cd6d939c9e6e4 567 SUPERFAMILY SSF103473 39 422 4.45E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17445 35674c3857b00e14a61cd6d939c9e6e4 567 Gene3D G3DSA:1.20.1250.20 28 233 6.1E-24 T 28-03-2018 AL504_RS12320 5e294982cb48dd68c9230a4c0902510c 404 SUPERFAMILY SSF53822 32 402 3.21E-92 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS12320 5e294982cb48dd68c9230a4c0902510c 404 Pfam PF13458 Periplasmic binding protein 32 367 1.1E-90 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS12320 5e294982cb48dd68c9230a4c0902510c 404 Gene3D G3DSA:3.40.50.2300 28 207 3.6E-31 T 28-03-2018 AL504_RS12320 5e294982cb48dd68c9230a4c0902510c 404 Gene3D G3DSA:3.40.50.2300 208 356 8.5E-13 T 28-03-2018 AL504_RS10940 693d56aadac7eea23b2c794416aa30e1 376 Gene3D G3DSA:3.40.50.20 1 71 2.7E-5 T 28-03-2018 AL504_RS10940 693d56aadac7eea23b2c794416aa30e1 376 Pfam PF01266 FAD dependent oxidoreductase 5 370 7.2E-34 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS10940 693d56aadac7eea23b2c794416aa30e1 376 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 5 368 1.1E-135 T 28-03-2018 IPR017741 FAD-dependent oxidoreductase, HpnW AL504_RS10940 693d56aadac7eea23b2c794416aa30e1 376 Gene3D G3DSA:3.30.9.10 72 335 2.7E-14 T 28-03-2018 AL504_RS10940 693d56aadac7eea23b2c794416aa30e1 376 SUPERFAMILY SSF51905 3 213 2.46E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 Pfam PF08402 TOBE domain 293 373 3.1E-15 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 373 3.1E-124 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 SMART SM00382 42 227 1.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 Pfam PF00005 ABC transporter 34 175 4.1E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 Gene3D G3DSA:2.40.50.140 296 366 0.0018 T 28-03-2018 AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 SUPERFAMILY SSF52540 18 257 1.61E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 SUPERFAMILY SSF50331 251 372 1.81E-14 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS10005 6463b3cf694e21faed766eca51b3b699 375 Gene3D G3DSA:3.40.50.300 14 253 2.8E-72 T 28-03-2018 AL504_RS13275 1ca80d0c5b74827425c38aa8125e4d96 143 Pfam PF01042 Endoribonuclease L-PSP 28 134 1.1E-26 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS13275 1ca80d0c5b74827425c38aa8125e4d96 143 SUPERFAMILY SSF55298 26 135 2.98E-34 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS13275 1ca80d0c5b74827425c38aa8125e4d96 143 Gene3D G3DSA:3.30.1330.40 25 142 6.6E-32 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 SUPERFAMILY SSF46785 6 87 1.88E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 4.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 Pfam PF03466 LysR substrate binding domain 94 294 2.4E-32 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 Gene3D G3DSA:3.40.190.10 95 182 2.2E-15 T 28-03-2018 AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 Gene3D G3DSA:3.40.190.10 183 265 1.5E-16 T 28-03-2018 AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 SUPERFAMILY SSF53850 94 297 4.21E-34 T 28-03-2018 AL504_RS05065 4c6b32b2263a58c8a3602f8546f9dd07 302 Gene3D G3DSA:1.10.10.10 7 89 1.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05560 44c5ade992ffa013eaca4a06c61adbbb 113 SUPERFAMILY SSF46785 9 108 5.98E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05560 44c5ade992ffa013eaca4a06c61adbbb 113 Gene3D G3DSA:1.10.10.10 1 107 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05560 44c5ade992ffa013eaca4a06c61adbbb 113 Pfam PF12840 Helix-turn-helix domain 18 91 9.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05560 44c5ade992ffa013eaca4a06c61adbbb 113 SMART SM00418 19 111 3.8E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 Gene3D G3DSA:3.40.1770.10 4 143 2.3E-15 T 28-03-2018 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 Gene3D G3DSA:3.40.1770.10 187 544 7.2E-132 T 28-03-2018 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 Pfam PF17391 Urocanase N-terminal domain 8 129 3.8E-44 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 Pfam PF01175 Urocanase Rossmann-like domain 132 340 7.9E-78 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 Hamap MF_00577 Urocanate hydratase [hutU]. 1 550 43.666 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 PIRSF PIRSF001423 1 550 8.2E-246 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 SUPERFAMILY SSF111326 2 543 2.22E-221 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 TIGRFAM TIGR01228 hutU: urocanate hydratase 4 542 2.0E-213 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS22705 b07c43b8a38d850db1267689550c31d7 551 Pfam PF17392 Urocanase C-terminal domain 343 536 2.7E-77 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS30085 c4f8394dffbf2805c659ca6b3552be5d 688 SUPERFAMILY SSF56935 6 687 1.23E-123 T 28-03-2018 AL504_RS30085 c4f8394dffbf2805c659ca6b3552be5d 688 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 45 686 6.6E-126 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS30085 c4f8394dffbf2805c659ca6b3552be5d 688 Gene3D G3DSA:2.40.170.20 150 687 8.9E-85 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS30085 c4f8394dffbf2805c659ca6b3552be5d 688 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 140 3.7E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30085 c4f8394dffbf2805c659ca6b3552be5d 688 Pfam PF00593 TonB dependent receptor 261 686 9.5E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS30085 c4f8394dffbf2805c659ca6b3552be5d 688 Gene3D G3DSA:2.170.130.10 10 149 4.0E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82693 155 191 2.96E-19 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82693 277 333 2.96E-19 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 Gene3D G3DSA:3.30.2090.10 190 277 1.3E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82866 815 1040 1.15E-56 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 Gene3D G3DSA:3.30.70.1430 568 670 1.1E-15 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82693 573 668 1.78E-8 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82714 726 816 3.14E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 Gene3D G3DSA:1.20.1640.10 821 1040 2.2E-40 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 7.5E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 7.5E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 7.5E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 7.5E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.5E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82693 42 128 2.28E-22 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 Gene3D G3DSA:3.30.70.1430 42 135 1.3E-23 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82714 193 275 8.24E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 Gene3D G3DSA:3.30.2090.10 725 819 8.1E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 Gene3D G3DSA:1.20.1640.10 294 519 3.3E-39 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 SUPERFAMILY SSF82866 299 506 1.83E-36 T 28-03-2018 AL504_RS17565 fc7d643d12ee336c2d3589fb67c22d4c 1060 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1046 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AL504_RS13480 f4d9218c7f30b6666d9bb24d07d35ce4 178 Gene3D G3DSA:3.30.1450.10 42 117 3.0E-17 T 28-03-2018 AL504_RS13480 f4d9218c7f30b6666d9bb24d07d35ce4 178 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 14 120 27.104 T 28-03-2018 IPR026592 Outer membrane protein assembly factor BamE AL504_RS13480 f4d9218c7f30b6666d9bb24d07d35ce4 178 Pfam PF04355 SmpA / OmlA family 42 111 7.7E-25 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AL504_RS06285 eb04666283d0c6597ece7af75c137b4c 142 Pfam PF02561 Flagellar protein FliS 23 131 3.1E-33 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL504_RS06285 eb04666283d0c6597ece7af75c137b4c 142 PIRSF PIRSF039090 9 140 3.3E-33 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL504_RS06285 eb04666283d0c6597ece7af75c137b4c 142 TIGRFAM TIGR00208 fliS: flagellar protein FliS 15 134 6.9E-25 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL504_RS06285 eb04666283d0c6597ece7af75c137b4c 142 SUPERFAMILY SSF101116 16 131 1.1E-32 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL504_RS06285 eb04666283d0c6597ece7af75c137b4c 142 Gene3D G3DSA:1.20.120.340 9 135 9.5E-35 T 28-03-2018 AL504_RS02505 b446a18a7084b5817595b31bc7c04c75 396 Gene3D G3DSA:1.20.1250.20 2 197 6.0E-19 T 28-03-2018 AL504_RS02505 b446a18a7084b5817595b31bc7c04c75 396 PIRSF PIRSF004925 4 395 4.0E-90 T 28-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AL504_RS02505 b446a18a7084b5817595b31bc7c04c75 396 Pfam PF12832 MFS_1 like family 12 360 6.4E-51 T 28-03-2018 IPR024989 Major facilitator superfamily associated domain AL504_RS02505 b446a18a7084b5817595b31bc7c04c75 396 SUPERFAMILY SSF103473 11 389 2.88E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS02505 b446a18a7084b5817595b31bc7c04c75 396 Gene3D G3DSA:1.20.1250.20 198 389 9.5E-19 T 28-03-2018 AL504_RS27395 def1e1f182275bb36f442b0b8a2c1be8 344 SMART SM00382 51 243 3.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS27395 def1e1f182275bb36f442b0b8a2c1be8 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 329 2.8E-29 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS27395 def1e1f182275bb36f442b0b8a2c1be8 344 SUPERFAMILY SSF52540 51 314 1.33E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27395 def1e1f182275bb36f442b0b8a2c1be8 344 Pfam PF00005 ABC transporter 43 193 2.1E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS27395 def1e1f182275bb36f442b0b8a2c1be8 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 309 5.1E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS27395 def1e1f182275bb36f442b0b8a2c1be8 344 Gene3D G3DSA:3.40.50.300 24 339 6.3E-76 T 28-03-2018 AL504_RS27395 def1e1f182275bb36f442b0b8a2c1be8 344 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS16180 449645fe0a10a94baacf790714ca3aad 296 Hamap MF_01805 Segregation and condensation protein A [scpA]. 54 288 20.882 T 28-03-2018 IPR003768 Segregation and condensation protein A AL504_RS16180 449645fe0a10a94baacf790714ca3aad 296 Gene3D G3DSA:1.10.10.580 216 286 5.4E-13 T 28-03-2018 AL504_RS16180 449645fe0a10a94baacf790714ca3aad 296 Pfam PF02616 Segregation and condensation protein ScpA 71 286 2.5E-33 T 28-03-2018 IPR003768 Segregation and condensation protein A AL504_RS18855 f9e6863255d5716a6ded1c204d84a6ae 142 PIRSF PIRSF004638 1 142 2.7E-23 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 AL504_RS18855 f9e6863255d5716a6ded1c204d84a6ae 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 3 142 2.7E-17 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 AL504_RS01520 fa9b3733ae8586953ac309a83cb1c1a5 167 SUPERFAMILY SSF54637 39 159 5.65E-33 T 28-03-2018 IPR029069 HotDog domain AL504_RS01520 fa9b3733ae8586953ac309a83cb1c1a5 167 Gene3D G3DSA:3.10.129.10 27 163 9.7E-30 T 28-03-2018 AL504_RS01520 fa9b3733ae8586953ac309a83cb1c1a5 167 Pfam PF03061 Thioesterase superfamily 75 152 8.6E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS01520 fa9b3733ae8586953ac309a83cb1c1a5 167 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 46 160 1.3E-21 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.7E-43 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 Pfam PF00700 Bacterial flagellin C-terminal helical region 477 562 3.9E-29 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 Gene3D G3DSA:1.20.1330.10 362 535 5.5E-21 T 28-03-2018 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 PRINTS PR00207 Flagellin signature 37 54 2.2E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 PRINTS PR00207 Flagellin signature 111 134 2.2E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 PRINTS PR00207 Flagellin signature 76 95 2.2E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 Gene3D G3DSA:1.20.1330.10 44 361 5.3E-38 T 28-03-2018 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 Pfam PF12445 Flagellin protein 335 468 2.4E-16 T 28-03-2018 IPR032826 Flagellin, H7-serospecific domain AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 SUPERFAMILY SSF64518 289 563 4.05E-35 T 28-03-2018 AL504_RS27595 de048555ff66e2d05680612a761f85bb 563 SUPERFAMILY SSF64518 1 342 1.83E-66 T 28-03-2018 AL504_RS29580 ab7f2f382c39dc1f8c4198ec79f2662f 226 Gene3D G3DSA:3.40.50.1860 18 118 5.9E-6 T 28-03-2018 AL504_RS29580 ab7f2f382c39dc1f8c4198ec79f2662f 226 Pfam PF01177 Asp/Glu/Hydantoin racemase 59 218 7.4E-11 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS29580 ab7f2f382c39dc1f8c4198ec79f2662f 226 Gene3D G3DSA:3.40.50.1860 119 210 6.2E-12 T 28-03-2018 AL504_RS26995 c9ba086ca26694bc8ea874aeedf85aeb 384 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 52 100 3.5E-12 T 28-03-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247 AL504_RS26995 c9ba086ca26694bc8ea874aeedf85aeb 384 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 103 358 1.3E-101 T 28-03-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247 AL504_RS22625 3e0f121f9d22682654dc95cdb3c80035 394 SUPERFAMILY SSF54506 2 182 5.81E-70 T 28-03-2018 AL504_RS22625 3e0f121f9d22682654dc95cdb3c80035 394 Gene3D G3DSA:3.10.310.10 200 372 1.1E-69 T 28-03-2018 AL504_RS22625 3e0f121f9d22682654dc95cdb3c80035 394 Pfam PF04303 PrpF protein 6 390 1.7E-173 T 28-03-2018 IPR007400 PrpF protein AL504_RS22625 3e0f121f9d22682654dc95cdb3c80035 394 Gene3D G3DSA:3.10.310.10 5 199 2.0E-85 T 28-03-2018 AL504_RS22625 3e0f121f9d22682654dc95cdb3c80035 394 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 391 4.9E-226 T 28-03-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AL504_RS22625 3e0f121f9d22682654dc95cdb3c80035 394 SUPERFAMILY SSF54506 188 390 1.1E-74 T 28-03-2018 AL504_RS25305 1ad66f1ea49bf5ad6ce2d2c9de895fac 154 Gene3D G3DSA:3.40.630.30 3 147 3.8E-25 T 28-03-2018 AL504_RS25305 1ad66f1ea49bf5ad6ce2d2c9de895fac 154 SUPERFAMILY SSF55729 5 135 1.45E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS25305 1ad66f1ea49bf5ad6ce2d2c9de895fac 154 Pfam PF13673 Acetyltransferase (GNAT) domain 61 139 8.1E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS31110 e53738a83f111facd74d01322b66bcf5 183 Pfam PF01292 Prokaryotic cytochrome b561 11 181 5.0E-26 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL504_RS31110 e53738a83f111facd74d01322b66bcf5 183 Gene3D G3DSA:1.20.950.20 8 183 4.8E-28 T 28-03-2018 AL504_RS31110 e53738a83f111facd74d01322b66bcf5 183 SUPERFAMILY SSF81342 10 181 4.71E-27 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 Gene3D G3DSA:1.10.1670.10 118 210 5.0E-31 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.735 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.9E-9 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 SMART SM00525 186 206 5.0E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 SUPERFAMILY SSF48150 3 208 9.89E-74 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 SMART SM00478 38 185 1.1E-57 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 PIRSF PIRSF001435 1 210 2.8E-52 T 28-03-2018 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.5E-20 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 Gene3D G3DSA:1.10.340.30 9 117 4.6E-26 T 28-03-2018 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.0E-85 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL504_RS12305 b7411dd2a0ddfd55888ea06f9d8eed29 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 9.1E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 SMART SM00387 348 458 2.7E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Pfam PF08521 Two-component sensor kinase N-terminal 24 162 1.2E-33 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Gene3D G3DSA:3.40.190.10 618 745 1.4E-17 T 28-03-2018 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 SUPERFAMILY SSF55874 292 457 1.44E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 301 1.3E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 SUPERFAMILY SSF53850 508 780 2.02E-40 T 28-03-2018 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 2.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 2.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 2.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 2.2E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Gene3D G3DSA:1.20.5.1040 129 186 1.7E-5 T 28-03-2018 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Gene3D G3DSA:1.10.287.130 221 297 7.2E-9 T 28-03-2018 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Gene3D G3DSA:3.40.190.10 504 617 1.8E-10 T 28-03-2018 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 SUPERFAMILY SSF47384 221 298 6.67E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 SMART SM00388 238 303 7.6E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Pfam PF13531 Bacterial extracellular solute-binding protein 509 764 8.5E-16 T 28-03-2018 AL504_RS15830 fbc69b1793085f06bce821d1992cfdde 828 Gene3D G3DSA:3.30.565.10 309 464 9.6E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 Gene3D G3DSA:2.102.10.10 30 146 1.2E-22 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 Pfam PF00355 Rieske [2Fe-2S] domain 40 124 4.0E-19 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 1.5E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 185 207 1.5E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 143 169 1.5E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 54 69 1.5E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 75 95 1.5E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 97 117 1.5E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 SUPERFAMILY SSF55961 159 434 8.63E-53 T 28-03-2018 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 197 431 3.6E-9 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 SUPERFAMILY SSF50022 10 155 4.32E-44 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS15980 00919a52a5b16f4021f0e4e68c7c9903 447 Gene3D G3DSA:3.90.380.10 147 438 2.8E-50 T 28-03-2018 AL504_RS19320 d7ea1fed3939b8cb0bf373beeb07a81d 530 Gene3D G3DSA:1.20.1250.20 13 212 1.8E-21 T 28-03-2018 AL504_RS19320 d7ea1fed3939b8cb0bf373beeb07a81d 530 Gene3D G3DSA:1.20.1250.20 220 412 4.5E-17 T 28-03-2018 AL504_RS19320 d7ea1fed3939b8cb0bf373beeb07a81d 530 SUPERFAMILY SSF103473 18 403 3.4E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS19320 d7ea1fed3939b8cb0bf373beeb07a81d 530 Pfam PF05977 Transmembrane secretion effector 11 527 1.1E-206 T 28-03-2018 IPR010290 Transmembrane secretion effector AL504_RS19320 d7ea1fed3939b8cb0bf373beeb07a81d 530 Gene3D G3DSA:3.30.70.100 421 528 9.2E-4 T 28-03-2018 AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 SUPERFAMILY SSF52922 718 875 9.26E-44 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 144 313 3.2E-8 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 14 876 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 SUPERFAMILY SSF52518 484 712 2.22E-92 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 TIGRFAM TIGR03186 AKGDH_not_PDH: alpha-ketoglutarate dehydrogenase 15 894 0.0 T 28-03-2018 IPR017600 Alpha-ketoglutarate dehydrogenase AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 Gene3D G3DSA:3.40.50.970 483 717 1.4E-63 T 28-03-2018 AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 Gene3D G3DSA:3.40.50.970 64 482 9.1E-82 T 28-03-2018 AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 SUPERFAMILY SSF52518 65 478 1.87E-123 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 Gene3D G3DSA:3.40.50.920 720 890 6.6E-37 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 SMART SM00861 505 710 0.0059 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS11725 80b503193cffe6af448dc80c6f5b2aa4 895 PIRSF PIRSF000156 5 890 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL504_RS06725 479ec7a94a11976f4e79e5c71aa47113 472 Gene3D G3DSA:1.20.1250.20 265 472 7.5E-26 T 28-03-2018 AL504_RS06725 479ec7a94a11976f4e79e5c71aa47113 472 Gene3D G3DSA:1.20.1250.20 23 213 2.8E-29 T 28-03-2018 AL504_RS06725 479ec7a94a11976f4e79e5c71aa47113 472 SUPERFAMILY SSF103473 21 209 1.24E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS06725 479ec7a94a11976f4e79e5c71aa47113 472 SUPERFAMILY SSF103473 261 468 1.24E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS06725 479ec7a94a11976f4e79e5c71aa47113 472 Pfam PF07690 Major Facilitator Superfamily 31 424 4.6E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS06725 479ec7a94a11976f4e79e5c71aa47113 472 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 29 432 4.8E-71 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 6.2E-9 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 251 286 1.0E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 171 204 7.0E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 38 358 5.6E-107 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 SUPERFAMILY SSF51161 49 345 1.79E-80 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Gene3D G3DSA:2.160.10.10 170 335 8.7E-43 T 28-03-2018 AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Gene3D G3DSA:2.160.10.10 119 169 1.0E-14 T 28-03-2018 AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 155 183 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 288 321 9.7E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 229 245 0.029 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 355 36.577 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL504_RS06150 5fe82dbf07de66625cfb3fd8664aeccf 365 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 39 112 3.4E-21 T 28-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AL504_RS20665 2aaa6d4336647225604abe4859614e7a 346 Gene3D G3DSA:3.40.50.2000 1 169 2.2E-10 T 28-03-2018 AL504_RS20665 2aaa6d4336647225604abe4859614e7a 346 Pfam PF00534 Glycosyl transferases group 1 177 290 4.6E-21 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS20665 2aaa6d4336647225604abe4859614e7a 346 Pfam PF13439 Glycosyltransferase Family 4 15 165 1.9E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS20665 2aaa6d4336647225604abe4859614e7a 346 SUPERFAMILY SSF53756 1 327 3.22E-64 T 28-03-2018 AL504_RS20665 2aaa6d4336647225604abe4859614e7a 346 Gene3D G3DSA:3.40.50.2000 170 319 1.3E-31 T 28-03-2018 AL504_RS14770 451d3bba6278e252d4845b05a5158d1c 389 Pfam PF00953 Glycosyl transferase family 4 99 307 1.6E-34 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL504_RS14770 451d3bba6278e252d4845b05a5158d1c 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 389 4.5E-122 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS14770 451d3bba6278e252d4845b05a5158d1c 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS14770 451d3bba6278e252d4845b05a5158d1c 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 2.6E-4 T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS14770 451d3bba6278e252d4845b05a5158d1c 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS14770 451d3bba6278e252d4845b05a5158d1c 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.553 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 Pfam PF07729 FCD domain 77 213 1.5E-19 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 SUPERFAMILY SSF48008 72 220 2.62E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 Gene3D G3DSA:1.20.120.530 63 229 2.3E-29 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 SMART SM00345 8 66 5.4E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 SUPERFAMILY SSF46785 6 95 1.97E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 Gene3D G3DSA:1.10.10.10 2 62 2.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 66 1.2E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03885 0644d3e8907357d9e13f42908b9a951f 244 SMART SM00895 76 216 1.5E-20 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS30175 4c48a255c83833bf502f92187a97e3ad 222 Gene3D G3DSA:1.10.10.60 13 55 5.2E-12 T 28-03-2018 AL504_RS30175 4c48a255c83833bf502f92187a97e3ad 222 Gene3D G3DSA:1.10.260.40 56 172 3.8E-8 T 28-03-2018 AL504_RS30175 4c48a255c83833bf502f92187a97e3ad 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 71 4.2E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS30175 4c48a255c83833bf502f92187a97e3ad 222 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS30175 4c48a255c83833bf502f92187a97e3ad 222 SUPERFAMILY SSF46689 19 91 4.34E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 SMART SM00345 22 81 7.1E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 Pfam PF07729 FCD domain 106 232 5.9E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 2.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 2.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 SMART SM00895 105 233 2.3E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 Gene3D G3DSA:1.10.10.10 10 81 3.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 4.0E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 SUPERFAMILY SSF48008 102 240 3.14E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 SUPERFAMILY SSF46785 13 85 8.88E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23205 031e2bdb1982c9e0699a74bcdbca6b85 242 Gene3D G3DSA:1.20.120.530 90 242 6.9E-29 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS27075 9072511b3643beb3391b68d1adb4d945 252 Gene3D G3DSA:3.40.190.10 21 121 5.8E-15 T 28-03-2018 AL504_RS27075 9072511b3643beb3391b68d1adb4d945 252 Gene3D G3DSA:3.40.190.10 203 251 0.0012 T 28-03-2018 AL504_RS27075 9072511b3643beb3391b68d1adb4d945 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 248 5.5E-59 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AL504_RS27075 9072511b3643beb3391b68d1adb4d945 252 Gene3D G3DSA:3.40.190.10 122 202 2.8E-32 T 28-03-2018 AL504_RS27075 9072511b3643beb3391b68d1adb4d945 252 Pfam PF13531 Bacterial extracellular solute-binding protein 27 250 6.2E-52 T 28-03-2018 AL504_RS27075 9072511b3643beb3391b68d1adb4d945 252 PIRSF PIRSF004846 2 252 4.7E-76 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AL504_RS27075 9072511b3643beb3391b68d1adb4d945 252 SUPERFAMILY SSF53850 26 251 3.93E-67 T 28-03-2018 AL504_RS09920 6fd2895bfaefe8228e2e7dddb89f4146 299 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 9.2E-52 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AL504_RS09920 6fd2895bfaefe8228e2e7dddb89f4146 299 SUPERFAMILY SSF51197 101 225 1.04E-18 T 28-03-2018 AL504_RS09920 6fd2895bfaefe8228e2e7dddb89f4146 299 Gene3D G3DSA:2.60.120.330 60 244 9.7E-48 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SMART SM00851 957 1044 1.1E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1054 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 2.7E-42 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SUPERFAMILY SSF56059 675 935 2.3E-103 T 28-03-2018 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Gene3D G3DSA:3.30.470.20 119 410 1.5E-66 T 28-03-2018 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 3.8E-66 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 3.8E-66 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 3.8E-66 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 3.8E-66 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.8E-66 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 3.8E-66 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.8E-66 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 711 725 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Pfam PF02142 MGS-like domain 958 1043 3.5E-19 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SUPERFAMILY SSF56059 128 408 1.75E-106 T 28-03-2018 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 840 847 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Gene3D G3DSA:3.40.50.1380 929 1057 2.4E-39 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Gene3D G3DSA:3.40.50.20 541 656 2.1E-61 T 28-03-2018 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SUPERFAMILY SSF52335 937 1076 8.24E-39 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.432 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Gene3D G3DSA:3.30.1490.20 657 745 4.8E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Gene3D G3DSA:3.30.470.20 746 928 2.0E-44 T 28-03-2018 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Gene3D G3DSA:3.40.50.20 4 117 2.5E-37 T 28-03-2018 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SUPERFAMILY SSF48108 403 556 2.35E-54 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SUPERFAMILY SSF52440 558 677 4.32E-49 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 1.2E-69 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 675 876 2.9E-36 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Gene3D G3DSA:1.10.1030.10 411 540 3.7E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SMART SM01096 426 549 4.4E-75 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 SUPERFAMILY SSF52440 1 127 2.01E-48 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS26385 9912eae5c13aff16165eb6e84fe8f497 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1065 13.216 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 PRINTS PR00315 GTP-binding elongation factor signature 54 64 3.0E-5 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 PRINTS PR00315 GTP-binding elongation factor signature 2 15 3.0E-5 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 PRINTS PR00315 GTP-binding elongation factor signature 70 81 3.0E-5 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Pfam PF09106 Elongation factor SelB, winged helix 449 503 1.3E-15 T 28-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 SUPERFAMILY SSF50465 270 365 1.87E-17 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Gene3D G3DSA:1.10.10.10 574 632 5.4E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Pfam PF09107 Elongation factor SelB, winged helix 589 631 2.0E-17 T 28-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 SUPERFAMILY SSF46785 580 633 4.35E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 SUPERFAMILY SSF46785 438 507 1.01E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Gene3D G3DSA:2.40.30.10 176 265 1.1E-20 T 28-03-2018 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Gene3D G3DSA:1.10.10.10 512 571 4.9E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 SUPERFAMILY SSF46785 513 573 2.72E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 SUPERFAMILY SSF52540 2 194 9.14E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Gene3D G3DSA:2.40.30.10 272 353 5.8E-15 T 28-03-2018 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Pfam PF00009 Elongation factor Tu GTP binding domain 2 130 1.6E-26 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Gene3D G3DSA:1.10.10.10 439 503 7.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 SUPERFAMILY SSF50447 174 264 1.25E-16 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 Gene3D G3DSA:3.40.50.300 1 170 1.8E-26 T 28-03-2018 AL504_RS17205 451c48c09b4baaa9f95e2af79cc676ca 645 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 632 1.6E-130 T 28-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AL504_RS06910 9390e9cc9c983a557b7f3d4676c48f7e 410 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 6 44 1.3E-18 T 28-03-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 AL504_RS06910 9390e9cc9c983a557b7f3d4676c48f7e 410 Pfam PF00676 Dehydrogenase E1 component 81 377 1.8E-101 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AL504_RS06910 9390e9cc9c983a557b7f3d4676c48f7e 410 SUPERFAMILY SSF52518 46 407 7.94E-94 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS06910 9390e9cc9c983a557b7f3d4676c48f7e 410 Gene3D G3DSA:3.40.50.970 2 408 3.9E-87 T 28-03-2018 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 Gene3D G3DSA:3.40.190.10 90 177 1.4E-25 T 28-03-2018 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 Pfam PF03466 LysR substrate binding domain 89 287 3.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 SUPERFAMILY SSF53850 90 294 3.14E-35 T 28-03-2018 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 SUPERFAMILY SSF46785 4 88 9.58E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 Gene3D G3DSA:3.40.190.10 178 269 3.1E-22 T 28-03-2018 AL504_RS14130 2e19f0f84160acd5ca982e85173c0f66 296 Gene3D G3DSA:1.10.10.10 1 87 3.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19130 b271de7ca91fadfe455271c41db27f84 387 SUPERFAMILY SSF51905 10 221 2.69E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19130 b271de7ca91fadfe455271c41db27f84 387 SUPERFAMILY SSF51905 314 373 2.69E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19130 b271de7ca91fadfe455271c41db27f84 387 Gene3D G3DSA:3.50.50.60 2 386 5.9E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19130 b271de7ca91fadfe455271c41db27f84 387 Pfam PF01266 FAD dependent oxidoreductase 10 353 7.9E-61 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS11145 d86b5434419d5692b134261b1ce61a2e 325 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 12 290 8.5E-101 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL504_RS11145 d86b5434419d5692b134261b1ce61a2e 325 Pfam PF02401 LytB protein 12 288 5.5E-93 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL504_RS11145 d86b5434419d5692b134261b1ce61a2e 325 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 10 292 38.063 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL504_RS14225 a6cef5ca56754c4ddef0ff019956e903 232 Gene3D G3DSA:1.20.1440.100 19 84 2.0E-23 T 28-03-2018 AL504_RS14225 a6cef5ca56754c4ddef0ff019956e903 232 Gene3D G3DSA:3.40.50.1000 85 226 1.9E-12 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14225 a6cef5ca56754c4ddef0ff019956e903 232 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 207 3.5E-35 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL504_RS14225 a6cef5ca56754c4ddef0ff019956e903 232 SUPERFAMILY SSF56784 4 226 1.6E-33 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14225 a6cef5ca56754c4ddef0ff019956e903 232 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 197 7.1E-23 T 28-03-2018 AL504_RS14225 a6cef5ca56754c4ddef0ff019956e903 232 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 195 9.5E-41 T 28-03-2018 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 2.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 2.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 2.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 Gene3D G3DSA:3.40.190.10 102 190 9.9E-10 T 28-03-2018 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 Gene3D G3DSA:1.10.10.10 1 100 2.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 7.7E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 Pfam PF03466 LysR substrate binding domain 103 307 4.9E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 SUPERFAMILY SSF53850 103 312 4.81E-32 T 28-03-2018 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 Gene3D G3DSA:3.40.190.10 191 279 4.2E-14 T 28-03-2018 AL504_RS00435 992a315d2cdb849690c82b42a05c8cad 326 SUPERFAMILY SSF46785 11 109 4.24E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29595 8bc91b162cc25096b871ac3a7179cffc 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 430 1.0E-84 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS29595 8bc91b162cc25096b871ac3a7179cffc 525 Gene3D G3DSA:3.10.105.10 287 494 2.6E-44 T 28-03-2018 AL504_RS29595 8bc91b162cc25096b871ac3a7179cffc 525 SUPERFAMILY SSF53850 27 513 3.98E-112 T 28-03-2018 AL504_RS29595 8bc91b162cc25096b871ac3a7179cffc 525 Gene3D G3DSA:3.40.190.10 185 286 3.7E-21 T 28-03-2018 AL504_RS29595 8bc91b162cc25096b871ac3a7179cffc 525 Gene3D G3DSA:3.90.76.10 39 184 7.8E-34 T 28-03-2018 AL504_RS29595 8bc91b162cc25096b871ac3a7179cffc 525 PIRSF PIRSF002741 3 517 2.8E-85 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS13600 b55e5a8d202b267277890b20589fc8f6 270 SMART SM00852 11 184 1.2E-27 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS13600 b55e5a8d202b267277890b20589fc8f6 270 Pfam PF00994 Probable molybdopterin binding domain 12 177 7.9E-24 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS13600 b55e5a8d202b267277890b20589fc8f6 270 SUPERFAMILY SSF53218 9 218 2.22E-33 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS13600 b55e5a8d202b267277890b20589fc8f6 270 Gene3D G3DSA:3.40.980.10 5 184 2.2E-39 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS16525 158ae34acf372d5396720d2cfdc6dfea 334 PIRSF PIRSF018266 13 334 2.0E-84 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS16525 158ae34acf372d5396720d2cfdc6dfea 334 Pfam PF04773 FecR protein 129 222 4.1E-20 T 28-03-2018 IPR006860 FecR protein AL504_RS16525 158ae34acf372d5396720d2cfdc6dfea 334 Pfam PF16220 Domain of unknown function (DUF4880) 23 63 3.4E-11 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 SUPERFAMILY SSF53474 16 403 1.32E-94 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 Pfam PF06441 Epoxide hydrolase N terminus 22 126 6.8E-34 T 28-03-2018 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 Gene3D G3DSA:3.40.50.1820 14 413 4.1E-72 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 PRINTS PR00412 Epoxide hydrolase signature 146 161 9.2E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 PRINTS PR00412 Epoxide hydrolase signature 192 205 9.2E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 PRINTS PR00412 Epoxide hydrolase signature 380 402 9.2E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 PRINTS PR00412 Epoxide hydrolase signature 117 135 9.2E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS29245 aeb86603a4daa4039c64508b450b1655 413 PIRSF PIRSF001112 13 409 2.2E-126 T 28-03-2018 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 SUPERFAMILY SSF54752 277 335 1.23E-21 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 12 333 1.1E-172 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 SUPERFAMILY SSF52540 12 276 3.88E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 PRINTS PR00142 RecA protein signature 219 247 5.0E-84 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 PRINTS PR00142 RecA protein signature 306 323 5.0E-84 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 PRINTS PR00142 RecA protein signature 252 281 5.0E-84 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 PRINTS PR00142 RecA protein signature 102 131 5.0E-84 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 PRINTS PR00142 RecA protein signature 174 203 5.0E-84 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 PRINTS PR00142 RecA protein signature 136 165 5.0E-84 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 ProSitePatterns PS00321 recA signature. 222 230 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 Gene3D G3DSA:3.40.50.300 34 277 8.5E-47 T 28-03-2018 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 Pfam PF00154 recA bacterial DNA recombination protein 15 277 5.4E-145 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 Hamap MF_00268 Protein RecA [recA]. 13 338 51.734 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 Gene3D G3DSA:3.30.250.10 278 334 4.9E-26 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL504_RS10725 563f7d8d930d99645f9b6f9fb14bbbe1 354 SMART SM00382 66 237 3.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07705 20e7cc7edb84674a98510343ce2b1978 413 Gene3D G3DSA:3.50.50.60 3 357 5.6E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07705 20e7cc7edb84674a98510343ce2b1978 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 7.5E-5 T 28-03-2018 AL504_RS07705 20e7cc7edb84674a98510343ce2b1978 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 7.5E-5 T 28-03-2018 AL504_RS07705 20e7cc7edb84674a98510343ce2b1978 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 7.5E-5 T 28-03-2018 AL504_RS07705 20e7cc7edb84674a98510343ce2b1978 413 SUPERFAMILY SSF51905 2 159 2.37E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07705 20e7cc7edb84674a98510343ce2b1978 413 SUPERFAMILY SSF51905 281 356 2.37E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 SUPERFAMILY SSF48498 96 203 8.9E-15 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 Gene3D G3DSA:1.10.10.60 2 71 9.0E-18 T 28-03-2018 AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 Gene3D G3DSA:1.10.357.10 72 209 2.6E-17 T 28-03-2018 AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 SUPERFAMILY SSF46689 23 99 4.37E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 40 71 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 3.9E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 3.9E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS31345 06816a668378e46ff35bfe8ab1df182e 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 74 1.1E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 Gene3D G3DSA:3.30.565.10 215 373 5.7E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 SUPERFAMILY SSF52172 12 149 2.28E-31 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 SMART SM00388 154 219 1.7E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 371 2.2E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 Gene3D G3DSA:1.10.287.130 149 214 1.6E-12 T 28-03-2018 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 Pfam PF00072 Response regulator receiver domain 16 127 4.0E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 SUPERFAMILY SSF47384 139 217 2.94E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 SMART SM00448 13 128 1.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 SMART SM00387 263 373 3.4E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 218 1.4E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 Gene3D G3DSA:3.40.50.2300 9 148 4.2E-31 T 28-03-2018 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 SUPERFAMILY SSF55874 209 371 1.1E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 2.6E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 328 2.6E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23815 36f7219930b9233c8647281b93f4c008 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 2.6E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23425 9a8cfe56fbcea505700da47b3b73729c 176 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 26.382 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS23425 9a8cfe56fbcea505700da47b3b73729c 176 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 147 6.1E-37 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS23425 9a8cfe56fbcea505700da47b3b73729c 176 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 148 1.3E-47 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS23425 9a8cfe56fbcea505700da47b3b73729c 176 SUPERFAMILY SSF52121 7 151 1.96E-49 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS23425 9a8cfe56fbcea505700da47b3b73729c 176 Gene3D G3DSA:3.40.50.960 7 152 2.0E-51 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 SUPERFAMILY SSF51556 65 377 2.52E-97 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 Gene3D G3DSA:2.30.40.10 11 79 1.3E-16 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 ProSitePatterns PS00483 Dihydroorotase signature 2. 312 323 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 Pfam PF01979 Amidohydrolase family 62 430 1.5E-21 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 Gene3D G3DSA:3.20.20.140 80 396 8.6E-95 T 28-03-2018 AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 SUPERFAMILY SSF51338 12 64 1.95E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 SUPERFAMILY SSF51338 376 447 1.95E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS28060 2e509f0fdaf9b8e94c0d610961d688cd 460 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 30 433 3.5E-88 T 28-03-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS14135 70d4a781f9003f3c82fdd6dce0502dc4 569 Gene3D G3DSA:1.20.140.10 294 466 7.1E-37 T 28-03-2018 AL504_RS14135 70d4a781f9003f3c82fdd6dce0502dc4 569 Gene3D G3DSA:2.40.110.10 186 293 3.0E-28 T 28-03-2018 AL504_RS14135 70d4a781f9003f3c82fdd6dce0502dc4 569 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 410 429 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS14135 70d4a781f9003f3c82fdd6dce0502dc4 569 SUPERFAMILY SSF56645 103 305 7.72E-43 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS14135 70d4a781f9003f3c82fdd6dce0502dc4 569 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 296 451 2.5E-33 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14135 70d4a781f9003f3c82fdd6dce0502dc4 569 SUPERFAMILY SSF47203 294 453 2.74E-40 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14135 70d4a781f9003f3c82fdd6dce0502dc4 569 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 187 285 2.7E-17 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS27675 dac8f77989789ed21a6853ae6cd2ad26 407 SUPERFAMILY SSF52402 3 241 8.38E-39 T 28-03-2018 AL504_RS27675 dac8f77989789ed21a6853ae6cd2ad26 407 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 159 241 1.8E-7 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL504_RS27675 dac8f77989789ed21a6853ae6cd2ad26 407 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 84 4.8E-7 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL504_RS27675 dac8f77989789ed21a6853ae6cd2ad26 407 Gene3D G3DSA:3.40.50.620 9 241 9.3E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS27675 dac8f77989789ed21a6853ae6cd2ad26 407 Pfam PF11922 Domain of unknown function (DUF3440) 245 350 8.9E-29 T 28-03-2018 IPR021845 Protein of unknown function DUF3440 AL504_RS04800 b7ee13b94171f04e1bd3caf313b84a96 304 SUPERFAMILY SSF53850 95 293 1.18E-22 T 28-03-2018 AL504_RS04800 b7ee13b94171f04e1bd3caf313b84a96 304 Pfam PF03466 LysR substrate binding domain 94 291 1.6E-18 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04800 b7ee13b94171f04e1bd3caf313b84a96 304 Gene3D G3DSA:3.40.190.10 92 183 2.7E-10 T 28-03-2018 AL504_RS04800 b7ee13b94171f04e1bd3caf313b84a96 304 Gene3D G3DSA:3.40.190.10 184 263 1.0E-6 T 28-03-2018 AL504_RS04800 b7ee13b94171f04e1bd3caf313b84a96 304 Gene3D G3DSA:1.10.10.10 1 86 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04800 b7ee13b94171f04e1bd3caf313b84a96 304 SUPERFAMILY SSF46785 4 107 8.16E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04800 b7ee13b94171f04e1bd3caf313b84a96 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.7E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 SUPERFAMILY SSF51735 156 268 1.4E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 SUPERFAMILY SSF51735 297 362 1.4E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 Gene3D G3DSA:3.40.50.10730 181 272 4.8E-23 T 28-03-2018 AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 Pfam PF00107 Zinc-binding dehydrogenase 189 258 1.4E-11 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 Gene3D G3DSA:3.90.180.10 1 180 3.4E-50 T 28-03-2018 AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 138 1.1E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 6.7E-7 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 SUPERFAMILY SSF50129 1 195 3.35E-57 T 28-03-2018 IPR011032 GroES-like AL504_RS29135 982d7deefa4408a6d2134262c464ad9d 402 SMART SM00829 7 364 0.0029 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS27290 f83590eb26b843f5e9880a09136187d2 194 SUPERFAMILY SSF51182 78 187 1.97E-27 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS27290 f83590eb26b843f5e9880a09136187d2 194 Gene3D G3DSA:2.60.120.10 72 194 2.6E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS27290 f83590eb26b843f5e9880a09136187d2 194 SMART SM00530 12 67 1.9E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS27290 f83590eb26b843f5e9880a09136187d2 194 Pfam PF07883 Cupin domain 128 185 8.7E-13 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS27290 f83590eb26b843f5e9880a09136187d2 194 Gene3D G3DSA:1.10.260.40 2 71 2.4E-18 T 28-03-2018 AL504_RS27290 f83590eb26b843f5e9880a09136187d2 194 SUPERFAMILY SSF47413 8 72 1.18E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS27290 f83590eb26b843f5e9880a09136187d2 194 Pfam PF13560 Helix-turn-helix domain 9 67 3.8E-15 T 28-03-2018 AL504_RS29210 2b8c7a7b3c43fcf4747c3e5b91443290 425 SUPERFAMILY SSF54966 4 135 3.27E-34 T 28-03-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 AL504_RS29210 2b8c7a7b3c43fcf4747c3e5b91443290 425 Gene3D G3DSA:3.30.70.150 1 135 2.6E-37 T 28-03-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 AL504_RS29210 2b8c7a7b3c43fcf4747c3e5b91443290 425 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 16 131 8.2E-6 T 28-03-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 AL504_RS29210 2b8c7a7b3c43fcf4747c3e5b91443290 425 SUPERFAMILY SSF51649 135 423 1.83E-87 T 28-03-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 AL504_RS29210 2b8c7a7b3c43fcf4747c3e5b91443290 425 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 141 421 3.2E-77 T 28-03-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 AL504_RS29210 2b8c7a7b3c43fcf4747c3e5b91443290 425 Gene3D G3DSA:3.20.20.110 137 424 2.3E-97 T 28-03-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 AL504_RS29210 2b8c7a7b3c43fcf4747c3e5b91443290 425 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 183 191 - T 28-03-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 AL504_RS03605 845b2e730ec0251506199659a73a6655 251 SMART SM00382 36 223 8.7E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03605 845b2e730ec0251506199659a73a6655 251 Pfam PF00005 ABC transporter 27 175 4.5E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03605 845b2e730ec0251506199659a73a6655 251 SUPERFAMILY SSF52540 12 245 2.35E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03605 845b2e730ec0251506199659a73a6655 251 PIRSF PIRSF039085 8 251 6.2E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS03605 845b2e730ec0251506199659a73a6655 251 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03605 845b2e730ec0251506199659a73a6655 251 Gene3D G3DSA:3.40.50.300 8 250 1.9E-73 T 28-03-2018 AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 SMART SM00387 287 377 0.0059 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 Pfam PF07730 Histidine kinase 181 246 7.1E-14 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 SUPERFAMILY SSF55785 27 143 4.01E-23 T 28-03-2018 IPR000014 PAS domain AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 SUPERFAMILY SSF55874 248 375 3.93E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 SMART SM00091 16 82 1.4E-10 T 28-03-2018 IPR000014 PAS domain AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 Pfam PF13426 PAS domain 27 134 2.5E-13 T 28-03-2018 IPR000014 PAS domain AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 Gene3D G3DSA:3.30.450.20 11 186 1.9E-31 T 28-03-2018 AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 142 7.5E-20 T 28-03-2018 IPR000014 PAS domain AL504_RS29415 db334d59aeb5badcfce27e3fb5ada89b 380 Gene3D G3DSA:3.30.565.10 245 380 4.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19435 58457a867ebbb58bb7e32d920bd2b1cc 156 Gene3D G3DSA:3.40.630.30 1 156 2.5E-25 T 28-03-2018 AL504_RS19435 58457a867ebbb58bb7e32d920bd2b1cc 156 Pfam PF00583 Acetyltransferase (GNAT) family 77 135 6.4E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS19435 58457a867ebbb58bb7e32d920bd2b1cc 156 SUPERFAMILY SSF55729 11 153 2.23E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS02940 008bd3a11f7afd5b6f01784f0c3c8293 308 Pfam PF03466 LysR substrate binding domain 96 303 1.5E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS02940 008bd3a11f7afd5b6f01784f0c3c8293 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.8E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02940 008bd3a11f7afd5b6f01784f0c3c8293 308 Gene3D G3DSA:3.40.190.10 183 273 1.9E-15 T 28-03-2018 AL504_RS02940 008bd3a11f7afd5b6f01784f0c3c8293 308 Gene3D G3DSA:1.10.10.10 1 87 9.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02940 008bd3a11f7afd5b6f01784f0c3c8293 308 SUPERFAMILY SSF53850 90 301 1.68E-38 T 28-03-2018 AL504_RS02940 008bd3a11f7afd5b6f01784f0c3c8293 308 Gene3D G3DSA:3.40.190.10 96 182 2.6E-16 T 28-03-2018 AL504_RS02940 008bd3a11f7afd5b6f01784f0c3c8293 308 SUPERFAMILY SSF46785 2 85 8.89E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13255 6e16b3c9e889637dc8d05ef39e44e6ed 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 330 8.8E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13255 6e16b3c9e889637dc8d05ef39e44e6ed 335 SUPERFAMILY SSF52540 9 264 8.7E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13255 6e16b3c9e889637dc8d05ef39e44e6ed 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 311 8.4E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13255 6e16b3c9e889637dc8d05ef39e44e6ed 335 Pfam PF00005 ABC transporter 30 193 3.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS13255 6e16b3c9e889637dc8d05ef39e44e6ed 335 SMART SM00382 38 243 4.5E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13255 6e16b3c9e889637dc8d05ef39e44e6ed 335 Gene3D G3DSA:3.40.50.300 7 334 7.5E-73 T 28-03-2018 AL504_RS13255 6e16b3c9e889637dc8d05ef39e44e6ed 335 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 Gene3D G3DSA:3.40.50.1370 231 400 2.6E-49 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 134 141 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 153 6.2E-19 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 363 386 6.2E-19 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 218 229 6.2E-19 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 348 357 6.2E-19 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00101 Aspartate carbamoyltransferase signature 313 322 3.9E-29 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00101 Aspartate carbamoyltransferase signature 217 234 3.9E-29 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00101 Aspartate carbamoyltransferase signature 124 146 3.9E-29 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 172 3.9E-29 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 PRINTS PR00101 Aspartate carbamoyltransferase signature 379 393 3.9E-29 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 Gene3D G3DSA:1.10.260.40 6 59 0.003 T 28-03-2018 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 SUPERFAMILY SSF53671 89 399 4.32E-89 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 90 398 1.0E-89 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 242 396 3.6E-29 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 Gene3D G3DSA:3.40.50.1370 80 230 5.0E-49 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10760 bc6134eff71506f56e6c9a1278cf1894 430 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 90 229 9.0E-42 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL504_RS25065 a937c05f8880baf7be75554ee9c6e8a3 253 Gene3D G3DSA:3.40.50.300 1 251 4.8E-65 T 28-03-2018 AL504_RS25065 a937c05f8880baf7be75554ee9c6e8a3 253 PIRSF PIRSF039085 1 247 1.4E-94 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS25065 a937c05f8880baf7be75554ee9c6e8a3 253 Pfam PF00005 ABC transporter 17 171 1.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS25065 a937c05f8880baf7be75554ee9c6e8a3 253 SMART SM00382 26 219 3.0E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS25065 a937c05f8880baf7be75554ee9c6e8a3 253 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS25065 a937c05f8880baf7be75554ee9c6e8a3 253 SUPERFAMILY SSF52540 1 241 1.2E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27315 7b1f4779954fd5abafde81deaaab6f9f 314 Gene3D G3DSA:3.40.50.1820 6 310 3.4E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27315 7b1f4779954fd5abafde81deaaab6f9f 314 SUPERFAMILY SSF53474 233 309 5.75E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27315 7b1f4779954fd5abafde81deaaab6f9f 314 SUPERFAMILY SSF53474 24 175 5.75E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27315 7b1f4779954fd5abafde81deaaab6f9f 314 Pfam PF12146 Serine aminopeptidase, S33 115 288 4.5E-7 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS26340 f523e4d8f352ce55c5eb2ca4b7e133d1 270 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS26340 f523e4d8f352ce55c5eb2ca4b7e133d1 270 Gene3D G3DSA:3.40.50.300 1 225 1.0E-57 T 28-03-2018 AL504_RS26340 f523e4d8f352ce55c5eb2ca4b7e133d1 270 Pfam PF00005 ABC transporter 29 167 1.5E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26340 f523e4d8f352ce55c5eb2ca4b7e133d1 270 SUPERFAMILY SSF52540 7 220 1.33E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26340 f523e4d8f352ce55c5eb2ca4b7e133d1 270 SMART SM00382 37 217 2.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26690 dd7c99cd33f4e91acf1321268de6ae5a 119 PIRSF PIRSF029826 1 115 3.8E-43 T 28-03-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 AL504_RS26690 dd7c99cd33f4e91acf1321268de6ae5a 119 SUPERFAMILY SSF101386 3 116 3.11E-34 T 28-03-2018 AL504_RS26690 dd7c99cd33f4e91acf1321268de6ae5a 119 Pfam PF12643 MazG-like family 33 114 3.0E-14 T 28-03-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 AL504_RS26690 dd7c99cd33f4e91acf1321268de6ae5a 119 Gene3D G3DSA:1.10.287.1080 1 117 4.5E-21 T 28-03-2018 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 PIRSF PIRSF036684 1 762 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 1.1E-25 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 Gene3D G3DSA:3.40.50.10380 5 160 2.5E-34 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 755 1.6E-94 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 SUPERFAMILY SSF53223 11 161 1.22E-50 T 28-03-2018 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 Gene3D G3DSA:3.40.718.10 451 750 9.0E-52 T 28-03-2018 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 SUPERFAMILY SSF53659 429 758 5.35E-86 T 28-03-2018 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 4.5E-20 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 SUPERFAMILY SSF51735 163 438 7.75E-84 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 SMART SM01274 18 151 4.1E-76 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 Gene3D G3DSA:3.40.50.720 161 450 4.4E-81 T 28-03-2018 AL504_RS25740 bd25bd41d15be189621dcdf940ae6ba9 762 SMART SM00919 163 400 7.1E-135 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL504_RS19570 8932e1f2f2633251529c7e441bfa3db5 463 Gene3D G3DSA:3.40.309.10 249 443 1.6E-61 T 28-03-2018 AL504_RS19570 8932e1f2f2633251529c7e441bfa3db5 463 Gene3D G3DSA:3.40.605.10 2 248 2.4E-72 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS19570 8932e1f2f2633251529c7e441bfa3db5 463 Pfam PF00171 Aldehyde dehydrogenase family 5 456 1.2E-128 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS19570 8932e1f2f2633251529c7e441bfa3db5 463 SUPERFAMILY SSF53720 6 460 9.56E-132 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS19570 8932e1f2f2633251529c7e441bfa3db5 463 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 230 237 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 Pfam PF12833 Helix-turn-helix domain 227 304 1.0E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 258 299 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 SUPERFAMILY SSF46689 205 253 6.57E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 SUPERFAMILY SSF46689 257 305 3.49E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 303 5.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 287 5.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 Gene3D G3DSA:1.10.10.60 260 306 2.2E-12 T 28-03-2018 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 Gene3D G3DSA:2.60.120.280 19 190 2.0E-11 T 28-03-2018 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 SMART SM00342 221 303 3.7E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 Pfam PF12852 Cupin 18 188 7.9E-34 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL504_RS02770 cb66fb4c59e9001b0f58fcf9198db7b3 307 Gene3D G3DSA:1.10.10.60 201 259 1.9E-10 T 28-03-2018 AL504_RS20065 f7f3238c16ee931f765862a4a736cd18 207 SUPERFAMILY SSF52540 7 201 2.01E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20065 f7f3238c16ee931f765862a4a736cd18 207 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 201 25.953 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL504_RS20065 f7f3238c16ee931f765862a4a736cd18 207 Pfam PF01926 50S ribosome-binding GTPase 26 151 7.1E-18 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS20065 f7f3238c16ee931f765862a4a736cd18 207 Gene3D G3DSA:3.40.50.300 3 205 4.5E-27 T 28-03-2018 AL504_RS20065 f7f3238c16ee931f765862a4a736cd18 207 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 197 6.4E-60 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL504_RS00480 b801473506f68504dfddfff89c949769 183 SUPERFAMILY SSF46557 28 102 9.02E-27 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL504_RS00480 b801473506f68504dfddfff89c949769 183 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 145 161 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL504_RS00480 b801473506f68504dfddfff89c949769 183 Gene3D G3DSA:3.10.50.30 101 183 1.8E-24 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL504_RS00480 b801473506f68504dfddfff89c949769 183 Gene3D G3DSA:1.10.287.180 28 100 1.3E-27 T 28-03-2018 AL504_RS00480 b801473506f68504dfddfff89c949769 183 Hamap MF_00105 Transcription elongation factor GreA [greA]. 27 180 26.91 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL504_RS00480 b801473506f68504dfddfff89c949769 183 SUPERFAMILY SSF54534 106 181 1.22E-19 T 28-03-2018 AL504_RS00480 b801473506f68504dfddfff89c949769 183 Hamap MF_00930 Transcription elongation factor GreB [greB]. 26 182 51.269 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL504_RS00480 b801473506f68504dfddfff89c949769 183 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 42 73 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL504_RS00480 b801473506f68504dfddfff89c949769 183 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 27 182 3.3E-64 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL504_RS00480 b801473506f68504dfddfff89c949769 183 PIRSF PIRSF006092 25 183 5.9E-43 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL504_RS00480 b801473506f68504dfddfff89c949769 183 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 108 181 1.6E-23 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL504_RS00480 b801473506f68504dfddfff89c949769 183 Pfam PF03449 Transcription elongation factor, N-terminal 29 99 1.9E-24 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 194 206 2.2E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 2.2E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 158 169 2.2E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 55 66 2.2E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 2.2E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 Gene3D G3DSA:2.40.160.10 9 371 9.9E-72 T 28-03-2018 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00184 Neisseria sp. porin signature 57 82 2.8E-8 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00184 Neisseria sp. porin signature 325 349 2.8E-8 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 PRINTS PR00184 Neisseria sp. porin signature 157 174 2.8E-8 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 SUPERFAMILY SSF56935 21 371 2.2E-75 T 28-03-2018 AL504_RS16735 fa746083a8df511eaba24d5f4b1f4d4f 371 Pfam PF13609 Gram-negative porin 8 348 1.3E-57 T 28-03-2018 AL504_RS01580 d86933401fc5befe190ee36465146d25 372 Gene3D G3DSA:2.40.160.10 8 372 4.7E-68 T 28-03-2018 AL504_RS01580 d86933401fc5befe190ee36465146d25 372 PRINTS PR00184 Neisseria sp. porin signature 312 336 6.0E-6 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS01580 d86933401fc5befe190ee36465146d25 372 PRINTS PR00184 Neisseria sp. porin signature 62 87 6.0E-6 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS01580 d86933401fc5befe190ee36465146d25 372 SUPERFAMILY SSF56935 30 372 2.01E-76 T 28-03-2018 AL504_RS01580 d86933401fc5befe190ee36465146d25 372 Pfam PF13609 Gram-negative porin 22 340 4.1E-49 T 28-03-2018 AL504_RS04900 ce2b2ef68a2a3a146570641eed2a6481 310 Gene3D G3DSA:1.10.760.10 150 257 1.5E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04900 ce2b2ef68a2a3a146570641eed2a6481 310 SUPERFAMILY SSF46626 47 154 2.67E-29 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04900 ce2b2ef68a2a3a146570641eed2a6481 310 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 174 254 1.7E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04900 ce2b2ef68a2a3a146570641eed2a6481 310 Gene3D G3DSA:1.10.760.10 52 149 1.3E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04900 ce2b2ef68a2a3a146570641eed2a6481 310 SUPERFAMILY SSF46626 159 266 1.3E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS12280 0b93f1e6e45d64e3a3d8ae094615e04f 391 SUPERFAMILY SSF51690 117 387 6.08E-88 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL504_RS12280 0b93f1e6e45d64e3a3d8ae094615e04f 391 PIRSF PIRSF000484 1 376 1.6E-68 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL504_RS12280 0b93f1e6e45d64e3a3d8ae094615e04f 391 SUPERFAMILY SSF54675 1 136 1.71E-43 T 28-03-2018 AL504_RS12280 0b93f1e6e45d64e3a3d8ae094615e04f 391 Gene3D G3DSA:3.20.140.10 1 391 3.2E-98 T 28-03-2018 AL504_RS12280 0b93f1e6e45d64e3a3d8ae094615e04f 391 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 390 45.865 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL504_RS12280 0b93f1e6e45d64e3a3d8ae094615e04f 391 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 389 6.1E-147 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL504_RS12280 0b93f1e6e45d64e3a3d8ae094615e04f 391 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 163 388 1.1E-70 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL504_RS26420 57c75a7d288bb5bf23b9e9e6bee5d3c8 441 SUPERFAMILY SSF53850 22 312 5.43E-47 T 28-03-2018 AL504_RS26420 57c75a7d288bb5bf23b9e9e6bee5d3c8 441 Gene3D G3DSA:3.40.190.10 141 286 5.3E-22 T 28-03-2018 AL504_RS26420 57c75a7d288bb5bf23b9e9e6bee5d3c8 441 Gene3D G3DSA:3.40.190.10 14 140 5.2E-11 T 28-03-2018 AL504_RS26420 57c75a7d288bb5bf23b9e9e6bee5d3c8 441 Pfam PF13343 Bacterial extracellular solute-binding protein 75 283 3.4E-21 T 28-03-2018 AL504_RS12025 aa882cf712a489b52c2ed716a3b7e802 497 SUPERFAMILY SSF53720 4 483 5.76E-144 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS12025 aa882cf712a489b52c2ed716a3b7e802 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS12025 aa882cf712a489b52c2ed716a3b7e802 497 Gene3D G3DSA:3.40.605.10 1 265 4.8E-85 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS12025 aa882cf712a489b52c2ed716a3b7e802 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 483 3.6E-211 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AL504_RS12025 aa882cf712a489b52c2ed716a3b7e802 497 Pfam PF00171 Aldehyde dehydrogenase family 18 479 4.6E-136 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS12025 aa882cf712a489b52c2ed716a3b7e802 497 Gene3D G3DSA:3.40.309.10 266 461 5.2E-61 T 28-03-2018 AL504_RS15860 f0465f2b2c22e464a150a2d4b10aebc6 244 Pfam PF00912 Transglycosylase 70 238 1.9E-52 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS15860 f0465f2b2c22e464a150a2d4b10aebc6 244 SUPERFAMILY SSF53955 68 240 9.28E-57 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS15860 f0465f2b2c22e464a150a2d4b10aebc6 244 Gene3D G3DSA:1.10.3810.10 51 243 7.9E-58 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS15860 f0465f2b2c22e464a150a2d4b10aebc6 244 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 22 243 7.3E-86 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AL504_RS15860 f0465f2b2c22e464a150a2d4b10aebc6 244 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 16 244 40.428 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AL504_RS14605 65eed9e4af5fc489997c360ed4288390 265 PIRSF PIRSF002854 1 265 7.6E-107 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS14605 65eed9e4af5fc489997c360ed4288390 265 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 27 265 1.7E-77 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS14605 65eed9e4af5fc489997c360ed4288390 265 Gene3D G3DSA:3.40.190.10 29 123 5.6E-24 T 28-03-2018 AL504_RS14605 65eed9e4af5fc489997c360ed4288390 265 Gene3D G3DSA:3.40.190.10 124 265 7.7E-55 T 28-03-2018 AL504_RS14605 65eed9e4af5fc489997c360ed4288390 265 Pfam PF03180 NLPA lipoprotein 30 265 1.4E-97 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS14605 65eed9e4af5fc489997c360ed4288390 265 SUPERFAMILY SSF53850 30 265 5.38E-92 T 28-03-2018 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 Pfam PF07478 D-ala D-ala ligase C-terminus 107 302 7.6E-56 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 305 4.9E-97 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 Gene3D G3DSA:3.40.50.20 1 100 2.2E-34 T 28-03-2018 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 PIRSF PIRSF039102 44 314 1.3E-85 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 PIRSF PIRSF039102 3 50 1.2E-7 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 Gene3D G3DSA:3.30.1490.20 101 168 4.8E-16 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 306 35.832 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 Pfam PF01820 D-ala D-ala ligase N-terminus 7 89 1.9E-18 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 Gene3D G3DSA:3.30.470.20 169 315 2.1E-44 T 28-03-2018 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 SUPERFAMILY SSF52440 7 99 7.19E-30 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 SUPERFAMILY SSF56059 99 308 3.2E-59 T 28-03-2018 AL504_RS14745 1496cb3ef90853c1e1d62cb2af0cec6e 316 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 Pfam PF01037 Lrp/AsnC ligand binding domain 77 149 1.2E-14 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 SMART SM00344 11 120 3.6E-33 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 3.8E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 3.8E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 3.8E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 SUPERFAMILY SSF46785 9 95 6.23E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 Gene3D G3DSA:1.10.10.10 12 61 9.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 SUPERFAMILY SSF54909 73 159 9.52E-13 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 1.3E-17 T 28-03-2018 AL504_RS17725 4154e02f01c7c7a48b9da82a847c4ee8 163 Gene3D G3DSA:3.30.70.920 62 159 3.4E-18 T 28-03-2018 AL504_RS21245 f9c8b0f221b6190d8a0c458cfc0e3103 302 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 28-03-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 AL504_RS21245 f9c8b0f221b6190d8a0c458cfc0e3103 302 SUPERFAMILY SSF51569 2 288 1.11E-74 T 28-03-2018 AL504_RS21245 f9c8b0f221b6190d8a0c458cfc0e3103 302 Pfam PF00682 HMGL-like 6 278 5.5E-56 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL504_RS21245 f9c8b0f221b6190d8a0c458cfc0e3103 302 Gene3D G3DSA:3.20.20.70 2 299 4.9E-110 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 PRINTS PR00148 Enolase signature 335 349 7.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 PRINTS PR00148 Enolase signature 37 51 7.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 PRINTS PR00148 Enolase signature 312 323 7.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 PRINTS PR00148 Enolase signature 161 174 7.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 PRINTS PR00148 Enolase signature 107 123 7.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 PRINTS PR00148 Enolase signature 364 381 7.4E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 SUPERFAMILY SSF54826 4 136 1.79E-53 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 SMART SM01192 139 426 9.0E-218 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 Gene3D G3DSA:3.30.390.10 3 127 1.9E-50 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 Pfam PF03952 Enolase, N-terminal domain 4 133 3.9E-56 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 PIRSF PIRSF001400 1 426 2.8E-186 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.0E-204 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 5.7E-130 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 Gene3D G3DSA:3.20.20.120 128 428 1.5E-100 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 ProSitePatterns PS00164 Enolase signature. 335 348 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 Hamap MF_00318 Enolase [eno]. 2 412 44.264 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 SMART SM01193 4 134 6.1E-89 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS11865 d573ce85e1ee8940db53a5df8c5485b5 428 SUPERFAMILY SSF51604 139 427 4.39E-128 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 SUPERFAMILY SSF51206 9 147 5.24E-31 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 SMART SM00100 15 133 6.6E-20 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 SMART SM00419 172 220 2.3E-13 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 Gene3D G3DSA:2.60.120.10 7 148 2.8E-31 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 Pfam PF13545 Crp-like helix-turn-helix domain 153 226 3.3E-18 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 Pfam PF00027 Cyclic nucleotide-binding domain 35 118 2.3E-17 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 Gene3D G3DSA:1.10.10.10 149 227 1.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 SUPERFAMILY SSF46785 151 229 4.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 4.8E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS07820 65ba747f65ffee31bc65f4f6fccb39a4 258 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 4.8E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS13865 af6ee1fcdfa3b89fd182143352c801ea 331 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS13865 af6ee1fcdfa3b89fd182143352c801ea 331 Gene3D G3DSA:3.40.50.300 3 328 1.3E-81 T 28-03-2018 AL504_RS13865 af6ee1fcdfa3b89fd182143352c801ea 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 304 6.4E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13865 af6ee1fcdfa3b89fd182143352c801ea 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 322 2.6E-27 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13865 af6ee1fcdfa3b89fd182143352c801ea 331 SMART SM00382 46 238 1.5E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13865 af6ee1fcdfa3b89fd182143352c801ea 331 Pfam PF00005 ABC transporter 38 189 4.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS13865 af6ee1fcdfa3b89fd182143352c801ea 331 SUPERFAMILY SSF52540 28 260 2.44E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 Pfam PF00005 ABC transporter 324 478 9.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 Pfam PF00005 ABC transporter 28 185 9.0E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 SMART SM00382 36 235 1.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 SMART SM00382 332 527 1.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 267 6.3E-5 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 Gene3D G3DSA:3.40.50.300 294 560 1.0E-70 T 28-03-2018 AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 Gene3D G3DSA:3.40.50.300 4 292 2.6E-66 T 28-03-2018 AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 SUPERFAMILY SSF52540 8 257 5.54E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28565 9dd9fff8110902280ed1a9160c503e83 561 SUPERFAMILY SSF52540 296 548 6.5E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 Gene3D G3DSA:1.10.10.10 2 153 3.0E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 SMART SM00347 33 131 7.7E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.7E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.7E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.7E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.7E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 SUPERFAMILY SSF46785 3 143 3.14E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28330 84aa6722f769263d2d2d8012bf00a33b 171 Pfam PF01047 MarR family 38 96 5.9E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 488 1.1E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 Pfam PF12729 Four helix bundle sensory module for signal transduction 13 190 5.1E-16 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 Gene3D G3DSA:1.10.287.950 218 324 1.3E-13 T 28-03-2018 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 Gene3D G3DSA:1.10.287.950 325 524 7.1E-47 T 28-03-2018 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 Gene3D G3DSA:1.20.120.30 32 192 3.1E-7 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 Pfam PF00672 HAMP domain 220 267 1.0E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 SMART SM00304 220 272 2.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 SUPERFAMILY SSF58104 240 521 2.75E-74 T 28-03-2018 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 477 7.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 294 323 7.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 7.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 398 7.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 14 39 7.9E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS05830 db4566c964fe7d86399cf8268df4845a 529 SMART SM00283 273 520 1.7E-90 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS04780 c10101a497b3397c14fad277645e4f0a 378 SUPERFAMILY SSF103365 4 372 2.35E-101 T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AL504_RS04780 c10101a497b3397c14fad277645e4f0a 378 Pfam PF01139 tRNA-splicing ligase RtcB 126 372 1.7E-56 T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AL504_RS04780 c10101a497b3397c14fad277645e4f0a 378 Pfam PF01139 tRNA-splicing ligase RtcB 29 103 2.4E-10 T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AL504_RS04780 c10101a497b3397c14fad277645e4f0a 378 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 12 367 1.7E-176 T 28-03-2018 IPR017510 Release factor H-coupled RctB family protein AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 SUPERFAMILY SSF53335 5 269 5.03E-54 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 Gene3D G3DSA:3.40.50.150 75 268 3.3E-44 T 28-03-2018 AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 Pfam PF05175 Methyltransferase small domain 102 186 2.0E-13 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 271 45.075 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 176 182 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 Gene3D G3DSA:1.10.8.10 1 74 2.2E-19 T 28-03-2018 AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 19 266 3.1E-89 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL504_RS21645 29b7815ecea3876e607070da54bdfdca 275 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 270 4.6E-71 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 SUPERFAMILY SSF55031 363 476 4.01E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 Gene3D G3DSA:3.40.630.10 364 562 2.0E-23 T 28-03-2018 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 Gene3D G3DSA:3.40.630.10 154 363 3.9E-30 T 28-03-2018 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 Pfam PF01546 Peptidase family M20/M25/M40 229 556 2.8E-25 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 SUPERFAMILY SSF158694 4 144 9.55E-17 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 Gene3D G3DSA:1.10.3330.10 81 147 1.9E-9 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 SUPERFAMILY SSF53187 485 560 2.08E-73 T 28-03-2018 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 SUPERFAMILY SSF53187 153 373 2.08E-73 T 28-03-2018 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 Gene3D G3DSA:1.10.3330.10 3 80 2.5E-11 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 Pfam PF07687 Peptidase dimerisation domain 362 459 1.6E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 Pfam PF09349 OHCU decarboxylase 11 75 2.5E-5 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AL504_RS11710 73955c876f4912d2a2a8c5f19342605f 564 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 160 551 2.8E-102 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AL504_RS03130 53078be44fca25bb41e1d471ead1cb8a 437 SUPERFAMILY SSF103473 19 434 1.83E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS03130 53078be44fca25bb41e1d471ead1cb8a 437 Pfam PF07690 Major Facilitator Superfamily 68 392 1.5E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS03130 53078be44fca25bb41e1d471ead1cb8a 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS03130 53078be44fca25bb41e1d471ead1cb8a 437 Gene3D G3DSA:1.20.1250.20 231 437 1.2E-22 T 28-03-2018 AL504_RS03130 53078be44fca25bb41e1d471ead1cb8a 437 Gene3D G3DSA:1.20.1250.20 14 230 1.2E-21 T 28-03-2018 AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 PIRSF PIRSF001589 1 642 8.3E-160 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 Pfam PF00733 Asparagine synthase 256 627 1.2E-112 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 Gene3D G3DSA:3.40.50.620 230 634 3.1E-78 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 563 1.7E-135 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 Pfam PF13537 Glutamine amidotransferase domain 47 169 2.8E-42 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 SUPERFAMILY SSF56235 1 224 7.03E-59 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 Gene3D G3DSA:3.60.20.10 1 229 9.7E-54 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 SUPERFAMILY SSF52402 483 623 1.05E-90 T 28-03-2018 AL504_RS23120 3f2fd80a6f052d1e4824a55f055aea35 643 SUPERFAMILY SSF52402 248 396 1.05E-90 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 SMART SM00663 235 514 1.7E-172 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Gene3D G3DSA:2.40.50.100 906 1009 1.0E-28 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Gene3D G3DSA:2.40.50.100 1165 1212 2.5E-12 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Gene3D G3DSA:2.40.50.100 1039 1109 1.4E-11 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 SUPERFAMILY SSF64484 1133 1363 0.0 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 SUPERFAMILY SSF64484 16 944 0.0 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.9E-85 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.6E-18 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1365 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Gene3D G3DSA:2.40.50.100 1010 1038 0.46 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 6.7E-25 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Gene3D G3DSA:2.40.50.100 1110 1164 0.033 T 28-03-2018 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 8.6E-77 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Pfam PF00623 RNA polymerase Rpb1, domain 2 395 485 1.8E-26 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.7E-8 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1376 18.788 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19640 e01873d92b62e7cba78d5b0d3c2234ba 1414 Gene3D G3DSA:2.40.40.20 346 488 6.6E-40 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Gene3D G3DSA:3.30.390.30 459 584 1.1E-40 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Gene3D G3DSA:1.10.287.990 158 226 7.0E-21 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Gene3D G3DSA:2.40.50.100 3 65 1.6E-13 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Gene3D G3DSA:3.50.50.60 239 360 2.9E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 435 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 270 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 175 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 463 484 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 550 570 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 127 149 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 399 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 528 543 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 321 4.3E-69 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 126 448 1.1E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 SUPERFAMILY SSF51230 3 95 1.69E-22 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PIRSF PIRSF000350 38 584 4.6E-88 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Gene3D G3DSA:3.50.50.60 361 458 8.7E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Pfam PF00364 Biotin-requiring enzyme 6 76 4.5E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 125 580 5.7E-148 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Gene3D G3DSA:3.90.1170.30 66 101 1.2E-4 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 SUPERFAMILY SSF55424 463 586 8.25E-41 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 413 435 1.2E-38 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 276 1.2E-38 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 147 1.2E-38 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 314 1.2E-38 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 384 400 1.2E-38 T 28-03-2018 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 161 171 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 SUPERFAMILY SSF51905 123 458 4.63E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06645 afd73d65925b745c80c7e7859b8641ae 592 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 467 575 6.9E-36 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 2.0E-148 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 Gene3D G3DSA:3.30.499.10 2 227 1.0E-59 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 Pfam PF00694 Aconitase C-terminal domain 657 788 2.1E-29 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 Gene3D G3DSA:3.20.19.10 619 860 3.9E-68 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 Gene3D G3DSA:3.40.1060.10 228 359 2.4E-41 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 Gene3D G3DSA:3.30.499.10 360 547 1.0E-54 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 162 170 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 191 204 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 402 413 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 360 374 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 464 477 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 138 151 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 267 280 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 205 220 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 PRINTS PR00415 Aconitase family signature 281 294 2.1E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 SUPERFAMILY SSF53732 22 587 5.1E-188 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 860 0.0 T 28-03-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AL504_RS22630 047618c458403e50967d95ae3ef0a38a 872 SUPERFAMILY SSF52016 599 858 3.34E-67 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS17850 05a703aa72eb1604e497abdb13c9b131 287 Pfam PF00756 Putative esterase 25 277 8.8E-53 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AL504_RS17850 05a703aa72eb1604e497abdb13c9b131 287 Gene3D G3DSA:3.40.50.1820 2 282 4.0E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS17850 05a703aa72eb1604e497abdb13c9b131 287 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 282 1.3E-135 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AL504_RS17850 05a703aa72eb1604e497abdb13c9b131 287 SUPERFAMILY SSF53474 5 283 4.09E-86 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS26460 bc64e70dadf70a195931ba0a83fe313a 281 SUPERFAMILY SSF51717 6 274 8.5E-99 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS26460 bc64e70dadf70a195931ba0a83fe313a 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 19 273 1.8E-98 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AL504_RS26460 bc64e70dadf70a195931ba0a83fe313a 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 19 34 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS26460 bc64e70dadf70a195931ba0a83fe313a 281 Gene3D G3DSA:3.20.20.20 2 278 3.8E-108 T 28-03-2018 AL504_RS26460 bc64e70dadf70a195931ba0a83fe313a 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 53 66 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS26460 bc64e70dadf70a195931ba0a83fe313a 281 Pfam PF00809 Pterin binding enzyme 20 259 4.9E-83 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 293 1.4E-9 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 SUPERFAMILY SSF51735 5 192 6.58E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 SUPERFAMILY SSF48179 192 311 8.16E-21 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 Gene3D G3DSA:3.90.226.10 481 794 7.4E-34 T 28-03-2018 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 SUPERFAMILY SSF52096 486 792 3.73E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 SUPERFAMILY SSF48179 344 459 2.3E-16 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 Gene3D G3DSA:1.10.1040.10 192 299 4.5E-15 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 190 7.5E-44 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 Gene3D G3DSA:1.10.1040.10 353 437 3.3E-10 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 Gene3D G3DSA:3.40.50.720 1 191 2.6E-45 T 28-03-2018 AL504_RS28365 4a1548630adfc2f915118c6100a6cb9e 796 Pfam PF00378 Enoyl-CoA hydratase/isomerase 489 624 3.2E-12 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 117 2.0E-59 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 Gene3D G3DSA:2.10.260.10 78 120 0.0085 T 28-03-2018 AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 Gene3D G3DSA:2.10.260.10 3 47 1.8E-4 T 28-03-2018 AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 120 1.5E-10 T 28-03-2018 IPR020603 MraZ domain AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 69 2.6E-13 T 28-03-2018 IPR020603 MraZ domain AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 48.166 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 SUPERFAMILY SSF89447 2 128 2.47E-37 T 28-03-2018 AL504_RS14795 04cf2ddb2897dda88fc6c797745b6e13 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 129 6.4E-35 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 Gene3D G3DSA:3.20.80.10 193 277 8.2E-22 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 SUPERFAMILY SSF55136 127 277 2.83E-34 T 28-03-2018 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 Gene3D G3DSA:3.20.80.10 118 192 7.0E-9 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 SMART SM00871 125 277 3.4E-37 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 Gene3D G3DSA:1.10.10.60 68 115 1.6E-12 T 28-03-2018 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 SMART SM00342 27 110 3.1E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 Pfam PF06445 GyrI-like small molecule binding domain 127 277 6.9E-30 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 Gene3D G3DSA:1.10.10.60 7 67 8.9E-11 T 28-03-2018 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 SUPERFAMILY SSF46689 63 112 3.85E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 SUPERFAMILY SSF46689 11 58 3.99E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 Pfam PF12833 Helix-turn-helix domain 33 111 4.9E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 94 110 4.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS19195 013fa660a4686439a90e3b8e7c69faac 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 79 94 4.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS17805 323887e357cfb7be2d0ef84fba2646ac 291 SUPERFAMILY SSF81452 13 290 8.5E-79 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17805 323887e357cfb7be2d0ef84fba2646ac 291 Gene3D G3DSA:1.20.120.80 80 291 5.6E-71 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17805 323887e357cfb7be2d0ef84fba2646ac 291 Gene3D G3DSA:1.10.287.70 9 79 7.2E-15 T 28-03-2018 AL504_RS17805 323887e357cfb7be2d0ef84fba2646ac 291 Pfam PF00510 Cytochrome c oxidase subunit III 16 291 4.7E-58 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 Pfam PF07687 Peptidase dimerisation domain 187 279 2.4E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 SUPERFAMILY SSF53187 3 198 6.29E-91 T 28-03-2018 AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 SUPERFAMILY SSF53187 299 397 6.29E-91 T 28-03-2018 AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 383 1.3E-110 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 Gene3D G3DSA:3.40.630.10 1 219 5.0E-54 T 28-03-2018 AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 Gene3D G3DSA:3.40.630.10 220 400 7.8E-27 T 28-03-2018 AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 PIRSF PIRSF005962 1 400 2.4E-125 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 SUPERFAMILY SSF55031 184 297 3.01E-30 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS19400 c0cc38467dca648ffb467a3d1b7594d9 400 Pfam PF01546 Peptidase family M20/M25/M40 73 393 1.3E-37 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS27100 ad9459b283a325f7b6d5a8d197dcbdd7 398 Pfam PF12536 Patatin phospholipase 277 381 7.1E-35 T 28-03-2018 IPR021095 Protein of unknown function DUF3734 AL504_RS27100 ad9459b283a325f7b6d5a8d197dcbdd7 398 Gene3D G3DSA:3.40.1090.10 6 248 1.1E-39 T 28-03-2018 AL504_RS27100 ad9459b283a325f7b6d5a8d197dcbdd7 398 Pfam PF01734 Patatin-like phospholipase 23 240 1.1E-21 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL504_RS27100 ad9459b283a325f7b6d5a8d197dcbdd7 398 SUPERFAMILY SSF52151 147 370 2.79E-52 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL504_RS27100 ad9459b283a325f7b6d5a8d197dcbdd7 398 SUPERFAMILY SSF52151 20 92 2.79E-52 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 PIRSF PIRSF001365 5 296 5.2E-66 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 16 286 2.5E-63 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 3.4E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 3.4E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 3.4E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 3.4E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 SMART SM01130 8 290 7.3E-79 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 Pfam PF00701 Dihydrodipicolinate synthetase family 9 286 9.3E-57 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 SUPERFAMILY SSF51569 10 286 1.15E-71 T 28-03-2018 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS13355 c189c11d35b860eafcdca7d3278936f8 299 Gene3D G3DSA:3.20.20.70 5 299 1.1E-69 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 1.4E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 SMART SM00344 4 110 7.6E-31 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 Gene3D G3DSA:3.30.70.920 57 148 1.3E-16 T 28-03-2018 AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 Pfam PF01037 Lrp/AsnC ligand binding domain 86 138 1.8E-13 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 SUPERFAMILY SSF54909 66 148 7.64E-14 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 6.5E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 6.5E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 6.5E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 Gene3D G3DSA:1.10.10.10 1 55 7.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 SUPERFAMILY SSF46785 4 63 1.04E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04500 eba810a886bc72a3975dc93d311c0715 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS30135 bfbd772ad5bb05b491718bf9c86790ad 433 Gene3D G3DSA:1.20.1250.20 13 223 1.1E-26 T 28-03-2018 AL504_RS30135 bfbd772ad5bb05b491718bf9c86790ad 433 Pfam PF07690 Major Facilitator Superfamily 281 426 4.8E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS30135 bfbd772ad5bb05b491718bf9c86790ad 433 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS30135 bfbd772ad5bb05b491718bf9c86790ad 433 SUPERFAMILY SSF103473 8 425 3.14E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS30135 bfbd772ad5bb05b491718bf9c86790ad 433 Gene3D G3DSA:1.20.1250.20 224 431 4.0E-25 T 28-03-2018 AL504_RS30135 bfbd772ad5bb05b491718bf9c86790ad 433 Pfam PF00083 Sugar (and other) transporter 19 220 3.1E-27 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 SUPERFAMILY SSF51126 909 1183 1.6E-22 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 SUPERFAMILY SSF51126 1460 1576 1.26E-22 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 SUPERFAMILY SSF51126 1311 1425 1.26E-22 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 SUPERFAMILY SSF51126 521 774 2.32E-22 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Gene3D G3DSA:2.160.20.20 834 1187 1.6E-31 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Gene3D G3DSA:2.160.20.20 378 776 4.6E-23 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Gene3D G3DSA:2.160.20.20 1213 1580 2.3E-34 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 660 795 4.0E-17 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1466 1912 7.4E-82 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1069 1218 2.7E-18 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 SMART SM00869 1629 1901 1.3E-32 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Pfam PF12951 Passenger-associated-transport-repeat 556 584 1.2E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Pfam PF12951 Passenger-associated-transport-repeat 963 990 1.6E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Pfam PF12951 Passenger-associated-transport-repeat 1354 1381 6.3E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Gene3D G3DSA:2.40.128.130 1590 1912 1.3E-32 T 28-03-2018 AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Pfam PF03797 Autotransporter beta-domain 1632 1890 5.5E-35 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 SUPERFAMILY SSF103515 1601 1912 1.02E-31 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Pfam PF03212 Pertactin 1090 1166 1.5E-5 T 28-03-2018 IPR004899 Pertactin, central region AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 Pfam PF03212 Pertactin 1493 1574 2.2E-6 T 28-03-2018 IPR004899 Pertactin, central region AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 962 993 1.3E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1353 1382 2.9E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS31410 1377f4774e580a1da98ebfd77249a16a 1912 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 555 586 3.4E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS05240 2afa9ed8347faad36b1621c731b4f316 405 Pfam PF07690 Major Facilitator Superfamily 26 200 2.5E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS05240 2afa9ed8347faad36b1621c731b4f316 405 Gene3D G3DSA:1.20.1250.20 15 206 3.9E-13 T 28-03-2018 AL504_RS05240 2afa9ed8347faad36b1621c731b4f316 405 Gene3D G3DSA:1.20.1250.20 212 400 9.9E-14 T 28-03-2018 AL504_RS05240 2afa9ed8347faad36b1621c731b4f316 405 SUPERFAMILY SSF103473 23 398 4.32E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS28990 9587b802868355f4ccdb782f16e55a4e 443 Gene3D G3DSA:1.20.1250.20 222 441 1.3E-20 T 28-03-2018 AL504_RS28990 9587b802868355f4ccdb782f16e55a4e 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS28990 9587b802868355f4ccdb782f16e55a4e 443 Pfam PF07690 Major Facilitator Superfamily 18 326 5.2E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS28990 9587b802868355f4ccdb782f16e55a4e 443 SUPERFAMILY SSF103473 1 423 6.28E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS28990 9587b802868355f4ccdb782f16e55a4e 443 Gene3D G3DSA:1.20.1250.20 6 221 7.3E-27 T 28-03-2018 AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 SUPERFAMILY SSF48008 101 232 9.68E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 3.3E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 Pfam PF07729 FCD domain 102 223 6.5E-25 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 SUPERFAMILY SSF46785 10 79 2.07E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 SMART SM00345 16 75 2.7E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 SMART SM00895 102 225 9.2E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 Gene3D G3DSA:1.20.120.530 97 240 2.0E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.8E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.8E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS08450 0ade513f77ee8d33e0d987b6e63b8c77 245 Gene3D G3DSA:1.10.10.10 4 77 3.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 SUPERFAMILY SSF47384 236 311 1.08E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 SUPERFAMILY SSF55874 330 469 1.83E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.0E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 3.0E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 3.0E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 469 3.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 Gene3D G3DSA:1.10.287.130 243 304 3.0E-10 T 28-03-2018 AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 SMART SM00387 361 471 5.2E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 SMART SM00388 253 318 2.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 311 8.3E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 Gene3D G3DSA:3.30.565.10 305 474 3.3E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12825 7613f0a2a615aab88c30eb06624f587f 474 Pfam PF08521 Two-component sensor kinase N-terminal 40 177 5.7E-37 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal AL504_RS12560 1605db287992fc4b6ae2954ca5a64e80 208 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 1 177 33.207 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12560 1605db287992fc4b6ae2954ca5a64e80 208 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 130 151 - T 28-03-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12560 1605db287992fc4b6ae2954ca5a64e80 208 SUPERFAMILY SSF143243 21 190 2.35E-51 T 28-03-2018 AL504_RS12560 1605db287992fc4b6ae2954ca5a64e80 208 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 31 168 1.9E-37 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12560 1605db287992fc4b6ae2954ca5a64e80 208 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 96 157 7.0E-23 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12560 1605db287992fc4b6ae2954ca5a64e80 208 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 170 4.6E-42 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 Gene3D G3DSA:3.40.1550.10 47 234 2.7E-38 T 28-03-2018 IPR028976 CheC-like domain AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 Gene3D G3DSA:2.30.330.10 240 331 5.7E-15 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 SUPERFAMILY SSF103039 51 231 1.07E-19 T 28-03-2018 IPR028976 CheC-like domain AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 6.6E-27 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 6.6E-27 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 6.6E-27 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 6.6E-27 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 6 322 1.8E-100 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 SUPERFAMILY SSF101801 251 325 1.22E-11 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 Pfam PF02154 Flagellar motor switch protein FliM 39 231 5.3E-71 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 PIRSF PIRSF002888 3 331 4.7E-91 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL504_RS06350 0bda66b36d5c74993dc2de3d935d5089 335 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 321 3.4E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL504_RS04145 309e2e3245b29e27d69dee9f6b0c9d24 509 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 441 3.0E-137 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL504_RS30670 9745265dc8cb7a2f0e7908a5100a8149 174 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 18 172 16.888 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL504_RS30670 9745265dc8cb7a2f0e7908a5100a8149 174 TIGRFAM TIGR00077 lspA: signal peptidase II 25 171 4.7E-39 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL504_RS30670 9745265dc8cb7a2f0e7908a5100a8149 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 111 126 1.9E-17 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL504_RS30670 9745265dc8cb7a2f0e7908a5100a8149 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 64 72 1.9E-17 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL504_RS30670 9745265dc8cb7a2f0e7908a5100a8149 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 147 163 1.9E-17 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL504_RS30670 9745265dc8cb7a2f0e7908a5100a8149 174 Pfam PF01252 Signal peptidase (SPase) II 27 166 2.8E-38 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL504_RS30670 9745265dc8cb7a2f0e7908a5100a8149 174 ProSitePatterns PS00855 Signal peptidases II signature. 114 126 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 Gene3D G3DSA:1.10.10.10 6 83 7.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 SUPERFAMILY SSF53850 93 297 5.91E-33 T 28-03-2018 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 8.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 Pfam PF03466 LysR substrate binding domain 93 295 8.8E-32 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 Gene3D G3DSA:3.40.190.10 96 178 5.3E-10 T 28-03-2018 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 Gene3D G3DSA:3.40.190.10 179 264 1.9E-19 T 28-03-2018 AL504_RS26190 35d44cb7f56c4975d51bded38362f31d 301 SUPERFAMILY SSF46785 5 82 8.11E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25080 ef8a702e43611e92e33017c49d70e5f9 348 SUPERFAMILY SSF56266 29 343 1.83E-68 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS25080 ef8a702e43611e92e33017c49d70e5f9 348 Pfam PF03576 Peptidase family S58 30 340 8.5E-59 T 28-03-2018 IPR005321 Peptidase S58, DmpA AL504_RS25080 ef8a702e43611e92e33017c49d70e5f9 348 Gene3D G3DSA:3.60.70.12 25 347 2.8E-104 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 SUPERFAMILY SSF51735 1 206 7.63E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 Gene3D G3DSA:3.40.50.720 1 228 1.4E-46 T 28-03-2018 AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 Pfam PF00106 short chain dehydrogenase 7 185 1.3E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.1E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.1E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 1.1E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.1E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 4.6E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 4.6E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06730 a8345e39bf973d2801c6186e1d7fdc2f 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 4.6E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 76 305 2.6E-34 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 277 303 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 PRINTS PR00046 Major sigma-70 factor signature 104 117 3.4E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 PRINTS PR00046 Major sigma-70 factor signature 257 269 3.4E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 PRINTS PR00046 Major sigma-70 factor signature 277 292 3.4E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 PRINTS PR00046 Major sigma-70 factor signature 292 303 3.4E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 Pfam PF04542 Sigma-70 region 2 80 149 1.0E-18 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 42 308 1.0E-122 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 SUPERFAMILY SSF88946 42 149 3.53E-39 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 104 117 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 24 309 51.701 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 SUPERFAMILY SSF88659 214 307 8.04E-18 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 Gene3D G3DSA:1.10.601.10 14 149 3.1E-35 T 28-03-2018 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 Pfam PF04545 Sigma-70, region 4 253 304 5.5E-16 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17840 9d9a6094a6b2ea023cbd9619faf52ea3 309 Gene3D G3DSA:1.10.10.10 247 309 5.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21215 30468e8e1300d182be61000aa35c0d88 607 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 31 191 1.1E-21 T 28-03-2018 IPR024618 Domain of unknown function DUF3857 AL504_RS21215 30468e8e1300d182be61000aa35c0d88 607 SUPERFAMILY SSF54001 249 367 1.04E-11 T 28-03-2018 AL504_RS21215 30468e8e1300d182be61000aa35c0d88 607 Pfam PF01841 Transglutaminase-like superfamily 249 353 3.3E-8 T 28-03-2018 IPR002931 Transglutaminase-like AL504_RS04940 f4214bc6c387e734b4f2031072221784 250 Gene3D G3DSA:3.40.190.10 26 151 2.6E-40 T 28-03-2018 AL504_RS04940 f4214bc6c387e734b4f2031072221784 250 SMART SM00062 30 249 3.7E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS04940 f4214bc6c387e734b4f2031072221784 250 SMART SM00079 30 248 8.2E-9 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL504_RS04940 f4214bc6c387e734b4f2031072221784 250 SUPERFAMILY SSF53850 4 249 7.7E-76 T 28-03-2018 AL504_RS04940 f4214bc6c387e734b4f2031072221784 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS04940 f4214bc6c387e734b4f2031072221784 250 Gene3D G3DSA:3.40.190.10 152 250 8.4E-19 T 28-03-2018 AL504_RS04940 f4214bc6c387e734b4f2031072221784 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 248 3.1E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS29455 291bed40d9cb2994f27b118de7727ac8 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 432 3.1E-89 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS29455 291bed40d9cb2994f27b118de7727ac8 438 PIRSF PIRSF006066 4 438 9.2E-95 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS29455 291bed40d9cb2994f27b118de7727ac8 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 425 3.3E-91 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 SUPERFAMILY SSF88659 163 239 3.55E-18 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 SUPERFAMILY SSF88659 80 145 2.18E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 Pfam PF04539 Sigma-70 region 3 87 142 8.9E-12 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 Gene3D G3DSA:1.10.10.10 80 130 8.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 PRINTS PR00046 Major sigma-70 factor signature 34 47 1.9E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 PRINTS PR00046 Major sigma-70 factor signature 58 66 1.9E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 PRINTS PR00046 Major sigma-70 factor signature 203 218 1.9E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 PRINTS PR00046 Major sigma-70 factor signature 218 229 1.9E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 PRINTS PR00046 Major sigma-70 factor signature 186 198 1.9E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 SUPERFAMILY SSF88946 7 79 1.19E-22 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 Pfam PF04545 Sigma-70, region 4 182 230 5.4E-14 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 Gene3D G3DSA:1.10.10.10 155 240 1.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 34 47 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 233 1.3E-32 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 1 236 62.352 T 28-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 9 234 1.4E-78 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 PIRSF PIRSF000770 3 250 9.8E-33 T 28-03-2018 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 Pfam PF04542 Sigma-70 region 2 10 79 1.7E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06555 2d0f21a06b37dd37067afd9f4eff342d 251 Gene3D G3DSA:1.10.1740.10 3 76 7.4E-19 T 28-03-2018 AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 Gene3D G3DSA:3.40.50.1240 1 248 8.7E-69 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 PIRSF PIRSF000709 2 111 7.9E-8 T 28-03-2018 AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 PIRSF PIRSF000709 133 221 0.078 T 28-03-2018 AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 129 1.2E-30 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 SUPERFAMILY SSF53254 1 245 2.36E-79 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 2 246 3.3E-118 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 SMART SM00855 3 189 7.8E-30 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL504_RS21385 3df45cf3d5ba8d24c069d4f5529ed1d7 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.487 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 41 302 9.9E-80 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 44 91 4.0E-19 T 28-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 PIRSF PIRSF000006 5 303 1.3E-101 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 Gene3D G3DSA:1.10.760.10 217 317 1.4E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 Gene3D G3DSA:1.10.760.10 98 216 9.6E-26 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 136 208 1.2E-13 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 223 296 1.1E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 SUPERFAMILY SSF46626 222 306 9.17E-25 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 SUPERFAMILY SSF46626 114 215 5.44E-30 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27235 77c2c43c2c86808b6408543843dc6762 317 SUPERFAMILY SSF46626 64 86 5.44E-30 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 Pfam PF08281 Sigma-70, region 4 129 178 1.6E-9 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 SUPERFAMILY SSF88659 118 179 9.81E-11 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 Pfam PF04542 Sigma-70 region 2 29 80 6.7E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 Gene3D G3DSA:1.10.1740.10 2 88 7.7E-13 T 28-03-2018 AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 Gene3D G3DSA:1.10.10.10 126 209 5.5E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 Gene3D G3DSA:1.25.40.10 210 430 5.8E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 178 4.0E-13 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS02165 d25a999c37d1948d39f82d660cf191ef 430 SUPERFAMILY SSF88946 11 80 7.06E-12 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 SUPERFAMILY SSF56645 1 250 6.94E-60 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 Gene3D G3DSA:1.10.540.10 1 130 5.8E-29 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 125 1.3E-17 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 226 6.2E-19 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 387 2.1E-37 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 SUPERFAMILY SSF47203 237 390 2.09E-47 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 PIRSF PIRSF016578 249 393 6.0E-12 T 28-03-2018 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 PIRSF PIRSF016578 141 203 0.58 T 28-03-2018 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 PIRSF PIRSF016578 11 88 3.3 T 28-03-2018 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 Gene3D G3DSA:2.40.110.10 131 228 5.6E-32 T 28-03-2018 AL504_RS18755 433a56d55ff751394ae7191cdc2dedba 408 Gene3D G3DSA:1.20.140.10 229 396 9.6E-47 T 28-03-2018 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 SMART SM01390 3 96 6.2E-49 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 Gene3D G3DSA:3.10.290.10 103 146 9.3E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 Pfam PF01479 S4 domain 98 144 6.1E-17 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 6.3E-32 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 SMART SM00363 97 161 3.5E-16 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 Gene3D G3DSA:1.10.1050.10 1 102 1.1E-43 T 28-03-2018 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 Gene3D G3DSA:1.10.1050.10 147 207 7.4E-15 T 28-03-2018 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 SUPERFAMILY SSF55174 3 207 1.18E-66 T 28-03-2018 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 34.738 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL504_RS20025 1ee80096358708fd0e4951cb4051d93f 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 2.4E-78 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL504_RS28450 3dc1f3d29c0fda9c0a87ea091959b9a1 369 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 350 8.0E-175 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AL504_RS28450 3dc1f3d29c0fda9c0a87ea091959b9a1 369 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 353 56.929 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AL504_RS28450 3dc1f3d29c0fda9c0a87ea091959b9a1 369 Gene3D G3DSA:3.90.25.10 250 369 3.4E-34 T 28-03-2018 AL504_RS28450 3dc1f3d29c0fda9c0a87ea091959b9a1 369 Gene3D G3DSA:3.90.25.10 205 249 2.3E-24 T 28-03-2018 AL504_RS28450 3dc1f3d29c0fda9c0a87ea091959b9a1 369 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 343 3.2E-157 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28450 3dc1f3d29c0fda9c0a87ea091959b9a1 369 SUPERFAMILY SSF51735 3 349 2.25E-84 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28450 3dc1f3d29c0fda9c0a87ea091959b9a1 369 Gene3D G3DSA:3.40.50.720 2 204 9.5E-24 T 28-03-2018 AL504_RS23200 05e80814a3ace075ebcb2c79feedb54e 279 SUPERFAMILY SSF51735 15 247 1.31E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23200 05e80814a3ace075ebcb2c79feedb54e 279 Gene3D G3DSA:3.40.50.720 14 239 2.1E-32 T 28-03-2018 AL504_RS23200 05e80814a3ace075ebcb2c79feedb54e 279 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 176 7.1E-21 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS09180 6faa2f02b3ba0747c994989dc34e0c52 250 Gene3D G3DSA:3.40.190.10 144 250 4.2E-16 T 28-03-2018 AL504_RS09180 6faa2f02b3ba0747c994989dc34e0c52 250 SMART SM00062 25 250 2.2E-48 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS09180 6faa2f02b3ba0747c994989dc34e0c52 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 247 1.8E-57 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS09180 6faa2f02b3ba0747c994989dc34e0c52 250 Gene3D G3DSA:3.40.190.10 10 143 1.7E-31 T 28-03-2018 AL504_RS09180 6faa2f02b3ba0747c994989dc34e0c52 250 SMART SM00079 25 250 0.0015 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL504_RS09180 6faa2f02b3ba0747c994989dc34e0c52 250 SUPERFAMILY SSF53850 1 248 1.09E-62 T 28-03-2018 AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 Pfam PF03466 LysR substrate binding domain 87 260 5.0E-29 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 SUPERFAMILY SSF53850 88 255 3.8E-28 T 28-03-2018 AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 Gene3D G3DSA:1.10.10.10 2 83 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 Gene3D G3DSA:3.40.190.10 175 253 1.1E-13 T 28-03-2018 AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 SUPERFAMILY SSF46785 2 110 4.99E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 8.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08165 a60d82dbeba0a82c0efca4d46c8f4e7f 280 Gene3D G3DSA:3.40.190.10 90 174 3.0E-16 T 28-03-2018 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 Gene3D G3DSA:3.30.1330.60 68 197 1.7E-45 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 ProSitePatterns PS01068 OmpA-like domain. 124 168 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 137 154 1.8E-9 T 28-03-2018 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 195 1.8E-9 T 28-03-2018 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 155 174 1.8E-9 T 28-03-2018 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 PRINTS PR01021 OMPA domain signature 122 137 5.8E-23 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 PRINTS PR01021 OMPA domain signature 137 153 5.8E-23 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 PRINTS PR01021 OMPA domain signature 92 114 5.8E-23 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 SUPERFAMILY SSF103088 83 192 7.72E-41 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS11450 2a1af2314ae07612cd603ad9881f34a3 197 Pfam PF00691 OmpA family 91 186 1.2E-26 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS12960 2cb1be3b1f0f14e576c8bf6c8645ffe5 517 SUPERFAMILY SSF52540 257 475 6.4E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12960 2cb1be3b1f0f14e576c8bf6c8645ffe5 517 Gene3D G3DSA:3.40.50.300 215 405 2.3E-33 T 28-03-2018 AL504_RS12960 2cb1be3b1f0f14e576c8bf6c8645ffe5 517 SUPERFAMILY SSF52540 18 212 2.18E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12960 2cb1be3b1f0f14e576c8bf6c8645ffe5 517 Gene3D G3DSA:1.10.8.60 406 477 8.5E-6 T 28-03-2018 AL504_RS12960 2cb1be3b1f0f14e576c8bf6c8645ffe5 517 SMART SM00382 265 401 6.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12960 2cb1be3b1f0f14e576c8bf6c8645ffe5 517 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 269 398 7.0E-27 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS12960 2cb1be3b1f0f14e576c8bf6c8645ffe5 517 Gene3D G3DSA:3.40.50.300 5 214 0.23 T 28-03-2018 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 Gene3D G3DSA:3.30.420.40 198 367 2.1E-48 T 28-03-2018 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 SUPERFAMILY SSF100934 508 610 5.89E-20 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 SUPERFAMILY SSF53067 188 383 9.88E-69 T 28-03-2018 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 6.5E-291 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 470 486 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 199 209 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 335 351 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 366 386 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 PRINTS PR00301 70kDa heat shock protein signature 389 408 1.4E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 SUPERFAMILY SSF53067 4 184 9.55E-66 T 28-03-2018 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 637 37.068 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 Pfam PF00012 Hsp70 protein 4 604 3.5E-266 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 SUPERFAMILY SSF100920 385 541 1.57E-60 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 Gene3D G3DSA:1.20.1270.10 533 620 3.8E-21 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 Gene3D G3DSA:2.60.34.10 391 532 2.3E-66 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL504_RS13435 e8d1ad5ccff33daab60cae1263cfbf9e 641 Gene3D G3DSA:3.30.420.40 1 197 2.5E-81 T 28-03-2018 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 Gene3D G3DSA:3.90.380.10 163 422 7.2E-46 T 28-03-2018 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 Pfam PF00355 Rieske [2Fe-2S] domain 54 137 1.2E-17 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 SUPERFAMILY SSF50022 21 175 8.51E-45 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 Gene3D G3DSA:2.102.10.10 50 162 3.1E-20 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 SUPERFAMILY SSF55961 186 420 3.45E-45 T 28-03-2018 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 210 420 4.7E-17 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 111 131 1.5E-21 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 69 84 1.5E-21 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 159 185 1.5E-21 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 198 220 1.5E-21 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 90 110 1.5E-21 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS03860 69f87191eb812792f7538521d4cb2b01 422 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 97 120 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AL504_RS13190 2747336083261477b646dd05df933890 292 Gene3D G3DSA:3.40.190.10 77 177 5.1E-18 T 28-03-2018 AL504_RS13190 2747336083261477b646dd05df933890 292 Gene3D G3DSA:1.10.10.10 1 76 9.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13190 2747336083261477b646dd05df933890 292 Pfam PF03466 LysR substrate binding domain 86 288 6.5E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS13190 2747336083261477b646dd05df933890 292 SUPERFAMILY SSF53850 88 289 2.41E-35 T 28-03-2018 AL504_RS13190 2747336083261477b646dd05df933890 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 1.2E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS13190 2747336083261477b646dd05df933890 292 Gene3D G3DSA:3.40.190.10 178 262 2.7E-16 T 28-03-2018 AL504_RS13190 2747336083261477b646dd05df933890 292 SUPERFAMILY SSF46785 1 109 2.42E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01090 6418dc7682c4c5e433304d17ca201824 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 320 1.8E-19 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS01090 6418dc7682c4c5e433304d17ca201824 321 Gene3D G3DSA:3.40.50.720 121 292 9.7E-59 T 28-03-2018 AL504_RS01090 6418dc7682c4c5e433304d17ca201824 321 SUPERFAMILY SSF51735 108 290 1.64E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01090 6418dc7682c4c5e433304d17ca201824 321 SUPERFAMILY SSF52283 12 141 1.8E-29 T 28-03-2018 AL504_RS01090 6418dc7682c4c5e433304d17ca201824 321 Gene3D G3DSA:3.40.50.720 8 120 2.2E-27 T 28-03-2018 AL504_RS01090 6418dc7682c4c5e433304d17ca201824 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 289 6.4E-56 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 7.5E-35 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 SUPERFAMILY SSF88946 3 104 9.42E-33 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 Gene3D G3DSA:1.10.1740.10 1 107 6.6E-31 T 28-03-2018 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 Pfam PF08281 Sigma-70, region 4 134 182 6.8E-18 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 Gene3D G3DSA:1.10.10.10 109 190 7.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 Pfam PF04542 Sigma-70 region 2 25 92 5.1E-19 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 SUPERFAMILY SSF88659 125 187 1.33E-17 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12135 1e4b2ad393f54a301ed4b09b79d577c4 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 191 5.3E-95 T 28-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS30225 e77e5c32ef16eecec8639ec9ae2869f5 287 Pfam PF00494 Squalene/phytoene synthase 13 264 2.1E-81 T 28-03-2018 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 AL504_RS30225 e77e5c32ef16eecec8639ec9ae2869f5 287 Gene3D G3DSA:1.10.600.10 2 278 1.0E-90 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS30225 e77e5c32ef16eecec8639ec9ae2869f5 287 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 28-03-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS30225 e77e5c32ef16eecec8639ec9ae2869f5 287 SUPERFAMILY SSF48576 3 276 3.12E-92 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS30225 e77e5c32ef16eecec8639ec9ae2869f5 287 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 275 2.0E-118 T 28-03-2018 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 SMART SM00382 311 482 2.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 SMART SM00382 31 197 6.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 Pfam PF16326 ABC transporter C-terminal domain 536 604 1.0E-15 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 Pfam PF12848 ABC transporter 191 266 4.0E-10 T 28-03-2018 IPR032781 ABC-transporter extension domain AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 Pfam PF00005 ABC transporter 22 152 2.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 Pfam PF00005 ABC transporter 303 436 5.9E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 SUPERFAMILY SSF52540 281 481 1.17E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 Gene3D G3DSA:3.40.50.300 2 231 5.1E-54 T 28-03-2018 AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 Gene3D G3DSA:3.40.50.300 247 518 5.7E-56 T 28-03-2018 AL504_RS14805 daf5879f69a7f103c6e900e04a32d0ba 611 SUPERFAMILY SSF52540 6 200 5.52E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19255 cae1732e2bb587babf74b9c02bccda4d 298 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 15 223 5.6E-28 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase AL504_RS19255 cae1732e2bb587babf74b9c02bccda4d 298 SUPERFAMILY SSF51197 4 234 4.21E-48 T 28-03-2018 AL504_RS19255 cae1732e2bb587babf74b9c02bccda4d 298 Gene3D G3DSA:2.60.120.620 1 263 2.7E-36 T 28-03-2018 AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 SUPERFAMILY SSF46785 5 115 3.88E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 Gene3D G3DSA:1.10.10.10 1 87 4.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 SUPERFAMILY SSF53850 94 297 2.53E-37 T 28-03-2018 AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 Pfam PF03466 LysR substrate binding domain 93 293 2.5E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 Gene3D G3DSA:3.40.190.10 95 178 1.8E-18 T 28-03-2018 AL504_RS03985 8484886d4e3e64e8d01fb582f19b4494 300 Gene3D G3DSA:3.40.190.10 179 268 1.8E-16 T 28-03-2018 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 5.1E-113 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 SUPERFAMILY SSF53067 2 122 1.36E-26 T 28-03-2018 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 SUPERFAMILY SSF53067 102 312 1.36E-44 T 28-03-2018 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 5.2E-131 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.6E-48 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.6E-48 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.6E-48 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 3.6E-48 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.6E-48 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.6E-48 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 Gene3D G3DSA:3.30.420.40 1 144 5.3E-36 T 28-03-2018 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 Gene3D G3DSA:3.30.420.40 145 293 1.5E-15 T 28-03-2018 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 Pfam PF00814 Glycoprotease family 24 311 4.5E-98 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS05190 146df26d1fab62aae78043ac40c12ee9 343 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 339 61.225 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 SMART SM00895 90 217 9.9E-26 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 SUPERFAMILY SSF46785 13 109 1.11E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 2.4E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 Gene3D G3DSA:1.10.10.10 7 82 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 SMART SM00345 22 80 6.9E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 Pfam PF07729 FCD domain 90 216 6.6E-29 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 SUPERFAMILY SSF48008 85 220 3.92E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS22635 2ec4c11481167f018a94084df8822ac5 236 Gene3D G3DSA:1.20.120.530 83 235 5.2E-37 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 113 1.0E-33 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 SUPERFAMILY SSF46548 108 236 3.49E-39 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 SUPERFAMILY SSF54292 5 107 4.01E-30 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 Gene3D G3DSA:3.10.20.30 1 107 3.3E-34 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 230 2.2E-85 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 4.2E-10 T 28-03-2018 AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 Gene3D G3DSA:1.10.1060.10 108 238 5.8E-31 T 28-03-2018 AL504_RS11755 7bf1feaa2f2f9d7e43bff23d080c68ac 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 SUPERFAMILY SSF55120 1 251 2.3E-88 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 240 1.2E-65 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 Pfam PF01416 tRNA pseudouridine synthase 10 105 9.7E-8 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 Pfam PF01416 tRNA pseudouridine synthase 145 247 5.4E-30 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 Gene3D G3DSA:3.30.70.580 1 107 1.1E-33 T 28-03-2018 AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 Gene3D G3DSA:3.30.70.660 108 245 6.6E-39 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 246 33.974 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS08580 697059d9aaf47c5a7c6fbd5f3e326176 273 PIRSF PIRSF001430 1 260 1.0E-77 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS27370 37373271cebbef170b45df16ca073236 461 SUPERFAMILY SSF53383 94 449 9.54E-65 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS27370 37373271cebbef170b45df16ca073236 461 SUPERFAMILY SSF46785 18 93 9.87E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27370 37373271cebbef170b45df16ca073236 461 Gene3D G3DSA:3.40.640.10 119 359 2.1E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS27370 37373271cebbef170b45df16ca073236 461 SMART SM00345 25 84 7.8E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS27370 37373271cebbef170b45df16ca073236 461 Pfam PF00155 Aminotransferase class I and II 125 445 2.4E-17 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS27370 37373271cebbef170b45df16ca073236 461 Gene3D G3DSA:3.90.1150.10 360 452 5.5E-12 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS27370 37373271cebbef170b45df16ca073236 461 Gene3D G3DSA:1.10.10.10 10 86 1.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27370 37373271cebbef170b45df16ca073236 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 7.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS14525 b8f141e80540f03fa37e4d6d59f6c51e 287 SUPERFAMILY SSF53474 8 252 1.2E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS14525 b8f141e80540f03fa37e4d6d59f6c51e 287 Gene3D G3DSA:3.40.50.1820 2 256 2.3E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS14525 b8f141e80540f03fa37e4d6d59f6c51e 287 PIRSF PIRSF017388 2 150 1.3E-22 T 28-03-2018 IPR012354 Esterase/lipase GO:0052689 AL504_RS14525 b8f141e80540f03fa37e4d6d59f6c51e 287 PIRSF PIRSF017388 159 255 1.7E-14 T 28-03-2018 IPR012354 Esterase/lipase GO:0052689 AL504_RS14525 b8f141e80540f03fa37e4d6d59f6c51e 287 Pfam PF12697 Alpha/beta hydrolase family 9 241 9.3E-13 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS07490 223bda3aceb2c78ed950480e85fa025c 210 SUPERFAMILY SSF48695 12 189 2.66E-63 T 28-03-2018 IPR011031 Multihaem cytochrome AL504_RS07490 223bda3aceb2c78ed950480e85fa025c 210 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 5 188 4.9E-99 T 28-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 AL504_RS07490 223bda3aceb2c78ed950480e85fa025c 210 PIRSF PIRSF000013 1 196 6.5E-105 T 28-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AL504_RS07490 223bda3aceb2c78ed950480e85fa025c 210 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 188 3.3E-76 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL504_RS07490 223bda3aceb2c78ed950480e85fa025c 210 Gene3D G3DSA:1.10.468.10 59 205 1.9E-28 T 28-03-2018 AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 Pfam PF01047 MarR family 34 87 4.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 SUPERFAMILY SSF46785 9 139 1.59E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 Gene3D G3DSA:1.10.10.10 2 142 8.0E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23330 d291c9a3af33e66080926199eb545d3b 148 SMART SM00347 24 124 3.8E-19 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS08885 84e7616a8120d2be08573ab80faf1157 360 PIRSF PIRSF029215 1 355 2.4E-53 T 28-03-2018 IPR016913 Uncharacterised conserved protein UCP029215 AL504_RS08885 84e7616a8120d2be08573ab80faf1157 360 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 14 159 1.3E-35 T 28-03-2018 IPR016913 Uncharacterised conserved protein UCP029215 AL504_RS02310 483c295bc5ad8aabbad98ef791584e2e 154 Gene3D G3DSA:3.40.630.30 1 149 6.7E-30 T 28-03-2018 AL504_RS02310 483c295bc5ad8aabbad98ef791584e2e 154 SUPERFAMILY SSF55729 7 151 4.46E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS02310 483c295bc5ad8aabbad98ef791584e2e 154 Pfam PF00583 Acetyltransferase (GNAT) family 38 143 2.4E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS11765 8a7b631e6761d974a6195fbfff24dc6b 127 SUPERFAMILY SSF81343 11 127 2.45E-24 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11765 8a7b631e6761d974a6195fbfff24dc6b 127 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 125 8.2E-34 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL504_RS11765 8a7b631e6761d974a6195fbfff24dc6b 127 Gene3D G3DSA:1.20.1300.10 10 127 1.4E-17 T 28-03-2018 AL504_RS11765 8a7b631e6761d974a6195fbfff24dc6b 127 PIRSF PIRSF000169 8 127 6.0E-38 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL504_RS11765 8a7b631e6761d974a6195fbfff24dc6b 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 114 2.2E-14 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS16435 3fa95a6b43fa94faea9accf992925de5 226 SUPERFAMILY SSF53335 8 189 1.69E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS16435 3fa95a6b43fa94faea9accf992925de5 226 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 17 211 5.2E-36 T 28-03-2018 AL504_RS16435 3fa95a6b43fa94faea9accf992925de5 226 Gene3D G3DSA:3.40.50.150 2 224 3.2E-30 T 28-03-2018 AL504_RS07405 489e687cac9cf725693170d24938ae94 314 SUPERFAMILY SSF46785 2 84 1.94E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07405 489e687cac9cf725693170d24938ae94 314 Pfam PF03466 LysR substrate binding domain 90 293 2.8E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07405 489e687cac9cf725693170d24938ae94 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07405 489e687cac9cf725693170d24938ae94 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07405 489e687cac9cf725693170d24938ae94 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07405 489e687cac9cf725693170d24938ae94 314 Gene3D G3DSA:1.10.10.10 1 85 1.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07405 489e687cac9cf725693170d24938ae94 314 SUPERFAMILY SSF53850 92 297 1.63E-41 T 28-03-2018 AL504_RS07405 489e687cac9cf725693170d24938ae94 314 Gene3D G3DSA:3.40.190.10 91 177 1.5E-25 T 28-03-2018 AL504_RS07405 489e687cac9cf725693170d24938ae94 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 59 1.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07405 489e687cac9cf725693170d24938ae94 314 Gene3D G3DSA:3.40.190.10 178 268 1.7E-20 T 28-03-2018 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 Pfam PF00175 Oxidoreductase NAD-binding domain 205 306 2.1E-24 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 SUPERFAMILY SSF63380 97 193 8.42E-23 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 SUPERFAMILY SSF52343 197 328 1.44E-39 T 28-03-2018 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 Pfam PF00970 Oxidoreductase FAD-binding domain 102 195 2.5E-12 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 Gene3D G3DSA:2.40.30.10 97 192 1.6E-20 T 28-03-2018 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 129 139 2.0E-11 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 223 2.0E-11 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 241 252 2.0E-11 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 229 238 2.0E-11 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 145 152 2.0E-11 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 302 2.0E-11 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 Gene3D G3DSA:3.40.50.80 196 329 2.8E-28 T 28-03-2018 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 152 7.9E-20 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 204 223 7.9E-20 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 129 141 7.9E-20 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 294 302 7.9E-20 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 229 238 7.9E-20 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 188 197 7.9E-20 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 Gene3D G3DSA:3.10.20.30 1 96 3.3E-22 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 SUPERFAMILY SSF54292 1 88 2.36E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS17375 321937d3ff3ea1b66bb0919aa72f36e2 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 80 4.3E-15 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS19295 309997706af5b88d54864f329acc98a6 310 Gene3D G3DSA:3.40.190.10 95 184 8.6E-21 T 28-03-2018 AL504_RS19295 309997706af5b88d54864f329acc98a6 310 Gene3D G3DSA:1.10.10.10 1 91 3.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19295 309997706af5b88d54864f329acc98a6 310 SUPERFAMILY SSF46785 2 83 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19295 309997706af5b88d54864f329acc98a6 310 Gene3D G3DSA:3.40.190.10 185 271 1.5E-21 T 28-03-2018 AL504_RS19295 309997706af5b88d54864f329acc98a6 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19295 309997706af5b88d54864f329acc98a6 310 Pfam PF03466 LysR substrate binding domain 96 295 3.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS19295 309997706af5b88d54864f329acc98a6 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19295 309997706af5b88d54864f329acc98a6 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19295 309997706af5b88d54864f329acc98a6 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19295 309997706af5b88d54864f329acc98a6 310 SUPERFAMILY SSF53850 96 302 1.49E-37 T 28-03-2018 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 SUPERFAMILY SSF51182 21 194 7.83E-10 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 SMART SM00342 185 267 6.2E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 Pfam PF02311 AraC-like ligand binding domain 33 124 4.7E-10 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 Gene3D G3DSA:1.10.10.60 228 266 1.7E-9 T 28-03-2018 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 Gene3D G3DSA:1.10.10.60 179 227 9.2E-9 T 28-03-2018 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 Gene3D G3DSA:2.60.120.280 30 178 4.1E-6 T 28-03-2018 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 SUPERFAMILY SSF46689 222 267 1.61E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 263 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS02220 33bc182c2b655f44a8921b6b88d06b41 274 Pfam PF12833 Helix-turn-helix domain 191 267 4.3E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS06830 cf5a78f3970f7eb72b59b129f04bf610 330 Pfam PF12693 GspL periplasmic domain 176 318 1.6E-19 T 28-03-2018 IPR025691 GspL periplasmic domain AL504_RS06830 cf5a78f3970f7eb72b59b129f04bf610 330 SUPERFAMILY SSF53067 16 140 3.37E-12 T 28-03-2018 AL504_RS10995 562ee8465983e39a0808694c2fdbb44d 553 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 5 307 5.4E-64 T 28-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AL504_RS10995 562ee8465983e39a0808694c2fdbb44d 553 Pfam PF02690 Na+/Pi-cotransporter 163 241 5.2E-11 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL504_RS10995 562ee8465983e39a0808694c2fdbb44d 553 Pfam PF02690 Na+/Pi-cotransporter 16 150 3.5E-34 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL504_RS10995 562ee8465983e39a0808694c2fdbb44d 553 SUPERFAMILY SSF109755 332 543 7.85E-22 T 28-03-2018 AL504_RS10995 562ee8465983e39a0808694c2fdbb44d 553 Gene3D G3DSA:1.20.58.220 445 542 2.1E-4 T 28-03-2018 AL504_RS10995 562ee8465983e39a0808694c2fdbb44d 553 Gene3D G3DSA:1.20.58.220 328 441 6.2E-9 T 28-03-2018 AL504_RS24360 f8af22bf9bcedc8fd7a14c4361a33f32 323 Gene3D G3DSA:3.40.50.720 113 288 3.4E-52 T 28-03-2018 AL504_RS24360 f8af22bf9bcedc8fd7a14c4361a33f32 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 318 8.3E-16 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS24360 f8af22bf9bcedc8fd7a14c4361a33f32 323 SUPERFAMILY SSF51735 106 287 3.53E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24360 f8af22bf9bcedc8fd7a14c4361a33f32 323 SUPERFAMILY SSF52283 1 138 1.59E-20 T 28-03-2018 AL504_RS24360 f8af22bf9bcedc8fd7a14c4361a33f32 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 287 2.9E-53 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS24360 f8af22bf9bcedc8fd7a14c4361a33f32 323 Gene3D G3DSA:3.40.50.720 1 112 2.0E-24 T 28-03-2018 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 Gene3D G3DSA:3.40.47.10 2 290 1.5E-48 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 ProSitePatterns PS00737 Thiolases signature 2. 372 388 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 PIRSF PIRSF000429 1 427 8.5E-130 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 Pfam PF00108 Thiolase, N-terminal domain 6 280 6.4E-56 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 SUPERFAMILY SSF53901 288 424 2.97E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 Pfam PF02803 Thiolase, C-terminal domain 288 424 5.5E-40 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 ProSitePatterns PS00099 Thiolases active site. 407 420 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 Gene3D G3DSA:3.40.47.10 291 423 1.1E-29 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 SUPERFAMILY SSF53901 6 287 2.38E-60 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS28380 0ad7313c0a8716463ab08143472ebcf1 430 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 424 1.6E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 SMART SM00870 8 328 2.5E-123 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 Pfam PF00710 Asparaginase, N-terminal 9 194 6.4E-56 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 3 334 1.3E-114 T 28-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 11 19 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 PIRSF PIRSF500176 6 332 3.8E-78 T 28-03-2018 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 PIRSF PIRSF001220 3 333 7.8E-85 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 Gene3D G3DSA:3.40.50.40 222 334 1.9E-27 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 PRINTS PR00139 Asparaginase/glutaminase family signature 9 20 3.5E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 PRINTS PR00139 Asparaginase/glutaminase family signature 268 286 3.5E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 PRINTS PR00139 Asparaginase/glutaminase family signature 88 106 3.5E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 SUPERFAMILY SSF53774 5 333 6.8E-94 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 Gene3D G3DSA:3.40.50.1170 5 215 7.6E-55 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL504_RS19510 ae87b5571622d07166914b1609c499fc 334 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 89 99 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 Gene3D G3DSA:3.40.50.2300 2 134 2.7E-30 T 28-03-2018 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 Gene3D G3DSA:1.10.10.10 135 206 6.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 SMART SM00421 145 202 1.4E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 Pfam PF00072 Response regulator receiver domain 12 121 1.2E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 4.4E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 SMART SM00448 10 121 2.4E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 SUPERFAMILY SSF52172 8 146 2.99E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.2E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.2E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.2E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS12835 1634a92f52736fe44793cb06de2ffd4a 207 SUPERFAMILY SSF46894 139 202 7.82E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS04480 271bbd761b2c563a8eb48131d4d6cd50 288 Pfam PF13503 Domain of unknown function (DUF4123) 34 158 2.1E-20 T 28-03-2018 IPR025391 Domain of unknown function DUF4123 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 SMART SM00155 306 332 0.024 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 SMART SM00155 116 143 2.3E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 Pfam PF13091 PLD-like domain 237 357 5.2E-24 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 Pfam PF13091 PLD-like domain 29 140 1.7E-15 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 Gene3D G3DSA:3.30.870.10 217 377 3.4E-30 T 28-03-2018 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 SUPERFAMILY SSF56024 9 189 4.19E-40 T 28-03-2018 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 Gene3D G3DSA:3.30.870.10 4 207 2.7E-30 T 28-03-2018 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 Hamap MF_01917 Cardiolipin synthase B [clsB]. 7 403 46.499 T 28-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 AL504_RS20260 df657a2b221e63c81389a401335e1978 403 SUPERFAMILY SSF56024 199 377 5.83E-38 T 28-03-2018 AL504_RS18560 7a7e85c0e056ced54c677a8c7e0b4810 265 Gene3D G3DSA:3.60.21.10 1 256 8.1E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS18560 7a7e85c0e056ced54c677a8c7e0b4810 265 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 255 38.089 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AL504_RS18560 7a7e85c0e056ced54c677a8c7e0b4810 265 Pfam PF00149 Calcineurin-like phosphoesterase 2 198 8.2E-17 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS18560 7a7e85c0e056ced54c677a8c7e0b4810 265 SUPERFAMILY SSF56300 1 255 2.73E-56 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS21765 b0f36f43644082ea4da5553e53841a00 239 PIRSF PIRSF039137 1 239 1.2E-103 T 28-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AL504_RS21765 b0f36f43644082ea4da5553e53841a00 239 SMART SM00382 30 218 1.6E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS21765 b0f36f43644082ea4da5553e53841a00 239 Gene3D G3DSA:3.40.50.300 1 239 3.6E-56 T 28-03-2018 AL504_RS21765 b0f36f43644082ea4da5553e53841a00 239 SUPERFAMILY SSF52540 4 236 1.36E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21765 b0f36f43644082ea4da5553e53841a00 239 Pfam PF00005 ABC transporter 21 166 1.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1202 0.0 T 28-03-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Gene3D G3DSA:3.30.1360.40 790 888 6.4E-27 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Gene3D G3DSA:3.30.470.20 209 442 5.3E-96 T 28-03-2018 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1159 1176 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Gene3D G3DSA:3.30.1490.20 124 208 2.6E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 472 751 9.0E-90 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.7E-61 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SUPERFAMILY SSF50891 923 1055 4.17E-26 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Gene3D G3DSA:3.40.50.20 1 123 3.4E-48 T 28-03-2018 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 107 1.9E-41 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SUPERFAMILY SSF52440 2 111 3.96E-44 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 9.1E-37 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SUPERFAMILY SSF51230 1127 1202 1.11E-19 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Pfam PF00364 Biotin-requiring enzyme 1143 1202 6.3E-14 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SMART SM00878 336 440 1.9E-59 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SMART SM00796 806 1039 1.8E-106 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SMART SM00797 471 768 2.8E-171 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SUPERFAMILY SSF56059 83 352 3.36E-69 T 28-03-2018 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 448 773 1.6E-97 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Gene3D G3DSA:2.40.100.10 894 1057 5.5E-46 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SUPERFAMILY SSF50891 632 758 1.18E-32 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 807 1029 1.5E-45 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SUPERFAMILY SSF51246 330 442 5.76E-37 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 SUPERFAMILY SSF160467 808 900 4.18E-17 T 28-03-2018 AL504_RS25280 182a544aba3fbb8dabcf91925fb81451 1211 Gene3D G3DSA:2.40.50.100 1122 1208 1.9E-19 T 28-03-2018 AL504_RS28415 00417548829982e340fb8ffc8473eefa 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 159 9.2E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS28415 00417548829982e340fb8ffc8473eefa 186 Gene3D G3DSA:2.160.10.10 23 185 2.4E-29 T 28-03-2018 AL504_RS28415 00417548829982e340fb8ffc8473eefa 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL504_RS28415 00417548829982e340fb8ffc8473eefa 186 SUPERFAMILY SSF51161 25 183 1.39E-36 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS15745 d6ef07dfffdf7233dee816af105c1981 375 PIRSF PIRSF016636 34 374 1.3E-72 T 28-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AL504_RS15745 d6ef07dfffdf7233dee816af105c1981 375 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 123 332 2.2E-14 T 28-03-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT AL504_RS21745 3f0402a4ddf725d9bd96768f0e3b2ab6 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 8.5E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS21745 3f0402a4ddf725d9bd96768f0e3b2ab6 201 SUPERFAMILY SSF47616 73 199 6.68E-14 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS21745 3f0402a4ddf725d9bd96768f0e3b2ab6 201 SUPERFAMILY SSF52833 1 77 7.33E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS21745 3f0402a4ddf725d9bd96768f0e3b2ab6 201 Gene3D G3DSA:1.20.1050.10 87 201 1.1E-11 T 28-03-2018 AL504_RS21745 3f0402a4ddf725d9bd96768f0e3b2ab6 201 Pfam PF13410 Glutathione S-transferase, C-terminal domain 124 187 5.7E-6 T 28-03-2018 AL504_RS21745 3f0402a4ddf725d9bd96768f0e3b2ab6 201 Gene3D G3DSA:3.40.30.10 1 86 7.3E-15 T 28-03-2018 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 SMART SM00388 276 343 5.3E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 497 8.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 8.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 455 8.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 441 8.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 Gene3D G3DSA:3.30.565.10 348 510 2.8E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 SUPERFAMILY SSF55874 333 502 6.81E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 341 3.2E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 Gene3D G3DSA:1.10.287.130 266 339 1.4E-9 T 28-03-2018 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 SMART SM00387 386 500 3.7E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 SUPERFAMILY SSF47384 269 341 9.61E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS08635 266778a11a9794712ff090a08a59adc8 512 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 498 5.0E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS24490 93d608c8a008ed5384b9b4a2ecd77e96 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24490 93d608c8a008ed5384b9b4a2ecd77e96 300 Gene3D G3DSA:1.10.10.10 1 85 1.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24490 93d608c8a008ed5384b9b4a2ecd77e96 300 Gene3D G3DSA:3.40.190.10 87 177 5.8E-20 T 28-03-2018 AL504_RS24490 93d608c8a008ed5384b9b4a2ecd77e96 300 SUPERFAMILY SSF46785 4 112 5.15E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24490 93d608c8a008ed5384b9b4a2ecd77e96 300 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24490 93d608c8a008ed5384b9b4a2ecd77e96 300 SUPERFAMILY SSF53850 90 296 1.5E-41 T 28-03-2018 AL504_RS24490 93d608c8a008ed5384b9b4a2ecd77e96 300 Gene3D G3DSA:3.40.190.10 178 263 1.7E-20 T 28-03-2018 AL504_RS06215 4fdcf075b6380d3d6f9ab3494e67b728 237 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 14 216 1.1E-32 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL504_RS06215 4fdcf075b6380d3d6f9ab3494e67b728 237 Pfam PF01914 MarC family integral membrane protein 13 220 3.4E-35 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL504_RS12255 e0b2de85d43ab39c7b345139b21162c4 437 SUPERFAMILY SSF103473 9 431 7.19E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS12255 e0b2de85d43ab39c7b345139b21162c4 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS12255 e0b2de85d43ab39c7b345139b21162c4 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 318 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS12255 e0b2de85d43ab39c7b345139b21162c4 437 Pfam PF00083 Sugar (and other) transporter 12 435 4.6E-36 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS12255 e0b2de85d43ab39c7b345139b21162c4 437 Gene3D G3DSA:1.20.1250.20 223 437 1.0E-22 T 28-03-2018 AL504_RS12255 e0b2de85d43ab39c7b345139b21162c4 437 Gene3D G3DSA:1.20.1250.20 3 222 8.4E-22 T 28-03-2018 AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 Pfam PF07969 Amidohydrolase family 349 467 9.0E-17 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 Pfam PF07969 Amidohydrolase family 54 201 3.2E-15 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 SUPERFAMILY SSF51556 64 423 7.15E-79 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 Gene3D G3DSA:2.30.40.10 405 481 0.0028 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 Gene3D G3DSA:2.30.40.10 9 73 4.0E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 SUPERFAMILY SSF51338 5 64 1.15E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 SUPERFAMILY SSF51338 423 473 1.15E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS16115 2911319ed6403492eb5467d1e543df23 499 Gene3D G3DSA:3.20.20.140 74 404 1.5E-69 T 28-03-2018 AL504_RS19490 745fbe5a0e3ad2e28eb9fbee3bf81fb2 229 SUPERFAMILY SSF53335 17 224 2.25E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS19490 745fbe5a0e3ad2e28eb9fbee3bf81fb2 229 PIRSF PIRSF003078 9 226 1.7E-49 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL504_RS19490 745fbe5a0e3ad2e28eb9fbee3bf81fb2 229 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 24 221 24.384 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL504_RS19490 745fbe5a0e3ad2e28eb9fbee3bf81fb2 229 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 36 222 1.9E-42 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL504_RS19490 745fbe5a0e3ad2e28eb9fbee3bf81fb2 229 Gene3D G3DSA:3.40.50.150 4 229 4.6E-30 T 28-03-2018 AL504_RS19490 745fbe5a0e3ad2e28eb9fbee3bf81fb2 229 Pfam PF02527 rRNA small subunit methyltransferase G 33 217 5.2E-45 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 Pfam PF00664 ABC transporter transmembrane region 45 297 3.0E-14 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 Gene3D G3DSA:1.20.1560.10 10 339 7.5E-37 T 28-03-2018 AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 Gene3D G3DSA:3.40.50.300 340 588 9.2E-67 T 28-03-2018 AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 SMART SM00382 377 562 5.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 SUPERFAMILY SSF52540 347 584 1.41E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 Pfam PF00005 ABC transporter 368 516 6.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23700 db68e529e77e8f621fdbe6f08997a8ea 599 SUPERFAMILY SSF90123 14 334 1.96E-43 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS31330 91aaa82e627a76128a30e79ccfe22272 264 Gene3D G3DSA:3.40.50.300 1 252 3.7E-45 T 28-03-2018 AL504_RS31330 91aaa82e627a76128a30e79ccfe22272 264 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS31330 91aaa82e627a76128a30e79ccfe22272 264 SMART SM00382 27 240 1.6E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS31330 91aaa82e627a76128a30e79ccfe22272 264 Pfam PF00005 ABC transporter 18 168 2.9E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS31330 91aaa82e627a76128a30e79ccfe22272 264 SUPERFAMILY SSF52540 2 240 1.55E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13270 11a0d413f05f2a347aee8ee9b0b42c3c 493 Gene3D G3DSA:2.30.40.10 396 462 9.1E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS13270 11a0d413f05f2a347aee8ee9b0b42c3c 493 SUPERFAMILY SSF51556 56 414 4.76E-80 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS13270 11a0d413f05f2a347aee8ee9b0b42c3c 493 Gene3D G3DSA:3.20.20.140 66 395 6.4E-75 T 28-03-2018 AL504_RS13270 11a0d413f05f2a347aee8ee9b0b42c3c 493 Gene3D G3DSA:2.30.40.10 1 65 2.9E-16 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS13270 11a0d413f05f2a347aee8ee9b0b42c3c 493 SUPERFAMILY SSF51338 1 55 1.53E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS13270 11a0d413f05f2a347aee8ee9b0b42c3c 493 SUPERFAMILY SSF51338 414 473 1.53E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS13270 11a0d413f05f2a347aee8ee9b0b42c3c 493 Pfam PF07969 Amidohydrolase family 44 458 4.1E-45 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS30645 8a5eb180aa77ec69b90460f80de0a700 234 Pfam PF03575 Peptidase family S51 3 207 2.1E-56 T 28-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AL504_RS30645 8a5eb180aa77ec69b90460f80de0a700 234 Gene3D G3DSA:3.40.50.880 1 230 1.5E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS30645 8a5eb180aa77ec69b90460f80de0a700 234 SUPERFAMILY SSF52317 3 216 1.98E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS03350 f89789ca5e2235c1e08509bbbe08a72f 508 SUPERFAMILY SSF46894 2 97 2.78E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS03350 f89789ca5e2235c1e08509bbbe08a72f 508 SUPERFAMILY SSF48452 332 423 1.87E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS03350 f89789ca5e2235c1e08509bbbe08a72f 508 Gene3D G3DSA:1.25.40.10 250 432 6.2E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS03350 f89789ca5e2235c1e08509bbbe08a72f 508 SMART SM00862 20 96 2.0E-12 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS03350 f89789ca5e2235c1e08509bbbe08a72f 508 Gene3D G3DSA:1.10.10.10 1 103 1.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03350 f89789ca5e2235c1e08509bbbe08a72f 508 Pfam PF00486 Transcriptional regulatory protein, C terminal 20 95 7.4E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS02025 5423acda0cf60db9b0d3418dabc52b73 405 SUPERFAMILY SSF48452 28 135 1.07E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS02025 5423acda0cf60db9b0d3418dabc52b73 405 Gene3D G3DSA:1.25.40.10 1 202 1.4E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS02025 5423acda0cf60db9b0d3418dabc52b73 405 Gene3D G3DSA:1.10.10.10 214 320 2.7E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02025 5423acda0cf60db9b0d3418dabc52b73 405 Gene3D G3DSA:1.10.10.10 327 385 2.2E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18280 a08dacc85893470fcccb2ccf36ddad09 346 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 211 9.8E-30 T 28-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AL504_RS18280 a08dacc85893470fcccb2ccf36ddad09 346 Pfam PF12833 Helix-turn-helix domain 261 338 3.4E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS18280 a08dacc85893470fcccb2ccf36ddad09 346 Gene3D G3DSA:1.10.10.60 290 344 7.9E-12 T 28-03-2018 AL504_RS18280 a08dacc85893470fcccb2ccf36ddad09 346 Gene3D G3DSA:1.10.10.60 236 289 0.18 T 28-03-2018 AL504_RS18280 a08dacc85893470fcccb2ccf36ddad09 346 SUPERFAMILY SSF46689 289 340 6.27E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS18280 a08dacc85893470fcccb2ccf36ddad09 346 SMART SM00342 253 336 4.2E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS17115 aee4f533649d3a2b5ebe93db85d23f8f 239 Pfam PF00834 Ribulose-phosphate 3 epimerase family 15 215 5.9E-87 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS17115 aee4f533649d3a2b5ebe93db85d23f8f 239 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 42 56 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS17115 aee4f533649d3a2b5ebe93db85d23f8f 239 Gene3D G3DSA:3.20.20.70 4 232 5.5E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS17115 aee4f533649d3a2b5ebe93db85d23f8f 239 PIRSF PIRSF001461 9 238 8.8E-101 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS17115 aee4f533649d3a2b5ebe93db85d23f8f 239 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 15 228 1.2E-93 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS17115 aee4f533649d3a2b5ebe93db85d23f8f 239 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 144 166 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS17115 aee4f533649d3a2b5ebe93db85d23f8f 239 SUPERFAMILY SSF51366 13 229 9.42E-72 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS05005 a55a5c2ff2f5b73543db9e0affbb8cf0 416 Gene3D G3DSA:3.40.50.2300 172 304 7.5E-22 T 28-03-2018 AL504_RS05005 a55a5c2ff2f5b73543db9e0affbb8cf0 416 SUPERFAMILY SSF53822 27 412 5.5E-76 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS05005 a55a5c2ff2f5b73543db9e0affbb8cf0 416 Pfam PF13458 Periplasmic binding protein 27 358 5.1E-53 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS05005 a55a5c2ff2f5b73543db9e0affbb8cf0 416 Gene3D G3DSA:3.40.50.2300 305 382 0.025 T 28-03-2018 AL504_RS05005 a55a5c2ff2f5b73543db9e0affbb8cf0 416 Gene3D G3DSA:3.40.50.2300 12 171 6.9E-30 T 28-03-2018 AL504_RS07760 9fb73dc5449673151def4a35f8c80510 111 SUPERFAMILY SSF52833 2 104 6.38E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS07760 9fb73dc5449673151def4a35f8c80510 111 Gene3D G3DSA:3.40.30.10 1 105 5.7E-10 T 28-03-2018 AL504_RS07760 9fb73dc5449673151def4a35f8c80510 111 Pfam PF00085 Thioredoxin 5 98 3.5E-5 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 Pfam PF07729 FCD domain 87 211 3.0E-20 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 1.6E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 Gene3D G3DSA:1.20.120.530 79 230 4.0E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 SMART SM00895 86 213 9.3E-14 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 Gene3D G3DSA:1.10.10.10 1 78 9.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 SUPERFAMILY SSF46785 10 80 1.53E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 SMART SM00345 18 76 3.1E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS27900 9c59110b6d798d1de5ee7d03c249c8ff 235 SUPERFAMILY SSF48008 82 220 7.59E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS02790 0186d1c1f19321c31341b8a1d55a2667 396 SUPERFAMILY SSF53850 40 273 1.71E-39 T 28-03-2018 AL504_RS02790 0186d1c1f19321c31341b8a1d55a2667 396 Gene3D G3DSA:3.40.190.10 38 141 2.1E-10 T 28-03-2018 AL504_RS02790 0186d1c1f19321c31341b8a1d55a2667 396 Gene3D G3DSA:3.40.190.10 142 343 1.4E-30 T 28-03-2018 AL504_RS02790 0186d1c1f19321c31341b8a1d55a2667 396 Pfam PF13379 NMT1-like family 37 276 1.1E-48 T 28-03-2018 AL504_RS17450 6ffb99d57d5b37678e0b7bd49abd1a8a 687 PIRSF PIRSF015380 1 687 4.1E-217 T 28-03-2018 IPR011385 Putative site-specific recombinase Gcr AL504_RS17450 6ffb99d57d5b37678e0b7bd49abd1a8a 687 Pfam PF10136 Site-specific recombinase 34 677 3.3E-230 T 28-03-2018 IPR011385 Putative site-specific recombinase Gcr AL504_RS17450 6ffb99d57d5b37678e0b7bd49abd1a8a 687 Gene3D G3DSA:1.20.1080.10 333 651 1.6E-38 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 SUPERFAMILY SSF111352 2 391 5.62E-126 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 ProSitePatterns PS01219 Ammonium transporters signature. 166 191 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 TIGRFAM TIGR00836 amt: ammonium transporter 5 410 1.9E-134 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 Pfam PF00909 Ammonium Transporter Family 8 410 1.8E-121 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 PRINTS PR00342 Rhesus blood group protein signature 205 223 3.1E-7 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 PRINTS PR00342 Rhesus blood group protein signature 105 121 3.1E-7 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 PRINTS PR00342 Rhesus blood group protein signature 236 258 3.1E-7 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 PRINTS PR00342 Rhesus blood group protein signature 291 309 3.1E-7 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AL504_RS08385 a8b503dea4592cf2326e7c1c7bd134a6 412 Gene3D G3DSA:1.10.3430.10 1 391 1.2E-127 T 28-03-2018 AL504_RS09175 bc72240a72352cebe12014f1a5af7ccf 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.9E-28 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS09175 bc72240a72352cebe12014f1a5af7ccf 217 Gene3D G3DSA:1.10.3720.10 1 217 1.0E-43 T 28-03-2018 AL504_RS09175 bc72240a72352cebe12014f1a5af7ccf 217 SUPERFAMILY SSF161098 13 206 7.06E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS09175 bc72240a72352cebe12014f1a5af7ccf 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 213 3.3E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF103515 4024 4306 6.67E-67 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF103515 3970 3997 6.67E-67 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1362 1392 1.3E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 922 952 4.4E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2217 2247 2.2E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1542 1573 1.9E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 491 521 1.9E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3621 3650 1.1E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 751 781 1.0E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2151 2179 4.7E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3688 3715 1.8E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2761 2787 3.0E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3174 3203 3.7E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2581 2611 8.3E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2936 2964 8.3E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1805 1836 1.8E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1895 1922 2.6E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1978 2009 2.7E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2847 2878 6.0E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 836 866 2.9E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 408 436 3.3E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 577 608 6.5E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1628 1658 7.6E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3245 3276 3.9E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 665 695 6.7E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2675 2706 1.9E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3020 3050 2.8E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2065 2096 2.4E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3536 3560 9.2E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3106 3134 4.3E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 898 1201 1.57E-20 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 3362 3592 6.28E-6 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 384 783 7.85E-23 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 815 893 7.85E-23 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 2739 3068 8.79E-31 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 1202 1422 3.45E-9 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:2.160.20.20 3128 3369 0.0027 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:2.160.20.20 684 894 0.059 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:2.160.20.20 1682 1885 0.0015 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:2.160.20.20 3558 3716 2.0E-6 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:2.160.20.20 2645 2886 0.017 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:2.160.20.20 1390 1681 0.031 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:2.160.20.20 2236 2432 0.0062 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 1430 1785 1.21E-27 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 3604 3890 3.14E-23 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SMART SM00869 4028 4296 1.8E-52 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 2995 3361 3.45E-29 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:3.30.1390.40 2152 2171 0.016 T 28-03-2018 AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:3.30.1390.40 3020 3038 0.042 T 28-03-2018 AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:3.30.1390.40 3108 3125 0.16 T 28-03-2018 AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:3.30.1390.40 1979 1997 0.12 T 28-03-2018 AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Gene3D G3DSA:3.30.1390.40 2066 2084 0.011 T 28-03-2018 AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 2444 2740 6.28E-7 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 1953 2250 1.07E-26 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 2288 2341 1.07E-26 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 SUPERFAMILY SSF51126 2381 2445 1.07E-26 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 579 606 6.9E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2762 2787 1.5E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 837 865 9.8E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3532 3559 3.8E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3752 3781 0.44 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 751 780 0.01 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2676 2705 1.5E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1807 1835 4.7E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3107 3134 1.4E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1543 1569 5.0E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3623 3650 2.1E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1629 1657 3.2E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 492 520 1.7E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3020 3048 1.1E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 407 435 5.3E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1454 1483 0.014 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2310 2339 8.8E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3688 3715 1.1E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1892 1921 8.3E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1979 2008 2.3E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2848 2877 4.6E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2935 2963 1.2E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2583 2610 9.7E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1082 1111 8.0E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3246 3275 5.9E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1363 1391 1.2E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2152 2179 9.7E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 923 950 8.2E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 3175 3203 1.4E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 666 693 3.2E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2218 2246 3.8E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 1725 1746 0.036 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS04195 9d756cfd2d55a78dc7d3f64fb1ce707e 4306 Pfam PF12951 Passenger-associated-transport-repeat 2066 2094 8.9E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SUPERFAMILY SSF55326 648 843 3.4E-64 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SUPERFAMILY SSF109736 165 230 2.09E-21 T 28-03-2018 AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Pfam PF02769 AIR synthase related protein, C-terminal domain 447 604 5.5E-27 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Pfam PF02769 AIR synthase related protein, C-terminal domain 854 1017 2.7E-14 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SUPERFAMILY SSF55326 231 437 3.0E-56 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SUPERFAMILY SSF52317 1088 1348 5.21E-86 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Gene3D G3DSA:3.30.1330.10 642 840 1.7E-20 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Gene3D G3DSA:3.30.1330.10 193 229 4.9E-4 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Gene3D G3DSA:3.30.1330.10 230 439 4.7E-44 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1091 1348 9.2E-98 T 28-03-2018 AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SUPERFAMILY SSF56042 443 683 1.36E-47 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Gene3D G3DSA:3.90.650.10 440 632 1.3E-28 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Gene3D G3DSA:3.90.650.10 847 1047 1.2E-35 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SMART SM01211 1091 1348 2.4E-136 T 28-03-2018 AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SUPERFAMILY SSF56042 852 1084 8.82E-49 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1349 20.46 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 SUPERFAMILY SSF82697 5 160 3.66E-43 T 28-03-2018 AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 9 1348 0.0 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS00525 a2c20bc856fd12a02ce701915ffff8cb 1349 Gene3D G3DSA:3.40.50.880 1090 1349 7.3E-29 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS18770 4e9d9ebad7da9dc5fbf4bb60c3499e77 181 Gene3D G3DSA:1.10.10.10 98 180 6.6E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18770 4e9d9ebad7da9dc5fbf4bb60c3499e77 181 SUPERFAMILY SSF88659 115 176 5.23E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18770 4e9d9ebad7da9dc5fbf4bb60c3499e77 181 Pfam PF08281 Sigma-70, region 4 120 172 3.7E-17 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18770 4e9d9ebad7da9dc5fbf4bb60c3499e77 181 Gene3D G3DSA:1.10.1740.10 6 76 1.2E-15 T 28-03-2018 AL504_RS18770 4e9d9ebad7da9dc5fbf4bb60c3499e77 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 175 1.5E-26 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18770 4e9d9ebad7da9dc5fbf4bb60c3499e77 181 SUPERFAMILY SSF88946 8 89 1.61E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18770 4e9d9ebad7da9dc5fbf4bb60c3499e77 181 Pfam PF04542 Sigma-70 region 2 19 79 4.2E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 Gene3D G3DSA:3.30.420.40 1 245 2.1E-47 T 28-03-2018 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 443 2.0E-19 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 Gene3D G3DSA:3.30.420.40 246 496 5.9E-38 T 28-03-2018 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 PIRSF PIRSF000538 3 492 4.3E-69 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 SUPERFAMILY SSF53067 255 486 2.2E-38 T 28-03-2018 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 356 376 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 SUPERFAMILY SSF53067 5 256 4.23E-40 T 28-03-2018 AL504_RS01440 490eca44bb5a97d764b562a2ea4db1d6 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 1.5E-31 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 Gene3D G3DSA:3.40.190.10 176 264 1.5E-27 T 28-03-2018 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 SUPERFAMILY SSF53850 89 297 8.32E-47 T 28-03-2018 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 Gene3D G3DSA:1.10.10.10 3 87 2.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 Pfam PF03466 LysR substrate binding domain 88 293 3.9E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.5E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 Gene3D G3DSA:3.40.190.10 88 175 5.8E-14 T 28-03-2018 AL504_RS20635 7e832cc25d02fefccb762e36bb3152a5 307 SUPERFAMILY SSF46785 4 111 6.18E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 SUPERFAMILY SSF54999 5 101 5.49E-38 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 Gene3D G3DSA:3.30.70.600 3 103 7.8E-37 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 5.6E-36 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.66 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 SMART SM01403 7 101 1.8E-56 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.4E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.4E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.4E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19695 21d2822f5ea1628a34d6d8705668527e 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 6.5E-46 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 7.2E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.2E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.2E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.2E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.2E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.2E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13160 65345480667bc62ed845c877b60bd612 260 Gene3D G3DSA:3.40.50.720 37 260 5.6E-61 T 28-03-2018 AL504_RS13160 65345480667bc62ed845c877b60bd612 260 Gene3D G3DSA:3.40.50.720 1 36 7.9E-8 T 28-03-2018 AL504_RS13160 65345480667bc62ed845c877b60bd612 260 SUPERFAMILY SSF51735 3 259 2.38E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13160 65345480667bc62ed845c877b60bd612 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS13160 65345480667bc62ed845c877b60bd612 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 258 2.0E-57 T 28-03-2018 AL504_RS13160 65345480667bc62ed845c877b60bd612 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 259 1.1E-105 T 28-03-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 Gene3D G3DSA:1.10.287.40 2 107 8.4E-23 T 28-03-2018 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 448 38.829 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 SUPERFAMILY SSF55681 139 444 2.62E-95 T 28-03-2018 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 PIRSF PIRSF001529 1 451 3.8E-163 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 110 2.4E-26 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 443 3.2E-152 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 251 426 6.8E-35 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 Gene3D G3DSA:3.30.930.10 108 451 1.4E-89 T 28-03-2018 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 PRINTS PR00981 Seryl-tRNA synthetase signature 378 394 1.2E-31 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 PRINTS PR00981 Seryl-tRNA synthetase signature 291 303 1.2E-31 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 PRINTS PR00981 Seryl-tRNA synthetase signature 343 356 1.2E-31 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 PRINTS PR00981 Seryl-tRNA synthetase signature 303 316 1.2E-31 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 PRINTS PR00981 Seryl-tRNA synthetase signature 360 376 1.2E-31 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL504_RS13220 1c733085a5f96b88a2803e4f5e6f7f20 451 SUPERFAMILY SSF46589 1 115 1.78E-27 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL504_RS20330 c15b1d31474c9181a937699e57dfab1f 653 SUPERFAMILY SSF53756 330 639 1.1E-16 T 28-03-2018 AL504_RS20330 c15b1d31474c9181a937699e57dfab1f 653 Gene3D G3DSA:3.40.50.2000 432 622 1.5E-7 T 28-03-2018 AL504_RS20095 b70f1484ea44eb64f83daae45ed5a4ec 109 Gene3D G3DSA:3.30.920.10 1 109 7.3E-25 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS20095 b70f1484ea44eb64f83daae45ed5a4ec 109 Hamap MF_00142 Protein CyaY [cyaY]. 1 107 23.619 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS20095 b70f1484ea44eb64f83daae45ed5a4ec 109 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 106 1.6E-33 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS20095 b70f1484ea44eb64f83daae45ed5a4ec 109 SUPERFAMILY SSF55387 1 107 6.8E-29 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS20095 b70f1484ea44eb64f83daae45ed5a4ec 109 SMART SM01219 1 108 2.5E-37 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS20095 b70f1484ea44eb64f83daae45ed5a4ec 109 ProSitePatterns PS01344 Frataxin family signature. 52 66 - T 28-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS20095 b70f1484ea44eb64f83daae45ed5a4ec 109 Pfam PF01491 Frataxin-like domain 1 103 2.8E-21 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Gene3D G3DSA:3.40.50.720 10 134 1.7E-39 T 28-03-2018 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 SUPERFAMILY SSF52210 141 303 1.7E-37 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 SUPERFAMILY SSF56059 489 701 5.18E-28 T 28-03-2018 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Gene3D G3DSA:3.40.50.261 135 305 2.3E-39 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Pfam PF13380 CoA binding domain 19 142 5.0E-22 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 SUPERFAMILY SSF51735 5 146 6.3E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Gene3D G3DSA:3.30.1490.20 508 567 1.8E-17 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 SMART SM00881 14 109 2.4E-33 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 SUPERFAMILY SSF52210 308 464 6.93E-27 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Gene3D G3DSA:3.30.470.20 568 710 6.8E-20 T 28-03-2018 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Pfam PF13549 ATP-grasp domain 486 701 3.7E-47 T 28-03-2018 AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 165 301 3.4E-42 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AL504_RS18745 de838f16384f92cfc04c18df6465fe09 713 Gene3D G3DSA:3.40.50.261 306 467 1.3E-27 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS01020 37f687a7328415b7a797f16c76fe4006 167 SUPERFAMILY SSF142433 2 159 3.14E-40 T 28-03-2018 IPR008136 CinA, C-terminal AL504_RS01020 37f687a7328415b7a797f16c76fe4006 167 Pfam PF02464 Competence-damaged protein 5 155 1.2E-37 T 28-03-2018 IPR008136 CinA, C-terminal AL504_RS01020 37f687a7328415b7a797f16c76fe4006 167 Gene3D G3DSA:3.90.950.20 1 163 4.6E-42 T 28-03-2018 AL504_RS01020 37f687a7328415b7a797f16c76fe4006 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 156 3.8E-27 T 28-03-2018 IPR008136 CinA, C-terminal AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 Pfam PF00158 Sigma-54 interaction domain 137 302 1.3E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 SMART SM00448 2 111 1.7E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 SMART SM00382 156 322 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 Gene3D G3DSA:1.10.10.60 384 441 8.0E-15 T 28-03-2018 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 Gene3D G3DSA:3.40.50.2300 1 119 3.5E-27 T 28-03-2018 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 Gene3D G3DSA:3.40.50.300 131 307 1.8E-27 T 28-03-2018 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 SUPERFAMILY SSF52172 1 180 5.83E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 SUPERFAMILY SSF52540 136 377 3.6E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 5.6E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 5.6E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 SUPERFAMILY SSF46689 348 439 5.38E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 Pfam PF00072 Response regulator receiver domain 5 108 1.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 Gene3D G3DSA:1.10.8.60 309 380 6.0E-23 T 28-03-2018 AL504_RS04345 56cac3d3163413dc0e4a0b66563d41f4 455 Pfam PF02954 Bacterial regulatory protein, Fis family 398 439 4.9E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 Pfam PF02421 Ferrous iron transport protein B 7 166 2.6E-53 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 Gene3D G3DSA:3.40.50.300 2 270 1.3E-26 T 28-03-2018 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 Pfam PF07670 Nucleoside recognition 449 578 7.7E-25 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 Pfam PF07670 Nucleoside recognition 280 374 1.9E-10 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 SUPERFAMILY SSF52540 6 179 6.29E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03715 e693dd232967c488e3937081f7b289db 607 Pfam PF07664 Ferrous iron transport protein B C terminus 392 444 1.4E-13 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 57 72 2.4E-7 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 2.4E-7 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS03715 e693dd232967c488e3937081f7b289db 607 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 29 47 2.4E-7 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 5.3E-69 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 SUPERFAMILY SSF53901 7 276 1.32E-69 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 Pfam PF02803 Thiolase, C-terminal domain 277 397 4.4E-45 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 PIRSF PIRSF000429 2 399 1.0E-125 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 Gene3D G3DSA:3.40.47.10 1 279 1.5E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 2.0E-136 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 SUPERFAMILY SSF53901 278 397 7.48E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS28360 6b5f593e4e2835834c8d322fb1b93543 399 Gene3D G3DSA:3.40.47.10 280 396 2.3E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS17580 60c987c89ee7339d683594d4a739ca16 348 ProSitePatterns PS01053 Arginase family signature. 270 291 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL504_RS17580 60c987c89ee7339d683594d4a739ca16 348 Pfam PF00491 Arginase family 71 338 1.1E-85 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS17580 60c987c89ee7339d683594d4a739ca16 348 PIRSF PIRSF036979 50 345 1.2E-95 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS17580 60c987c89ee7339d683594d4a739ca16 348 Gene3D G3DSA:3.40.800.10 24 348 3.8E-94 T 28-03-2018 AL504_RS17580 60c987c89ee7339d683594d4a739ca16 348 SUPERFAMILY SSF52768 63 344 2.16E-87 T 28-03-2018 AL504_RS17580 60c987c89ee7339d683594d4a739ca16 348 TIGRFAM TIGR01230 agmatinase: agmatinase 65 339 1.8E-61 T 28-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AL504_RS10495 eb6ec85aa53da7371d963944268749cc 291 Pfam PF05013 N-formylglutamate amidohydrolase 24 257 1.0E-67 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase AL504_RS10495 eb6ec85aa53da7371d963944268749cc 291 Gene3D G3DSA:3.40.630.40 10 290 3.8E-79 T 28-03-2018 AL504_RS10495 eb6ec85aa53da7371d963944268749cc 291 SUPERFAMILY SSF53187 18 287 3.45E-87 T 28-03-2018 AL504_RS20785 f80d5fd0ebaed656ac8f433c23710880 236 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 34 230 2.1E-35 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL504_RS20785 f80d5fd0ebaed656ac8f433c23710880 236 Gene3D G3DSA:3.40.630.40 32 234 1.6E-33 T 28-03-2018 AL504_RS20785 f80d5fd0ebaed656ac8f433c23710880 236 SMART SM00646 93 231 1.9E-7 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL504_RS20785 f80d5fd0ebaed656ac8f433c23710880 236 SUPERFAMILY SSF53187 33 231 1.1E-28 T 28-03-2018 AL504_RS22360 95d71519ee1c49be065e350a0551b2c8 339 Pfam PF04773 FecR protein 127 218 3.1E-14 T 28-03-2018 IPR006860 FecR protein AL504_RS22360 95d71519ee1c49be065e350a0551b2c8 339 PIRSF PIRSF018266 5 338 5.8E-65 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS22360 95d71519ee1c49be065e350a0551b2c8 339 Pfam PF16220 Domain of unknown function (DUF4880) 15 55 8.1E-7 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 SUPERFAMILY SSF47144 80 166 5.23E-18 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 4 170 20.922 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 163 2.8E-14 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 Gene3D G3DSA:1.10.287.110 2 88 5.7E-9 T 28-03-2018 IPR001623 DnaJ domain AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 SMART SM00271 4 69 1.9E-5 T 28-03-2018 IPR001623 DnaJ domain AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 Gene3D G3DSA:1.20.1280.20 89 170 1.6E-18 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 16 165 6.3E-28 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL504_RS31275 0f58784d531efb196975e4ae6649b28d 170 SUPERFAMILY SSF46565 5 75 6.67E-17 T 28-03-2018 IPR001623 DnaJ domain AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 82 100 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 179 190 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 48 64 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 290 305 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 364 377 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 311 328 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 216 243 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 PRINTS PR00992 Alanine racemase signature 273 288 1.8E-42 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 Hamap MF_01201 Alanine racemase. 15 382 28.121 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 TIGRFAM TIGR00492 alr: alanine racemase 18 380 1.2E-78 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 Gene3D G3DSA:2.40.37.10 244 388 2.1E-50 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 Gene3D G3DSA:3.20.20.10 14 243 3.9E-29 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 53 63 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 Pfam PF00842 Alanine racemase, C-terminal domain 257 378 1.1E-35 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 SUPERFAMILY SSF51419 22 258 3.76E-42 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 Pfam PF01168 Alanine racemase, N-terminal domain 22 243 3.5E-44 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 SMART SM01005 257 382 9.9E-53 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS15275 b301dd83c8547bea54bb4d9597c540b4 388 SUPERFAMILY SSF50621 252 379 9.42E-40 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 2.5E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 SUPERFAMILY SSF53383 121 492 4.27E-81 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 Gene3D G3DSA:3.90.1150.10 366 493 1.5E-22 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 Gene3D G3DSA:3.40.640.10 153 365 1.2E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 SMART SM00345 27 86 4.0E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 Pfam PF00155 Aminotransferase class I and II 145 454 7.8E-17 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 Gene3D G3DSA:1.10.10.10 14 88 3.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03830 d48c2bf4d3ba544a0d60136de5cfce48 498 SUPERFAMILY SSF46785 22 90 2.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28615 366b63939577bdfa1d474625c31bd20c 320 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 317 8.6E-49 T 28-03-2018 IPR017592 Pilus assembly, Flp-type CpaB AL504_RS28615 366b63939577bdfa1d474625c31bd20c 320 SMART SM00858 56 117 6.2E-10 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS28615 366b63939577bdfa1d474625c31bd20c 320 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 119 231 1.5E-28 T 28-03-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AL504_RS28615 366b63939577bdfa1d474625c31bd20c 320 Gene3D G3DSA:3.90.1210.10 54 118 3.3E-12 T 28-03-2018 AL504_RS28615 366b63939577bdfa1d474625c31bd20c 320 Pfam PF08666 SAF domain 57 116 1.6E-8 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 SMART SM00437 278 560 1.8E-74 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 330 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 SMART SM00493 3 125 1.4E-16 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS18995 da62148568cb009ba802d64637c1b661 878 SMART SM00436 125 220 2.8E-20 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 619 1.4E-167 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 SUPERFAMILY SSF56712 3 613 5.23E-166 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Pfam PF01131 DNA topoisomerase 155 598 1.1E-111 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 5.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 190 208 5.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 5.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 5.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 523 537 5.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Pfam PF13342 C-terminal repeat of topoisomerase 649 708 3.9E-21 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Pfam PF13342 C-terminal repeat of topoisomerase 754 814 1.3E-19 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Gene3D G3DSA:3.40.50.140 3 152 1.4E-32 T 28-03-2018 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Gene3D G3DSA:1.10.460.10 158 357 1.1E-36 T 28-03-2018 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Gene3D G3DSA:1.10.460.10 489 620 4.4E-21 T 28-03-2018 AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Pfam PF01751 Toprim domain 4 131 2.2E-12 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS18995 da62148568cb009ba802d64637c1b661 878 Gene3D G3DSA:2.70.20.10 371 488 4.5E-26 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL504_RS02360 adf896ed0ec8114cc069f7ef146d2514 381 Gene3D G3DSA:3.40.430.10 227 349 0.04 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS02360 adf896ed0ec8114cc069f7ef146d2514 381 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 292 371 2.7E-12 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AL504_RS02360 adf896ed0ec8114cc069f7ef146d2514 381 SUPERFAMILY SSF142764 12 378 6.54E-66 T 28-03-2018 AL504_RS02360 adf896ed0ec8114cc069f7ef146d2514 381 Pfam PF07005 Putative sugar-binding N-terminal domain 12 220 2.4E-34 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL504_RS02360 adf896ed0ec8114cc069f7ef146d2514 381 Gene3D G3DSA:3.40.50.10840 10 226 5.5E-41 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL504_RS20745 83cdc3db5e4505171e21cb4ed7069a56 582 Pfam PF17287 POTRA domain 167 219 9.4E-11 T 28-03-2018 IPR035251 ShlB, POTRA domain AL504_RS20745 83cdc3db5e4505171e21cb4ed7069a56 582 PIRSF PIRSF029745 8 582 1.0E-116 T 28-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AL504_RS20745 83cdc3db5e4505171e21cb4ed7069a56 582 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 224 538 1.7E-86 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AL504_RS20745 83cdc3db5e4505171e21cb4ed7069a56 582 Gene3D G3DSA:3.10.20.310 102 166 1.5E-7 T 28-03-2018 AL504_RS20745 83cdc3db5e4505171e21cb4ed7069a56 582 Gene3D G3DSA:2.40.160.50 191 582 2.3E-39 T 28-03-2018 AL504_RS20745 83cdc3db5e4505171e21cb4ed7069a56 582 Pfam PF08479 POTRA domain, ShlB-type 93 166 1.8E-11 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 SUPERFAMILY SSF46626 42 171 5.0E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 Gene3D G3DSA:1.10.760.10 27 159 6.8E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 Gene3D G3DSA:1.10.760.10 178 318 2.4E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 SUPERFAMILY SSF46626 332 432 8.6E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 PIRSF PIRSF000018 21 446 1.9E-142 T 28-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 Pfam PF00034 Cytochrome c 47 145 5.2E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 Pfam PF00034 Cytochrome c 332 416 6.2E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 SUPERFAMILY SSF46626 191 303 7.13E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22730 459dcb9f40789a89af6588ff011aa68d 450 Gene3D G3DSA:1.10.760.10 319 443 6.4E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS00180 85de848e966e728bea95908d7566900f 670 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 653 670 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS00180 85de848e966e728bea95908d7566900f 670 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 28-03-2018 IPR010916 TonB box, conserved site AL504_RS00180 85de848e966e728bea95908d7566900f 670 Pfam PF00593 TonB dependent receptor 200 669 4.7E-64 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00180 85de848e966e728bea95908d7566900f 670 Gene3D G3DSA:2.40.170.20 178 670 8.3E-87 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00180 85de848e966e728bea95908d7566900f 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 167 2.7E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00180 85de848e966e728bea95908d7566900f 670 Gene3D G3DSA:2.170.130.10 35 174 3.1E-37 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00180 85de848e966e728bea95908d7566900f 670 SUPERFAMILY SSF56935 36 670 3.48E-132 T 28-03-2018 AL504_RS00815 6d629847cfb956434afe36d30ce730ca 204 SUPERFAMILY SSF47616 73 201 9.81E-19 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS00815 6d629847cfb956434afe36d30ce730ca 204 Gene3D G3DSA:1.20.1050.10 95 204 1.5E-14 T 28-03-2018 AL504_RS00815 6d629847cfb956434afe36d30ce730ca 204 SUPERFAMILY SSF52833 1 102 1.74E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS00815 6d629847cfb956434afe36d30ce730ca 204 Gene3D G3DSA:3.40.30.10 1 94 9.3E-18 T 28-03-2018 AL504_RS00815 6d629847cfb956434afe36d30ce730ca 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 5.3E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS15725 199f1660a80545065dc7541fd6ab5485 399 Gene3D G3DSA:1.10.620.20 43 380 2.1E-101 T 28-03-2018 AL504_RS15725 199f1660a80545065dc7541fd6ab5485 399 SUPERFAMILY SSF47240 63 370 4.11E-97 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS15725 199f1660a80545065dc7541fd6ab5485 399 PIRSF PIRSF000355 53 399 4.9E-132 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15725 199f1660a80545065dc7541fd6ab5485 399 Pfam PF00268 Ribonucleotide reductase, small chain 79 366 1.4E-85 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF52777 1724 1978 2.89E-53 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF56801 1969 2542 3.01E-132 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF52777 1267 1516 5.34E-35 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1030 1045 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.30.300.30 2409 2532 2.1E-34 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.30.300.30 892 1011 1.1E-37 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:1.10.1200.10 1012 1073 1.7E-21 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1386 1534 6.1E-30 T 28-03-2018 IPR010060 Non-ribosomal peptide synthase AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.40.50.980 2160 2317 4.8E-29 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.30.559.10 1074 1273 5.9E-29 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF00550 Phosphopantetheine attachment site 2530 2594 2.4E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF00550 Phosphopantetheine attachment site 1009 1069 1.5E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF52777 1081 1253 2.67E-35 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF56801 463 1019 1.44E-155 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF00501 AMP-binding enzyme 2010 2413 1.1E-80 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF00501 AMP-binding enzyme 504 897 7.5E-94 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 ProSitePatterns PS00455 Putative AMP-binding domain signature. 642 653 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SMART SM00823 Phosphopantetheine attachment site 1006 1074 0.0027 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SMART SM00823 Phosphopantetheine attachment site 2529 2598 4.1E-6 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2155 2166 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF52777 37 214 3.11E-50 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF47336 2522 2594 1.44E-19 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.30.559.10 21 223 7.6E-45 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.30.559.10 1525 1732 2.9E-35 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF52777 220 467 1.33E-46 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.40.50.980 644 800 3.7E-48 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.40.50.980 496 643 8.7E-42 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:3.40.50.980 2006 2159 1.8E-36 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF13193 AMP-binding enzyme C-terminal domain 905 981 7.1E-11 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF13193 AMP-binding enzyme C-terminal domain 2422 2503 6.6E-8 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF47336 1000 1068 1.31E-17 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 SUPERFAMILY SSF52777 1539 1739 3.78E-40 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF00668 Condensation domain 33 483 1.9E-83 T 28-03-2018 IPR001242 Condensation domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF00668 Condensation domain 1084 1508 1.0E-52 T 28-03-2018 IPR001242 Condensation domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Pfam PF00668 Condensation domain 1541 1985 1.2E-82 T 28-03-2018 IPR001242 Condensation domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:2.30.38.10 2322 2404 8.3E-21 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:2.30.38.10 807 887 5.2E-21 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2553 2568 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 Gene3D G3DSA:1.10.1200.10 2533 2607 5.0E-24 T 28-03-2018 AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2032 2437 1.2E-118 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03220 7755b2247cbc874fe4237eaf9d8ed7de 2621 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 524 921 6.2E-129 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS28205 e53eacfcd8da146ced7fdf389921c084 221 Pfam PF00005 ABC transporter 25 144 8.9E-7 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28205 e53eacfcd8da146ced7fdf389921c084 221 Gene3D G3DSA:3.40.50.300 21 217 2.6E-31 T 28-03-2018 AL504_RS28205 e53eacfcd8da146ced7fdf389921c084 221 SUPERFAMILY SSF52540 26 206 1.38E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07810 5b594ce36aca32c1a39fef4e3ac3edb5 108 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 32 103 2.9E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS07810 5b594ce36aca32c1a39fef4e3ac3edb5 108 SUPERFAMILY SSF46626 6 107 1.3E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS07810 5b594ce36aca32c1a39fef4e3ac3edb5 108 PRINTS PR00607 Class IE cytochrome C signature 79 91 3.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS07810 5b594ce36aca32c1a39fef4e3ac3edb5 108 PRINTS PR00607 Class IE cytochrome C signature 51 61 3.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS07810 5b594ce36aca32c1a39fef4e3ac3edb5 108 PRINTS PR00607 Class IE cytochrome C signature 93 104 3.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS07810 5b594ce36aca32c1a39fef4e3ac3edb5 108 PRINTS PR00607 Class IE cytochrome C signature 40 51 3.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS07810 5b594ce36aca32c1a39fef4e3ac3edb5 108 Gene3D G3DSA:1.10.760.10 27 108 4.2E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS23220 2f72d7d098e1e7e97993ebbdd744e078 439 Gene3D G3DSA:2.30.30.230 15 126 2.1E-28 T 28-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AL504_RS23220 2f72d7d098e1e7e97993ebbdd744e078 439 Gene3D G3DSA:3.90.850.10 129 422 2.9E-80 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS23220 2f72d7d098e1e7e97993ebbdd744e078 439 SUPERFAMILY SSF56529 133 437 1.7E-89 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS23220 2f72d7d098e1e7e97993ebbdd744e078 439 SUPERFAMILY SSF63433 14 131 2.35E-30 T 28-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AL504_RS23220 2f72d7d098e1e7e97993ebbdd744e078 439 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 137 434 3.3E-51 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS23220 2f72d7d098e1e7e97993ebbdd744e078 439 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 15 437 4.9E-158 T 28-03-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AL504_RS23220 2f72d7d098e1e7e97993ebbdd744e078 439 Pfam PF09298 Fumarylacetoacetase N-terminal 30 131 3.5E-22 T 28-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 SUPERFAMILY SSF53955 52 272 9.0E-61 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 52 647 3.1E-229 T 28-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 Pfam PF00912 Transglycosylase 70 241 9.4E-46 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 Gene3D G3DSA:1.10.3810.10 52 258 4.1E-55 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 Gene3D G3DSA:3.40.710.10 271 637 4.0E-67 T 28-03-2018 AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 649 733 1.3E-16 T 28-03-2018 IPR009647 Penicillin-binding, C-terminal AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 Pfam PF00905 Penicillin binding protein transpeptidase domain 328 565 3.2E-17 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL504_RS30455 eaa2057b734d11a92577eddef20a9c9d 740 SUPERFAMILY SSF56601 223 651 6.84E-95 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS09380 fe52de621639acb6409a1807953eda40 498 SUPERFAMILY SSF53720 19 496 1.07E-171 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS09380 fe52de621639acb6409a1807953eda40 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 298 309 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS09380 fe52de621639acb6409a1807953eda40 498 Gene3D G3DSA:3.40.309.10 287 480 5.1E-75 T 28-03-2018 AL504_RS09380 fe52de621639acb6409a1807953eda40 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 270 277 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS09380 fe52de621639acb6409a1807953eda40 498 Gene3D G3DSA:3.40.605.10 10 286 4.9E-102 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS09380 fe52de621639acb6409a1807953eda40 498 Pfam PF00171 Aldehyde dehydrogenase family 31 494 1.0E-176 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS00510 145f2bb2fcd2dcd9404780c4b81eb1c2 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 324 3.1E-76 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS00510 145f2bb2fcd2dcd9404780c4b81eb1c2 343 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 276 4.5E-61 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS00510 145f2bb2fcd2dcd9404780c4b81eb1c2 343 SUPERFAMILY SSF53850 74 125 1.41E-5 T 28-03-2018 AL504_RS00510 145f2bb2fcd2dcd9404780c4b81eb1c2 343 SUPERFAMILY SSF53850 158 212 1.41E-5 T 28-03-2018 AL504_RS00510 145f2bb2fcd2dcd9404780c4b81eb1c2 343 Gene3D G3DSA:3.40.190.10 21 215 0.0014 T 28-03-2018 AL504_RS00510 145f2bb2fcd2dcd9404780c4b81eb1c2 343 PIRSF PIRSF006470 1 340 6.3E-87 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS26810 a3577e20bb6d07a8126bf3358c2ec062 288 Gene3D G3DSA:3.40.190.10 88 172 6.4E-13 T 28-03-2018 AL504_RS26810 a3577e20bb6d07a8126bf3358c2ec062 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.9E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26810 a3577e20bb6d07a8126bf3358c2ec062 288 Gene3D G3DSA:3.40.190.10 173 254 7.4E-11 T 28-03-2018 AL504_RS26810 a3577e20bb6d07a8126bf3358c2ec062 288 Gene3D G3DSA:1.10.10.10 1 83 4.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26810 a3577e20bb6d07a8126bf3358c2ec062 288 SUPERFAMILY SSF53850 89 286 6.33E-38 T 28-03-2018 AL504_RS26810 a3577e20bb6d07a8126bf3358c2ec062 288 SUPERFAMILY SSF46785 1 110 1.68E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26810 a3577e20bb6d07a8126bf3358c2ec062 288 Pfam PF03466 LysR substrate binding domain 88 285 1.9E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 PIRSF PIRSF002144 1 91 6.0E-34 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 SUPERFAMILY SSF54570 2 84 1.83E-36 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 Gene3D G3DSA:3.30.860.10 1 91 1.2E-41 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.7E-46 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.976 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-37 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.6E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.6E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19720 4940cfa76f79a52700673051b99ce02d 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.6E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 Gene3D G3DSA:1.10.10.10 1 85 1.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 Gene3D G3DSA:3.40.190.10 183 259 4.7E-14 T 28-03-2018 AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 Pfam PF03466 LysR substrate binding domain 93 280 1.6E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 SUPERFAMILY SSF53850 94 283 1.86E-27 T 28-03-2018 AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 65 1.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 SUPERFAMILY SSF46785 1 111 1.41E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26780 09f49626b2cfc294e6b05f2cc3489e8d 295 Gene3D G3DSA:3.40.190.10 86 182 1.4E-12 T 28-03-2018 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Pfam PF02810 SEC-C motif 891 909 1.8E-10 T 28-03-2018 IPR004027 SEC-C motif AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Pfam PF07517 SecA DEAD-like domain 5 402 5.2E-129 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SUPERFAMILY SSF81767 226 368 1.31E-40 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 ProSitePatterns PS01312 SecA family signature. 500 515 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SMART SM00957 5 402 1.9E-299 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Pfam PF01043 SecA preprotein cross-linking domain 232 358 5.3E-34 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Gene3D G3DSA:3.40.50.300 417 640 5.2E-58 T 28-03-2018 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SUPERFAMILY SSF81886 887 899 6.54E-81 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SUPERFAMILY SSF81886 628 847 6.54E-81 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 PRINTS PR00906 SecA protein signature 100 114 2.5E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 PRINTS PR00906 SecA protein signature 116 126 2.5E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 PRINTS PR00906 SecA protein signature 413 426 2.5E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 PRINTS PR00906 SecA protein signature 169 189 2.5E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 PRINTS PR00906 SecA protein signature 339 361 2.5E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 PRINTS PR00906 SecA protein signature 62 86 2.5E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 PRINTS PR00906 SecA protein signature 376 393 2.5E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Pfam PF07516 SecA Wing and Scaffold domain 624 836 1.4E-66 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SUPERFAMILY SSF52540 416 625 1.56E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Gene3D G3DSA:3.10.450.50 739 911 6.8E-53 T 28-03-2018 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SMART SM00958 227 358 7.9E-72 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 825 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Gene3D G3DSA:3.40.50.300 8 258 7.5E-53 T 28-03-2018 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Gene3D G3DSA:3.40.50.300 303 416 1.0E-8 T 28-03-2018 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Gene3D G3DSA:1.10.3060.10 641 738 1.4E-27 T 28-03-2018 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 839 19.962 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SUPERFAMILY SSF52540 368 415 2.92E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14710 eb1045643be651c060071bf13e2b4085 911 SUPERFAMILY SSF52540 4 227 2.92E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01325 bc8839624d15c29e9ff138f965c8364e 234 Pfam PF13578 Methyltransferase domain 93 192 8.0E-16 T 28-03-2018 AL504_RS01325 bc8839624d15c29e9ff138f965c8364e 234 Gene3D G3DSA:3.40.50.150 63 215 1.8E-27 T 28-03-2018 AL504_RS01325 bc8839624d15c29e9ff138f965c8364e 234 SUPERFAMILY SSF53335 56 210 6.69E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 Pfam PF00462 Glutaredoxin 173 231 1.7E-13 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 Gene3D G3DSA:3.40.30.10 3 148 5.3E-32 T 28-03-2018 AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 Gene3D G3DSA:3.40.30.10 149 183 0.19 T 28-03-2018 AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 Pfam PF08534 Redoxin 6 160 4.2E-34 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.7E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.7E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.7E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 3.3E-37 T 28-03-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 Gene3D G3DSA:3.40.30.10 184 242 2.6E-18 T 28-03-2018 AL504_RS05130 e4fa68bb2b8f8140c072e349fcf52702 242 SUPERFAMILY SSF52833 5 239 2.3E-45 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SMART SM00869 2556 2817 8.5E-37 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 909 1195 7.22E-21 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1550 1578 1.9E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1483 1510 3.9E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1072 1098 1.4E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1686 1714 6.2E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1391 1420 3.5E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 530 553 9.9E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 2124 2153 2.0E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1821 1848 1.2E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 368 392 8.6E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 455 485 5.7E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1004 1032 1.8E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1755 1782 5.5E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 302 327 0.0081 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 842 871 1.9E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 2290 2318 5.0E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 1619 1646 2.0E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 2214 2250 2.9E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Pfam PF12951 Passenger-associated-transport-repeat 932 961 2.2E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 1593 1944 1.48E-26 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 1427 1668 9.1E-18 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 79 416 9.42E-9 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2392 2830 7.0E-67 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Gene3D G3DSA:2.160.20.20 2178 2508 3.1E-34 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Gene3D G3DSA:2.160.20.20 35 398 1.1E-5 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Gene3D G3DSA:2.160.20.20 399 677 0.059 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Gene3D G3DSA:2.160.20.20 881 1058 0.0031 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 Gene3D G3DSA:2.160.20.20 1361 1602 3.6E-5 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 2105 2509 7.85E-43 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 665 987 2.2E-10 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1548 1579 2.9E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1754 1783 4.1E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1070 1098 1.2E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1483 1511 1.7E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1002 1033 7.1E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 842 872 1.6E-11 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 368 392 7.6E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1617 1647 5.7E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2213 2243 9.5E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1821 1848 1.1E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1391 1421 1.2E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 530 556 2.3E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1684 1715 4.6E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2289 2319 2.1E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 932 962 6.1E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2124 2153 2.3E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 454 486 3.6E-11 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 1248 1447 6.91E-7 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 1180 1221 6.91E-7 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF51126 345 677 2.2E-21 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS03740 9dee2ce7e5d049c426f5011ef36a92bc 2830 SUPERFAMILY SSF103515 2532 2830 2.75E-40 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 Gene3D G3DSA:3.40.630.30 169 307 7.3E-17 T 28-03-2018 AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 SUPERFAMILY SSF55729 178 313 5.83E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 Gene3D G3DSA:1.10.10.10 7 168 8.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.1E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.1E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.1E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 SMART SM00347 34 134 1.1E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 Pfam PF12802 MarR family 42 98 2.2E-12 T 28-03-2018 AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 Pfam PF00583 Acetyltransferase (GNAT) family 231 300 2.9E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS24540 8fefa97fcef7b994e1f2c0491cbf35cc 325 SUPERFAMILY SSF46785 13 149 3.08E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 SUPERFAMILY SSF56235 41 467 7.03E-154 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Pfam PF01493 GXGXG motif 1311 1497 1.0E-77 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Pfam PF01645 Conserved region in glutamate synthase 834 1233 1.1E-155 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Gene3D G3DSA:3.20.20.70 817 1286 6.6E-167 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Pfam PF00310 Glutamine amidotransferases class-II 41 464 4.4E-185 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 SUPERFAMILY SSF51395 973 1267 3.38E-260 T 28-03-2018 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 SUPERFAMILY SSF51395 487 943 3.38E-260 T 28-03-2018 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 SUPERFAMILY SSF69336 1280 1568 2.22E-90 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Pfam PF04898 Glutamate synthase central domain 494 773 1.3E-107 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Gene3D G3DSA:3.60.20.10 41 475 4.0E-162 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Gene3D G3DSA:3.20.20.70 476 816 1.1E-90 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS17860 dacace080bb3b8d0f669974f1bcc03c6 1579 Gene3D G3DSA:2.160.20.60 1287 1578 8.2E-109 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL504_RS29005 751209856fc13cec956d8fd3d6048de2 359 Gene3D G3DSA:3.90.1200.10 130 345 2.2E-24 T 28-03-2018 AL504_RS29005 751209856fc13cec956d8fd3d6048de2 359 Pfam PF01636 Phosphotransferase enzyme family 44 279 3.3E-28 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AL504_RS29005 751209856fc13cec956d8fd3d6048de2 359 SUPERFAMILY SSF56112 19 335 1.01E-55 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS29005 751209856fc13cec956d8fd3d6048de2 359 Gene3D G3DSA:3.30.200.20 7 125 4.3E-13 T 28-03-2018 AL504_RS10740 0a4081de70f14a8dce8b2f47d9bf1860 558 SUPERFAMILY SSF103473 461 553 6.63E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS10740 0a4081de70f14a8dce8b2f47d9bf1860 558 SUPERFAMILY SSF103473 18 343 6.63E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS10740 0a4081de70f14a8dce8b2f47d9bf1860 558 Pfam PF00083 Sugar (and other) transporter 27 241 1.0E-28 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS10740 0a4081de70f14a8dce8b2f47d9bf1860 558 Gene3D G3DSA:1.20.1250.20 16 232 2.0E-26 T 28-03-2018 AL504_RS10740 0a4081de70f14a8dce8b2f47d9bf1860 558 Gene3D G3DSA:1.20.1250.20 233 557 1.0E-31 T 28-03-2018 AL504_RS10740 0a4081de70f14a8dce8b2f47d9bf1860 558 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 594 2.9E-22 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 SUPERFAMILY SSF56801 6 628 2.22E-152 T 28-03-2018 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 5 629 0.0 T 28-03-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 Gene3D G3DSA:3.30.300.30 496 608 4.5E-25 T 28-03-2018 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 Gene3D G3DSA:3.40.50.980 243 404 1.1E-32 T 28-03-2018 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 Gene3D G3DSA:3.40.50.980 50 242 9.0E-41 T 28-03-2018 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 5 58 3.6E-20 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 Pfam PF00501 AMP-binding enzyme 62 502 4.0E-75 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS12005 a4b656656db14abbac1e6de48167c1a1 629 Gene3D G3DSA:2.30.38.10 405 495 2.2E-7 T 28-03-2018 AL504_RS22265 5caeab9443e5361bf34f4062f7c4dec9 101 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 94 3.6E-37 T 28-03-2018 IPR014056 Addiction module killer protein, predicted AL504_RS22265 5caeab9443e5361bf34f4062f7c4dec9 101 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 82 8.9E-6 T 28-03-2018 IPR009241 Toxin HigB-like AL504_RS22265 5caeab9443e5361bf34f4062f7c4dec9 101 PIRSF PIRSF028744 1 99 7.4E-37 T 28-03-2018 IPR014056 Addiction module killer protein, predicted AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 SUPERFAMILY SSF160544 244 351 1.16E-42 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 2.1E-126 T 28-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 Gene3D G3DSA:3.40.1690.10 218 353 1.0E-59 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 7.4E-128 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.3E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.3E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.3E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.3E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS06485 660d8d9a9507fa584b23c231f0202dde 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.3E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS17280 081de31be5af3e8e811ba30bf9f178b7 301 Gene3D G3DSA:3.40.50.300 36 270 2.0E-60 T 28-03-2018 AL504_RS17280 081de31be5af3e8e811ba30bf9f178b7 301 SUPERFAMILY SSF52540 38 256 1.78E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17280 081de31be5af3e8e811ba30bf9f178b7 301 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS17280 081de31be5af3e8e811ba30bf9f178b7 301 Pfam PF00005 ABC transporter 53 194 2.5E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17280 081de31be5af3e8e811ba30bf9f178b7 301 SMART SM00382 62 257 2.7E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17645 0fd5677a040ab18881e18cfe78579b6a 435 PIRSF PIRSF000337 2 435 1.4E-124 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AL504_RS17645 0fd5677a040ab18881e18cfe78579b6a 435 SUPERFAMILY SSF51679 5 434 3.53E-92 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS17645 0fd5677a040ab18881e18cfe78579b6a 435 Pfam PF00296 Luciferase-like monooxygenase 22 386 1.7E-48 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS17645 0fd5677a040ab18881e18cfe78579b6a 435 Gene3D G3DSA:3.20.20.30 2 435 3.5E-76 T 28-03-2018 AL504_RS17645 0fd5677a040ab18881e18cfe78579b6a 435 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 17 427 3.3E-107 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 Gene3D G3DSA:3.90.230.10 1 260 1.1E-77 T 28-03-2018 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 253 1.1E-89 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 9.7E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 9.7E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 9.7E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 9.7E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 SUPERFAMILY SSF55920 3 255 1.18E-82 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 Pfam PF00557 Metallopeptidase family M24 11 245 7.8E-49 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS06205 b7c40b5b62c6a24c3879c9ede924c855 273 Hamap MF_01974 Methionine aminopeptidase [map]. 2 254 38.805 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS26790 22b92217a355bd2d9b3eed6476b384ee 90 SUPERFAMILY SSF55729 1 89 1.35E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS26790 22b92217a355bd2d9b3eed6476b384ee 90 Gene3D G3DSA:3.40.630.30 1 90 5.9E-18 T 28-03-2018 AL504_RS26790 22b92217a355bd2d9b3eed6476b384ee 90 Pfam PF14542 GCN5-related N-acetyl-transferase 12 88 3.9E-26 T 28-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AL504_RS22015 b3b3b0a3abb698dfb0ab63fae5a9ec1d 354 Gene3D G3DSA:3.40.190.10 89 176 3.6E-11 T 28-03-2018 AL504_RS22015 b3b3b0a3abb698dfb0ab63fae5a9ec1d 354 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22015 b3b3b0a3abb698dfb0ab63fae5a9ec1d 354 Gene3D G3DSA:3.40.190.10 177 265 4.3E-25 T 28-03-2018 AL504_RS22015 b3b3b0a3abb698dfb0ab63fae5a9ec1d 354 Gene3D G3DSA:1.10.10.10 3 83 1.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22015 b3b3b0a3abb698dfb0ab63fae5a9ec1d 354 SUPERFAMILY SSF46785 4 84 1.31E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22015 b3b3b0a3abb698dfb0ab63fae5a9ec1d 354 Pfam PF03466 LysR substrate binding domain 90 294 1.4E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22015 b3b3b0a3abb698dfb0ab63fae5a9ec1d 354 SUPERFAMILY SSF53850 90 297 1.61E-43 T 28-03-2018 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 PIRSF PIRSF000732 1 559 3.6E-197 T 28-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 223 1.7E-21 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 444 462 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 Gene3D G3DSA:3.50.30.10 131 252 1.1E-27 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 SUPERFAMILY SSF47831 18 137 9.68E-30 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 182 193 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 249 538 1.2E-105 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 SUPERFAMILY SSF51621 248 542 6.81E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 Pfam PF05524 PEP-utilising enzyme, N-terminal 1 120 7.4E-24 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 SUPERFAMILY SSF52009 119 244 1.19E-31 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 Gene3D G3DSA:3.20.20.60 253 561 6.1E-88 T 28-03-2018 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 Gene3D G3DSA:1.10.274.10 18 130 2.0E-31 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 1 549 7.3E-152 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 444 459 1.5E-25 T 28-03-2018 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 461 476 1.5E-25 T 28-03-2018 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 497 509 1.5E-25 T 28-03-2018 AL504_RS08390 c7953381945ec12c03b249b80f0aa34d 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 291 310 1.5E-25 T 28-03-2018 AL504_RS25980 9a17e9300479bf05e4819dee0aefe0b6 238 SUPERFAMILY SSF52540 6 230 8.54E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25980 9a17e9300479bf05e4819dee0aefe0b6 238 Gene3D G3DSA:3.40.50.300 4 234 5.0E-48 T 28-03-2018 AL504_RS25980 9a17e9300479bf05e4819dee0aefe0b6 238 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS25980 9a17e9300479bf05e4819dee0aefe0b6 238 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 7 228 2.3E-98 T 28-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25980 9a17e9300479bf05e4819dee0aefe0b6 238 SMART SM00382 39 231 1.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS25980 9a17e9300479bf05e4819dee0aefe0b6 238 Pfam PF00005 ABC transporter 30 184 1.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 Gene3D G3DSA:3.40.190.10 91 181 1.8E-20 T 28-03-2018 AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 Gene3D G3DSA:3.40.190.10 182 272 4.1E-18 T 28-03-2018 AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 Gene3D G3DSA:1.10.10.10 1 83 1.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 Pfam PF03466 LysR substrate binding domain 90 297 1.1E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 SUPERFAMILY SSF53850 92 303 4.58E-37 T 28-03-2018 AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 SUPERFAMILY SSF46785 13 112 8.71E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12020 ca43d5c4d005d9ef73fd8a9bc04ddee4 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.3E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 Gene3D G3DSA:3.90.226.10 181 457 1.8E-63 T 28-03-2018 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 52 380 6.4E-95 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 SUPERFAMILY SSF50156 89 183 5.11E-20 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 Pfam PF13180 PDZ domain 100 176 4.0E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 SMART SM00228 100 171 3.7E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 Gene3D G3DSA:3.30.750.44 40 99 1.2E-15 T 28-03-2018 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 Pfam PF03572 Peptidase family S41 199 377 1.2E-51 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 Gene3D G3DSA:2.30.42.10 100 180 6.4E-17 T 28-03-2018 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 SMART SM00245 173 378 1.4E-58 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 SUPERFAMILY SSF52096 192 386 6.63E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS21395 c21608b13705ed4e2f695203f6f1e41d 481 SUPERFAMILY SSF52096 39 118 6.63E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS23980 36d673c51df1530fbacc5e973ba433fd 163 Gene3D G3DSA:1.10.10.10 75 163 5.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23980 36d673c51df1530fbacc5e973ba433fd 163 Pfam PF04542 Sigma-70 region 2 10 74 1.1E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23980 36d673c51df1530fbacc5e973ba433fd 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 153 4.1E-22 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23980 36d673c51df1530fbacc5e973ba433fd 163 SUPERFAMILY SSF88659 99 161 4.45E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23980 36d673c51df1530fbacc5e973ba433fd 163 Gene3D G3DSA:1.10.1740.10 3 74 2.4E-15 T 28-03-2018 AL504_RS23980 36d673c51df1530fbacc5e973ba433fd 163 SUPERFAMILY SSF88946 7 93 5.49E-15 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23980 36d673c51df1530fbacc5e973ba433fd 163 Pfam PF08281 Sigma-70, region 4 104 154 2.9E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17265 ee11a9d1135e3d18d2dd8b8825e2d325 290 Gene3D G3DSA:3.10.450.50 38 138 7.8E-4 T 28-03-2018 AL504_RS17265 ee11a9d1135e3d18d2dd8b8825e2d325 290 Pfam PF11453 Protein of unknown function (DUF2950) 33 271 6.3E-64 T 28-03-2018 IPR021556 Protein of unknown function DUF2950 AL504_RS07925 6232c036b1ff344c645df17836633685 220 SUPERFAMILY SSF52218 8 209 7.9E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS07925 6232c036b1ff344c645df17836633685 220 Pfam PF02525 Flavodoxin-like fold 8 166 3.6E-19 T 28-03-2018 IPR003680 Flavodoxin-like fold AL504_RS07925 6232c036b1ff344c645df17836633685 220 Gene3D G3DSA:3.40.50.360 4 199 6.6E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS24070 c1d64bd99941e2d09ba2294d7ba90636 368 Pfam PF01593 Flavin containing amine oxidoreductase 106 349 2.9E-21 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL504_RS24070 c1d64bd99941e2d09ba2294d7ba90636 368 Gene3D G3DSA:3.90.660.10 137 297 3.2E-25 T 28-03-2018 AL504_RS24070 c1d64bd99941e2d09ba2294d7ba90636 368 SUPERFAMILY SSF51905 1 216 4.19E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24070 c1d64bd99941e2d09ba2294d7ba90636 368 SUPERFAMILY SSF51905 311 352 4.19E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24070 c1d64bd99941e2d09ba2294d7ba90636 368 Gene3D G3DSA:3.40.50.720 6 136 3.0E-16 T 28-03-2018 AL504_RS24070 c1d64bd99941e2d09ba2294d7ba90636 368 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 73 8.9E-13 T 28-03-2018 AL504_RS24070 c1d64bd99941e2d09ba2294d7ba90636 368 SUPERFAMILY SSF54373 197 295 5.1E-23 T 28-03-2018 AL504_RS20035 ba39f5ae2407dc2a479e543bf5fec41e 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.876 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20035 ba39f5ae2407dc2a479e543bf5fec41e 130 Pfam PF01196 Ribosomal protein L17 20 116 5.6E-35 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20035 ba39f5ae2407dc2a479e543bf5fec41e 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20035 ba39f5ae2407dc2a479e543bf5fec41e 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.7E-46 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20035 ba39f5ae2407dc2a479e543bf5fec41e 130 SUPERFAMILY SSF64263 1 119 3.92E-50 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20035 ba39f5ae2407dc2a479e543bf5fec41e 130 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-49 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS05860 58f46fd38c784f4f39cb3944d5a5c480 202 SMART SM00464 3 199 6.5E-6 T 28-03-2018 IPR003111 Lon, substrate-binding domain AL504_RS05860 58f46fd38c784f4f39cb3944d5a5c480 202 Gene3D G3DSA:2.30.130.40 1 114 3.6E-22 T 28-03-2018 AL504_RS05860 58f46fd38c784f4f39cb3944d5a5c480 202 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 194 4.8E-16 T 28-03-2018 IPR003111 Lon, substrate-binding domain AL504_RS05860 58f46fd38c784f4f39cb3944d5a5c480 202 SUPERFAMILY SSF88697 3 198 2.34E-46 T 28-03-2018 IPR015947 PUA-like domain AL504_RS05860 58f46fd38c784f4f39cb3944d5a5c480 202 Gene3D G3DSA:1.10.4060.10 118 200 2.1E-15 T 28-03-2018 AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 64 1.5E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 Gene3D G3DSA:3.90.1150.10 375 475 1.1E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 SMART SM00345 5 64 1.1E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 Gene3D G3DSA:3.40.640.10 127 374 2.7E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 SUPERFAMILY SSF46785 4 68 2.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 Gene3D G3DSA:1.10.10.10 1 66 3.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 Pfam PF00155 Aminotransferase class I and II 142 436 4.8E-23 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS28525 ba0e3dc5f8474eb386b1424364e3a3b3 489 SUPERFAMILY SSF53383 111 472 1.15E-82 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 PIRSF PIRSF000116 201 331 4.3E-12 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 PIRSF PIRSF000116 2 204 6.8E-46 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 Gene3D G3DSA:1.10.1040.10 72 330 3.6E-110 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.275 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 7.1E-134 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 5.4E-63 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 4.6E-74 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 SUPERFAMILY SSF51735 1 182 4.35E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 SUPERFAMILY SSF48179 183 332 4.59E-68 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS13135 87d5292714f33032bd0a088fa1e9be45 338 Gene3D G3DSA:3.40.50.720 5 71 9.2E-4 T 28-03-2018 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 439 452 4.1E-24 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 304 326 4.1E-24 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 362 376 4.1E-24 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 377 391 4.1E-24 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 74 93 4.1E-24 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 47 481 7.7E-82 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 Gene3D G3DSA:3.40.710.10 38 480 1.5E-36 T 28-03-2018 AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 SUPERFAMILY SSF56601 32 481 7.27E-90 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS25665 f13f7a0e9172f26a6c535d6b3ea8b384 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 70 461 9.4E-61 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS06565 2784538936738165353641bbd8ea7350 560 SUPERFAMILY SSF64518 284 560 9.55E-36 T 28-03-2018 AL504_RS06565 2784538936738165353641bbd8ea7350 560 SUPERFAMILY SSF64518 1 326 1.11E-65 T 28-03-2018 AL504_RS06565 2784538936738165353641bbd8ea7350 560 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.4E-43 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL504_RS06565 2784538936738165353641bbd8ea7350 560 Gene3D G3DSA:1.20.1330.10 40 532 4.9E-56 T 28-03-2018 AL504_RS06565 2784538936738165353641bbd8ea7350 560 Pfam PF00700 Bacterial flagellin C-terminal helical region 475 559 3.7E-29 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL504_RS06565 2784538936738165353641bbd8ea7350 560 Pfam PF12445 Flagellin protein 334 465 7.4E-13 T 28-03-2018 IPR032826 Flagellin, H7-serospecific domain AL504_RS06565 2784538936738165353641bbd8ea7350 560 PRINTS PR00207 Flagellin signature 111 134 7.2E-28 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL504_RS06565 2784538936738165353641bbd8ea7350 560 PRINTS PR00207 Flagellin signature 76 95 7.2E-28 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL504_RS06565 2784538936738165353641bbd8ea7350 560 PRINTS PR00207 Flagellin signature 37 54 7.2E-28 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 SUPERFAMILY SSF89000 389 439 7.45E-15 T 28-03-2018 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 Gene3D G3DSA:3.20.20.70 10 377 3.8E-111 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 555 53.741 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 244 257 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 SMART SM00917 423 554 2.9E-32 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 Pfam PF00682 HMGL-like 34 312 1.9E-78 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 SUPERFAMILY SSF110921 449 553 1.96E-33 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 41 57 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 Pfam PF08502 LeuA allosteric (dimerisation) domain 423 552 2.9E-29 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 SUPERFAMILY SSF51569 23 331 7.14E-102 T 28-03-2018 AL504_RS18545 aea9cc34fe663668772c06abde62aa05 569 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 554 1.6E-239 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS21730 45461bccdb82281b24c93f7cd0d8ad1e 306 Gene3D G3DSA:1.10.10.10 1 91 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21730 45461bccdb82281b24c93f7cd0d8ad1e 306 SUPERFAMILY SSF46785 6 90 2.06E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21730 45461bccdb82281b24c93f7cd0d8ad1e 306 Pfam PF03466 LysR substrate binding domain 92 297 9.1E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21730 45461bccdb82281b24c93f7cd0d8ad1e 306 SUPERFAMILY SSF53850 87 300 1.36E-30 T 28-03-2018 AL504_RS21730 45461bccdb82281b24c93f7cd0d8ad1e 306 Gene3D G3DSA:3.40.190.10 92 182 6.9E-13 T 28-03-2018 AL504_RS21730 45461bccdb82281b24c93f7cd0d8ad1e 306 Gene3D G3DSA:3.40.190.10 183 272 6.3E-16 T 28-03-2018 AL504_RS21730 45461bccdb82281b24c93f7cd0d8ad1e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16705 0dc33a3df2fbb33a294bb6649f1dec21 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 309 4.5E-33 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS16705 0dc33a3df2fbb33a294bb6649f1dec21 328 Gene3D G3DSA:1.10.3470.10 27 313 9.0E-33 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 SMART SM00490 509 592 2.5E-21 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 SUPERFAMILY SSF52540 185 457 1.61E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 Pfam PF00270 DEAD/DEAH box helicase 293 435 5.8E-16 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 Gene3D G3DSA:2.40.50.140 52 144 4.5E-8 T 28-03-2018 AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 Gene3D G3DSA:3.40.50.300 461 633 2.6E-28 T 28-03-2018 AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 Gene3D G3DSA:3.40.50.300 252 460 3.9E-33 T 28-03-2018 AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 SMART SM00487 267 463 1.9E-28 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 SUPERFAMILY SSF50249 25 174 9.59E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 38 668 1.8E-215 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 SUPERFAMILY SSF52540 456 657 5.44E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 Pfam PF17191 RecG wedge domain 25 171 4.9E-14 T 28-03-2018 IPR033454 RecG, wedge domain AL504_RS04715 6696cc5fcaa07f9a38a5ebf98d75b406 696 Pfam PF00271 Helicase conserved C-terminal domain 484 591 5.9E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS21840 db6b59e4808a066db93c8e7fa6bf5c78 229 SUPERFAMILY SSF100950 2 220 3.29E-78 T 28-03-2018 AL504_RS21840 db6b59e4808a066db93c8e7fa6bf5c78 229 Gene3D G3DSA:3.40.1080.10 2 229 1.4E-80 T 28-03-2018 AL504_RS21840 db6b59e4808a066db93c8e7fa6bf5c78 229 Pfam PF01144 Coenzyme A transferase 7 218 1.8E-70 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS21840 db6b59e4808a066db93c8e7fa6bf5c78 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS21840 db6b59e4808a066db93c8e7fa6bf5c78 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 1.8E-114 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AL504_RS21840 db6b59e4808a066db93c8e7fa6bf5c78 229 SMART SM00882 6 219 2.2E-84 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 SUPERFAMILY SSF52172 2 124 1.42E-26 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 SUPERFAMILY SSF46894 137 227 6.8E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 6.3E-14 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 SMART SM00448 1 114 7.6E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 Gene3D G3DSA:1.10.10.10 126 233 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 Gene3D G3DSA:3.40.50.2300 1 125 2.5E-22 T 28-03-2018 AL504_RS04445 322f3153616cec3d1495a807a50ee366 239 SMART SM00862 149 227 1.4E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS17385 f26a2d2bd386e7ac425c0426589a4029 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS17385 f26a2d2bd386e7ac425c0426589a4029 486 Gene3D G3DSA:3.40.309.10 268 455 6.2E-64 T 28-03-2018 AL504_RS17385 f26a2d2bd386e7ac425c0426589a4029 486 SUPERFAMILY SSF53720 10 484 1.31E-155 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS17385 f26a2d2bd386e7ac425c0426589a4029 486 Pfam PF00171 Aldehyde dehydrogenase family 17 482 8.4E-164 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS17385 f26a2d2bd386e7ac425c0426589a4029 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS17385 f26a2d2bd386e7ac425c0426589a4029 486 Gene3D G3DSA:3.40.605.10 2 267 5.2E-93 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1681 1719 2.4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1586 1624 1.4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1947 1978 0.012 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1204 1242 0.29 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1418 1444 3.0E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1525 1565 8.7E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 947 983 2.0 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1486 1521 0.004 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2289 2327 0.042 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1225 1262 0.041 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1294 1328 0.36 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1336 1362 2.9 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1458 1485 0.056 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2269 2308 0.0055 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 375 409 2.6 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1351 1391 1.1E-5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 58 343 1.8E-61 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 981 1058 6.0E-5 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 1409 1445 0.27 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 1588 1639 0.067 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 344 412 0.11 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 1059 1132 0.0063 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 1447 1517 1.6E-4 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 713 849 0.086 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 1518 1587 6.0E-5 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 1256 1408 1.9E-5 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 2030 2325 1.5E-8 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Gene3D G3DSA:2.160.20.10 519 624 0.12 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 SUPERFAMILY SSF51126 67 335 2.95E-59 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Pfam PF13332 Haemagluttinin repeat 2429 2483 2.6E-6 T 28-03-2018 IPR025157 Hemagglutinin repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Pfam PF13332 Haemagluttinin repeat 2741 2913 3.1E-39 T 28-03-2018 IPR025157 Hemagglutinin repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Pfam PF13332 Haemagluttinin repeat 2306 2354 0.0052 T 28-03-2018 IPR025157 Hemagglutinin repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Pfam PF13332 Haemagluttinin repeat 2514 2649 1.2E-5 T 28-03-2018 IPR025157 Hemagglutinin repeat AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 Pfam PF05860 haemagglutination activity domain 66 183 1.6E-32 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 86 182 1.9E-22 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS18835 c045f7f57e56896c2c035201bd22675e 3615 SMART SM00912 67 187 2.2E-40 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 PIRSF PIRSF036298 1 299 2.6E-153 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 SUPERFAMILY SSF54862 29 281 1.78E-72 T 28-03-2018 AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 2.3E-22 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 Gene3D G3DSA:3.30.70.20 19 41 0.0021 T 28-03-2018 AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 Gene3D G3DSA:3.30.70.20 114 155 1.3E-16 T 28-03-2018 AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 Gene3D G3DSA:3.30.70.20 42 113 1.4E-21 T 28-03-2018 AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 Gene3D G3DSA:1.20.5.480 249 291 1.3E-21 T 28-03-2018 AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 1.4E-141 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 Pfam PF13247 4Fe-4S dicluster domain 92 188 9.8E-24 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS17225 546a0bbc54b0a99697af1157e0541d2d 299 Gene3D G3DSA:3.30.70.20 156 205 1.7E-5 T 28-03-2018 AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 SUPERFAMILY SSF52172 1 177 3.32E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 1.0E-100 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 5.3E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 SMART SM00862 144 219 1.6E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 Gene3D G3DSA:1.10.10.10 124 225 9.9E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 Gene3D G3DSA:3.40.50.2300 1 123 2.2E-33 T 28-03-2018 AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 SMART SM00448 1 111 2.3E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS16485 92a55de68d9cbb80d4a36cf6d227d13d 228 Pfam PF00072 Response regulator receiver domain 3 112 3.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 SUPERFAMILY SSF55874 325 502 8.51E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 497 7.5E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Gene3D G3DSA:3.40.50.2300 626 749 4.8E-36 T 28-03-2018 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 335 8.4E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 SMART SM00448 631 742 3.8E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 SUPERFAMILY SSF52172 631 745 1.21E-33 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Gene3D G3DSA:1.10.287.130 261 329 4.0E-17 T 28-03-2018 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 SMART SM00387 382 499 1.6E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Pfam PF00072 Response regulator receiver domain 633 738 4.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Gene3D G3DSA:3.30.565.10 330 499 2.7E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 5.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 5.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 452 5.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 5.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Gene3D G3DSA:3.30.450.20 147 201 0.038 T 28-03-2018 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 Gene3D G3DSA:3.30.450.20 202 260 9.9E-4 T 28-03-2018 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 SUPERFAMILY SSF47384 255 336 3.92E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS28175 45444d2dec1c460ee900a76798f155ec 750 SMART SM00388 270 335 9.0E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS21015 f48573f2464640e0aea828a901aac28e 318 Pfam PF01548 Transposase 8 140 5.5E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL504_RS21015 f48573f2464640e0aea828a901aac28e 318 Gene3D G3DSA:3.40.50.10730 5 166 4.0E-4 T 28-03-2018 AL504_RS21015 f48573f2464640e0aea828a901aac28e 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 273 2.8E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL504_RS15875 f48573f2464640e0aea828a901aac28e 318 Pfam PF01548 Transposase 8 140 5.5E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL504_RS15875 f48573f2464640e0aea828a901aac28e 318 Gene3D G3DSA:3.40.50.10730 5 166 4.0E-4 T 28-03-2018 AL504_RS15875 f48573f2464640e0aea828a901aac28e 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 273 2.8E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL504_RS06770 b50e0a682a82206c22242cc5bb19cdb9 507 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 425 1.3E-81 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS06770 b50e0a682a82206c22242cc5bb19cdb9 507 Gene3D G3DSA:3.10.105.10 277 477 1.0E-54 T 28-03-2018 AL504_RS06770 b50e0a682a82206c22242cc5bb19cdb9 507 Gene3D G3DSA:3.40.190.10 179 276 2.4E-23 T 28-03-2018 AL504_RS06770 b50e0a682a82206c22242cc5bb19cdb9 507 Gene3D G3DSA:3.90.76.10 35 178 7.2E-28 T 28-03-2018 AL504_RS06770 b50e0a682a82206c22242cc5bb19cdb9 507 SUPERFAMILY SSF53850 26 504 5.79E-130 T 28-03-2018 AL504_RS06770 b50e0a682a82206c22242cc5bb19cdb9 507 PIRSF PIRSF002741 18 506 3.7E-104 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS13250 e4cda93d97257720e115e207e2eab83a 289 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 63 1.3E-7 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS13250 e4cda93d97257720e115e207e2eab83a 289 SUPERFAMILY SSF161098 81 286 2.35E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13250 e4cda93d97257720e115e207e2eab83a 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 287 7.3E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13250 e4cda93d97257720e115e207e2eab83a 289 Gene3D G3DSA:1.10.3720.10 25 287 5.0E-40 T 28-03-2018 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Pfam PF01619 Proline dehydrogenase 265 561 3.7E-98 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Gene3D G3DSA:1.10.1220.10 2 48 9.0E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 SUPERFAMILY SSF51730 255 604 1.06E-120 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 PIRSF PIRSF000197 73 1273 0.0 T 28-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 SUPERFAMILY SSF53720 648 1104 3.93E-127 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Gene3D G3DSA:3.40.605.10 641 897 1.2E-73 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 608 1103 7.5E-232 T 28-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 906 917 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Pfam PF00171 Aldehyde dehydrogenase family 655 1097 1.7E-117 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Gene3D G3DSA:1.20.5.550 88 134 3.1E-17 T 28-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Gene3D G3DSA:3.20.20.220 172 594 1.4E-104 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 SUPERFAMILY SSF47598 4 45 8.67E-8 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 SUPERFAMILY SSF81935 87 253 1.7E-62 T 28-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 141 252 1.1E-46 T 28-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL504_RS30480 631421ee0e624f13c230dd45af12b6e3 1273 Gene3D G3DSA:3.40.309.10 898 1081 1.7E-45 T 28-03-2018 AL504_RS06880 eaa115ae1f0a38580f902040b025fc2d 443 Gene3D G3DSA:2.30.30.60 202 252 1.8E-10 T 28-03-2018 AL504_RS06880 eaa115ae1f0a38580f902040b025fc2d 443 Pfam PF00924 Mechanosensitive ion channel 146 397 3.7E-43 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL504_RS06880 eaa115ae1f0a38580f902040b025fc2d 443 SUPERFAMILY SSF50182 185 252 1.08E-10 T 28-03-2018 IPR010920 LSM domain AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 Pfam PF00563 EAL domain 245 474 4.8E-70 T 28-03-2018 IPR001633 EAL domain AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 SUPERFAMILY SSF141868 241 483 4.84E-83 T 28-03-2018 IPR001633 EAL domain AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 94 217 2.0E-11 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 SMART SM00052 234 479 8.3E-102 T 28-03-2018 IPR001633 EAL domain AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 Gene3D G3DSA:3.30.70.270 30 231 4.4E-24 T 28-03-2018 AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 SUPERFAMILY SSF55073 94 225 7.61E-15 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 SMART SM00267 49 224 2.5E-4 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08625 3c58e7b848058f7bb419fdd996801947 488 Gene3D G3DSA:3.20.20.450 232 488 6.6E-92 T 28-03-2018 IPR001633 EAL domain AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 308 406 1.6E-18 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 280 3.1E-24 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 2.7E-32 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 PIRSF PIRSF000124 1 414 1.9E-47 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 Gene3D G3DSA:3.40.50.720 215 417 9.4E-52 T 28-03-2018 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 SUPERFAMILY SSF51735 1 183 2.16E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 SUPERFAMILY SSF52413 302 409 2.62E-20 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 401 1.5E-112 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 Gene3D G3DSA:1.20.5.170 191 214 5.6E-13 T 28-03-2018 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 SUPERFAMILY SSF48179 191 281 2.89E-24 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 Gene3D G3DSA:3.40.50.720 1 188 1.8E-33 T 28-03-2018 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 SMART SM00984 307 407 5.9E-20 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS04700 e646f5cef6e0213be09267b1df59e398 419 PIRSF PIRSF500136 1 418 8.9E-138 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 SUPERFAMILY SSF52317 12 204 4.58E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 SUPERFAMILY SSF46689 221 268 1.21E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 Pfam PF01965 DJ-1/PfpI family 15 184 3.0E-18 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 SMART SM00342 238 321 2.8E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 SUPERFAMILY SSF46689 274 323 3.63E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 Gene3D G3DSA:3.40.50.880 9 220 3.6E-54 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 Gene3D G3DSA:1.10.10.60 275 328 6.0E-6 T 28-03-2018 AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 Gene3D G3DSA:1.10.10.60 221 274 1.5E-11 T 28-03-2018 AL504_RS07650 16e90f883aebe7f6af8aa95adf62b77c 332 Pfam PF12833 Helix-turn-helix domain 244 322 1.4E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 PIRSF PIRSF016578 9 367 3.7E-19 T 28-03-2018 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 117 3.7E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 Gene3D G3DSA:1.10.540.10 2 119 3.4E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 SUPERFAMILY SSF56645 5 242 8.51E-73 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 SUPERFAMILY SSF47203 227 379 4.35E-56 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 8.5E-28 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 5.8E-49 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 Gene3D G3DSA:2.40.110.10 120 216 1.3E-36 T 28-03-2018 AL504_RS16770 e063bce4eb29da57bc44d4259daf917e 382 Gene3D G3DSA:1.20.140.10 217 382 1.9E-59 T 28-03-2018 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Pfam PF07678 A-macroglobulin complement component 1270 1347 8.9E-10 T 28-03-2018 IPR011626 Alpha-macroglobulin complement component GO:0005615 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 SMART SM01359 803 947 1.2E-32 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Pfam PF00207 Alpha-2-macroglobulin family 1017 1098 6.5E-13 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Gene3D G3DSA:2.60.40.10 896 1058 0.5 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 PIRSF PIRSF038980 1 1720 0.0 T 28-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1216 1238 2.2E-5 T 28-03-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Gene3D G3DSA:2.60.40.10 344 492 0.0015 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 SMART SM01360 1009 1098 7.9E-29 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Gene3D G3DSA:2.60.40.10 1061 1171 7.6E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Gene3D G3DSA:1.50.10.20 1209 1511 7.8E-29 T 28-03-2018 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Pfam PF01835 MG2 domain 443 540 4.1E-17 T 28-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 804 947 5.8E-13 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 SUPERFAMILY SSF48239 1215 1498 5.49E-43 T 28-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AL504_RS30450 63c90178884ccf29c1f14920aabf7fb5 1726 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 343 436 3.3E-20 T 28-03-2018 AL504_RS09435 49c64f86b5f5d69013b3c43576f71c8c 243 Gene3D G3DSA:3.30.70.980 173 243 4.2E-10 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS09435 49c64f86b5f5d69013b3c43576f71c8c 243 Gene3D G3DSA:3.30.70.980 83 172 1.2E-31 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS09435 49c64f86b5f5d69013b3c43576f71c8c 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.588 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS09435 49c64f86b5f5d69013b3c43576f71c8c 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 3.1E-92 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS09435 49c64f86b5f5d69013b3c43576f71c8c 243 Gene3D G3DSA:1.10.10.200 1 78 1.3E-33 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AL504_RS09435 49c64f86b5f5d69013b3c43576f71c8c 243 SUPERFAMILY SSF75625 3 240 4.19E-95 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS09435 49c64f86b5f5d69013b3c43576f71c8c 243 Pfam PF01709 Transcriptional regulator 5 236 8.0E-96 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 SUPERFAMILY SSF53850 104 308 8.25E-34 T 28-03-2018 AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 SUPERFAMILY SSF46785 14 92 4.23E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 Gene3D G3DSA:1.10.10.10 2 98 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 4.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 Gene3D G3DSA:3.40.190.10 102 188 1.5E-19 T 28-03-2018 AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 Gene3D G3DSA:3.40.190.10 189 278 5.2E-18 T 28-03-2018 AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 Pfam PF03466 LysR substrate binding domain 101 301 3.8E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 2.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 2.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29575 9c41d62e0f492552464e0261c5fa0f2b 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 2.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00195 95a5c4c640a86c55e9ff2108e18fecd9 309 Gene3D G3DSA:1.10.3470.10 1 309 9.5E-41 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS00195 95a5c4c640a86c55e9ff2108e18fecd9 309 Pfam PF01032 FecCD transport family 20 305 1.5E-50 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS00195 95a5c4c640a86c55e9ff2108e18fecd9 309 SUPERFAMILY SSF81345 3 306 5.1E-53 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 Gene3D G3DSA:3.30.300.30 410 513 9.3E-30 T 28-03-2018 AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 SUPERFAMILY SSF56801 6 512 4.32E-142 T 28-03-2018 AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 Gene3D G3DSA:2.30.38.10 317 409 3.4E-27 T 28-03-2018 AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 Gene3D G3DSA:3.40.50.980 2 167 7.1E-35 T 28-03-2018 AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 Gene3D G3DSA:3.40.50.980 168 316 2.7E-46 T 28-03-2018 AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 Pfam PF00501 AMP-binding enzyme 21 416 9.4E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS27005 fd8add589e71ed663442dbcf900d80aa 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 1.9E-18 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 SUPERFAMILY SSF46785 3 71 1.88E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 Gene3D G3DSA:3.40.640.10 104 309 8.9E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.6E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 Gene3D G3DSA:3.90.1150.10 310 440 4.1E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 Gene3D G3DSA:1.10.10.10 1 74 4.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 SMART SM00345 9 68 3.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 Pfam PF00155 Aminotransferase class I and II 90 430 2.5E-30 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS18790 deef430fcabf244085ddaf80854cf871 443 SUPERFAMILY SSF53383 84 438 1.6E-72 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03895 805b20f5a68e329c573c7cb7ce83da6a 380 SUPERFAMILY SSF51905 6 220 2.65E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03895 805b20f5a68e329c573c7cb7ce83da6a 380 SUPERFAMILY SSF51905 313 363 2.65E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03895 805b20f5a68e329c573c7cb7ce83da6a 380 Gene3D G3DSA:3.50.50.60 1 380 9.6E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03895 805b20f5a68e329c573c7cb7ce83da6a 380 Pfam PF01266 FAD dependent oxidoreductase 8 352 1.3E-45 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS28500 fe4bcbcb5a2bb0c24724009a759404c1 315 Gene3D G3DSA:1.10.3130.10 68 189 2.2E-37 T 28-03-2018 AL504_RS28500 fe4bcbcb5a2bb0c24724009a759404c1 315 SUPERFAMILY SSF51161 119 299 4.57E-44 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS28500 fe4bcbcb5a2bb0c24724009a759404c1 315 Gene3D G3DSA:2.160.10.10 190 303 2.2E-27 T 28-03-2018 AL504_RS28500 fe4bcbcb5a2bb0c24724009a759404c1 315 PIRSF PIRSF000441 130 303 4.6E-51 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL504_RS28500 fe4bcbcb5a2bb0c24724009a759404c1 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 257 290 3.5E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 SUPERFAMILY SSF51246 341 456 2.09E-41 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 12 456 3.0E-191 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 SMART SM00878 346 452 3.0E-61 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 Gene3D G3DSA:3.30.470.20 220 455 8.6E-97 T 28-03-2018 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 Pfam PF00289 Biotin carboxylase, N-terminal domain 12 120 2.1E-43 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 SUPERFAMILY SSF52440 9 123 3.74E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 Gene3D G3DSA:3.40.50.20 11 133 4.8E-50 T 28-03-2018 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 163 177 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 125 332 1.6E-74 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 Gene3D G3DSA:3.30.1490.20 134 219 1.4E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 SUPERFAMILY SSF56059 93 360 1.03E-68 T 28-03-2018 AL504_RS17895 46451df3fab69dded8b76d6ccea96d75 462 Pfam PF02785 Biotin carboxylase C-terminal domain 346 452 7.6E-39 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS12595 52f414160f2d680754aa9a0fc08f667c 255 Pfam PF01569 PAP2 superfamily 128 240 2.5E-18 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS12595 52f414160f2d680754aa9a0fc08f667c 255 SMART SM00014 126 238 1.5E-11 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS12595 52f414160f2d680754aa9a0fc08f667c 255 Gene3D G3DSA:1.20.144.10 75 254 2.4E-22 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS12595 52f414160f2d680754aa9a0fc08f667c 255 SUPERFAMILY SSF48317 58 241 2.09E-29 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 Pfam PF00108 Thiolase, N-terminal domain 6 268 3.4E-76 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 4 401 2.6E-219 T 28-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 PIRSF PIRSF000429 1 401 4.2E-133 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 1.6E-45 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 4.5E-137 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 SUPERFAMILY SSF53901 277 400 2.88E-46 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 SUPERFAMILY SSF53901 5 276 1.48E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 Gene3D G3DSA:3.40.47.10 274 398 1.1E-33 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 Gene3D G3DSA:3.40.47.10 2 273 1.7E-57 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS30430 a3451e8d2b365ea117d156e238680497 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL504_RS00800 0bba25f59c6fa4eaf77f833d75f984cb 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 322 1.6E-84 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00800 0bba25f59c6fa4eaf77f833d75f984cb 326 SUPERFAMILY SSF53850 114 292 6.27E-12 T 28-03-2018 AL504_RS00800 0bba25f59c6fa4eaf77f833d75f984cb 326 PIRSF PIRSF017082 1 326 1.9E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00800 0bba25f59c6fa4eaf77f833d75f984cb 326 Gene3D G3DSA:3.40.190.10 126 234 3.0E-11 T 28-03-2018 AL504_RS08905 fbbb92a18fdc144c1741e2c8e21bfe67 157 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 102 1.8E-41 T 28-03-2018 IPR018738 Protein of unknown function DUF2280 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 SMART SM00926 94 176 5.9E-11 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 Gene3D G3DSA:3.40.50.740 498 837 2.1E-31 T 28-03-2018 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 SUPERFAMILY SSF50692 912 1061 4.52E-25 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 Pfam PF01568 Molydopterin dinucleotide binding domain 932 1026 6.7E-12 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 SUPERFAMILY SSF53706 160 931 1.35E-106 T 28-03-2018 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 SUPERFAMILY SSF53706 94 133 1.35E-106 T 28-03-2018 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 Gene3D G3DSA:3.40.50.740 181 373 5.2E-19 T 28-03-2018 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 Gene3D G3DSA:2.20.25.90 88 180 4.2E-12 T 28-03-2018 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 Gene3D G3DSA:2.40.40.20 888 1062 2.5E-28 T 28-03-2018 AL504_RS07540 eac70b344eb6a7e1580fb82cf93c31ff 1062 Pfam PF00384 Molybdopterin oxidoreductase 269 722 1.1E-9 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS15700 a87e7db8a976a56500e93f322f962dbf 283 SUPERFAMILY SSF53474 43 280 7.19E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15700 a87e7db8a976a56500e93f322f962dbf 283 Gene3D G3DSA:3.40.50.1820 32 282 2.0E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15700 a87e7db8a976a56500e93f322f962dbf 283 Pfam PF12697 Alpha/beta hydrolase family 50 262 3.6E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 SUPERFAMILY SSF52467 158 363 9.63E-41 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 170 2.0E-44 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 438 457 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 SUPERFAMILY SSF52518 4 180 6.8E-46 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 Gene3D G3DSA:3.40.50.970 361 566 3.9E-42 T 28-03-2018 AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 Gene3D G3DSA:3.40.50.970 1 192 2.9E-44 T 28-03-2018 AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 402 550 3.4E-34 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 SUPERFAMILY SSF52518 377 558 3.04E-49 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 1.5E-31 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS05610 fb9f5c21cf59e0a552bb32ae8fd7018a 577 Gene3D G3DSA:3.40.50.1220 193 360 3.0E-42 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS31415 164ad9cbe825ecc91e67c8d88a8e0be4 566 Gene3D G3DSA:3.90.1640.10 56 248 5.3E-20 T 28-03-2018 AL504_RS31415 164ad9cbe825ecc91e67c8d88a8e0be4 566 SUPERFAMILY SSF64182 50 464 1.31E-110 T 28-03-2018 AL504_RS31415 164ad9cbe825ecc91e67c8d88a8e0be4 566 Pfam PF01368 DHH family 77 205 2.2E-8 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS31415 164ad9cbe825ecc91e67c8d88a8e0be4 566 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 564 3.2E-136 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AL504_RS31415 164ad9cbe825ecc91e67c8d88a8e0be4 566 Pfam PF02272 DHHA1 domain 324 452 1.3E-19 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 15 750 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Gene3D G3DSA:1.10.1780.10 13 156 4.0E-24 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 SMART SM00382 222 367 1.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 SMART SM00382 503 652 2.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Gene3D G3DSA:1.10.8.60 367 453 1.1E-27 T 28-03-2018 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 227 357 4.4E-12 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 534 552 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 669 749 1.6E-21 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 25 73 1.8E-12 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Pfam PF07724 AAA domain (Cdc48 subfamily) 502 663 8.4E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Gene3D G3DSA:1.10.8.60 669 772 2.5E-20 T 28-03-2018 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 318 330 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Gene3D G3DSA:3.40.50.300 181 366 2.9E-26 T 28-03-2018 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 Gene3D G3DSA:3.40.50.300 458 668 5.4E-44 T 28-03-2018 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 SUPERFAMILY SSF81923 14 155 1.57E-54 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 SUPERFAMILY SSF52540 184 431 1.6E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 SUPERFAMILY SSF52540 453 754 7.65E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 507 525 3.0E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 549 567 3.0E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 611 625 3.0E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 578 596 3.0E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS30460 603ceeeee57026637ca752084c86f77e 781 SMART SM01086 669 759 1.2E-31 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 310 2.8E-79 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 313 33.815 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 SUPERFAMILY SSF50486 212 311 1.82E-23 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 Gene3D G3DSA:3.10.25.10 214 313 9.8E-22 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 Pfam PF00551 Formyl transferase 2 188 6.9E-41 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 SUPERFAMILY SSF53328 1 214 3.27E-64 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 Gene3D G3DSA:3.40.50.170 1 213 1.8E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 Pfam PF02911 Formyl transferase, C-terminal domain 211 309 3.4E-20 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS21260 d5de6f23438c0cb2f0dc26494728b2a5 313 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 140 163 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 Gene3D G3DSA:2.30.33.40 1 95 1.6E-39 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 PRINTS PR00297 10kDa chaperonin signature 60 72 4.4E-33 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 PRINTS PR00297 10kDa chaperonin signature 81 94 4.4E-33 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 PRINTS PR00297 10kDa chaperonin signature 3 18 4.4E-33 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 PRINTS PR00297 10kDa chaperonin signature 25 46 4.4E-33 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 SUPERFAMILY SSF50129 1 94 9.42E-35 T 28-03-2018 IPR011032 GroES-like AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 6.1E-36 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.986 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS23550 2edf4ff765f085f2536f9d54f0719d63 95 SMART SM00883 2 94 2.3E-55 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL504_RS30525 867b1d53501d0293703c0e87227e2be9 207 Gene3D G3DSA:1.10.357.10 74 201 1.8E-25 T 28-03-2018 AL504_RS30525 867b1d53501d0293703c0e87227e2be9 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.6E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS30525 867b1d53501d0293703c0e87227e2be9 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.6E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS30525 867b1d53501d0293703c0e87227e2be9 207 SUPERFAMILY SSF48498 95 198 1.02E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS30525 867b1d53501d0293703c0e87227e2be9 207 Gene3D G3DSA:1.10.10.60 18 73 3.9E-14 T 28-03-2018 AL504_RS30525 867b1d53501d0293703c0e87227e2be9 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 70 6.6E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS30525 867b1d53501d0293703c0e87227e2be9 207 SUPERFAMILY SSF46689 21 89 6.16E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS28000 a6bb2e1923378b3420ea61709e590bc8 263 Gene3D G3DSA:3.40.1280.10 1 174 3.9E-39 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL504_RS28000 a6bb2e1923378b3420ea61709e590bc8 263 Pfam PF00588 SpoU rRNA Methylase family 8 162 1.3E-35 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL504_RS28000 a6bb2e1923378b3420ea61709e590bc8 263 SUPERFAMILY SSF75217 7 172 7.19E-31 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL504_RS28000 a6bb2e1923378b3420ea61709e590bc8 263 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 7 250 1.9E-52 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL504_RS28000 a6bb2e1923378b3420ea61709e590bc8 263 PIRSF PIRSF004808 3 259 2.5E-60 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 SMART SM00345 25 83 1.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 Gene3D G3DSA:1.10.10.10 2 85 1.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 Pfam PF00155 Aminotransferase class I and II 162 450 7.9E-24 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 5.7E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 Gene3D G3DSA:3.90.1150.10 413 510 1.0E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 SUPERFAMILY SSF46785 18 97 3.13E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 7.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 7.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 Gene3D G3DSA:3.40.640.10 163 412 1.7E-38 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS07780 b5454ab078cad30ed870eb064af1c574 512 SUPERFAMILY SSF53383 135 506 6.7E-80 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 Pfam PF12698 ABC-2 family transporter protein 575 904 1.5E-35 T 28-03-2018 AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 SUPERFAMILY SSF52540 277 496 6.69E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 Gene3D G3DSA:3.40.1710.10 584 736 2.1E-25 T 28-03-2018 AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 SUPERFAMILY SSF52540 11 239 1.81E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 Pfam PF00005 ABC transporter 294 437 1.7E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 Pfam PF00005 ABC transporter 28 175 8.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 SMART SM00382 37 233 1.1E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 SMART SM00382 302 502 5.6E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 Gene3D G3DSA:3.40.50.300 276 555 2.4E-63 T 28-03-2018 AL504_RS22830 80d04f648558c5d802a76a1d4b6f2b12 917 Gene3D G3DSA:3.40.50.300 9 265 8.6E-60 T 28-03-2018 AL504_RS21530 24c7523dad700485338190e560104433 283 SUPERFAMILY SSF47413 31 78 5.98E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS21530 24c7523dad700485338190e560104433 283 SMART SM00530 12 83 1.4E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS21530 24c7523dad700485338190e560104433 283 Pfam PF13560 Helix-turn-helix domain 9 86 2.8E-17 T 28-03-2018 AL504_RS21530 24c7523dad700485338190e560104433 283 Gene3D G3DSA:1.10.260.40 4 129 1.0E-12 T 28-03-2018 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Pfam PF00013 KH domain 562 618 2.8E-11 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Pfam PF00575 S1 RNA binding domain 624 695 1.4E-17 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 325 4.6E-18 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 PIRSF PIRSF005499 1 718 9.0E-296 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SUPERFAMILY SSF50249 619 707 1.04E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SUPERFAMILY SSF54791 560 644 1.37E-22 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SMART SM00316 625 695 8.1E-23 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SUPERFAMILY SSF54211 2 144 1.52E-52 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Gene3D G3DSA:3.30.1370.10 559 623 1.6E-15 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Pfam PF03725 3' exoribonuclease family, domain 2 466 533 4.9E-5 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Pfam PF03725 3' exoribonuclease family, domain 2 147 205 1.5E-11 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SUPERFAMILY SSF46915 239 326 1.23E-15 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SMART SM00322 557 622 1.8E-13 T 28-03-2018 IPR004087 K Homology domain GO:0003676 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Pfam PF01138 3' exoribonuclease family, domain 1 329 461 1.4E-24 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.6E-21 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 698 30.153 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SUPERFAMILY SSF54211 299 493 9.62E-50 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Gene3D G3DSA:3.30.230.70 14 233 1.5E-48 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Gene3D G3DSA:2.40.50.140 624 699 9.4E-22 T 28-03-2018 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Gene3D G3DSA:3.30.230.70 321 549 1.0E-60 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SUPERFAMILY SSF55666 458 565 3.51E-28 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 696 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 Gene3D G3DSA:1.10.10.400 234 320 5.0E-18 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL504_RS13115 2fdb25c2763cb3c4b8a73f1d3d5cbb73 718 SUPERFAMILY SSF55666 145 235 1.08E-30 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 SUPERFAMILY SSF48179 482 578 2.81E-26 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 SUPERFAMILY SSF48179 588 639 2.89E-6 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 306 479 5.5E-44 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 Gene3D G3DSA:1.10.1040.10 482 577 1.2E-20 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 Gene3D G3DSA:1.10.1040.10 588 640 0.13 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 483 572 1.1E-20 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 SUPERFAMILY SSF52096 7 264 7.65E-56 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 SUPERFAMILY SSF51735 304 481 5.02E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 Gene3D G3DSA:3.40.50.720 264 481 1.5E-44 T 28-03-2018 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 Gene3D G3DSA:3.90.226.10 3 206 1.0E-48 T 28-03-2018 AL504_RS28375 cad22b1244dcfc507ddc11b3dee7c227 645 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 202 2.7E-30 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 43 68 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 136 155 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 234 250 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 427 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 263 282 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 118 136 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 381 399 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 436 453 6.9E-43 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 22 514 1.4E-109 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 Pfam PF01019 Gamma-glutamyltranspeptidase 36 537 1.1E-151 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06775 ff2bc7f48a7e823f78d18ed17e0e3df5 542 SUPERFAMILY SSF56235 7 542 8.1E-176 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS22280 10125a89495d10ce978033ab0d63cbf5 463 Pfam PF00860 Permease family 38 429 1.1E-91 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL504_RS22280 10125a89495d10ce978033ab0d63cbf5 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 33 456 1.1E-119 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL504_RS22280 10125a89495d10ce978033ab0d63cbf5 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 376 396 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL504_RS22280 10125a89495d10ce978033ab0d63cbf5 463 TIGRFAM TIGR03173 pbuX: xanthine permease 41 460 7.6E-126 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AL504_RS18150 4303af37e1fede5b4ae28b2b2694388b 694 SMART SM00470 33 130 9.0E-18 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS18150 4303af37e1fede5b4ae28b2b2694388b 694 Pfam PF02195 ParB-like nuclease domain 35 129 2.4E-12 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS18150 4303af37e1fede5b4ae28b2b2694388b 694 Gene3D G3DSA:1.10.287.40 287 392 5.0E-5 T 28-03-2018 AL504_RS18150 4303af37e1fede5b4ae28b2b2694388b 694 SUPERFAMILY SSF109709 124 227 8.89E-19 T 28-03-2018 AL504_RS18150 4303af37e1fede5b4ae28b2b2694388b 694 Gene3D G3DSA:3.90.1530.10 20 130 6.6E-20 T 28-03-2018 AL504_RS18150 4303af37e1fede5b4ae28b2b2694388b 694 SUPERFAMILY SSF110849 42 132 5.23E-13 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS18150 4303af37e1fede5b4ae28b2b2694388b 694 Gene3D G3DSA:1.10.10.730 131 176 3.2E-9 T 28-03-2018 AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 23 179 23.233 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 Gene3D G3DSA:3.30.70.1070 242 312 1.2E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 SUPERFAMILY SSF50685 92 170 3.49E-6 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 SUPERFAMILY SSF110997 244 308 1.57E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 89 298 4.4E-41 T 28-03-2018 IPR012997 Rare lipoprotein A AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 Pfam PF03330 Lytic transglycolase 88 174 4.8E-23 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 Gene3D G3DSA:2.40.40.10 69 180 3.5E-22 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL504_RS21080 468f34da41dfdf4e12578368afb2289f 319 Pfam PF05036 Sporulation related domain 243 308 6.6E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 477 3.0E-48 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 SMART SM00304 209 261 3.0E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 SMART SM01049 33 126 2.9E-22 T 28-03-2018 IPR033480 Single Cache domain 2 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 Pfam PF17200 Single Cache domain 2 38 185 6.2E-35 T 28-03-2018 IPR033480 Single Cache domain 2 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 SUPERFAMILY SSF58104 229 510 2.75E-68 T 28-03-2018 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 Pfam PF00672 HAMP domain 210 256 9.2E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 Gene3D G3DSA:1.10.287.950 216 313 7.4E-10 T 28-03-2018 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 Gene3D G3DSA:3.30.450.20 28 188 6.1E-39 T 28-03-2018 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 418 2.3E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 2.3E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 360 387 2.3E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 2.3E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 203 2.3E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 SMART SM00283 262 509 3.0E-84 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS13360 ec4f2d6f4b1d05bb2b68d13db02d24d1 514 Gene3D G3DSA:1.10.287.950 314 513 3.4E-47 T 28-03-2018 AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 3 265 32.134 T 28-03-2018 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 Gene3D G3DSA:3.30.360.10 133 236 6.5E-37 T 28-03-2018 AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 Gene3D G3DSA:3.40.50.720 1 132 1.4E-20 T 28-03-2018 AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 PIRSF PIRSF005227 1 267 2.4E-80 T 28-03-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 Pfam PF01958 Domain of unknown function DUF108 166 253 2.1E-29 T 28-03-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 118 6.2E-17 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 SUPERFAMILY SSF51735 4 149 1.36E-20 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29875 ed20c6c1cb14fffdefc3acbc495f75e1 267 SUPERFAMILY SSF55347 121 236 7.85E-26 T 28-03-2018 AL504_RS01630 11d05e3fbb6fcc0a72674338d807a527 178 SUPERFAMILY SSF47741 95 163 8.5E-25 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AL504_RS01630 11d05e3fbb6fcc0a72674338d807a527 178 Gene3D G3DSA:3.10.20.30 10 85 3.8E-24 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS01630 11d05e3fbb6fcc0a72674338d807a527 178 Gene3D G3DSA:1.10.150.120 86 175 1.1E-27 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AL504_RS01630 11d05e3fbb6fcc0a72674338d807a527 178 SUPERFAMILY SSF54292 14 89 8.13E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS01630 11d05e3fbb6fcc0a72674338d807a527 178 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 17 73 4.4E-6 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS01630 11d05e3fbb6fcc0a72674338d807a527 178 Pfam PF01799 [2Fe-2S] binding domain 84 156 1.8E-22 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AL504_RS01630 11d05e3fbb6fcc0a72674338d807a527 178 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 50 58 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL504_RS07900 ff1bb09541ce2b504dac7aaee28e3e3e 209 Gene3D G3DSA:3.40.30.10 1 95 3.1E-30 T 28-03-2018 AL504_RS07900 ff1bb09541ce2b504dac7aaee28e3e3e 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 194 1.9E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS07900 ff1bb09541ce2b504dac7aaee28e3e3e 209 SUPERFAMILY SSF52833 2 89 3.29E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS07900 ff1bb09541ce2b504dac7aaee28e3e3e 209 SUPERFAMILY SSF47616 90 200 8.63E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS07900 ff1bb09541ce2b504dac7aaee28e3e3e 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 83 1.0E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS07900 ff1bb09541ce2b504dac7aaee28e3e3e 209 Gene3D G3DSA:1.20.1050.10 96 207 2.0E-20 T 28-03-2018 AL504_RS17665 2a4776fcc00dcac1e7c7e8c919d75dcb 314 Gene3D G3DSA:3.40.50.1980 19 152 9.6E-19 T 28-03-2018 AL504_RS17665 2a4776fcc00dcac1e7c7e8c919d75dcb 314 Pfam PF01497 Periplasmic binding protein 55 291 2.1E-19 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS17665 2a4776fcc00dcac1e7c7e8c919d75dcb 314 Gene3D G3DSA:3.40.50.1980 153 312 1.0E-23 T 28-03-2018 AL504_RS17665 2a4776fcc00dcac1e7c7e8c919d75dcb 314 SUPERFAMILY SSF53807 35 299 3.14E-34 T 28-03-2018 AL504_RS03780 9d258472ad372d6ceb2a0e68ef40372e 441 SUPERFAMILY SSF103473 13 428 6.67E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS03780 9d258472ad372d6ceb2a0e68ef40372e 441 Pfam PF07690 Major Facilitator Superfamily 19 383 4.0E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS03780 9d258472ad372d6ceb2a0e68ef40372e 441 Gene3D G3DSA:1.20.1250.20 241 441 4.2E-13 T 28-03-2018 AL504_RS03780 9d258472ad372d6ceb2a0e68ef40372e 441 Gene3D G3DSA:1.20.1250.20 12 228 3.5E-22 T 28-03-2018 AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 Gene3D G3DSA:3.40.50.300 1 240 1.1E-76 T 28-03-2018 AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 Gene3D G3DSA:2.40.50.140 286 338 6.6E-11 T 28-03-2018 AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 Pfam PF08402 TOBE domain 274 344 2.1E-12 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 317 5.9E-109 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 Gene3D G3DSA:2.40.50.100 241 285 0.0021 T 28-03-2018 AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 SMART SM00382 29 212 2.9E-23 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 SUPERFAMILY SSF52540 4 245 6.14E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 SUPERFAMILY SSF50331 239 346 5.44E-16 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS26655 791abd2341222fcedb1e79b99c51f47b 349 Pfam PF00005 ABC transporter 20 162 3.9E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 Pfam PF00501 AMP-binding enzyme 12 433 1.2E-95 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 SUPERFAMILY SSF56801 5 532 2.88E-143 T 28-03-2018 AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 Gene3D G3DSA:2.30.38.10 351 426 1.2E-24 T 28-03-2018 AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 Gene3D G3DSA:3.30.300.30 427 531 2.5E-25 T 28-03-2018 AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 Gene3D G3DSA:3.40.50.980 3 192 1.2E-42 T 28-03-2018 AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 512 3.4E-17 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS26240 b28038c8bbb4bfeb4cb87634bcbdcb9f 540 Gene3D G3DSA:3.40.50.980 193 349 2.1E-38 T 28-03-2018 AL504_RS00250 b49e1f5663ab07bafb53d12ba7a811f7 228 SMART SM00903 19 172 9.3E-24 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS00250 b49e1f5663ab07bafb53d12ba7a811f7 228 Pfam PF01613 Flavin reductase like domain 22 162 8.5E-21 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS00250 b49e1f5663ab07bafb53d12ba7a811f7 228 Gene3D G3DSA:2.30.110.10 12 215 4.3E-42 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS00250 b49e1f5663ab07bafb53d12ba7a811f7 228 SUPERFAMILY SSF50475 1 178 8.72E-40 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 26 158 5.4E-36 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 SMART SM00028 42 75 24.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 SMART SM00028 76 109 30.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 SMART SM00028 110 143 43.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 SUPERFAMILY SSF48452 39 145 2.02E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 Gene3D G3DSA:1.25.40.10 12 81 3.5E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 Gene3D G3DSA:1.25.40.10 82 127 5.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 Pfam PF07720 Tetratricopeptide repeat 43 73 2.0E-4 T 28-03-2018 IPR011716 Tetratricopeptide TPR-3 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 28 51 2.8E-21 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 77 99 2.8E-21 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 109 131 2.8E-21 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 53 72 2.8E-21 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15395 ae39b12f126e1610d4edf5eabbe4536f 167 Gene3D G3DSA:1.25.40.10 128 164 0.034 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 PRINTS PR00986 Valyl-tRNA synthetase signature 266 283 3.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 PRINTS PR00986 Valyl-tRNA synthetase signature 526 544 3.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 PRINTS PR00986 Valyl-tRNA synthetase signature 495 516 3.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 PRINTS PR00986 Valyl-tRNA synthetase signature 382 395 3.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 PRINTS PR00986 Valyl-tRNA synthetase signature 59 70 3.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 Hamap MF_02004 Valine--tRNA ligase [valS]. 19 965 15.382 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 SUPERFAMILY SSF50677 214 377 1.06E-57 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 Gene3D G3DSA:1.10.730.10 640 813 1.8E-53 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 SUPERFAMILY SSF47323 662 915 1.87E-59 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 SUPERFAMILY SSF46589 900 964 1.46E-16 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 Gene3D G3DSA:3.40.50.620 20 639 1.4E-131 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 964 9.8E-22 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 Gene3D G3DSA:1.10.287.380 894 962 2.9E-21 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 TIGRFAM TIGR00422 valS: valine--tRNA ligase 20 946 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 32 651 4.7E-201 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 SUPERFAMILY SSF52374 377 591 3.34E-132 T 28-03-2018 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 SUPERFAMILY SSF52374 20 215 3.34E-132 T 28-03-2018 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 SUPERFAMILY SSF52374 629 661 3.34E-132 T 28-03-2018 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 Pfam PF08264 Anticodon-binding domain of tRNA 693 845 8.4E-38 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL504_RS09160 84b8a42b6141bf86aeed13d3075b7c83 966 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 77 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 158 809 9.2E-104 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 Gene3D G3DSA:2.170.130.10 111 266 9.0E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 Pfam PF07715 TonB-dependent Receptor Plug Domain 156 255 1.3E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 Pfam PF00593 TonB dependent receptor 360 808 2.1E-44 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 Pfam PF07660 Secretin and TonB N terminus short domain 63 111 1.5E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 SUPERFAMILY SSF56935 114 809 5.9E-123 T 28-03-2018 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 Gene3D G3DSA:2.40.170.20 267 809 3.4E-76 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12890 658658bb21228cb147f2fcd64b593350 809 SMART SM00965 61 112 1.9E-12 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 407 413 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 Gene3D G3DSA:1.20.1110.10 605 932 3.5E-55 T 28-03-2018 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 Gene3D G3DSA:2.70.150.10 64 306 2.0E-43 T 28-03-2018 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 Pfam PF00122 E1-E2 ATPase 202 385 2.1E-48 T 28-03-2018 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 47 935 0.0 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 SUPERFAMILY SSF81660 400 584 1.59E-39 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 Pfam PF00702 haloacid dehalogenase-like hydrolase 401 690 9.6E-19 T 28-03-2018 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 205 441 1.4E-33 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 646 765 1.1E-29 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 318 334 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 335 354 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 752 763 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 439 452 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 784 797 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 804 820 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 734 749 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 839 860 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 PRINTS PR01836 Magnesium-transporting ATPase signature 889 910 1.7E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 Pfam PF00689 Cation transporting ATPase, C-terminus 759 925 1.7E-17 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 SUPERFAMILY SSF81665 306 399 2.48E-108 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 SUPERFAMILY SSF81665 53 174 2.48E-108 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 SUPERFAMILY SSF81665 725 933 2.48E-108 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 SUPERFAMILY SSF81653 203 304 6.8E-28 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 Gene3D G3DSA:3.40.1110.10 362 583 1.1E-38 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 SUPERFAMILY SSF56784 569 720 1.67E-34 T 28-03-2018 IPR023214 HAD-like domain AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 Pfam PF00690 Cation transporter/ATPase, N-terminus 59 122 1.1E-12 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AL504_RS13690 5f1beab004a6c343eb9d1dbb705668df 935 SMART SM00831 54 127 4.1E-5 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AL504_RS28150 0a022dc56286d225e6da1d8433cd9212 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 13 473 2.9E-230 T 28-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL504_RS28150 0a022dc56286d225e6da1d8433cd9212 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 208 263 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS28150 0a022dc56286d225e6da1d8433cd9212 488 SUPERFAMILY SSF81442 15 470 1.06E-124 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS28150 0a022dc56286d225e6da1d8433cd9212 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 6.0E-116 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS28150 0a022dc56286d225e6da1d8433cd9212 488 Gene3D G3DSA:1.20.210.10 7 476 1.6E-94 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS13320 fa1a39865734fe935c4c6d3c44b32540 598 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 598 35.561 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AL504_RS13320 fa1a39865734fe935c4c6d3c44b32540 598 Pfam PF03814 Potassium-transporting ATPase A subunit 11 596 5.0E-241 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AL504_RS13320 fa1a39865734fe935c4c6d3c44b32540 598 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 243 597 1.0E-152 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AL504_RS13320 fa1a39865734fe935c4c6d3c44b32540 598 PIRSF PIRSF001294 1 598 5.6E-237 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AL504_RS16805 b34936fe36870c28502f83c2b9a4a3d7 537 SUPERFAMILY SSF53850 17 517 2.35E-125 T 28-03-2018 AL504_RS16805 b34936fe36870c28502f83c2b9a4a3d7 537 PIRSF PIRSF002741 11 524 1.3E-91 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS16805 b34936fe36870c28502f83c2b9a4a3d7 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 64 448 7.5E-88 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS16805 b34936fe36870c28502f83c2b9a4a3d7 537 Gene3D G3DSA:3.10.105.10 311 508 6.0E-51 T 28-03-2018 AL504_RS16805 b34936fe36870c28502f83c2b9a4a3d7 537 Gene3D G3DSA:3.90.76.10 31 176 7.0E-30 T 28-03-2018 AL504_RS16805 b34936fe36870c28502f83c2b9a4a3d7 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 70 91 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL504_RS16805 b34936fe36870c28502f83c2b9a4a3d7 537 Gene3D G3DSA:3.40.190.10 187 310 5.8E-33 T 28-03-2018 AL504_RS02270 e1202c07e98fcaaaa97775a7c7b93d1d 222 Gene3D G3DSA:1.10.3720.10 2 219 2.6E-47 T 28-03-2018 AL504_RS02270 e1202c07e98fcaaaa97775a7c7b93d1d 222 SUPERFAMILY SSF161098 15 201 2.75E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02270 e1202c07e98fcaaaa97775a7c7b93d1d 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 3.6E-29 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS02270 e1202c07e98fcaaaa97775a7c7b93d1d 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 8.3E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 6.3E-19 T 28-03-2018 AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 Gene3D G3DSA:1.10.10.60 2 58 5.6E-23 T 28-03-2018 AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 SUPERFAMILY SSF48498 87 201 7.23E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 1.7E-19 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 SUPERFAMILY SSF46689 5 81 1.4E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.8E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.8E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS03755 076ad8089c7ee99a9c54590b13b385ae 205 Gene3D G3DSA:1.10.357.10 59 204 5.1E-22 T 28-03-2018 AL504_RS17510 e0abe443813b962ee36f369986f12335 240 Gene3D G3DSA:3.40.1410.10 76 239 2.1E-41 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS17510 e0abe443813b962ee36f369986f12335 240 SMART SM00345 16 75 5.0E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17510 e0abe443813b962ee36f369986f12335 240 SUPERFAMILY SSF46785 9 79 1.91E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17510 e0abe443813b962ee36f369986f12335 240 Pfam PF07702 UTRA domain 96 233 9.8E-37 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS17510 e0abe443813b962ee36f369986f12335 240 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 11 239 1.0E-105 T 28-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AL504_RS17510 e0abe443813b962ee36f369986f12335 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.9E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17510 e0abe443813b962ee36f369986f12335 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.1E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17510 e0abe443813b962ee36f369986f12335 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.1E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS17510 e0abe443813b962ee36f369986f12335 240 Gene3D G3DSA:1.10.10.10 2 75 7.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17510 e0abe443813b962ee36f369986f12335 240 SUPERFAMILY SSF64288 63 236 2.51E-45 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS17510 e0abe443813b962ee36f369986f12335 240 SMART SM00866 96 233 1.6E-36 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS24230 2ac7ab17bec04181049753d220c3ef8f 221 PIRSF PIRSF000887 11 202 5.8E-40 T 28-03-2018 IPR024173 Phosphoesterase, MJ0037 AL504_RS24230 2ac7ab17bec04181049753d220c3ef8f 221 Gene3D G3DSA:3.60.21.10 34 206 9.5E-10 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS24230 2ac7ab17bec04181049753d220c3ef8f 221 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 12 211 4.3E-56 T 28-03-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated AL504_RS24230 2ac7ab17bec04181049753d220c3ef8f 221 Pfam PF00149 Calcineurin-like phosphoesterase 34 125 2.3E-5 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS24230 2ac7ab17bec04181049753d220c3ef8f 221 SUPERFAMILY SSF56300 34 167 1.4E-11 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 SMART SM00065 17 163 5.0E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 Pfam PF00990 Diguanylate cyclase, GGDEF domain 173 345 1.5E-32 T 28-03-2018 IPR000160 GGDEF domain AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 SUPERFAMILY SSF55073 178 346 9.42E-33 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 171 346 3.8E-35 T 28-03-2018 IPR000160 GGDEF domain AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 Gene3D G3DSA:3.30.450.40 4 167 5.1E-23 T 28-03-2018 IPR029016 GAF domain-like AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 SUPERFAMILY SSF55781 18 165 3.93E-17 T 28-03-2018 IPR029016 GAF domain-like AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 Gene3D G3DSA:3.30.70.270 168 351 1.7E-44 T 28-03-2018 AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 SMART SM00267 162 351 1.9E-36 T 28-03-2018 IPR000160 GGDEF domain AL504_RS24435 041a34ede4580e731258d6c721d7877b 351 Pfam PF13492 GAF domain 21 155 1.1E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.3E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 SUPERFAMILY SSF74731 2 117 2.62E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.158 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 Gene3D G3DSA:1.10.1900.20 55 116 6.0E-29 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.7E-39 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.7E-39 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.7E-39 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 4.0E-22 T 28-03-2018 AL504_RS08355 1992ed2c46066a88ef5dcfcc9ccb5a7f 119 Pfam PF00453 Ribosomal protein L20 3 109 1.3E-48 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Pfam PF11798 IMS family HHH motif 169 200 4.3E-10 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Pfam PF00817 impB/mucB/samB family 11 157 2.3E-51 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Gene3D G3DSA:1.10.150.20 174 246 2.1E-25 T 28-03-2018 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Gene3D G3DSA:3.30.1490.100 247 352 1.4E-21 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 SUPERFAMILY SSF56672 3 237 2.85E-98 T 28-03-2018 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Hamap MF_01113 DNA polymerase IV [dinB]. 5 355 37.785 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Gene3D G3DSA:3.30.70.270 116 173 3.5E-23 T 28-03-2018 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Gene3D G3DSA:3.30.70.270 44 115 8.8E-26 T 28-03-2018 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 SUPERFAMILY SSF100879 243 342 5.89E-20 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL504_RS08070 9bc5cc8baea63713a72f5e7388541e9d 360 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 350 4.2E-18 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL504_RS12720 5721cac6c9eed06a56cb0e80a69938a5 519 Gene3D G3DSA:3.40.190.10 155 296 1.4E-27 T 28-03-2018 AL504_RS12720 5721cac6c9eed06a56cb0e80a69938a5 519 Gene3D G3DSA:3.10.105.10 297 490 3.7E-42 T 28-03-2018 AL504_RS12720 5721cac6c9eed06a56cb0e80a69938a5 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 437 2.6E-78 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS12720 5721cac6c9eed06a56cb0e80a69938a5 519 Gene3D G3DSA:3.90.76.10 41 154 7.4E-28 T 28-03-2018 AL504_RS12720 5721cac6c9eed06a56cb0e80a69938a5 519 SUPERFAMILY SSF53850 16 503 1.3E-113 T 28-03-2018 AL504_RS12720 5721cac6c9eed06a56cb0e80a69938a5 519 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL504_RS12720 5721cac6c9eed06a56cb0e80a69938a5 519 PIRSF PIRSF002741 10 512 7.6E-93 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS15100 09861bc3157657b4082046f14c2583c5 251 SMART SM00382 31 234 3.7E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15100 09861bc3157657b4082046f14c2583c5 251 Gene3D G3DSA:3.40.50.300 1 251 2.8E-57 T 28-03-2018 AL504_RS15100 09861bc3157657b4082046f14c2583c5 251 SUPERFAMILY SSF52540 5 247 6.41E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15100 09861bc3157657b4082046f14c2583c5 251 Pfam PF00005 ABC transporter 23 178 1.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS15100 09861bc3157657b4082046f14c2583c5 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 2.4E-9 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS03655 ae467d9a7eeac80fdb28d7f6e4acd757 208 Gene3D G3DSA:3.40.430.10 3 195 4.2E-37 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS03655 ae467d9a7eeac80fdb28d7f6e4acd757 208 SUPERFAMILY SSF53597 1 195 1.57E-26 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS03655 ae467d9a7eeac80fdb28d7f6e4acd757 208 Pfam PF01872 RibD C-terminal domain 2 189 1.8E-23 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL504_RS22500 e610f4a1d760b6a663f809a8d353c0b1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.9E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS22500 e610f4a1d760b6a663f809a8d353c0b1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.9E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS22500 e610f4a1d760b6a663f809a8d353c0b1 206 Gene3D G3DSA:1.10.357.10 68 199 1.4E-19 T 28-03-2018 AL504_RS22500 e610f4a1d760b6a663f809a8d353c0b1 206 SUPERFAMILY SSF46689 16 91 3.28E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS22500 e610f4a1d760b6a663f809a8d353c0b1 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 68 8.2E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS22500 e610f4a1d760b6a663f809a8d353c0b1 206 SUPERFAMILY SSF48498 92 180 1.72E-10 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS22500 e610f4a1d760b6a663f809a8d353c0b1 206 Gene3D G3DSA:1.10.10.60 1 67 3.1E-15 T 28-03-2018 AL504_RS01615 0873bcd432404f45c01c1c46c9e9036c 357 Gene3D G3DSA:3.40.50.1220 15 100 0.011 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS01615 0873bcd432404f45c01c1c46c9e9036c 357 SUPERFAMILY SSF144052 20 332 1.01E-15 T 28-03-2018 AL504_RS12830 5b24808fe6cbe74c05b2b91e17d785f0 360 SUPERFAMILY SSF53850 45 328 3.13E-41 T 28-03-2018 AL504_RS12830 5b24808fe6cbe74c05b2b91e17d785f0 360 Gene3D G3DSA:3.40.190.10 9 183 8.0E-16 T 28-03-2018 AL504_RS12830 5b24808fe6cbe74c05b2b91e17d785f0 360 Pfam PF13531 Bacterial extracellular solute-binding protein 46 311 9.0E-20 T 28-03-2018 AL504_RS12830 5b24808fe6cbe74c05b2b91e17d785f0 360 Gene3D G3DSA:3.40.190.10 195 329 1.9E-12 T 28-03-2018 AL504_RS20500 02e6d4743fb9582eb37b6b17d9373a28 288 Gene3D G3DSA:3.20.10.10 140 287 5.0E-34 T 28-03-2018 AL504_RS20500 02e6d4743fb9582eb37b6b17d9373a28 288 Pfam PF01063 Amino-transferase class IV 37 259 7.4E-41 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS20500 02e6d4743fb9582eb37b6b17d9373a28 288 SUPERFAMILY SSF56752 11 281 1.44E-73 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS20500 02e6d4743fb9582eb37b6b17d9373a28 288 Gene3D G3DSA:3.30.470.10 7 139 7.2E-34 T 28-03-2018 AL504_RS20850 fe3e425f9a5d7c66be44e9f8bba58460 422 Gene3D G3DSA:3.40.50.980 114 270 4.3E-16 T 28-03-2018 AL504_RS20850 fe3e425f9a5d7c66be44e9f8bba58460 422 Pfam PF00501 AMP-binding enzyme 138 287 3.0E-14 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS20850 fe3e425f9a5d7c66be44e9f8bba58460 422 Gene3D G3DSA:3.30.300.30 325 415 3.9E-4 T 28-03-2018 AL504_RS20850 fe3e425f9a5d7c66be44e9f8bba58460 422 SUPERFAMILY SSF56801 123 391 3.66E-34 T 28-03-2018 AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 6.8E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 6.8E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 6.8E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 Gene3D G3DSA:3.40.50.720 6 52 0.0018 T 28-03-2018 AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 Gene3D G3DSA:3.40.50.720 53 270 4.7E-64 T 28-03-2018 AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 1.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 267 3.9E-62 T 28-03-2018 AL504_RS21675 62320181d0678c45b7b14dfd6827836a 271 SUPERFAMILY SSF51735 12 267 3.11E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29015 9c9f152ba553cf4a050442801a1285a7 196 Gene3D G3DSA:1.25.40.10 50 196 8.4E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS29015 9c9f152ba553cf4a050442801a1285a7 196 Pfam PF14137 Domain of unknown function (DUF4304) 15 118 2.1E-11 T 28-03-2018 IPR025412 Protein of unknown function DUF4304 AL504_RS00560 fe2ded4c260bd0e904a13dfd4bbff786 317 Pfam PF00561 alpha/beta hydrolase fold 68 285 1.2E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS00560 fe2ded4c260bd0e904a13dfd4bbff786 317 SUPERFAMILY SSF53474 57 315 2.28E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00560 fe2ded4c260bd0e904a13dfd4bbff786 317 Gene3D G3DSA:3.40.50.1820 2 317 1.1E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00305 c30ea9b2e798306b2945b0f35fb9ea4f 314 SUPERFAMILY SSF53300 85 218 5.28E-8 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS00305 c30ea9b2e798306b2945b0f35fb9ea4f 314 Pfam PF01882 Protein of unknown function DUF58 49 133 1.5E-18 T 28-03-2018 IPR002881 Domain of unknown function DUF58 AL504_RS00305 c30ea9b2e798306b2945b0f35fb9ea4f 314 Gene3D G3DSA:3.40.50.410 61 314 1.0E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 SUPERFAMILY SSF50249 5 59 5.6E-12 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 Gene3D G3DSA:3.40.50.150 69 435 1.4E-49 T 28-03-2018 AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 Gene3D G3DSA:2.40.50.140 4 68 3.3E-23 T 28-03-2018 AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 10 429 7.1E-91 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 SUPERFAMILY SSF53335 62 435 5.67E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 256 431 2.7E-14 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 4 437 68.844 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 419 429 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL504_RS05150 b6d74f0dbdff6a6be549fc99b134d472 501 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 397 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site AL504_RS26550 e966cdb073e69306cf2f7931143f8c70 189 SUPERFAMILY SSF88946 6 107 1.61E-23 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26550 e966cdb073e69306cf2f7931143f8c70 189 Gene3D G3DSA:1.10.10.10 119 186 3.3E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26550 e966cdb073e69306cf2f7931143f8c70 189 SUPERFAMILY SSF88659 125 188 1.27E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26550 e966cdb073e69306cf2f7931143f8c70 189 Pfam PF04542 Sigma-70 region 2 29 96 4.9E-20 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26550 e966cdb073e69306cf2f7931143f8c70 189 Gene3D G3DSA:1.10.1740.10 13 99 3.1E-23 T 28-03-2018 AL504_RS26550 e966cdb073e69306cf2f7931143f8c70 189 Pfam PF08281 Sigma-70, region 4 137 184 1.4E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26550 e966cdb073e69306cf2f7931143f8c70 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 188 3.5E-28 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24750 30990afc9a0e24534e270545b9a6817e 692 Pfam PF00563 EAL domain 442 665 2.4E-54 T 28-03-2018 IPR001633 EAL domain AL504_RS24750 30990afc9a0e24534e270545b9a6817e 692 SMART SM00052 431 671 4.4E-59 T 28-03-2018 IPR001633 EAL domain AL504_RS24750 30990afc9a0e24534e270545b9a6817e 692 SUPERFAMILY SSF141868 441 679 8.5E-61 T 28-03-2018 IPR001633 EAL domain AL504_RS24750 30990afc9a0e24534e270545b9a6817e 692 Gene3D G3DSA:3.20.20.450 420 673 1.0E-65 T 28-03-2018 IPR001633 EAL domain AL504_RS24750 30990afc9a0e24534e270545b9a6817e 692 Pfam PF02378 Phosphotransferase system, EIIC 22 323 2.5E-20 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Gene3D G3DSA:3.40.50.2300 862 997 3.4E-23 T 28-03-2018 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SMART SM00065 34 187 3.6E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Pfam PF08447 PAS fold 507 579 7.7E-12 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Pfam PF00512 His Kinase A (phospho-acceptor) domain 617 682 5.2E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SUPERFAMILY SSF52172 873 988 1.57E-24 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Pfam PF08448 PAS fold 219 307 1.6E-10 T 28-03-2018 IPR013656 PAS fold-4 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Gene3D G3DSA:3.30.450.20 482 611 1.7E-19 T 28-03-2018 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SUPERFAMILY SSF55874 674 848 5.76E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Gene3D G3DSA:3.30.450.40 311 481 4.7E-9 T 28-03-2018 IPR029016 GAF domain-like AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Gene3D G3DSA:1.10.287.130 612 680 1.1E-8 T 28-03-2018 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SMART SM00388 616 684 8.6E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SUPERFAMILY SSF55785 490 595 4.79E-17 T 28-03-2018 IPR000014 PAS domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 188 313 3.3E-7 T 28-03-2018 IPR000014 PAS domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 487 581 7.3E-12 T 28-03-2018 IPR000014 PAS domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Pfam PF13185 GAF domain 35 178 7.3E-14 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Gene3D G3DSA:3.30.450.20 190 310 2.3E-18 T 28-03-2018 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SMART SM00448 871 983 6.5E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Gene3D G3DSA:3.30.450.40 13 189 2.4E-22 T 28-03-2018 IPR029016 GAF domain-like AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SUPERFAMILY SSF47384 607 681 7.26E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SMART SM00091 191 265 1.9 T 28-03-2018 IPR000014 PAS domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SMART SM00091 483 549 2.1E-9 T 28-03-2018 IPR000014 PAS domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Pfam PF00072 Response regulator receiver domain 873 983 1.3E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SUPERFAMILY SSF55785 178 304 3.49E-13 T 28-03-2018 IPR000014 PAS domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Gene3D G3DSA:3.30.565.10 683 848 2.5E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SUPERFAMILY SSF55781 55 189 4.14E-21 T 28-03-2018 IPR029016 GAF domain-like AL504_RS04365 fb67bf397022476769405c6415d26415 1003 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 726 846 1.8E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 SMART SM00387 725 848 4.7E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04365 fb67bf397022476769405c6415d26415 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 791 1.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 826 1.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 845 1.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04365 fb67bf397022476769405c6415d26415 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 805 1.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS09895 4fbc6b5b46d25622ed0d92c581e10873 371 Gene3D G3DSA:3.40.50.2000 2 177 8.7E-18 T 28-03-2018 AL504_RS09895 4fbc6b5b46d25622ed0d92c581e10873 371 SUPERFAMILY SSF53756 4 369 4.71E-66 T 28-03-2018 AL504_RS09895 4fbc6b5b46d25622ed0d92c581e10873 371 Pfam PF13439 Glycosyltransferase Family 4 14 167 1.1E-20 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS09895 4fbc6b5b46d25622ed0d92c581e10873 371 Pfam PF00534 Glycosyl transferases group 1 187 345 4.3E-24 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS09895 4fbc6b5b46d25622ed0d92c581e10873 371 Gene3D G3DSA:3.40.50.2000 178 351 4.3E-36 T 28-03-2018 AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 PIRSF PIRSF000089 1 309 5.5E-108 T 28-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 Gene3D G3DSA:3.40.50.620 1 183 5.2E-44 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 3.3E-36 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 SMART SM00893 3 182 7.3E-58 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 Gene3D G3DSA:3.40.50.1220 185 309 5.3E-60 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 28-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 SUPERFAMILY SSF52402 3 186 4.67E-58 T 28-03-2018 AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 SUPERFAMILY SSF52467 189 308 3.69E-48 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS11340 52379ff1b4ede49eee0e95286f1a89fa 309 Pfam PF01012 Electron transfer flavoprotein domain 3 169 2.9E-40 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 SUPERFAMILY SSF46785 1 111 3.38E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 Gene3D G3DSA:3.40.190.10 178 266 3.2E-25 T 28-03-2018 AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 Gene3D G3DSA:3.40.190.10 87 177 1.0E-20 T 28-03-2018 AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 Gene3D G3DSA:1.10.10.10 1 84 3.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 Pfam PF03466 LysR substrate binding domain 88 290 7.3E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 SUPERFAMILY SSF53850 90 293 2.05E-38 T 28-03-2018 AL504_RS14645 c18cf2e202aa485de8d8cc996d4a79f1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25085 21ddf952ea0d22f860f5ffa0b4e3d67e 207 Pfam PF03006 Haemolysin-III related 4 197 7.9E-35 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AL504_RS25085 21ddf952ea0d22f860f5ffa0b4e3d67e 207 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 202 7.0E-52 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AL504_RS03840 b2f8e2ae9eb2b6fa63f9517843e978ac 266 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 2 266 3.0E-138 T 28-03-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 AL504_RS03840 b2f8e2ae9eb2b6fa63f9517843e978ac 266 SUPERFAMILY SSF56529 1 266 1.31E-77 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS03840 b2f8e2ae9eb2b6fa63f9517843e978ac 266 Gene3D G3DSA:3.90.850.10 1 266 6.3E-48 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS03840 b2f8e2ae9eb2b6fa63f9517843e978ac 266 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 87 264 1.1E-7 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS27195 a2363c5aa23ec9088c6ff052693256c8 222 Gene3D G3DSA:3.40.50.1820 1 40 6.4E-4 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27195 a2363c5aa23ec9088c6ff052693256c8 222 SUPERFAMILY SSF53474 9 217 7.64E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27195 a2363c5aa23ec9088c6ff052693256c8 222 Gene3D G3DSA:3.40.50.1820 41 220 2.7E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS12480 67c32f9efd04626a1c5c9e7f2da32558 285 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 79 249 2.0E-32 T 28-03-2018 AL504_RS12480 67c32f9efd04626a1c5c9e7f2da32558 285 SUPERFAMILY SSF56784 75 284 2.53E-47 T 28-03-2018 IPR023214 HAD-like domain AL504_RS12480 67c32f9efd04626a1c5c9e7f2da32558 285 Gene3D G3DSA:1.10.150.210 89 136 1.7E-23 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AL504_RS12480 67c32f9efd04626a1c5c9e7f2da32558 285 Pfam PF12710 haloacid dehalogenase-like hydrolase 81 248 6.3E-19 T 28-03-2018 AL504_RS12480 67c32f9efd04626a1c5c9e7f2da32558 285 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 74 280 1.5E-69 T 28-03-2018 AL504_RS12480 67c32f9efd04626a1c5c9e7f2da32558 285 Pfam PF13284 Domain of unknown function (DUF4072) 6 53 1.7E-13 T 28-03-2018 IPR025138 Domain of unknown function DUF4072 AL504_RS12480 67c32f9efd04626a1c5c9e7f2da32558 285 Gene3D G3DSA:3.40.50.1000 137 283 4.6E-24 T 28-03-2018 IPR023214 HAD-like domain AL504_RS29405 0bacc40aa633e2647f4af483ade8f256 453 Gene3D G3DSA:3.40.190.10 201 410 1.1E-39 T 28-03-2018 AL504_RS29405 0bacc40aa633e2647f4af483ade8f256 453 Gene3D G3DSA:3.40.190.10 95 194 9.8E-11 T 28-03-2018 AL504_RS29405 0bacc40aa633e2647f4af483ade8f256 453 SUPERFAMILY SSF53850 96 328 1.36E-40 T 28-03-2018 AL504_RS29405 0bacc40aa633e2647f4af483ade8f256 453 Pfam PF13379 NMT1-like family 95 333 1.2E-78 T 28-03-2018 AL504_RS09395 f871d85eab61caa70f14677b4c532439 295 SUPERFAMILY SSF103481 38 137 6.67E-9 T 28-03-2018 AL504_RS09395 f871d85eab61caa70f14677b4c532439 295 Pfam PF00892 EamA-like transporter family 7 136 4.0E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS09395 f871d85eab61caa70f14677b4c532439 295 Pfam PF00892 EamA-like transporter family 148 277 1.4E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS09395 f871d85eab61caa70f14677b4c532439 295 SUPERFAMILY SSF103481 182 282 1.7E-16 T 28-03-2018 AL504_RS07360 83b4c520e6c55441bb02bd08dbae08f0 671 Pfam PF00593 TonB dependent receptor 242 669 1.1E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS07360 83b4c520e6c55441bb02bd08dbae08f0 671 Gene3D G3DSA:2.40.170.20 150 671 4.6E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS07360 83b4c520e6c55441bb02bd08dbae08f0 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 134 4.1E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS07360 83b4c520e6c55441bb02bd08dbae08f0 671 Gene3D G3DSA:2.170.130.10 15 141 2.6E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS07360 83b4c520e6c55441bb02bd08dbae08f0 671 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 38 668 1.1E-105 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS07360 83b4c520e6c55441bb02bd08dbae08f0 671 SUPERFAMILY SSF56935 26 671 8.9E-126 T 28-03-2018 AL504_RS19495 9d46eb27bfd6f74af18252bb95a82f47 265 SUPERFAMILY SSF52540 10 262 1.05E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19495 9d46eb27bfd6f74af18252bb95a82f47 265 PIRSF PIRSF009320 10 92 7.4E-14 T 28-03-2018 AL504_RS19495 9d46eb27bfd6f74af18252bb95a82f47 265 PIRSF PIRSF009320 95 263 4.2E-10 T 28-03-2018 AL504_RS19495 9d46eb27bfd6f74af18252bb95a82f47 265 Pfam PF13614 AAA domain 11 185 9.9E-65 T 28-03-2018 IPR025669 AAA domain AL504_RS19495 9d46eb27bfd6f74af18252bb95a82f47 265 Gene3D G3DSA:3.40.50.300 9 265 8.7E-59 T 28-03-2018 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 PIRSF PIRSF001365 3 297 9.3E-66 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 289 43.241 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.1E-15 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.1E-15 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 1.1E-15 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 Pfam PF00701 Dihydrodipicolinate synthetase family 8 278 2.5E-52 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 14 284 2.0E-65 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 SMART SM01130 7 291 9.4E-87 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 SUPERFAMILY SSF51569 3 290 4.5E-76 T 28-03-2018 AL504_RS20210 c192ec672f2aa70075542e6bc71565b6 297 Gene3D G3DSA:3.20.20.70 1 292 1.6E-74 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS20860 e72c2ab55cdfdd4ec6536080847ddff3 446 Gene3D G3DSA:3.40.50.2300 17 147 2.4E-6 T 28-03-2018 AL504_RS20860 e72c2ab55cdfdd4ec6536080847ddff3 446 SUPERFAMILY SSF53822 36 410 1.14E-45 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS20860 e72c2ab55cdfdd4ec6536080847ddff3 446 Pfam PF13458 Periplasmic binding protein 34 406 6.4E-77 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS20860 e72c2ab55cdfdd4ec6536080847ddff3 446 Gene3D G3DSA:3.40.50.2300 158 444 9.7E-21 T 28-03-2018 AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 Gene3D G3DSA:3.40.50.980 214 362 2.0E-40 T 28-03-2018 AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 Gene3D G3DSA:3.40.50.980 35 213 6.8E-35 T 28-03-2018 AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 Gene3D G3DSA:3.30.300.30 445 546 1.6E-28 T 28-03-2018 AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 Pfam PF00501 AMP-binding enzyme 50 449 1.5E-73 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 Gene3D G3DSA:2.30.38.10 363 442 6.5E-13 T 28-03-2018 AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 SUPERFAMILY SSF56801 29 545 3.53E-134 T 28-03-2018 AL504_RS16010 4454311d48ae5357293399bd6e280fd8 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 536 2.9E-23 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 14 176 1.6E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 Gene3D G3DSA:3.40.50.1000 54 217 8.6E-19 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 SUPERFAMILY SSF56784 11 212 1.76E-33 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 183 1.7E-11 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 4.1E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 4.1E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 4.1E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS14460 dbf633f0834f708c079d63e4b1a63d53 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 4.1E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SUPERFAMILY SSF48452 124 191 3.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SUPERFAMILY SSF48452 32 83 3.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 348 399 2.5E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF07721 Tetratricopeptide repeat 354 375 0.51 T 28-03-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF07721 Tetratricopeptide repeat 610 627 0.69 T 28-03-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SUPERFAMILY SSF48452 689 813 4.55E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SUPERFAMILY SSF48452 462 565 4.55E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 450 681 4.7E-23 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 324 350 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 490 510 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 407 427 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 210 232 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 1200 1221 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 145 157 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 1160 1184 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 PRINTS PR01441 Cellulose synthase subunit C signature 34 54 6.7E-23 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF13432 Tetratricopeptide repeat 31 84 7.6E-5 T 28-03-2018 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF13432 Tetratricopeptide repeat 276 336 6.0E-4 T 28-03-2018 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 950 1295 7.6E-115 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF14559 Tetratricopeptide repeat 694 755 1.1E-8 T 28-03-2018 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF14559 Tetratricopeptide repeat 398 457 3.3E-7 T 28-03-2018 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF14559 Tetratricopeptide repeat 469 527 4.2E-7 T 28-03-2018 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 735 933 2.6E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 235 347 6.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 126 218 0.0097 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Pfam PF13176 Tetratricopeptide repeat 790 812 0.013 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SUPERFAMILY SSF48452 116 144 1.59E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SUPERFAMILY SSF48452 271 527 1.59E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 15 125 8.2E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 400 446 9.2E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 Gene3D G3DSA:1.25.40.10 683 734 3.1E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 271 304 38.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 110 143 190.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 716 749 19.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 350 383 44.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 457 490 130.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 784 817 10.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 305 338 340.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 750 783 110.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 26 59 60.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS19870 60d16a9d6d6526034cda9920742e2fa1 1315 SMART SM00028 384 417 4.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS29525 f39a62de790296546e7fffc8319191e4 217 Pfam PF03006 Haemolysin-III related 10 206 2.8E-40 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AL504_RS29525 f39a62de790296546e7fffc8319191e4 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 12 212 7.2E-60 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AL504_RS06850 a830428ad179bf87525410c2bc848746 176 SUPERFAMILY SSF52833 3 128 5.51E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS06850 a830428ad179bf87525410c2bc848746 176 Gene3D G3DSA:3.40.30.10 17 140 1.5E-18 T 28-03-2018 AL504_RS06850 a830428ad179bf87525410c2bc848746 176 Pfam PF00578 AhpC/TSA family 33 114 6.2E-14 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS12460 a8fc2c36285d7fc81c4bfb505f058b1d 658 Pfam PF14247 Putative metallopeptidase 217 359 9.0E-28 T 28-03-2018 IPR025644 Putative metallopeptidase AL504_RS12460 a8fc2c36285d7fc81c4bfb505f058b1d 658 Pfam PF14247 Putative metallopeptidase 408 458 2.7E-11 T 28-03-2018 IPR025644 Putative metallopeptidase AL504_RS12460 a8fc2c36285d7fc81c4bfb505f058b1d 658 SUPERFAMILY SSF52821 535 651 2.1E-9 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS12460 a8fc2c36285d7fc81c4bfb505f058b1d 658 Gene3D G3DSA:3.40.250.10 520 658 1.2E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS12230 bb7de80c40d55883eb5a1b7dc3e212cb 182 SUPERFAMILY SSF56925 29 182 3.14E-11 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS12230 bb7de80c40d55883eb5a1b7dc3e212cb 182 PIRSF PIRSF029681 1 182 1.1E-52 T 28-03-2018 IPR018550 Lipid A 3-O-deacylase-related AL504_RS12230 bb7de80c40d55883eb5a1b7dc3e212cb 182 Gene3D G3DSA:2.40.160.20 26 182 5.5E-34 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS12230 bb7de80c40d55883eb5a1b7dc3e212cb 182 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 59 180 4.3E-32 T 28-03-2018 IPR018550 Lipid A 3-O-deacylase-related AL504_RS16640 d94ab05f63b90ac3935764969a4be9ed 83 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 18 32 1.1E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16640 d94ab05f63b90ac3935764969a4be9ed 83 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 48 60 1.1E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16640 d94ab05f63b90ac3935764969a4be9ed 83 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 32 48 1.1E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16640 d94ab05f63b90ac3935764969a4be9ed 83 Gene3D G3DSA:1.10.10.10 6 81 3.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16640 d94ab05f63b90ac3935764969a4be9ed 83 SUPERFAMILY SSF46894 6 78 5.44E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS16640 d94ab05f63b90ac3935764969a4be9ed 83 Pfam PF00196 Bacterial regulatory proteins, luxR family 17 72 3.5E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16640 d94ab05f63b90ac3935764969a4be9ed 83 SMART SM00421 15 72 4.5E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 54 64 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 Gene3D G3DSA:3.10.290.10 322 409 1.1E-19 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 Pfam PF00579 tRNA synthetases class I (W and Y) 45 328 2.5E-73 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 Gene3D G3DSA:1.10.240.10 231 321 4.0E-27 T 28-03-2018 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 223 235 1.4E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 173 188 1.4E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 58 80 1.4E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 190 212 1.4E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 SUPERFAMILY SSF55174 309 406 2.62E-19 T 28-03-2018 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 10 407 48.017 T 28-03-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 13 407 7.9E-120 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 SUPERFAMILY SSF52374 18 328 2.11E-89 T 28-03-2018 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 SMART SM00363 347 408 4.4E-5 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 Gene3D G3DSA:3.40.50.620 7 230 3.2E-57 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS15570 bd6c0724a7ba3999cfbf9e85ae38fe24 409 Pfam PF01479 S4 domain 349 391 1.3E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS22900 9e66f65514f3df4a1c0941b0b9bd86f6 271 Gene3D G3DSA:3.40.50.2300 3 138 1.4E-9 T 28-03-2018 AL504_RS22900 9e66f65514f3df4a1c0941b0b9bd86f6 271 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 234 1.6E-7 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS22900 9e66f65514f3df4a1c0941b0b9bd86f6 271 SUPERFAMILY SSF46894 150 236 2.38E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS22900 9e66f65514f3df4a1c0941b0b9bd86f6 271 SMART SM00862 157 234 1.5E-7 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS22900 9e66f65514f3df4a1c0941b0b9bd86f6 271 Gene3D G3DSA:1.10.10.10 139 238 2.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22900 9e66f65514f3df4a1c0941b0b9bd86f6 271 SUPERFAMILY SSF52172 19 123 8.68E-10 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS07570 455c130986df7ea47d68272d4cf4a3a3 208 Pfam PF00005 ABC transporter 18 160 4.3E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS07570 455c130986df7ea47d68272d4cf4a3a3 208 Gene3D G3DSA:3.40.50.300 1 199 1.4E-39 T 28-03-2018 AL504_RS07570 455c130986df7ea47d68272d4cf4a3a3 208 SMART SM00382 26 204 0.0019 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07570 455c130986df7ea47d68272d4cf4a3a3 208 SUPERFAMILY SSF52540 2 190 3.84E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07570 455c130986df7ea47d68272d4cf4a3a3 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 202 5.6E-61 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AL504_RS05485 d4ae429c3a181d5243e22051b01edd11 226 Pfam PF01965 DJ-1/PfpI family 25 222 2.1E-16 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS05485 d4ae429c3a181d5243e22051b01edd11 226 Gene3D G3DSA:3.40.50.880 1 226 7.3E-63 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS05485 d4ae429c3a181d5243e22051b01edd11 226 SUPERFAMILY SSF52317 2 224 8.52E-76 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 Pfam PF00498 FHA domain 23 86 1.9E-11 T 28-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 Gene3D G3DSA:2.60.200.20 2 95 6.9E-16 T 28-03-2018 AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 SUPERFAMILY SSF49879 17 92 1.09E-17 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 Pfam PF00437 Type II/IV secretion system protein 200 476 3.1E-81 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 SMART SM00240 21 71 7.1E-8 T 28-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 Gene3D G3DSA:3.40.50.300 302 511 3.1E-17 T 28-03-2018 AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 Gene3D G3DSA:3.30.450.90 195 299 1.4E-35 T 28-03-2018 AL504_RS08690 40e531a0de6591262924a8f8441145c7 553 SUPERFAMILY SSF52540 187 482 7.18E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS24790 521d3f424620cc14faba09b827694941 337 Pfam PF16220 Domain of unknown function (DUF4880) 27 67 1.4E-10 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS24790 521d3f424620cc14faba09b827694941 337 Gene3D G3DSA:2.60.120.10 118 301 9.3E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS24790 521d3f424620cc14faba09b827694941 337 Pfam PF04773 FecR protein 129 222 1.7E-18 T 28-03-2018 IPR006860 FecR protein AL504_RS24790 521d3f424620cc14faba09b827694941 337 PIRSF PIRSF018266 16 336 1.1E-88 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 Pfam PF00199 Catalase 8 388 3.0E-196 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 SUPERFAMILY SSF56634 3 480 2.75E-221 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 PIRSF PIRSF038928 1 481 1.1E-228 T 28-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 PRINTS PR00067 Catalase signature 21 44 8.4E-77 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 PRINTS PR00067 Catalase signature 124 142 8.4E-77 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 PRINTS PR00067 Catalase signature 321 347 8.4E-77 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 PRINTS PR00067 Catalase signature 289 316 8.4E-77 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 PRINTS PR00067 Catalase signature 84 102 8.4E-77 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 PRINTS PR00067 Catalase signature 105 122 8.4E-77 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 SMART SM01060 8 392 3.0E-298 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 Gene3D G3DSA:2.40.180.10 1 358 2.0E-170 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS19370 0acc43f36c86af2f5bf5d1fcb3338809 481 Pfam PF06628 Catalase-related immune-responsive 418 477 1.2E-23 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 227 248 110.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 249 270 990.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 108 137 560.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 138 159 41.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 86 107 24.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 56 84 1100.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 182 203 3200.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 204 226 840.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 272 325 3400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00710 160 181 490.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 Pfam PF05048 Periplasmic copper-binding protein (NosD) 115 340 6.5E-59 T 28-03-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SUPERFAMILY SSF51126 1 366 7.92E-76 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 1 377 5.9E-146 T 28-03-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00722 164 324 2.7E-22 T 28-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 SMART SM00722 8 158 4.1E-15 T 28-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 Gene3D G3DSA:2.160.20.10 232 353 3.8E-13 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS28035 68884653ebf5a8af4c28fe351af672ec 390 Gene3D G3DSA:2.160.20.10 1 231 1.1E-41 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 ProSitePatterns PS01176 Initiation factor 2 signature. 967 989 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 SUPERFAMILY SSF46955 4 51 3.84E-9 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Gene3D G3DSA:2.40.30.10 917 1015 8.4E-27 T 28-03-2018 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Pfam PF11987 Translation-initiation factor 2 802 906 1.9E-36 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Gene3D G3DSA:3.30.56.50 5 46 1.3E-11 T 28-03-2018 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Gene3D G3DSA:3.30.56.50 443 484 6.4E-11 T 28-03-2018 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 1014 17.332 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 7.0E-9 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 440 490 3.9E-15 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 97 3.2E-15 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 SUPERFAMILY SSF52540 512 686 1.57E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 521 676 1.1E-31 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 SUPERFAMILY SSF50447 690 772 6.65E-25 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Pfam PF00009 Elongation factor Tu GTP binding domain 522 677 1.9E-34 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Gene3D G3DSA:3.40.50.300 513 680 4.0E-40 T 28-03-2018 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 434 1016 1.2E-251 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 SUPERFAMILY SSF50447 918 1014 7.69E-32 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Gene3D G3DSA:3.40.50.10050 814 895 1.6E-27 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 SUPERFAMILY SSF52156 795 923 3.4E-37 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL504_RS11070 ebe77e2b766b38c145973c7921d815a5 1016 Gene3D G3DSA:2.40.30.10 681 783 5.1E-15 T 28-03-2018 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 SMART SM00490 244 325 6.4E-25 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 SMART SM00956 405 512 1.2E-48 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Pfam PF09382 RQC domain 400 516 6.1E-38 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 SMART SM00487 15 211 5.9E-28 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Pfam PF16124 RecQ zinc-binding 337 398 8.2E-17 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Pfam PF00271 Helicase conserved C-terminal domain 218 324 3.7E-15 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 SUPERFAMILY SSF47819 535 606 2.07E-21 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Gene3D G3DSA:1.10.10.10 397 526 6.6E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Pfam PF00270 DEAD/DEAH box helicase 22 180 2.9E-17 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 SUPERFAMILY SSF52540 5 190 1.81E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 SUPERFAMILY SSF52540 201 452 3.4E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 461 3.2E-151 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Gene3D G3DSA:3.40.50.300 203 396 5.4E-43 T 28-03-2018 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 9 604 1.6E-241 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Pfam PF00570 HRDC domain 539 602 4.5E-22 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 SMART SM00341 534 607 3.6E-10 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Gene3D G3DSA:3.40.50.300 3 201 5.0E-31 T 28-03-2018 AL504_RS13775 3bcf0fefed0f69a46d91fc312029caf2 609 Gene3D G3DSA:1.10.150.80 527 608 7.0E-23 T 28-03-2018 AL504_RS02430 875dab77aa31b998629386aed73eb009 476 SUPERFAMILY SSF51905 70 297 3.84E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS02430 875dab77aa31b998629386aed73eb009 476 SUPERFAMILY SSF51905 392 447 3.84E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS02430 875dab77aa31b998629386aed73eb009 476 Pfam PF01266 FAD dependent oxidoreductase 71 431 6.0E-48 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS02430 875dab77aa31b998629386aed73eb009 476 Gene3D G3DSA:3.50.50.60 40 145 4.3E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS02430 875dab77aa31b998629386aed73eb009 476 Gene3D G3DSA:3.30.9.10 146 391 3.5E-33 T 28-03-2018 AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 513 2.2E-42 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 510 4.2E-42 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 Gene3D G3DSA:3.30.450.20 161 277 6.8E-18 T 28-03-2018 AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 SUPERFAMILY SSF103190 185 261 2.0E-15 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 Gene3D G3DSA:3.30.450.20 78 160 3.8E-11 T 28-03-2018 AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 Gene3D G3DSA:3.30.70.270 351 515 4.4E-53 T 28-03-2018 AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 Pfam PF02743 Cache domain 37 262 7.4E-24 T 28-03-2018 IPR033479 Double Cache domain 1 AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 SUPERFAMILY SSF103190 79 171 1.41E-7 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 SUPERFAMILY SSF55073 365 514 1.02E-46 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS04015 c34047d0624d664a644041fb50f93fca 517 SMART SM00267 349 514 2.6E-57 T 28-03-2018 IPR000160 GGDEF domain AL504_RS00200 42471c5849e230f1f2551d0e6455aedf 252 SUPERFAMILY SSF52540 2 225 5.32E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00200 42471c5849e230f1f2551d0e6455aedf 252 Pfam PF00005 ABC transporter 18 164 5.6E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS00200 42471c5849e230f1f2551d0e6455aedf 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS00200 42471c5849e230f1f2551d0e6455aedf 252 Gene3D G3DSA:3.40.50.300 1 233 3.3E-64 T 28-03-2018 AL504_RS00200 42471c5849e230f1f2551d0e6455aedf 252 SMART SM00382 26 213 1.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS25220 f0e25fe664e61fafe5393388b7d1dc6f 620 Gene3D G3DSA:2.60.120.260 26 172 3.4E-8 T 28-03-2018 IPR008979 Galactose-binding domain-like AL504_RS25220 f0e25fe664e61fafe5393388b7d1dc6f 620 Gene3D G3DSA:3.30.565.10 477 620 1.8E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25220 f0e25fe664e61fafe5393388b7d1dc6f 620 Pfam PF07730 Histidine kinase 418 468 9.5E-5 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL504_RS25220 f0e25fe664e61fafe5393388b7d1dc6f 620 Pfam PF07695 7TM diverse intracellular signalling 183 355 1.0E-8 T 28-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AL504_RS25220 f0e25fe664e61fafe5393388b7d1dc6f 620 SUPERFAMILY SSF55874 482 602 5.88E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25220 f0e25fe664e61fafe5393388b7d1dc6f 620 SMART SM00387 518 615 6.0E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS26095 bf2ece237090871946f1297ce83038c0 518 Gene3D G3DSA:3.40.50.970 311 518 3.8E-29 T 28-03-2018 AL504_RS26095 bf2ece237090871946f1297ce83038c0 518 SUPERFAMILY SSF52518 342 518 9.65E-37 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS26095 bf2ece237090871946f1297ce83038c0 518 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 515 4.1E-23 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS26095 bf2ece237090871946f1297ce83038c0 518 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 169 5.8E-34 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS26095 bf2ece237090871946f1297ce83038c0 518 Gene3D G3DSA:3.40.50.970 1 182 6.5E-38 T 28-03-2018 AL504_RS26095 bf2ece237090871946f1297ce83038c0 518 SUPERFAMILY SSF52518 1 172 5.4E-39 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 744 804 1.1E-29 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Pfam PF00204 DNA gyrase B 231 404 1.5E-57 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 182 1.8E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Gene3D G3DSA:3.40.50.670 415 811 5.2E-104 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 SMART SM00433 44 808 6.1E-260 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 SMART SM00387 40 186 4.3E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 11 815 98.791 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 14 815 2.4E-294 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 206 219 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 326 342 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 768 780 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 14 24 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 230 252 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 256 274 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 374 388 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 784 800 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 191 206 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 484 493 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR01159 DNA gyrase subunit B signature 388 408 3.0E-76 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 434 448 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 747 763 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 538 550 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 282 295 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 44 59 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 518 535 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 124 138 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 500 516 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 PRINTS PR00418 DNA topoisomerase II family signature 79 92 4.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Pfam PF01751 Toprim domain 433 544 3.0E-17 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Gene3D G3DSA:3.30.230.10 235 406 1.7E-60 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 Gene3D G3DSA:3.30.565.10 15 234 2.0E-73 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 ProSitePatterns PS00177 DNA topoisomerase II signature. 436 444 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 SUPERFAMILY SSF56719 408 573 3.14E-84 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 SUPERFAMILY SSF56719 741 806 3.14E-84 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 SUPERFAMILY SSF55874 14 226 1.28E-68 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19335 d60ffb9f82fb983312ff2aa18b0ef4f6 815 SUPERFAMILY SSF54211 231 406 1.33E-55 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 SUPERFAMILY SSF46785 5 87 1.06E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 Gene3D G3DSA:1.10.10.10 1 92 5.5E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 Gene3D G3DSA:3.40.190.10 187 269 3.7E-10 T 28-03-2018 AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 SUPERFAMILY SSF53850 91 296 2.35E-31 T 28-03-2018 AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 Pfam PF03466 LysR substrate binding domain 96 298 2.0E-14 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 Gene3D G3DSA:3.40.190.10 98 186 3.4E-8 T 28-03-2018 AL504_RS23230 1605bae2a889d98bc7cb5d0ba1e00caa 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.4E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01465 50dae38d33ec7913b4022929175702ae 591 Pfam PF00732 GMC oxidoreductase 233 345 1.4E-11 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS01465 50dae38d33ec7913b4022929175702ae 591 Pfam PF05199 GMC oxidoreductase 448 571 1.1E-21 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL504_RS01465 50dae38d33ec7913b4022929175702ae 591 SUPERFAMILY SSF51905 521 582 4.27E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01465 50dae38d33ec7913b4022929175702ae 591 SUPERFAMILY SSF51905 5 341 4.27E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01465 50dae38d33ec7913b4022929175702ae 591 SUPERFAMILY SSF54373 433 492 5.1E-6 T 28-03-2018 AL504_RS01465 50dae38d33ec7913b4022929175702ae 591 Gene3D G3DSA:3.50.50.60 2 587 7.4E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 SUPERFAMILY SSF54913 2 112 3.81E-45 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 PRINTS PR00340 P-II protein signature 23 41 4.4E-45 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 PRINTS PR00340 P-II protein signature 52 75 4.4E-45 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 PRINTS PR00340 P-II protein signature 2 17 4.4E-45 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 PRINTS PR00340 P-II protein signature 83 103 4.4E-45 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 SMART SM00938 4 105 3.7E-68 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.8E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 PIRSF PIRSF039144 1 112 9.8E-55 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS06870 1b7c73db06952c43f245f46d59e98d64 112 Gene3D G3DSA:3.30.70.120 1 108 2.0E-49 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL504_RS02990 d64e36aa89bf4d356caecc38616a6c2a 283 SUPERFAMILY SSF52540 16 252 1.14E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS02990 d64e36aa89bf4d356caecc38616a6c2a 283 Pfam PF00005 ABC transporter 32 182 5.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS02990 d64e36aa89bf4d356caecc38616a6c2a 283 Gene3D G3DSA:3.40.50.300 12 271 1.6E-72 T 28-03-2018 AL504_RS02990 d64e36aa89bf4d356caecc38616a6c2a 283 PIRSF PIRSF039085 13 258 1.6E-99 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS02990 d64e36aa89bf4d356caecc38616a6c2a 283 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS02990 d64e36aa89bf4d356caecc38616a6c2a 283 SMART SM00382 41 247 4.1E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17965 58cf81441e5ca967756cf0566d7a1e01 265 SUPERFAMILY SSF52540 6 240 4.7E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17965 58cf81441e5ca967756cf0566d7a1e01 265 Pfam PF00005 ABC transporter 35 177 2.8E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17965 58cf81441e5ca967756cf0566d7a1e01 265 SMART SM00382 44 224 6.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17965 58cf81441e5ca967756cf0566d7a1e01 265 Gene3D G3DSA:3.40.50.300 1 265 3.7E-63 T 28-03-2018 AL504_RS17965 58cf81441e5ca967756cf0566d7a1e01 265 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS22530 96e8b6adeb1405117ddbad4480766a92 407 SUPERFAMILY SSF53822 36 406 1.03E-88 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS22530 96e8b6adeb1405117ddbad4480766a92 407 Gene3D G3DSA:3.40.50.2300 167 314 3.0E-33 T 28-03-2018 AL504_RS22530 96e8b6adeb1405117ddbad4480766a92 407 Pfam PF13458 Periplasmic binding protein 36 371 1.7E-88 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS22530 96e8b6adeb1405117ddbad4480766a92 407 Gene3D G3DSA:3.40.50.2300 32 166 3.3E-10 T 28-03-2018 AL504_RS06325 85040bf20f69ade814c9ebbdb5a41663 247 PRINTS PR01003 Flagellar assembly protein FliH signature 198 214 2.4E-15 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL504_RS06325 85040bf20f69ade814c9ebbdb5a41663 247 PRINTS PR01003 Flagellar assembly protein FliH signature 215 240 2.4E-15 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL504_RS06325 85040bf20f69ade814c9ebbdb5a41663 247 PRINTS PR01003 Flagellar assembly protein FliH signature 129 146 2.4E-15 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL504_RS06325 85040bf20f69ade814c9ebbdb5a41663 247 PRINTS PR01003 Flagellar assembly protein FliH signature 67 89 2.4E-15 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL504_RS06325 85040bf20f69ade814c9ebbdb5a41663 247 PRINTS PR01003 Flagellar assembly protein FliH signature 170 197 2.4E-15 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL504_RS06325 85040bf20f69ade814c9ebbdb5a41663 247 PRINTS PR01003 Flagellar assembly protein FliH signature 90 108 2.4E-15 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL504_RS06325 85040bf20f69ade814c9ebbdb5a41663 247 Pfam PF02108 Flagellar assembly protein FliH 107 233 2.0E-38 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 SMART SM00388 443 506 1.1E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 665 1.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 1.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 1.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 1.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 SMART SM00448 694 806 2.3E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 444 501 1.2E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 SUPERFAMILY SSF55874 496 670 1.57E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 SUPERFAMILY SSF52172 692 816 1.31E-23 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Pfam PF00072 Response regulator receiver domain 696 805 8.6E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Pfam PF07696 7TMR-DISM extracellular 2 49 178 4.6E-22 T 28-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Gene3D G3DSA:3.30.565.10 489 667 1.8E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Gene3D G3DSA:1.10.287.130 430 488 9.8E-15 T 28-03-2018 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Gene3D G3DSA:3.40.50.2300 688 880 1.8E-21 T 28-03-2018 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Pfam PF07695 7TM diverse intracellular signalling 191 368 1.9E-14 T 28-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 SMART SM00387 552 668 4.7E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 SUPERFAMILY SSF47384 429 501 1.65E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00640 6383d7905d6e7a0dbe0b1b117758536a 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 667 2.0E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 Gene3D G3DSA:3.30.70.120 1 109 3.4E-47 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 PIRSF PIRSF039144 1 112 4.5E-52 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 SUPERFAMILY SSF54913 1 112 1.43E-43 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 SMART SM00938 4 105 1.9E-63 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 PRINTS PR00340 P-II protein signature 52 75 5.8E-42 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 PRINTS PR00340 P-II protein signature 2 17 5.8E-42 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 PRINTS PR00340 P-II protein signature 83 103 5.8E-42 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 PRINTS PR00340 P-II protein signature 23 41 5.8E-42 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS08380 b54efe164e8566c46a00208727c93bee 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.6E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 Gene3D G3DSA:3.40.50.2300 3 124 1.4E-35 T 28-03-2018 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 Pfam PF00072 Response regulator receiver domain 5 117 7.1E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 SUPERFAMILY SSF46894 123 226 2.83E-31 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.5E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 Gene3D G3DSA:1.10.10.10 125 231 1.9E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.9E-113 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 SMART SM00448 3 116 2.2E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 SMART SM00862 148 225 2.3E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS16475 0b849af4e7053fc888d9387098301c3b 232 SUPERFAMILY SSF52172 3 126 6.97E-43 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 465 56.365 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 Gene3D G3DSA:2.40.10.170 1 80 6.3E-28 T 28-03-2018 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 Gene3D G3DSA:1.10.1140.10 353 463 4.5E-44 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 SUPERFAMILY SSF52540 82 352 3.78E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 SUPERFAMILY SSF47917 350 465 3.92E-54 T 28-03-2018 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 78 3.0E-18 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 SMART SM00382 147 324 0.0037 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 465 4.3E-249 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 338 347 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 347 4.0E-64 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 Gene3D G3DSA:3.40.50.300 81 352 2.3E-90 T 28-03-2018 AL504_RS16915 b42e2b28be4d9c92100ec8e16cf8243e 466 SUPERFAMILY SSF50615 3 80 2.17E-24 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 TIGRFAM TIGR01707 gspI: type II secretion system protein I 19 115 2.1E-18 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 SUPERFAMILY SSF54523 52 127 1.52E-11 T 28-03-2018 AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 Pfam PF02501 Type II secretion system (T2SS), protein I 53 130 2.6E-17 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 40 6.7E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 SUPERFAMILY SSF54523 20 65 9.42E-6 T 28-03-2018 AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 40 1.3E-11 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06815 6c22d24db0c68e5aee1711d659f6488c 134 Gene3D G3DSA:3.30.1300.30 46 131 1.4E-17 T 28-03-2018 AL504_RS13885 fe9d78099fef8ede2b784acaf10744d0 523 Gene3D G3DSA:3.90.76.10 33 174 4.1E-34 T 28-03-2018 AL504_RS13885 fe9d78099fef8ede2b784acaf10744d0 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 435 6.9E-83 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS13885 fe9d78099fef8ede2b784acaf10744d0 523 Gene3D G3DSA:3.40.190.10 178 284 3.9E-23 T 28-03-2018 AL504_RS13885 fe9d78099fef8ede2b784acaf10744d0 523 SUPERFAMILY SSF53850 17 505 1.56E-122 T 28-03-2018 AL504_RS13885 fe9d78099fef8ede2b784acaf10744d0 523 PIRSF PIRSF002741 8 520 4.4E-88 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS13885 fe9d78099fef8ede2b784acaf10744d0 523 Gene3D G3DSA:3.10.105.10 285 493 1.4E-44 T 28-03-2018 AL504_RS06845 cce623e5b01b3452dc9eec07c9aca934 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 169 1.2E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS06845 cce623e5b01b3452dc9eec07c9aca934 724 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 707 724 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS06845 cce623e5b01b3452dc9eec07c9aca934 724 Gene3D G3DSA:2.40.170.20 178 724 2.1E-44 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS06845 cce623e5b01b3452dc9eec07c9aca934 724 Gene3D G3DSA:2.170.130.10 37 177 6.5E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS06845 cce623e5b01b3452dc9eec07c9aca934 724 SUPERFAMILY SSF56935 326 724 8.61E-77 T 28-03-2018 AL504_RS06845 cce623e5b01b3452dc9eec07c9aca934 724 SUPERFAMILY SSF56935 58 276 8.61E-77 T 28-03-2018 AL504_RS06845 cce623e5b01b3452dc9eec07c9aca934 724 Pfam PF00593 TonB dependent receptor 315 722 9.8E-32 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS15770 e556423972d4c6ef9869b8f770f5c895 313 Pfam PF00294 pfkB family carbohydrate kinase 36 294 1.4E-43 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL504_RS15770 e556423972d4c6ef9869b8f770f5c895 313 SUPERFAMILY SSF53613 3 298 4.37E-64 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS15770 e556423972d4c6ef9869b8f770f5c895 313 Gene3D G3DSA:3.40.1190.20 3 309 9.5E-54 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 Gene3D G3DSA:3.40.50.720 144 248 6.3E-22 T 28-03-2018 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 Gene3D G3DSA:1.10.1060.10 4 143 2.2E-43 T 28-03-2018 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 1.6E-226 T 28-03-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 SUPERFAMILY SSF46548 2 154 4.45E-41 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 469 2.1E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 Gene3D G3DSA:3.50.50.60 418 488 1.2E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 9.3E-21 T 28-03-2018 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 9.3E-21 T 28-03-2018 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 PRINTS PR00419 Adrenodoxin reductase family signature 294 308 9.3E-21 T 28-03-2018 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 SUPERFAMILY SSF51971 142 414 2.82E-64 T 28-03-2018 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 Gene3D G3DSA:3.50.50.60 333 414 0.0011 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 Gene3D G3DSA:3.50.50.60 249 332 5.3E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 130 3.7E-26 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL504_RS17865 4b3cdd3c035616fb0b0d3850fdd6b7b0 488 SUPERFAMILY SSF51971 371 481 4.36E-11 T 28-03-2018 AL504_RS21555 f12474eaf082c345baab07aeeff5b828 263 Gene3D G3DSA:3.20.20.150 1 260 1.9E-54 T 28-03-2018 AL504_RS21555 f12474eaf082c345baab07aeeff5b828 263 PIRSF PIRSF006241 1 260 2.1E-92 T 28-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AL504_RS21555 f12474eaf082c345baab07aeeff5b828 263 SUPERFAMILY SSF51658 1 258 3.45E-80 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL504_RS21555 f12474eaf082c345baab07aeeff5b828 263 Pfam PF01261 Xylose isomerase-like TIM barrel 22 218 8.8E-33 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL504_RS23005 45d3d103e32c74f71eea662a9abd74db 125 Gene3D G3DSA:2.40.50.100 5 125 9.8E-41 T 28-03-2018 AL504_RS23005 45d3d103e32c74f71eea662a9abd74db 125 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL504_RS23005 45d3d103e32c74f71eea662a9abd74db 125 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 6.9E-40 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL504_RS23005 45d3d103e32c74f71eea662a9abd74db 125 Pfam PF01597 Glycine cleavage H-protein 7 122 1.0E-39 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AL504_RS23005 45d3d103e32c74f71eea662a9abd74db 125 SUPERFAMILY SSF51230 3 123 2.36E-39 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS23005 45d3d103e32c74f71eea662a9abd74db 125 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 124 36.266 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL504_RS05260 d8680b10b3fb53b0bd67a1a680f707f7 282 SUPERFAMILY SSF56784 5 222 1.16E-12 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05260 d8680b10b3fb53b0bd67a1a680f707f7 282 Gene3D G3DSA:3.40.50.1000 1 267 9.5E-9 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05260 d8680b10b3fb53b0bd67a1a680f707f7 282 Pfam PF12710 haloacid dehalogenase-like hydrolase 8 210 7.3E-8 T 28-03-2018 AL504_RS28235 939adae68297e05c9e0b1bc6f75e8577 152 Pfam PF00583 Acetyltransferase (GNAT) family 41 137 2.2E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS28235 939adae68297e05c9e0b1bc6f75e8577 152 Gene3D G3DSA:3.40.630.30 87 149 3.9E-15 T 28-03-2018 AL504_RS28235 939adae68297e05c9e0b1bc6f75e8577 152 Gene3D G3DSA:3.40.630.30 1 86 3.0E-12 T 28-03-2018 AL504_RS28235 939adae68297e05c9e0b1bc6f75e8577 152 SUPERFAMILY SSF55729 4 146 2.92E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS16065 0bc4e909153620afe1d201731ebf91fe 266 Gene3D G3DSA:3.40.50.300 1 265 5.4E-53 T 28-03-2018 AL504_RS16065 0bc4e909153620afe1d201731ebf91fe 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 254 1.7E-12 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS16065 0bc4e909153620afe1d201731ebf91fe 266 SUPERFAMILY SSF52540 11 255 3.66E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16065 0bc4e909153620afe1d201731ebf91fe 266 Pfam PF00005 ABC transporter 29 185 3.2E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16065 0bc4e909153620afe1d201731ebf91fe 266 SMART SM00382 37 257 4.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 543 782 1.7E-63 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 8 247 7.4E-57 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Gene3D G3DSA:1.10.4050.10 518 631 4.9E-19 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Gene3D G3DSA:1.10.4050.10 4 89 0.0094 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 2 921 18.56 T 28-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Gene3D G3DSA:3.30.460.10 632 788 5.6E-51 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Gene3D G3DSA:3.30.460.10 90 269 6.5E-55 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 SUPERFAMILY SSF81301 517 792 2.07E-73 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 SUPERFAMILY SSF81593 792 920 1.57E-32 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 SUPERFAMILY SSF81301 6 271 1.23E-64 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Gene3D G3DSA:1.20.120.330 789 921 4.0E-36 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 SUPERFAMILY SSF81593 272 427 1.1E-37 T 28-03-2018 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Pfam PF08335 GlnD PII-uridylyltransferase 282 427 2.7E-41 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Pfam PF08335 GlnD PII-uridylyltransferase 804 898 1.6E-10 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL504_RS09335 ac71107b4ea310cec0ee76a3295893c8 921 Gene3D G3DSA:1.20.120.330 270 430 3.0E-44 T 28-03-2018 AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 Gene3D G3DSA:3.40.190.10 106 198 8.4E-10 T 28-03-2018 AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 Gene3D G3DSA:1.10.10.10 12 99 2.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 SUPERFAMILY SSF46785 16 126 8.57E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 Gene3D G3DSA:3.40.190.10 199 287 2.0E-11 T 28-03-2018 AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 Pfam PF03466 LysR substrate binding domain 104 313 3.6E-21 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 SUPERFAMILY SSF53850 107 316 1.25E-21 T 28-03-2018 AL504_RS24960 36c72e748b5f5f00c7952b48bb29b96a 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 77 1.8E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 Pfam PF00561 alpha/beta hydrolase fold 36 293 2.8E-31 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 7 310 1.5E-127 T 28-03-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 PIRSF PIRSF006431 1 313 1.3E-137 T 28-03-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 SUPERFAMILY SSF53474 2 304 2.34E-65 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 Gene3D G3DSA:3.40.50.1820 1 313 8.0E-65 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 35 43 5.6E-14 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 61 72 5.6E-14 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL504_RS22465 a694e2b551bbfe37a7ee1d78b9431dfc 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 105 119 5.6E-14 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL504_RS07590 ef2ed2932c447600a4813c65ca988def 149 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 32.251 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL504_RS07590 ef2ed2932c447600a4813c65ca988def 149 Gene3D G3DSA:2.40.50.140 27 125 4.0E-33 T 28-03-2018 AL504_RS07590 ef2ed2932c447600a4813c65ca988def 149 SUPERFAMILY SSF82093 30 136 2.49E-38 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL504_RS07590 ef2ed2932c447600a4813c65ca988def 149 Pfam PF03100 CcmE 5 130 1.2E-44 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL504_RS10195 25a346d66d6896ce3ed3dbc5c297ddea 146 Gene3D G3DSA:3.40.630.30 8 145 6.2E-34 T 28-03-2018 AL504_RS10195 25a346d66d6896ce3ed3dbc5c297ddea 146 Pfam PF13673 Acetyltransferase (GNAT) domain 47 144 6.7E-21 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS10195 25a346d66d6896ce3ed3dbc5c297ddea 146 SUPERFAMILY SSF55729 9 144 3.19E-36 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 SMART SM00448 1 111 1.5E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 Pfam PF00072 Response regulator receiver domain 3 111 1.1E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 Gene3D G3DSA:3.40.50.2300 1 117 1.7E-34 T 28-03-2018 AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 1.9E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 SUPERFAMILY SSF52172 1 177 6.83E-42 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 1.7E-94 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 Gene3D G3DSA:1.10.10.10 118 226 1.0E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10095 cdd6662c51fb80232484283593cd5b33 228 SMART SM00862 144 219 1.2E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS27020 974703941628eccaaf4b20e5d5d82e2b 323 Pfam PF04392 ABC transporter substrate binding protein 30 321 3.0E-112 T 28-03-2018 IPR007487 ABC transporter, substrate-binding protein AL504_RS27020 974703941628eccaaf4b20e5d5d82e2b 323 Gene3D G3DSA:3.40.50.2300 153 286 1.1E-17 T 28-03-2018 AL504_RS27020 974703941628eccaaf4b20e5d5d82e2b 323 SUPERFAMILY SSF53822 37 284 1.02E-20 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS27020 974703941628eccaaf4b20e5d5d82e2b 323 Gene3D G3DSA:3.40.50.2300 27 152 2.2E-23 T 28-03-2018 AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 SUPERFAMILY SSF46785 15 128 9.98E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 8.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 8.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 8.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 Pfam PF03466 LysR substrate binding domain 104 305 1.2E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 1.8E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 Gene3D G3DSA:3.40.190.10 194 281 2.8E-16 T 28-03-2018 AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 Gene3D G3DSA:1.10.10.10 6 105 5.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 SUPERFAMILY SSF53850 107 309 1.22E-35 T 28-03-2018 AL504_RS04555 4aaddbe5d966b2e4f0827fdd0f6d1fa9 317 Gene3D G3DSA:3.40.190.10 106 193 1.0E-21 T 28-03-2018 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 Pfam PF01411 tRNA synthetases class II (A) 5 552 2.2E-222 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 Pfam PF02272 DHHA1 domain 731 870 2.6E-24 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 202.844 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 SUPERFAMILY SSF55681 2 251 5.96E-108 T 28-03-2018 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 693 9.5E-17 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 SUPERFAMILY SSF101353 252 442 1.44E-59 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 SMART SM00863 651 693 5.5E-20 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 Gene3D G3DSA:3.30.930.10 1 248 1.1E-116 T 28-03-2018 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 SUPERFAMILY SSF50447 451 550 4.57E-18 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 SUPERFAMILY SSF55186 550 708 1.83E-48 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 Gene3D G3DSA:3.30.980.10 551 710 1.3E-41 T 28-03-2018 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 5.8E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 5.8E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 5.8E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 5.8E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL504_RS09215 909607845a74dd3119f02bf15b0d8bf3 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 5.8E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL504_RS06440 a825846e1ea739cff5e3accb31e4047e 489 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 410 488 6.3E-20 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL504_RS06440 a825846e1ea739cff5e3accb31e4047e 489 SUPERFAMILY SSF117143 244 450 2.35E-62 T 28-03-2018 AL504_RS06440 a825846e1ea739cff5e3accb31e4047e 489 SUPERFAMILY SSF117143 73 164 2.35E-62 T 28-03-2018 AL504_RS06440 a825846e1ea739cff5e3accb31e4047e 489 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 471 8.6E-82 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL504_RS06440 a825846e1ea739cff5e3accb31e4047e 489 Pfam PF07559 Flagellar basal body protein FlaE 248 370 3.0E-18 T 28-03-2018 IPR011491 Flagellar hook protein FlgE AL504_RS06440 a825846e1ea739cff5e3accb31e4047e 489 Pfam PF00460 Flagella basal body rod protein 6 33 2.5E-10 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL504_RS06440 a825846e1ea739cff5e3accb31e4047e 489 Gene3D G3DSA:2.60.98.20 141 371 1.6E-23 T 28-03-2018 IPR011491 Flagellar hook protein FlgE AL504_RS24995 040ac53e859680531990ebb4f802250d 816 Gene3D G3DSA:1.25.40.10 132 285 5.9E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS24995 040ac53e859680531990ebb4f802250d 816 SMART SM00248 446 477 3400.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS24995 040ac53e859680531990ebb4f802250d 816 SMART SM00248 710 739 4300.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS24995 040ac53e859680531990ebb4f802250d 816 SMART SM00248 373 402 0.52 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS24995 040ac53e859680531990ebb4f802250d 816 SMART SM00248 481 511 690.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS24995 040ac53e859680531990ebb4f802250d 816 SMART SM00248 577 607 3100.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS24995 040ac53e859680531990ebb4f802250d 816 SUPERFAMILY SSF48452 197 298 2.68E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS24995 040ac53e859680531990ebb4f802250d 816 Gene3D G3DSA:1.25.40.20 286 442 9.1E-16 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS24995 040ac53e859680531990ebb4f802250d 816 SUPERFAMILY SSF48403 344 512 5.18E-20 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS24995 040ac53e859680531990ebb4f802250d 816 Gene3D G3DSA:1.25.40.20 443 759 3.9E-13 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS21895 25f5d98db4f88f00c40d15aff165701d 345 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL504_RS21895 25f5d98db4f88f00c40d15aff165701d 345 Gene3D G3DSA:3.20.20.70 8 336 2.4E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS21895 25f5d98db4f88f00c40d15aff165701d 345 SUPERFAMILY SSF51569 22 328 2.49E-90 T 28-03-2018 AL504_RS21895 25f5d98db4f88f00c40d15aff165701d 345 Pfam PF00682 HMGL-like 33 313 2.0E-68 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL504_RS20195 2d303ed650ca8171714de33262b53b96 308 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 28 305 2.2E-94 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL504_RS20195 2d303ed650ca8171714de33262b53b96 308 Pfam PF01040 UbiA prenyltransferase family 47 293 1.2E-55 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL504_RS20195 2d303ed650ca8171714de33262b53b96 308 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 85 107 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site AL504_RS20195 2d303ed650ca8171714de33262b53b96 308 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 23 306 26.245 T 28-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 SUPERFAMILY SSF52402 7 144 9.21E-27 T 28-03-2018 AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 PRINTS PR01438 Universal stress protein signature 244 256 4.3E-13 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 PRINTS PR01438 Universal stress protein signature 262 284 4.3E-13 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 PRINTS PR01438 Universal stress protein signature 148 166 4.3E-13 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 Pfam PF00582 Universal stress protein family 148 284 3.1E-21 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 Pfam PF00582 Universal stress protein family 8 141 5.8E-24 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 Gene3D G3DSA:3.40.50.620 145 284 5.2E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 Gene3D G3DSA:3.40.50.620 1 144 1.3E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS16580 a4dc2b078e2f1f6ce83245f730effa49 289 SUPERFAMILY SSF52402 146 284 7.95E-25 T 28-03-2018 AL504_RS26520 901592fb7cbd09131a4957fc6b14de7f 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 14 94 4.9E-16 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS26520 901592fb7cbd09131a4957fc6b14de7f 153 Gene3D G3DSA:1.20.1290.10 1 153 4.4E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS26520 901592fb7cbd09131a4957fc6b14de7f 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 76 8.4E-14 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS26520 901592fb7cbd09131a4957fc6b14de7f 153 SUPERFAMILY SSF69118 5 145 1.75E-42 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 SMART SM00382 368 554 1.8E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 Gene3D G3DSA:3.40.50.300 333 580 2.6E-74 T 28-03-2018 AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 Pfam PF00005 ABC transporter 359 508 1.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 SUPERFAMILY SSF52540 339 578 9.35E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 SUPERFAMILY SSF90123 10 326 2.62E-39 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 Gene3D G3DSA:1.20.1560.10 8 332 1.1E-27 T 28-03-2018 AL504_RS24235 8651d45c90f3c916b6867b8dd4f837cc 580 Pfam PF00664 ABC transporter transmembrane region 33 290 2.1E-6 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.3E-37 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 2.3E-37 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 2.3E-37 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 2.3E-37 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.3E-37 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 467 3.4E-144 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 Gene3D G3DSA:3.50.50.60 283 360 1.4E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 Gene3D G3DSA:3.50.50.60 164 282 3.4E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 329 1.1E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PIRSF PIRSF000350 1 461 2.5E-75 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 Gene3D G3DSA:3.30.390.30 361 467 3.9E-33 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 Gene3D G3DSA:3.50.50.60 4 163 2.9E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 SUPERFAMILY SSF55424 347 466 7.04E-32 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 SUPERFAMILY SSF51905 3 339 2.25E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 457 1.8E-28 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.6E-68 T 28-03-2018 AL504_RS06895 6e68faeb191657c5e0d300e5c1a8f637 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.6E-68 T 28-03-2018 AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 SMART SM00345 16 75 2.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 SUPERFAMILY SSF46785 9 79 2.98E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 SUPERFAMILY SSF48008 96 233 1.44E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 Pfam PF07729 FCD domain 99 225 4.4E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.3E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.3E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.6E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 Gene3D G3DSA:1.20.120.530 85 244 4.1E-29 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 Gene3D G3DSA:1.10.10.10 1 77 2.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20175 9ba1d0f656e8d69201202a85bb30d473 252 SMART SM00895 99 226 2.2E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS25165 0e197bd5322271217c00bbfb0054d1bc 333 PIRSF PIRSF018266 16 329 6.6E-85 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS25165 0e197bd5322271217c00bbfb0054d1bc 333 Pfam PF16220 Domain of unknown function (DUF4880) 26 68 6.9E-11 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS25165 0e197bd5322271217c00bbfb0054d1bc 333 Pfam PF04773 FecR protein 123 217 2.0E-17 T 28-03-2018 IPR006860 FecR protein AL504_RS26345 07995f417dc942add697e212fe07b82a 264 Gene3D G3DSA:1.10.3720.10 10 257 2.0E-27 T 28-03-2018 AL504_RS26345 07995f417dc942add697e212fe07b82a 264 SUPERFAMILY SSF161098 59 243 1.44E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26345 07995f417dc942add697e212fe07b82a 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 251 3.1E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 SUPERFAMILY SSF55031 182 295 2.99E-18 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 Pfam PF07687 Peptidase dimerisation domain 179 288 2.0E-20 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 Pfam PF01546 Peptidase family M20/M25/M40 74 385 3.6E-36 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 Gene3D G3DSA:3.30.70.360 185 306 2.8E-23 T 28-03-2018 AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 Gene3D G3DSA:3.40.630.10 1 184 1.7E-32 T 28-03-2018 AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 SUPERFAMILY SSF53187 311 385 9.43E-58 T 28-03-2018 AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 SUPERFAMILY SSF53187 10 181 9.43E-58 T 28-03-2018 AL504_RS24025 ed7a814b633c4e0fe8936edfaf5d3dbb 386 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 16 383 2.3E-107 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL504_RS12805 bd04e0317a272d51d1da4ae65fdc4a47 119 Gene3D G3DSA:1.10.260.40 61 117 3.8E-11 T 28-03-2018 AL504_RS12805 bd04e0317a272d51d1da4ae65fdc4a47 119 SUPERFAMILY SSF47413 62 117 3.1E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS12805 bd04e0317a272d51d1da4ae65fdc4a47 119 Pfam PF01381 Helix-turn-helix 64 117 6.5E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS12805 bd04e0317a272d51d1da4ae65fdc4a47 119 SMART SM00530 62 117 7.3E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 SUPERFAMILY SSF46626 216 303 5.59E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 44 90 1.6E-18 T 28-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 PIRSF PIRSF000006 5 303 1.2E-97 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 Gene3D G3DSA:1.10.760.10 215 322 2.4E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 SUPERFAMILY SSF46626 114 216 9.46E-29 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 SUPERFAMILY SSF46626 64 86 9.46E-29 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 Gene3D G3DSA:1.10.760.10 98 214 5.9E-24 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 42 302 7.4E-76 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 296 8.1E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28135 8cf56dad9b62adc4085d17cc1c364b2f 323 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 136 208 1.9E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS02115 d0ff85fcc9257ded67438a1dbe589686 464 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 360 371 - T 28-03-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AL504_RS02115 d0ff85fcc9257ded67438a1dbe589686 464 Pfam PF13975 gag-polyprotein putative aspartyl protease 350 445 1.4E-20 T 28-03-2018 AL504_RS02115 d0ff85fcc9257ded67438a1dbe589686 464 SUPERFAMILY SSF50630 343 448 1.17E-12 T 28-03-2018 IPR021109 Aspartic peptidase domain AL504_RS02115 d0ff85fcc9257ded67438a1dbe589686 464 SMART SM00028 238 271 6.0E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS02115 d0ff85fcc9257ded67438a1dbe589686 464 Gene3D G3DSA:1.25.40.10 104 299 3.2E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS02115 d0ff85fcc9257ded67438a1dbe589686 464 SUPERFAMILY SSF48452 215 309 7.38E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS02115 d0ff85fcc9257ded67438a1dbe589686 464 Gene3D G3DSA:2.40.70.10 336 450 2.5E-17 T 28-03-2018 IPR021109 Aspartic peptidase domain AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Pfam PF03129 Anticodon binding domain 478 570 4.6E-16 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 574 40.603 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 SUPERFAMILY SSF55826 218 392 1.96E-34 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 PIRSF PIRSF001535 1 576 4.1E-264 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.4E-17 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.4E-17 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.4E-17 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.4E-17 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Gene3D G3DSA:3.40.50.800 462 576 2.2E-30 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 SUPERFAMILY SSF55681 10 237 9.96E-101 T 28-03-2018 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 SUPERFAMILY SSF55681 410 481 9.96E-101 T 28-03-2018 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 1.1E-45 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 6.5E-30 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 SUPERFAMILY SSF52954 467 574 2.13E-29 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 7.1E-222 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Gene3D G3DSA:3.90.960.10 255 389 4.6E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Gene3D G3DSA:3.30.930.10 390 461 1.5E-7 T 28-03-2018 AL504_RS14975 4a95897173cbf5587d0d2fc4d739a790 576 Gene3D G3DSA:3.30.930.10 23 254 1.0E-65 T 28-03-2018 AL504_RS26145 b7aa838e663b6040a0afcbdec5d86568 553 TIGRFAM TIGR03222 benzo_boxC: benzoyl-CoA-dihydrodiol lyase 8 553 2.2E-294 T 28-03-2018 IPR017633 Benzoyl-CoA-dihydrodiol lyase MetaCyc: PWY-1361 AL504_RS26145 b7aa838e663b6040a0afcbdec5d86568 553 Pfam PF00378 Enoyl-CoA hydratase/isomerase 49 238 6.7E-22 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS26145 b7aa838e663b6040a0afcbdec5d86568 553 Gene3D G3DSA:3.90.226.10 266 504 4.0E-26 T 28-03-2018 AL504_RS26145 b7aa838e663b6040a0afcbdec5d86568 553 SUPERFAMILY SSF52096 302 547 2.71E-16 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS26145 b7aa838e663b6040a0afcbdec5d86568 553 Gene3D G3DSA:3.90.226.10 505 553 0.014 T 28-03-2018 AL504_RS26145 b7aa838e663b6040a0afcbdec5d86568 553 Gene3D G3DSA:3.90.226.10 2 265 3.8E-39 T 28-03-2018 AL504_RS26145 b7aa838e663b6040a0afcbdec5d86568 553 SUPERFAMILY SSF52096 15 281 1.27E-32 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 SUPERFAMILY SSF54909 74 144 1.61E-13 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 Gene3D G3DSA:3.30.70.920 62 150 8.0E-17 T 28-03-2018 AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 1.7E-14 T 28-03-2018 AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 SUPERFAMILY SSF46785 11 72 3.06E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 Pfam PF01037 Lrp/AsnC ligand binding domain 78 142 2.5E-12 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 4.7E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 4.7E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 4.7E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 Gene3D G3DSA:1.10.10.10 12 61 3.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02325 ba430dde402bc6f3e809eec5f39f369b 155 SMART SM00344 12 118 7.7E-32 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS24985 9f8b3317b50463bdeefc50c7e6f1bfda 695 Gene3D G3DSA:2.40.170.20 166 692 2.9E-71 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24985 9f8b3317b50463bdeefc50c7e6f1bfda 695 SUPERFAMILY SSF56935 24 693 1.37E-111 T 28-03-2018 AL504_RS24985 9f8b3317b50463bdeefc50c7e6f1bfda 695 Gene3D G3DSA:2.170.130.10 19 158 3.8E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24985 9f8b3317b50463bdeefc50c7e6f1bfda 695 Pfam PF00593 TonB dependent receptor 232 691 4.2E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24985 9f8b3317b50463bdeefc50c7e6f1bfda 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 153 2.0E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03500 174dcb8fde5e3c2515242fce60b64920 364 Gene3D G3DSA:3.40.190.10 145 336 5.5E-23 T 28-03-2018 AL504_RS03500 174dcb8fde5e3c2515242fce60b64920 364 Pfam PF09084 NMT1/THI5 like 65 256 9.9E-16 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS03500 174dcb8fde5e3c2515242fce60b64920 364 Gene3D G3DSA:3.40.190.10 26 144 2.4E-12 T 28-03-2018 AL504_RS03500 174dcb8fde5e3c2515242fce60b64920 364 SUPERFAMILY SSF53850 43 259 1.48E-38 T 28-03-2018 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 Pfam PF11941 Domain of unknown function (DUF3459) 497 577 1.8E-15 T 28-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 Gene3D G3DSA:2.60.40.10 8 99 2.5E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 SUPERFAMILY SSF51445 93 507 1.53E-101 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 PIRSF PIRSF006337 7 593 2.7E-206 T 28-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 Gene3D G3DSA:1.10.10.760 444 477 6.9E-14 T 28-03-2018 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 Gene3D G3DSA:3.20.20.80 216 443 6.5E-30 T 28-03-2018 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 Gene3D G3DSA:3.20.20.80 100 215 3.8E-30 T 28-03-2018 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 Gene3D G3DSA:2.60.40.1180 520 595 5.4E-15 T 28-03-2018 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 20 551 6.4E-197 T 28-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 Pfam PF00128 Alpha amylase, catalytic domain 125 208 1.6E-11 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 SMART SM00642 118 505 1.4E-10 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29045 4b125323abda5aa1ec86bf064f20c5e9 597 SUPERFAMILY SSF81296 10 97 3.92E-12 T 28-03-2018 IPR014756 Immunoglobulin E-set AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 SUPERFAMILY SSF52518 3 175 3.83E-46 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 542 2.4E-25 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 327 6.2E-25 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 SUPERFAMILY SSF52518 363 562 6.97E-50 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 9.0E-47 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 SUPERFAMILY SSF52467 191 355 1.52E-39 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 Gene3D G3DSA:3.40.50.1220 188 349 3.0E-36 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 Gene3D G3DSA:3.40.50.970 350 558 9.8E-36 T 28-03-2018 AL504_RS24300 ac305104f4dbfaaeb9578c711228fa24 589 Gene3D G3DSA:3.40.50.970 2 187 1.1E-46 T 28-03-2018 AL504_RS27785 3b7ad9ccd1492231d0b3e2ebb4894817 328 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 4.2E-11 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS27785 3b7ad9ccd1492231d0b3e2ebb4894817 328 PIRSF PIRSF018266 7 328 1.3E-81 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS27785 3b7ad9ccd1492231d0b3e2ebb4894817 328 Pfam PF04773 FecR protein 118 211 3.9E-22 T 28-03-2018 IPR006860 FecR protein AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 SUPERFAMILY SSF52440 11 107 5.61E-26 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 Pfam PF02222 ATP-grasp domain 120 291 1.5E-44 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 SUPERFAMILY SSF51246 315 390 7.53E-17 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 Gene3D G3DSA:3.30.470.20 188 392 8.1E-43 T 28-03-2018 AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 Gene3D G3DSA:3.30.1490.20 125 187 7.6E-14 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 Gene3D G3DSA:3.40.50.20 14 109 1.7E-22 T 28-03-2018 AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 15 379 7.3E-115 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 376 40.51 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL504_RS26035 8079de6dedf3a757a1557214b3aa179d 396 SUPERFAMILY SSF56059 110 311 1.04E-53 T 28-03-2018 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 SUPERFAMILY SSF51182 12 178 3.38E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 Pfam PF02311 AraC-like ligand binding domain 26 117 3.3E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 SMART SM00342 173 255 2.3E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 SUPERFAMILY SSF46689 213 255 1.0E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 4.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 4.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 Pfam PF12833 Helix-turn-helix domain 179 256 1.0E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 Gene3D G3DSA:1.10.10.60 212 259 9.0E-11 T 28-03-2018 AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 Gene3D G3DSA:2.60.120.10 1 161 1.9E-8 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS27180 a2b5deffe3d1a8e0bb8c729efb4e28c1 259 Gene3D G3DSA:1.10.10.60 162 211 1.2E-12 T 28-03-2018 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.348 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 Pfam PF00164 Ribosomal protein S12/S23 15 123 3.6E-43 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 3.0E-69 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 SUPERFAMILY SSF50249 2 124 1.29E-52 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.1E-61 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.1E-61 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.1E-61 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.1E-61 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.1E-61 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.1E-61 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 Gene3D G3DSA:2.40.50.140 1 125 8.3E-65 T 28-03-2018 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19675 b4927f9ef75b6cea3c5c5f0877090e41 125 PIRSF PIRSF002133 1 124 1.0E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06475 36aa632e57ac1ac59f8b22107d4acf35 970 SMART SM00962 359 554 9.5E-60 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS06475 36aa632e57ac1ac59f8b22107d4acf35 970 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 222 447 6.4E-58 T 28-03-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AL504_RS06475 36aa632e57ac1ac59f8b22107d4acf35 970 SMART SM00382 358 531 2.7E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS06475 36aa632e57ac1ac59f8b22107d4acf35 970 Gene3D G3DSA:3.40.50.300 357 555 1.3E-23 T 28-03-2018 AL504_RS06475 36aa632e57ac1ac59f8b22107d4acf35 970 Pfam PF00448 SRP54-type protein, GTPase domain 361 552 4.0E-36 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS06475 36aa632e57ac1ac59f8b22107d4acf35 970 SUPERFAMILY SSF52540 359 552 1.01E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14545 3ee1d8d91075a0487f19b2e9506fe696 303 Gene3D G3DSA:1.10.10.10 1 90 1.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14545 3ee1d8d91075a0487f19b2e9506fe696 303 Pfam PF03466 LysR substrate binding domain 95 297 1.0E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14545 3ee1d8d91075a0487f19b2e9506fe696 303 SUPERFAMILY SSF46785 7 92 1.63E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14545 3ee1d8d91075a0487f19b2e9506fe696 303 Gene3D G3DSA:3.40.190.10 91 181 7.7E-18 T 28-03-2018 AL504_RS14545 3ee1d8d91075a0487f19b2e9506fe696 303 Gene3D G3DSA:3.40.190.10 182 270 8.7E-20 T 28-03-2018 AL504_RS14545 3ee1d8d91075a0487f19b2e9506fe696 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14545 3ee1d8d91075a0487f19b2e9506fe696 303 SUPERFAMILY SSF53850 95 301 1.02E-36 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 14 646 5.9E-178 T 28-03-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 359 372 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Pfam PF00158 Sigma-54 interaction domain 337 502 7.8E-63 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 206 271 1.6E-6 T 28-03-2018 IPR000014 PAS domain AL504_RS03685 84fc497bc097762088b95fe99e511614 648 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 550 559 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Gene3D G3DSA:3.40.50.2300 6 100 1.1E-18 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 SUPERFAMILY SSF52540 334 567 1.03E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Gene3D G3DSA:1.10.8.60 509 583 2.2E-18 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Pfam PF13188 PAS domain 209 260 3.5E-5 T 28-03-2018 IPR000014 PAS domain AL504_RS03685 84fc497bc097762088b95fe99e511614 648 SMART SM00091 208 275 4.5E-6 T 28-03-2018 IPR000014 PAS domain AL504_RS03685 84fc497bc097762088b95fe99e511614 648 SUPERFAMILY SSF159800 16 198 1.7E-43 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Gene3D G3DSA:1.10.10.10 632 648 0.0033 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Gene3D G3DSA:3.40.50.300 330 508 2.4E-20 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Gene3D G3DSA:3.30.450.20 194 323 1.5E-12 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Pfam PF06506 Propionate catabolism activator 40 203 1.7E-41 T 28-03-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Gene3D G3DSA:1.10.10.60 597 631 1.8E-9 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Gene3D G3DSA:3.40.50.10660 101 181 5.7E-21 T 28-03-2018 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 422 437 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 SUPERFAMILY SSF55785 207 287 5.23E-12 T 28-03-2018 IPR000014 PAS domain AL504_RS03685 84fc497bc097762088b95fe99e511614 648 SUPERFAMILY SSF46689 550 645 1.94E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS03685 84fc497bc097762088b95fe99e511614 648 SMART SM00382 355 500 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03685 84fc497bc097762088b95fe99e511614 648 Pfam PF02954 Bacterial regulatory protein, Fis family 615 644 3.3E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS26050 573b0f2ef7c84cd1f7f2564af2ce0a2b 213 SMART SM00882 8 205 8.2E-66 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS26050 573b0f2ef7c84cd1f7f2564af2ce0a2b 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 46 54 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS26050 573b0f2ef7c84cd1f7f2564af2ce0a2b 213 Gene3D G3DSA:3.40.1080.10 5 212 6.7E-57 T 28-03-2018 AL504_RS26050 573b0f2ef7c84cd1f7f2564af2ce0a2b 213 Pfam PF01144 Coenzyme A transferase 9 201 8.6E-38 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS26050 573b0f2ef7c84cd1f7f2564af2ce0a2b 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 6 210 8.9E-87 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AL504_RS26050 573b0f2ef7c84cd1f7f2564af2ce0a2b 213 SUPERFAMILY SSF100950 7 211 1.16E-61 T 28-03-2018 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 SUPERFAMILY SSF89095 301 407 4.32E-31 T 28-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 148 162 - T 28-03-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 SMART SM00845 332 483 3.4E-77 T 28-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 Pfam PF02637 GatB domain 333 483 2.6E-51 T 28-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 Pfam PF02934 GatB/GatE catalytic domain 5 293 2.2E-110 T 28-03-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 SUPERFAMILY SSF55931 4 300 1.24E-118 T 28-03-2018 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 Gene3D G3DSA:1.10.10.410 423 484 1.6E-23 T 28-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 483 8.8E-165 T 28-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AL504_RS20975 a1493f0c62daafe4b695aebb5e054d7f 485 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 484 37.892 T 28-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AL504_RS00695 ad9a28045e3de83fa3f5a216142fc3df 482 Gene3D G3DSA:1.20.1250.20 267 480 1.0E-18 T 28-03-2018 AL504_RS00695 ad9a28045e3de83fa3f5a216142fc3df 482 Gene3D G3DSA:1.20.1250.20 19 210 1.1E-32 T 28-03-2018 AL504_RS00695 ad9a28045e3de83fa3f5a216142fc3df 482 Pfam PF07690 Major Facilitator Superfamily 29 419 2.9E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS00695 ad9a28045e3de83fa3f5a216142fc3df 482 SUPERFAMILY SSF103473 258 470 3.66E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS00695 ad9a28045e3de83fa3f5a216142fc3df 482 SUPERFAMILY SSF103473 12 210 3.66E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 Pfam PF00691 OmpA family 162 256 7.3E-25 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 SUPERFAMILY SSF103088 153 261 1.31E-34 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 245 264 2.0E-6 T 28-03-2018 AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 225 244 2.0E-6 T 28-03-2018 AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 207 224 2.0E-6 T 28-03-2018 AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 Pfam PF04972 BON domain 28 71 9.0E-4 T 28-03-2018 IPR007055 BON domain AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 Gene3D G3DSA:3.30.1330.60 87 264 7.4E-40 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 PRINTS PR01021 OMPA domain signature 192 207 9.4E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 PRINTS PR01021 OMPA domain signature 162 184 9.4E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS01825 e0a19fc4d3476be7c59e500e78a3e234 264 PRINTS PR01021 OMPA domain signature 207 223 9.4E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 Gene3D G3DSA:3.30.450.40 64 144 9.6E-12 T 28-03-2018 IPR029016 GAF domain-like AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 Pfam PF01614 Bacterial transcriptional regulator 152 206 4.5E-8 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 SUPERFAMILY SSF46785 2 71 2.86E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 Pfam PF09339 IclR helix-turn-helix domain 2 48 8.0E-10 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 SUPERFAMILY SSF55781 56 208 3.43E-25 T 28-03-2018 IPR029016 GAF domain-like AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 Gene3D G3DSA:1.10.10.10 1 61 1.5E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 SMART SM00346 1 88 7.9E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS23885 f274617a60049748bcdbfe108aa23af1 230 Gene3D G3DSA:3.30.450.40 145 214 4.1E-11 T 28-03-2018 IPR029016 GAF domain-like AL504_RS14390 279cced5933f9eda43dcef9eff302cef 409 Pfam PF07670 Nucleoside recognition 276 379 1.8E-5 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL504_RS14390 279cced5933f9eda43dcef9eff302cef 409 Pfam PF07670 Nucleoside recognition 52 158 1.4E-8 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL504_RS14390 279cced5933f9eda43dcef9eff302cef 409 PIRSF PIRSF036542 1 409 6.1E-209 T 28-03-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 Gene3D G3DSA:1.20.1640.10 278 501 6.6E-44 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 Gene3D G3DSA:3.30.70.1430 554 644 7.9E-6 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 Gene3D G3DSA:3.30.2090.10 700 786 3.5E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82866 288 489 2.22E-43 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 1.2E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 Pfam PF00873 AcrB/AcrD/AcrF family 1 1007 2.3E-291 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82693 38 132 1.17E-21 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 Gene3D G3DSA:3.30.70.1430 38 140 2.0E-24 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82866 792 1011 4.05E-40 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82693 552 642 3.4E-10 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82714 181 264 1.31E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82714 702 786 2.22E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82693 135 180 3.4E-19 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 SUPERFAMILY SSF82693 266 322 3.4E-19 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 Gene3D G3DSA:1.20.1640.10 805 1010 8.4E-33 T 28-03-2018 AL504_RS02635 eb301b327514e772a7b68726142ab6a2 1022 Gene3D G3DSA:3.30.2090.10 179 267 1.0E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16815 97b224a02ed20deb2f98713d8e04722a 478 Gene3D G3DSA:3.30.70.360 216 375 1.9E-29 T 28-03-2018 AL504_RS16815 97b224a02ed20deb2f98713d8e04722a 478 Gene3D G3DSA:3.40.630.10 16 215 9.4E-25 T 28-03-2018 AL504_RS16815 97b224a02ed20deb2f98713d8e04722a 478 SUPERFAMILY SSF53187 24 212 2.13E-47 T 28-03-2018 AL504_RS16815 97b224a02ed20deb2f98713d8e04722a 478 SUPERFAMILY SSF53187 376 462 2.13E-47 T 28-03-2018 AL504_RS16815 97b224a02ed20deb2f98713d8e04722a 478 Pfam PF01546 Peptidase family M20/M25/M40 96 457 7.6E-21 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS16815 97b224a02ed20deb2f98713d8e04722a 478 Pfam PF07687 Peptidase dimerisation domain 210 360 3.1E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 151 4.8E-24 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 SUPERFAMILY SSF55257 176 229 1.08E-31 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 SUPERFAMILY SSF55257 5 51 1.08E-31 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 SMART SM00662 21 231 2.9E-99 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 SUPERFAMILY SSF56553 51 175 2.35E-42 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 SUPERFAMILY SSF47789 250 322 1.07E-26 T 28-03-2018 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 325 1.0E-34 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 224 7.3E-23 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 315 7.4E-106 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 316 35.569 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 307 9.8E-25 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 Gene3D G3DSA:1.10.150.20 245 327 8.5E-28 T 28-03-2018 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 Gene3D G3DSA:3.30.1360.10 2 87 8.7E-18 T 28-03-2018 AL504_RS20030 1ca21a7e104b7cf51eea8e7fdcf4a92f 328 Gene3D G3DSA:3.30.1360.10 109 228 7.6E-32 T 28-03-2018 AL504_RS02435 73e88bb047700410734374deeccca56e 1774 Pfam PF02395 Immunoglobulin A1 protease 62 776 4.4E-100 T 28-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AL504_RS02435 73e88bb047700410734374deeccca56e 1774 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1207 1774 6.5E-24 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS02435 73e88bb047700410734374deeccca56e 1774 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 72 92 8.0E-19 T 28-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AL504_RS02435 73e88bb047700410734374deeccca56e 1774 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 172 192 8.0E-19 T 28-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AL504_RS02435 73e88bb047700410734374deeccca56e 1774 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 290 308 8.0E-19 T 28-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AL504_RS02435 73e88bb047700410734374deeccca56e 1774 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 701 723 8.0E-19 T 28-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 AL504_RS02435 73e88bb047700410734374deeccca56e 1774 SMART SM00869 1512 1763 1.8E-9 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS02435 73e88bb047700410734374deeccca56e 1774 SUPERFAMILY SSF51126 448 577 2.23E-46 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS02435 73e88bb047700410734374deeccca56e 1774 SUPERFAMILY SSF51126 760 1117 2.23E-46 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS02435 73e88bb047700410734374deeccca56e 1774 SUPERFAMILY SSF51126 668 725 2.23E-46 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS02435 73e88bb047700410734374deeccca56e 1774 SUPERFAMILY SSF103515 1494 1774 1.15E-23 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS02435 73e88bb047700410734374deeccca56e 1774 Gene3D G3DSA:2.40.128.130 1469 1774 3.1E-22 T 28-03-2018 AL504_RS02710 8a68d4c78cf377e221a97dc0ae9b855d 219 SMART SM00947 30 201 1.6E-56 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS02710 8a68d4c78cf377e221a97dc0ae9b855d 219 Pfam PF00484 Carbonic anhydrase 37 196 1.7E-47 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS02710 8a68d4c78cf377e221a97dc0ae9b855d 219 SUPERFAMILY SSF53056 2 210 1.96E-61 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS02710 8a68d4c78cf377e221a97dc0ae9b855d 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 87 107 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS02710 8a68d4c78cf377e221a97dc0ae9b855d 219 Gene3D G3DSA:3.40.1050.10 1 212 1.8E-60 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS14265 213984a070520e41a51310681fb39dd8 266 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 10 266 1.4E-105 T 28-03-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 AL504_RS14265 213984a070520e41a51310681fb39dd8 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 265 1.9E-64 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS14265 213984a070520e41a51310681fb39dd8 266 Gene3D G3DSA:3.90.226.10 8 223 3.7E-64 T 28-03-2018 AL504_RS14265 213984a070520e41a51310681fb39dd8 266 Gene3D G3DSA:1.10.12.10 224 266 3.9E-15 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS14265 213984a070520e41a51310681fb39dd8 266 SUPERFAMILY SSF52096 6 266 3.69E-80 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 SUPERFAMILY SSF52490 15 207 2.88E-61 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 Gene3D G3DSA:3.30.1330.20 214 323 1.8E-43 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 SMART SM00864 15 204 3.1E-101 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 379 34.577 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 324 1.6E-115 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 PRINTS PR00423 Cell division protein FtsZ signature 97 117 9.3E-46 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 PRINTS PR00423 Cell division protein FtsZ signature 211 232 9.3E-46 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 PRINTS PR00423 Cell division protein FtsZ signature 125 146 9.3E-46 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 PRINTS PR00423 Cell division protein FtsZ signature 188 210 9.3E-46 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 SMART SM00865 206 324 1.3E-53 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 172 1.4E-34 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 Gene3D G3DSA:3.40.50.1440 11 213 2.0E-38 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 SUPERFAMILY SSF55307 206 322 5.26E-40 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AL504_RS14730 8badaae6f7e4520e07df767ffe4b4bf2 394 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.9E-32 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 Gene3D G3DSA:3.40.50.300 381 667 9.4E-49 T 28-03-2018 AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 266 8.0E-74 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 Gene3D G3DSA:3.40.50.300 277 379 1.1E-25 T 28-03-2018 AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 Gene3D G3DSA:3.40.50.300 140 276 1.4E-32 T 28-03-2018 AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 Gene3D G3DSA:3.40.50.300 1 139 3.2E-25 T 28-03-2018 AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 Pfam PF13361 UvrD-like helicase C-terminal domain 272 632 2.5E-70 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 SUPERFAMILY SSF52540 3 506 5.45E-176 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30705 64d42eba9f48e1d892e94e8421129531 763 SUPERFAMILY SSF52540 542 657 5.45E-176 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 3.6E-51 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 3.6E-51 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 PRINTS PR00474 Glutamate 5-kinase family signature 219 239 3.6E-51 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 3.6E-51 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 3.6E-51 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 376 5.5E-128 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 PIRSF PIRSF000729 10 378 1.2E-126 T 28-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 Pfam PF00696 Amino acid kinase family 16 244 8.2E-42 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 SUPERFAMILY SSF53633 15 264 2.09E-68 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 Gene3D G3DSA:2.30.130.10 286 377 8.8E-30 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 Gene3D G3DSA:3.40.1160.10 5 267 7.5E-62 T 28-03-2018 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 SMART SM00359 287 370 1.1E-16 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 276 36.081 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 Pfam PF01472 PUA domain 287 361 3.3E-23 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 SUPERFAMILY SSF88697 286 377 6.08E-25 T 28-03-2018 IPR015947 PUA-like domain AL504_RS21440 cb5f02dd2227ce0e8341cea323de3d94 378 ProSitePatterns PS00902 Glutamate 5-kinase signature. 217 234 - T 28-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL504_RS18735 177fb1d2d79fcdb0f34648cf1c3e0120 113 SUPERFAMILY SSF50249 7 102 1.11E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS18735 177fb1d2d79fcdb0f34648cf1c3e0120 113 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 36 93 1.4E-10 T 28-03-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AL504_RS18735 177fb1d2d79fcdb0f34648cf1c3e0120 113 Gene3D G3DSA:2.40.50.140 40 110 1.4E-7 T 28-03-2018 AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 TIGRFAM TIGR04029 CMD_Avi_7170: CMD domain protein, Avi_7170 family 13 168 5.5E-31 T 28-03-2018 IPR023982 Conserved hypothetical protein CHP04029, CMD-like AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 269 298 1.9E-9 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 Pfam PF02627 Carboxymuconolactone decarboxylase family 251 328 1.8E-13 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 SUPERFAMILY SSF69118 207 385 1.55E-42 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 Gene3D G3DSA:1.20.1290.10 12 180 2.1E-14 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 Gene3D G3DSA:1.20.1290.10 223 388 7.4E-27 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 213 385 5.5E-64 T 28-03-2018 IPR010195 Uncharacterised peroxidase-related AL504_RS00975 e31eaccef727ffb4d6300707f86e4532 389 SUPERFAMILY SSF69118 27 170 2.36E-21 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 1267 1295 0.017 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 488 2.0E-10 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Pfam PF00501 AMP-binding enzyme 24 406 1.5E-86 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Pfam PF00550 Phosphopantetheine attachment site 532 584 3.1E-6 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:2.160.10.10 1214 1323 2.4E-14 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 42 430 1.2E-113 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:3.30.300.30 400 489 1.4E-30 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:2.160.10.10 703 848 1.5E-11 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 SUPERFAMILY SSF47336 531 604 1.31E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 SUPERFAMILY SSF51161 717 836 1.37E-14 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 SUPERFAMILY SSF56801 15 504 6.8E-141 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:3.40.50.980 14 161 1.0E-35 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:3.40.50.980 162 308 6.2E-35 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 617 1317 2.9E-207 T 28-03-2018 IPR012728 Non-ribosomal peptide synthetase, C-terminal AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:2.30.38.10 313 396 1.6E-24 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 SUPERFAMILY SSF51161 1202 1321 3.88E-17 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 SUPERFAMILY SSF51161 969 1078 1.07E-17 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:1.10.1200.10 490 601 7.8E-12 T 28-03-2018 AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 ProSitePatterns PS00012 Phosphopantetheine attachment site. 542 557 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS10705 ba571f95fe937827ea137e268447af84 1323 Gene3D G3DSA:2.160.10.10 949 1075 3.3E-13 T 28-03-2018 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 SMART SM00304 213 265 4.1E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 Gene3D G3DSA:1.20.120.30 23 187 4.6E-20 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 6.3E-66 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 6.3E-66 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 6.3E-66 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 6.3E-66 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 6.3E-66 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 Pfam PF02203 Tar ligand binding domain homologue 1 166 4.8E-16 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 481 7.1E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 Pfam PF00672 HAMP domain 213 261 3.2E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 SUPERFAMILY SSF58104 233 516 1.31E-77 T 28-03-2018 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 SUPERFAMILY SSF47170 25 177 6.41E-16 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 Gene3D G3DSA:1.10.287.950 228 316 3.3E-14 T 28-03-2018 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 SMART SM00283 266 513 4.8E-98 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06400 f6497e149f7676c3b45f7f90f33f4f69 636 Gene3D G3DSA:1.10.287.950 317 517 5.7E-51 T 28-03-2018 AL504_RS04765 c417c087250cb5e6ff7311f42454a9f2 556 SUPERFAMILY SSF161098 20 271 9.68E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04765 c417c087250cb5e6ff7311f42454a9f2 556 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 382 545 1.5E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04765 c417c087250cb5e6ff7311f42454a9f2 556 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 277 1.4E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04765 c417c087250cb5e6ff7311f42454a9f2 556 SUPERFAMILY SSF161098 290 549 5.45E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04765 c417c087250cb5e6ff7311f42454a9f2 556 Gene3D G3DSA:1.10.3720.10 54 280 2.6E-28 T 28-03-2018 AL504_RS04765 c417c087250cb5e6ff7311f42454a9f2 556 Gene3D G3DSA:1.10.3720.10 332 554 1.7E-27 T 28-03-2018 AL504_RS26105 81243b977b50b61657d2c54405354889 262 SMART SM00382 30 224 4.9E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26105 81243b977b50b61657d2c54405354889 262 Pfam PF00005 ABC transporter 22 176 1.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26105 81243b977b50b61657d2c54405354889 262 Gene3D G3DSA:3.40.50.300 2 253 1.5E-51 T 28-03-2018 AL504_RS26105 81243b977b50b61657d2c54405354889 262 SUPERFAMILY SSF52540 4 247 6.41E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26105 81243b977b50b61657d2c54405354889 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 246 9.1E-8 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 PIRSF PIRSF000101 1 563 9.6E-285 T 28-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 Gene3D G3DSA:3.30.70.610 264 344 1.9E-19 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 Gene3D G3DSA:3.30.70.610 345 429 4.1E-23 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 Gene3D G3DSA:3.30.465.10 103 263 2.1E-75 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 Gene3D G3DSA:3.30.1370.20 430 513 4.9E-40 T 28-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 SUPERFAMILY SSF56176 6 265 2.01E-70 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 1.8E-136 T 28-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 SUPERFAMILY SSF55103 270 562 1.5E-109 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 Gene3D G3DSA:3.30.43.10 3 99 6.7E-12 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS00400 f2292fd3a3b7d768bd112cc8422b6127 563 Pfam PF01565 FAD binding domain 44 162 3.4E-10 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS17920 4c8e2fee9e17dc41ad79ba683e76f427 290 Gene3D G3DSA:1.10.10.10 1 81 9.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17920 4c8e2fee9e17dc41ad79ba683e76f427 290 Gene3D G3DSA:3.40.190.10 178 260 5.5E-16 T 28-03-2018 AL504_RS17920 4c8e2fee9e17dc41ad79ba683e76f427 290 SUPERFAMILY SSF46785 4 112 1.17E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17920 4c8e2fee9e17dc41ad79ba683e76f427 290 SUPERFAMILY SSF53850 90 288 1.01E-40 T 28-03-2018 AL504_RS17920 4c8e2fee9e17dc41ad79ba683e76f427 290 Pfam PF03466 LysR substrate binding domain 88 288 5.3E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS17920 4c8e2fee9e17dc41ad79ba683e76f427 290 Gene3D G3DSA:3.40.190.10 82 177 2.5E-20 T 28-03-2018 AL504_RS17920 4c8e2fee9e17dc41ad79ba683e76f427 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24105 6633b025ce06d644d5fb27c76bcb02a1 172 Pfam PF08281 Sigma-70, region 4 108 154 1.9E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24105 6633b025ce06d644d5fb27c76bcb02a1 172 Pfam PF04542 Sigma-70 region 2 11 76 5.0E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24105 6633b025ce06d644d5fb27c76bcb02a1 172 SUPERFAMILY SSF88946 10 91 6.28E-15 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24105 6633b025ce06d644d5fb27c76bcb02a1 172 SUPERFAMILY SSF88659 97 158 3.71E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24105 6633b025ce06d644d5fb27c76bcb02a1 172 Gene3D G3DSA:1.10.10.10 73 160 5.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24105 6633b025ce06d644d5fb27c76bcb02a1 172 Gene3D G3DSA:1.10.1740.10 6 72 1.9E-13 T 28-03-2018 AL504_RS24105 6633b025ce06d644d5fb27c76bcb02a1 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 156 3.3E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS20555 b103abd013ed1455cd77e56489c177ec 376 SUPERFAMILY SSF90002 280 374 1.44E-25 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS20555 b103abd013ed1455cd77e56489c177ec 376 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 192 1.5E-50 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL504_RS20555 b103abd013ed1455cd77e56489c177ec 376 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 280 374 6.6E-22 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS20555 b103abd013ed1455cd77e56489c177ec 376 SUPERFAMILY SSF52540 12 216 5.73E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20555 b103abd013ed1455cd77e56489c177ec 376 Gene3D G3DSA:3.40.50.300 8 212 7.2E-45 T 28-03-2018 AL504_RS20555 b103abd013ed1455cd77e56489c177ec 376 SMART SM00833 280 374 3.8E-18 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS20555 b103abd013ed1455cd77e56489c177ec 376 Gene3D G3DSA:3.30.1220.10 228 375 2.3E-25 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Gene3D G3DSA:3.30.930.10 490 692 5.3E-41 T 28-03-2018 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Gene3D G3DSA:3.30.70.380 700 804 2.1E-16 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SUPERFAMILY SSF56037 195 390 9.42E-67 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 804 1.2E-221 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Pfam PF03147 Ferredoxin-fold anticodon binding domain 703 804 1.7E-21 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Gene3D G3DSA:3.30.56.10 1 190 5.1E-52 T 28-03-2018 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Pfam PF03483 B3/4 domain 213 385 5.1E-60 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SMART SM00896 703 804 2.2E-24 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 798 43.145 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SUPERFAMILY SSF55681 465 691 1.04E-50 T 28-03-2018 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SMART SM00874 401 469 1.3E-27 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Gene3D G3DSA:3.50.40.10 196 394 2.3E-63 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Gene3D G3DSA:3.30.56.10 400 473 5.3E-23 T 28-03-2018 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Pfam PF01588 Putative tRNA binding domain 45 145 4.5E-26 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SMART SM00873 212 385 4.1E-79 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SUPERFAMILY SSF54991 698 804 3.4E-18 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SUPERFAMILY SSF46955 402 473 3.48E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS08345 e5b0f54853707f799079a1c701924328 805 Pfam PF03484 tRNA synthetase B5 domain 404 469 4.8E-19 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL504_RS08345 e5b0f54853707f799079a1c701924328 805 SUPERFAMILY SSF50249 39 197 4.9E-49 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS21415 091ff74b9dc3466f0d944c9f734aad8d 470 SUPERFAMILY SSF55103 222 470 7.03E-54 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS21415 091ff74b9dc3466f0d944c9f734aad8d 470 Gene3D G3DSA:3.30.465.10 98 218 4.1E-36 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS21415 091ff74b9dc3466f0d944c9f734aad8d 470 Pfam PF01565 FAD binding domain 42 179 3.3E-35 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS21415 091ff74b9dc3466f0d944c9f734aad8d 470 Gene3D G3DSA:3.30.43.10 1 97 1.5E-26 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS21415 091ff74b9dc3466f0d944c9f734aad8d 470 Gene3D G3DSA:1.10.45.10 430 469 2.0E-14 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL504_RS21415 091ff74b9dc3466f0d944c9f734aad8d 470 SUPERFAMILY SSF56176 5 217 2.07E-71 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS21415 091ff74b9dc3466f0d944c9f734aad8d 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 469 6.1E-50 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 12 408 2.2E-127 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 SUPERFAMILY SSF55031 215 331 6.11E-30 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 Pfam PF01546 Peptidase family M20/M25/M40 82 407 1.4E-38 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 SUPERFAMILY SSF53187 7 225 2.54E-91 T 28-03-2018 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 SUPERFAMILY SSF53187 338 410 2.54E-91 T 28-03-2018 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 Gene3D G3DSA:3.40.630.10 4 245 2.4E-40 T 28-03-2018 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 Gene3D G3DSA:3.40.630.10 246 413 2.2E-23 T 28-03-2018 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 PIRSF PIRSF001235 6 415 1.1E-132 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AL504_RS08460 b147c6a83618d9b7e2aed3efd744e47e 415 Pfam PF07687 Peptidase dimerisation domain 212 316 9.7E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 253 2.2E-22 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SMART SM00479 330 497 0.0049 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SUPERFAMILY SSF88723 1 166 3.08E-56 T 28-03-2018 IPR029060 PIN domain-like AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Gene3D G3DSA:1.10.150.20 181 257 5.3E-21 T 28-03-2018 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Pfam PF01612 3'-5' exonuclease 310 495 1.1E-36 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Gene3D G3DSA:1.20.1060.10 521 636 8.6E-36 T 28-03-2018 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SMART SM00482 664 869 2.4E-106 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Gene3D G3DSA:3.40.50.1010 3 180 7.7E-68 T 28-03-2018 IPR029060 PIN domain-like AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SMART SM00279 169 204 5.9E-12 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SUPERFAMILY SSF47807 167 283 4.04E-30 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SUPERFAMILY SSF56672 507 905 3.34E-150 T 28-03-2018 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Gene3D G3DSA:1.10.150.20 685 786 8.6E-42 T 28-03-2018 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SMART SM00475 2 259 4.4E-115 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Gene3D G3DSA:3.30.420.10 302 520 9.2E-44 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 TIGRFAM TIGR00593 pola: DNA polymerase I 5 905 4.5E-271 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 ProSitePatterns PS00447 DNA polymerase family A signature. 731 750 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 166 2.9E-54 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 707 720 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 756 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 700 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 768 779 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 801 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 633 655 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 838 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 852 865 8.6E-67 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Gene3D G3DSA:3.30.70.370 787 905 8.5E-25 T 28-03-2018 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 Pfam PF00476 DNA polymerase family A 529 902 9.1E-152 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SUPERFAMILY SSF53098 309 495 2.23E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS11020 0fed79498bdc3384ba6baa0fec23de68 905 SMART SM00474 310 496 5.1E-25 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL504_RS06455 2a5e55070a3fbc56e0b3014ffe5de0da 135 Pfam PF00460 Flagella basal body rod protein 19 39 1.9E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL504_RS06455 2a5e55070a3fbc56e0b3014ffe5de0da 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 134 4.8E-39 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL504_RS06455 2a5e55070a3fbc56e0b3014ffe5de0da 135 PIRSF PIRSF002889 1 135 7.9E-44 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL504_RS16145 a73ecbf5021da579da4be46c37cdef0a 425 Gene3D G3DSA:2.40.50.100 195 383 2.8E-4 T 28-03-2018 AL504_RS16145 a73ecbf5021da579da4be46c37cdef0a 425 Gene3D G3DSA:2.40.50.100 93 165 2.1E-16 T 28-03-2018 AL504_RS16145 a73ecbf5021da579da4be46c37cdef0a 425 SUPERFAMILY SSF111369 84 321 4.58E-58 T 28-03-2018 AL504_RS16145 a73ecbf5021da579da4be46c37cdef0a 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 397 9.8E-75 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS16145 a73ecbf5021da579da4be46c37cdef0a 425 Pfam PF13437 HlyD family secretion protein 205 308 1.9E-6 T 28-03-2018 AL504_RS16145 a73ecbf5021da579da4be46c37cdef0a 425 Pfam PF13533 Biotin-lipoyl like 94 139 6.3E-14 T 28-03-2018 AL504_RS05880 9d67c4628938badcd7032dddfebd4674 188 PIRSF PIRSF036382 1 167 1.3E-26 T 28-03-2018 IPR008327 Signal transduction response regulator, antiterminator AL504_RS05880 9d67c4628938badcd7032dddfebd4674 188 Pfam PF03861 ANTAR domain 108 160 1.9E-12 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL504_RS05880 9d67c4628938badcd7032dddfebd4674 188 SUPERFAMILY SSF52172 1 160 6.44E-30 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS05880 9d67c4628938badcd7032dddfebd4674 188 SMART SM01012 105 160 7.0E-12 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL504_RS05880 9d67c4628938badcd7032dddfebd4674 188 Gene3D G3DSA:1.10.10.10 120 162 8.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05880 9d67c4628938badcd7032dddfebd4674 188 Gene3D G3DSA:3.40.50.2300 38 119 3.0E-4 T 28-03-2018 AL504_RS18640 7cb44275c3563a9f8d7729ab035df2ef 399 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 10 393 5.2E-112 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL504_RS18640 7cb44275c3563a9f8d7729ab035df2ef 399 Gene3D G3DSA:3.40.640.10 6 263 5.3E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS18640 7cb44275c3563a9f8d7729ab035df2ef 399 Gene3D G3DSA:3.90.1150.10 265 399 1.3E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS18640 7cb44275c3563a9f8d7729ab035df2ef 399 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 392 6.4E-92 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS18640 7cb44275c3563a9f8d7729ab035df2ef 399 PIRSF PIRSF001434 1 395 5.2E-115 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS18640 7cb44275c3563a9f8d7729ab035df2ef 399 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 205 219 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS18640 7cb44275c3563a9f8d7729ab035df2ef 399 SUPERFAMILY SSF53383 45 393 3.34E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 1.7E-38 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 387 1.0E-38 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 PIRSF PIRSF016578 13 99 0.0052 T 28-03-2018 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 PIRSF PIRSF016578 142 392 1.8E-11 T 28-03-2018 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 Gene3D G3DSA:2.40.110.10 126 222 6.5E-42 T 28-03-2018 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 Gene3D G3DSA:1.10.540.10 1 125 1.1E-42 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 Gene3D G3DSA:1.20.140.10 223 392 7.4E-52 T 28-03-2018 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 SUPERFAMILY SSF47203 233 388 1.61E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 1.1E-27 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 SUPERFAMILY SSF56645 6 247 2.49E-88 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS18685 a65875e62a801923a91974516ad8c9eb 392 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS04430 df05d0573303cb13c1ad3a441dc2130e 411 SUPERFAMILY SSF51905 3 57 3.17E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS04430 df05d0573303cb13c1ad3a441dc2130e 411 SUPERFAMILY SSF51905 108 267 3.17E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS04430 df05d0573303cb13c1ad3a441dc2130e 411 SUPERFAMILY SSF51905 355 411 3.17E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS04430 df05d0573303cb13c1ad3a441dc2130e 411 Pfam PF01266 FAD dependent oxidoreductase 4 392 2.1E-59 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS04430 df05d0573303cb13c1ad3a441dc2130e 411 Gene3D G3DSA:3.50.50.60 1 411 2.1E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS04430 df05d0573303cb13c1ad3a441dc2130e 411 SUPERFAMILY SSF54373 270 355 2.31E-6 T 28-03-2018 AL504_RS07035 e15fae32d25662be4a8f0dda6acdb031 297 SUPERFAMILY SSF47240 73 210 1.25E-11 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS07035 e15fae32d25662be4a8f0dda6acdb031 297 Gene3D G3DSA:1.10.620.20 4 264 3.2E-13 T 28-03-2018 AL504_RS07035 e15fae32d25662be4a8f0dda6acdb031 297 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 8 287 8.4E-31 T 28-03-2018 IPR025859 P-aminobenzoate N-oxygenase AurF AL504_RS08760 852655265f5aed7a3661ed4a08df2f61 244 Gene3D G3DSA:1.10.260.40 4 71 3.4E-21 T 28-03-2018 AL504_RS08760 852655265f5aed7a3661ed4a08df2f61 244 Pfam PF01381 Helix-turn-helix 12 65 3.2E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS08760 852655265f5aed7a3661ed4a08df2f61 244 Gene3D G3DSA:1.10.1220.10 86 159 0.0011 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS08760 852655265f5aed7a3661ed4a08df2f61 244 SMART SM00530 10 65 1.9E-17 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS08760 852655265f5aed7a3661ed4a08df2f61 244 SUPERFAMILY SSF47413 5 70 4.56E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS16860 7431c1db69f2abe5d2538dc609e392d2 326 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 8 324 4.3E-144 T 28-03-2018 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 AL504_RS16860 7431c1db69f2abe5d2538dc609e392d2 326 Gene3D G3DSA:2.160.10.10 159 321 3.7E-18 T 28-03-2018 AL504_RS16860 7431c1db69f2abe5d2538dc609e392d2 326 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 240 272 2.2E-15 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS16860 7431c1db69f2abe5d2538dc609e392d2 326 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 118 158 7.7E-16 T 28-03-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 AL504_RS16860 7431c1db69f2abe5d2538dc609e392d2 326 SUPERFAMILY SSF51161 79 305 4.71E-38 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS16860 7431c1db69f2abe5d2538dc609e392d2 326 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 6 323 42.232 T 28-03-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 AL504_RS16860 7431c1db69f2abe5d2538dc609e392d2 326 Gene3D G3DSA:3.30.60.70 118 158 2.5E-16 T 28-03-2018 AL504_RS17465 e3cee5ae5e8a4aff577fa41fbbfd470a 208 SUPERFAMILY SSF49354 5 112 4.19E-19 T 28-03-2018 IPR008962 PapD-like AL504_RS17465 e3cee5ae5e8a4aff577fa41fbbfd470a 208 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 5 112 1.5E-15 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AL504_RS17465 e3cee5ae5e8a4aff577fa41fbbfd470a 208 Gene3D G3DSA:2.60.40.10 2 112 5.0E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS24400 4d9c51ce763a653d45a8a55a34feb1b5 337 Gene3D G3DSA:3.40.190.10 142 245 1.5E-8 T 28-03-2018 AL504_RS24400 4d9c51ce763a653d45a8a55a34feb1b5 337 PIRSF PIRSF017082 5 335 4.8E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS24400 4d9c51ce763a653d45a8a55a34feb1b5 337 SUPERFAMILY SSF53850 122 294 7.96E-6 T 28-03-2018 AL504_RS24400 4d9c51ce763a653d45a8a55a34feb1b5 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 332 7.5E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04760 f98326e0035a9b54dbdb427048b30082 347 Pfam PF13343 Bacterial extracellular solute-binding protein 79 305 2.1E-18 T 28-03-2018 AL504_RS04760 f98326e0035a9b54dbdb427048b30082 347 PIRSF PIRSF002825 3 347 2.7E-86 T 28-03-2018 IPR026045 Ferric binding protein AL504_RS04760 f98326e0035a9b54dbdb427048b30082 347 SUPERFAMILY SSF53850 30 344 5.93E-74 T 28-03-2018 AL504_RS04760 f98326e0035a9b54dbdb427048b30082 347 Gene3D G3DSA:3.40.190.10 29 168 3.7E-20 T 28-03-2018 AL504_RS04760 f98326e0035a9b54dbdb427048b30082 347 Gene3D G3DSA:3.40.190.10 169 313 9.8E-19 T 28-03-2018 AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 SMART SM00829 10 316 4.7E-43 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 Gene3D G3DSA:3.90.180.10 1 138 6.7E-47 T 28-03-2018 AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 Gene3D G3DSA:3.40.50.720 139 300 3.0E-33 T 28-03-2018 AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 SUPERFAMILY SSF51735 116 285 1.19E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 SUPERFAMILY SSF50129 1 148 6.54E-43 T 28-03-2018 IPR011032 GroES-like AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 Pfam PF13602 Zinc-binding dehydrogenase 186 315 1.4E-25 T 28-03-2018 AL504_RS01195 178ec676a469f50f9217ebefb40eab61 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 99 4.7E-13 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS14735 d8fb57088023d947e14013487a399393 408 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 406 30.671 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL504_RS14735 d8fb57088023d947e14013487a399393 408 Pfam PF14450 Cell division protein FtsA 206 373 3.5E-25 T 28-03-2018 AL504_RS14735 d8fb57088023d947e14013487a399393 408 Pfam PF14450 Cell division protein FtsA 10 193 5.6E-10 T 28-03-2018 AL504_RS14735 d8fb57088023d947e14013487a399393 408 Gene3D G3DSA:3.30.420.40 3 185 1.8E-40 T 28-03-2018 AL504_RS14735 d8fb57088023d947e14013487a399393 408 SUPERFAMILY SSF53067 7 196 3.63E-63 T 28-03-2018 AL504_RS14735 d8fb57088023d947e14013487a399393 408 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 376 1.6E-147 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL504_RS14735 d8fb57088023d947e14013487a399393 408 SMART SM00842 9 195 5.8E-107 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AL504_RS14735 d8fb57088023d947e14013487a399393 408 SUPERFAMILY SSF53067 198 375 2.32E-47 T 28-03-2018 AL504_RS14735 d8fb57088023d947e14013487a399393 408 Gene3D G3DSA:3.30.420.40 260 351 3.8E-19 T 28-03-2018 AL504_RS14735 d8fb57088023d947e14013487a399393 408 Gene3D G3DSA:3.30.420.40 196 259 1.9E-8 T 28-03-2018 AL504_RS14735 d8fb57088023d947e14013487a399393 408 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 1.9E-32 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AL504_RS14735 d8fb57088023d947e14013487a399393 408 PIRSF PIRSF003101 1 408 3.5E-151 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL504_RS16170 6260c36f44643b5aabf9f7d9bf971d90 141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 45 57 2.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16170 6260c36f44643b5aabf9f7d9bf971d90 141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 15 29 2.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16170 6260c36f44643b5aabf9f7d9bf971d90 141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 29 45 2.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16170 6260c36f44643b5aabf9f7d9bf971d90 141 SMART SM00421 12 69 1.8E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16170 6260c36f44643b5aabf9f7d9bf971d90 141 SUPERFAMILY SSF46894 5 75 8.16E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS16170 6260c36f44643b5aabf9f7d9bf971d90 141 Pfam PF00196 Bacterial regulatory proteins, luxR family 14 67 2.6E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS16170 6260c36f44643b5aabf9f7d9bf971d90 141 Gene3D G3DSA:1.10.10.10 3 78 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07415 4fd89f25299837dfd8571ab1b65c0472 106 SUPERFAMILY SSF47413 37 92 1.23E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS07415 4fd89f25299837dfd8571ab1b65c0472 106 Gene3D G3DSA:1.10.260.40 15 94 3.1E-4 T 28-03-2018 AL504_RS08180 85fe61b3769fdddc5a2ad0c80be41656 265 Pfam PF00005 ABC transporter 38 176 4.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS08180 85fe61b3769fdddc5a2ad0c80be41656 265 Gene3D G3DSA:3.40.50.300 16 236 2.3E-56 T 28-03-2018 AL504_RS08180 85fe61b3769fdddc5a2ad0c80be41656 265 SMART SM00382 47 227 6.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS08180 85fe61b3769fdddc5a2ad0c80be41656 265 SUPERFAMILY SSF52540 19 244 6.62E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS08180 85fe61b3769fdddc5a2ad0c80be41656 265 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 SUPERFAMILY SSF52540 23 248 9.86E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 SUPERFAMILY SSF50331 242 357 2.92E-18 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 Gene3D G3DSA:2.40.50.140 296 348 8.8E-12 T 28-03-2018 AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 Gene3D G3DSA:2.40.50.100 245 295 1.4E-7 T 28-03-2018 AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 Pfam PF08402 TOBE domain 283 348 5.4E-9 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 Pfam PF00005 ABC transporter 27 167 2.7E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 Gene3D G3DSA:3.40.50.300 1 240 4.3E-54 T 28-03-2018 AL504_RS05460 da839099932faeb1b86363d3c4f680df 362 SMART SM00382 33 217 3.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 Pfam PF12801 4Fe-4S binding domain 588 630 9.3E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 Pfam PF12801 4Fe-4S binding domain 486 532 7.9E-14 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 Pfam PF04205 FMN-binding domain 66 145 4.3E-5 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 SMART SM00900 63 152 2.1E-8 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 PIRSF PIRSF036354 1 718 1.7E-297 T 28-03-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 Gene3D G3DSA:3.30.70.20 646 710 2.5E-5 T 28-03-2018 AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 Gene3D G3DSA:3.30.70.20 607 645 0.004 T 28-03-2018 AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 SUPERFAMILY SSF54862 603 671 1.2E-9 T 28-03-2018 AL504_RS28045 989560834ef92823d1e1167385c4a5f6 721 SUPERFAMILY SSF54862 505 548 1.2E-9 T 28-03-2018 AL504_RS11940 c6d1a7153a26a3f6763cde114d721bc6 232 SMART SM00882 5 217 2.5E-94 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS11940 c6d1a7153a26a3f6763cde114d721bc6 232 SUPERFAMILY SSF100950 2 226 1.36E-89 T 28-03-2018 AL504_RS11940 c6d1a7153a26a3f6763cde114d721bc6 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS11940 c6d1a7153a26a3f6763cde114d721bc6 232 Pfam PF01144 Coenzyme A transferase 6 217 1.9E-80 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS11940 c6d1a7153a26a3f6763cde114d721bc6 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 3.2E-80 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AL504_RS11940 c6d1a7153a26a3f6763cde114d721bc6 232 Gene3D G3DSA:3.40.1080.10 1 232 1.7E-99 T 28-03-2018 AL504_RS11240 e2326caa8cc66e611875480b04760fa6 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.485 T 28-03-2018 IPR022894 Oligoribonuclease GO:0000175 AL504_RS11240 e2326caa8cc66e611875480b04760fa6 181 Pfam PF00929 Exonuclease 9 170 2.1E-33 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL504_RS11240 e2326caa8cc66e611875480b04760fa6 181 SMART SM00479 7 180 1.2E-27 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL504_RS11240 e2326caa8cc66e611875480b04760fa6 181 Gene3D G3DSA:3.30.420.10 2 181 3.5E-30 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS11240 e2326caa8cc66e611875480b04760fa6 181 SUPERFAMILY SSF53098 2 180 2.58E-49 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS17925 3aa35c6efb8840c3d2f2261e3f1979e2 406 Gene3D G3DSA:1.20.1250.20 213 385 5.5E-12 T 28-03-2018 AL504_RS17925 3aa35c6efb8840c3d2f2261e3f1979e2 406 SUPERFAMILY SSF103473 8 383 4.58E-27 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17925 3aa35c6efb8840c3d2f2261e3f1979e2 406 Gene3D G3DSA:1.20.1250.20 18 204 1.6E-9 T 28-03-2018 AL504_RS17925 3aa35c6efb8840c3d2f2261e3f1979e2 406 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 27 381 5.7E-80 T 28-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 SUPERFAMILY SSF54368 4 98 7.19E-34 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 469 2.6E-198 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 SMART SM01230 103 380 7.9E-149 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 Gene3D G3DSA:3.10.20.70 3 105 9.9E-27 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 387 399 - T 28-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 260 275 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 SUPERFAMILY SSF55931 103 469 1.08E-139 T 28-03-2018 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 Pfam PF00120 Glutamine synthetase, catalytic domain 104 467 2.4E-139 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 Gene3D G3DSA:3.30.590.10 106 458 1.3E-121 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 96 8.6E-30 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS04815 c924b4a4fc399da3b5307c88e229dcff 470 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 Pfam PF00117 Glutamine amidotransferase class-I 4 185 1.2E-54 T 28-03-2018 IPR017926 Glutamine amidotransferase AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 1.6E-77 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 SUPERFAMILY SSF52317 2 187 8.83E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.4E-6 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.4E-6 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.1E-13 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.1E-13 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.1E-13 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 Gene3D G3DSA:3.40.50.880 1 188 2.1E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.2E-33 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00097 Anthranilate synthase component II signature 164 177 4.2E-33 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.2E-33 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.2E-33 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.2E-33 T 28-03-2018 AL504_RS17130 22a9f4fb5180708db9ca5aad565ab8e7 188 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.2E-33 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF56801 503 1018 9.94E-130 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 3873 4139 7.45E-48 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SMART SM00824 Thioesterase 4767 5015 0.0022 T 28-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:1.10.1200.10 1010 1100 1.3E-20 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:2.30.38.10 1898 1978 1.5E-22 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF56801 1533 2101 1.3E-160 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00975 Thioesterase domain 4765 4886 4.1E-23 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 2798 3043 2.33E-42 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SMART SM00823 Phosphopantetheine attachment site 2089 2157 7.1E-4 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SMART SM00823 Phosphopantetheine attachment site 3590 3658 7.5E-4 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SMART SM00823 Phosphopantetheine attachment site 1005 1073 0.0019 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:1.10.1200.10 3596 3671 6.6E-23 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 648 801 1.1E-32 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 1727 1892 8.0E-38 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 4315 4475 2.5E-31 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:1.10.1200.10 2093 2159 1.9E-23 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:1.10.1200.10 4680 4746 4.8E-15 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3614 3629 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.300.30 4563 4679 9.2E-37 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.300.30 3481 3595 4.7E-41 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.300.30 896 1009 1.2E-34 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.300.30 1980 2092 1.5E-41 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF56801 3081 3602 1.96E-162 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1721 1732 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 531 925 2.6E-112 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1598 2009 9.1E-132 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3103 3510 7.8E-139 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4189 4592 2.8E-125 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 50 228 4.78E-42 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4309 4320 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF47336 2081 2151 1.15E-18 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 1296 1538 1.56E-55 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 2164 2339 5.56E-38 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF47336 4669 4740 1.7E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.1820 4747 5018 2.3E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF13193 AMP-binding enzyme C-terminal domain 3494 3565 3.2E-14 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF13193 AMP-binding enzyme C-terminal domain 909 980 3.1E-7 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF13193 AMP-binding enzyme C-terminal domain 4576 4651 2.8E-10 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF13193 AMP-binding enzyme C-terminal domain 1993 2064 1.3E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2113 2128 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF53474 4741 5010 8.84E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 3225 3384 2.8E-44 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:2.30.38.10 3396 3476 2.8E-25 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:2.30.38.10 4477 4558 2.3E-21 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 3691 3887 2.0E-37 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 1117 1289 2.56E-49 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 2350 2585 6.89E-39 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 2616 2789 1.26E-40 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 ProSitePatterns PS00455 Putative AMP-binding domain signature. 642 653 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00668 Condensation domain 1114 1553 1.2E-99 T 28-03-2018 IPR001242 Condensation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00668 Condensation domain 2167 2586 1.7E-68 T 28-03-2018 IPR001242 Condensation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00668 Condensation domain 3694 4143 3.4E-68 T 28-03-2018 IPR001242 Condensation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00668 Condensation domain 46 482 4.7E-92 T 28-03-2018 IPR001242 Condensation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00668 Condensation domain 2618 3059 1.5E-70 T 28-03-2018 IPR001242 Condensation domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4700 4715 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00501 AMP-binding enzyme 1577 1985 2.2E-97 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00501 AMP-binding enzyme 509 901 7.4E-81 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00501 AMP-binding enzyme 3084 3486 8.5E-103 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00501 AMP-binding enzyme 4170 4568 1.1E-87 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3224 3235 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 1567 1726 2.3E-45 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 4160 4314 6.3E-46 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 499 647 3.0E-33 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.40.50.980 3077 3224 2.2E-45 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:2.30.38.10 802 893 1.2E-22 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF47336 3582 3652 1.7E-18 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF56801 4123 4689 3.4E-148 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.559.10 2602 2816 2.4E-40 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.559.10 28 252 1.9E-39 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.559.10 2160 2364 7.4E-32 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.559.10 3681 3885 7.4E-35 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Gene3D G3DSA:3.30.559.10 1101 1289 7.7E-41 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2469 2607 3.9E-31 T 28-03-2018 IPR010060 Non-ribosomal peptide synthase AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF52777 234 484 6.56E-56 T 28-03-2018 AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 SUPERFAMILY SSF47336 999 1069 3.4E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00550 Phosphopantetheine attachment site 3592 3652 2.8E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00550 Phosphopantetheine attachment site 4677 4741 5.3E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00550 Phosphopantetheine attachment site 1007 1069 7.3E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03230 9e2088840272b0d5d508ce3bd187ff36 5030 Pfam PF00550 Phosphopantetheine attachment site 2091 2151 2.4E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS07355 8f640827668355014fe63272e8d05176 252 Pfam PF12833 Helix-turn-helix domain 172 247 1.5E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07355 8f640827668355014fe63272e8d05176 252 Gene3D G3DSA:1.10.10.60 206 250 2.5E-8 T 28-03-2018 AL504_RS07355 8f640827668355014fe63272e8d05176 252 Gene3D G3DSA:1.10.10.60 146 205 1.0E-10 T 28-03-2018 AL504_RS07355 8f640827668355014fe63272e8d05176 252 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 201 242 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS07355 8f640827668355014fe63272e8d05176 252 Pfam PF02311 AraC-like ligand binding domain 13 138 6.8E-6 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS07355 8f640827668355014fe63272e8d05176 252 SMART SM00342 164 246 7.2E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07355 8f640827668355014fe63272e8d05176 252 SUPERFAMILY SSF51182 7 170 3.85E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS07355 8f640827668355014fe63272e8d05176 252 Gene3D G3DSA:2.60.120.10 5 98 8.0E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS07355 8f640827668355014fe63272e8d05176 252 SUPERFAMILY SSF46689 201 248 1.08E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 Gene3D G3DSA:3.30.565.10 296 455 2.1E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 290 3.6E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 448 3.2E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 SMART SM00388 226 291 6.1E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 SMART SM00387 336 450 1.2E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 SUPERFAMILY SSF55874 280 450 1.83E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 Gene3D G3DSA:1.10.287.130 216 287 5.8E-14 T 28-03-2018 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 Pfam PF08521 Two-component sensor kinase N-terminal 5 149 5.6E-35 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 SUPERFAMILY SSF47384 209 290 2.75E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 Gene3D G3DSA:1.20.5.1040 1 44 0.067 T 28-03-2018 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 Gene3D G3DSA:1.20.5.1040 125 173 3.2E-7 T 28-03-2018 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 5.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 5.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10735 028f33f54ab24590b1437bb913b6a13b 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 5.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 PRINTS PR00084 Mannitol dehydrogenase signature 256 271 4.0E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 PRINTS PR00084 Mannitol dehydrogenase signature 31 41 4.0E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 PRINTS PR00084 Mannitol dehydrogenase signature 226 239 4.0E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 PRINTS PR00084 Mannitol dehydrogenase signature 187 200 4.0E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 SUPERFAMILY SSF48179 293 504 8.84E-49 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 SUPERFAMILY SSF51735 6 289 1.69E-97 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 Gene3D G3DSA:3.40.50.720 3 289 9.5E-113 T 28-03-2018 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 30 196 1.4E-37 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 Gene3D G3DSA:1.10.1040.10 291 509 2.2E-59 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS23465 66b7b8c2f5f261d778c8a689f0a92b65 552 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 225 449 1.6E-69 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL504_RS28745 fb62538beb76702131772f535bb627d1 732 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 715 732 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS28745 fb62538beb76702131772f535bb627d1 732 SUPERFAMILY SSF56935 65 732 4.27E-107 T 28-03-2018 AL504_RS28745 fb62538beb76702131772f535bb627d1 732 Pfam PF00593 TonB dependent receptor 277 730 1.2E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS28745 fb62538beb76702131772f535bb627d1 732 Gene3D G3DSA:2.40.170.20 189 732 7.6E-64 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS28745 fb62538beb76702131772f535bb627d1 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 171 2.0E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS28745 fb62538beb76702131772f535bb627d1 732 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 76 732 6.5E-113 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS28745 fb62538beb76702131772f535bb627d1 732 Gene3D G3DSA:2.170.130.10 21 188 5.1E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS10175 6199b1f0902748b14c42486787017846 821 Pfam PF00773 RNB domain 269 608 8.9E-101 T 28-03-2018 AL504_RS10175 6199b1f0902748b14c42486787017846 821 Gene3D G3DSA:1.10.10.10 6 89 2.8E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10175 6199b1f0902748b14c42486787017846 821 Hamap MF_01895 Ribonuclease R [rnr]. 48 751 54.142 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL504_RS10175 6199b1f0902748b14c42486787017846 821 ProSitePatterns PS01175 Ribonuclease II family signature. 576 600 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site AL504_RS10175 6199b1f0902748b14c42486787017846 821 TIGRFAM TIGR02063 RNase_R: ribonuclease R 29 751 2.8E-245 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL504_RS10175 6199b1f0902748b14c42486787017846 821 SUPERFAMILY SSF50249 147 246 1.5E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS10175 6199b1f0902748b14c42486787017846 821 SMART SM00357 96 154 2.3E-12 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL504_RS10175 6199b1f0902748b14c42486787017846 821 SUPERFAMILY SSF50249 670 750 1.14E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS10175 6199b1f0902748b14c42486787017846 821 SMART SM00955 269 609 2.0E-178 T 28-03-2018 AL504_RS10175 6199b1f0902748b14c42486787017846 821 SUPERFAMILY SSF50249 77 156 2.2E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS10175 6199b1f0902748b14c42486787017846 821 Pfam PF00575 S1 RNA binding domain 668 748 2.3E-10 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS10175 6199b1f0902748b14c42486787017846 821 Pfam PF08206 Ribonuclease B OB domain 97 153 2.0E-19 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL504_RS10175 6199b1f0902748b14c42486787017846 821 SMART SM00316 668 751 9.2E-13 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS10175 6199b1f0902748b14c42486787017846 821 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 90 751 3.0E-205 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL504_RS10175 6199b1f0902748b14c42486787017846 821 Gene3D G3DSA:2.40.50.140 667 752 1.1E-19 T 28-03-2018 AL504_RS10175 6199b1f0902748b14c42486787017846 821 SUPERFAMILY SSF50249 229 667 6.85E-133 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 500 2.2E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 486 2.2E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 543 2.2E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 2.2E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SMART SM00388 319 384 5.5E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SUPERFAMILY SSF47384 306 385 3.53E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 269 2.1E-18 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 544 5.8E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SUPERFAMILY SSF53850 42 272 4.18E-28 T 28-03-2018 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Gene3D G3DSA:3.30.565.10 379 546 1.9E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Pfam PF00072 Response regulator receiver domain 572 687 3.2E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SMART SM00448 570 686 3.2E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Pfam PF01627 Hpt domain 713 783 1.6E-6 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Gene3D G3DSA:3.40.190.10 33 141 3.4E-12 T 28-03-2018 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SUPERFAMILY SSF52172 568 690 3.84E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Gene3D G3DSA:3.40.190.10 142 230 6.5E-7 T 28-03-2018 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Gene3D G3DSA:1.20.120.160 704 805 3.0E-7 T 28-03-2018 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Gene3D G3DSA:1.10.287.130 309 378 2.6E-15 T 28-03-2018 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SMART SM00062 49 271 1.3E-16 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SUPERFAMILY SSF55874 373 546 4.06E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SMART SM00387 430 546 6.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Gene3D G3DSA:3.40.50.2300 557 693 2.1E-35 T 28-03-2018 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 SUPERFAMILY SSF47226 669 782 9.03E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS28985 08b13af28675e7f05c8ed5a50e800199 805 Pfam PF00512 His Kinase A (phospho-acceptor) domain 320 384 1.4E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS15050 08d9da3b80ddc60ca80b2f6359638d91 154 PRINTS PR01438 Universal stress protein signature 108 120 4.6E-18 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS15050 08d9da3b80ddc60ca80b2f6359638d91 154 PRINTS PR01438 Universal stress protein signature 2 20 4.6E-18 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS15050 08d9da3b80ddc60ca80b2f6359638d91 154 PRINTS PR01438 Universal stress protein signature 126 148 4.6E-18 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS15050 08d9da3b80ddc60ca80b2f6359638d91 154 SUPERFAMILY SSF52402 2 148 2.09E-35 T 28-03-2018 AL504_RS15050 08d9da3b80ddc60ca80b2f6359638d91 154 Pfam PF00582 Universal stress protein family 1 148 1.5E-30 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS15050 08d9da3b80ddc60ca80b2f6359638d91 154 Gene3D G3DSA:3.40.50.620 1 154 5.9E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS19830 7e212043feeb554a8e6a27f4b47cde39 472 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 10 472 3.4E-211 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AL504_RS19830 7e212043feeb554a8e6a27f4b47cde39 472 Gene3D G3DSA:3.90.550.10 9 340 2.4E-90 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS19830 7e212043feeb554a8e6a27f4b47cde39 472 Pfam PF01050 Mannose-6-phosphate isomerase 318 468 4.0E-70 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AL504_RS19830 7e212043feeb554a8e6a27f4b47cde39 472 Pfam PF00483 Nucleotidyl transferase 10 289 2.4E-67 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL504_RS19830 7e212043feeb554a8e6a27f4b47cde39 472 Gene3D G3DSA:2.60.120.10 341 451 2.2E-31 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS19830 7e212043feeb554a8e6a27f4b47cde39 472 SUPERFAMILY SSF51182 188 472 1.98E-90 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS19830 7e212043feeb554a8e6a27f4b47cde39 472 SUPERFAMILY SSF53448 9 284 3.6E-70 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00369 Flavodoxin signature 948 967 9.6E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00369 Flavodoxin signature 844 857 9.6E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00369 Flavodoxin signature 892 903 9.6E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00369 Flavodoxin signature 924 934 9.6E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:3.40.228.10 168 257 3.4E-27 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Pfam PF00258 Flavodoxin 846 970 1.7E-25 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Pfam PF01568 Molydopterin dinucleotide binding domain 602 712 8.3E-35 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Pfam PF00667 FAD binding domain 1037 1232 5.9E-30 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:3.40.50.740 62 167 9.3E-16 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 54 7.8E-20 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 SUPERFAMILY SSF53706 6 522 1.7E-178 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 10 28 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:3.40.50.80 1249 1405 2.0E-38 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:3.40.50.360 832 991 2.0E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 SUPERFAMILY SSF63380 1036 1253 2.1E-59 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:2.20.25.90 6 59 5.1E-21 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 SMART SM00926 5 60 1.9E-20 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 SUPERFAMILY SSF50692 574 717 6.56E-47 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:2.40.30.10 1031 1245 1.3E-44 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Pfam PF00384 Molybdopterin oxidoreductase 89 487 1.9E-69 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:2.40.40.20 553 717 4.7E-46 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 SUPERFAMILY SSF52218 841 984 8.8E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 SUPERFAMILY SSF52343 1251 1406 1.27E-51 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Gene3D G3DSA:3.40.50.740 258 548 4.1E-71 T 28-03-2018 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 Pfam PF00175 Oxidoreductase NAD-binding domain 1264 1370 6.0E-18 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1332 1348 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1194 1201 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1301 1312 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1355 1363 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1263 1282 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1288 1297 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1075 1085 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS24515 031c2e47efd6db3d35fb35320ed95bbb 1406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1227 1236 2.8E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS14935 5c1ec060e4df1fe34bb9feab4d770746 210 SUPERFAMILY SSF52218 1 198 2.48E-54 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS14935 5c1ec060e4df1fe34bb9feab4d770746 210 Pfam PF02525 Flavodoxin-like fold 1 196 9.8E-46 T 28-03-2018 IPR003680 Flavodoxin-like fold AL504_RS14935 5c1ec060e4df1fe34bb9feab4d770746 210 Gene3D G3DSA:3.40.50.360 1 199 2.9E-42 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS14935 5c1ec060e4df1fe34bb9feab4d770746 210 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 30.166 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AL504_RS10640 a988dd3cb02b8a8b615013f359fc4637 403 Pfam PF13458 Periplasmic binding protein 30 366 2.8E-86 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS10640 a988dd3cb02b8a8b615013f359fc4637 403 SUPERFAMILY SSF53822 30 401 4.71E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS10640 a988dd3cb02b8a8b615013f359fc4637 403 Gene3D G3DSA:3.40.50.2300 28 162 2.7E-15 T 28-03-2018 AL504_RS10640 a988dd3cb02b8a8b615013f359fc4637 403 Gene3D G3DSA:3.40.50.2300 163 347 5.3E-30 T 28-03-2018 AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 Gene3D G3DSA:3.40.50.720 172 289 2.7E-17 T 28-03-2018 AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 SMART SM00829 8 350 0.0014 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 Pfam PF00107 Zinc-binding dehydrogenase 187 314 1.6E-21 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 SUPERFAMILY SSF50129 1 172 3.35E-39 T 28-03-2018 IPR011032 GroES-like AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 Gene3D G3DSA:3.90.180.10 1 171 1.3E-37 T 28-03-2018 AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 Gene3D G3DSA:3.90.180.10 290 353 0.0053 T 28-03-2018 AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 SUPERFAMILY SSF51735 147 319 9.32E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 140 2.0E-30 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS04525 53684c14c62e071dd8968eced2262c14 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL504_RS16985 1d0cbdedfab7297b8d4b1e4c33b3ce14 322 SUPERFAMILY SSF53850 109 283 7.45E-13 T 28-03-2018 AL504_RS16985 1d0cbdedfab7297b8d4b1e4c33b3ce14 322 PIRSF PIRSF017082 3 321 1.8E-93 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16985 1d0cbdedfab7297b8d4b1e4c33b3ce14 322 Gene3D G3DSA:3.40.190.10 121 249 2.1E-12 T 28-03-2018 AL504_RS16985 1d0cbdedfab7297b8d4b1e4c33b3ce14 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 317 3.3E-91 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14885 d755c1a388a85805597994690b245626 561 SUPERFAMILY SSF143975 3 378 4.18E-132 T 28-03-2018 AL504_RS14885 d755c1a388a85805597994690b245626 561 SUPERFAMILY SSF52016 380 558 1.33E-57 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS14885 d755c1a388a85805597994690b245626 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 4.0E-227 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS14885 d755c1a388a85805597994690b245626 561 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS14885 d755c1a388a85805597994690b245626 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS14885 d755c1a388a85805597994690b245626 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 44.034 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS14885 d755c1a388a85805597994690b245626 561 Pfam PF00920 Dehydratase family 36 554 7.0E-203 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 Pfam PF00561 alpha/beta hydrolase fold 38 252 1.6E-20 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 Gene3D G3DSA:3.40.50.1820 3 266 1.3E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 3.6E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 3.6E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 3.6E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 3.6E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 16 263 1.1E-78 T 28-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AL504_RS17065 04dc6d8888466ae18305b4610cb071a4 266 SUPERFAMILY SSF53474 6 263 8.41E-60 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 193 6.0E-5 T 28-03-2018 AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.1E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.1E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 1.1E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 SUPERFAMILY SSF51735 9 247 3.2E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 Pfam PF00106 short chain dehydrogenase 12 197 1.9E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01255 a45b330de37aca39ba585ccf852d8c7c 287 Gene3D G3DSA:3.40.50.720 6 286 2.0E-64 T 28-03-2018 AL504_RS00220 784ba7afe82f89125b2836ae4e62be87 168 SUPERFAMILY SSF88946 6 97 3.34E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00220 784ba7afe82f89125b2836ae4e62be87 168 Pfam PF08281 Sigma-70, region 4 109 160 6.7E-11 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00220 784ba7afe82f89125b2836ae4e62be87 168 Gene3D G3DSA:1.10.1740.10 4 75 4.1E-16 T 28-03-2018 AL504_RS00220 784ba7afe82f89125b2836ae4e62be87 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 161 9.5E-19 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00220 784ba7afe82f89125b2836ae4e62be87 168 SUPERFAMILY SSF88659 102 162 1.33E-11 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00220 784ba7afe82f89125b2836ae4e62be87 168 Pfam PF04542 Sigma-70 region 2 12 76 6.6E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00220 784ba7afe82f89125b2836ae4e62be87 168 Gene3D G3DSA:1.10.10.10 76 163 3.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04065 9c8ca92d2f31641f3cc4c85acbd1a1ed 194 Gene3D G3DSA:1.10.1740.10 16 101 5.9E-11 T 28-03-2018 AL504_RS04065 9c8ca92d2f31641f3cc4c85acbd1a1ed 194 SUPERFAMILY SSF88946 29 116 1.69E-8 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04065 9c8ca92d2f31641f3cc4c85acbd1a1ed 194 Pfam PF08281 Sigma-70, region 4 135 184 1.0E-6 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04065 9c8ca92d2f31641f3cc4c85acbd1a1ed 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 186 1.4E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04065 9c8ca92d2f31641f3cc4c85acbd1a1ed 194 Gene3D G3DSA:1.10.10.10 111 193 1.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04065 9c8ca92d2f31641f3cc4c85acbd1a1ed 194 Pfam PF04542 Sigma-70 region 2 36 103 1.5E-6 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04065 9c8ca92d2f31641f3cc4c85acbd1a1ed 194 SUPERFAMILY SSF88659 111 188 8.04E-10 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 Gene3D G3DSA:3.40.50.720 42 254 2.2E-61 T 28-03-2018 AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 Gene3D G3DSA:3.40.50.720 1 41 2.7E-12 T 28-03-2018 AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 SUPERFAMILY SSF51735 1 251 2.19E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 190 0.002 T 28-03-2018 AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 1.6E-66 T 28-03-2018 AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12800 aa2d714d1343af19337ee190aca453a3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS02755 078cc77654679e9b5ab00dc8d30c2a06 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 219 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL504_RS02755 078cc77654679e9b5ab00dc8d30c2a06 379 Gene3D G3DSA:3.90.1150.10 254 379 2.8E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS02755 078cc77654679e9b5ab00dc8d30c2a06 379 Gene3D G3DSA:3.40.640.10 7 243 1.4E-38 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS02755 078cc77654679e9b5ab00dc8d30c2a06 379 Pfam PF00266 Aminotransferase class-V 25 343 4.7E-47 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS02755 078cc77654679e9b5ab00dc8d30c2a06 379 SUPERFAMILY SSF53383 3 373 4.65E-77 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 SMART SM00862 147 223 9.5E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 Gene3D G3DSA:1.10.10.10 121 230 1.8E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 Gene3D G3DSA:3.40.50.2300 1 120 8.0E-35 T 28-03-2018 AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 SUPERFAMILY SSF52172 2 130 1.71E-38 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 Pfam PF00072 Response regulator receiver domain 5 113 2.8E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 1.1E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 SMART SM00448 2 112 1.8E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04645 99bea7a6fd892b301c1eb63fd056c2a5 233 SUPERFAMILY SSF46894 124 224 8.22E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS07685 c629c0be9293ad0604fae73c1fa92a1a 124 ProSitePatterns PS00195 Glutaredoxin active site. 45 61 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL504_RS07685 c629c0be9293ad0604fae73c1fa92a1a 124 Pfam PF13417 Glutathione S-transferase, N-terminal domain 45 122 6.6E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS07685 c629c0be9293ad0604fae73c1fa92a1a 124 Gene3D G3DSA:3.40.30.10 25 124 2.3E-16 T 28-03-2018 AL504_RS07685 c629c0be9293ad0604fae73c1fa92a1a 124 SUPERFAMILY SSF52833 44 122 2.59E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS02455 191de721b75a2232509e1f9b13e4007f 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 266 1.0E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02455 191de721b75a2232509e1f9b13e4007f 275 SUPERFAMILY SSF161098 75 261 2.49E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02455 191de721b75a2232509e1f9b13e4007f 275 Gene3D G3DSA:1.10.3720.10 28 271 3.4E-31 T 28-03-2018 AL504_RS31300 9430ed089233401742859de3273a97c4 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 170 5.1E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS31300 9430ed089233401742859de3273a97c4 706 Pfam PF00593 TonB dependent receptor 267 705 4.4E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS31300 9430ed089233401742859de3273a97c4 706 Gene3D G3DSA:2.40.170.20 184 706 9.8E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS31300 9430ed089233401742859de3273a97c4 706 SUPERFAMILY SSF56935 27 706 1.02E-134 T 28-03-2018 AL504_RS31300 9430ed089233401742859de3273a97c4 706 Gene3D G3DSA:2.170.130.10 30 178 8.0E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS31300 9430ed089233401742859de3273a97c4 706 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 706 2.7E-109 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 Gene3D G3DSA:1.10.10.10 1 84 4.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 Gene3D G3DSA:3.40.190.10 90 180 3.9E-22 T 28-03-2018 AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 SUPERFAMILY SSF46785 1 112 8.26E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 Pfam PF03466 LysR substrate binding domain 88 293 9.2E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 Gene3D G3DSA:3.40.190.10 181 268 4.4E-14 T 28-03-2018 AL504_RS10715 5dcbbcbf034087f68bc48693b0581c71 305 SUPERFAMILY SSF53850 87 294 7.12E-36 T 28-03-2018 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 Pfam PF03934 Type II secretion system (T2SS), protein K 23 294 2.6E-54 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 SUPERFAMILY SSF47781 187 235 1.11E-5 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 SUPERFAMILY SSF54523 34 97 8.63E-7 T 28-03-2018 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 SUPERFAMILY SSF54523 262 301 8.63E-7 T 28-03-2018 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 Gene3D G3DSA:1.10.40.60 148 189 2.0E-5 T 28-03-2018 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 SUPERFAMILY SSF158544 98 186 2.38E-8 T 28-03-2018 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 Gene3D G3DSA:1.10.40.60 190 249 2.0E-7 T 28-03-2018 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 Gene3D G3DSA:3.30.1300.30 19 147 3.1E-18 T 28-03-2018 AL504_RS04130 0d68d75d1e6755cb40ce2896f02b6ff9 302 PIRSF PIRSF002786 1 302 2.6E-56 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 SUPERFAMILY SSF46785 13 95 1.47E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 SMART SM00866 105 242 2.3E-28 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 SMART SM00345 24 83 1.6E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 83 2.9E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 SUPERFAMILY SSF64288 71 247 1.88E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 Pfam PF07702 UTRA domain 106 240 1.9E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 Gene3D G3DSA:3.40.1410.10 83 248 1.1E-33 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS28305 6e14ed8b83c7c399e0a067f6bd342de1 301 Gene3D G3DSA:1.10.10.10 7 82 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00625 c657ad783b505a3652d775e9b415fa4c 4889 SMART SM00912 40 153 9.4E-41 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS00625 c657ad783b505a3652d775e9b415fa4c 4889 Gene3D G3DSA:2.160.20.20 4139 4602 2.8E-4 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS00625 c657ad783b505a3652d775e9b415fa4c 4889 SUPERFAMILY SSF51126 44 347 2.07E-45 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS00625 c657ad783b505a3652d775e9b415fa4c 4889 Gene3D G3DSA:2.160.20.10 37 349 4.7E-52 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS00625 c657ad783b505a3652d775e9b415fa4c 4889 Gene3D G3DSA:2.160.20.10 4007 4135 0.28 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS00625 c657ad783b505a3652d775e9b415fa4c 4889 Pfam PF05860 haemagglutination activity domain 42 153 6.9E-23 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS00625 c657ad783b505a3652d775e9b415fa4c 4889 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 75 149 5.6E-22 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 372 390 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 22 47 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 420 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 430 447 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 214 230 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 244 263 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 97 115 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 350 368 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 115 134 2.9E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 SUPERFAMILY SSF56235 1 526 6.17E-132 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS23140 246a2f566edff8febfe25d64b78efce3 527 Pfam PF01019 Gamma-glutamyltranspeptidase 15 522 2.3E-120 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 Gene3D G3DSA:1.10.10.60 160 215 6.3E-12 T 28-03-2018 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 Pfam PF12833 Helix-turn-helix domain 184 261 9.2E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 SUPERFAMILY SSF51215 16 145 1.1E-17 T 28-03-2018 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 SUPERFAMILY SSF46689 214 261 1.75E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 SMART SM00342 178 260 2.2E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 Pfam PF02311 AraC-like ligand binding domain 24 141 2.2E-20 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 Gene3D G3DSA:2.60.120.10 7 92 2.1E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 Gene3D G3DSA:1.10.10.60 216 264 1.5E-13 T 28-03-2018 AL504_RS24955 c2c9ad8710f3ff91bed992b1c293f387 265 SUPERFAMILY SSF46689 163 212 1.55E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS11995 d4a1bca2934ee91f18901053edb1b0a1 446 Gene3D G3DSA:1.20.1250.20 30 241 9.5E-17 T 28-03-2018 AL504_RS11995 d4a1bca2934ee91f18901053edb1b0a1 446 SUPERFAMILY SSF103473 36 433 2.75E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS11995 d4a1bca2934ee91f18901053edb1b0a1 446 Gene3D G3DSA:1.20.1250.20 243 436 9.5E-25 T 28-03-2018 AL504_RS11995 d4a1bca2934ee91f18901053edb1b0a1 446 Pfam PF11700 Vacuole effluxer Atg22 like 166 441 1.7E-33 T 28-03-2018 IPR024671 Autophagy-related protein 22-like AL504_RS11995 d4a1bca2934ee91f18901053edb1b0a1 446 Pfam PF11700 Vacuole effluxer Atg22 like 79 161 5.1E-6 T 28-03-2018 IPR024671 Autophagy-related protein 22-like AL504_RS21055 f823905b355155126a2356fae2e9255d 248 Pfam PF04972 BON domain 131 194 2.4E-11 T 28-03-2018 IPR007055 BON domain AL504_RS21055 f823905b355155126a2356fae2e9255d 248 Pfam PF04972 BON domain 64 122 3.1E-13 T 28-03-2018 IPR007055 BON domain AL504_RS21055 f823905b355155126a2356fae2e9255d 248 SMART SM00749 60 121 21.0 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL504_RS21055 f823905b355155126a2356fae2e9255d 248 SMART SM00749 136 199 1.2 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 Gene3D G3DSA:3.40.50.2300 1 146 2.3E-21 T 28-03-2018 AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 SMART SM00052 153 399 1.4E-57 T 28-03-2018 IPR001633 EAL domain AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 SUPERFAMILY SSF141868 167 406 2.35E-62 T 28-03-2018 IPR001633 EAL domain AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 Pfam PF00072 Response regulator receiver domain 12 133 9.5E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 Pfam PF00563 EAL domain 160 394 9.6E-56 T 28-03-2018 IPR001633 EAL domain AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 SUPERFAMILY SSF52172 9 138 3.84E-21 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 SMART SM00448 10 133 1.1E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS04420 8cbe8fccc9512c199d424091e47dee16 407 Gene3D G3DSA:3.20.20.450 147 402 5.2E-68 T 28-03-2018 IPR001633 EAL domain AL504_RS15490 af25590f091aebbaf5dde121bb893756 218 SUPERFAMILY SSF53448 46 176 2.87E-5 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS15490 af25590f091aebbaf5dde121bb893756 218 Pfam PF03407 Nucleotide-diphospho-sugar transferase 63 156 4.4E-7 T 28-03-2018 IPR005069 Nucleotide-diphospho-sugar transferase AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 433 1.8E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 SUPERFAMILY SSF47384 207 289 7.26E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 SUPERFAMILY SSF55874 278 442 9.56E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 SMART SM00388 224 289 9.3E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 Gene3D G3DSA:3.30.565.10 284 443 5.9E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 288 6.4E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 SMART SM00387 334 444 1.4E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 399 1.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 1.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 Gene3D G3DSA:1.10.287.130 214 283 2.5E-11 T 28-03-2018 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 Gene3D G3DSA:1.20.5.1040 120 171 2.1E-8 T 28-03-2018 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 Gene3D G3DSA:1.20.5.1040 7 56 4.3E-8 T 28-03-2018 AL504_RS11130 6b7220f01dac36c605d41836dead3dfb 447 Pfam PF08521 Two-component sensor kinase N-terminal 22 145 1.4E-9 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal AL504_RS11155 13515d91fed26f2a6a4a465b2e522a88 225 Gene3D G3DSA:3.40.140.10 100 225 7.9E-42 T 28-03-2018 AL504_RS11155 13515d91fed26f2a6a4a465b2e522a88 225 Gene3D G3DSA:1.10.150.20 31 93 0.0012 T 28-03-2018 AL504_RS11155 13515d91fed26f2a6a4a465b2e522a88 225 SUPERFAMILY SSF47781 16 89 1.71E-10 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS11155 13515d91fed26f2a6a4a465b2e522a88 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 225 4.1E-66 T 28-03-2018 IPR001405 RadC protein AL504_RS11155 13515d91fed26f2a6a4a465b2e522a88 225 SUPERFAMILY SSF102712 150 200 6.93E-6 T 28-03-2018 AL504_RS11155 13515d91fed26f2a6a4a465b2e522a88 225 Pfam PF04002 RadC-like JAB domain 105 223 4.0E-41 T 28-03-2018 IPR025657 RadC-like JAB domain AL504_RS11155 13515d91fed26f2a6a4a465b2e522a88 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL504_RS24575 23413c977992183594e5cfb2bc89a0f4 334 Pfam PF08279 HTH domain 7 61 5.8E-12 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AL504_RS24575 23413c977992183594e5cfb2bc89a0f4 334 PIRSF PIRSF016838 1 321 2.2E-19 T 28-03-2018 IPR028349 Protein PafC AL504_RS24575 23413c977992183594e5cfb2bc89a0f4 334 SUPERFAMILY SSF46785 4 60 3.0E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24575 23413c977992183594e5cfb2bc89a0f4 334 Pfam PF13280 WYL domain 142 313 1.4E-33 T 28-03-2018 IPR026881 WYL domain AL504_RS24575 23413c977992183594e5cfb2bc89a0f4 334 Gene3D G3DSA:1.10.10.10 1 65 1.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16160 6f8d508d288ad484c75916de0490009d 284 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 124 2.1E-24 T 28-03-2018 IPR010627 Peptidase A24A, N-terminal AL504_RS16160 6f8d508d288ad484c75916de0490009d 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 211 222 1.9E-23 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL504_RS16160 6f8d508d288ad484c75916de0490009d 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.9E-23 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL504_RS16160 6f8d508d288ad484c75916de0490009d 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 223 238 1.9E-23 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL504_RS16160 6f8d508d288ad484c75916de0490009d 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 200 210 1.9E-23 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL504_RS16160 6f8d508d288ad484c75916de0490009d 284 Pfam PF01478 Type IV leader peptidase family 136 242 1.8E-21 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Pfam PF16921 Tex protein YqgF-like domain 344 470 2.4E-52 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 SMART SM00732 344 443 1.0E-38 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 SUPERFAMILY SSF47781 489 577 7.67E-27 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Pfam PF09371 Tex-like protein N-terminal domain 23 206 1.9E-67 T 28-03-2018 IPR018974 Tex-like protein, N-terminal AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 SMART SM00316 668 739 1.3E-24 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 SUPERFAMILY SSF47781 579 651 6.67E-19 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Gene3D G3DSA:1.10.150.310 518 649 4.9E-42 T 28-03-2018 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 SUPERFAMILY SSF158832 17 339 4.71E-111 T 28-03-2018 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 SUPERFAMILY SSF50249 657 743 2.76E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Gene3D G3DSA:1.10.10.650 16 116 1.8E-32 T 28-03-2018 IPR023319 Tex-like protein, HTH domain AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Pfam PF12836 Helix-hairpin-helix motif 510 574 2.6E-25 T 28-03-2018 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Pfam PF00575 S1 RNA binding domain 670 739 6.7E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Gene3D G3DSA:1.10.3500.10 372 517 2.4E-37 T 28-03-2018 IPR023323 Tex-like domain AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Gene3D G3DSA:1.10.3500.10 117 371 5.5E-76 T 28-03-2018 IPR023323 Tex-like domain AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 Gene3D G3DSA:2.40.50.140 650 745 1.9E-25 T 28-03-2018 AL504_RS11625 ec2c18963ad25c21c4a806444e2a21a1 793 SUPERFAMILY SSF53098 340 488 6.45E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 SMART SM00448 20 133 1.1E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 SUPERFAMILY SSF52172 15 141 2.7E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 SMART SM00342 186 269 2.0E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 Gene3D G3DSA:3.40.50.2300 4 140 1.0E-34 T 28-03-2018 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 Pfam PF00072 Response regulator receiver domain 22 132 6.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 Pfam PF12833 Helix-turn-helix domain 192 270 8.4E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 Gene3D G3DSA:1.10.10.60 227 275 2.9E-13 T 28-03-2018 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 Gene3D G3DSA:1.10.10.60 171 226 2.2E-7 T 28-03-2018 AL504_RS00635 ac656c8039ff559b44dc0c9eba0f5da0 276 SUPERFAMILY SSF46689 223 271 3.85E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS10530 9e629d024374a2d883e7f26e9881f6e9 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 466 9.1E-69 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS10530 9e629d024374a2d883e7f26e9881f6e9 469 Pfam PF01565 FAD binding domain 52 188 3.7E-40 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS10530 9e629d024374a2d883e7f26e9881f6e9 469 Gene3D G3DSA:3.30.465.10 105 248 5.2E-47 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS10530 9e629d024374a2d883e7f26e9881f6e9 469 Gene3D G3DSA:1.10.45.10 427 466 3.5E-19 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL504_RS10530 9e629d024374a2d883e7f26e9881f6e9 469 SUPERFAMILY SSF56176 13 226 2.24E-71 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS10530 9e629d024374a2d883e7f26e9881f6e9 469 Gene3D G3DSA:3.30.43.10 2 104 9.7E-26 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS10530 9e629d024374a2d883e7f26e9881f6e9 469 SUPERFAMILY SSF55103 229 469 1.39E-73 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Gene3D G3DSA:3.40.120.10 263 364 2.0E-23 T 28-03-2018 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 SUPERFAMILY SSF53738 7 179 1.18E-36 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Gene3D G3DSA:3.40.120.10 155 262 4.3E-34 T 28-03-2018 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Gene3D G3DSA:3.40.120.10 2 152 1.3E-32 T 28-03-2018 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 SUPERFAMILY SSF53738 156 257 3.3E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Gene3D G3DSA:3.30.310.50 365 461 2.2E-12 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 SUPERFAMILY SSF53738 259 355 2.04E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 2.0E-26 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 137 3.2E-32 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 356 1.7E-20 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.1E-23 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 1.1E-23 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 219 1.1E-23 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 1.1E-23 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 451 9.7E-11 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS23150 428667811dbe6d202fc24363c5f25244 463 SUPERFAMILY SSF55957 368 463 1.12E-19 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS16830 f8056bd8e7c535ea9a899bc88cf8d945 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 318 3.7E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16830 f8056bd8e7c535ea9a899bc88cf8d945 325 Gene3D G3DSA:1.10.3720.10 4 308 7.6E-41 T 28-03-2018 AL504_RS16830 f8056bd8e7c535ea9a899bc88cf8d945 325 SUPERFAMILY SSF161098 90 304 1.46E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01795 d36dc7cefd028628cde8ee4c2d9c5f6e 406 Pfam PF05977 Transmembrane secretion effector 7 398 1.1E-28 T 28-03-2018 IPR010290 Transmembrane secretion effector AL504_RS01795 d36dc7cefd028628cde8ee4c2d9c5f6e 406 Gene3D G3DSA:1.20.1250.20 6 202 3.9E-20 T 28-03-2018 AL504_RS01795 d36dc7cefd028628cde8ee4c2d9c5f6e 406 Gene3D G3DSA:1.20.1250.20 210 405 1.0E-11 T 28-03-2018 AL504_RS01795 d36dc7cefd028628cde8ee4c2d9c5f6e 406 SUPERFAMILY SSF103473 9 398 4.19E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS23055 b23d42cba7504752024e94a824a27574 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS23055 b23d42cba7504752024e94a824a27574 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 482 8.6E-214 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AL504_RS23055 b23d42cba7504752024e94a824a27574 498 Gene3D G3DSA:3.40.309.10 264 461 4.2E-64 T 28-03-2018 AL504_RS23055 b23d42cba7504752024e94a824a27574 498 Pfam PF00171 Aldehyde dehydrogenase family 19 478 4.1E-141 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS23055 b23d42cba7504752024e94a824a27574 498 SUPERFAMILY SSF53720 3 483 2.49E-152 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS23055 b23d42cba7504752024e94a824a27574 498 Gene3D G3DSA:3.40.605.10 1 263 1.3E-86 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS03560 0ad69fd228edec35293d3a9f7d019e50 288 Pfam PF00005 ABC transporter 29 186 1.1E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03560 0ad69fd228edec35293d3a9f7d019e50 288 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 279 1.3E-9 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS03560 0ad69fd228edec35293d3a9f7d019e50 288 Gene3D G3DSA:3.40.50.300 5 287 1.9E-71 T 28-03-2018 AL504_RS03560 0ad69fd228edec35293d3a9f7d019e50 288 SMART SM00382 37 236 5.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03560 0ad69fd228edec35293d3a9f7d019e50 288 SUPERFAMILY SSF52540 8 258 8.52E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26685 90f57193ba1f983c4c3b018f5c18f642 203 SMART SM00479 36 202 2.9E-31 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL504_RS26685 90f57193ba1f983c4c3b018f5c18f642 203 Pfam PF00929 Exonuclease 38 192 4.1E-21 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL504_RS26685 90f57193ba1f983c4c3b018f5c18f642 203 SUPERFAMILY SSF53098 36 200 3.18E-42 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS26685 90f57193ba1f983c4c3b018f5c18f642 203 Gene3D G3DSA:3.30.420.10 18 201 4.6E-34 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 SMART SM00904 192 317 2.8E-52 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 Pfam PF01687 Riboflavin kinase 193 316 1.7E-33 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 Gene3D G3DSA:3.40.50.620 6 188 3.6E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 PIRSF PIRSF004491 5 320 1.4E-94 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 SUPERFAMILY SSF82114 184 317 5.45E-38 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 Gene3D G3DSA:2.40.30.30 189 321 1.7E-35 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 316 5.4E-87 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 SUPERFAMILY SSF52374 20 184 3.97E-31 T 28-03-2018 AL504_RS30680 4e7e906077f5ed193399b8b01bd25a0b 321 Pfam PF06574 FAD synthetase 16 175 5.1E-49 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL504_RS28435 5eb09554765d194ae64d7864c6bf400d 300 SUPERFAMILY SSF53448 31 233 2.81E-49 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS28435 5eb09554765d194ae64d7864c6bf400d 300 Pfam PF00535 Glycosyl transferase family 2 34 166 2.7E-25 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS28435 5eb09554765d194ae64d7864c6bf400d 300 Gene3D G3DSA:3.90.550.10 3 257 2.0E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Gene3D G3DSA:3.30.450.40 216 406 4.3E-19 T 28-03-2018 IPR029016 GAF domain-like AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SMART SM00448 1012 1131 1.2E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SMART SM00448 866 980 8.8E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SMART SM00448 744 854 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Gene3D G3DSA:1.10.287.130 457 530 1.6E-16 T 28-03-2018 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Pfam PF00512 His Kinase A (phospho-acceptor) domain 467 534 5.5E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Pfam PF13185 GAF domain 240 374 2.5E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SUPERFAMILY SSF55874 523 691 6.29E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SUPERFAMILY SSF52172 1010 1136 2.7E-38 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SMART SM00388 466 534 2.0E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Pfam PF00072 Response regulator receiver domain 868 978 1.9E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Pfam PF00072 Response regulator receiver domain 1014 1131 1.4E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Pfam PF00072 Response regulator receiver domain 746 854 1.1E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Pfam PF05227 CHASE3 domain 48 180 7.2E-29 T 28-03-2018 IPR007891 CHASE3 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SUPERFAMILY SSF47384 454 535 6.08E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SUPERFAMILY SSF55781 214 374 5.1E-14 T 28-03-2018 IPR029016 GAF domain-like AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SUPERFAMILY SSF52172 866 988 1.99E-22 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Gene3D G3DSA:3.30.565.10 538 700 6.8E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SUPERFAMILY SSF52172 743 859 1.08E-25 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 632 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 646 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Gene3D G3DSA:3.40.50.2300 1007 1137 3.0E-40 T 28-03-2018 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 SMART SM00387 581 693 3.7E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Gene3D G3DSA:3.40.50.2300 735 861 8.3E-24 T 28-03-2018 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Gene3D G3DSA:3.40.50.2300 862 1005 1.5E-24 T 28-03-2018 AL504_RS23830 99143f87800d19be5a6d1f16a716db17 1137 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 691 3.5E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS14190 9320aedf80b2e2285a6eb27e21ad3677 772 SUPERFAMILY SSF56935 15 421 6.23E-67 T 28-03-2018 AL504_RS14190 9320aedf80b2e2285a6eb27e21ad3677 772 SUPERFAMILY SSF56935 452 770 6.23E-67 T 28-03-2018 AL504_RS14190 9320aedf80b2e2285a6eb27e21ad3677 772 Gene3D G3DSA:2.40.170.20 153 772 6.1E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS14190 9320aedf80b2e2285a6eb27e21ad3677 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 18 128 2.5E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS14190 9320aedf80b2e2285a6eb27e21ad3677 772 Pfam PF00593 TonB dependent receptor 325 769 2.7E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS14190 9320aedf80b2e2285a6eb27e21ad3677 772 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 755 772 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS14190 9320aedf80b2e2285a6eb27e21ad3677 772 Gene3D G3DSA:2.170.130.10 10 152 9.1E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS28940 8cad24595792947b4bed5c9b2a20c499 720 SUPERFAMILY SSF56935 23 720 2.11E-102 T 28-03-2018 AL504_RS28940 8cad24595792947b4bed5c9b2a20c499 720 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 703 720 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS28940 8cad24595792947b4bed5c9b2a20c499 720 Gene3D G3DSA:2.40.170.20 184 720 1.1E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS28940 8cad24595792947b4bed5c9b2a20c499 720 Pfam PF00593 TonB dependent receptor 237 718 7.3E-51 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS28940 8cad24595792947b4bed5c9b2a20c499 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 165 1.2E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS28940 8cad24595792947b4bed5c9b2a20c499 720 Gene3D G3DSA:2.170.130.10 24 173 8.0E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS02090 3c889d51edc57e6495ee6d1eade5032c 167 Pfam PF13302 Acetyltransferase (GNAT) domain 10 144 1.1E-31 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS02090 3c889d51edc57e6495ee6d1eade5032c 167 SUPERFAMILY SSF55729 4 153 7.7E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS02090 3c889d51edc57e6495ee6d1eade5032c 167 Gene3D G3DSA:3.40.630.30 1 166 4.0E-28 T 28-03-2018 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 Gene3D G3DSA:3.30.160.20 152 243 2.3E-16 T 28-03-2018 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 Gene3D G3DSA:1.10.1520.10 1 148 2.9E-44 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 Pfam PF00035 Double-stranded RNA binding motif 153 218 4.3E-9 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain AL504_RS12105 22a0d051fef497d646634b371e573a62 253 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 219 5.4E-70 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 SUPERFAMILY SSF54768 106 225 9.27E-23 T 28-03-2018 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 SMART SM00358 153 221 1.5E-13 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain AL504_RS12105 22a0d051fef497d646634b371e573a62 253 SMART SM00535 18 146 1.5E-52 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.272 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 SUPERFAMILY SSF69065 2 152 6.28E-48 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL504_RS12105 22a0d051fef497d646634b371e573a62 253 Pfam PF14622 Ribonuclease-III-like 16 137 5.5E-38 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 291 1.1E-130 T 28-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 Gene3D G3DSA:3.40.50.720 2 172 8.3E-36 T 28-03-2018 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 PIRSF PIRSF000103 1 296 2.9E-80 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 Gene3D G3DSA:1.10.1040.10 173 296 1.0E-31 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 SUPERFAMILY SSF48179 162 292 4.42E-40 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 290 1.4E-35 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 SUPERFAMILY SSF51735 3 162 8.26E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS06035 d67a90e9dfba4b9595c4b6df39a8efea 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 3.2E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 Gene3D G3DSA:3.30.2090.10 706 792 4.4E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 Gene3D G3DSA:3.30.2090.10 181 269 1.1E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 Gene3D G3DSA:1.20.1640.10 281 499 3.1E-48 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 Gene3D G3DSA:1.20.1640.10 805 1026 9.2E-34 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82693 136 182 5.58E-21 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82693 268 324 5.58E-21 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82693 40 134 3.14E-23 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82714 183 266 1.57E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82866 815 1015 1.44E-40 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82693 558 654 1.2E-15 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82714 707 789 1.31E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82693 792 837 2.88E-9 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82693 669 705 2.88E-9 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 Gene3D G3DSA:3.30.70.1430 40 142 3.1E-26 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 1.1E-82 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 Gene3D G3DSA:3.30.70.1430 560 656 3.7E-15 T 28-03-2018 AL504_RS16135 0aa1f93b56cf0c0a45b2f5605811900a 1036 SUPERFAMILY SSF82866 290 490 7.59E-48 T 28-03-2018 AL504_RS16265 6a509f52dea4ecdb799f5786f73f79fd 246 PIRSF PIRSF039085 2 246 6.3E-108 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS16265 6a509f52dea4ecdb799f5786f73f79fd 246 SUPERFAMILY SSF52540 5 240 8.24E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16265 6a509f52dea4ecdb799f5786f73f79fd 246 Pfam PF00005 ABC transporter 21 169 1.9E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16265 6a509f52dea4ecdb799f5786f73f79fd 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS16265 6a509f52dea4ecdb799f5786f73f79fd 246 SMART SM00382 30 218 6.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16265 6a509f52dea4ecdb799f5786f73f79fd 246 Gene3D G3DSA:3.40.50.300 1 245 5.8E-77 T 28-03-2018 AL504_RS03395 6a509f52dea4ecdb799f5786f73f79fd 246 PIRSF PIRSF039085 2 246 6.3E-108 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS03395 6a509f52dea4ecdb799f5786f73f79fd 246 SUPERFAMILY SSF52540 5 240 8.24E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03395 6a509f52dea4ecdb799f5786f73f79fd 246 Pfam PF00005 ABC transporter 21 169 1.9E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03395 6a509f52dea4ecdb799f5786f73f79fd 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03395 6a509f52dea4ecdb799f5786f73f79fd 246 SMART SM00382 30 218 6.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03395 6a509f52dea4ecdb799f5786f73f79fd 246 Gene3D G3DSA:3.40.50.300 1 245 5.8E-77 T 28-03-2018 AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 142 148 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 Gene3D G3DSA:1.10.10.10 87 174 1.2E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 Gene3D G3DSA:3.30.160.70 18 86 7.6E-20 T 28-03-2018 AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 92 171 7.2E-30 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 SUPERFAMILY SSF53155 19 96 1.79E-18 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 93 172 5.4E-29 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 22 172 37.511 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AL504_RS21075 3f664c8da4ec741b63b0a4ae72934faf 204 SUPERFAMILY SSF46767 91 172 7.06E-28 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS10110 9a0668fd4f4bd8643fd3b92e458e96c7 499 SUPERFAMILY SSF56954 6 470 4.05E-107 T 28-03-2018 AL504_RS10110 9a0668fd4f4bd8643fd3b92e458e96c7 499 Gene3D G3DSA:1.20.1600.10 24 474 1.0E-103 T 28-03-2018 AL504_RS10110 9a0668fd4f4bd8643fd3b92e458e96c7 499 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 468 3.8E-130 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS10110 9a0668fd4f4bd8643fd3b92e458e96c7 499 Pfam PF02321 Outer membrane efflux protein 76 255 2.4E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS10110 9a0668fd4f4bd8643fd3b92e458e96c7 499 Pfam PF02321 Outer membrane efflux protein 286 464 6.1E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 SMART SM00382 90 243 2.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30285 fca256b9e6739220331c90f54325090d 454 Gene3D G3DSA:3.30.230.10 240 454 2.7E-43 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS30285 fca256b9e6739220331c90f54325090d 454 Pfam PF13481 AAA domain 83 221 1.3E-17 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 SUPERFAMILY SSF54211 254 268 8.72E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS30285 fca256b9e6739220331c90f54325090d 454 SUPERFAMILY SSF54211 302 453 8.72E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS30285 fca256b9e6739220331c90f54325090d 454 PRINTS PR01874 DNA repair protein radA signature 173 197 1.9E-94 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 PRINTS PR01874 DNA repair protein radA signature 123 140 1.9E-94 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 PRINTS PR01874 DNA repair protein radA signature 247 273 1.9E-94 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 PRINTS PR01874 DNA repair protein radA signature 212 240 1.9E-94 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 PRINTS PR01874 DNA repair protein radA signature 321 344 1.9E-94 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 PRINTS PR01874 DNA repair protein radA signature 10 34 1.9E-94 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 PRINTS PR01874 DNA repair protein radA signature 82 110 1.9E-94 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 450 4.0E-194 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 SUPERFAMILY SSF52540 68 288 1.24E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30285 fca256b9e6739220331c90f54325090d 454 Gene3D G3DSA:3.40.50.300 60 239 8.2E-21 T 28-03-2018 AL504_RS30285 fca256b9e6739220331c90f54325090d 454 Hamap MF_01498 DNA repair protein RadA [radA]. 21 454 43.699 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 SUPERFAMILY SSF46785 17 125 4.46E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 Gene3D G3DSA:1.10.10.10 14 98 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 Gene3D G3DSA:3.40.190.10 197 283 2.5E-6 T 28-03-2018 AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 Gene3D G3DSA:3.40.190.10 104 196 1.8E-21 T 28-03-2018 AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 Pfam PF03466 LysR substrate binding domain 102 306 1.1E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 77 5.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11040 3dbb1e531170abf77e11dd3c8aff3a5e 314 SUPERFAMILY SSF53850 103 307 8.15E-28 T 28-03-2018 AL504_RS10185 6fc3c481219afeb622807c4aa72ed8b6 203 Pfam PF03942 DTW domain 3 181 1.4E-42 T 28-03-2018 IPR005636 DTW AL504_RS10185 6fc3c481219afeb622807c4aa72ed8b6 203 SMART SM01144 2 187 1.7E-60 T 28-03-2018 IPR005636 DTW AL504_RS06435 3efe95cf97e9bf862240e354da266c42 253 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL504_RS06435 3efe95cf97e9bf862240e354da266c42 253 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-6 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL504_RS06435 3efe95cf97e9bf862240e354da266c42 253 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 248 3.9E-17 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL504_RS06435 3efe95cf97e9bf862240e354da266c42 253 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 122 2.8E-30 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL504_RS06435 3efe95cf97e9bf862240e354da266c42 253 SUPERFAMILY SSF117143 78 211 6.28E-13 T 28-03-2018 AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 PIRSF PIRSF000525 1 377 6.6E-138 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 Gene3D G3DSA:3.90.1150.10 275 375 7.9E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 Pfam PF00266 Aminotransferase class-V 6 364 2.6E-43 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 6 376 1.2E-137 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 Gene3D G3DSA:3.40.640.10 17 274 2.0E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 204 223 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 376 48.065 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL504_RS11440 63b4d3ba0f23a5e61f9b3fa45b2a277c 377 SUPERFAMILY SSF53383 5 376 4.17E-104 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 SUPERFAMILY SSF55874 188 354 1.57E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 Gene3D G3DSA:1.10.287.130 109 209 3.3E-6 T 28-03-2018 AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 243 352 3.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 SMART SM00388 131 201 2.5E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 SMART SM00387 243 354 1.0E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 SUPERFAMILY SSF47384 126 197 8.63E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 Gene3D G3DSA:3.30.565.10 210 360 1.1E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 313 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 332 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12840 d9f31ead66d0a2112fa79f43abb06859 360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 197 1.2E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS26300 1d22bc0fae66632b03f629bbe56a7e9c 336 Pfam PF04773 FecR protein 127 218 1.5E-20 T 28-03-2018 IPR006860 FecR protein AL504_RS26300 1d22bc0fae66632b03f629bbe56a7e9c 336 PIRSF PIRSF018266 7 336 1.9E-89 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS26300 1d22bc0fae66632b03f629bbe56a7e9c 336 Pfam PF16220 Domain of unknown function (DUF4880) 19 57 1.9E-15 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.078 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 4.8E-62 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 Gene3D G3DSA:3.30.230.40 2 88 7.7E-35 T 28-03-2018 AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 SUPERFAMILY SSF54211 1 85 1.23E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 Gene3D G3DSA:3.30.230.40 90 195 1.1E-31 T 28-03-2018 AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 SUPERFAMILY SSF54211 87 179 1.19E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS18000 63b1920edbef4c5f7328ebb03609a4dd 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL504_RS04265 b1912c27bee1d177cbe34ec8e1f23422 301 SUPERFAMILY SSF141868 25 261 4.45E-67 T 28-03-2018 IPR001633 EAL domain AL504_RS04265 b1912c27bee1d177cbe34ec8e1f23422 301 Gene3D G3DSA:3.20.20.450 4 260 7.5E-71 T 28-03-2018 IPR001633 EAL domain AL504_RS04265 b1912c27bee1d177cbe34ec8e1f23422 301 SMART SM00052 10 256 2.3E-61 T 28-03-2018 IPR001633 EAL domain AL504_RS04265 b1912c27bee1d177cbe34ec8e1f23422 301 Pfam PF00563 EAL domain 26 251 5.7E-61 T 28-03-2018 IPR001633 EAL domain AL504_RS13575 54241e1b427194ae3635214e20744747 250 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 231 1.1E-38 T 28-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AL504_RS13575 54241e1b427194ae3635214e20744747 250 PIRSF PIRSF037208 3 243 5.3E-88 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AL504_RS13575 54241e1b427194ae3635214e20744747 250 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 1.0E-19 T 28-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AL504_RS13575 54241e1b427194ae3635214e20744747 250 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 240 44.952 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AL504_RS13575 54241e1b427194ae3635214e20744747 250 SUPERFAMILY SSF55729 83 241 4.4E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 396 1.3E-183 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 51.095 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 SUPERFAMILY SSF53686 10 395 3.01E-142 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 PIRSF PIRSF001413 3 402 1.7E-162 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 Gene3D G3DSA:3.40.50.1100 207 402 1.5E-39 T 28-03-2018 AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 5.5E-50 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS00410 1b50028fa2b1e294bf8e46fc08a4f479 402 Gene3D G3DSA:3.40.50.1100 16 206 3.6E-43 T 28-03-2018 AL504_RS07645 c57f409a6018873415a6de14345e373a 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 384 7.8E-78 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS07645 c57f409a6018873415a6de14345e373a 393 SUPERFAMILY SSF111369 67 311 2.75E-63 T 28-03-2018 AL504_RS07645 c57f409a6018873415a6de14345e373a 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 303 2.6E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS07645 c57f409a6018873415a6de14345e373a 393 Gene3D G3DSA:2.40.50.100 180 355 3.6E-4 T 28-03-2018 AL504_RS07645 c57f409a6018873415a6de14345e373a 393 Gene3D G3DSA:1.10.287.470 133 179 1.5E-10 T 28-03-2018 AL504_RS07645 c57f409a6018873415a6de14345e373a 393 Gene3D G3DSA:2.40.50.100 78 132 4.1E-18 T 28-03-2018 AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 SUPERFAMILY SSF52540 356 520 1.5E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 Gene3D G3DSA:3.40.50.300 310 535 1.4E-31 T 28-03-2018 AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 Pfam PF00005 ABC transporter 358 485 1.2E-15 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 Pfam PF00005 ABC transporter 34 171 3.4E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 SMART SM00382 364 531 1.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 SMART SM00382 30 216 1.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 SUPERFAMILY SSF52540 7 221 6.96E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23320 6d8048bb0c3afd57bc597cdbbc0b0685 537 Gene3D G3DSA:3.40.50.300 2 309 1.7E-45 T 28-03-2018 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 SUPERFAMILY SSF55103 710 818 2.94E-27 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF13183 4Fe-4S dicluster domain 852 930 8.4E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Gene3D G3DSA:1.10.1060.10 822 952 7.1E-13 T 28-03-2018 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF02754 Cysteine-rich domain 1061 1150 4.9E-7 T 28-03-2018 IPR004017 Cysteine-rich domain AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF02754 Cysteine-rich domain 1186 1272 0.0013 T 28-03-2018 IPR004017 Cysteine-rich domain AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 SUPERFAMILY SSF55103 458 619 6.05E-16 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 SUPERFAMILY SSF46548 824 946 3.14E-13 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF11880 Domain of unknown function (DUF3400) 1275 1319 1.9E-24 T 28-03-2018 IPR021817 Protein of unknown function DUF3400 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF01565 FAD binding domain 194 339 2.7E-26 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF12447 Protein of unknown function (DUF3683) 21 144 5.7E-50 T 28-03-2018 IPR022153 Protein of unknown function DUF3683 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 916 927 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF02913 FAD linked oxidases, C-terminal domain 459 576 5.4E-4 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Pfam PF02913 FAD linked oxidases, C-terminal domain 718 815 1.8E-17 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Gene3D G3DSA:3.30.465.10 261 447 2.5E-20 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 Gene3D G3DSA:3.30.43.10 143 246 2.4E-14 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS21210 3f804e62c9a75a08c74e2000bd6797d6 1319 SUPERFAMILY SSF56176 156 425 3.64E-53 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Gene3D G3DSA:3.40.120.10 267 367 2.3E-26 T 28-03-2018 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 SUPERFAMILY SSF53738 263 358 6.67E-33 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Gene3D G3DSA:3.30.310.50 368 466 2.4E-13 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 1.6E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 104 118 1.6E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 1.6E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 1.6E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 173 259 3.8E-23 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 SUPERFAMILY SSF55957 372 466 2.44E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 16 129 1.6E-29 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Gene3D G3DSA:3.40.120.10 13 147 2.1E-30 T 28-03-2018 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 SUPERFAMILY SSF53738 161 261 8.24E-28 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Gene3D G3DSA:3.40.120.10 159 266 1.1E-29 T 28-03-2018 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 372 2.5E-23 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 455 6.9E-10 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 105 114 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS28485 bec901c4999fb7f2631327796987fadb 467 SUPERFAMILY SSF53738 12 139 3.69E-35 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 Pfam PF01568 Molydopterin dinucleotide binding domain 698 814 2.2E-15 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 SUPERFAMILY SSF50692 632 662 1.28E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 SUPERFAMILY SSF50692 692 821 1.28E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 SUPERFAMILY SSF53706 1 653 2.75E-231 T 28-03-2018 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 Gene3D G3DSA:3.40.228.10 561 642 2.4E-10 T 28-03-2018 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 Gene3D G3DSA:3.40.50.740 283 461 1.4E-25 T 28-03-2018 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 Pfam PF00384 Molybdopterin oxidoreductase 12 390 2.6E-20 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 820 0.0 T 28-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 Gene3D G3DSA:3.40.228.10 1 282 1.5E-71 T 28-03-2018 AL504_RS17230 0a04451ac385b066e331dadd69dd9966 821 Gene3D G3DSA:2.40.40.20 643 820 2.6E-38 T 28-03-2018 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 Gene3D G3DSA:1.10.10.60 228 275 5.6E-17 T 28-03-2018 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 Gene3D G3DSA:2.60.120.280 19 165 1.9E-8 T 28-03-2018 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 SUPERFAMILY SSF46689 225 273 3.09E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 Pfam PF12833 Helix-turn-helix domain 195 273 1.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 SMART SM00342 189 272 4.5E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 6.8E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 6.8E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 Pfam PF02311 AraC-like ligand binding domain 15 146 3.4E-19 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 SUPERFAMILY SSF51215 25 154 1.96E-18 T 28-03-2018 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 Gene3D G3DSA:1.10.10.60 170 227 2.3E-12 T 28-03-2018 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS16885 25f17ebc21974bfd5e2be465d05d3791 275 SUPERFAMILY SSF46689 176 223 1.7E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 22 664 8.4E-219 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Pfam PF01751 Toprim domain 440 553 1.1E-11 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Gene3D G3DSA:3.30.565.10 35 237 7.6E-60 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 SMART SM00387 46 194 3.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 365 388 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 44 57 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 213 234 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 389 414 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 195 212 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 338 353 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 475 496 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR01098 Topoisomerase IV subunit B signature 321 337 2.1E-39 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Gene3D G3DSA:3.30.230.10 238 418 2.0E-30 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Gene3D G3DSA:3.40.50.670 422 667 2.3E-78 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 SUPERFAMILY SSF54211 239 414 3.03E-36 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 ProSitePatterns PS00177 DNA topoisomerase II signature. 443 451 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 SUPERFAMILY SSF56719 416 661 6.8E-74 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Pfam PF00204 DNA gyrase B 239 412 2.1E-32 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 SMART SM00433 51 664 3.1E-186 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 20 668 44.539 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 52 192 7.4E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 SUPERFAMILY SSF55874 22 236 3.54E-60 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 596 660 3.6E-26 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 49 64 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 528 545 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 600 616 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 293 306 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 548 560 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 441 455 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 130 144 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 84 97 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09310 81f1e50194b40e9dfc8062c645ec41d4 670 PRINTS PR00418 DNA topoisomerase II family signature 510 526 3.1E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS14590 81ac7683477b458e664d8b2dffbafcf7 719 Pfam PF00664 ABC transporter transmembrane region 156 417 6.0E-16 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS14590 81ac7683477b458e664d8b2dffbafcf7 719 Gene3D G3DSA:3.40.50.300 466 699 2.5E-56 T 28-03-2018 AL504_RS14590 81ac7683477b458e664d8b2dffbafcf7 719 SUPERFAMILY SSF90123 145 446 4.32E-38 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS14590 81ac7683477b458e664d8b2dffbafcf7 719 SMART SM00382 494 681 1.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS14590 81ac7683477b458e664d8b2dffbafcf7 719 Gene3D G3DSA:1.20.1560.10 143 452 7.5E-22 T 28-03-2018 AL504_RS14590 81ac7683477b458e664d8b2dffbafcf7 719 Pfam PF00005 ABC transporter 489 634 2.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS14590 81ac7683477b458e664d8b2dffbafcf7 719 SUPERFAMILY SSF52540 461 693 1.49E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26255 53e5419037746e011addc7dbec5ad9f1 244 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 225 2.7E-51 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS26255 53e5419037746e011addc7dbec5ad9f1 244 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL504_RS26255 53e5419037746e011addc7dbec5ad9f1 244 Gene3D G3DSA:3.90.226.10 1 243 5.1E-62 T 28-03-2018 AL504_RS26255 53e5419037746e011addc7dbec5ad9f1 244 SUPERFAMILY SSF52096 7 235 9.67E-66 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 Gene3D G3DSA:1.10.10.10 6 88 7.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 Gene3D G3DSA:3.40.190.10 92 177 1.2E-8 T 28-03-2018 AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 Gene3D G3DSA:3.40.190.10 178 263 4.9E-20 T 28-03-2018 AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 SUPERFAMILY SSF53850 92 293 2.71E-36 T 28-03-2018 AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 Pfam PF03466 LysR substrate binding domain 90 291 2.5E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS10485 da0e986c26b4aa40a9eee126d812f5e4 306 SUPERFAMILY SSF46785 3 83 1.47E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Gene3D G3DSA:3.90.740.10 237 470 3.9E-53 T 28-03-2018 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 228 420 5.3E-65 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 590 4.0E-8 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Gene3D G3DSA:3.40.50.620 1 236 7.5E-68 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 26 884 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Pfam PF09334 tRNA synthetases class I (M) 44 177 1.7E-17 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 SUPERFAMILY SSF47323 682 884 9.16E-29 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 885 22.395 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 PRINTS PR00985 Leucyl-tRNA synthetase signature 191 204 1.8E-48 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 PRINTS PR00985 Leucyl-tRNA synthetase signature 576 586 1.8E-48 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 PRINTS PR00985 Leucyl-tRNA synthetase signature 159 175 1.8E-48 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 1.8E-48 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 PRINTS PR00985 Leucyl-tRNA synthetase signature 543 565 1.8E-48 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 PRINTS PR00985 Leucyl-tRNA synthetase signature 222 241 1.8E-48 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 PRINTS PR00985 Leucyl-tRNA synthetase signature 133 150 1.8E-48 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Pfam PF08264 Anticodon-binding domain of tRNA 724 847 8.8E-14 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 SUPERFAMILY SSF50677 234 432 3.24E-50 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 Gene3D G3DSA:1.10.730.10 631 885 1.1E-49 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 SUPERFAMILY SSF52374 434 687 1.42E-143 T 28-03-2018 AL504_RS26850 8074dedc9e018fa908c2ed1286e37f53 885 SUPERFAMILY SSF52374 7 233 1.42E-143 T 28-03-2018 AL504_RS08620 a243354feb95098d7923ae366634a834 355 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 PIRSF PIRSF001456 3 353 2.9E-132 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 SUPERFAMILY SSF103263 4 351 6.41E-144 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 Pfam PF01264 Chorismate synthase 10 345 7.3E-133 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 3.6E-136 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 Gene3D G3DSA:3.60.150.10 3 354 8.6E-151 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.722 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS08620 a243354feb95098d7923ae366634a834 355 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL504_RS21485 1952d717c3e41978a57a93b4b2fc4580 552 Pfam PF00221 Aromatic amino acid lyase 32 522 1.0E-126 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL504_RS21485 1952d717c3e41978a57a93b4b2fc4580 552 SUPERFAMILY SSF48557 21 547 4.32E-130 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS21485 1952d717c3e41978a57a93b4b2fc4580 552 Gene3D G3DSA:1.10.275.10 16 225 9.9E-53 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS21485 1952d717c3e41978a57a93b4b2fc4580 552 Gene3D G3DSA:1.20.200.10 228 551 1.1E-81 T 28-03-2018 AL504_RS28580 0227f4b3d637e09b6733c8cb849fb8a5 530 Pfam PF15984 Bacterial collagen, middle region 66 184 1.1E-14 T 28-03-2018 IPR031929 Bacterial collagen-like protein, middle domain AL504_RS28580 0227f4b3d637e09b6733c8cb849fb8a5 530 Pfam PF15984 Bacterial collagen, middle region 195 344 1.2E-9 T 28-03-2018 IPR031929 Bacterial collagen-like protein, middle domain AL504_RS28580 0227f4b3d637e09b6733c8cb849fb8a5 530 Gene3D G3DSA:1.20.5.1230 249 511 0.0045 T 28-03-2018 AL504_RS28580 0227f4b3d637e09b6733c8cb849fb8a5 530 Gene3D G3DSA:1.20.5.1230 72 248 0.015 T 28-03-2018 AL504_RS12065 2f49c133fc33aa0330c481b4ccd14243 305 SUPERFAMILY SSF51430 32 294 5.63E-49 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS12065 2f49c133fc33aa0330c481b4ccd14243 305 Pfam PF00248 Aldo/keto reductase family 47 287 1.9E-31 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS12065 2f49c133fc33aa0330c481b4ccd14243 305 Gene3D G3DSA:3.20.20.100 28 304 1.9E-48 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS22960 6b609ef5a7b338ca89138215b297c93d 288 Pfam PF13508 Acetyltransferase (GNAT) domain 183 263 1.6E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS22960 6b609ef5a7b338ca89138215b297c93d 288 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 119 6.7E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS22960 6b609ef5a7b338ca89138215b297c93d 288 Gene3D G3DSA:3.40.630.30 136 268 2.1E-22 T 28-03-2018 AL504_RS22960 6b609ef5a7b338ca89138215b297c93d 288 SUPERFAMILY SSF55729 140 269 4.18E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS22960 6b609ef5a7b338ca89138215b297c93d 288 SUPERFAMILY SSF54593 5 123 1.75E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS22960 6b609ef5a7b338ca89138215b297c93d 288 Gene3D G3DSA:3.10.180.10 1 130 1.6E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Pfam PF13426 PAS domain 157 258 1.5E-13 T 28-03-2018 IPR000014 PAS domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Pfam PF08447 PAS fold 44 129 1.4E-8 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SUPERFAMILY SSF55785 154 258 5.06E-16 T 28-03-2018 IPR000014 PAS domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SUPERFAMILY SSF141868 609 856 1.07E-82 T 28-03-2018 IPR001633 EAL domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SMART SM00267 422 593 4.2E-72 T 28-03-2018 IPR000160 GGDEF domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Pfam PF00990 Diguanylate cyclase, GGDEF domain 433 589 1.0E-49 T 28-03-2018 IPR000160 GGDEF domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 431 591 7.8E-45 T 28-03-2018 IPR000160 GGDEF domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SMART SM00086 95 133 0.73 T 28-03-2018 IPR001610 PAC motif AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SMART SM00086 218 260 3.7 T 28-03-2018 IPR001610 PAC motif AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SUPERFAMILY SSF55785 33 131 4.19E-15 T 28-03-2018 IPR000014 PAS domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Gene3D G3DSA:3.20.20.450 601 858 6.3E-95 T 28-03-2018 IPR001633 EAL domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SUPERFAMILY SSF55781 282 433 7.46E-24 T 28-03-2018 IPR029016 GAF domain-like AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Pfam PF00563 EAL domain 609 844 2.1E-70 T 28-03-2018 IPR001633 EAL domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SMART SM00065 279 430 2.1E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Pfam PF13185 GAF domain 278 421 2.1E-15 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 261 4.1E-11 T 28-03-2018 IPR000014 PAS domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SMART SM00052 603 849 5.2E-107 T 28-03-2018 IPR001633 EAL domain AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Gene3D G3DSA:3.30.450.40 269 429 4.0E-22 T 28-03-2018 IPR029016 GAF domain-like AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Gene3D G3DSA:3.30.70.270 430 600 3.0E-66 T 28-03-2018 AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Gene3D G3DSA:3.30.450.20 18 139 1.1E-16 T 28-03-2018 AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SUPERFAMILY SSF55073 438 594 1.1E-52 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 PIRSF PIRSF005925 22 142 19.0 T 28-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 PIRSF PIRSF005925 133 858 1.4E-274 T 28-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 Gene3D G3DSA:3.30.450.20 140 268 5.1E-20 T 28-03-2018 AL504_RS16035 c6bfa9a42bd11a22dffd71afa7a09ced 858 SMART SM00091 145 212 2.3E-5 T 28-03-2018 IPR000014 PAS domain AL504_RS03375 5ac12aeef78fb710c816db6921dbd235 373 Pfam PF01497 Periplasmic binding protein 80 315 8.9E-24 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS03375 5ac12aeef78fb710c816db6921dbd235 373 SUPERFAMILY SSF53807 29 361 1.33E-52 T 28-03-2018 AL504_RS03375 5ac12aeef78fb710c816db6921dbd235 373 Gene3D G3DSA:3.40.50.1980 24 165 1.7E-22 T 28-03-2018 AL504_RS03375 5ac12aeef78fb710c816db6921dbd235 373 Gene3D G3DSA:3.40.50.1980 166 347 4.2E-43 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 Gene3D G3DSA:3.30.2090.10 182 277 2.9E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 Gene3D G3DSA:1.20.1640.10 813 1029 5.1E-39 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 Gene3D G3DSA:3.30.70.1430 570 668 6.0E-18 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82693 38 131 7.5E-24 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 Gene3D G3DSA:3.30.2090.10 721 809 1.3E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 Gene3D G3DSA:3.30.70.1430 38 140 1.2E-26 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 Gene3D G3DSA:1.20.1640.10 289 512 1.4E-49 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82714 185 273 2.09E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82714 722 808 1.31E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82693 137 184 1.83E-23 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82693 276 332 1.83E-23 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82866 298 499 1.83E-51 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82693 568 671 2.35E-27 T 28-03-2018 AL504_RS05970 cd86bbaaa0dadc6a36056893bfa148db 1047 SUPERFAMILY SSF82866 806 1028 4.19E-46 T 28-03-2018 AL504_RS20295 62b7fd4c2673c5ce82b4c59195693f21 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 1.0E-77 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL504_RS20295 62b7fd4c2673c5ce82b4c59195693f21 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 1.1E-73 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL504_RS20295 62b7fd4c2673c5ce82b4c59195693f21 181 SUPERFAMILY SSF51182 1 179 1.98E-76 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS20295 62b7fd4c2673c5ce82b4c59195693f21 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 177 2.3E-84 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL504_RS20295 62b7fd4c2673c5ce82b4c59195693f21 181 Gene3D G3DSA:2.60.120.10 1 180 3.6E-77 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS25455 505b6926f585d6da4ab0aaea56d6c2c6 210 Gene3D G3DSA:3.90.550.10 8 210 2.5E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS25455 505b6926f585d6da4ab0aaea56d6c2c6 210 Pfam PF12804 MobA-like NTP transferase domain 15 168 2.6E-35 T 28-03-2018 IPR025877 MobA-like NTP transferase AL504_RS25455 505b6926f585d6da4ab0aaea56d6c2c6 210 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 14 202 3.1E-61 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL504_RS25455 505b6926f585d6da4ab0aaea56d6c2c6 210 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 11 204 27.91 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL504_RS25455 505b6926f585d6da4ab0aaea56d6c2c6 210 SUPERFAMILY SSF53448 12 201 6.08E-34 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS05740 6168955b60770bc5afc49447a577d77d 273 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS05740 6168955b60770bc5afc49447a577d77d 273 Gene3D G3DSA:3.40.190.10 25 130 7.1E-29 T 28-03-2018 AL504_RS05740 6168955b60770bc5afc49447a577d77d 273 SMART SM00062 35 257 1.7E-58 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS05740 6168955b60770bc5afc49447a577d77d 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 255 1.2E-54 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS05740 6168955b60770bc5afc49447a577d77d 273 SUPERFAMILY SSF53850 1 256 3.01E-58 T 28-03-2018 AL504_RS05740 6168955b60770bc5afc49447a577d77d 273 Gene3D G3DSA:3.40.190.10 131 219 6.9E-18 T 28-03-2018 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 SUPERFAMILY SSF46955 1 126 9.16E-38 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 Gene3D G3DSA:1.10.1660.10 56 130 1.3E-18 T 28-03-2018 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.5E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.5E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.5E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 Gene3D G3DSA:1.10.1660.10 1 55 1.9E-23 T 28-03-2018 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.0E-54 T 28-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 SMART SM00422 1 70 4.2E-31 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 Pfam PF00376 MerR family regulatory protein 2 39 4.2E-16 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS05145 a2aade40e9c1b5af7031baca19d8b37a 130 Pfam PF09278 MerR, DNA binding 44 108 4.9E-17 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 SMART SM00895 98 226 3.6E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 SUPERFAMILY SSF48008 97 234 2.62E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 Gene3D G3DSA:1.20.120.530 84 240 1.2E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 SMART SM00345 16 75 1.5E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 Pfam PF07729 FCD domain 99 224 1.4E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 4.4E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 4.4E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 6.6E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 Gene3D G3DSA:1.10.10.10 4 77 5.1E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03420 113dff9e2a39921a78ab5b4a160aa474 240 SUPERFAMILY SSF46785 7 79 2.21E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 Gene3D G3DSA:2.40.50.100 186 254 1.2E-21 T 28-03-2018 AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 SUPERFAMILY SSF46785 2 104 5.24E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 PIRSF PIRSF005763 1 264 8.1E-98 T 28-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 Gene3D G3DSA:1.10.10.10 3 108 8.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 Gene3D G3DSA:2.40.50.100 122 185 5.7E-20 T 28-03-2018 AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 84 4.1E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 SUPERFAMILY SSF50331 195 262 2.43E-21 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 SUPERFAMILY SSF50331 123 191 4.62E-21 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 Pfam PF03459 TOBE domain 125 188 5.3E-16 T 28-03-2018 IPR005116 Transport-associated OB, type 1 AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 Pfam PF03459 TOBE domain 198 260 1.1E-16 T 28-03-2018 IPR005116 Transport-associated OB, type 1 AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 19 104 3.1E-29 T 28-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 190 5.0E-24 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AL504_RS27090 b3ab4dd70869c67ec1cc2bf97351ecf3 264 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 195 261 8.5E-21 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AL504_RS30165 3031b1d2dd6f26acb8f9101a930467f0 396 SUPERFAMILY SSF51905 1 144 2.48E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS30165 3031b1d2dd6f26acb8f9101a930467f0 396 SUPERFAMILY SSF51905 120 262 1.04E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS30165 3031b1d2dd6f26acb8f9101a930467f0 396 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 129 2.0E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS30165 3031b1d2dd6f26acb8f9101a930467f0 396 Gene3D G3DSA:3.50.50.60 1 22 0.021 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS30165 3031b1d2dd6f26acb8f9101a930467f0 396 Gene3D G3DSA:3.50.50.60 120 262 1.2E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS30165 3031b1d2dd6f26acb8f9101a930467f0 396 Gene3D G3DSA:3.50.50.60 23 110 1.9E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS00395 1cdeb1ca342a07c6561e781f085a8173 253 Pfam PF01925 Sulfite exporter TauE/SafE 13 243 1.9E-28 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 978 995 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 SUPERFAMILY SSF56935 909 995 1.41E-76 T 28-03-2018 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 SUPERFAMILY SSF56935 104 298 1.41E-76 T 28-03-2018 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 SUPERFAMILY SSF56935 671 879 1.41E-76 T 28-03-2018 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 SUPERFAMILY SSF56935 326 576 1.41E-76 T 28-03-2018 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 228 1.7E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 Gene3D G3DSA:2.40.170.20 247 995 4.5E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 111 995 2.2E-108 T 28-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 Pfam PF00593 TonB dependent receptor 348 994 7.2E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 107 995 4.7E-143 T 28-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL504_RS22375 50efe781a074a6c7207c0ed8ff93e035 995 Gene3D G3DSA:2.170.130.10 99 236 3.0E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00565 48f39d8806d471eb0cacbb7b996302ef 305 Gene3D G3DSA:3.40.190.10 185 271 4.3E-9 T 28-03-2018 AL504_RS00565 48f39d8806d471eb0cacbb7b996302ef 305 Pfam PF03466 LysR substrate binding domain 89 300 5.5E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00565 48f39d8806d471eb0cacbb7b996302ef 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.0E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00565 48f39d8806d471eb0cacbb7b996302ef 305 Gene3D G3DSA:1.10.10.10 1 83 6.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00565 48f39d8806d471eb0cacbb7b996302ef 305 SUPERFAMILY SSF53850 90 301 2.17E-20 T 28-03-2018 AL504_RS00565 48f39d8806d471eb0cacbb7b996302ef 305 SUPERFAMILY SSF46785 1 83 4.83E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00565 48f39d8806d471eb0cacbb7b996302ef 305 Gene3D G3DSA:3.40.190.10 88 184 5.6E-8 T 28-03-2018 AL504_RS09725 5600fc5ae4b7455ae7fa14b48c08ba69 152 SUPERFAMILY SSF103370 7 145 8.24E-12 T 28-03-2018 IPR008711 Recombinase NinB AL504_RS09725 5600fc5ae4b7455ae7fa14b48c08ba69 152 Pfam PF05772 NinB protein 9 66 1.9E-6 T 28-03-2018 IPR008711 Recombinase NinB AL504_RS09725 5600fc5ae4b7455ae7fa14b48c08ba69 152 Gene3D G3DSA:1.10.3790.10 6 152 1.0E-24 T 28-03-2018 IPR008711 Recombinase NinB AL504_RS12195 b8dbe14cfc8b39abfea0f14672622e0e 261 SUPERFAMILY SSF55846 27 184 5.76E-48 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS12195 b8dbe14cfc8b39abfea0f14672622e0e 261 Gene3D G3DSA:1.10.101.10 183 261 3.1E-14 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS12195 b8dbe14cfc8b39abfea0f14672622e0e 261 SMART SM00644 28 168 8.8E-28 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS12195 b8dbe14cfc8b39abfea0f14672622e0e 261 Pfam PF01471 Putative peptidoglycan binding domain 203 257 4.8E-10 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS12195 b8dbe14cfc8b39abfea0f14672622e0e 261 Gene3D G3DSA:3.40.80.10 38 182 7.8E-43 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS12195 b8dbe14cfc8b39abfea0f14672622e0e 261 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 38 169 2.8E-28 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS12195 b8dbe14cfc8b39abfea0f14672622e0e 261 SUPERFAMILY SSF47090 192 260 4.51E-19 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS01545 e5dca94fcee19ef5a82672d5cf59369f 221 Pfam PF01584 CheW-like domain 74 215 6.8E-19 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01545 e5dca94fcee19ef5a82672d5cf59369f 221 Gene3D G3DSA:2.30.30.40 162 207 4.0E-5 T 28-03-2018 AL504_RS01545 e5dca94fcee19ef5a82672d5cf59369f 221 Gene3D G3DSA:2.40.50.180 90 161 3.8E-12 T 28-03-2018 AL504_RS01545 e5dca94fcee19ef5a82672d5cf59369f 221 SUPERFAMILY SSF50341 71 217 2.35E-23 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01545 e5dca94fcee19ef5a82672d5cf59369f 221 SMART SM00260 69 213 4.2E-8 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 Pfam PF03466 LysR substrate binding domain 88 288 9.9E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 SUPERFAMILY SSF53850 90 291 5.61E-39 T 28-03-2018 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 Gene3D G3DSA:3.40.190.10 89 172 9.9E-15 T 28-03-2018 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 Gene3D G3DSA:1.10.10.10 6 87 1.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 Gene3D G3DSA:3.40.190.10 173 257 4.2E-21 T 28-03-2018 AL504_RS14825 fe5bec6957602d84ec935d0739d4c57b 300 SUPERFAMILY SSF46785 2 87 2.04E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20955 5e8ad7ac038bcbc7c05593d93ad4fcef 262 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AL504_RS20955 5e8ad7ac038bcbc7c05593d93ad4fcef 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 256 4.8E-73 T 28-03-2018 AL504_RS20955 5e8ad7ac038bcbc7c05593d93ad4fcef 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 258 2.3E-77 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AL504_RS20955 5e8ad7ac038bcbc7c05593d93ad4fcef 262 Gene3D G3DSA:3.60.10.10 1 262 1.4E-53 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS20955 5e8ad7ac038bcbc7c05593d93ad4fcef 262 SUPERFAMILY SSF56219 2 259 3.8E-75 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS20955 5e8ad7ac038bcbc7c05593d93ad4fcef 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 251 3.2E-19 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.30.559.10 18 250 3.0E-39 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.30.559.10 1088 1296 7.0E-31 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.30.559.10 1528 1753 2.9E-40 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF00668 Condensation domain 1099 1524 2.4E-69 T 28-03-2018 IPR001242 Condensation domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF00668 Condensation domain 48 479 8.7E-83 T 28-03-2018 IPR001242 Condensation domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF00668 Condensation domain 1556 1972 2.2E-69 T 28-03-2018 IPR001242 Condensation domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2160 2171 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2550 2565 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 534 941 4.8E-138 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2039 2446 8.7E-138 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.30.300.30 2417 2529 2.7E-40 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.30.300.30 912 1026 1.3E-40 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF52777 232 474 1.02E-49 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF47336 2518 2589 5.1E-19 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF56801 512 1033 8.11E-160 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF52777 1554 1735 6.6E-41 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1401 1545 1.6E-33 T 28-03-2018 IPR010060 Non-ribosomal peptide synthase AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF56801 2017 2538 1.96E-160 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.40.50.980 2164 2321 1.8E-44 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.40.50.980 505 660 2.7E-46 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.40.50.980 2010 2163 2.4E-47 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF52777 49 226 1.11E-44 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SMART SM00823 Phosphopantetheine attachment site 1021 1089 7.1E-4 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SMART SM00823 Phosphopantetheine attachment site 2526 2597 0.001 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:1.10.1200.10 1027 1087 3.5E-24 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 ProSitePatterns PS00455 Putative AMP-binding domain signature. 655 666 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1045 1060 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:3.40.50.980 661 822 8.9E-40 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF47336 1013 1083 2.36E-19 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF52777 1282 1523 3.11E-39 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF52777 1739 1979 1.78E-45 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF00550 Phosphopantetheine attachment site 2529 2589 3.0E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF00550 Phosphopantetheine attachment site 1023 1083 1.0E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:2.30.38.10 827 907 1.5E-25 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:2.30.38.10 2332 2412 2.0E-24 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF00501 AMP-binding enzyme 515 917 2.2E-101 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF00501 AMP-binding enzyme 2020 2422 1.3E-101 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 SUPERFAMILY SSF52777 1096 1271 2.78E-38 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Gene3D G3DSA:1.10.1200.10 2530 2602 2.6E-20 T 28-03-2018 AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF13193 AMP-binding enzyme C-terminal domain 2430 2501 6.1E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03225 b6a5eddd7d3e402b25d289ca5e4a27cb 2624 Pfam PF13193 AMP-binding enzyme C-terminal domain 925 996 5.8E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS20530 81272eddd3962f7dada97109048161d9 186 Gene3D G3DSA:1.20.1200.10 17 183 7.4E-64 T 28-03-2018 AL504_RS20530 81272eddd3962f7dada97109048161d9 186 Pfam PF01923 Cobalamin adenosyltransferase 8 165 1.3E-57 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL504_RS20530 81272eddd3962f7dada97109048161d9 186 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 7.2E-62 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL504_RS20530 81272eddd3962f7dada97109048161d9 186 SUPERFAMILY SSF89028 8 178 1.77E-59 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL504_RS20530 81272eddd3962f7dada97109048161d9 186 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 26 177 2.0E-48 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL504_RS26600 9b49218258e25b94309cf5e915ef54ff 219 Gene3D G3DSA:3.40.50.150 16 217 4.6E-23 T 28-03-2018 AL504_RS26600 9b49218258e25b94309cf5e915ef54ff 219 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 215 1.2E-73 T 28-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL504_RS26600 9b49218258e25b94309cf5e915ef54ff 219 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 215 2.0E-79 T 28-03-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AL504_RS26600 9b49218258e25b94309cf5e915ef54ff 219 PIRSF PIRSF023956 1 219 3.9E-72 T 28-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL504_RS26600 9b49218258e25b94309cf5e915ef54ff 219 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 37.706 T 28-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL504_RS26600 9b49218258e25b94309cf5e915ef54ff 219 SUPERFAMILY SSF53335 1 215 2.64E-55 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 196 308 3.9E-10 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 12 326 2.2E-92 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 Gene3D G3DSA:3.90.650.10 151 327 1.5E-38 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 33 144 4.0E-25 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 10 323 27.231 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 SUPERFAMILY SSF56042 149 310 1.14E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 Gene3D G3DSA:3.30.1330.10 8 150 7.2E-37 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 PIRSF PIRSF005303 8 326 5.8E-73 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL504_RS23435 c6cf04e393b3d08c03855b32f24442d9 329 SUPERFAMILY SSF55326 12 144 9.72E-35 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 5.5E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.5E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 5.5E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 5.5E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 5.5E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.5E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 5.5E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 641 1.5E-214 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 Pfam PF01578 Cytochrome C assembly protein 89 295 6.8E-51 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 3.8E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07595 76ac5a19ad4dba074afc5b9db817a7bd 663 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 638 1.4E-118 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL504_RS00455 0cffb7336380bbcf121987b4bc6c6ac1 391 PIRSF PIRSF003085 18 390 4.6E-122 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL504_RS00455 0cffb7336380bbcf121987b4bc6c6ac1 391 Pfam PF02353 Mycolic acid cyclopropane synthetase 116 376 1.3E-95 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS00455 0cffb7336380bbcf121987b4bc6c6ac1 391 SUPERFAMILY SSF53335 125 381 1.5E-78 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS00455 0cffb7336380bbcf121987b4bc6c6ac1 391 Gene3D G3DSA:3.40.50.150 113 380 1.3E-63 T 28-03-2018 AL504_RS23450 2662db12019a7aaccfa8c4f40f17037a 272 SUPERFAMILY SSF51366 2 259 9.42E-74 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS23450 2662db12019a7aaccfa8c4f40f17037a 272 SMART SM00934 17 257 6.5E-53 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS23450 2662db12019a7aaccfa8c4f40f17037a 272 Gene3D G3DSA:3.20.20.70 1 272 5.8E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS23450 2662db12019a7aaccfa8c4f40f17037a 272 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 252 2.9E-69 T 28-03-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS23450 2662db12019a7aaccfa8c4f40f17037a 272 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS23450 2662db12019a7aaccfa8c4f40f17037a 272 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 248 8.0E-30 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS23450 2662db12019a7aaccfa8c4f40f17037a 272 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 270 33.534 T 28-03-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS30150 4bf3b2e520080d037e10a4a0aa63cc0c 143 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 130 4.4E-16 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL504_RS30150 4bf3b2e520080d037e10a4a0aa63cc0c 143 Gene3D G3DSA:3.10.490.10 1 142 2.0E-23 T 28-03-2018 AL504_RS30150 4bf3b2e520080d037e10a4a0aa63cc0c 143 SUPERFAMILY SSF110857 2 135 1.7E-21 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL504_RS28835 fd6938aa511194f70db4ad4289471abd 243 Pfam PF00005 ABC transporter 20 169 6.5E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28835 fd6938aa511194f70db4ad4289471abd 243 Gene3D G3DSA:3.40.50.300 1 242 1.2E-71 T 28-03-2018 AL504_RS28835 fd6938aa511194f70db4ad4289471abd 243 SUPERFAMILY SSF52540 5 229 6.05E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28835 fd6938aa511194f70db4ad4289471abd 243 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS28835 fd6938aa511194f70db4ad4289471abd 243 PIRSF PIRSF039085 1 243 2.1E-106 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS28835 fd6938aa511194f70db4ad4289471abd 243 SMART SM00382 29 217 7.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 Hamap MF_00367 GTPase Era [era]. 6 295 34.103 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 SUPERFAMILY SSF54814 181 296 2.49E-37 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 Pfam PF07650 KH domain 208 283 1.0E-15 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 6.5E-7 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 6.5E-7 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 Gene3D G3DSA:3.30.300.20 185 296 1.3E-38 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 278 1.7E-77 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 Pfam PF01926 50S ribosome-binding GTPase 11 122 1.0E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 SUPERFAMILY SSF52540 11 202 1.63E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 Gene3D G3DSA:3.40.50.300 25 177 1.2E-27 T 28-03-2018 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 Gene3D G3DSA:3.40.50.300 7 24 0.022 T 28-03-2018 AL504_RS12100 8ac9dc0476f79dbcf76a3dd05cb37774 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 168 1.6E-23 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS00780 0abd5e5991a87246bf448a94f656fa95 796 Pfam PF07715 TonB-dependent Receptor Plug Domain 164 267 3.5E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00780 0abd5e5991a87246bf448a94f656fa95 796 SMART SM00965 68 119 3.4E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS00780 0abd5e5991a87246bf448a94f656fa95 796 SUPERFAMILY SSF56935 123 796 9.85E-130 T 28-03-2018 AL504_RS00780 0abd5e5991a87246bf448a94f656fa95 796 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 165 795 2.0E-120 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS00780 0abd5e5991a87246bf448a94f656fa95 796 Gene3D G3DSA:2.40.170.20 280 796 3.1E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00780 0abd5e5991a87246bf448a94f656fa95 796 Gene3D G3DSA:2.170.130.10 121 279 2.9E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00780 0abd5e5991a87246bf448a94f656fa95 796 Pfam PF00593 TonB dependent receptor 340 795 1.2E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS27780 345d88c87bd13404b8b5be82ffc00cda 187 SUPERFAMILY SSF88946 26 100 4.71E-5 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27780 345d88c87bd13404b8b5be82ffc00cda 187 SUPERFAMILY SSF88659 110 173 1.29E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27780 345d88c87bd13404b8b5be82ffc00cda 187 Pfam PF08281 Sigma-70, region 4 116 168 8.1E-17 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27780 345d88c87bd13404b8b5be82ffc00cda 187 Gene3D G3DSA:1.10.10.10 93 179 1.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27780 345d88c87bd13404b8b5be82ffc00cda 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 172 6.0E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27780 345d88c87bd13404b8b5be82ffc00cda 187 Gene3D G3DSA:1.10.1740.10 18 87 1.5E-4 T 28-03-2018 AL504_RS03515 48dfae701a399fde0d1e995cb6e455e2 272 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 9 267 6.2E-104 T 28-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AL504_RS03515 48dfae701a399fde0d1e995cb6e455e2 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 12 265 9.7E-92 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AL504_RS03515 48dfae701a399fde0d1e995cb6e455e2 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 262 1.3E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03515 48dfae701a399fde0d1e995cb6e455e2 272 Gene3D G3DSA:1.10.3720.10 10 271 5.6E-35 T 28-03-2018 AL504_RS03515 48dfae701a399fde0d1e995cb6e455e2 272 SUPERFAMILY SSF161098 6 258 4.06E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 477 1.0E-156 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 217 229 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 SUPERFAMILY SSF50800 73 168 3.49E-23 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 PRINTS PR01050 Pyruvate kinase family signature 189 203 5.0E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 PRINTS PR01050 Pyruvate kinase family signature 274 298 5.0E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 PRINTS PR01050 Pyruvate kinase family signature 62 78 5.0E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 PRINTS PR01050 Pyruvate kinase family signature 318 334 5.0E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 PRINTS PR01050 Pyruvate kinase family signature 222 248 5.0E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 PRINTS PR01050 Pyruvate kinase family signature 249 273 5.0E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 PRINTS PR01050 Pyruvate kinase family signature 299 317 5.0E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 Gene3D G3DSA:3.20.20.60 2 82 4.3E-17 T 28-03-2018 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 SUPERFAMILY SSF51621 3 77 1.88E-90 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 SUPERFAMILY SSF51621 159 345 1.88E-90 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 Pfam PF00224 Pyruvate kinase, barrel domain 5 343 5.3E-120 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 Gene3D G3DSA:2.40.33.10 83 169 4.8E-23 T 28-03-2018 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 477 1.7E-25 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 Gene3D G3DSA:3.20.20.60 170 326 1.5E-54 T 28-03-2018 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 SUPERFAMILY SSF52935 328 479 6.8E-36 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS14395 a99f45bde2b7ee6dcd946d3208212669 480 Gene3D G3DSA:3.40.1380.20 327 480 2.5E-39 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 SUPERFAMILY SSF55073 329 488 1.8E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 SMART SM00267 313 488 1.4E-66 T 28-03-2018 IPR000160 GGDEF domain AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 Gene3D G3DSA:3.30.450.20 33 169 1.1E-15 T 28-03-2018 AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 Pfam PF02743 Cache domain 40 266 1.8E-16 T 28-03-2018 IPR033479 Double Cache domain 1 AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 Gene3D G3DSA:3.30.450.20 170 285 1.8E-10 T 28-03-2018 AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 488 2.1E-52 T 28-03-2018 IPR000160 GGDEF domain AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 484 1.1E-50 T 28-03-2018 IPR000160 GGDEF domain AL504_RS09845 c466f8a403dcb2e4ae01b9984006b1db 490 Gene3D G3DSA:3.30.70.270 317 490 2.3E-56 T 28-03-2018 AL504_RS02110 8d3da23e0ae0487245bc498aaa21a093 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 189 1.2E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS02110 8d3da23e0ae0487245bc498aaa21a093 201 Gene3D G3DSA:1.20.1050.10 98 201 2.6E-23 T 28-03-2018 AL504_RS02110 8d3da23e0ae0487245bc498aaa21a093 201 Gene3D G3DSA:3.40.30.10 1 97 8.0E-22 T 28-03-2018 AL504_RS02110 8d3da23e0ae0487245bc498aaa21a093 201 SUPERFAMILY SSF47616 84 197 3.76E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS02110 8d3da23e0ae0487245bc498aaa21a093 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 2.0E-8 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS02110 8d3da23e0ae0487245bc498aaa21a093 201 SUPERFAMILY SSF52833 1 79 6.54E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS28980 76a5772aea74ac9b6111890556353519 219 Gene3D G3DSA:1.10.10.10 131 217 1.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28980 76a5772aea74ac9b6111890556353519 219 SMART SM00421 158 215 2.0E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 Pfam PF00072 Response regulator receiver domain 6 120 3.9E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 213 5.6E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 SUPERFAMILY SSF52172 3 132 1.85E-23 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28980 76a5772aea74ac9b6111890556353519 219 SUPERFAMILY SSF46894 156 214 1.9E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 Gene3D G3DSA:3.40.50.2300 3 130 3.1E-26 T 28-03-2018 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 1.4E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 1.4E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 1.4E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28980 76a5772aea74ac9b6111890556353519 219 SMART SM00448 4 119 4.9E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS11285 7dc70b812e9c828ec08742768d9552be 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 10 302 1.6E-125 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL504_RS11285 7dc70b812e9c828ec08742768d9552be 302 PIRSF PIRSF002936 1 302 1.4E-139 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL504_RS11285 7dc70b812e9c828ec08742768d9552be 302 Gene3D G3DSA:3.40.50.620 3 268 1.3E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS11285 7dc70b812e9c828ec08742768d9552be 302 SUPERFAMILY SSF52402 7 210 3.53E-62 T 28-03-2018 AL504_RS11285 7dc70b812e9c828ec08742768d9552be 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 255 4.6E-46 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL504_RS21605 0feefb6e797243964cff5191fb2e6535 327 PIRSF PIRSF017082 1 326 2.8E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21605 0feefb6e797243964cff5191fb2e6535 327 SUPERFAMILY SSF53850 118 287 4.62E-10 T 28-03-2018 AL504_RS21605 0feefb6e797243964cff5191fb2e6535 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 323 2.2E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21605 0feefb6e797243964cff5191fb2e6535 327 Gene3D G3DSA:3.40.190.10 128 237 2.2E-9 T 28-03-2018 AL504_RS20965 851eb628c354a69657464cfdad34b3dd 192 Pfam PF01850 PIN domain 4 129 2.8E-8 T 28-03-2018 IPR002716 PIN domain AL504_RS20965 851eb628c354a69657464cfdad34b3dd 192 SUPERFAMILY SSF88723 1 129 6.17E-16 T 28-03-2018 IPR029060 PIN domain-like AL504_RS20965 851eb628c354a69657464cfdad34b3dd 192 Gene3D G3DSA:3.40.50.1010 1 140 4.6E-16 T 28-03-2018 IPR029060 PIN domain-like AL504_RS29205 9cc5af6eeb9f3646e92bca9355df71e5 454 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 282 440 1.7E-26 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AL504_RS29205 9cc5af6eeb9f3646e92bca9355df71e5 454 SUPERFAMILY SSF142764 14 441 5.75E-75 T 28-03-2018 AL504_RS29205 9cc5af6eeb9f3646e92bca9355df71e5 454 Gene3D G3DSA:3.40.50.10840 13 267 2.0E-43 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL504_RS29205 9cc5af6eeb9f3646e92bca9355df71e5 454 Pfam PF07005 Putative sugar-binding N-terminal domain 15 259 4.2E-42 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL504_RS04590 b130f0a39b6249931c66e3170e3a0abd 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 6.1E-51 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS04590 b130f0a39b6249931c66e3170e3a0abd 308 Gene3D G3DSA:1.10.3470.10 4 297 7.9E-52 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS14880 0e6798f7b09431d2907aa982abaa860c 111 PRINTS PR00606 Class ID cytochrome C signature 95 105 1.2E-13 T 28-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AL504_RS14880 0e6798f7b09431d2907aa982abaa860c 111 PRINTS PR00606 Class ID cytochrome C signature 68 81 1.2E-13 T 28-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AL504_RS14880 0e6798f7b09431d2907aa982abaa860c 111 PRINTS PR00606 Class ID cytochrome C signature 83 93 1.2E-13 T 28-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AL504_RS14880 0e6798f7b09431d2907aa982abaa860c 111 PRINTS PR00606 Class ID cytochrome C signature 29 42 1.2E-13 T 28-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AL504_RS14880 0e6798f7b09431d2907aa982abaa860c 111 SUPERFAMILY SSF46626 9 108 7.83E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS14880 0e6798f7b09431d2907aa982abaa860c 111 Gene3D G3DSA:1.10.760.10 7 110 2.5E-13 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS14880 0e6798f7b09431d2907aa982abaa860c 111 Pfam PF00034 Cytochrome c 26 106 4.5E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS00770 cfc07aed961c19b30de7366d40db92a6 391 SUPERFAMILY SSF55073 226 379 1.02E-36 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS00770 cfc07aed961c19b30de7366d40db92a6 391 SMART SM00267 210 382 3.8E-34 T 28-03-2018 IPR000160 GGDEF domain AL504_RS00770 cfc07aed961c19b30de7366d40db92a6 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 380 1.4E-32 T 28-03-2018 IPR000160 GGDEF domain AL504_RS00770 cfc07aed961c19b30de7366d40db92a6 391 Gene3D G3DSA:3.30.70.270 215 388 1.5E-43 T 28-03-2018 AL504_RS00770 cfc07aed961c19b30de7366d40db92a6 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 378 8.1E-34 T 28-03-2018 IPR000160 GGDEF domain AL504_RS01785 2c6afb1f63437ad6ebed9cdb8851f18f 175 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 163 174 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL504_RS01785 2c6afb1f63437ad6ebed9cdb8851f18f 175 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 174 5.6E-33 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL504_RS01785 2c6afb1f63437ad6ebed9cdb8851f18f 175 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 67 77 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL504_RS01785 2c6afb1f63437ad6ebed9cdb8851f18f 175 SUPERFAMILY SSF49329 35 174 3.53E-45 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL504_RS01785 2c6afb1f63437ad6ebed9cdb8851f18f 175 Gene3D G3DSA:2.60.40.200 19 175 4.3E-35 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 Gene3D G3DSA:3.30.300.30 477 613 3.7E-16 T 28-03-2018 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 SUPERFAMILY SSF56801 354 614 4.19E-118 T 28-03-2018 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 SUPERFAMILY SSF56801 15 304 4.19E-118 T 28-03-2018 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 Gene3D G3DSA:2.30.38.10 406 475 1.0E-15 T 28-03-2018 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 Gene3D G3DSA:3.40.50.980 16 205 3.2E-39 T 28-03-2018 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 Pfam PF00501 AMP-binding enzyme 23 482 3.4E-89 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 Gene3D G3DSA:3.40.50.980 206 405 2.3E-40 T 28-03-2018 AL504_RS31335 ed7a6df31cf2d650ec179faceb175d14 617 ProSitePatterns PS00455 Putative AMP-binding domain signature. 201 212 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 7 197 39.637 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 SUPERFAMILY SSF52096 15 198 8.58E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 Gene3D G3DSA:3.90.226.10 6 198 1.7E-46 T 28-03-2018 AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 1.2E-45 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 1.2E-45 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 1.2E-45 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 1.2E-45 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 1.2E-45 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS24420 7765c6bc87a5ee4317080291ec572faa 201 Pfam PF00574 Clp protease 17 196 1.9E-78 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL504_RS07610 b4b17d0594c064fdc22cb0a512359ee2 312 Gene3D G3DSA:1.25.40.10 36 291 1.4E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS07610 b4b17d0594c064fdc22cb0a512359ee2 312 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 118 1.1E-23 T 28-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AL504_RS07610 b4b17d0594c064fdc22cb0a512359ee2 312 SUPERFAMILY SSF48452 153 260 4.02E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 766 3.1E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 SUPERFAMILY SSF55785 405 539 6.46E-10 T 28-03-2018 IPR000014 PAS domain AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 Gene3D G3DSA:1.10.287.130 544 608 4.3E-8 T 28-03-2018 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 707 2.4E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 711 721 2.4E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 752 765 2.4E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 746 2.4E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 Gene3D G3DSA:3.30.450.20 406 543 1.6E-16 T 28-03-2018 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 Gene3D G3DSA:3.30.565.10 614 775 3.2E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 SUPERFAMILY SSF55874 602 769 3.01E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 SMART SM00388 547 612 6.2E-4 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 SMART SM01080 35 310 1.6E-78 T 28-03-2018 IPR007890 CHASE2 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 Pfam PF05226 CHASE2 domain 23 304 2.0E-53 T 28-03-2018 IPR007890 CHASE2 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 SMART SM00387 656 768 5.0E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 SUPERFAMILY SSF47384 536 611 1.94E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS19655 b135af69b7b56c2155bcf12035df1221 775 PIRSF PIRSF037347 2 771 2.4E-269 T 28-03-2018 IPR017181 Signal transduction histidine kinase, CHASE2 sensor domain-containing, predicted AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 PIRSF PIRSF002191 1 126 1.1E-50 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 Pfam PF01245 Ribosomal protein L19 9 117 2.9E-45 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 2.0E-46 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 SUPERFAMILY SSF50104 2 118 4.81E-43 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 29.697 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 PRINTS PR00061 Ribosomal protein L19 signature 38 67 3.8E-32 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 PRINTS PR00061 Ribosomal protein L19 signature 92 117 3.8E-32 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 PRINTS PR00061 Ribosomal protein L19 signature 8 37 3.8E-32 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11260 b2389ce6c4e6845e31ce2d112a80de69 126 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 267 281 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 122 1.0E-21 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 SUPERFAMILY SSF51735 4 148 3.33E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 4 371 9.3E-182 T 28-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 SMART SM00859 4 123 1.4E-25 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 359 1.3E-53 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 Gene3D G3DSA:3.30.360.10 146 356 1.0E-55 T 28-03-2018 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 373 33.043 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 PIRSF PIRSF000148 3 376 2.7E-59 T 28-03-2018 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 Gene3D G3DSA:3.40.50.720 2 145 3.3E-17 T 28-03-2018 AL504_RS08595 811b05dfc8221d5bbb6609ebfab0f0bb 376 SUPERFAMILY SSF55347 135 360 8.93E-71 T 28-03-2018 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 SUPERFAMILY SSF53098 1 154 6.32E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.3E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 7.3E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.3E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.3E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.3E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 46.552 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 Gene3D G3DSA:3.30.420.10 1 156 2.0E-45 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 153 1.6E-44 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS13735 34c93e238eae2892b9f4f785ac704f38 182 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 7.1E-50 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82693 277 333 9.42E-26 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82693 139 184 9.42E-26 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Gene3D G3DSA:3.30.70.1430 40 142 6.9E-26 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Gene3D G3DSA:1.20.1640.10 278 501 5.6E-53 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Gene3D G3DSA:3.30.70.1320 778 855 1.4E-6 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82693 41 134 4.19E-26 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82693 575 681 3.77E-26 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 6.1E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82866 841 1036 1.57E-46 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Gene3D G3DSA:3.30.70.1430 577 678 3.8E-18 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Gene3D G3DSA:3.30.70.1440 682 777 7.2E-22 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82866 299 499 1.15E-52 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82714 732 818 3.01E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Gene3D G3DSA:1.20.1640.10 856 1043 5.2E-40 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Pfam PF00873 AcrB/AcrD/AcrF family 3 1036 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82693 682 731 3.66E-26 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82693 818 867 3.66E-26 T 28-03-2018 AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 Gene3D G3DSA:3.30.2090.10 183 277 3.8E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 SUPERFAMILY SSF82714 185 274 3.01E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS22005 202c891dea7cc68d6ad1b4e394299860 1071 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1043 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL504_RS20280 777d71304da532cbf370121163b10e1d 353 Gene3D G3DSA:3.90.25.10 236 334 3.4E-30 T 28-03-2018 AL504_RS20280 777d71304da532cbf370121163b10e1d 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.2E-98 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20280 777d71304da532cbf370121163b10e1d 353 SUPERFAMILY SSF51735 1 335 7.15E-91 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20280 777d71304da532cbf370121163b10e1d 353 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS20280 777d71304da532cbf370121163b10e1d 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 337 7.8E-149 T 28-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL504_RS20280 777d71304da532cbf370121163b10e1d 353 Gene3D G3DSA:3.40.50.720 1 235 2.4E-56 T 28-03-2018 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 Pfam PF00361 Proton-conducting membrane transporter 141 425 1.6E-77 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 71 133 3.1E-5 T 28-03-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 175 199 2.7E-48 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 333 352 2.7E-48 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 385 411 2.7E-48 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 2.7E-48 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 245 269 2.7E-48 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12510 b8d7ed624f229c533bb0f1c8aa685524 500 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 14 495 8.0E-185 T 28-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 SUPERFAMILY SSF52821 162 285 4.45E-30 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 Pfam PF00581 Rhodanese-like domain 7 132 3.7E-16 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 Pfam PF00581 Rhodanese-like domain 164 275 1.3E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 Gene3D G3DSA:3.40.250.10 1 151 1.6E-31 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 Gene3D G3DSA:3.40.250.10 161 287 1.5E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 SUPERFAMILY SSF52821 2 146 8.77E-40 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 SMART SM00450 9 135 4.8E-18 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 SMART SM00450 159 279 1.3E-10 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23860 8151767c981b26d14dbc2020fbce2d7c 287 ProSitePatterns PS00683 Rhodanese C-terminal signature. 263 273 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL504_RS02315 a95323dd5fc06ad410c3944ff3d7af3a 232 Gene3D G3DSA:1.20.1050.10 94 221 7.2E-34 T 28-03-2018 AL504_RS02315 a95323dd5fc06ad410c3944ff3d7af3a 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 196 9.7E-10 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS02315 a95323dd5fc06ad410c3944ff3d7af3a 232 SUPERFAMILY SSF47616 78 207 1.13E-39 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS02315 a95323dd5fc06ad410c3944ff3d7af3a 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 3.6E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS02315 a95323dd5fc06ad410c3944ff3d7af3a 232 Gene3D G3DSA:3.40.30.10 1 93 1.6E-28 T 28-03-2018 AL504_RS02315 a95323dd5fc06ad410c3944ff3d7af3a 232 SUPERFAMILY SSF52833 1 84 3.5E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS15975 088c2587798ed91c21e71fceb3e61fbc 177 Gene3D G3DSA:3.10.450.50 18 177 9.4E-31 T 28-03-2018 AL504_RS15975 088c2587798ed91c21e71fceb3e61fbc 177 SUPERFAMILY SSF54427 20 175 2.79E-46 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS15975 088c2587798ed91c21e71fceb3e61fbc 177 Pfam PF00866 Ring hydroxylating beta subunit 33 165 4.5E-32 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AL504_RS25415 6bd9f3e55743e8d5ee3c2509184602ed 555 Pfam PF07690 Major Facilitator Superfamily 40 441 1.3E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS25415 6bd9f3e55743e8d5ee3c2509184602ed 555 Gene3D G3DSA:1.20.1250.20 28 249 4.8E-19 T 28-03-2018 AL504_RS25415 6bd9f3e55743e8d5ee3c2509184602ed 555 SUPERFAMILY SSF103473 26 489 1.23E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS25415 6bd9f3e55743e8d5ee3c2509184602ed 555 Gene3D G3DSA:1.20.1250.20 263 499 3.0E-21 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 32 713 0.0 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 346 352 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 SUPERFAMILY SSF56784 340 602 2.93E-36 T 28-03-2018 IPR023214 HAD-like domain AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 Pfam PF00702 haloacid dehalogenase-like hydrolase 340 567 7.2E-33 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 30 717 40.543 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 Gene3D G3DSA:1.20.1110.10 51 357 1.0E-23 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 187 201 2.1E-25 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 478 489 2.1E-25 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 572 2.1E-25 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 344 358 2.1E-25 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 576 588 2.1E-25 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 510 2.1E-25 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 Pfam PF00122 E1-E2 ATPase 154 322 3.2E-28 T 28-03-2018 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 SUPERFAMILY SSF81665 51 125 5.75E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 SUPERFAMILY SSF81665 241 338 5.75E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 SUPERFAMILY SSF81665 656 696 5.75E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 Gene3D G3DSA:3.40.50.1000 479 601 2.8E-31 T 28-03-2018 IPR023214 HAD-like domain AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 SUPERFAMILY SSF81653 149 240 2.35E-17 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 Gene3D G3DSA:3.40.1110.10 358 478 2.3E-22 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 408 639 1.5E-45 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS13325 db25cc8a90cde47ccaee5196c088c6ba 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 142 365 5.7E-26 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS28695 f9fc2ccce5915aba2f92a9724a3e1afb 296 SUPERFAMILY SSF53850 94 293 2.9E-32 T 28-03-2018 AL504_RS28695 f9fc2ccce5915aba2f92a9724a3e1afb 296 Gene3D G3DSA:3.40.190.10 94 182 5.8E-10 T 28-03-2018 AL504_RS28695 f9fc2ccce5915aba2f92a9724a3e1afb 296 Gene3D G3DSA:3.40.190.10 183 266 1.2E-17 T 28-03-2018 AL504_RS28695 f9fc2ccce5915aba2f92a9724a3e1afb 296 SUPERFAMILY SSF46785 7 115 7.62E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28695 f9fc2ccce5915aba2f92a9724a3e1afb 296 Pfam PF03466 LysR substrate binding domain 93 293 1.6E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS28695 f9fc2ccce5915aba2f92a9724a3e1afb 296 Gene3D G3DSA:1.10.10.10 1 88 6.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28695 f9fc2ccce5915aba2f92a9724a3e1afb 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 SUPERFAMILY SSF51735 14 262 1.33E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 260 2.7E-55 T 28-03-2018 AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 4.0E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 4.0E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.0E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 Gene3D G3DSA:3.40.50.720 2 263 1.9E-64 T 28-03-2018 AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 1.9E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.9E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.9E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 1.9E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.9E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21790 d438059bdd71cf73463891ab4741ac08 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.9E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS17055 7a7684a6b1e4de4685869b38e6b254e0 751 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 94 750 2.4E-121 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS17055 7a7684a6b1e4de4685869b38e6b254e0 751 Gene3D G3DSA:2.40.170.20 200 751 9.1E-85 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS17055 7a7684a6b1e4de4685869b38e6b254e0 751 SUPERFAMILY SSF56935 52 751 1.42E-129 T 28-03-2018 AL504_RS17055 7a7684a6b1e4de4685869b38e6b254e0 751 Pfam PF00593 TonB dependent receptor 292 750 1.4E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS17055 7a7684a6b1e4de4685869b38e6b254e0 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 92 192 1.6E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS17055 7a7684a6b1e4de4685869b38e6b254e0 751 Gene3D G3DSA:2.170.130.10 49 199 1.5E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 Gene3D G3DSA:1.20.5.1040 60 107 0.039 T 28-03-2018 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 Gene3D G3DSA:1.20.5.1040 1 49 0.016 T 28-03-2018 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 371 6.9E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 SUPERFAMILY SSF47384 144 227 5.49E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 350 2.3E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 315 2.3E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 369 2.3E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 SMART SM00387 264 372 1.2E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 SUPERFAMILY SSF55874 224 372 1.7E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 Gene3D G3DSA:3.30.565.10 218 375 1.8E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 SMART SM00388 160 228 3.6E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 Gene3D G3DSA:1.10.287.130 144 217 5.7E-10 T 28-03-2018 AL504_RS27660 ea502e66d23f7ce5cfb5e65f250254e0 396 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 227 4.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 Gene3D G3DSA:2.60.120.260 382 617 7.6E-60 T 28-03-2018 IPR008979 Galactose-binding domain-like AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 SUPERFAMILY SSF49785 382 614 4.25E-55 T 28-03-2018 IPR008979 Galactose-binding domain-like AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 21 304 1.7E-54 T 28-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 Gene3D G3DSA:3.40.50.1820 10 381 2.9E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 SMART SM00939 335 613 1.4E-77 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 17 616 3.8E-107 T 28-03-2018 IPR005674 CocE/Serine esterase GO:0016787 AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 SUPERFAMILY SSF53474 6 385 4.29E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27385 7a14f9a8be45e110fab1d7d44637f976 632 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 348 612 6.3E-47 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 371 382 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 77 248 2.8E-46 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 362 443 2.7E-30 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 Gene3D G3DSA:3.10.560.10 265 313 2.1E-4 T 28-03-2018 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 SUPERFAMILY SSF142019 45 269 1.83E-83 T 28-03-2018 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 SUPERFAMILY SSF140490 355 452 3.79E-38 T 28-03-2018 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 SMART SM00928 358 403 5.0E-25 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 44 444 7.1E-193 T 28-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 SUPERFAMILY SSF142984 270 353 1.7E-26 T 28-03-2018 AL504_RS12545 165b063bec7bec794ae831907c970d04 455 Pfam PF10531 SLBB domain 272 320 9.8E-13 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 Pfam PF00403 Heavy-metal-associated domain 12 72 3.0E-16 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 SUPERFAMILY SSF81653 240 338 1.26E-31 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 171 748 1.5E-188 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 658 2.1E-28 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 288 302 2.1E-28 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 440 454 2.1E-28 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 674 2.1E-28 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 575 2.1E-28 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 596 2.1E-28 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 153 749 2.7E-178 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 SUPERFAMILY SSF55008 5 78 2.23E-23 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 Gene3D G3DSA:3.30.70.100 7 96 1.0E-23 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 639 655 7.0E-6 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 670 695 7.0E-6 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 210 717 1.2E-92 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 442 448 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 Gene3D G3DSA:3.40.50.1000 565 705 3.9E-45 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 Pfam PF00702 haloacid dehalogenase-like hydrolase 437 653 8.1E-46 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 Gene3D G3DSA:1.20.1110.10 203 454 2.0E-49 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 Gene3D G3DSA:3.40.1110.10 455 564 3.1E-32 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 SUPERFAMILY SSF56784 497 746 1.86E-60 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 SUPERFAMILY SSF56784 438 458 1.86E-60 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 SUPERFAMILY SSF81665 194 242 3.4E-14 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 SUPERFAMILY SSF81665 339 434 3.4E-14 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 SUPERFAMILY SSF81665 688 728 3.4E-14 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 Pfam PF00122 E1-E2 ATPase 239 419 6.3E-61 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 205 748 6.5E-120 T 28-03-2018 AL504_RS05140 7edda6e79b04dc289def4b55c4a4797f 757 ProSitePatterns PS01047 Heavy-metal-associated domain. 14 43 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL504_RS29395 7ac62f10fc78bc03de45a4780510aff1 264 SMART SM00382 36 218 3.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29395 7ac62f10fc78bc03de45a4780510aff1 264 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29395 7ac62f10fc78bc03de45a4780510aff1 264 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 28 256 4.5E-88 T 28-03-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AL504_RS29395 7ac62f10fc78bc03de45a4780510aff1 264 Gene3D G3DSA:3.40.50.300 1 231 9.2E-57 T 28-03-2018 AL504_RS29395 7ac62f10fc78bc03de45a4780510aff1 264 Pfam PF00005 ABC transporter 28 168 7.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29395 7ac62f10fc78bc03de45a4780510aff1 264 SUPERFAMILY SSF52540 6 233 5.33E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS06560 464a163a77eeac5fe87ec7b8f532f4d5 531 SUPERFAMILY SSF53335 15 167 2.43E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS06560 464a163a77eeac5fe87ec7b8f532f4d5 531 Pfam PF13649 Methyltransferase domain 52 149 4.8E-15 T 28-03-2018 AL504_RS06560 464a163a77eeac5fe87ec7b8f532f4d5 531 Gene3D G3DSA:3.40.50.150 3 264 9.3E-29 T 28-03-2018 AL504_RS06560 464a163a77eeac5fe87ec7b8f532f4d5 531 Pfam PF10119 Predicted methyltransferase regulatory domain 221 305 2.8E-24 T 28-03-2018 IPR018773 Methyltransferase regulatory domain, predicted AL504_RS06685 f917f8d485c54ac6bf4d295995397749 204 SUPERFAMILY SSF52833 44 201 1.93E-46 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS06685 f917f8d485c54ac6bf4d295995397749 204 Pfam PF02630 SCO1/SenC 44 179 1.7E-37 T 28-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS06685 f917f8d485c54ac6bf4d295995397749 204 Gene3D G3DSA:3.40.30.10 33 200 2.0E-33 T 28-03-2018 AL504_RS03235 3bbb79d8d6aa0944f3860f62d64322d1 319 Gene3D G3DSA:3.40.50.1820 1 319 1.3E-60 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS03235 3bbb79d8d6aa0944f3860f62d64322d1 319 Pfam PF07859 alpha/beta hydrolase fold 83 289 2.1E-72 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AL504_RS03235 3bbb79d8d6aa0944f3860f62d64322d1 319 SUPERFAMILY SSF53474 47 311 4.74E-67 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 SUPERFAMILY SSF55120 100 329 5.76E-64 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 Gene3D G3DSA:3.10.290.10 29 97 2.3E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 37 326 1.8E-76 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 SUPERFAMILY SSF55174 41 91 1.16E-9 T 28-03-2018 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 Pfam PF00849 RNA pseudouridylate synthase 114 271 1.6E-31 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 Pfam PF01479 S4 domain 41 86 1.1E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 Gene3D G3DSA:3.30.2350.10 106 331 9.4E-61 T 28-03-2018 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 157 171 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11610 df468217000ddfd5fbd7b7683e00f0d7 332 SMART SM00363 40 105 9.0E-5 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 Gene3D G3DSA:3.40.190.10 91 181 3.4E-23 T 28-03-2018 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 5.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 Pfam PF03466 LysR substrate binding domain 90 293 2.9E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 SUPERFAMILY SSF46785 8 113 6.27E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 Gene3D G3DSA:3.40.190.10 182 264 1.3E-22 T 28-03-2018 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 SUPERFAMILY SSF53850 91 296 3.34E-44 T 28-03-2018 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24355 8b61fc2cfd34729b06851078c86f8e63 299 Gene3D G3DSA:1.10.10.10 2 85 4.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28515 29600340bca1351a0a68551634f07b22 489 Gene3D G3DSA:3.40.309.10 275 453 1.5E-73 T 28-03-2018 AL504_RS28515 29600340bca1351a0a68551634f07b22 489 Gene3D G3DSA:3.40.605.10 5 274 4.3E-103 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS28515 29600340bca1351a0a68551634f07b22 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS28515 29600340bca1351a0a68551634f07b22 489 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 35 481 6.7E-221 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AL504_RS28515 29600340bca1351a0a68551634f07b22 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS28515 29600340bca1351a0a68551634f07b22 489 SUPERFAMILY SSF53720 12 486 3.8E-172 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS28515 29600340bca1351a0a68551634f07b22 489 Pfam PF00171 Aldehyde dehydrogenase family 24 482 7.8E-172 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS05330 7a418a30caebe10a25c9815d4b2539fd 375 Pfam PF00149 Calcineurin-like phosphoesterase 3 104 2.0E-11 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS05330 7a418a30caebe10a25c9815d4b2539fd 375 Gene3D G3DSA:3.60.21.10 2 250 8.5E-23 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS05330 7a418a30caebe10a25c9815d4b2539fd 375 SUPERFAMILY SSF56300 4 292 1.2E-37 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS05330 7a418a30caebe10a25c9815d4b2539fd 375 PIRSF PIRSF033093 1 371 2.2E-111 T 28-03-2018 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type AL504_RS24120 dc793a19102db33ef6b870f566a11c21 359 PIRSF PIRSF005508 2 356 9.4E-116 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL504_RS24120 dc793a19102db33ef6b870f566a11c21 359 Pfam PF01758 Sodium Bile acid symporter family 63 256 4.0E-34 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AL504_RS24120 dc793a19102db33ef6b870f566a11c21 359 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 2.7E-115 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 Gene3D G3DSA:3.40.190.10 182 271 1.4E-18 T 28-03-2018 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 Gene3D G3DSA:1.10.10.10 9 90 2.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 SUPERFAMILY SSF53850 96 303 4.89E-43 T 28-03-2018 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 Pfam PF03466 LysR substrate binding domain 94 299 1.0E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 Gene3D G3DSA:3.40.190.10 95 181 5.7E-15 T 28-03-2018 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 2.8E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30110 48f9a5c9bdcb71a8ebfb11958e6b8289 306 SUPERFAMILY SSF46785 11 92 3.96E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 Gene3D G3DSA:3.40.50.300 138 337 6.0E-62 T 28-03-2018 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 Pfam PF01434 Peptidase family M41 388 596 1.7E-79 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 603 37.29 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 597 5.3E-239 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 Gene3D G3DSA:1.10.8.60 338 417 2.3E-27 T 28-03-2018 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 SUPERFAMILY SSF52540 150 397 1.07E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 SMART SM00382 190 329 1.5E-25 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 Pfam PF06480 FtsH Extracellular 10 79 4.4E-6 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 SUPERFAMILY SSF140990 408 606 3.92E-75 T 28-03-2018 AL504_RS26455 33d287713dea0c7d1a728aac1396891d 632 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 1.9E-45 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 Pfam PF03466 LysR substrate binding domain 88 282 1.3E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 SUPERFAMILY SSF53850 87 291 6.16E-35 T 28-03-2018 AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 Gene3D G3DSA:3.40.190.10 182 260 1.6E-14 T 28-03-2018 AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 SUPERFAMILY SSF46785 1 109 7.35E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 Gene3D G3DSA:1.10.10.10 1 81 2.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 3.6E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27930 28c4a4e9a08b537f2b724f27ebfe9d7d 303 Gene3D G3DSA:3.40.190.10 89 181 2.5E-16 T 28-03-2018 AL504_RS04930 ce0dc1801c8d44017e1763eae706dc32 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04930 ce0dc1801c8d44017e1763eae706dc32 242 PIRSF PIRSF039085 1 242 8.1E-112 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS04930 ce0dc1801c8d44017e1763eae706dc32 242 Gene3D G3DSA:3.40.50.300 1 242 2.4E-74 T 28-03-2018 AL504_RS04930 ce0dc1801c8d44017e1763eae706dc32 242 SUPERFAMILY SSF52540 3 237 1.5E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04930 ce0dc1801c8d44017e1763eae706dc32 242 Pfam PF00005 ABC transporter 19 167 6.8E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04930 ce0dc1801c8d44017e1763eae706dc32 242 SMART SM00382 28 215 6.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 SUPERFAMILY SSF46785 73 214 1.31E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 SMART SM00347 92 199 9.5E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 Pfam PF01047 MarR family 121 164 1.2E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 ProSitePatterns PS01117 MarR-type HTH domain signature. 138 172 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 PRINTS PR00598 Bacterial regulatory protein MarR family signature 159 175 1.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 139 1.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 PRINTS PR00598 Bacterial regulatory protein MarR family signature 189 209 1.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 PRINTS PR00598 Bacterial regulatory protein MarR family signature 140 155 1.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS00240 9b7b139d1628be0ef228b7f3caa51919 218 Gene3D G3DSA:1.10.10.10 72 218 9.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27615 8d61af811d8662cb74646a1a7e9141c7 793 Gene3D G3DSA:2.40.170.20 257 793 4.0E-86 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS27615 8d61af811d8662cb74646a1a7e9141c7 793 Gene3D G3DSA:2.170.130.10 102 256 3.7E-30 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS27615 8d61af811d8662cb74646a1a7e9141c7 793 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 145 792 2.5E-119 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS27615 8d61af811d8662cb74646a1a7e9141c7 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 144 243 7.8E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS27615 8d61af811d8662cb74646a1a7e9141c7 793 Pfam PF00593 TonB dependent receptor 334 792 3.0E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS27615 8d61af811d8662cb74646a1a7e9141c7 793 SMART SM00965 49 101 7.2E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS27615 8d61af811d8662cb74646a1a7e9141c7 793 SUPERFAMILY SSF56935 103 793 1.83E-138 T 28-03-2018 AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 Gene3D G3DSA:1.10.40.50 254 320 4.4E-21 T 28-03-2018 AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 SUPERFAMILY SSF52540 96 312 2.98E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 Gene3D G3DSA:3.40.50.300 90 252 1.1E-19 T 28-03-2018 AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 Pfam PF03193 RsgA GTPase 79 252 1.2E-45 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 25 317 34.152 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 SUPERFAMILY SSF50249 26 83 2.17E-8 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 Gene3D G3DSA:2.40.50.140 21 81 2.4E-15 T 28-03-2018 AL504_RS11250 9ecee81b7bcf53cb8b0f3a82a8b2644f 320 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 60 310 5.4E-58 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 267 340 3.8E-33 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 37 340 3.5E-145 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 SUPERFAMILY SSF46785 271 344 5.44E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 Gene3D G3DSA:1.10.10.10 271 341 1.3E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 Gene3D G3DSA:1.10.8.60 198 268 5.8E-30 T 28-03-2018 AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 264 342 6.0E-39 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 357 180.949 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 SMART SM00382 65 193 2.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 SUPERFAMILY SSF52540 34 264 3.05E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 Gene3D G3DSA:3.40.50.300 32 195 5.3E-29 T 28-03-2018 AL504_RS13755 34d19909b2b25484140f4bc5ea2b3117 357 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 23 249 2.3E-117 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AL504_RS26115 b525c5e29f7034710ccebd9f324bf10f 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 282 1.4E-35 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS26115 b525c5e29f7034710ccebd9f324bf10f 293 Gene3D G3DSA:1.10.3470.10 3 284 1.1E-42 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS10145 efc56cf25fb68065f58970d2bc6ef1c3 265 SUPERFAMILY SSF74653 184 261 3.79E-20 T 28-03-2018 AL504_RS10145 efc56cf25fb68065f58970d2bc6ef1c3 265 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 187 262 2.2E-21 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS10145 efc56cf25fb68065f58970d2bc6ef1c3 265 Gene3D G3DSA:3.30.1150.10 64 265 2.1E-19 T 28-03-2018 AL504_RS10145 efc56cf25fb68065f58970d2bc6ef1c3 265 PRINTS PR01374 Gram-negative bacterial tonB protein signature 120 130 1.3E-8 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL504_RS10145 efc56cf25fb68065f58970d2bc6ef1c3 265 PRINTS PR01374 Gram-negative bacterial tonB protein signature 181 202 1.3E-8 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL504_RS10145 efc56cf25fb68065f58970d2bc6ef1c3 265 PRINTS PR01374 Gram-negative bacterial tonB protein signature 202 220 1.3E-8 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL504_RS10145 efc56cf25fb68065f58970d2bc6ef1c3 265 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 187 263 1.5E-22 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82866 290 491 1.57E-46 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82866 797 1016 1.28E-44 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82693 556 653 9.94E-14 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 Gene3D G3DSA:3.30.70.1430 40 143 9.3E-25 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.9E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82714 708 792 1.7E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 Gene3D G3DSA:3.30.70.1430 558 657 7.7E-9 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82714 183 266 8.37E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82693 138 182 2.96E-23 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82693 268 324 2.96E-23 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 SUPERFAMILY SSF82693 40 134 3.92E-23 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 Gene3D G3DSA:1.20.1640.10 281 503 2.1E-47 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 Gene3D G3DSA:1.20.1640.10 806 1027 4.9E-34 T 28-03-2018 AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 Gene3D G3DSA:3.30.2090.10 181 269 1.1E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 Gene3D G3DSA:3.30.2090.10 708 795 4.0E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16140 b7c818f7b6a0ec88af97584ebcff4529 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12015 2ef2b3f922500599847004f436886f16 107 PIRSF PIRSF020408 5 107 4.3E-42 T 28-03-2018 IPR016772 Uncharacterised conserved protein UCP020408 AL504_RS12015 2ef2b3f922500599847004f436886f16 107 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 6 97 9.0E-18 T 28-03-2018 IPR016772 Uncharacterised conserved protein UCP020408 AL504_RS22570 4cc9aac6f1936a0154a92ecdc73320a4 198 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 148 1.3E-19 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS22570 4cc9aac6f1936a0154a92ecdc73320a4 198 SUPERFAMILY SSF54593 14 151 1.19E-34 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS22570 4cc9aac6f1936a0154a92ecdc73320a4 198 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 128 147 - T 28-03-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AL504_RS22570 4cc9aac6f1936a0154a92ecdc73320a4 198 Gene3D G3DSA:3.10.180.10 11 181 3.4E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 Pfam PF12833 Helix-turn-helix domain 231 309 2.8E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 Pfam PF01965 DJ-1/PfpI family 1 170 1.2E-23 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 Gene3D G3DSA:1.10.10.60 265 323 1.1E-9 T 28-03-2018 AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 SUPERFAMILY SSF46689 208 255 4.03E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 Gene3D G3DSA:1.10.10.60 205 264 7.0E-12 T 28-03-2018 AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 Gene3D G3DSA:3.40.50.880 1 204 1.8E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 SUPERFAMILY SSF52317 1 191 4.9E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 SUPERFAMILY SSF46689 261 311 4.48E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS30075 7bf52a8183a3c67865233033d58491f5 329 SMART SM00342 225 308 3.2E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS27080 21b3112492c7d91f0dc265f30ba3f1ba 227 SUPERFAMILY SSF161098 3 214 4.58E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27080 21b3112492c7d91f0dc265f30ba3f1ba 227 Gene3D G3DSA:1.10.3720.10 1 216 4.9E-38 T 28-03-2018 AL504_RS27080 21b3112492c7d91f0dc265f30ba3f1ba 227 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 212 1.2E-70 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AL504_RS27080 21b3112492c7d91f0dc265f30ba3f1ba 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 210 4.1E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01590 caf972890487b932e033e3b7d3e70b27 428 Gene3D G3DSA:3.90.1150.10 290 428 5.1E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS01590 caf972890487b932e033e3b7d3e70b27 428 SUPERFAMILY SSF53383 70 425 2.5E-88 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS01590 caf972890487b932e033e3b7d3e70b27 428 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 22 424 1.4E-99 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS01590 caf972890487b932e033e3b7d3e70b27 428 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 233 247 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS01590 caf972890487b932e033e3b7d3e70b27 428 Gene3D G3DSA:3.40.640.10 15 289 5.1E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS01590 caf972890487b932e033e3b7d3e70b27 428 PIRSF PIRSF001434 4 428 5.6E-126 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 SUPERFAMILY SSF55031 216 332 9.94E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 PIRSF PIRSF001235 8 419 5.1E-135 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 Gene3D G3DSA:3.40.630.10 7 250 1.3E-35 T 28-03-2018 AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 414 1.5E-110 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 Gene3D G3DSA:3.40.630.10 251 419 3.6E-22 T 28-03-2018 AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 Pfam PF01546 Peptidase family M20/M25/M40 81 412 2.4E-28 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 SUPERFAMILY SSF53187 5 226 5.19E-85 T 28-03-2018 AL504_RS22685 ee22d7b5b9a381d9a497aa5ea12bb46b 420 SUPERFAMILY SSF53187 342 415 5.19E-85 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 SUPERFAMILY SSF52021 1 131 3.27E-54 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 251 262 2.0E-10 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 223 232 2.0E-10 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 336 349 2.0E-10 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 251 267 4.7E-39 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 220 234 4.7E-39 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 293 304 4.7E-39 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 268 285 4.7E-39 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 181 195 4.7E-39 T 28-03-2018 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 Gene3D G3DSA:3.40.50.880 142 365 4.1E-63 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 365 45.839 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 Gene3D G3DSA:3.50.30.20 1 140 3.7E-58 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 Pfam PF00117 Glutamine amidotransferase class-I 184 359 6.2E-44 T 28-03-2018 IPR017926 Glutamine amidotransferase AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 1 124 4.4E-50 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 1 361 6.7E-141 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 SUPERFAMILY SSF52317 146 363 2.6E-60 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26380 b780ebb93c8735c7ad466f10d6e06579 365 SMART SM01097 1 125 9.0E-85 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 Pfam PF00654 Voltage gated chloride channel 81 416 5.9E-72 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 Gene3D G3DSA:3.10.580.10 441 588 8.7E-17 T 28-03-2018 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 SUPERFAMILY SSF81340 16 438 5.89E-91 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 SUPERFAMILY SSF54631 448 577 1.59E-16 T 28-03-2018 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 Gene3D G3DSA:1.10.3080.10 11 440 5.9E-77 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 PRINTS PR00762 Chloride channel signature 175 194 2.0E-24 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 PRINTS PR00762 Chloride channel signature 367 383 2.0E-24 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 PRINTS PR00762 Chloride channel signature 124 143 2.0E-24 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 PRINTS PR00762 Chloride channel signature 338 358 2.0E-24 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 PRINTS PR00762 Chloride channel signature 385 404 2.0E-24 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 Pfam PF00571 CBS domain 530 571 0.0037 T 28-03-2018 IPR000644 CBS domain AL504_RS03095 978a6254a547a8c10d21c8dcf5b707e9 593 Pfam PF00571 CBS domain 450 499 2.9E-4 T 28-03-2018 IPR000644 CBS domain AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 SUPERFAMILY SSF52016 424 616 1.02E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 613 6.5E-252 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 Gene3D G3DSA:3.40.50.2300 53 189 2.3E-4 T 28-03-2018 AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 Pfam PF00920 Dehydratase family 34 610 5.7E-217 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 613 44.679 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 512 523 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS21910 a0f728c404ced389e8dd8c4680b46e44 621 SUPERFAMILY SSF143975 3 423 4.32E-131 T 28-03-2018 AL504_RS02520 ee86a9bbb17bd5b9e678c9c549ed9dee 183 PIRSF PIRSF005900 14 180 5.1E-49 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS02520 ee86a9bbb17bd5b9e678c9c549ed9dee 183 Gene3D G3DSA:1.20.1260.10 6 182 4.4E-39 T 28-03-2018 IPR012347 Ferritin-related AL504_RS02520 ee86a9bbb17bd5b9e678c9c549ed9dee 183 SUPERFAMILY SSF47240 19 173 2.88E-44 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS02520 ee86a9bbb17bd5b9e678c9c549ed9dee 183 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 57 73 1.2E-7 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS02520 ee86a9bbb17bd5b9e678c9c549ed9dee 183 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 153 171 1.2E-7 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS02520 ee86a9bbb17bd5b9e678c9c549ed9dee 183 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 81 97 1.2E-7 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS02520 ee86a9bbb17bd5b9e678c9c549ed9dee 183 Pfam PF00210 Ferritin-like domain 38 171 1.9E-25 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL504_RS28760 b61bfeff671ddc8abb97e855a6c4ae52 234 Gene3D G3DSA:3.40.50.300 1 233 6.2E-58 T 28-03-2018 AL504_RS28760 b61bfeff671ddc8abb97e855a6c4ae52 234 SMART SM00382 26 213 1.2E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28760 b61bfeff671ddc8abb97e855a6c4ae52 234 Pfam PF00005 ABC transporter 17 162 9.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28760 b61bfeff671ddc8abb97e855a6c4ae52 234 SUPERFAMILY SSF52540 2 232 4.57E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28760 b61bfeff671ddc8abb97e855a6c4ae52 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS20050 95573234b968cdee12fb79321152918d 625 SUPERFAMILY SSF74863 38 157 2.75E-32 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL504_RS20050 95573234b968cdee12fb79321152918d 625 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 12 623 34.337 T 28-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AL504_RS20050 95573234b968cdee12fb79321152918d 625 Pfam PF11412 Disulphide bond corrector protein DsbC 40 156 7.3E-32 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL504_RS20050 95573234b968cdee12fb79321152918d 625 Pfam PF13899 Thioredoxin-like 522 596 7.7E-10 T 28-03-2018 AL504_RS20050 95573234b968cdee12fb79321152918d 625 SUPERFAMILY SSF52833 512 620 5.06E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS20050 95573234b968cdee12fb79321152918d 625 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 212 412 1.8E-17 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL504_RS20050 95573234b968cdee12fb79321152918d 625 Gene3D G3DSA:2.60.40.1250 35 161 3.4E-37 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL504_RS20050 95573234b968cdee12fb79321152918d 625 Gene3D G3DSA:3.40.30.10 537 625 1.4E-11 T 28-03-2018 AL504_RS20050 95573234b968cdee12fb79321152918d 625 ProSitePatterns PS00194 Thioredoxin family active site. 531 549 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS20050 95573234b968cdee12fb79321152918d 625 Gene3D G3DSA:3.40.30.10 496 536 0.012 T 28-03-2018 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 SUPERFAMILY SSF54373 412 492 9.42E-7 T 28-03-2018 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 Gene3D G3DSA:3.50.50.60 2 586 7.2E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 Pfam PF01494 FAD binding domain 8 53 3.4E-5 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 SUPERFAMILY SSF51905 520 581 3.71E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 SUPERFAMILY SSF51905 8 341 3.71E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.3E-5 T 28-03-2018 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 2.3E-5 T 28-03-2018 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 Pfam PF00732 GMC oxidoreductase 234 347 5.3E-13 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS04225 98a2af76cc4293fb39891c2f94ec9761 590 Pfam PF05199 GMC oxidoreductase 448 570 2.0E-21 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Pfam PF09334 tRNA synthetases class I (M) 6 406 2.8E-136 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Gene3D G3DSA:1.10.730.10 383 552 1.8E-29 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 SUPERFAMILY SSF52374 173 394 1.96E-89 T 28-03-2018 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 SUPERFAMILY SSF52374 4 138 1.96E-89 T 28-03-2018 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 SUPERFAMILY SSF57770 139 173 2.49E-12 T 28-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 1.7E-22 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 300 315 1.7E-22 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 1.7E-22 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 1.7E-22 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 394 405 1.7E-22 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 272 1.7E-22 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 550 1.6E-146 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 SUPERFAMILY SSF50249 581 687 1.86E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Gene3D G3DSA:3.40.50.620 2 140 2.0E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Gene3D G3DSA:2.170.220.10 178 259 6.7E-11 T 28-03-2018 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 561 37.365 T 28-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Gene3D G3DSA:2.20.28.20 141 172 4.5E-15 T 28-03-2018 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Pfam PF01588 Putative tRNA binding domain 588 668 5.2E-21 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 SUPERFAMILY SSF47323 396 596 7.85E-30 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Gene3D G3DSA:2.40.50.140 574 688 8.3E-28 T 28-03-2018 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 572 688 6.8E-38 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL504_RS22930 04f89744a023ac1af89614956bcd5eaf 688 Gene3D G3DSA:3.40.50.620 260 382 4.3E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 SUPERFAMILY SSF50692 621 772 1.22E-38 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 Gene3D G3DSA:2.40.40.20 616 768 2.9E-27 T 28-03-2018 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 Gene3D G3DSA:3.40.228.10 555 615 5.5E-5 T 28-03-2018 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 Gene3D G3DSA:3.40.228.10 151 408 6.3E-52 T 28-03-2018 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 Pfam PF01568 Molydopterin dinucleotide binding domain 631 747 7.1E-23 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 Gene3D G3DSA:3.90.55.10 13 97 2.8E-11 T 28-03-2018 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 Gene3D G3DSA:3.90.55.10 482 554 2.7E-24 T 28-03-2018 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 SUPERFAMILY SSF53706 33 631 7.59E-148 T 28-03-2018 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 Pfam PF00384 Molybdopterin oxidoreductase 61 518 5.3E-57 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS23855 ff0115644c85e17b5c244ab7b4ca0222 781 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 669 696 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL504_RS25845 9efeb03c972d8bfe637058248511dd6a 216 Pfam PF01323 DSBA-like thioredoxin domain 13 188 2.8E-8 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL504_RS25845 9efeb03c972d8bfe637058248511dd6a 216 Gene3D G3DSA:3.40.30.10 7 203 2.5E-28 T 28-03-2018 AL504_RS25845 9efeb03c972d8bfe637058248511dd6a 216 SUPERFAMILY SSF52833 8 192 8.63E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 SUPERFAMILY SSF46689 136 186 4.39E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Gene3D G3DSA:3.30.310.20 199 301 3.8E-36 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 SMART SM00342 100 183 2.8E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Gene3D G3DSA:1.10.10.60 84 140 1.0E-7 T 28-03-2018 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 SMART SM01009 199 315 1.2E-53 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Gene3D G3DSA:3.40.10.10 1 73 1.4E-23 T 28-03-2018 IPR035451 Ada-like domain AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Pfam PF12833 Helix-turn-helix domain 106 184 1.4E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 SUPERFAMILY SSF55945 200 296 5.49E-27 T 28-03-2018 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 322 471 6.7E-8 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Pfam PF06029 AlkA N-terminal domain 200 315 5.4E-37 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Gene3D G3DSA:1.10.10.60 141 192 1.6E-11 T 28-03-2018 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Pfam PF02805 Metal binding domain of Ada 7 71 2.6E-28 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 SUPERFAMILY SSF48150 305 480 1.52E-38 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 SUPERFAMILY SSF57884 2 76 2.88E-30 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Gene3D G3DSA:1.10.340.30 302 447 5.4E-27 T 28-03-2018 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 SMART SM00478 325 482 5.9E-19 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS25200 8b4153aef13aff27f9a030f6bb00b6a0 482 Gene3D G3DSA:1.10.1670.10 448 482 7.5E-15 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL504_RS25315 8e656fa25c7472e9179298d4591ff711 379 SUPERFAMILY SSF54506 4 166 2.35E-64 T 28-03-2018 AL504_RS25315 8e656fa25c7472e9179298d4591ff711 379 Gene3D G3DSA:3.10.310.10 176 339 5.1E-53 T 28-03-2018 AL504_RS25315 8e656fa25c7472e9179298d4591ff711 379 SUPERFAMILY SSF54506 171 358 1.76E-55 T 28-03-2018 AL504_RS25315 8e656fa25c7472e9179298d4591ff711 379 Gene3D G3DSA:3.10.310.10 1 175 1.0E-73 T 28-03-2018 AL504_RS25315 8e656fa25c7472e9179298d4591ff711 379 Pfam PF04303 PrpF protein 5 356 1.2E-122 T 28-03-2018 IPR007400 PrpF protein AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 2 562 2.2E-197 T 28-03-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 Gene3D G3DSA:3.30.70.1450 219 292 1.8E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 Pfam PF02080 TrkA-C domain 226 278 5.2E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 396 546 3.7E-25 T 28-03-2018 IPR006512 YidE/YbjL duplication AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 SUPERFAMILY SSF116726 224 279 2.62E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 Gene3D G3DSA:3.30.70.1450 293 383 1.1E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 Pfam PF06826 Predicted Permease Membrane Region 392 560 1.4E-40 T 28-03-2018 IPR006512 YidE/YbjL duplication AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 Pfam PF06826 Predicted Permease Membrane Region 15 175 1.0E-37 T 28-03-2018 IPR006512 YidE/YbjL duplication AL504_RS11335 260d73d0cd76e0ec0160d5af6092fdeb 563 SUPERFAMILY SSF116726 291 377 8.24E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS05940 fef4cefc16fd5b494f04312aa3257793 344 Gene3D G3DSA:3.40.50.150 97 341 4.5E-30 T 28-03-2018 AL504_RS05940 fef4cefc16fd5b494f04312aa3257793 344 SUPERFAMILY SSF53335 153 329 6.6E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS05940 fef4cefc16fd5b494f04312aa3257793 344 Gene3D G3DSA:1.10.10.10 5 96 1.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05940 fef4cefc16fd5b494f04312aa3257793 344 Pfam PF00891 O-methyltransferase 173 322 1.2E-14 T 28-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 AL504_RS05940 fef4cefc16fd5b494f04312aa3257793 344 SUPERFAMILY SSF46785 8 87 2.99E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05940 fef4cefc16fd5b494f04312aa3257793 344 Pfam PF16864 Dimerisation domain 22 92 4.8E-8 T 28-03-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 54 2.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 SUPERFAMILY SSF53850 80 286 7.03E-44 T 28-03-2018 AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 SUPERFAMILY SSF46785 1 75 3.74E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 Gene3D G3DSA:1.10.10.10 1 78 2.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 Pfam PF03466 LysR substrate binding domain 85 288 3.5E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 Gene3D G3DSA:3.40.190.10 84 174 1.2E-12 T 28-03-2018 AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 5.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 5.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 5.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03120 da47b30ddf61e3586991d39acde5d2eb 302 Gene3D G3DSA:3.40.190.10 175 260 5.0E-14 T 28-03-2018 AL504_RS28795 c25fe9e1e77f1556e90779866b006f45 355 SUPERFAMILY SSF56796 2 353 4.19E-70 T 28-03-2018 AL504_RS28795 c25fe9e1e77f1556e90779866b006f45 355 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 344 7.3E-50 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL504_RS28795 c25fe9e1e77f1556e90779866b006f45 355 Gene3D G3DSA:3.40.50.1970 1 161 5.8E-25 T 28-03-2018 AL504_RS28795 c25fe9e1e77f1556e90779866b006f45 355 Gene3D G3DSA:1.20.1090.10 162 355 9.7E-27 T 28-03-2018 AL504_RS28795 c25fe9e1e77f1556e90779866b006f45 355 PIRSF PIRSF000112 1 350 4.9E-65 T 28-03-2018 AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 SUPERFAMILY SSF52922 585 720 2.36E-26 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 Gene3D G3DSA:3.40.50.970 19 351 7.8E-69 T 28-03-2018 AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 Pfam PF02779 Transketolase, pyrimidine binding domain 402 573 4.4E-36 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 Pfam PF02780 Transketolase, C-terminal domain 591 712 2.1E-22 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 Pfam PF00676 Dehydrogenase E1 component 124 343 1.5E-51 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 Gene3D G3DSA:3.40.50.970 396 591 2.4E-51 T 28-03-2018 AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 SUPERFAMILY SSF52518 28 366 3.04E-73 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 SMART SM00861 399 575 4.0E-43 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 SUPERFAMILY SSF52518 400 600 2.48E-53 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS21935 27c17695e82a8d0b9673b1c922b638cc 727 Gene3D G3DSA:3.40.50.920 592 721 3.9E-23 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS09090 6d8a0bc8b085849323c4e2231c8acc7f 385 SUPERFAMILY SSF55681 4 319 9.0E-52 T 28-03-2018 AL504_RS09090 6d8a0bc8b085849323c4e2231c8acc7f 385 PIRSF PIRSF001549 5 343 3.9E-31 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AL504_RS09090 6d8a0bc8b085849323c4e2231c8acc7f 385 Gene3D G3DSA:3.30.930.10 16 308 5.7E-40 T 28-03-2018 AL504_RS09090 6d8a0bc8b085849323c4e2231c8acc7f 385 Pfam PF13393 Histidyl-tRNA synthetase 10 316 9.6E-110 T 28-03-2018 AL504_RS09090 6d8a0bc8b085849323c4e2231c8acc7f 385 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 367 33.688 T 28-03-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 AL504_RS06675 7576c7d98126bfb3177aa463d5c45cb6 688 SUPERFAMILY SSF55486 4 684 1.17E-174 T 28-03-2018 AL504_RS06675 7576c7d98126bfb3177aa463d5c45cb6 688 Pfam PF01432 Peptidase family M3 224 684 4.4E-127 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL504_RS06675 7576c7d98126bfb3177aa463d5c45cb6 688 Gene3D G3DSA:1.20.1050.40 7 140 8.2E-35 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AL504_RS06675 7576c7d98126bfb3177aa463d5c45cb6 688 Gene3D G3DSA:1.10.1370.10 142 436 4.9E-50 T 28-03-2018 AL504_RS06675 7576c7d98126bfb3177aa463d5c45cb6 688 Gene3D G3DSA:1.10.1370.10 454 688 1.5E-58 T 28-03-2018 AL504_RS03540 a9bdf17d9f00c7b39e92be4e3e7910d5 401 Pfam PF00266 Aminotransferase class-V 44 379 5.4E-46 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS03540 a9bdf17d9f00c7b39e92be4e3e7910d5 401 Gene3D G3DSA:3.90.1150.10 302 401 1.0E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS03540 a9bdf17d9f00c7b39e92be4e3e7910d5 401 SUPERFAMILY SSF53383 28 399 7.75E-77 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03540 a9bdf17d9f00c7b39e92be4e3e7910d5 401 Gene3D G3DSA:3.40.640.10 55 301 3.1E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS03540 a9bdf17d9f00c7b39e92be4e3e7910d5 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 226 246 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL504_RS23155 69cba71dcb8894a8a577f768d80dbe7f 209 Gene3D G3DSA:3.30.470.20 129 177 0.036 T 28-03-2018 AL504_RS23155 69cba71dcb8894a8a577f768d80dbe7f 209 Gene3D G3DSA:3.30.470.20 30 128 4.3E-6 T 28-03-2018 AL504_RS00790 47db177fe8db8d738d0789143defa20c 161 Pfam PF08281 Sigma-70, region 4 105 153 2.5E-12 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00790 47db177fe8db8d738d0789143defa20c 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 153 1.6E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00790 47db177fe8db8d738d0789143defa20c 161 SUPERFAMILY SSF88659 99 157 1.4E-10 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00790 47db177fe8db8d738d0789143defa20c 161 Pfam PF04542 Sigma-70 region 2 9 74 7.2E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00790 47db177fe8db8d738d0789143defa20c 161 SUPERFAMILY SSF88946 6 94 3.57E-11 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00790 47db177fe8db8d738d0789143defa20c 161 Gene3D G3DSA:1.10.1740.10 3 71 1.8E-12 T 28-03-2018 AL504_RS00790 47db177fe8db8d738d0789143defa20c 161 Gene3D G3DSA:1.10.10.10 72 155 3.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26245 ca6e7eb34d6a16caa6a8e0a16f3fa107 316 Gene3D G3DSA:3.20.20.70 1 306 4.6E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS26245 ca6e7eb34d6a16caa6a8e0a16f3fa107 316 Pfam PF00682 HMGL-like 6 284 2.8E-34 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL504_RS26245 ca6e7eb34d6a16caa6a8e0a16f3fa107 316 SUPERFAMILY SSF51569 4 303 5.68E-57 T 28-03-2018 AL504_RS02920 6412905e4f67cd71363fe8373715dbfd 132 Gene3D G3DSA:3.30.1330.40 1 131 4.2E-32 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS02920 6412905e4f67cd71363fe8373715dbfd 132 Pfam PF01042 Endoribonuclease L-PSP 13 127 3.4E-27 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS02920 6412905e4f67cd71363fe8373715dbfd 132 SUPERFAMILY SSF55298 8 129 1.57E-36 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 Gene3D G3DSA:3.30.950.10 139 257 3.7E-34 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 PIRSF PIRSF005917 18 309 2.1E-94 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 30 254 32.942 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 108 119 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 30 233 6.2E-30 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 Gene3D G3DSA:3.40.1010.10 28 138 1.0E-36 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 SUPERFAMILY SSF53790 30 251 4.58E-73 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS21070 4ce12cfea5dcebb4e2cc12828c10177f 309 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 31 305 1.6E-70 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 SMART SM00418 16 94 2.6E-21 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 Gene3D G3DSA:3.40.250.10 100 225 1.5E-27 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 Gene3D G3DSA:1.10.10.10 2 99 8.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 SMART SM00450 120 216 1.3E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 Pfam PF00581 Rhodanese-like domain 122 212 2.4E-13 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 SUPERFAMILY SSF46785 5 93 1.67E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 ProSitePatterns PS00380 Rhodanese signature 1. 145 156 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 SUPERFAMILY SSF52821 114 222 2.62E-30 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 Pfam PF12840 Helix-turn-helix domain 15 74 1.0E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 5.5E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 5.5E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24590 a21a1f2e3df29872e5b9ff2df1cd6a8d 225 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 5.5E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 4 172 1.4E-36 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 Pfam PF01386 Ribosomal L25p family 4 91 2.0E-23 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 SUPERFAMILY SSF50715 1 191 9.59E-50 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 185 29.203 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 Gene3D G3DSA:2.40.240.10 1 94 2.7E-28 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 174 2.5E-22 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 94 4.0E-37 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 94 23.021 T 28-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL504_RS23285 ae8747d7042fca72d6d4067703af0860 204 Gene3D G3DSA:2.170.120.20 98 192 6.9E-22 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain AL504_RS01775 03cde667016b0d6c94a55f94909eadb7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.0E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01775 03cde667016b0d6c94a55f94909eadb7 289 Gene3D G3DSA:3.40.190.10 94 177 3.5E-11 T 28-03-2018 AL504_RS01775 03cde667016b0d6c94a55f94909eadb7 289 Gene3D G3DSA:3.40.190.10 178 251 6.0E-12 T 28-03-2018 AL504_RS01775 03cde667016b0d6c94a55f94909eadb7 289 Gene3D G3DSA:1.10.10.10 4 87 9.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01775 03cde667016b0d6c94a55f94909eadb7 289 Pfam PF03466 LysR substrate binding domain 94 284 5.9E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01775 03cde667016b0d6c94a55f94909eadb7 289 SUPERFAMILY SSF53850 95 286 4.34E-23 T 28-03-2018 AL504_RS01775 03cde667016b0d6c94a55f94909eadb7 289 SUPERFAMILY SSF46785 7 112 5.12E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14450 1c7ca7337a0513ae49805f5f192e8d65 108 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 94 7.1E-30 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL504_RS14450 1c7ca7337a0513ae49805f5f192e8d65 108 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 1 96 23.145 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL504_RS14450 1c7ca7337a0513ae49805f5f192e8d65 108 SUPERFAMILY SSF55248 16 96 1.57E-31 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL504_RS14450 1c7ca7337a0513ae49805f5f192e8d65 108 Gene3D G3DSA:3.30.1360.20 13 100 1.2E-35 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 SUPERFAMILY SSF46785 1 80 1.19E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 SUPERFAMILY SSF53850 90 292 1.41E-33 T 28-03-2018 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 Gene3D G3DSA:3.40.190.10 92 179 2.0E-21 T 28-03-2018 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 Gene3D G3DSA:3.40.190.10 180 261 2.1E-14 T 28-03-2018 AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 Gene3D G3DSA:1.10.10.10 1 91 6.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01375 7c5d667f392092afd148ef057bee13f5 296 Pfam PF03466 LysR substrate binding domain 89 289 1.7E-32 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21705 6f6b5609acfecf1f0c73dc9a0a3d0bd9 181 PIRSF PIRSF030820 17 181 2.3E-47 T 28-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 AL504_RS21705 6f6b5609acfecf1f0c73dc9a0a3d0bd9 181 Pfam PF06073 Bacterial protein of unknown function (DUF934) 70 178 5.2E-34 T 28-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 231 454 1.4E-72 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 SUPERFAMILY SSF51735 11 294 6.3E-94 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 Gene3D G3DSA:3.40.50.720 9 295 3.0E-108 T 28-03-2018 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 Gene3D G3DSA:1.10.1040.10 297 516 2.8E-62 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 36 201 4.3E-30 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 PRINTS PR00084 Mannitol dehydrogenase signature 193 206 3.5E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 PRINTS PR00084 Mannitol dehydrogenase signature 232 245 3.5E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 PRINTS PR00084 Mannitol dehydrogenase signature 37 47 3.5E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 PRINTS PR00084 Mannitol dehydrogenase signature 262 277 3.5E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL504_RS16365 d51048b7aaa14af7449f6748320f6057 520 SUPERFAMILY SSF48179 299 511 6.01E-55 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 1.5E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 Pfam PF00072 Response regulator receiver domain 5 117 1.5E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 Gene3D G3DSA:1.10.10.10 128 222 1.3E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 7.6E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 7.6E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 7.6E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 SUPERFAMILY SSF52172 1 132 9.82E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 Gene3D G3DSA:3.40.50.2300 2 127 2.9E-35 T 28-03-2018 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 SMART SM00421 155 212 1.0E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 SUPERFAMILY SSF46894 150 218 1.12E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02725 d6421433d8a35ba5811c323c7c117408 223 SMART SM00448 3 116 1.9E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 SUPERFAMILY SSF52518 10 323 2.27E-118 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 Gene3D G3DSA:3.40.50.970 4 366 3.1E-120 T 28-03-2018 AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 Pfam PF02780 Transketolase, C-terminal domain 557 670 5.1E-18 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 11 338 4.1E-161 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 Gene3D G3DSA:3.40.50.920 555 677 1.8E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 SUPERFAMILY SSF52518 341 543 1.18E-62 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 Pfam PF02779 Transketolase, pyrimidine binding domain 358 541 2.9E-44 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 SMART SM00861 359 542 3.7E-66 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 Gene3D G3DSA:3.40.50.970 367 554 5.9E-41 T 28-03-2018 AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 SUPERFAMILY SSF52922 551 678 3.27E-44 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS25765 fcb014424b2f0d8e3d63d1f09355d993 678 TIGRFAM TIGR00232 tktlase_bact: transketolase 12 677 2.5E-284 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL504_RS27580 4350f825971a1f7cb6febe222df501e8 103 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 40 97 4.2E-8 T 28-03-2018 IPR009387 Toxin HigB-2 AL504_RS27580 4350f825971a1f7cb6febe222df501e8 103 PIRSF PIRSF039032 1 103 6.0E-36 T 28-03-2018 IPR009387 Toxin HigB-2 AL504_RS00860 b9255f4b83720a6bcf6e16d94a5ae6b1 381 PIRSF PIRSF000138 1 381 6.4E-133 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AL504_RS00860 b9255f4b83720a6bcf6e16d94a5ae6b1 381 Gene3D G3DSA:3.20.20.70 5 381 1.5E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS00860 b9255f4b83720a6bcf6e16d94a5ae6b1 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 276 282 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AL504_RS00860 b9255f4b83720a6bcf6e16d94a5ae6b1 381 Pfam PF01070 FMN-dependent dehydrogenase 16 379 6.6E-128 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AL504_RS00860 b9255f4b83720a6bcf6e16d94a5ae6b1 381 SUPERFAMILY SSF51395 5 379 6.11E-97 T 28-03-2018 AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 Pfam PF07729 FCD domain 82 205 1.5E-26 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 SUPERFAMILY SSF46785 1 76 7.21E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 Gene3D G3DSA:1.10.10.10 3 74 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 6.8E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 Gene3D G3DSA:1.20.120.530 75 222 1.2E-32 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 SUPERFAMILY SSF48008 78 213 5.75E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 SMART SM00895 82 206 2.1E-19 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS26990 0fa783f8d246f6ce4e64217f3e313518 249 SMART SM00345 14 72 2.0E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS29305 1e629c3bf0008d4b9ab496b0e109db3c 121 Gene3D G3DSA:2.60.120.10 17 121 9.7E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS29305 1e629c3bf0008d4b9ab496b0e109db3c 121 Pfam PF05899 Protein of unknown function (DUF861) 42 115 9.1E-16 T 28-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AL504_RS29305 1e629c3bf0008d4b9ab496b0e109db3c 121 SUPERFAMILY SSF51182 19 118 3.71E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS20005 a09def9db816f8581901a480ad8951b8 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.8E-27 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AL504_RS20005 a09def9db816f8581901a480ad8951b8 72 SUPERFAMILY SSF50249 1 70 6.0E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS20005 a09def9db816f8581901a480ad8951b8 72 Gene3D G3DSA:2.40.50.140 1 72 7.4E-35 T 28-03-2018 AL504_RS20005 a09def9db816f8581901a480ad8951b8 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 8.8E-37 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL504_RS20005 a09def9db816f8581901a480ad8951b8 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.082 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL504_RS19565 29cbb4fc6ed19d4558fbe9f639bfa599 461 SUPERFAMILY SSF55931 120 459 4.41E-104 T 28-03-2018 AL504_RS19565 29cbb4fc6ed19d4558fbe9f639bfa599 461 SMART SM01230 120 376 4.6E-92 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS19565 29cbb4fc6ed19d4558fbe9f639bfa599 461 Pfam PF00120 Glutamine synthetase, catalytic domain 121 457 2.6E-96 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS19565 29cbb4fc6ed19d4558fbe9f639bfa599 461 Gene3D G3DSA:3.10.20.70 15 117 2.4E-13 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL504_RS19565 29cbb4fc6ed19d4558fbe9f639bfa599 461 Gene3D G3DSA:3.30.590.10 118 461 1.4E-101 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL504_RS31325 9aa2cdaf0e8818eb6c97894b39d9763b 393 Gene3D G3DSA:3.40.50.2300 19 156 8.7E-16 T 28-03-2018 AL504_RS31325 9aa2cdaf0e8818eb6c97894b39d9763b 393 Pfam PF13458 Periplasmic binding protein 37 358 3.2E-62 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS31325 9aa2cdaf0e8818eb6c97894b39d9763b 393 SUPERFAMILY SSF53822 36 386 2.89E-62 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS31325 9aa2cdaf0e8818eb6c97894b39d9763b 393 Gene3D G3DSA:3.40.50.2300 157 332 3.7E-23 T 28-03-2018 AL504_RS22330 c0faeaabbcb31a332261c22395ee7bc1 436 SUPERFAMILY SSF103473 12 429 1.44E-81 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS22330 c0faeaabbcb31a332261c22395ee7bc1 436 Gene3D G3DSA:1.20.1250.20 12 211 4.9E-38 T 28-03-2018 AL504_RS22330 c0faeaabbcb31a332261c22395ee7bc1 436 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 28 428 4.8E-126 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AL504_RS22330 c0faeaabbcb31a332261c22395ee7bc1 436 PIRSF PIRSF002808 2 436 2.0E-38 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL504_RS22330 c0faeaabbcb31a332261c22395ee7bc1 436 Gene3D G3DSA:1.20.1250.20 221 432 1.3E-21 T 28-03-2018 AL504_RS22330 c0faeaabbcb31a332261c22395ee7bc1 436 Pfam PF07690 Major Facilitator Superfamily 26 391 1.3E-56 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 8.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 Pfam PF00106 short chain dehydrogenase 7 199 8.1E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 Gene3D G3DSA:3.40.50.720 1 259 1.9E-63 T 28-03-2018 AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.6E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.6E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.6E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 SUPERFAMILY SSF51735 5 260 2.61E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20780 be360b14d61b17d89eebb49a5814c13b 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 261 6.0E-103 T 28-03-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 Gene3D G3DSA:3.40.50.300 565 750 1.3E-6 T 28-03-2018 AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 SMART SM00491 605 742 1.8E-11 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 SUPERFAMILY SSF52540 520 534 3.23E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 SUPERFAMILY SSF52540 319 393 3.23E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 SUPERFAMILY SSF52540 195 255 3.23E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 SUPERFAMILY SSF52540 563 738 3.23E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 SMART SM00488 174 421 0.0027 T 28-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 Pfam PF13307 Helicase C-terminal domain 593 754 9.9E-32 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 Pfam PF06733 DEAD_2 269 388 1.9E-11 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AL504_RS01500 05e72f126fdc872483bc27d189bb293c 756 Gene3D G3DSA:3.40.50.300 156 557 4.1E-18 T 28-03-2018 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Gene3D G3DSA:3.40.50.620 41 131 3.0E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Gene3D G3DSA:1.10.730.10 617 842 2.2E-53 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 SUPERFAMILY SSF50677 200 410 5.13E-50 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 661 1.2E-189 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 SUPERFAMILY SSF52374 1 198 3.52E-132 T 28-03-2018 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 SUPERFAMILY SSF52374 410 670 3.52E-132 T 28-03-2018 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Pfam PF06827 Zinc finger found in FPG and IleRS 914 941 5.4E-6 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Gene3D G3DSA:3.90.740.10 185 396 4.0E-55 T 28-03-2018 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Gene3D G3DSA:3.30.2320.20 843 917 2.8E-22 T 28-03-2018 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Gene3D G3DSA:3.40.50.620 397 616 1.1E-52 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Pfam PF08264 Anticodon-binding domain of tRNA 706 867 2.7E-24 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 944 20.621 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 869 6.4E-261 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 SUPERFAMILY SSF47323 673 943 9.53E-70 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 408 423 9.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 539 552 9.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 9.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 233 256 9.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL504_RS30675 d31865a973277e7aca53d9fb31d44c12 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 582 591 9.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL504_RS20370 d282e2856c4734ee0b46f96df51aadf9 349 SUPERFAMILY SSF54631 7 110 6.57E-19 T 28-03-2018 AL504_RS20370 d282e2856c4734ee0b46f96df51aadf9 349 Pfam PF00571 CBS domain 9 50 5.0E-6 T 28-03-2018 IPR000644 CBS domain AL504_RS20370 d282e2856c4734ee0b46f96df51aadf9 349 SUPERFAMILY SSF53448 121 344 1.59E-61 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20370 d282e2856c4734ee0b46f96df51aadf9 349 Gene3D G3DSA:3.10.580.10 1 113 1.3E-16 T 28-03-2018 AL504_RS20370 d282e2856c4734ee0b46f96df51aadf9 349 Pfam PF00483 Nucleotidyl transferase 123 344 3.7E-33 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL504_RS20370 d282e2856c4734ee0b46f96df51aadf9 349 Gene3D G3DSA:3.90.550.10 116 347 7.6E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS15880 efe89f674d61f2c320954ecd598d81e8 241 Gene3D G3DSA:3.40.50.300 1 241 2.2E-75 T 28-03-2018 AL504_RS15880 efe89f674d61f2c320954ecd598d81e8 241 SUPERFAMILY SSF52540 1 235 2.66E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15880 efe89f674d61f2c320954ecd598d81e8 241 Pfam PF00005 ABC transporter 17 165 2.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS15880 efe89f674d61f2c320954ecd598d81e8 241 SMART SM00382 26 213 1.2E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15880 efe89f674d61f2c320954ecd598d81e8 241 PIRSF PIRSF039085 1 241 1.8E-106 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS15880 efe89f674d61f2c320954ecd598d81e8 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS25255 803274bfba76003b194027e9188b4209 279 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 36 279 4.7E-115 T 28-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AL504_RS25255 803274bfba76003b194027e9188b4209 279 SUPERFAMILY SSF52540 36 277 2.17E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25255 803274bfba76003b194027e9188b4209 279 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 257 278 5.3E-9 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS25255 803274bfba76003b194027e9188b4209 279 Pfam PF00005 ABC transporter 52 207 7.2E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS25255 803274bfba76003b194027e9188b4209 279 Gene3D G3DSA:3.40.50.300 26 278 5.1E-49 T 28-03-2018 AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 Gene3D G3DSA:3.40.50.980 216 370 1.2E-37 T 28-03-2018 AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 Gene3D G3DSA:3.30.300.30 454 559 1.7E-26 T 28-03-2018 AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 Pfam PF00501 AMP-binding enzyme 31 460 1.0E-106 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 SUPERFAMILY SSF56801 22 556 1.44E-149 T 28-03-2018 AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 4.9E-20 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 Gene3D G3DSA:2.30.38.10 371 453 7.5E-27 T 28-03-2018 AL504_RS28345 8c6866e4bd2a281484f6aa3409c28dd8 563 Gene3D G3DSA:3.40.50.980 20 215 5.8E-43 T 28-03-2018 AL504_RS22340 c5ad75572edae2105fed78af1fb898df 217 Pfam PF01081 KDPG and KHG aldolase 10 189 1.6E-29 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL504_RS22340 c5ad75572edae2105fed78af1fb898df 217 Gene3D G3DSA:3.20.20.70 4 211 6.1E-38 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS22340 c5ad75572edae2105fed78af1fb898df 217 SUPERFAMILY SSF51569 4 207 4.03E-58 T 28-03-2018 AL504_RS26265 7f3a0ad7652104c45c9bff0bf5840ee3 323 Gene3D G3DSA:3.40.190.10 153 297 1.3E-12 T 28-03-2018 AL504_RS26265 7f3a0ad7652104c45c9bff0bf5840ee3 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 319 3.0E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS26265 7f3a0ad7652104c45c9bff0bf5840ee3 323 PIRSF PIRSF017082 1 323 3.2E-89 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS26265 7f3a0ad7652104c45c9bff0bf5840ee3 323 SUPERFAMILY SSF53850 104 286 4.94E-19 T 28-03-2018 AL504_RS09145 16cd3d9638f14761a3331202cd17bf39 166 Pfam PF13413 Helix-turn-helix domain 26 85 5.4E-20 T 28-03-2018 AL504_RS09145 16cd3d9638f14761a3331202cd17bf39 166 SUPERFAMILY SSF47413 22 64 1.01E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS09145 16cd3d9638f14761a3331202cd17bf39 166 Gene3D G3DSA:1.10.260.40 20 97 7.3E-9 T 28-03-2018 AL504_RS02650 56a3fafd74d1724f1adf88512adac300 315 Gene3D G3DSA:3.40.190.10 92 181 1.5E-10 T 28-03-2018 AL504_RS02650 56a3fafd74d1724f1adf88512adac300 315 Gene3D G3DSA:3.40.190.10 182 265 8.0E-20 T 28-03-2018 AL504_RS02650 56a3fafd74d1724f1adf88512adac300 315 SUPERFAMILY SSF53850 91 301 1.07E-35 T 28-03-2018 AL504_RS02650 56a3fafd74d1724f1adf88512adac300 315 Gene3D G3DSA:1.10.10.10 1 87 6.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02650 56a3fafd74d1724f1adf88512adac300 315 Pfam PF03466 LysR substrate binding domain 90 297 3.5E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS02650 56a3fafd74d1724f1adf88512adac300 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02650 56a3fafd74d1724f1adf88512adac300 315 SUPERFAMILY SSF46785 5 91 1.82E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03100 96f9f7d2c1417399c14a185e78b798bc 298 Pfam PF03466 LysR substrate binding domain 90 289 3.7E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03100 96f9f7d2c1417399c14a185e78b798bc 298 SUPERFAMILY SSF46785 4 113 2.12E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03100 96f9f7d2c1417399c14a185e78b798bc 298 Gene3D G3DSA:3.40.190.10 178 267 3.5E-18 T 28-03-2018 AL504_RS03100 96f9f7d2c1417399c14a185e78b798bc 298 Gene3D G3DSA:1.10.10.10 1 86 2.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03100 96f9f7d2c1417399c14a185e78b798bc 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 7.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03100 96f9f7d2c1417399c14a185e78b798bc 298 Gene3D G3DSA:3.40.190.10 91 177 8.8E-20 T 28-03-2018 AL504_RS03100 96f9f7d2c1417399c14a185e78b798bc 298 SUPERFAMILY SSF53850 90 292 5.43E-37 T 28-03-2018 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 Pfam PF00501 AMP-binding enzyme 14 105 2.1E-14 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 Pfam PF00501 AMP-binding enzyme 120 374 4.1E-56 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 Gene3D G3DSA:2.30.38.10 286 368 7.3E-13 T 28-03-2018 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 Gene3D G3DSA:3.40.50.980 11 105 9.7E-20 T 28-03-2018 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 SUPERFAMILY SSF56801 14 479 1.19E-113 T 28-03-2018 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 Gene3D G3DSA:3.30.300.30 369 482 9.2E-24 T 28-03-2018 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 Gene3D G3DSA:3.40.50.980 106 133 1.8E-6 T 28-03-2018 AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 ProSitePatterns PS00455 Putative AMP-binding domain signature. 128 139 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS15740 a73bfa10e3655f7a7ac81047250565ac 482 Gene3D G3DSA:3.40.50.980 134 285 2.0E-36 T 28-03-2018 AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 Gene3D G3DSA:1.10.10.60 270 316 9.6E-11 T 28-03-2018 AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 Gene3D G3DSA:1.10.10.60 230 269 1.0E-7 T 28-03-2018 AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 SUPERFAMILY SSF52317 1 195 1.18E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 SMART SM00342 230 313 4.0E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 309 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 Pfam PF12833 Helix-turn-helix domain 236 314 7.8E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 SUPERFAMILY SSF46689 215 263 5.02E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 Pfam PF01965 DJ-1/PfpI family 2 174 1.4E-21 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 Gene3D G3DSA:3.40.50.880 1 229 3.1E-61 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS16300 b664da020ed74d814b75e653e2864a21 318 SUPERFAMILY SSF46689 266 316 7.62E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 PIRSF PIRSF037495 1 465 1.4E-164 T 28-03-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 2.0E-11 T 28-03-2018 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.0E-11 T 28-03-2018 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 2.0E-11 T 28-03-2018 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 Pfam PF04324 BFD-like [2Fe-2S] binding domain 377 428 1.3E-11 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 SUPERFAMILY SSF51905 2 326 1.24E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 315 1.7E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 Gene3D G3DSA:3.50.50.60 1 178 8.1E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 Gene3D G3DSA:3.50.50.60 179 346 2.2E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.2E-8 T 28-03-2018 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 5.2E-8 T 28-03-2018 AL504_RS07130 c28f8049a7c7bfff68027c4d68fb15f4 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 5.2E-8 T 28-03-2018 AL504_RS19415 7ee95a3ca2e0fff67abe5e01e098182a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 303 7.3E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19415 7ee95a3ca2e0fff67abe5e01e098182a 306 SUPERFAMILY SSF161098 98 288 6.93E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19415 7ee95a3ca2e0fff67abe5e01e098182a 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 63 1.1E-10 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS19415 7ee95a3ca2e0fff67abe5e01e098182a 306 Gene3D G3DSA:1.10.3720.10 28 306 1.5E-42 T 28-03-2018 AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 SUPERFAMILY SSF46689 216 266 3.23E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 SUPERFAMILY SSF52317 1 197 1.26E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 Gene3D G3DSA:1.10.10.60 266 318 3.1E-7 T 28-03-2018 AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 Pfam PF12833 Helix-turn-helix domain 238 315 8.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 Pfam PF01965 DJ-1/PfpI family 68 176 2.5E-9 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 SMART SM00342 232 315 1.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 Gene3D G3DSA:1.10.10.60 214 265 7.5E-12 T 28-03-2018 AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 Gene3D G3DSA:3.40.50.880 2 213 6.9E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS15545 e7d9e667e41a5347043876278f8e12d3 319 SUPERFAMILY SSF46689 268 316 5.38E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS21950 edd8ee894f8be26bf2045088084a41d4 250 Pfam PF00005 ABC transporter 22 177 2.2E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21950 edd8ee894f8be26bf2045088084a41d4 250 Gene3D G3DSA:3.40.50.300 2 249 1.6E-52 T 28-03-2018 AL504_RS21950 edd8ee894f8be26bf2045088084a41d4 250 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 8.5E-10 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS21950 edd8ee894f8be26bf2045088084a41d4 250 SUPERFAMILY SSF52540 5 246 9.63E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21950 edd8ee894f8be26bf2045088084a41d4 250 SMART SM00382 30 224 6.0E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 Gene3D G3DSA:3.30.70.1430 41 141 4.4E-25 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82866 817 1004 9.02E-43 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.8E-262 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 Gene3D G3DSA:3.30.2090.10 698 784 1.3E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82693 267 320 2.93E-17 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82693 137 181 2.93E-17 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82693 43 130 1.03E-23 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82714 183 264 5.75E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82714 699 786 4.45E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 Gene3D G3DSA:1.20.1640.10 785 1006 3.7E-42 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82693 650 698 5.23E-23 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82693 785 833 5.23E-23 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 Gene3D G3DSA:1.20.1640.10 285 502 2.8E-42 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82866 299 489 4.71E-47 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 SUPERFAMILY SSF82693 553 650 4.13E-16 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 Gene3D G3DSA:3.30.70.1430 555 647 3.0E-6 T 28-03-2018 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 Gene3D G3DSA:3.30.2090.10 180 268 1.0E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12655 5a3cd26fea994eda4e616c3528dc1b34 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 3.1E-70 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 43 384 1.5E-24 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 49 295 8.1E-68 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 SUPERFAMILY SSF51419 39 298 1.89E-79 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 Gene3D G3DSA:2.40.37.10 281 428 4.7E-45 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 SUPERFAMILY SSF50621 273 427 1.76E-51 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 20 426 3.5E-152 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 Gene3D G3DSA:3.20.20.10 47 280 3.3E-63 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 177 186 2.7E-30 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 88 105 2.7E-30 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 314 332 2.7E-30 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 394 416 2.7E-30 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 28 427 41.517 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 238 254 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 90 102 1.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 384 397 1.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 286 305 1.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 70 88 1.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS20085 e43ce0abfdc340563e7c17cc7f7141e9 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 203 216 1.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS21430 f9a7619cefa970a25f2cf00ec47a30ae 142 Pfam PF01381 Helix-turn-helix 1 54 1.6E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS21430 f9a7619cefa970a25f2cf00ec47a30ae 142 SUPERFAMILY SSF47413 1 56 2.39E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS21430 f9a7619cefa970a25f2cf00ec47a30ae 142 Gene3D G3DSA:1.10.260.40 1 72 1.6E-13 T 28-03-2018 AL504_RS21430 f9a7619cefa970a25f2cf00ec47a30ae 142 SMART SM00530 1 54 3.1E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS03585 3ddf1b505b4dbd813f73c5f8dd217a87 382 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 5 377 2.9E-119 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL504_RS03585 3ddf1b505b4dbd813f73c5f8dd217a87 382 SUPERFAMILY SSF53383 18 376 4.68E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03585 3ddf1b505b4dbd813f73c5f8dd217a87 382 Gene3D G3DSA:3.90.1150.10 248 379 1.7E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS03585 3ddf1b505b4dbd813f73c5f8dd217a87 382 Gene3D G3DSA:3.40.640.10 1 247 1.5E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS03585 3ddf1b505b4dbd813f73c5f8dd217a87 382 PIRSF PIRSF001434 1 379 9.2E-113 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03585 3ddf1b505b4dbd813f73c5f8dd217a87 382 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03585 3ddf1b505b4dbd813f73c5f8dd217a87 382 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 375 7.8E-97 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS00165 37ce6debd11fa321183067674e897497 272 Gene3D G3DSA:3.20.20.140 1 265 6.6E-66 T 28-03-2018 AL504_RS00165 37ce6debd11fa321183067674e897497 272 Pfam PF01026 TatD related DNase 3 260 5.6E-60 T 28-03-2018 IPR001130 TatD family GO:0016788 AL504_RS00165 37ce6debd11fa321183067674e897497 272 SUPERFAMILY SSF51556 2 260 7.16E-70 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS00165 37ce6debd11fa321183067674e897497 272 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL504_RS00165 37ce6debd11fa321183067674e897497 272 PIRSF PIRSF005902 1 262 1.6E-59 T 28-03-2018 IPR001130 TatD family GO:0016788 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 9.0E-36 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 SUPERFAMILY SSF51905 2 363 2.81E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PIRSF PIRSF000350 2 443 1.9E-83 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 8.3E-69 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 Gene3D G3DSA:3.30.9.10 95 163 0.4 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 447 6.1E-183 T 28-03-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 Gene3D G3DSA:3.40.50.720 164 324 1.8E-38 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 Gene3D G3DSA:3.40.50.720 6 51 0.004 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 Gene3D G3DSA:3.30.390.30 325 452 3.2E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 5.5E-28 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.5E-28 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 5.5E-28 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 5.5E-28 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.5E-28 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 Gene3D G3DSA:1.10.287.990 52 94 7.6E-23 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 1.0E-67 T 28-03-2018 AL504_RS07795 c127d97a99d1eb40cc8ac33eb22ab84a 452 SUPERFAMILY SSF55424 335 448 1.62E-36 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS30605 f9eebf9ba3ad90b0da00fbea395137f4 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 217 4.6E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS30605 f9eebf9ba3ad90b0da00fbea395137f4 223 TIGRFAM TIGR03003 ectoine_ehuD: ectoine/hydroxyectoine ABC transporter, permease protein EhuD 5 216 3.5E-92 T 28-03-2018 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD AL504_RS30605 f9eebf9ba3ad90b0da00fbea395137f4 223 SUPERFAMILY SSF161098 16 217 1.22E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS30605 f9eebf9ba3ad90b0da00fbea395137f4 223 Gene3D G3DSA:1.10.3720.10 2 221 1.8E-40 T 28-03-2018 AL504_RS30605 f9eebf9ba3ad90b0da00fbea395137f4 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 6.0E-26 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS12900 d85b61ee306eb747d98da0bfea36b70f 168 SUPERFAMILY SSF88946 11 100 4.32E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12900 d85b61ee306eb747d98da0bfea36b70f 168 Pfam PF04542 Sigma-70 region 2 15 80 3.6E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12900 d85b61ee306eb747d98da0bfea36b70f 168 Gene3D G3DSA:1.10.1740.10 2 64 5.0E-13 T 28-03-2018 AL504_RS12900 d85b61ee306eb747d98da0bfea36b70f 168 SUPERFAMILY SSF88659 105 165 8.07E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12900 d85b61ee306eb747d98da0bfea36b70f 168 Gene3D G3DSA:1.10.10.10 65 166 1.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12900 d85b61ee306eb747d98da0bfea36b70f 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 165 4.9E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12900 d85b61ee306eb747d98da0bfea36b70f 168 Pfam PF08281 Sigma-70, region 4 111 163 4.3E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS07020 401407d79e8bf5c837c19057b00ef19a 127 SUPERFAMILY SSF54637 11 126 5.32E-21 T 28-03-2018 IPR029069 HotDog domain AL504_RS07020 401407d79e8bf5c837c19057b00ef19a 127 Gene3D G3DSA:3.10.129.10 4 126 2.1E-12 T 28-03-2018 AL504_RS07020 401407d79e8bf5c837c19057b00ef19a 127 Pfam PF03061 Thioesterase superfamily 42 108 1.0E-5 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS25975 990074a4b6dd384c8b6848d345eb2111 258 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 4 256 2.9E-112 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AL504_RS25975 990074a4b6dd384c8b6848d345eb2111 258 Gene3D G3DSA:3.40.50.300 3 258 5.7E-60 T 28-03-2018 AL504_RS25975 990074a4b6dd384c8b6848d345eb2111 258 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS25975 990074a4b6dd384c8b6848d345eb2111 258 Pfam PF00005 ABC transporter 23 180 2.0E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS25975 990074a4b6dd384c8b6848d345eb2111 258 SUPERFAMILY SSF52540 4 254 2.71E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25975 990074a4b6dd384c8b6848d345eb2111 258 SMART SM00382 31 229 1.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS25975 990074a4b6dd384c8b6848d345eb2111 258 PIRSF PIRSF037116 1 258 8.7E-135 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 Gene3D G3DSA:1.10.10.10 2 81 2.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 Pfam PF03466 LysR substrate binding domain 91 287 1.2E-27 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 Gene3D G3DSA:3.40.190.10 179 274 4.9E-7 T 28-03-2018 AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 SUPERFAMILY SSF53850 92 289 8.89E-30 T 28-03-2018 AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.6E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 SUPERFAMILY SSF46785 6 113 2.89E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07340 c7afc4309e9538b216d8ea0f3b7f0fc0 290 Gene3D G3DSA:3.40.190.10 82 178 4.3E-16 T 28-03-2018 AL504_RS18595 2fa6298b6d62da0cf38218f4763e9191 142 SUPERFAMILY SSF69635 8 140 2.41E-9 T 28-03-2018 AL504_RS18595 2fa6298b6d62da0cf38218f4763e9191 142 Gene3D G3DSA:3.30.1460.10 1 130 9.2E-21 T 28-03-2018 AL504_RS18595 2fa6298b6d62da0cf38218f4763e9191 142 Pfam PF05932 Tir chaperone protein (CesT) family 60 127 3.6E-8 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 464 572 2.0E-24 T 28-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 180 195 6.3E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 298 313 6.3E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 262 272 6.3E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 317 329 6.3E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 Pfam PF01433 Peptidase family M1 domain 212 445 7.2E-55 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 Gene3D G3DSA:1.10.390.10 284 463 9.0E-48 T 28-03-2018 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 SUPERFAMILY SSF55486 208 470 5.57E-72 T 28-03-2018 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 575 898 3.2E-116 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 Gene3D G3DSA:2.60.40.1730 17 197 2.0E-26 T 28-03-2018 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 Gene3D G3DSA:1.25.50.10 573 898 1.3E-122 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 SUPERFAMILY SSF63737 9 196 3.14E-39 T 28-03-2018 AL504_RS10555 dc579c5a1475f9c70fe5b674e98e319f 901 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 897 0.0 T 28-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 SUPERFAMILY SSF46785 5 87 1.19E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 Gene3D G3DSA:3.40.190.10 182 273 4.5E-23 T 28-03-2018 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 7.5E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 Gene3D G3DSA:3.40.190.10 91 181 1.3E-21 T 28-03-2018 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 Gene3D G3DSA:1.10.10.10 1 89 3.4E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 SUPERFAMILY SSF53850 91 302 5.12E-36 T 28-03-2018 AL504_RS25390 8cf2b77457c0f2838234bed79cea2551 306 Pfam PF03466 LysR substrate binding domain 91 300 1.2E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Pfam PF00668 Condensation domain 711 1126 1.1E-88 T 28-03-2018 IPR001242 Condensation domain AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 SUPERFAMILY SSF52777 888 1128 1.78E-55 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Gene3D G3DSA:3.30.300.30 475 600 2.3E-13 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Gene3D G3DSA:2.30.38.10 394 470 4.6E-23 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Gene3D G3DSA:3.40.50.980 35 201 8.1E-33 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 1202 1484 2.4E-48 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 SUPERFAMILY SSF51197 1176 1485 4.3E-79 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 SUPERFAMILY SSF52777 709 900 1.22E-44 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Pfam PF00550 Phosphopantetheine attachment site 619 681 1.3E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 SUPERFAMILY SSF56801 34 590 3.01E-112 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Gene3D G3DSA:3.30.559.10 702 906 3.4E-41 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 SUPERFAMILY SSF47336 610 681 3.53E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 ProSitePatterns PS00012 Phosphopantetheine attachment site. 640 655 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 SMART SM00823 Phosphopantetheine attachment site 616 685 8.8E-4 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Gene3D G3DSA:3.40.50.980 202 373 2.1E-37 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Gene3D G3DSA:3.60.130.10 1173 1487 5.5E-70 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Gene3D G3DSA:1.10.1200.10 603 694 2.9E-19 T 28-03-2018 AL504_RS03210 32157cbefb2faa19135cf81440761962 1501 Pfam PF00501 AMP-binding enzyme 45 481 8.6E-89 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS08335 d895ff380d2e3049938a0e8fb904bf57 143 SUPERFAMILY SSF46955 17 120 1.42E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS08335 d895ff380d2e3049938a0e8fb904bf57 143 Gene3D G3DSA:1.10.1660.10 11 125 1.4E-27 T 28-03-2018 AL504_RS08335 d895ff380d2e3049938a0e8fb904bf57 143 SMART SM00422 19 89 6.0E-9 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS08335 d895ff380d2e3049938a0e8fb904bf57 143 Pfam PF13411 MerR HTH family regulatory protein 19 85 6.8E-22 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS30465 c1912acb5c115a13a9adfffb708f2bbc 439 Pfam PF04403 Paraquat-inducible protein A 48 199 3.2E-39 T 28-03-2018 IPR007498 Paraquat-inducible protein A AL504_RS30465 c1912acb5c115a13a9adfffb708f2bbc 439 Pfam PF04403 Paraquat-inducible protein A 258 412 2.1E-50 T 28-03-2018 IPR007498 Paraquat-inducible protein A AL504_RS30465 c1912acb5c115a13a9adfffb708f2bbc 439 Gene3D G3DSA:1.20.1070.10 32 405 0.0031 T 28-03-2018 AL504_RS30465 c1912acb5c115a13a9adfffb708f2bbc 439 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 412 7.8E-80 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 418 4.4E-123 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 Gene3D G3DSA:1.10.645.10 2 232 1.0E-62 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 418 49.872 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 Gene3D G3DSA:1.10.645.10 233 410 4.9E-47 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 SUPERFAMILY SSF56762 194 418 8.63E-138 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 SUPERFAMILY SSF56762 16 167 8.63E-138 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12555 3e9a07f9ca082d6b3312d7119f152d5c 418 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 418 1.5E-184 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS24835 390c96add026a80d9d2d759549d4948d 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 189 1.3E-19 T 28-03-2018 IPR023214 HAD-like domain AL504_RS24835 390c96add026a80d9d2d759549d4948d 229 SUPERFAMILY SSF56784 5 223 9.55E-52 T 28-03-2018 IPR023214 HAD-like domain AL504_RS24835 390c96add026a80d9d2d759549d4948d 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 98 190 1.5E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS24835 390c96add026a80d9d2d759549d4948d 229 Gene3D G3DSA:3.40.50.1000 78 229 5.6E-28 T 28-03-2018 IPR023214 HAD-like domain AL504_RS24835 390c96add026a80d9d2d759549d4948d 229 Gene3D G3DSA:1.10.150.240 21 77 5.2E-20 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL504_RS30655 02fdb6ae2360f652175914b6b3994021 229 Gene3D G3DSA:3.40.50.1860 123 229 0.014 T 28-03-2018 AL504_RS30655 02fdb6ae2360f652175914b6b3994021 229 Pfam PF07302 AroM protein 9 228 9.9E-62 T 28-03-2018 IPR010843 Uncharacterised protein family AroM AL504_RS30655 02fdb6ae2360f652175914b6b3994021 229 Gene3D G3DSA:3.40.50.1860 35 117 0.36 T 28-03-2018 AL504_RS30655 02fdb6ae2360f652175914b6b3994021 229 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 8 227 9.0E-20 T 28-03-2018 IPR010843 Uncharacterised protein family AroM AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 Pfam PF02772 S-adenosylmethionine synthetase, central domain 119 235 4.9E-45 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 4.1E-40 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 SUPERFAMILY SSF55973 5 112 2.04E-45 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 237 375 1.2E-67 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 263 271 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 387 56.539 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 PIRSF PIRSF000497 1 387 3.2E-170 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 120 130 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 SUPERFAMILY SSF55973 114 236 4.71E-52 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 Gene3D G3DSA:3.30.300.10 250 387 1.6E-48 T 28-03-2018 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 385 1.0E-181 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 Gene3D G3DSA:3.30.300.10 13 137 7.2E-44 T 28-03-2018 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 Gene3D G3DSA:3.30.300.10 138 237 4.4E-43 T 28-03-2018 AL504_RS20615 7211afa7011b7a0985c1804fe20ef470 387 SUPERFAMILY SSF55973 237 385 3.81E-67 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL504_RS08485 76f29a067658f673526f6878c168085d 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 532 1.7E-5 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS08485 76f29a067658f673526f6878c168085d 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 277 3.2E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS08485 76f29a067658f673526f6878c168085d 544 Gene3D G3DSA:3.40.50.300 276 544 1.4E-76 T 28-03-2018 AL504_RS08485 76f29a067658f673526f6878c168085d 544 Gene3D G3DSA:3.40.50.300 4 275 4.2E-69 T 28-03-2018 AL504_RS08485 76f29a067658f673526f6878c168085d 544 SUPERFAMILY SSF52540 278 526 4.84E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS08485 76f29a067658f673526f6878c168085d 544 Pfam PF00005 ABC transporter 28 185 1.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS08485 76f29a067658f673526f6878c168085d 544 Pfam PF00005 ABC transporter 305 453 7.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS08485 76f29a067658f673526f6878c168085d 544 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS08485 76f29a067658f673526f6878c168085d 544 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS08485 76f29a067658f673526f6878c168085d 544 SUPERFAMILY SSF52540 7 257 5.44E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS08485 76f29a067658f673526f6878c168085d 544 SMART SM00382 36 235 2.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS08485 76f29a067658f673526f6878c168085d 544 SMART SM00382 313 512 2.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 Gene3D G3DSA:3.40.1060.10 233 367 1.1E-37 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 ProSitePatterns PS00450 Aconitase family signature 1. 404 420 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 Pfam PF00694 Aconitase C-terminal domain 665 792 8.6E-33 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 Gene3D G3DSA:3.30.499.10 368 553 8.8E-48 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 Gene3D G3DSA:3.20.19.10 630 865 1.0E-62 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 Gene3D G3DSA:3.30.499.10 45 232 2.5E-58 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 Pfam PF00330 Aconitase family (aconitate hydratase) 73 539 1.2E-149 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 ProSitePatterns PS01244 Aconitase family signature 2. 470 483 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 SUPERFAMILY SSF52016 607 863 1.45E-61 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 SUPERFAMILY SSF53732 12 588 4.32E-177 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 210 225 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 470 483 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 286 299 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 196 209 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 408 419 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 143 156 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 365 379 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 272 285 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS24820 ff803f674f34c73dabe59770432b8d29 879 PRINTS PR00415 Aconitase family signature 167 175 6.1E-34 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS11770 b374de0c49ae13aaa42d264b9a4df20a 138 PIRSF PIRSF000178 20 135 2.8E-23 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11770 b374de0c49ae13aaa42d264b9a4df20a 138 Gene3D G3DSA:1.20.1300.10 28 137 6.8E-21 T 28-03-2018 AL504_RS11770 b374de0c49ae13aaa42d264b9a4df20a 138 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 21 130 2.3E-25 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11770 b374de0c49ae13aaa42d264b9a4df20a 138 SUPERFAMILY SSF81343 7 134 1.53E-24 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11770 b374de0c49ae13aaa42d264b9a4df20a 138 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 23 132 1.4E-32 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 Gene3D G3DSA:3.50.50.60 266 449 0.048 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 Pfam PF04324 BFD-like [2Fe-2S] binding domain 372 424 7.7E-11 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 PIRSF PIRSF037495 2 457 1.5E-142 T 28-03-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.6E-6 T 28-03-2018 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 3.6E-6 T 28-03-2018 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 3.6E-6 T 28-03-2018 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 3.2E-11 T 28-03-2018 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 3.2E-11 T 28-03-2018 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.2E-11 T 28-03-2018 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 309 1.8E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 SUPERFAMILY SSF51905 7 325 3.63E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 Gene3D G3DSA:3.50.50.60 6 109 4.5E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19215 f93a89e39f3392f514e86f5088cc82e9 461 Gene3D G3DSA:3.50.50.60 110 253 2.6E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS08020 bdb661c40e384a32180e15c10cfc4797 775 Gene3D G3DSA:1.20.1640.10 193 403 4.6E-18 T 28-03-2018 AL504_RS08020 bdb661c40e384a32180e15c10cfc4797 775 Gene3D G3DSA:1.20.1640.10 608 769 7.3E-17 T 28-03-2018 AL504_RS08020 bdb661c40e384a32180e15c10cfc4797 775 SUPERFAMILY SSF82866 616 767 1.44E-17 T 28-03-2018 AL504_RS08020 bdb661c40e384a32180e15c10cfc4797 775 SUPERFAMILY SSF82866 192 404 7.46E-15 T 28-03-2018 AL504_RS11460 38a520cb44feb156bf3577d010812f83 224 SUPERFAMILY SSF56784 4 215 2.58E-51 T 28-03-2018 IPR023214 HAD-like domain AL504_RS11460 38a520cb44feb156bf3577d010812f83 224 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 5 203 8.7E-52 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL504_RS11460 38a520cb44feb156bf3577d010812f83 224 Gene3D G3DSA:1.10.150.240 17 75 1.2E-11 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL504_RS11460 38a520cb44feb156bf3577d010812f83 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 1.2E-31 T 28-03-2018 IPR023214 HAD-like domain AL504_RS11460 38a520cb44feb156bf3577d010812f83 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 179 9.6E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS11460 38a520cb44feb156bf3577d010812f83 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 183 1.5E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS11460 38a520cb44feb156bf3577d010812f83 224 Gene3D G3DSA:3.40.50.1000 76 223 3.1E-29 T 28-03-2018 IPR023214 HAD-like domain AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 SMART SM00929 83 123 4.1E-20 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 630 5.1E-199 T 28-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 SUPERFAMILY SSF54292 1 74 5.52E-21 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Gene3D G3DSA:2.20.25.90 209 274 4.3E-4 T 28-03-2018 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Gene3D G3DSA:3.40.50.740 425 661 5.2E-27 T 28-03-2018 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 74 3.7E-20 T 28-03-2018 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Gene3D G3DSA:3.10.20.30 1 161 5.1E-16 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 1.9E-16 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Gene3D G3DSA:3.40.50.740 275 424 1.4E-24 T 28-03-2018 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 SUPERFAMILY SSF54862 76 211 4.18E-35 T 28-03-2018 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 SUPERFAMILY SSF53706 214 654 2.3E-85 T 28-03-2018 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Pfam PF00384 Molybdopterin oxidoreductase 273 412 7.9E-18 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Pfam PF00384 Molybdopterin oxidoreductase 524 631 5.1E-12 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12540 4c064634d423888b0a4256e0d5d9d205 775 Gene3D G3DSA:2.40.40.20 691 772 1.5E-5 T 28-03-2018 AL504_RS18905 f5dcd5d7ee25f96006357e2cc60f4949 314 PIRSF PIRSF018266 2 313 1.3E-51 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS18905 f5dcd5d7ee25f96006357e2cc60f4949 314 Pfam PF04773 FecR protein 116 199 9.3E-6 T 28-03-2018 IPR006860 FecR protein AL504_RS18905 f5dcd5d7ee25f96006357e2cc60f4949 314 Pfam PF16220 Domain of unknown function (DUF4880) 11 50 6.2E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS14970 3b0d0c3b5da8b1d12ddc849b003a32ed 190 PRINTS PR00502 NUDIX hydrolase family signature 33 47 9.2E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL504_RS14970 3b0d0c3b5da8b1d12ddc849b003a32ed 190 PRINTS PR00502 NUDIX hydrolase family signature 47 62 9.2E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL504_RS14970 3b0d0c3b5da8b1d12ddc849b003a32ed 190 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL504_RS14970 3b0d0c3b5da8b1d12ddc849b003a32ed 190 Gene3D G3DSA:3.90.79.10 1 164 4.8E-32 T 28-03-2018 AL504_RS14970 3b0d0c3b5da8b1d12ddc849b003a32ed 190 SUPERFAMILY SSF55811 6 165 2.3E-31 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS14970 3b0d0c3b5da8b1d12ddc849b003a32ed 190 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.077 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH AL504_RS14970 3b0d0c3b5da8b1d12ddc849b003a32ed 190 Pfam PF00293 NUDIX domain 7 136 1.4E-23 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS25815 d849e46ee4d8b7447f83106d690bc9ea 211 SUPERFAMILY SSF47616 90 204 1.93E-9 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS25815 d849e46ee4d8b7447f83106d690bc9ea 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 85 2.6E-12 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS25815 d849e46ee4d8b7447f83106d690bc9ea 211 SUPERFAMILY SSF52833 11 92 7.18E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25815 d849e46ee4d8b7447f83106d690bc9ea 211 Gene3D G3DSA:1.20.1050.10 104 207 2.3E-11 T 28-03-2018 AL504_RS25815 d849e46ee4d8b7447f83106d690bc9ea 211 Gene3D G3DSA:3.40.30.10 2 103 9.9E-25 T 28-03-2018 AL504_RS25815 d849e46ee4d8b7447f83106d690bc9ea 211 Pfam PF14834 Glutathione S-transferase, C-terminal domain 97 204 5.9E-35 T 28-03-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AL504_RS14650 9284694d58fd7b83de242e0bd01ed64c 362 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 34 358 4.9E-80 T 28-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 AL504_RS14650 9284694d58fd7b83de242e0bd01ed64c 362 Pfam PF03601 Conserved hypothetical protein 698 34 342 3.0E-91 T 28-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 SUPERFAMILY SSF51735 5 249 6.37E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 Gene3D G3DSA:3.40.50.720 2 45 1.4E-9 T 28-03-2018 AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 Gene3D G3DSA:3.40.50.720 46 250 5.0E-63 T 28-03-2018 AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.8E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.8E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.8E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 2.1E-62 T 28-03-2018 AL504_RS21760 a383f9c5d3a6b31a51c5c66bf4650503 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 0.0019 T 28-03-2018 AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 SUPERFAMILY SSF55031 224 335 4.84E-21 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 PIRSF PIRSF037238 32 423 1.6E-104 T 28-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 Pfam PF01546 Peptidase family M20/M25/M40 118 419 2.9E-25 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 Gene3D G3DSA:3.40.630.10 35 426 5.6E-52 T 28-03-2018 AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 117 126 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 SUPERFAMILY SSF53187 344 421 1.49E-49 T 28-03-2018 AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 SUPERFAMILY SSF53187 33 232 1.49E-49 T 28-03-2018 AL504_RS05100 63596496b7c33c85493fe9d2ad785303 430 Pfam PF07687 Peptidase dimerisation domain 221 319 1.3E-17 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS15355 0f001b86363f88d6153408bdab9439a4 212 Pfam PF06635 Nodulation protein NolV 15 205 2.0E-19 T 28-03-2018 IPR010586 Nodulation NolV GO:0009877 AL504_RS15355 0f001b86363f88d6153408bdab9439a4 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 24 192 4.6E-43 T 28-03-2018 IPR012842 Type III secretion system HrpE/YscL AL504_RS15355 0f001b86363f88d6153408bdab9439a4 212 SUPERFAMILY SSF160527 99 204 7.85E-5 T 28-03-2018 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.1E-72 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.685 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 PIRSF PIRSF002162 1 177 1.3E-48 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 SUPERFAMILY SSF56053 1 82 8.15E-24 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 SUPERFAMILY SSF56053 83 177 2.09E-34 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-31 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-31 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-31 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 Pfam PF00347 Ribosomal protein L6 12 82 7.6E-17 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 Pfam PF00347 Ribosomal protein L6 90 164 6.4E-18 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 Gene3D G3DSA:3.90.930.12 86 177 1.3E-37 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19975 2f4c40056769d1c8e374782680ae7dee 177 Gene3D G3DSA:3.90.930.12 5 85 9.7E-26 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS00985 a3dea1938fb6c627e03c94458c9a85a3 523 Gene3D G3DSA:3.40.190.10 175 285 1.3E-28 T 28-03-2018 AL504_RS00985 a3dea1938fb6c627e03c94458c9a85a3 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 64 433 5.2E-90 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS00985 a3dea1938fb6c627e03c94458c9a85a3 523 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 70 91 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL504_RS00985 a3dea1938fb6c627e03c94458c9a85a3 523 Gene3D G3DSA:3.10.105.10 286 493 3.3E-54 T 28-03-2018 AL504_RS00985 a3dea1938fb6c627e03c94458c9a85a3 523 PIRSF PIRSF002741 6 519 8.0E-103 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS00985 a3dea1938fb6c627e03c94458c9a85a3 523 Gene3D G3DSA:3.90.76.10 32 174 1.1E-30 T 28-03-2018 AL504_RS00985 a3dea1938fb6c627e03c94458c9a85a3 523 SUPERFAMILY SSF53850 19 504 2.9E-127 T 28-03-2018 AL504_RS08290 4b4f1aea4b5057df7199bb0b7b0d61dc 101 Gene3D G3DSA:3.30.70.100 3 100 6.0E-20 T 28-03-2018 AL504_RS08290 4b4f1aea4b5057df7199bb0b7b0d61dc 101 Pfam PF07978 NIPSNAP 6 99 5.0E-26 T 28-03-2018 IPR012577 NIPSNAP AL504_RS08290 4b4f1aea4b5057df7199bb0b7b0d61dc 101 SUPERFAMILY SSF54909 1 99 5.37E-23 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 Pfam PF13433 Periplasmic binding protein domain 39 397 2.3E-139 T 28-03-2018 AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 Gene3D G3DSA:3.40.50.2300 170 317 1.4E-39 T 28-03-2018 AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 39 395 9.7E-157 T 28-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 61 77 9.7E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 9.7E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 39 55 9.7E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 Gene3D G3DSA:3.40.50.2300 22 169 2.9E-22 T 28-03-2018 AL504_RS17045 a675de5ea954490ab204a9fba8da63fe 398 SUPERFAMILY SSF53822 39 395 1.18E-102 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS16615 d91960aca6189951b1de4c237722bda8 337 PIRSF PIRSF017082 10 336 6.5E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16615 d91960aca6189951b1de4c237722bda8 337 Gene3D G3DSA:3.40.190.10 153 272 4.4E-13 T 28-03-2018 AL504_RS16615 d91960aca6189951b1de4c237722bda8 337 Gene3D G3DSA:3.40.190.10 50 152 0.58 T 28-03-2018 AL504_RS16615 d91960aca6189951b1de4c237722bda8 337 SUPERFAMILY SSF53850 129 297 3.73E-15 T 28-03-2018 AL504_RS16615 d91960aca6189951b1de4c237722bda8 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 63 333 3.1E-65 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11650 101fe131717c179aa46ba9b8c2fa26f9 102 Pfam PF12365 Protein of unknown function (DUF3649) 69 94 2.1E-11 T 28-03-2018 IPR022109 Protein of unknown function DUF3649 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 SUPERFAMILY SSF52540 62 397 5.94E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 Gene3D G3DSA:1.10.8.60 316 407 7.1E-31 T 28-03-2018 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 6 414 52.16 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 SMART SM00994 12 51 1.7E-23 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 SMART SM01086 316 411 2.4E-33 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 SMART SM00382 112 332 1.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 Pfam PF06689 ClpX C4-type zinc finger 13 50 4.7E-19 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 309 3.2E-47 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 Gene3D G3DSA:3.40.50.300 56 314 1.6E-68 T 28-03-2018 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 411 5.7E-198 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 393 4.8E-17 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS31225 66513decaf5392ef208e7b59fd6194da 432 SUPERFAMILY SSF57716 13 48 3.85E-11 T 28-03-2018 AL504_RS07950 0ddfaa1ecf6be80371a784a357bb2af0 415 SUPERFAMILY SSF51905 107 271 1.75E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07950 0ddfaa1ecf6be80371a784a357bb2af0 415 SUPERFAMILY SSF51905 361 414 1.75E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07950 0ddfaa1ecf6be80371a784a357bb2af0 415 SUPERFAMILY SSF51905 1 54 1.75E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07950 0ddfaa1ecf6be80371a784a357bb2af0 415 SUPERFAMILY SSF54373 271 361 2.49E-11 T 28-03-2018 AL504_RS07950 0ddfaa1ecf6be80371a784a357bb2af0 415 Pfam PF01266 FAD dependent oxidoreductase 2 399 2.5E-61 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS07950 0ddfaa1ecf6be80371a784a357bb2af0 415 Gene3D G3DSA:3.50.50.60 1 415 3.9E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 SUPERFAMILY SSF47729 1 90 8.54E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 SMART SM00411 1 90 8.0E-40 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-35 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.7E-34 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.9E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.9E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS10155 c745a7aeca693f692bd579c71c350d1a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.9E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS15895 edcc109af3c9d7d55468dffef579b64c 405 SUPERFAMILY SSF53383 9 403 2.58E-108 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS15895 edcc109af3c9d7d55468dffef579b64c 405 Gene3D G3DSA:3.90.1150.10 280 405 7.1E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS15895 edcc109af3c9d7d55468dffef579b64c 405 Pfam PF00155 Aminotransferase class I and II 37 397 1.2E-65 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS15895 edcc109af3c9d7d55468dffef579b64c 405 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 241 254 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL504_RS15895 edcc109af3c9d7d55468dffef579b64c 405 Gene3D G3DSA:3.40.640.10 50 279 2.0E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS13570 ace8107bf892133a258460c7de41e429 252 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 212 4.4E-69 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL504_RS13570 ace8107bf892133a258460c7de41e429 252 SUPERFAMILY SSF55729 3 233 1.96E-85 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS13570 ace8107bf892133a258460c7de41e429 252 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 38 224 3.9E-52 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL504_RS13570 ace8107bf892133a258460c7de41e429 252 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 252 94.826 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 9 217 7.0E-83 T 28-03-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 Pfam PF00813 FliP family 12 217 7.1E-69 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 2.0E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 2.0E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 29 49 2.0E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 2.0E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 10 29 2.0E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS15330 f33e27cef9f4bfc5f0c7bd68129566a9 222 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 2.0E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 Gene3D G3DSA:3.40.47.10 265 389 2.7E-28 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 Gene3D G3DSA:3.40.47.10 3 264 4.3E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 Pfam PF02803 Thiolase, C-terminal domain 269 391 1.2E-36 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 SUPERFAMILY SSF53901 270 391 4.21E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 SUPERFAMILY SSF53901 6 269 7.02E-69 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 Pfam PF00108 Thiolase, N-terminal domain 7 261 1.1E-63 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 PIRSF PIRSF000429 1 393 2.9E-117 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS18260 3a825deca81d3ca93d57e30c64fc60e7 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 390 4.5E-122 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 Gene3D G3DSA:3.40.50.300 337 591 8.9E-75 T 28-03-2018 AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 Pfam PF00664 ABC transporter transmembrane region 35 304 9.5E-44 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 SUPERFAMILY SSF90123 22 337 2.09E-70 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 SUPERFAMILY SSF52540 342 588 1.78E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 20 590 2.7E-261 T 28-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 SMART SM00382 376 563 1.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 Gene3D G3DSA:1.20.1560.10 5 336 5.8E-61 T 28-03-2018 AL504_RS09865 af23bb4f4186bdd844ce6f562d00baac 591 Pfam PF00005 ABC transporter 368 517 3.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 286 438 6.7E-45 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SUPERFAMILY SSF58104 265 443 1.96E-47 T 28-03-2018 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SUPERFAMILY SSF55785 156 256 8.55E-27 T 28-03-2018 IPR000014 PAS domain AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 Gene3D G3DSA:1.10.287.950 261 449 3.2E-37 T 28-03-2018 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 Gene3D G3DSA:3.40.50.10600 14 136 1.6E-34 T 28-03-2018 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 Gene3D G3DSA:3.40.50.10600 137 260 7.6E-33 T 28-03-2018 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SUPERFAMILY SSF55785 33 138 1.34E-28 T 28-03-2018 IPR000014 PAS domain AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SMART SM00091 22 90 0.039 T 28-03-2018 IPR000014 PAS domain AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SMART SM00091 144 212 0.14 T 28-03-2018 IPR000014 PAS domain AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 265 1.7E-20 T 28-03-2018 IPR000014 PAS domain AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 142 8.1E-18 T 28-03-2018 IPR000014 PAS domain AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 Pfam PF08447 PAS fold 45 130 9.0E-17 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 Pfam PF08447 PAS fold 167 252 1.1E-15 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SMART SM00283 248 482 1.1E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SMART SM00086 217 259 2.3E-5 T 28-03-2018 IPR001610 PAC motif AL504_RS14330 f9a0ef66f30e19ecece2ff84e158a725 484 SMART SM00086 95 137 3.4E-5 T 28-03-2018 IPR001610 PAC motif AL504_RS23745 1af8ddae7b3dc0c5a8f2fc7f511062d4 255 Pfam PF06966 Protein of unknown function (DUF1295) 21 245 4.7E-67 T 28-03-2018 IPR010721 Protein of unknown function DUF1295 AL504_RS10440 5401f036cf33f7c3f64904db647da3f7 170 Pfam PF00583 Acetyltransferase (GNAT) family 48 132 3.7E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS10440 5401f036cf33f7c3f64904db647da3f7 170 Gene3D G3DSA:3.40.630.30 83 142 4.4E-13 T 28-03-2018 AL504_RS10440 5401f036cf33f7c3f64904db647da3f7 170 SUPERFAMILY SSF55729 1 137 1.64E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS10440 5401f036cf33f7c3f64904db647da3f7 170 Gene3D G3DSA:3.40.630.30 1 82 2.1E-9 T 28-03-2018 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 PIRSF PIRSF004862 2 557 1.4E-151 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 Pfam PF08345 Flagellar M-ring protein C-terminal 254 447 1.4E-47 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 PRINTS PR01009 Flagellar M-ring protein signature 123 141 7.8E-41 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 PRINTS PR01009 Flagellar M-ring protein signature 155 169 7.8E-41 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 PRINTS PR01009 Flagellar M-ring protein signature 375 399 7.8E-41 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 PRINTS PR01009 Flagellar M-ring protein signature 198 216 7.8E-41 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 PRINTS PR01009 Flagellar M-ring protein signature 267 285 7.8E-41 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 17 555 1.8E-120 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 Pfam PF01514 Secretory protein of YscJ/FliF family 33 222 8.9E-77 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF AL504_RS06315 fea2a1936af0ca8af1c6dbfc38569a0b 557 Gene3D G3DSA:3.30.70.1530 54 117 1.7E-9 T 28-03-2018 AL504_RS05050 c0f7673674a7d6fbf34425f9b31a2a03 311 Pfam PF00892 EamA-like transporter family 19 151 1.5E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS05050 c0f7673674a7d6fbf34425f9b31a2a03 311 Pfam PF00892 EamA-like transporter family 161 291 3.0E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS05050 c0f7673674a7d6fbf34425f9b31a2a03 311 SUPERFAMILY SSF103481 202 301 1.44E-15 T 28-03-2018 AL504_RS05050 c0f7673674a7d6fbf34425f9b31a2a03 311 SUPERFAMILY SSF103481 60 155 1.14E-8 T 28-03-2018 AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 Gene3D G3DSA:3.40.50.300 8 155 2.4E-25 T 28-03-2018 AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 432 5.6E-67 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 Gene3D G3DSA:1.10.8.60 156 242 6.3E-19 T 28-03-2018 AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 Gene3D G3DSA:1.20.272.10 253 347 6.7E-38 T 28-03-2018 AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 Pfam PF16193 AAA C-terminal domain 192 268 2.5E-21 T 28-03-2018 IPR032423 AAA C-terminal domain AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 Gene3D G3DSA:1.10.3710.10 349 446 3.2E-35 T 28-03-2018 AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 SUPERFAMILY SSF52540 13 237 1.34E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 SMART SM00382 51 167 6.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 SUPERFAMILY SSF48019 253 434 2.21E-72 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL504_RS13225 bae8cc362a0297a1eab7a43b65400378 446 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 19 132 1.9E-12 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 SMART SM00965 87 138 1.2E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 180 831 7.9E-108 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 SUPERFAMILY SSF56935 156 831 2.38E-124 T 28-03-2018 AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 Pfam PF00593 TonB dependent receptor 364 828 4.7E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 814 831 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 Gene3D G3DSA:2.40.170.20 295 831 6.6E-76 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 Pfam PF07715 TonB-dependent Receptor Plug Domain 178 282 3.6E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS19390 6f9774181eb0685c456bcfada820e937 831 Gene3D G3DSA:2.170.130.10 141 289 1.2E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS15320 8ecb1cfd46742753d3fe5cc1078fe0bf 266 Pfam PF01311 Bacterial export proteins, family 1 16 248 2.4E-54 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS15320 8ecb1cfd46742753d3fe5cc1078fe0bf 266 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 9 259 8.1E-84 T 28-03-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 AL504_RS15320 8ecb1cfd46742753d3fe5cc1078fe0bf 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 207 226 3.1E-31 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS15320 8ecb1cfd46742753d3fe5cc1078fe0bf 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 23 44 3.1E-31 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS15320 8ecb1cfd46742753d3fe5cc1078fe0bf 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 83 102 3.1E-31 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS15320 8ecb1cfd46742753d3fe5cc1078fe0bf 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 185 207 3.1E-31 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 ProSitePatterns PS00211 ABC transporters family signature. 643 657 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 SMART SM00382 531 723 7.1E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 SUPERFAMILY SSF52540 496 741 2.46E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 SUPERFAMILY SSF90123 172 486 6.28E-77 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 Gene3D G3DSA:1.20.1560.10 164 493 1.4E-67 T 28-03-2018 AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 Pfam PF00005 ABC transporter 524 671 8.8E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 Pfam PF00664 ABC transporter transmembrane region 185 457 2.5E-44 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS11510 8a0efafdf75491cc2e97fec7f3612662 761 Gene3D G3DSA:3.40.50.300 494 747 5.0E-82 T 28-03-2018 AL504_RS17325 92d5e25262a250fabcc3efb82ade4c7a 268 SUPERFAMILY SSF53850 30 268 5.7E-79 T 28-03-2018 AL504_RS17325 92d5e25262a250fabcc3efb82ade4c7a 268 PIRSF PIRSF002854 1 268 1.2E-97 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS17325 92d5e25262a250fabcc3efb82ade4c7a 268 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 266 8.7E-72 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS17325 92d5e25262a250fabcc3efb82ade4c7a 268 Gene3D G3DSA:3.40.190.10 123 268 4.3E-49 T 28-03-2018 AL504_RS17325 92d5e25262a250fabcc3efb82ade4c7a 268 Pfam PF03180 NLPA lipoprotein 31 268 3.4E-85 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS17325 92d5e25262a250fabcc3efb82ade4c7a 268 Gene3D G3DSA:3.40.190.10 30 122 8.2E-19 T 28-03-2018 AL504_RS28840 8680f913f4a029420687048712291d49 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 2.4E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS28840 8680f913f4a029420687048712291d49 219 Gene3D G3DSA:1.10.3720.10 5 219 2.3E-40 T 28-03-2018 AL504_RS28840 8680f913f4a029420687048712291d49 219 SUPERFAMILY SSF161098 13 200 1.31E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS28840 8680f913f4a029420687048712291d49 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 108 2.3E-23 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS17830 c914ee9ad97a047059159fbd2f1fe4bc 962 Pfam PF00999 Sodium/hydrogen exchanger family 14 413 2.1E-62 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL504_RS17830 c914ee9ad97a047059159fbd2f1fe4bc 962 SUPERFAMILY SSF51206 695 820 2.09E-23 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS17830 c914ee9ad97a047059159fbd2f1fe4bc 962 SMART SM00100 703 819 1.7E-9 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS17830 c914ee9ad97a047059159fbd2f1fe4bc 962 Pfam PF00027 Cyclic nucleotide-binding domain 726 804 1.9E-11 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS17830 c914ee9ad97a047059159fbd2f1fe4bc 962 Gene3D G3DSA:2.60.120.10 692 831 3.2E-23 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 Pfam PF03466 LysR substrate binding domain 94 297 5.6E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 Gene3D G3DSA:3.40.190.10 94 179 5.2E-21 T 28-03-2018 AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 Gene3D G3DSA:3.40.190.10 180 264 4.9E-24 T 28-03-2018 AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 SUPERFAMILY SSF53850 96 298 2.95E-41 T 28-03-2018 AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 Gene3D G3DSA:1.10.10.10 8 90 7.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 4.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 SUPERFAMILY SSF46785 9 89 4.48E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18410 f105c837b6d48e69765b0c8ed01c61ad 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 Gene3D G3DSA:4.10.520.10 10 107 1.9E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 11 104 1.7E-43 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 Pfam PF00216 Bacterial DNA-binding protein 12 100 2.3E-31 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 57 76 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 SUPERFAMILY SSF47729 12 101 1.27E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 SMART SM00411 12 101 7.0E-44 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 PRINTS PR01727 Prokaryotic integration host factor signature 51 66 5.4E-14 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 PRINTS PR01727 Prokaryotic integration host factor signature 85 99 5.4E-14 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 PRINTS PR01727 Prokaryotic integration host factor signature 69 82 5.4E-14 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS08340 163adf89acb774dfa12bdfaeea6f72b1 112 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 10 106 30.041 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL504_RS13390 9abe9ecc7baf6a7337933bfd8fd4e174 117 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 45 112 3.9E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS13390 9abe9ecc7baf6a7337933bfd8fd4e174 117 SUPERFAMILY SSF46626 12 117 3.05E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS13390 9abe9ecc7baf6a7337933bfd8fd4e174 117 Gene3D G3DSA:1.10.760.10 8 116 5.0E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS13075 b133bfab6b3070a21188a1dc38bb1327 323 Gene3D G3DSA:3.30.700.10 210 323 5.6E-4 T 28-03-2018 AL504_RS13075 b133bfab6b3070a21188a1dc38bb1327 323 Pfam PF06271 RDD family 18 173 4.0E-12 T 28-03-2018 IPR010432 RDD AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 Gene3D G3DSA:3.50.50.60 15 421 1.7E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 Pfam PF12831 FAD dependent oxidoreductase 17 439 3.7E-107 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 351 4.2E-7 T 28-03-2018 AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 17 39 4.2E-7 T 28-03-2018 AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 SUPERFAMILY SSF51905 15 189 1.77E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 SUPERFAMILY SSF51905 371 421 1.77E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 SUPERFAMILY SSF51971 15 60 5.65E-10 T 28-03-2018 AL504_RS16235 28f2a3780a8b920148eaf24d44183b2a 450 SUPERFAMILY SSF51971 176 404 5.65E-10 T 28-03-2018 AL504_RS05495 e806728bfb64de33dfa4d08a3e4f1135 263 Gene3D G3DSA:1.10.357.10 65 229 7.1E-22 T 28-03-2018 AL504_RS05495 e806728bfb64de33dfa4d08a3e4f1135 263 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 6.6E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS05495 e806728bfb64de33dfa4d08a3e4f1135 263 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 6.6E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS05495 e806728bfb64de33dfa4d08a3e4f1135 263 SUPERFAMILY SSF46689 13 90 1.64E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS05495 e806728bfb64de33dfa4d08a3e4f1135 263 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 6.5E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS05495 e806728bfb64de33dfa4d08a3e4f1135 263 Gene3D G3DSA:1.10.10.60 1 64 1.7E-21 T 28-03-2018 AL504_RS05495 e806728bfb64de33dfa4d08a3e4f1135 263 SUPERFAMILY SSF48498 105 224 1.7E-13 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 Gene3D G3DSA:3.40.1160.10 2 300 7.4E-72 T 28-03-2018 AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 Hamap MF_00082_B Acetylglutamate kinase [argB]. 31 299 35.41 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 PRINTS PR00474 Glutamate 5-kinase family signature 64 78 4.3E-6 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 PRINTS PR00474 Glutamate 5-kinase family signature 199 226 4.3E-6 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 PRINTS PR00474 Glutamate 5-kinase family signature 249 269 4.3E-6 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 TIGRFAM TIGR00761 argB: acetylglutamate kinase 34 274 2.2E-73 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 SUPERFAMILY SSF53633 16 299 7.33E-90 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 Pfam PF00696 Amino acid kinase family 33 276 1.3E-43 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS21040 f867007cf8d3f9fd7d0c33abdb1fa09d 300 PIRSF PIRSF000728 18 299 1.2E-101 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 95 116 5.3E-27 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 16 33 5.3E-27 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 161 181 5.3E-27 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 244 262 5.3E-27 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 138 160 5.3E-27 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 202 219 5.3E-27 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 SUPERFAMILY SSF63829 11 288 2.94E-55 T 28-03-2018 AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 15 262 7.9E-70 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AL504_RS23195 52cfeb4bd5faa555a7a53baddbab483b 293 Gene3D G3DSA:2.120.10.30 9 291 5.6E-30 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS06190 d29a6a60951d1b226313d5c03a30dcbc 238 Gene3D G3DSA:3.40.1160.10 1 238 1.1E-43 T 28-03-2018 AL504_RS06190 d29a6a60951d1b226313d5c03a30dcbc 238 PIRSF PIRSF005650 1 238 3.4E-91 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AL504_RS06190 d29a6a60951d1b226313d5c03a30dcbc 238 Pfam PF00696 Amino acid kinase family 7 216 4.2E-28 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS06190 d29a6a60951d1b226313d5c03a30dcbc 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.241 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL504_RS06190 d29a6a60951d1b226313d5c03a30dcbc 238 SUPERFAMILY SSF53633 5 237 9.69E-70 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS06190 d29a6a60951d1b226313d5c03a30dcbc 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 5.3E-100 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL504_RS18245 2c01e80f28dbe94d9101ee043477321f 262 Gene3D G3DSA:3.90.226.10 5 220 2.0E-55 T 28-03-2018 AL504_RS18245 2c01e80f28dbe94d9101ee043477321f 262 SUPERFAMILY SSF52096 1 262 2.03E-70 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS18245 2c01e80f28dbe94d9101ee043477321f 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 261 5.7E-49 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS18245 2c01e80f28dbe94d9101ee043477321f 262 Gene3D G3DSA:1.10.12.10 221 262 5.0E-11 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS21495 43758af6e423f8fa2852b98a5ae753a8 287 Pfam PF13354 Beta-lactamase enzyme family 40 246 5.1E-51 T 28-03-2018 AL504_RS21495 43758af6e423f8fa2852b98a5ae753a8 287 Gene3D G3DSA:3.40.710.10 15 281 9.9E-31 T 28-03-2018 AL504_RS21495 43758af6e423f8fa2852b98a5ae753a8 287 SUPERFAMILY SSF56601 18 253 2.07E-42 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS09230 36e0b4af7e5031f3a340837b6509d910 418 Pfam PF01266 FAD dependent oxidoreductase 2 403 1.2E-66 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS09230 36e0b4af7e5031f3a340837b6509d910 418 Gene3D G3DSA:3.50.50.60 1 416 5.2E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS09230 36e0b4af7e5031f3a340837b6509d910 418 SUPERFAMILY SSF51905 1 54 7.12E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS09230 36e0b4af7e5031f3a340837b6509d910 418 SUPERFAMILY SSF51905 107 275 7.12E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS09230 36e0b4af7e5031f3a340837b6509d910 418 SUPERFAMILY SSF51905 365 413 7.12E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS09230 36e0b4af7e5031f3a340837b6509d910 418 SUPERFAMILY SSF54373 275 365 1.44E-15 T 28-03-2018 AL504_RS30665 7dc4984a6e18980bdf824d437700d3ae 398 SUPERFAMILY SSF102645 184 396 4.45E-68 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL504_RS30665 7dc4984a6e18980bdf824d437700d3ae 398 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 392 6.2E-126 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AL504_RS30665 7dc4984a6e18980bdf824d437700d3ae 398 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 367 3.3E-62 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL504_RS30665 7dc4984a6e18980bdf824d437700d3ae 398 Gene3D G3DSA:3.40.50.1950 1 182 4.0E-58 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL504_RS30665 7dc4984a6e18980bdf824d437700d3ae 398 Pfam PF02441 Flavoprotein 7 178 3.9E-43 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL504_RS30665 7dc4984a6e18980bdf824d437700d3ae 398 Gene3D G3DSA:3.40.50.10300 183 397 1.0E-60 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL504_RS30665 7dc4984a6e18980bdf824d437700d3ae 398 SUPERFAMILY SSF52507 3 182 2.35E-59 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL504_RS03660 119eadf12e4fa3b4fe1a76961ec4c861 306 Gene3D G3DSA:1.10.10.60 240 293 9.5E-13 T 28-03-2018 AL504_RS03660 119eadf12e4fa3b4fe1a76961ec4c861 306 Gene3D G3DSA:1.10.10.60 23 239 3.1E-13 T 28-03-2018 AL504_RS03660 119eadf12e4fa3b4fe1a76961ec4c861 306 Pfam PF06719 AraC-type transcriptional regulator N-terminus 23 172 4.5E-40 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AL504_RS03660 119eadf12e4fa3b4fe1a76961ec4c861 306 Pfam PF12833 Helix-turn-helix domain 207 283 1.3E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS03660 119eadf12e4fa3b4fe1a76961ec4c861 306 SMART SM00342 201 284 6.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS03660 119eadf12e4fa3b4fe1a76961ec4c861 306 SUPERFAMILY SSF46689 185 235 2.44E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS03660 119eadf12e4fa3b4fe1a76961ec4c861 306 SUPERFAMILY SSF46689 238 288 2.96E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24465 a10eb6463de3811325ca6ed23f26859c 388 SUPERFAMILY SSF51604 123 384 1.56E-57 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS24465 a10eb6463de3811325ca6ed23f26859c 388 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 134 2.5E-5 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL504_RS24465 a10eb6463de3811325ca6ed23f26859c 388 SUPERFAMILY SSF54826 1 138 4.66E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS24465 a10eb6463de3811325ca6ed23f26859c 388 SMART SM00922 162 259 7.4E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL504_RS24465 a10eb6463de3811325ca6ed23f26859c 388 Gene3D G3DSA:3.20.20.120 116 371 5.3E-49 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS24465 a10eb6463de3811325ca6ed23f26859c 388 Pfam PF13378 Enolase C-terminal domain-like 165 376 9.0E-43 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS24465 a10eb6463de3811325ca6ed23f26859c 388 Gene3D G3DSA:3.30.390.10 1 115 5.8E-66 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01200 62c99e5c1976234053ea698682187c7e 100 SMART SM00418 5 94 1.3E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS01200 62c99e5c1976234053ea698682187c7e 100 Pfam PF12840 Helix-turn-helix domain 5 77 5.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01200 62c99e5c1976234053ea698682187c7e 100 SUPERFAMILY SSF46785 2 96 8.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01200 62c99e5c1976234053ea698682187c7e 100 Gene3D G3DSA:1.10.10.10 1 96 2.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 2.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 SUPERFAMILY SSF53850 95 304 7.96E-46 T 28-03-2018 AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 Gene3D G3DSA:1.10.10.10 2 92 1.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 SUPERFAMILY SSF46785 5 116 2.34E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 Gene3D G3DSA:3.40.190.10 93 178 2.8E-18 T 28-03-2018 AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 Pfam PF03466 LysR substrate binding domain 93 301 3.7E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24050 7613e6bebbb6dcb9db4403fe84342efb 311 Gene3D G3DSA:3.40.190.10 179 268 1.0E-26 T 28-03-2018 AL504_RS10625 12f80fff32632a769dd38362abf968f5 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 247 2.1E-5 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS10625 12f80fff32632a769dd38362abf968f5 253 SUPERFAMILY SSF52540 6 247 2.71E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10625 12f80fff32632a769dd38362abf968f5 253 Gene3D G3DSA:3.40.50.300 3 251 2.8E-49 T 28-03-2018 AL504_RS10625 12f80fff32632a769dd38362abf968f5 253 Pfam PF00005 ABC transporter 23 178 1.5E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS10625 12f80fff32632a769dd38362abf968f5 253 SMART SM00382 31 225 3.4E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS24875 6ceb741d5ca43404f452e510b833df9f 180 SUPERFAMILY SSF69118 1 174 5.96E-55 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS24875 6ceb741d5ca43404f452e510b833df9f 180 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 2 170 6.8E-27 T 28-03-2018 IPR010195 Uncharacterised peroxidase-related AL504_RS24875 6ceb741d5ca43404f452e510b833df9f 180 Gene3D G3DSA:1.20.5.810 11 43 7.0E-14 T 28-03-2018 AL504_RS24875 6ceb741d5ca43404f452e510b833df9f 180 Gene3D G3DSA:1.20.1290.10 44 176 1.5E-35 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS24875 6ceb741d5ca43404f452e510b833df9f 180 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 122 7.2E-13 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS24875 6ceb741d5ca43404f452e510b833df9f 180 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 106 1.7E-15 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 21 1075 13.875 T 28-03-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 724 1.1E-145 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 SMART SM00481 22 89 1.7E-10 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 Gene3D G3DSA:3.20.20.140 20 260 8.4E-27 T 28-03-2018 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 SUPERFAMILY SSF89550 26 82 4.51E-5 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 22 1019 8.0E-152 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 Pfam PF02811 PHP domain 23 128 3.5E-15 T 28-03-2018 IPR004013 PHP domain GO:0003824 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 Pfam PF14579 Helix-hairpin-helix motif 800 906 5.5E-19 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 Pfam PF01336 OB-fold nucleic acid binding domain 988 1057 2.4E-6 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL504_RS05650 d36ea063e2aba84a88f0e18bc0edfcf9 1075 Gene3D G3DSA:2.40.50.140 954 1064 1.9E-7 T 28-03-2018 AL504_RS23640 eb9b9116aadc76258640d56ea02f353f 362 Gene3D G3DSA:3.40.50.1820 28 350 7.4E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23640 eb9b9116aadc76258640d56ea02f353f 362 SUPERFAMILY SSF53474 81 336 4.95E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23640 eb9b9116aadc76258640d56ea02f353f 362 Pfam PF12697 Alpha/beta hydrolase family 84 338 7.9E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 378 390 1.5E-13 T 28-03-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 80 96 1.5E-13 T 28-03-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 294 306 1.5E-13 T 28-03-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 230 243 1.5E-13 T 28-03-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 213 229 1.5E-13 T 28-03-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 333 345 1.5E-13 T 28-03-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 160 175 1.5E-13 T 28-03-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 Pfam PF00174 Oxidoreductase molybdopterin binding domain 96 267 1.3E-49 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 Gene3D G3DSA:2.60.40.650 296 411 5.6E-31 T 28-03-2018 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 SUPERFAMILY SSF81296 297 409 1.12E-30 T 28-03-2018 IPR014756 Immunoglobulin E-set AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 Gene3D G3DSA:3.90.420.10 37 295 6.5E-66 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 SUPERFAMILY SSF56524 57 327 7.72E-73 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS17435 c0f989a6165dc7679bed87bb00b83242 411 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 294 407 6.0E-12 T 28-03-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 SUPERFAMILY SSF52283 1 167 6.46E-47 T 28-03-2018 AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 Gene3D G3DSA:3.40.50.720 1 193 3.6E-48 T 28-03-2018 AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 Gene3D G3DSA:3.40.50.720 194 372 7.3E-46 T 28-03-2018 AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 SMART SM01002 145 314 3.4E-82 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 370 3.1E-72 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 SMART SM01003 4 136 1.2E-61 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.5E-38 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL504_RS10500 9e31ca1021e4dca5529f413a272b1cea 372 SUPERFAMILY SSF51735 136 320 2.18E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04575 6c41fcac80da4852b5aabad46ef28c12 233 Gene3D G3DSA:3.40.50.300 1 233 6.0E-56 T 28-03-2018 AL504_RS04575 6c41fcac80da4852b5aabad46ef28c12 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04575 6c41fcac80da4852b5aabad46ef28c12 233 PIRSF PIRSF039137 1 233 6.8E-106 T 28-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AL504_RS04575 6c41fcac80da4852b5aabad46ef28c12 233 Pfam PF00005 ABC transporter 17 161 3.8E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04575 6c41fcac80da4852b5aabad46ef28c12 233 SMART SM00382 26 212 7.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04575 6c41fcac80da4852b5aabad46ef28c12 233 SUPERFAMILY SSF52540 2 230 5.95E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 46 242 1.6E-90 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 154 5.5E-32 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 164 176 5.5E-32 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 128 5.5E-32 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 102 114 5.5E-32 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 42 51 5.5E-32 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 232 242 5.5E-32 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 44 63 1.8E-63 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 83 1.8E-63 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 191 1.8E-63 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 241 1.8E-63 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 102 1.8E-63 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 192 213 1.8E-63 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 219 231 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 171 186 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS06365 32a4a845ddcd7662f202482f71f3fec0 244 Pfam PF00813 FliP family 46 238 4.3E-78 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL504_RS23460 5025ec6bffff01d539f247e329d8f855 132 Gene3D G3DSA:1.10.3830.10 15 127 1.1E-36 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL504_RS23460 5025ec6bffff01d539f247e329d8f855 132 Pfam PF01219 Prokaryotic diacylglycerol kinase 24 123 2.7E-32 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL504_RS22735 a0eaf359777aec780a30bbd51e538218 300 SUPERFAMILY SSF46626 183 284 2.87E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22735 a0eaf359777aec780a30bbd51e538218 300 Gene3D G3DSA:1.10.760.10 162 277 9.8E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22735 a0eaf359777aec780a30bbd51e538218 300 Gene3D G3DSA:1.10.760.10 65 161 1.9E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22735 a0eaf359777aec780a30bbd51e538218 300 SUPERFAMILY SSF46626 60 167 1.35E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS22735 a0eaf359777aec780a30bbd51e538218 300 Pfam PF00034 Cytochrome c 186 275 9.8E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS17980 7eb7a5cf33b71029848672cc7e7765da 426 Gene3D G3DSA:3.65.10.10 221 418 2.4E-41 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS17980 7eb7a5cf33b71029848672cc7e7765da 426 SUPERFAMILY SSF55205 1 416 3.76E-137 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL504_RS17980 7eb7a5cf33b71029848672cc7e7765da 426 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.5E-170 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS17980 7eb7a5cf33b71029848672cc7e7765da 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 4.8E-104 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS17980 7eb7a5cf33b71029848672cc7e7765da 426 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 43.43 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS17980 7eb7a5cf33b71029848672cc7e7765da 426 Gene3D G3DSA:3.65.10.10 21 220 3.4E-49 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS02975 62d50d56490db8ca174b83cbee1bd168 414 SUPERFAMILY SSF53383 10 402 1.79E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS02975 62d50d56490db8ca174b83cbee1bd168 414 Pfam PF00155 Aminotransferase class I and II 39 398 1.5E-66 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS02975 62d50d56490db8ca174b83cbee1bd168 414 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 241 254 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL504_RS02975 62d50d56490db8ca174b83cbee1bd168 414 Gene3D G3DSA:3.40.640.10 60 278 4.2E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS02975 62d50d56490db8ca174b83cbee1bd168 414 Gene3D G3DSA:3.90.1150.10 279 407 4.4E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS11310 ea21aaf1a410d1fd29a36af5c12feafe 342 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 29 336 2.9E-148 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AL504_RS11310 ea21aaf1a410d1fd29a36af5c12feafe 342 Gene3D G3DSA:3.40.190.10 29 135 2.2E-24 T 28-03-2018 AL504_RS11310 ea21aaf1a410d1fd29a36af5c12feafe 342 Pfam PF13531 Bacterial extracellular solute-binding protein 39 289 4.6E-45 T 28-03-2018 AL504_RS11310 ea21aaf1a410d1fd29a36af5c12feafe 342 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 154 162 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AL504_RS11310 ea21aaf1a410d1fd29a36af5c12feafe 342 SUPERFAMILY SSF53850 29 338 1.06E-92 T 28-03-2018 AL504_RS11310 ea21aaf1a410d1fd29a36af5c12feafe 342 Gene3D G3DSA:3.40.190.10 136 339 4.1E-51 T 28-03-2018 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Gene3D G3DSA:3.40.1440.10 4 101 6.5E-22 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 SUPERFAMILY SSF47781 521 608 9.53E-19 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 588 2.4E-166 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 SMART SM00465 17 98 6.8E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Pfam PF14520 Helix-hairpin-helix domain 556 608 1.1E-8 T 28-03-2018 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 SUPERFAMILY SSF46600 190 242 2.75E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Pfam PF02151 UvrB/uvrC motif 206 235 1.2E-6 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Gene3D G3DSA:4.10.860.10 182 243 3.5E-13 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 606 26.883 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 394 541 8.7E-46 T 28-03-2018 IPR001162 UvrC family homology region AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Pfam PF01541 GIY-YIG catalytic domain 19 93 7.1E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 SUPERFAMILY SSF82771 17 100 7.19E-22 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 Gene3D G3DSA:1.10.150.20 554 609 2.6E-12 T 28-03-2018 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 SMART SM00278 587 606 0.23 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS27140 d6b54de218591ab8a199dbb816966d86 609 SMART SM00278 555 574 15.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Gene3D G3DSA:2.40.30.10 302 395 1.5E-32 T 28-03-2018 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Gene3D G3DSA:3.40.50.300 2 74 9.9E-11 T 28-03-2018 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 SUPERFAMILY SSF50447 207 303 2.55E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 4.1E-15 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.7E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.8E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.5E-32 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Gene3D G3DSA:3.40.50.300 75 205 1.5E-30 T 28-03-2018 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 SUPERFAMILY SSF52540 5 221 1.35E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.178 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.1E-226 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 Gene3D G3DSA:2.40.30.10 208 301 2.3E-30 T 28-03-2018 AL504_RS19690 ec9b707dafd93fadeeada459ba5e586e 396 SUPERFAMILY SSF50465 304 396 9.5E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 Pfam PF07729 FCD domain 106 232 3.6E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 Gene3D G3DSA:1.10.10.10 14 85 2.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 SMART SM00895 106 232 3.0E-22 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 Gene3D G3DSA:1.20.120.530 104 242 2.9E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 SUPERFAMILY SSF46785 21 88 7.54E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 SUPERFAMILY SSF48008 104 236 4.97E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 1.4E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16405 23c34dbc8bcfb4c81ab505a34a31e3c5 242 SMART SM00345 25 84 3.1E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS11060 ec47d4986e89101e632f76e63b96e446 249 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 219 5.3E-78 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11060 ec47d4986e89101e632f76e63b96e446 249 Gene3D G3DSA:3.30.2350.10 8 230 4.4E-81 T 28-03-2018 AL504_RS11060 ec47d4986e89101e632f76e63b96e446 249 SUPERFAMILY SSF55120 9 226 2.4E-80 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11060 ec47d4986e89101e632f76e63b96e446 249 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 180 1.9E-57 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AL504_RS11060 ec47d4986e89101e632f76e63b96e446 249 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 222 6.8E-15 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AL504_RS11060 ec47d4986e89101e632f76e63b96e446 249 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 245 18.601 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS18635 fc8f8077dd054ef77a4e0d0a03a090d9 324 Gene3D G3DSA:3.40.50.1820 5 324 4.8E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS18635 fc8f8077dd054ef77a4e0d0a03a090d9 324 SUPERFAMILY SSF53474 65 321 1.02E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 Gene3D G3DSA:3.40.640.10 14 261 4.5E-67 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 Pfam PF00266 Aminotransferase class-V 6 367 8.6E-91 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 4 403 8.1E-229 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 SUPERFAMILY SSF53383 5 390 6.45E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 Gene3D G3DSA:3.90.1150.10 268 383 1.1E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 PIRSF PIRSF005572 3 383 8.5E-136 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL504_RS31260 f0aaa180ac8cf40e7a1568c69376ff5f 403 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 2 394 55.617 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Gene3D G3DSA:2.60.120.10 11 206 4.6E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SMART SM00450 210 307 1.5E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SMART SM00450 581 675 7.6E-5 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SMART SM00450 470 567 1.5 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SMART SM00450 332 431 0.16 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Gene3D G3DSA:3.40.250.10 207 314 1.4E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Gene3D G3DSA:3.40.250.10 567 683 6.9E-13 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SUPERFAMILY SSF51182 21 203 9.64E-28 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Gene3D G3DSA:3.40.250.10 317 453 4.7E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Gene3D G3DSA:3.40.250.10 469 556 3.4E-13 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SUPERFAMILY SSF52821 460 554 8.25E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Pfam PF00581 Rhodanese-like domain 586 671 8.0E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Pfam PF00581 Rhodanese-like domain 486 554 5.5E-5 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Pfam PF00581 Rhodanese-like domain 214 303 3.1E-7 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 Pfam PF00581 Rhodanese-like domain 335 426 1.9E-5 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SUPERFAMILY SSF52821 308 434 9.82E-28 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SUPERFAMILY SSF52821 583 685 2.49E-18 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03015 95e2a1b08a01531b9758be633adb23e0 735 SUPERFAMILY SSF52821 208 323 2.62E-23 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 Gene3D G3DSA:3.60.15.10 510 810 1.1E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 125 789 6.2E-86 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 Pfam PF03772 Competence protein 209 490 3.1E-55 T 28-03-2018 IPR004477 ComEC/Rec2-related protein AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 SUPERFAMILY SSF56281 516 813 1.49E-43 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 Pfam PF13567 Domain of unknown function (DUF4131) 9 167 2.6E-14 T 28-03-2018 IPR025405 Domain of unknown function DUF4131 AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 SMART SM00849 529 760 9.1E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 421 1.3E-19 T 28-03-2018 IPR004477 ComEC/Rec2-related protein AL504_RS00420 e41c4b2c1342c64954e7c56bf9d25556 816 Pfam PF00753 Metallo-beta-lactamase superfamily 528 749 3.1E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Gene3D G3DSA:3.10.20.310 34 104 2.5E-12 T 28-03-2018 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Gene3D G3DSA:3.10.20.310 188 279 3.9E-23 T 28-03-2018 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 17 781 25.579 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 37 781 1.6E-269 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Gene3D G3DSA:2.40.160.50 392 781 2.0E-79 T 28-03-2018 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Gene3D G3DSA:3.10.20.310 105 187 3.1E-12 T 28-03-2018 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Gene3D G3DSA:3.10.20.310 280 359 2.3E-14 T 28-03-2018 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Pfam PF07244 Surface antigen variable number repeat 189 276 5.8E-19 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Pfam PF07244 Surface antigen variable number repeat 360 434 9.3E-15 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Pfam PF07244 Surface antigen variable number repeat 105 185 4.2E-10 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Pfam PF07244 Surface antigen variable number repeat 279 356 2.1E-12 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Pfam PF07244 Surface antigen variable number repeat 38 103 2.4E-6 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 PIRSF PIRSF006076 3 781 9.8E-250 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL504_RS06160 ed1122a2e5cd5f3621bc22bfc7d9a0dd 781 Pfam PF01103 Surface antigen 461 781 9.5E-68 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 92 1.3E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 SUPERFAMILY SSF48498 112 231 2.79E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 Gene3D G3DSA:1.10.357.10 115 233 9.4E-14 T 28-03-2018 AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 SUPERFAMILY SSF46689 33 118 1.75E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 Gene3D G3DSA:1.10.260.40 68 114 2.8E-8 T 28-03-2018 AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 Gene3D G3DSA:1.10.10.60 20 67 4.0E-12 T 28-03-2018 AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 67 90 6.9E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS02900 ed5d79d1988a0a1f245a83fd9c2ead6e 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 59 6.9E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12470 85889669e86ef372676f9f0646874e62 227 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 225 1.3E-55 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL504_RS12470 85889669e86ef372676f9f0646874e62 227 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 225 6.4E-60 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL504_RS12470 85889669e86ef372676f9f0646874e62 227 Gene3D G3DSA:3.90.550.10 1 227 1.8E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS12470 85889669e86ef372676f9f0646874e62 227 SUPERFAMILY SSF53448 5 227 6.08E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS12470 85889669e86ef372676f9f0646874e62 227 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL504_RS12470 85889669e86ef372676f9f0646874e62 227 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 227 41.045 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Hamap MF_00123 Arginine--tRNA ligase [argS]. 11 561 25.352 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Gene3D G3DSA:3.40.50.620 118 327 3.8E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 311 332 4.4E-23 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 4.4E-23 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 4.4E-23 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 4.4E-23 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 SUPERFAMILY SSF55190 7 113 1.83E-20 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Gene3D G3DSA:3.40.50.620 328 424 4.2E-13 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Gene3D G3DSA:1.10.730.10 425 561 1.6E-46 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 92 4.2E-23 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 SMART SM01016 7 93 9.2E-36 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Gene3D G3DSA:3.30.1360.70 1 117 2.3E-29 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 SUPERFAMILY SSF47323 439 561 1.24E-36 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 SMART SM00836 444 561 6.2E-52 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 SUPERFAMILY SSF52374 116 454 1.05E-83 T 28-03-2018 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Pfam PF00750 tRNA synthetases class I (R) 113 406 1.9E-21 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 Pfam PF05746 DALR anticodon binding domain 444 561 2.1E-34 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL504_RS18615 c4432711623c9f211325dca13d3d3aab 561 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 561 1.3E-126 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL504_RS16280 c93e56bfb8c6dd23c0f82bab08cd3e44 338 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 1.1E-33 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS16280 c93e56bfb8c6dd23c0f82bab08cd3e44 338 Gene3D G3DSA:3.40.190.10 24 136 3.9E-17 T 28-03-2018 AL504_RS16280 c93e56bfb8c6dd23c0f82bab08cd3e44 338 SMART SM00062 34 263 5.8E-47 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS16280 c93e56bfb8c6dd23c0f82bab08cd3e44 338 Gene3D G3DSA:3.40.190.10 137 265 2.7E-18 T 28-03-2018 AL504_RS16280 c93e56bfb8c6dd23c0f82bab08cd3e44 338 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS16280 c93e56bfb8c6dd23c0f82bab08cd3e44 338 SUPERFAMILY SSF53850 25 254 1.01E-49 T 28-03-2018 AL504_RS05795 943bcaa1db73f97a3da459c7a13d25f0 550 SUPERFAMILY SSF103515 269 550 1.96E-61 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS05795 943bcaa1db73f97a3da459c7a13d25f0 550 SUPERFAMILY SSF103515 213 240 1.96E-61 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS05795 943bcaa1db73f97a3da459c7a13d25f0 550 SMART SM00869 273 540 4.2E-46 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS05795 943bcaa1db73f97a3da459c7a13d25f0 550 Pfam PF03797 Autotransporter beta-domain 276 529 7.6E-59 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS05795 943bcaa1db73f97a3da459c7a13d25f0 550 Gene3D G3DSA:2.40.128.130 204 550 1.3E-51 T 28-03-2018 AL504_RS05795 943bcaa1db73f97a3da459c7a13d25f0 550 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 61 550 7.5E-36 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS15140 2e466ad3a9f1383da513d4e6e8e4e4e5 272 SUPERFAMILY SSF88713 2 265 1.09E-52 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS15140 2e466ad3a9f1383da513d4e6e8e4e4e5 272 Gene3D G3DSA:3.20.20.370 1 268 1.2E-55 T 28-03-2018 AL504_RS15140 2e466ad3a9f1383da513d4e6e8e4e4e5 272 Pfam PF04794 YdjC-like protein 4 258 9.7E-43 T 28-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like AL504_RS26090 6f5ffeff5a99333102b52cc5b3e60e61 250 SUPERFAMILY SSF52540 10 244 1.66E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26090 6f5ffeff5a99333102b52cc5b3e60e61 250 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS26090 6f5ffeff5a99333102b52cc5b3e60e61 250 PIRSF PIRSF039085 7 250 4.6E-103 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS26090 6f5ffeff5a99333102b52cc5b3e60e61 250 Gene3D G3DSA:3.40.50.300 7 250 2.1E-74 T 28-03-2018 AL504_RS26090 6f5ffeff5a99333102b52cc5b3e60e61 250 SMART SM00382 35 222 4.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26090 6f5ffeff5a99333102b52cc5b3e60e61 250 Pfam PF00005 ABC transporter 26 174 2.1E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03875 52cf427a4a4dc4230b83e078038f5e11 332 PIRSF PIRSF001439 1 322 2.5E-58 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS03875 52cf427a4a4dc4230b83e078038f5e11 332 Gene3D G3DSA:3.40.50.720 136 294 1.2E-22 T 28-03-2018 AL504_RS03875 52cf427a4a4dc4230b83e078038f5e11 332 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 83 312 6.3E-43 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS03875 52cf427a4a4dc4230b83e078038f5e11 332 Gene3D G3DSA:3.30.1780.10 3 135 3.6E-25 T 28-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL504_RS03875 52cf427a4a4dc4230b83e078038f5e11 332 SUPERFAMILY SSF51735 4 321 1.82E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19700 b9ef4e8f1291d147fc526360a3a0a969 233 Pfam PF00297 Ribosomal protein L3 82 199 2.3E-18 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19700 b9ef4e8f1291d147fc526360a3a0a969 233 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 18 222 3.5E-84 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19700 b9ef4e8f1291d147fc526360a3a0a969 233 Gene3D G3DSA:4.10.960.10 63 183 4.5E-29 T 28-03-2018 AL504_RS19700 b9ef4e8f1291d147fc526360a3a0a969 233 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 16 225 38.32 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19700 b9ef4e8f1291d147fc526360a3a0a969 233 SUPERFAMILY SSF50447 12 230 1.41E-78 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS19700 b9ef4e8f1291d147fc526360a3a0a969 233 ProSitePatterns PS00474 Ribosomal protein L3 signature. 119 142 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 6.8E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 SUPERFAMILY SSF53850 90 283 3.43E-36 T 28-03-2018 AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 Gene3D G3DSA:3.40.190.10 174 261 1.2E-21 T 28-03-2018 AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 Gene3D G3DSA:1.10.10.10 2 83 3.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 5 283 3.2E-127 T 28-03-2018 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 Gene3D G3DSA:3.40.190.10 87 173 4.5E-18 T 28-03-2018 AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 Pfam PF03466 LysR substrate binding domain 88 283 8.5E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 SUPERFAMILY SSF46785 6 103 1.25E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10965 282174cdc02c5af080256f98dc52984f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 Gene3D G3DSA:1.20.1560.10 1 302 6.0E-24 T 28-03-2018 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 Gene3D G3DSA:3.40.50.300 321 542 2.9E-38 T 28-03-2018 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 SMART SM00382 352 531 3.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 Pfam PF00005 ABC transporter 345 480 1.5E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 SUPERFAMILY SSF90123 5 298 1.44E-26 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 Pfam PF00664 ABC transporter transmembrane region 12 155 8.8E-7 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 3 534 6.1E-134 T 28-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 AL504_RS03265 68055a181a2e6770b8cd57bc8b852da6 569 SUPERFAMILY SSF52540 324 531 5.42E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16245 43486a0dc41e1b9c4dcba96b2514af4f 391 Pfam PF13458 Periplasmic binding protein 27 364 1.4E-64 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS16245 43486a0dc41e1b9c4dcba96b2514af4f 391 SUPERFAMILY SSF53822 27 388 5.05E-75 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS16245 43486a0dc41e1b9c4dcba96b2514af4f 391 Gene3D G3DSA:3.40.50.2300 197 355 4.2E-23 T 28-03-2018 AL504_RS16245 43486a0dc41e1b9c4dcba96b2514af4f 391 Gene3D G3DSA:3.40.50.2300 24 196 5.4E-22 T 28-03-2018 AL504_RS14280 86b91b88b0284ab37f0188776af67381 132 SUPERFAMILY SSF50249 8 119 4.97E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS14280 86b91b88b0284ab37f0188776af67381 132 Gene3D G3DSA:2.40.50.140 57 120 9.3E-15 T 28-03-2018 AL504_RS14280 86b91b88b0284ab37f0188776af67381 132 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 17 52 9.2E-12 T 28-03-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AL504_RS14280 86b91b88b0284ab37f0188776af67381 132 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 54 113 1.9E-18 T 28-03-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AL504_RS00430 c7cc7650b06bd59360aaaf1ecd3817a3 438 Gene3D G3DSA:1.20.1250.20 10 229 5.2E-23 T 28-03-2018 AL504_RS00430 c7cc7650b06bd59360aaaf1ecd3817a3 438 Gene3D G3DSA:1.20.1250.20 231 432 1.4E-17 T 28-03-2018 AL504_RS00430 c7cc7650b06bd59360aaaf1ecd3817a3 438 Pfam PF00083 Sugar (and other) transporter 18 228 6.9E-22 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS00430 c7cc7650b06bd59360aaaf1ecd3817a3 438 SUPERFAMILY SSF103473 8 428 5.62E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS16845 3de17a5706ecc50d56c0e8022cb54bb2 336 SMART SM00382 53 245 2.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16845 3de17a5706ecc50d56c0e8022cb54bb2 336 Pfam PF00005 ABC transporter 45 196 5.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16845 3de17a5706ecc50d56c0e8022cb54bb2 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS16845 3de17a5706ecc50d56c0e8022cb54bb2 336 SUPERFAMILY SSF52540 9 267 4.08E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16845 3de17a5706ecc50d56c0e8022cb54bb2 336 Gene3D G3DSA:3.40.50.300 5 336 2.4E-80 T 28-03-2018 AL504_RS16845 3de17a5706ecc50d56c0e8022cb54bb2 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 311 3.3E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS16845 3de17a5706ecc50d56c0e8022cb54bb2 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 245 331 3.8E-29 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS10480 740673a0ca42e785ac583606ee099b12 372 Pfam PF03054 tRNA methyl transferase 10 371 1.8E-129 T 28-03-2018 AL504_RS10480 740673a0ca42e785ac583606ee099b12 372 Gene3D G3DSA:2.30.30.280 220 292 8.8E-26 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AL504_RS10480 740673a0ca42e785ac583606ee099b12 372 SUPERFAMILY SSF52402 7 251 1.04E-57 T 28-03-2018 AL504_RS10480 740673a0ca42e785ac583606ee099b12 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 9 372 38.806 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AL504_RS10480 740673a0ca42e785ac583606ee099b12 372 Gene3D G3DSA:3.40.50.620 2 219 3.2E-61 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS10480 740673a0ca42e785ac583606ee099b12 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 10 371 7.5E-128 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AL504_RS10480 740673a0ca42e785ac583606ee099b12 372 Gene3D G3DSA:2.40.30.10 294 372 7.9E-24 T 28-03-2018 AL504_RS27160 422368166414d0d98c33bc2fd188dc93 302 SUPERFAMILY SSF46785 8 114 5.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27160 422368166414d0d98c33bc2fd188dc93 302 Pfam PF03466 LysR substrate binding domain 91 295 3.6E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS27160 422368166414d0d98c33bc2fd188dc93 302 Gene3D G3DSA:1.10.10.10 1 87 2.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27160 422368166414d0d98c33bc2fd188dc93 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27160 422368166414d0d98c33bc2fd188dc93 302 Gene3D G3DSA:3.40.190.10 92 178 1.8E-11 T 28-03-2018 AL504_RS27160 422368166414d0d98c33bc2fd188dc93 302 SUPERFAMILY SSF53850 92 298 2.9E-41 T 28-03-2018 AL504_RS27160 422368166414d0d98c33bc2fd188dc93 302 Gene3D G3DSA:3.40.190.10 179 267 1.8E-27 T 28-03-2018 AL504_RS30120 b91ef5fac8e323351a02e23c002e3a56 195 SUPERFAMILY SSF55811 13 180 3.38E-50 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS30120 b91ef5fac8e323351a02e23c002e3a56 195 Pfam PF00293 NUDIX domain 49 162 1.5E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS30120 b91ef5fac8e323351a02e23c002e3a56 195 Gene3D G3DSA:3.90.79.10 3 188 1.4E-43 T 28-03-2018 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 386 3.3E-101 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 293 306 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 3.8E-18 T 28-03-2018 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 3.8E-18 T 28-03-2018 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.8E-18 T 28-03-2018 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 3.8E-18 T 28-03-2018 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 Pfam PF01494 FAD binding domain 4 338 9.0E-20 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 Gene3D G3DSA:3.50.50.60 1 316 2.6E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 SUPERFAMILY SSF51905 1 169 5.74E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17100 3a7a146b91060ec3a088b1c6a9f9de63 389 SUPERFAMILY SSF51905 275 385 5.74E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17245 612a3173dd6ed38379d4f13783e05b4e 165 Pfam PF03061 Thioesterase superfamily 24 97 2.8E-17 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS17245 612a3173dd6ed38379d4f13783e05b4e 165 SUPERFAMILY SSF54637 8 156 9.86E-45 T 28-03-2018 IPR029069 HotDog domain AL504_RS17245 612a3173dd6ed38379d4f13783e05b4e 165 Gene3D G3DSA:3.10.129.10 2 154 2.2E-47 T 28-03-2018 AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 SUPERFAMILY SSF54523 47 151 5.23E-36 T 28-03-2018 AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 Pfam PF08334 Type II secretion system (T2SS), protein G 43 151 9.9E-40 T 28-03-2018 IPR013545 Type II secretion system protein G AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 40 1.8E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 Gene3D G3DSA:3.30.700.10 34 151 8.0E-28 T 28-03-2018 AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 19 152 6.3E-54 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 40 1.7E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 PRINTS PR00813 Bacterial general secretion pathway protein G signature 20 45 7.0E-17 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL504_RS04135 e73508a1bb3fc4a44a5be7df20b75cac 153 PRINTS PR00813 Bacterial general secretion pathway protein G signature 56 74 7.0E-17 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL504_RS15375 561dd19ae1a3e8b636db53600f9a48a5 118 SUPERFAMILY SSF48452 6 113 2.06E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15375 561dd19ae1a3e8b636db53600f9a48a5 118 Gene3D G3DSA:1.25.40.10 1 117 3.8E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS05935 0a005a2150467732e949faff05e24f63 663 SUPERFAMILY SSF56935 21 662 5.27E-120 T 28-03-2018 AL504_RS05935 0a005a2150467732e949faff05e24f63 663 Gene3D G3DSA:2.40.170.20 164 662 6.7E-69 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS05935 0a005a2150467732e949faff05e24f63 663 Gene3D G3DSA:2.170.130.10 22 163 8.1E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS05935 0a005a2150467732e949faff05e24f63 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 151 1.6E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS05935 0a005a2150467732e949faff05e24f63 663 Pfam PF00593 TonB dependent receptor 240 662 7.0E-43 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 5.6E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 SUPERFAMILY SSF54909 66 147 4.29E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.1E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.1E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.1E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 SMART SM00344 3 112 5.2E-42 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 Gene3D G3DSA:1.10.10.10 3 54 2.3E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 SUPERFAMILY SSF46785 2 63 3.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 3.2E-24 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS19025 7492462451428d9b5eb384286c7b2d39 156 Gene3D G3DSA:3.30.70.920 56 149 1.3E-25 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 91 111 7.4E-14 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 277 299 7.4E-14 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 495 516 7.4E-14 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 431 453 7.4E-14 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 65 89 7.4E-14 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 164 185 9.0E-66 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 89 114 9.0E-66 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 258 9.0E-66 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 327 339 9.0E-66 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 432 451 9.0E-66 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 117 137 9.0E-66 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 259 285 9.0E-66 T 28-03-2018 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 Pfam PF00361 Proton-conducting membrane transporter 140 434 6.0E-86 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 71 128 2.0E-25 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12515 f44197ab5253523e3f382d270e9e74d1 680 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 675 8.1E-242 T 28-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS07330 1a87e8d197a003b68e10fb30f949eb27 442 Gene3D G3DSA:1.20.1250.20 226 426 4.8E-19 T 28-03-2018 AL504_RS07330 1a87e8d197a003b68e10fb30f949eb27 442 SUPERFAMILY SSF103473 20 425 3.4E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS07330 1a87e8d197a003b68e10fb30f949eb27 442 Pfam PF00083 Sugar (and other) transporter 21 419 8.0E-22 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS07330 1a87e8d197a003b68e10fb30f949eb27 442 Gene3D G3DSA:1.20.1250.20 11 225 1.2E-21 T 28-03-2018 AL504_RS30265 c1845818396378d0cca5a3fd62b41ff8 488 Gene3D G3DSA:3.40.309.10 260 460 1.9E-72 T 28-03-2018 AL504_RS30265 c1845818396378d0cca5a3fd62b41ff8 488 Pfam PF00171 Aldehyde dehydrogenase family 15 474 1.2E-169 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS30265 c1845818396378d0cca5a3fd62b41ff8 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS30265 c1845818396378d0cca5a3fd62b41ff8 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS30265 c1845818396378d0cca5a3fd62b41ff8 488 SUPERFAMILY SSF53720 3 480 8.51E-164 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS30265 c1845818396378d0cca5a3fd62b41ff8 488 Gene3D G3DSA:3.40.605.10 1 259 2.9E-95 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS30265 c1845818396378d0cca5a3fd62b41ff8 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 3 487 6.5E-221 T 28-03-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 AL504_RS11210 c20fb30ecb50b31701ba3678f5ceac0c 168 SUPERFAMILY SSF117916 8 101 9.16E-27 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AL504_RS11210 c20fb30ecb50b31701ba3678f5ceac0c 168 Gene3D G3DSA:3.30.300.130 6 103 9.4E-24 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AL504_RS11210 c20fb30ecb50b31701ba3678f5ceac0c 168 Pfam PF01883 Iron-sulfur cluster assembly protein 10 80 4.3E-14 T 28-03-2018 IPR002744 MIP18 family-like AL504_RS11210 c20fb30ecb50b31701ba3678f5ceac0c 168 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 19 167 1.6E-60 T 28-03-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 Gene3D G3DSA:3.20.20.70 17 343 4.2E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 Pfam PF06463 Molybdenum Cofactor Synthesis C 202 327 1.4E-27 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 Pfam PF13353 4Fe-4S single cluster domain 36 124 1.1E-5 T 28-03-2018 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 Pfam PF04055 Radical SAM superfamily 34 195 7.0E-24 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 21 343 35.889 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 21 343 2.8E-100 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 36 47 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 SMART SM00729 30 232 7.0E-4 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS02705 1f791be65fbc276e200c5292cace507a 343 SUPERFAMILY SSF102114 20 307 3.53E-63 T 28-03-2018 AL504_RS12490 1150ef88feca07814df4b0cc98bc5437 579 Gene3D G3DSA:2.40.160.50 176 579 6.7E-35 T 28-03-2018 AL504_RS12490 1150ef88feca07814df4b0cc98bc5437 579 Gene3D G3DSA:3.10.20.310 70 145 2.2E-12 T 28-03-2018 AL504_RS12490 1150ef88feca07814df4b0cc98bc5437 579 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 213 525 9.1E-15 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AL504_RS12490 1150ef88feca07814df4b0cc98bc5437 579 Pfam PF08479 POTRA domain, ShlB-type 69 145 1.4E-13 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AL504_RS30255 0848c85e7805bf4ffaf241b7d28b09d6 249 Gene3D G3DSA:3.90.850.10 30 248 1.4E-74 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS30255 0848c85e7805bf4ffaf241b7d28b09d6 249 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 48 244 4.5E-62 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS30255 0848c85e7805bf4ffaf241b7d28b09d6 249 Gene3D G3DSA:2.30.30.370 1 29 1.1E-18 T 28-03-2018 AL504_RS30255 0848c85e7805bf4ffaf241b7d28b09d6 249 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 2.5E-115 T 28-03-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 AL504_RS30255 0848c85e7805bf4ffaf241b7d28b09d6 249 SUPERFAMILY SSF56529 36 245 4.19E-75 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 SUPERFAMILY SSF51126 291 459 4.39E-30 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 SUPERFAMILY SSF51126 160 260 4.39E-30 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3873 3983 2.3E-36 T 28-03-2018 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 Gene3D G3DSA:2.160.20.10 2475 2653 0.037 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 Gene3D G3DSA:2.160.20.10 724 1048 3.0E-9 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 Gene3D G3DSA:2.160.20.10 2272 2474 1.2E-5 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 Gene3D G3DSA:2.160.20.10 140 478 4.8E-34 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 SMART SM00912 146 256 2.9E-25 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 176 250 2.3E-20 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 Pfam PF05860 haemagglutination activity domain 155 255 1.3E-20 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS04095 00e1876d4c9b8b160ec931883344b7e2 4096 Gene3D G3DSA:2.160.20.10 1102 1550 0.19 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 Gene3D G3DSA:3.40.47.10 269 390 1.7E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 PIRSF PIRSF000429 1 393 2.1E-113 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 391 1.2E-125 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 SUPERFAMILY SSF53901 271 392 5.99E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 Gene3D G3DSA:3.40.47.10 2 268 6.0E-56 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.9E-88 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 SUPERFAMILY SSF53901 5 270 6.19E-79 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18695 a99aed6bc553900bda5a0eb4c90c14fc 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 3.1E-41 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS25350 f1cc50fdc0338f960c8206ab860617ec 444 SUPERFAMILY SSF63380 218 311 7.7E-17 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS25350 f1cc50fdc0338f960c8206ab860617ec 444 Gene3D G3DSA:3.40.50.80 314 444 3.3E-19 T 28-03-2018 AL504_RS25350 f1cc50fdc0338f960c8206ab860617ec 444 Pfam PF08022 FAD-binding domain 228 309 6.9E-8 T 28-03-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AL504_RS25350 f1cc50fdc0338f960c8206ab860617ec 444 SUPERFAMILY SSF52343 302 437 4.06E-20 T 28-03-2018 AL504_RS25350 f1cc50fdc0338f960c8206ab860617ec 444 Pfam PF01794 Ferric reductase like transmembrane component 45 172 5.4E-17 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain AL504_RS25350 f1cc50fdc0338f960c8206ab860617ec 444 Gene3D G3DSA:2.40.30.10 212 310 1.9E-15 T 28-03-2018 AL504_RS13235 794a25dfbfc3d3ba7a6c290bf8d6b009 423 SUPERFAMILY SSF51419 52 283 2.06E-28 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS13235 794a25dfbfc3d3ba7a6c290bf8d6b009 423 Pfam PF01168 Alanine racemase, N-terminal domain 53 251 4.4E-10 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS13235 794a25dfbfc3d3ba7a6c290bf8d6b009 423 SMART SM01119 310 410 3.8E-37 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL504_RS13235 794a25dfbfc3d3ba7a6c290bf8d6b009 423 Pfam PF14031 Putative serine dehydratase domain 310 409 6.5E-17 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL504_RS13235 794a25dfbfc3d3ba7a6c290bf8d6b009 423 Gene3D G3DSA:3.20.20.10 51 384 1.9E-35 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS12070 86a226baef1df16503ebfe9bdcc9b215 428 Gene3D G3DSA:1.20.1250.20 222 424 0.001 T 28-03-2018 AL504_RS12070 86a226baef1df16503ebfe9bdcc9b215 428 SUPERFAMILY SSF103473 24 420 1.7E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS12070 86a226baef1df16503ebfe9bdcc9b215 428 Pfam PF07690 Major Facilitator Superfamily 26 335 4.2E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS12070 86a226baef1df16503ebfe9bdcc9b215 428 Gene3D G3DSA:1.20.1250.20 21 215 4.8E-16 T 28-03-2018 AL504_RS18395 9775f495e8c73807a8a317b3ebe60185 462 PIRSF PIRSF002746 4 460 9.9E-145 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL504_RS18395 9775f495e8c73807a8a317b3ebe60185 462 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 458 1.1E-118 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL504_RS18395 9775f495e8c73807a8a317b3ebe60185 462 Pfam PF02447 GntP family permease 9 457 8.1E-124 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL504_RS22025 95079d419fa0755f0b8ceb34d4fdf96f 255 Gene3D G3DSA:2.60.120.620 1 246 1.2E-45 T 28-03-2018 AL504_RS22025 95079d419fa0755f0b8ceb34d4fdf96f 255 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 14 224 1.3E-33 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase AL504_RS22025 95079d419fa0755f0b8ceb34d4fdf96f 255 SUPERFAMILY SSF51197 2 243 5.95E-60 T 28-03-2018 AL504_RS27485 a127e7c2d120004183dcb700054ccfac 167 Pfam PF08281 Sigma-70, region 4 110 161 4.9E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27485 a127e7c2d120004183dcb700054ccfac 167 Pfam PF04542 Sigma-70 region 2 13 78 7.1E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27485 a127e7c2d120004183dcb700054ccfac 167 Gene3D G3DSA:1.10.10.10 76 162 5.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27485 a127e7c2d120004183dcb700054ccfac 167 Gene3D G3DSA:1.10.1740.10 3 75 6.1E-15 T 28-03-2018 AL504_RS27485 a127e7c2d120004183dcb700054ccfac 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 161 5.9E-22 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27485 a127e7c2d120004183dcb700054ccfac 167 SUPERFAMILY SSF88946 10 95 2.75E-15 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27485 a127e7c2d120004183dcb700054ccfac 167 SUPERFAMILY SSF88659 90 161 7.2E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS19355 0d3ec3cbfd4139664bf0f9d1a3a4699b 123 Gene3D G3DSA:3.30.230.10 1 123 3.2E-24 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS19355 0d3ec3cbfd4139664bf0f9d1a3a4699b 123 SUPERFAMILY SSF54211 5 108 1.29E-18 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS19355 0d3ec3cbfd4139664bf0f9d1a3a4699b 123 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 44 97 2.0E-7 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL504_RS19355 0d3ec3cbfd4139664bf0f9d1a3a4699b 123 Pfam PF00825 Ribonuclease P 6 111 7.2E-20 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL504_RS19355 0d3ec3cbfd4139664bf0f9d1a3a4699b 123 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 61 75 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AL504_RS19355 0d3ec3cbfd4139664bf0f9d1a3a4699b 123 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 108 7.4E-11 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL504_RS19355 0d3ec3cbfd4139664bf0f9d1a3a4699b 123 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 120 13.892 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 SUPERFAMILY SSF46689 6 79 3.18E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 Gene3D G3DSA:1.10.260.40 38 74 8.4E-12 T 28-03-2018 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 SUPERFAMILY SSF48498 81 197 2.71E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 Gene3D G3DSA:1.10.357.10 75 206 1.0E-7 T 28-03-2018 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.9E-17 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 196 1.5E-8 T 28-03-2018 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 Gene3D G3DSA:1.10.10.60 2 37 1.4E-17 T 28-03-2018 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.8E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS09295 1bcf8e80ebc3faa1b229982fcae58771 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.8E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS11300 3f3889ce287bc72f00a2bf594c5c1080 299 SUPERFAMILY SSF161098 14 266 4.71E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS11300 3f3889ce287bc72f00a2bf594c5c1080 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 266 6.4E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS11300 3f3889ce287bc72f00a2bf594c5c1080 299 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 19 273 7.1E-101 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AL504_RS11300 3f3889ce287bc72f00a2bf594c5c1080 299 Gene3D G3DSA:1.10.3720.10 18 280 1.4E-41 T 28-03-2018 AL504_RS11300 3f3889ce287bc72f00a2bf594c5c1080 299 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 16 275 4.6E-129 T 28-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AL504_RS28870 64e11ab683a8e5c1a9dd00f0cbf837f6 282 Gene3D G3DSA:3.30.450.40 97 275 4.0E-33 T 28-03-2018 IPR029016 GAF domain-like AL504_RS28870 64e11ab683a8e5c1a9dd00f0cbf837f6 282 Pfam PF01614 Bacterial transcriptional regulator 147 269 7.3E-12 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS28870 64e11ab683a8e5c1a9dd00f0cbf837f6 282 SUPERFAMILY SSF46785 31 98 4.85E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28870 64e11ab683a8e5c1a9dd00f0cbf837f6 282 SUPERFAMILY SSF55781 93 274 2.94E-32 T 28-03-2018 IPR029016 GAF domain-like AL504_RS28870 64e11ab683a8e5c1a9dd00f0cbf837f6 282 Gene3D G3DSA:1.10.10.10 23 96 1.3E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28870 64e11ab683a8e5c1a9dd00f0cbf837f6 282 SMART SM00346 29 118 8.9E-16 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS28870 64e11ab683a8e5c1a9dd00f0cbf837f6 282 Pfam PF09339 IclR helix-turn-helix domain 31 81 4.2E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS27270 6b5862553914284666b7f2201a49e885 263 SUPERFAMILY SSF53850 11 257 2.38E-48 T 28-03-2018 AL504_RS27270 6b5862553914284666b7f2201a49e885 263 Gene3D G3DSA:3.40.190.10 27 135 5.6E-30 T 28-03-2018 AL504_RS27270 6b5862553914284666b7f2201a49e885 263 Gene3D G3DSA:3.40.190.10 136 217 2.4E-13 T 28-03-2018 AL504_RS27270 6b5862553914284666b7f2201a49e885 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 255 8.1E-38 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS27270 6b5862553914284666b7f2201a49e885 263 SMART SM00062 37 258 1.6E-39 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 SMART SM01018 676 763 8.9E-42 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 SUPERFAMILY SSF52242 772 927 1.96E-42 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Gene3D G3DSA:3.40.50.280 773 928 5.2E-55 T 28-03-2018 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 SUPERFAMILY SSF82282 19 410 3.27E-114 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 PIRSF PIRSF000381 14 1229 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 SUPERFAMILY SSF56507 935 1256 3.79E-120 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Pfam PF02310 B12 binding domain 778 871 2.5E-18 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 SUPERFAMILY SSF51717 368 635 4.97E-87 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 TIGRFAM TIGR02082 metH: methionine synthase 24 1226 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Gene3D G3DSA:3.20.20.20 356 665 6.6E-70 T 28-03-2018 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 970 1241 9.9E-115 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Pfam PF02607 B12 binding domain 679 755 6.4E-25 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Gene3D G3DSA:3.20.20.330 12 352 2.5E-109 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 SUPERFAMILY SSF47644 671 762 2.62E-26 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Gene3D G3DSA:3.10.196.10 990 1257 4.9E-94 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Pfam PF02574 Homocysteine S-methyltransferase 28 336 3.6E-77 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Gene3D G3DSA:1.10.1240.10 666 763 8.1E-36 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS16410 eacb39fb9a6ccad70cf84de0fe1e8922 1257 Pfam PF00809 Pterin binding enzyme 371 609 6.1E-57 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL504_RS23225 fb1ad719c92a36a1d9eddac664cd0101 432 Pfam PF04209 homogentisate 1,2-dioxygenase 4 427 6.6E-201 T 28-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AL504_RS23225 fb1ad719c92a36a1d9eddac664cd0101 432 Gene3D G3DSA:2.60.120.10 274 397 1.3E-52 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23225 fb1ad719c92a36a1d9eddac664cd0101 432 Gene3D G3DSA:2.60.120.10 195 236 2.2E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23225 fb1ad719c92a36a1d9eddac664cd0101 432 SUPERFAMILY SSF51182 2 430 6.28E-174 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS23225 fb1ad719c92a36a1d9eddac664cd0101 432 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 2 427 3.4E-199 T 28-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AL504_RS23225 fb1ad719c92a36a1d9eddac664cd0101 432 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 4 429 70.685 T 28-03-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 SUPERFAMILY SSF56645 1 243 5.1E-76 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 2.0E-21 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 1.2E-22 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 Gene3D G3DSA:1.20.140.10 219 398 1.0E-42 T 28-03-2018 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 Gene3D G3DSA:1.10.540.10 1 121 2.0E-27 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 SUPERFAMILY SSF47203 231 398 9.49E-25 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 Gene3D G3DSA:2.40.110.10 122 218 4.3E-34 T 28-03-2018 AL504_RS01720 892f4b6d33d10923bfdb79c2f0c2d071 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 1.6E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS25150 246812c45c2fa287ae1ba8e0534720a0 287 Gene3D G3DSA:3.90.1140.10 37 280 2.9E-11 T 28-03-2018 AL504_RS04880 ea1c760a840cbc5d8d459870f5d9dd76 695 SUPERFAMILY SSF56935 48 695 3.3E-91 T 28-03-2018 AL504_RS04880 ea1c760a840cbc5d8d459870f5d9dd76 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 162 3.9E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS04880 ea1c760a840cbc5d8d459870f5d9dd76 695 Gene3D G3DSA:2.170.130.10 36 170 1.4E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS04880 ea1c760a840cbc5d8d459870f5d9dd76 695 Gene3D G3DSA:2.40.170.20 171 695 8.1E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS04880 ea1c760a840cbc5d8d459870f5d9dd76 695 Pfam PF00593 TonB dependent receptor 248 692 8.8E-44 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12640 f01b653af37c7649913d0f773dfd7b42 463 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 454 2.7E-121 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS12640 f01b653af37c7649913d0f773dfd7b42 463 Pfam PF02321 Outer membrane efflux protein 57 245 3.3E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS12640 f01b653af37c7649913d0f773dfd7b42 463 Pfam PF02321 Outer membrane efflux protein 272 453 5.5E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS12640 f01b653af37c7649913d0f773dfd7b42 463 SUPERFAMILY SSF56954 2 456 2.49E-107 T 28-03-2018 AL504_RS12640 f01b653af37c7649913d0f773dfd7b42 463 Gene3D G3DSA:1.20.1600.10 16 455 2.6E-96 T 28-03-2018 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 SUPERFAMILY SSF47203 286 461 1.0E-44 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 SUPERFAMILY SSF56645 37 267 5.37E-54 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 487 595 9.2E-24 T 28-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Gene3D G3DSA:1.20.140.10 303 468 3.8E-42 T 28-03-2018 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 266 1.8E-16 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 288 455 1.0E-27 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Gene3D G3DSA:2.40.110.10 160 270 2.4E-24 T 28-03-2018 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 155 9.0E-12 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 1.3E-9 T 28-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AL504_RS11320 638decb1a984142472787eed9fcb72ed 608 Gene3D G3DSA:1.10.540.10 31 159 3.1E-14 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS27870 2d9f2121782f00be3be9343bc43503c7 303 Gene3D G3DSA:3.40.190.10 178 265 2.1E-28 T 28-03-2018 AL504_RS27870 2d9f2121782f00be3be9343bc43503c7 303 Pfam PF03466 LysR substrate binding domain 89 294 3.2E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS27870 2d9f2121782f00be3be9343bc43503c7 303 SUPERFAMILY SSF53850 90 297 8.22E-47 T 28-03-2018 AL504_RS27870 2d9f2121782f00be3be9343bc43503c7 303 Gene3D G3DSA:1.10.10.10 1 87 3.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27870 2d9f2121782f00be3be9343bc43503c7 303 SUPERFAMILY SSF46785 2 112 4.99E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27870 2d9f2121782f00be3be9343bc43503c7 303 Gene3D G3DSA:3.40.190.10 89 177 3.0E-18 T 28-03-2018 AL504_RS27870 2d9f2121782f00be3be9343bc43503c7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.7E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 SMART SM01130 5 293 3.0E-85 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 SUPERFAMILY SSF51569 5 291 7.01E-82 T 28-03-2018 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 PIRSF PIRSF001365 2 302 1.1E-79 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 6.0E-13 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 6.0E-13 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 6.0E-13 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 Gene3D G3DSA:3.20.20.70 1 296 1.5E-77 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS15095 5efd485bc053442fd45cec0deac81d17 303 Pfam PF00701 Dihydrodipicolinate synthetase family 7 291 6.1E-56 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS18730 f9aae89e85860c9f2ef02e95bb7651d1 382 PIRSF PIRSF000429 1 377 3.2E-29 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS18730 f9aae89e85860c9f2ef02e95bb7651d1 382 SUPERFAMILY SSF53901 227 359 2.22E-20 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18730 f9aae89e85860c9f2ef02e95bb7651d1 382 SUPERFAMILY SSF53901 5 223 4.74E-29 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18730 f9aae89e85860c9f2ef02e95bb7651d1 382 Pfam PF00108 Thiolase, N-terminal domain 10 221 5.4E-10 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS18730 f9aae89e85860c9f2ef02e95bb7651d1 382 Gene3D G3DSA:3.40.47.10 4 218 4.3E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS18730 f9aae89e85860c9f2ef02e95bb7651d1 382 Gene3D G3DSA:3.40.47.10 219 359 1.1E-13 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS22665 285e5359c1d9e2ea6fd3b74be4ad409e 350 Gene3D G3DSA:1.50.10.100 33 345 1.2E-39 T 28-03-2018 AL504_RS22665 285e5359c1d9e2ea6fd3b74be4ad409e 350 Pfam PF05426 Alginate lyase 56 287 1.2E-45 T 28-03-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 AL504_RS22665 285e5359c1d9e2ea6fd3b74be4ad409e 350 SUPERFAMILY SSF48230 43 341 5.4E-37 T 28-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 Gene3D G3DSA:1.10.10.60 404 450 4.2E-9 T 28-03-2018 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 SUPERFAMILY SSF46689 411 453 1.39E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 Gene3D G3DSA:1.10.8.60 314 386 2.4E-5 T 28-03-2018 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 SUPERFAMILY SSF52540 139 366 2.17E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 Pfam PF00158 Sigma-54 interaction domain 140 305 6.0E-63 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 Pfam PF02954 Bacterial regulatory protein, Fis family 412 451 6.2E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 SMART SM00382 159 302 5.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28660 a0bbb6b2feda6db8320445fbd4fb2c58 468 Gene3D G3DSA:3.40.50.300 134 311 8.1E-25 T 28-03-2018 AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 Gene3D G3DSA:3.20.20.140 10 356 1.3E-51 T 28-03-2018 AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 Pfam PF01979 Amidohydrolase family 21 325 4.2E-21 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 Hamap MF_00219 Dihydroorotase [pyrC]. 12 358 43.963 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 14 356 1.9E-140 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 ProSitePatterns PS00483 Dihydroorotase signature 2. 260 271 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 PIRSF PIRSF001237 10 359 5.1E-135 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 SUPERFAMILY SSF51556 12 357 1.64E-142 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS14810 a2b308ad5e6c5b872a20212b735f96bf 359 ProSitePatterns PS00482 Dihydroorotase signature 1. 21 29 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL504_RS19085 4d8fe6e5695a696189e55c62bb161aba 343 Gene3D G3DSA:3.40.50.2300 40 154 1.3E-22 T 28-03-2018 AL504_RS19085 4d8fe6e5695a696189e55c62bb161aba 343 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 57 285 3.3E-39 T 28-03-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 AL504_RS19085 4d8fe6e5695a696189e55c62bb161aba 343 SUPERFAMILY SSF53822 54 240 2.35E-6 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS19085 4d8fe6e5695a696189e55c62bb161aba 343 Gene3D G3DSA:3.40.50.2300 155 334 5.1E-38 T 28-03-2018 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 SUPERFAMILY SSF54849 137 203 7.33E-25 T 28-03-2018 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 PRINTS PR00298 60kDa chaperonin signature 83 110 5.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 PRINTS PR00298 60kDa chaperonin signature 27 53 5.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 PRINTS PR00298 60kDa chaperonin signature 268 291 5.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 PRINTS PR00298 60kDa chaperonin signature 350 375 5.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 PRINTS PR00298 60kDa chaperonin signature 398 419 5.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 Gene3D G3DSA:3.50.7.10 186 373 3.4E-96 T 28-03-2018 IPR027409 GroEL-like apical domain AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 SUPERFAMILY SSF48592 406 521 3.25E-76 T 28-03-2018 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 SUPERFAMILY SSF48592 7 134 3.25E-76 T 28-03-2018 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 SUPERFAMILY SSF52029 184 376 1.09E-82 T 28-03-2018 IPR027409 GroEL-like apical domain AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 4.2E-98 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.5E-255 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.517 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 Gene3D G3DSA:1.10.560.10 1 185 1.4E-41 T 28-03-2018 IPR027413 GroEL-like equatorial domain AL504_RS23545 02eca65ab77eb72a459cd42cd401ad67 546 Gene3D G3DSA:1.10.560.10 374 516 3.0E-26 T 28-03-2018 IPR027413 GroEL-like equatorial domain AL504_RS19190 0c73e7dc269a308d245472029f072830 293 Pfam PF03466 LysR substrate binding domain 88 290 7.0E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS19190 0c73e7dc269a308d245472029f072830 293 SUPERFAMILY SSF46785 1 78 1.43E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19190 0c73e7dc269a308d245472029f072830 293 Gene3D G3DSA:3.40.190.10 87 174 1.9E-12 T 28-03-2018 AL504_RS19190 0c73e7dc269a308d245472029f072830 293 SUPERFAMILY SSF53850 83 290 1.36E-40 T 28-03-2018 AL504_RS19190 0c73e7dc269a308d245472029f072830 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19190 0c73e7dc269a308d245472029f072830 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19190 0c73e7dc269a308d245472029f072830 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19190 0c73e7dc269a308d245472029f072830 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 59 7.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19190 0c73e7dc269a308d245472029f072830 293 Gene3D G3DSA:1.10.10.10 1 81 1.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19190 0c73e7dc269a308d245472029f072830 293 Gene3D G3DSA:3.40.190.10 175 264 3.3E-13 T 28-03-2018 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 418 4.8E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SMART SM00387 463 569 9.3E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Gene3D G3DSA:3.30.450.20 90 225 1.4E-28 T 28-03-2018 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Pfam PF08448 PAS fold 114 223 8.4E-16 T 28-03-2018 IPR013656 PAS fold-4 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 566 4.0E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Gene3D G3DSA:3.30.565.10 422 580 1.9E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Pfam PF13188 PAS domain 233 283 0.011 T 28-03-2018 IPR000014 PAS domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 516 9.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 9.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 528 9.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 566 9.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SMART SM00091 105 172 1.1E-8 T 28-03-2018 IPR000014 PAS domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SMART SM00091 233 304 49.0 T 28-03-2018 IPR000014 PAS domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SMART SM00086 179 221 4.8E-4 T 28-03-2018 IPR001610 PAC motif AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 106 228 1.5E-24 T 28-03-2018 IPR000014 PAS domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Gene3D G3DSA:1.10.287.130 344 417 5.7E-7 T 28-03-2018 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SUPERFAMILY SSF47384 339 418 1.14E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SMART SM00388 351 421 3.9E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SUPERFAMILY SSF55785 218 327 5.93E-8 T 28-03-2018 IPR000014 PAS domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SUPERFAMILY SSF55785 94 219 5.23E-24 T 28-03-2018 IPR000014 PAS domain AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Gene3D G3DSA:3.30.450.20 226 280 3.4E-7 T 28-03-2018 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 Gene3D G3DSA:3.30.450.20 281 343 0.0071 T 28-03-2018 AL504_RS06660 bb919b9a804866dd1d8672cc6290a457 584 SUPERFAMILY SSF55874 410 569 8.29E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS14320 4151f1d8f41f858cf226422da2ac46e6 286 Pfam PF13452 N-terminal half of MaoC dehydratase 37 136 3.8E-11 T 28-03-2018 AL504_RS14320 4151f1d8f41f858cf226422da2ac46e6 286 Gene3D G3DSA:3.10.129.10 170 284 9.9E-21 T 28-03-2018 AL504_RS14320 4151f1d8f41f858cf226422da2ac46e6 286 Pfam PF01575 MaoC like domain 162 259 1.7E-22 T 28-03-2018 IPR002539 MaoC-like domain AL504_RS14320 4151f1d8f41f858cf226422da2ac46e6 286 SUPERFAMILY SSF54637 177 278 3.73E-25 T 28-03-2018 IPR029069 HotDog domain AL504_RS14320 4151f1d8f41f858cf226422da2ac46e6 286 Gene3D G3DSA:3.10.129.10 12 160 8.5E-37 T 28-03-2018 AL504_RS14320 4151f1d8f41f858cf226422da2ac46e6 286 SUPERFAMILY SSF54637 10 157 1.04E-44 T 28-03-2018 IPR029069 HotDog domain AL504_RS08695 273c2f90bebb455a38eedb037bd4a660 453 Pfam PF00263 Bacterial type II and III secretion system protein 236 392 3.3E-42 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL504_RS08695 273c2f90bebb455a38eedb037bd4a660 453 PRINTS PR00811 Bacterial general secretion pathway protein D signature 232 256 2.9E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS08695 273c2f90bebb455a38eedb037bd4a660 453 PRINTS PR00811 Bacterial general secretion pathway protein D signature 159 169 2.9E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS08695 273c2f90bebb455a38eedb037bd4a660 453 PRINTS PR00811 Bacterial general secretion pathway protein D signature 357 375 2.9E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS08695 273c2f90bebb455a38eedb037bd4a660 453 PRINTS PR00811 Bacterial general secretion pathway protein D signature 380 394 2.9E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS08695 273c2f90bebb455a38eedb037bd4a660 453 Pfam PF13629 Pilus formation protein N terminal region 25 91 1.9E-12 T 28-03-2018 IPR032789 Pilus formation protein, N-terminal AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82714 699 784 3.79E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 Gene3D G3DSA:1.20.1640.10 280 500 8.6E-49 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 Gene3D G3DSA:3.30.2090.10 698 784 1.9E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 Gene3D G3DSA:3.30.2090.10 181 265 2.6E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82714 182 264 2.35E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82693 136 181 7.06E-24 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82693 267 323 7.06E-24 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 Gene3D G3DSA:1.20.1640.10 785 1006 2.7E-41 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82693 40 134 1.57E-25 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 Pfam PF00873 AcrB/AcrD/AcrF family 3 1003 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82866 784 1009 1.57E-47 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 Gene3D G3DSA:3.30.70.1430 555 650 8.6E-12 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82866 296 490 1.7E-51 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 SUPERFAMILY SSF82693 553 648 1.15E-19 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 Gene3D G3DSA:3.30.70.1430 40 142 5.3E-29 T 28-03-2018 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS15200 f2ea79e67b7e90849cf6825c498b5581 1038 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.3E-78 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 SMART SM00271 4 62 3.5E-32 T 28-03-2018 IPR001623 DnaJ domain AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 SUPERFAMILY SSF49493 261 346 6.15E-24 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Gene3D G3DSA:2.60.260.20 196 256 2.9E-19 T 28-03-2018 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 5.6E-138 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Gene3D G3DSA:1.10.287.110 1 112 3.5E-37 T 28-03-2018 IPR001623 DnaJ domain AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 SUPERFAMILY SSF49493 117 140 2.09E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 SUPERFAMILY SSF49493 188 268 2.09E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 PRINTS PR00625 DnaJ domain signature 42 62 4.6E-33 T 28-03-2018 IPR001623 DnaJ domain AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 PRINTS PR00625 DnaJ domain signature 7 25 4.6E-33 T 28-03-2018 IPR001623 DnaJ domain AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 PRINTS PR00625 DnaJ domain signature 62 81 4.6E-33 T 28-03-2018 IPR001623 DnaJ domain AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 PRINTS PR00625 DnaJ domain signature 25 40 4.6E-33 T 28-03-2018 IPR001623 DnaJ domain AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Gene3D G3DSA:2.60.260.20 257 367 5.1E-29 T 28-03-2018 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Gene3D G3DSA:2.10.230.10 149 195 4.5E-13 T 28-03-2018 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Pfam PF00226 DnaJ domain 5 67 3.6E-28 T 28-03-2018 IPR001623 DnaJ domain AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Pfam PF00684 DnaJ central domain 149 209 7.8E-14 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 28-03-2018 IPR018253 DnaJ domain, conserved site AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Pfam PF01556 DnaJ C terminal domain 123 335 3.3E-41 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 41.954 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 SUPERFAMILY SSF57938 136 212 4.97E-22 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL504_RS13430 29b589528227941eb16e2fc34366dc6b 376 SUPERFAMILY SSF46565 1 112 6.8E-38 T 28-03-2018 IPR001623 DnaJ domain AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 SMART SM00387 354 468 8.2E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 66 172 1.3E-38 T 28-03-2018 IPR032408 Sensor histidine kinase RisS, periplasmic domain AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 Pfam PF00672 HAMP domain 202 248 9.4E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 SMART SM00388 253 312 1.8E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 467 6.2E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 SUPERFAMILY SSF47384 237 308 1.0E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 SUPERFAMILY SSF55874 311 469 7.6E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 Gene3D G3DSA:3.30.565.10 316 473 1.9E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 308 1.3E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 SMART SM00304 200 252 4.4E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 1.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 1.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 1.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 1.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 SUPERFAMILY SSF158472 202 249 1.12E-5 T 28-03-2018 AL504_RS12445 2ecac26a8caec5d21dc7b47ae05d3d60 479 Gene3D G3DSA:1.10.287.130 243 308 6.5E-10 T 28-03-2018 AL504_RS26885 8536fc176fbbdf444342dfbcf3a263ba 594 Pfam PF01740 STAS domain 457 560 3.9E-10 T 28-03-2018 IPR002645 STAS domain AL504_RS26885 8536fc176fbbdf444342dfbcf3a263ba 594 Gene3D G3DSA:3.30.750.24 415 573 1.0E-18 T 28-03-2018 IPR002645 STAS domain AL504_RS26885 8536fc176fbbdf444342dfbcf3a263ba 594 Pfam PF00916 Sulfate permease family 25 398 9.1E-82 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL504_RS26885 8536fc176fbbdf444342dfbcf3a263ba 594 SUPERFAMILY SSF52091 455 565 9.61E-14 T 28-03-2018 IPR002645 STAS domain AL504_RS03490 6719265a6323f803f6c742f053966372 255 SUPERFAMILY SSF161098 53 239 4.71E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03490 6719265a6323f803f6c742f053966372 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 249 1.2E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03490 6719265a6323f803f6c742f053966372 255 Gene3D G3DSA:1.10.3720.10 47 250 1.8E-28 T 28-03-2018 AL504_RS21435 1fd58f0ee47059a566ad023c6a5b1d53 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 131 205 7.0E-6 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS21435 1fd58f0ee47059a566ad023c6a5b1d53 215 Gene3D G3DSA:1.10.10.10 107 207 4.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21435 1fd58f0ee47059a566ad023c6a5b1d53 215 SMART SM00862 131 205 3.0E-5 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS21435 1fd58f0ee47059a566ad023c6a5b1d53 215 SUPERFAMILY SSF52242 17 108 5.02E-5 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL504_RS21435 1fd58f0ee47059a566ad023c6a5b1d53 215 Gene3D G3DSA:3.40.50.2300 3 106 2.5E-7 T 28-03-2018 AL504_RS21435 1fd58f0ee47059a566ad023c6a5b1d53 215 SUPERFAMILY SSF46894 117 206 1.81E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS30020 8c597b85ae8dcc5e8314b030079f8ad8 110 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 45 4.4E-15 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AL504_RS30020 8c597b85ae8dcc5e8314b030079f8ad8 110 SMART SM00834 1 41 1.3E-14 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AL504_RS30020 8c597b85ae8dcc5e8314b030079f8ad8 110 Pfam PF09723 Zinc ribbon domain 1 39 1.8E-11 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AL504_RS01170 33afe3086bacb048a6dd89e88a02de36 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 82 3.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01170 33afe3086bacb048a6dd89e88a02de36 319 Gene3D G3DSA:3.40.190.10 107 192 3.2E-12 T 28-03-2018 AL504_RS01170 33afe3086bacb048a6dd89e88a02de36 319 Gene3D G3DSA:1.10.10.10 6 106 1.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01170 33afe3086bacb048a6dd89e88a02de36 319 Pfam PF03466 LysR substrate binding domain 109 312 2.4E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01170 33afe3086bacb048a6dd89e88a02de36 319 SUPERFAMILY SSF53850 110 314 6.33E-41 T 28-03-2018 AL504_RS01170 33afe3086bacb048a6dd89e88a02de36 319 SUPERFAMILY SSF46785 19 131 6.82E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01170 33afe3086bacb048a6dd89e88a02de36 319 Gene3D G3DSA:3.40.190.10 193 280 4.9E-25 T 28-03-2018 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 Pfam PF00406 Adenylate kinase 5 185 1.4E-57 T 28-03-2018 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 PRINTS PR00094 Adenylate kinase signature 4 17 5.8E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 PRINTS PR00094 Adenylate kinase signature 81 97 5.8E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 PRINTS PR00094 Adenylate kinase signature 156 171 5.8E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 PRINTS PR00094 Adenylate kinase signature 32 46 5.8E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 PRINTS PR00094 Adenylate kinase signature 173 187 5.8E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 TIGRFAM TIGR01351 adk: adenylate kinase 2 190 1.8E-73 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 SUPERFAMILY SSF52540 1 190 1.05E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 Gene3D G3DSA:3.40.50.300 1 218 1.6E-64 T 28-03-2018 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 Hamap MF_00235 Adenylate kinase [adk]. 1 217 53.448 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL504_RS30370 f95f991cef99c4253abb38b16698f349 218 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-17 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL504_RS23160 1e802c21cafe5b3dad76fefc581b9e2c 471 SUPERFAMILY SSF55103 218 469 1.96E-57 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS23160 1e802c21cafe5b3dad76fefc581b9e2c 471 SUPERFAMILY SSF56176 3 215 3.0E-79 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS23160 1e802c21cafe5b3dad76fefc581b9e2c 471 Gene3D G3DSA:1.10.45.10 429 468 3.2E-17 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL504_RS23160 1e802c21cafe5b3dad76fefc581b9e2c 471 Gene3D G3DSA:3.30.465.10 94 214 1.1E-39 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS23160 1e802c21cafe5b3dad76fefc581b9e2c 471 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 468 8.0E-53 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS23160 1e802c21cafe5b3dad76fefc581b9e2c 471 Pfam PF01565 FAD binding domain 38 175 8.7E-38 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS23160 1e802c21cafe5b3dad76fefc581b9e2c 471 Gene3D G3DSA:3.30.43.10 1 93 7.1E-27 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 Gene3D G3DSA:2.40.30.10 103 203 5.9E-19 T 28-03-2018 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 7.8E-16 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 SUPERFAMILY SSF54292 1 90 2.1E-28 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 4.9E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 304 312 4.9E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 231 4.9E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 132 142 4.9E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 SUPERFAMILY SSF52343 204 338 2.88E-40 T 28-03-2018 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 Gene3D G3DSA:3.10.20.30 1 102 2.6E-24 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 Pfam PF00970 Oxidoreductase FAD-binding domain 106 201 2.9E-12 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 3.1E-23 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 3.1E-23 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 231 3.1E-23 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00410 Phenol hydroxylase reductase family signature 304 312 3.1E-23 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00410 Phenol hydroxylase reductase family signature 237 246 3.1E-23 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 3.1E-23 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 Pfam PF00175 Oxidoreductase NAD-binding domain 213 318 3.6E-22 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 Gene3D G3DSA:3.40.50.80 204 340 2.5E-26 T 28-03-2018 AL504_RS09235 46baed242335ed48350b2625f1a6a301 348 SUPERFAMILY SSF63380 103 203 8.6E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS29000 96a7062aa67d593ed35e61186c532682 442 SUPERFAMILY SSF53383 37 441 6.34E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS29000 96a7062aa67d593ed35e61186c532682 442 Gene3D G3DSA:3.40.640.10 68 322 3.6E-70 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS29000 96a7062aa67d593ed35e61186c532682 442 PIRSF PIRSF000521 37 144 6.4E-7 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS29000 96a7062aa67d593ed35e61186c532682 442 PIRSF PIRSF000521 199 442 4.1E-30 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS29000 96a7062aa67d593ed35e61186c532682 442 Pfam PF00202 Aminotransferase class-III 45 436 4.5E-76 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS29000 96a7062aa67d593ed35e61186c532682 442 Gene3D G3DSA:3.90.1150.10 323 442 7.3E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS29000 96a7062aa67d593ed35e61186c532682 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 290 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82693 672 721 1.07E-25 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82693 808 856 1.07E-25 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82866 296 497 1.07E-48 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82693 274 329 8.37E-24 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82693 135 182 8.37E-24 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82866 831 1024 3.53E-44 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82693 38 128 9.42E-26 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82714 182 272 9.29E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 Gene3D G3DSA:3.30.70.1430 568 668 2.7E-18 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 Gene3D G3DSA:1.20.1640.10 274 500 1.1E-45 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 Gene3D G3DSA:1.20.1640.10 811 1027 1.4E-39 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 Gene3D G3DSA:3.30.70.1430 38 140 4.9E-26 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 Gene3D G3DSA:3.30.70.1440 672 768 4.6E-15 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82714 723 808 5.1E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 SUPERFAMILY SSF82693 566 669 6.02E-26 T 28-03-2018 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.6E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27115 9c7ed86d5074ad2e589f04de0813b5b1 1073 Gene3D G3DSA:3.30.2090.10 180 273 9.4E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12605 e042c9748349862ca537333fef52ece3 324 Gene3D G3DSA:3.40.50.10330 14 149 4.7E-23 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AL504_RS12605 e042c9748349862ca537333fef52ece3 324 SUPERFAMILY SSF111331 20 317 2.4E-53 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AL504_RS12605 e042c9748349862ca537333fef52ece3 324 Pfam PF00781 Diacylglycerol kinase catalytic domain 21 143 1.6E-22 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 Pfam PF00308 Bacterial dnaA protein 150 367 4.4E-86 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 Pfam PF11638 DnaA N-terminal domain 3 66 5.8E-18 T 28-03-2018 IPR024633 DnaA N-terminal domain AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 ProSitePatterns PS01008 DnaA protein signature. 444 463 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 215 229 3.3E-49 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 444 463 3.3E-49 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 247 261 3.3E-49 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 183 203 3.3E-49 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 281 308 3.3E-49 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 SUPERFAMILY SSF52540 150 361 3.17E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 Gene3D G3DSA:1.10.8.60 316 388 1.1E-24 T 28-03-2018 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 484 3.2E-164 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 SMART SM00760 394 463 3.0E-43 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 395 463 2.3E-31 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 Gene3D G3DSA:1.10.1750.10 389 485 4.5E-34 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 485 31.673 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 SUPERFAMILY SSF48295 382 485 3.14E-36 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 Gene3D G3DSA:3.40.50.300 147 314 7.3E-21 T 28-03-2018 AL504_RS19345 31a8745b4fc46c96b5f0e77d98e75840 486 SMART SM00382 182 316 2.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS18030 f77e02edd089c2d118d0d28fd252da02 122 PRINTS PR00332 Histidine triad family signature 98 108 7.8E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS18030 f77e02edd089c2d118d0d28fd252da02 122 PRINTS PR00332 Histidine triad family signature 27 45 7.8E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS18030 f77e02edd089c2d118d0d28fd252da02 122 PRINTS PR00332 Histidine triad family signature 6 22 7.8E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS18030 f77e02edd089c2d118d0d28fd252da02 122 Pfam PF11969 Scavenger mRNA decapping enzyme C-term binding 4 109 8.7E-25 T 28-03-2018 AL504_RS18030 f77e02edd089c2d118d0d28fd252da02 122 SUPERFAMILY SSF54197 2 114 1.84E-39 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL504_RS18030 f77e02edd089c2d118d0d28fd252da02 122 Gene3D G3DSA:3.30.428.10 1 115 2.2E-35 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL504_RS18030 f77e02edd089c2d118d0d28fd252da02 122 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 28-03-2018 IPR019808 Histidine triad, conserved site AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 Pfam PF00202 Aminotransferase class-III 22 416 4.7E-115 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 417 6.2E-164 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 SUPERFAMILY SSF53383 5 418 5.44E-124 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 Gene3D G3DSA:3.90.1150.10 3 185 9.8E-47 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 PIRSF PIRSF000521 17 420 2.0E-29 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 Gene3D G3DSA:3.90.1150.10 316 420 1.4E-9 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS27205 57c1b281ae56ca2f4b7ee2e57d3187b8 422 Gene3D G3DSA:3.40.640.10 186 315 2.2E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS16130 ea0b18b782820418008752e36f73fee5 523 SUPERFAMILY SSF56954 70 486 8.5E-112 T 28-03-2018 AL504_RS16130 ea0b18b782820418008752e36f73fee5 523 SUPERFAMILY SSF56954 11 38 8.5E-112 T 28-03-2018 AL504_RS16130 ea0b18b782820418008752e36f73fee5 523 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 483 2.6E-133 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS16130 ea0b18b782820418008752e36f73fee5 523 Pfam PF02321 Outer membrane efflux protein 300 481 1.1E-24 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS16130 ea0b18b782820418008752e36f73fee5 523 Pfam PF02321 Outer membrane efflux protein 81 274 2.4E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS16130 ea0b18b782820418008752e36f73fee5 523 Gene3D G3DSA:1.20.1600.10 29 487 3.4E-105 T 28-03-2018 AL504_RS05540 ff1a50876e81c2da834bd9413f691013 144 SUPERFAMILY SSF49464 78 133 3.18E-5 T 28-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain AL504_RS05540 ff1a50876e81c2da834bd9413f691013 144 Gene3D G3DSA:2.60.40.1120 38 144 7.0E-8 T 28-03-2018 AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 1.3E-41 T 28-03-2018 AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 Gene3D G3DSA:3.40.50.720 4 173 2.0E-43 T 28-03-2018 AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 SUPERFAMILY SSF51735 6 259 6.88E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 Gene3D G3DSA:3.40.50.720 174 255 2.2E-14 T 28-03-2018 AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 204 3.1E-7 T 28-03-2018 AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 5.9E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 5.9E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 5.9E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 5.9E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.9E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.9E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14315 884cc2331ca6e229413d5e3903ccf1fd 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 PIRSF PIRSF036389 11 755 2.8E-182 T 28-03-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Gene3D G3DSA:3.90.1170.50 195 338 3.7E-27 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 327 607 9.9E-30 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 617 701 3.7E-11 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 69 214 4.3E-21 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Gene3D G3DSA:3.30.365.10 434 610 1.9E-36 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 SUPERFAMILY SSF56003 324 756 1.74E-111 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Gene3D G3DSA:3.30.365.10 339 433 9.9E-24 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 SUPERFAMILY SSF56003 66 244 7.33E-32 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Gene3D G3DSA:3.30.365.10 38 194 5.5E-34 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 SUPERFAMILY SSF54665 219 305 1.88E-7 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 Gene3D G3DSA:3.30.365.10 611 760 1.2E-33 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01605 080eb7dc889f2ac329c4a85fb38d0301 767 SMART SM01008 218 304 6.9E-17 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 243 1.5E-51 T 28-03-2018 AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 SUPERFAMILY SSF51735 4 245 1.72E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.009 T 28-03-2018 AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 5.3E-91 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 Gene3D G3DSA:3.40.50.720 3 245 6.3E-61 T 28-03-2018 AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS12810 b188ae2033966447610c69a8d80424c0 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25160 530378303938515a7ed7d3e8bf72751c 169 Pfam PF08281 Sigma-70, region 4 111 164 5.5E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25160 530378303938515a7ed7d3e8bf72751c 169 Gene3D G3DSA:1.10.1740.10 4 85 3.5E-20 T 28-03-2018 AL504_RS25160 530378303938515a7ed7d3e8bf72751c 169 SUPERFAMILY SSF88659 106 164 1.49E-10 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25160 530378303938515a7ed7d3e8bf72751c 169 Pfam PF04542 Sigma-70 region 2 15 81 1.2E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25160 530378303938515a7ed7d3e8bf72751c 169 Gene3D G3DSA:1.10.10.10 91 164 8.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25160 530378303938515a7ed7d3e8bf72751c 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 163 8.4E-23 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25160 530378303938515a7ed7d3e8bf72751c 169 SUPERFAMILY SSF88946 10 101 1.65E-20 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 Pfam PF00072 Response regulator receiver domain 11 130 2.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 SMART SM00421 155 212 6.3E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 Gene3D G3DSA:1.10.10.10 142 218 2.9E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 SUPERFAMILY SSF46894 146 215 1.19E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 SMART SM00448 8 130 1.6E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.7E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.7E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.7E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 SUPERFAMILY SSF52172 7 141 2.42E-31 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 6.6E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS02475 0f7b01e65dfb9aad526836f3d2485d6f 218 Gene3D G3DSA:3.40.50.2300 7 141 5.3E-33 T 28-03-2018 AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 Pfam PF00501 AMP-binding enzyme 7 402 7.5E-83 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 Gene3D G3DSA:3.30.300.30 397 501 1.0E-25 T 28-03-2018 AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 Pfam PF13193 AMP-binding enzyme C-terminal domain 412 486 6.2E-19 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 Gene3D G3DSA:2.30.38.10 312 395 1.3E-22 T 28-03-2018 AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 Gene3D G3DSA:3.40.50.980 162 311 7.6E-34 T 28-03-2018 AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 Gene3D G3DSA:3.40.50.980 3 161 8.9E-31 T 28-03-2018 AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS21685 c02215ffa3fdfd4f45bb515a690f82d3 501 SUPERFAMILY SSF56801 4 497 5.76E-132 T 28-03-2018 AL504_RS01165 59443648148010a3ff1d53a8cb96dab1 541 Pfam PF07690 Major Facilitator Superfamily 34 433 8.1E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01165 59443648148010a3ff1d53a8cb96dab1 541 Gene3D G3DSA:1.20.1250.20 273 540 1.6E-19 T 28-03-2018 AL504_RS01165 59443648148010a3ff1d53a8cb96dab1 541 SUPERFAMILY SSF103473 18 212 4.71E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01165 59443648148010a3ff1d53a8cb96dab1 541 SUPERFAMILY SSF103473 503 529 4.71E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01165 59443648148010a3ff1d53a8cb96dab1 541 SUPERFAMILY SSF103473 269 443 4.71E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01165 59443648148010a3ff1d53a8cb96dab1 541 Gene3D G3DSA:1.20.1250.20 25 220 4.3E-21 T 28-03-2018 AL504_RS01165 59443648148010a3ff1d53a8cb96dab1 541 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 32 523 3.3E-69 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 SMART SM01130 4 296 8.2E-84 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 PIRSF PIRSF001365 1 294 5.1E-73 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 Gene3D G3DSA:3.20.20.70 2 294 3.1E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.1E-11 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.1E-11 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.1E-11 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 Pfam PF00701 Dihydrodipicolinate synthetase family 6 286 5.8E-53 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS02840 506ac45c093c40629de7a9c0e796d44d 300 SUPERFAMILY SSF51569 4 289 2.62E-80 T 28-03-2018 AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 440 5.0E-200 T 28-03-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 SUPERFAMILY SSF52540 96 366 2.09E-95 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 440 4.7E-180 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 4.3E-9 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 Gene3D G3DSA:3.40.50.300 95 367 6.0E-86 T 28-03-2018 AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 SMART SM00382 163 344 4.5E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15350 4e972e5bb886d5917a8d758d15544597 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 360 2.0E-75 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 Gene3D G3DSA:1.10.287.130 370 446 2.3E-12 T 28-03-2018 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 447 2.1E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 SUPERFAMILY SSF55874 442 607 8.77E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 SUPERFAMILY SSF103190 76 181 1.71E-15 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 SMART SM00387 492 610 3.2E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 Gene3D G3DSA:3.30.450.20 157 297 4.0E-4 T 28-03-2018 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 Gene3D G3DSA:3.30.450.20 49 156 2.3E-19 T 28-03-2018 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 Gene3D G3DSA:3.30.565.10 450 616 1.2E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 SUPERFAMILY SSF47384 367 446 2.16E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 PIRSF PIRSF036431 1 616 1.6E-182 T 28-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 608 2.2E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 1.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 545 1.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 559 1.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS09475 b600266fffc58dffd50c29e34cb8c82b 618 SMART SM00388 382 450 5.5E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS21860 594ce5d2ff2dbb147a41a8a116e4e121 311 PIRSF PIRSF000105 1 305 1.8E-94 T 28-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AL504_RS21860 594ce5d2ff2dbb147a41a8a116e4e121 311 Gene3D G3DSA:3.40.50.720 2 180 1.1E-52 T 28-03-2018 AL504_RS21860 594ce5d2ff2dbb147a41a8a116e4e121 311 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 183 281 1.3E-23 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS21860 594ce5d2ff2dbb147a41a8a116e4e121 311 SUPERFAMILY SSF51735 5 179 4.94E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21860 594ce5d2ff2dbb147a41a8a116e4e121 311 SUPERFAMILY SSF48179 182 288 1.45E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS21860 594ce5d2ff2dbb147a41a8a116e4e121 311 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 180 9.7E-60 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS21860 594ce5d2ff2dbb147a41a8a116e4e121 311 Gene3D G3DSA:1.10.1040.10 182 286 1.3E-28 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS09185 73388f4619f29096c152320dd7740688 218 Pfam PF13560 Helix-turn-helix domain 26 83 1.9E-13 T 28-03-2018 AL504_RS09185 73388f4619f29096c152320dd7740688 218 Gene3D G3DSA:1.10.260.40 17 76 5.2E-16 T 28-03-2018 AL504_RS09185 73388f4619f29096c152320dd7740688 218 SUPERFAMILY SSF51182 69 204 3.93E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS09185 73388f4619f29096c152320dd7740688 218 Pfam PF07883 Cupin domain 133 202 3.2E-12 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS09185 73388f4619f29096c152320dd7740688 218 SMART SM00530 29 84 1.8E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS09185 73388f4619f29096c152320dd7740688 218 SUPERFAMILY SSF47413 23 89 9.38E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS09185 73388f4619f29096c152320dd7740688 218 Gene3D G3DSA:2.60.120.10 77 215 4.6E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS29270 34f8870f16cd14a9f41d56ff5919db02 201 SUPERFAMILY SSF53335 6 180 5.22E-26 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS29270 34f8870f16cd14a9f41d56ff5919db02 201 Pfam PF05401 Nodulation protein S (NodS) 15 130 5.2E-18 T 28-03-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 AL504_RS29270 34f8870f16cd14a9f41d56ff5919db02 201 Gene3D G3DSA:3.40.50.150 24 192 2.5E-28 T 28-03-2018 AL504_RS12185 35acc8e9be7fc1b114a97a8759a99964 200 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 185 1.6E-40 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS12185 35acc8e9be7fc1b114a97a8759a99964 200 Gene3D G3DSA:3.90.950.10 3 192 3.7E-51 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL504_RS12185 35acc8e9be7fc1b114a97a8759a99964 200 Pfam PF02545 Maf-like protein 7 186 1.5E-40 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS12185 35acc8e9be7fc1b114a97a8759a99964 200 PIRSF PIRSF006305 1 194 2.6E-45 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS12185 35acc8e9be7fc1b114a97a8759a99964 200 SUPERFAMILY SSF52972 5 186 7.19E-53 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL504_RS12185 35acc8e9be7fc1b114a97a8759a99964 200 Hamap MF_00528 Septum formation protein Maf [maf]. 6 192 28.144 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 9.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 9.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 Gene3D G3DSA:1.10.10.10 1 88 9.1E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 Pfam PF07729 FCD domain 111 236 1.5E-24 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 SMART SM00345 27 86 2.3E-26 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 6.9E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 SUPERFAMILY SSF46785 19 90 1.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 SMART SM00895 110 237 5.5E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 Gene3D G3DSA:1.20.120.530 95 252 2.1E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS21980 3cfd234d2696fcfff566c88e44047bab 253 SUPERFAMILY SSF48008 106 242 1.28E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS07110 644bfe2988429cbecc796c233bf1a899 333 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS07110 644bfe2988429cbecc796c233bf1a899 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 5.0E-28 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS07110 644bfe2988429cbecc796c233bf1a899 333 Pfam PF00005 ABC transporter 30 188 2.4E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS07110 644bfe2988429cbecc796c233bf1a899 333 Gene3D G3DSA:3.40.50.300 6 332 1.4E-79 T 28-03-2018 AL504_RS07110 644bfe2988429cbecc796c233bf1a899 333 SMART SM00382 38 246 1.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07110 644bfe2988429cbecc796c233bf1a899 333 SUPERFAMILY SSF52540 9 259 2.15E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07110 644bfe2988429cbecc796c233bf1a899 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 304 7.6E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS15960 ce2a50057e25f7915c23f6f1447c9e11 581 Pfam PF03961 Flagellar Assembly Protein A 117 578 4.6E-112 T 28-03-2018 IPR005646 Flagellar assembly protein A AL504_RS15960 ce2a50057e25f7915c23f6f1447c9e11 581 Gene3D G3DSA:2.160.20.70 296 394 1.0E-7 T 28-03-2018 AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 SMART SM00829 15 326 6.8E-36 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 Gene3D G3DSA:3.40.50.720 153 248 7.3E-19 T 28-03-2018 AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 SUPERFAMILY SSF50129 6 148 1.89E-38 T 28-03-2018 IPR011032 GroES-like AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 SUPERFAMILY SSF51735 115 271 2.02E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 Gene3D G3DSA:3.90.180.10 249 329 9.5E-4 T 28-03-2018 AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 Pfam PF00107 Zinc-binding dehydrogenase 155 262 5.0E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 Gene3D G3DSA:3.90.180.10 2 152 2.6E-45 T 28-03-2018 AL504_RS09385 6c173659f3cc1e2903ee3aca96d1c7c4 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 6.9E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS16375 5e907fc25ddcf6c4b40edf93b03503ed 243 SUPERFAMILY SSF52540 2 235 1.73E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16375 5e907fc25ddcf6c4b40edf93b03503ed 243 Pfam PF00005 ABC transporter 17 165 4.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16375 5e907fc25ddcf6c4b40edf93b03503ed 243 Gene3D G3DSA:3.40.50.300 1 242 8.9E-74 T 28-03-2018 AL504_RS16375 5e907fc25ddcf6c4b40edf93b03503ed 243 PIRSF PIRSF039085 1 240 2.1E-108 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS16375 5e907fc25ddcf6c4b40edf93b03503ed 243 SMART SM00382 26 209 5.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16375 5e907fc25ddcf6c4b40edf93b03503ed 243 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.8 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 SUPERFAMILY SSF47917 383 510 2.59E-45 T 28-03-2018 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 Gene3D G3DSA:2.40.30.20 3 82 5.6E-33 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 SUPERFAMILY SSF50615 10 94 3.14E-28 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 Gene3D G3DSA:3.40.50.300 83 375 1.0E-116 T 28-03-2018 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.8E-74 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 Gene3D G3DSA:1.20.150.20 384 510 1.0E-46 T 28-03-2018 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 PIRSF PIRSF039088 1 513 2.0E-238 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 3.2E-249 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.3E-16 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.3E-45 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16925 b96abf3c7c330931db832094ff27e8cb 513 SUPERFAMILY SSF52540 96 381 3.75E-95 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS02285 2662726e55a6a38749d5da1b3be60835 557 Gene3D G3DSA:3.30.43.10 3 91 6.1E-12 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS02285 2662726e55a6a38749d5da1b3be60835 557 SUPERFAMILY SSF56176 26 223 1.21E-22 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS02285 2662726e55a6a38749d5da1b3be60835 557 Pfam PF01565 FAD binding domain 34 180 2.0E-9 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS02285 2662726e55a6a38749d5da1b3be60835 557 Pfam PF08031 Berberine and berberine like 496 551 6.1E-13 T 28-03-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 AL504_RS02285 2662726e55a6a38749d5da1b3be60835 557 Gene3D G3DSA:3.30.465.10 109 245 5.5E-16 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 SMART SM00843 722 787 7.6E-39 T 28-03-2018 IPR018541 FtsK gamma domain AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 Gene3D G3DSA:1.10.10.10 724 778 5.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 216 1.4E-44 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 SUPERFAMILY SSF52540 423 686 2.52E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 Pfam PF01580 FtsK/SpoIIIE family 406 615 1.4E-64 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 Gene3D G3DSA:3.40.50.300 232 656 3.4E-56 T 28-03-2018 AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 SUPERFAMILY SSF46785 722 786 1.02E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 SMART SM00382 441 636 0.0069 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13285 eb08fb22982f1a569ab85194dc56c0ac 792 Pfam PF09397 Ftsk gamma domain 724 784 4.7E-27 T 28-03-2018 IPR018541 FtsK gamma domain AL504_RS18570 b7c90f9aaefbae5ec1b425e62e6701f4 431 Gene3D G3DSA:3.40.190.10 145 427 2.2E-51 T 28-03-2018 AL504_RS18570 b7c90f9aaefbae5ec1b425e62e6701f4 431 SUPERFAMILY SSF53850 30 424 1.33E-78 T 28-03-2018 AL504_RS18570 b7c90f9aaefbae5ec1b425e62e6701f4 431 Pfam PF13416 Bacterial extracellular solute-binding protein 50 366 5.4E-50 T 28-03-2018 AL504_RS22945 67b48274ea8f83b5876a3ec7552b6260 630 Pfam PF17243 POTRA domain TamA domain 1 32 94 8.3E-7 T 28-03-2018 IPR035243 TamA, POTRA domain 1 AL504_RS22945 67b48274ea8f83b5876a3ec7552b6260 630 Gene3D G3DSA:3.10.20.310 193 263 3.6E-6 T 28-03-2018 AL504_RS22945 67b48274ea8f83b5876a3ec7552b6260 630 Gene3D G3DSA:3.10.20.310 104 192 8.0E-11 T 28-03-2018 AL504_RS22945 67b48274ea8f83b5876a3ec7552b6260 630 Pfam PF01103 Surface antigen 443 630 2.7E-23 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL504_RS22945 67b48274ea8f83b5876a3ec7552b6260 630 Gene3D G3DSA:2.40.160.50 292 630 1.4E-40 T 28-03-2018 AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 Gene3D G3DSA:1.10.287.90 27 112 6.2E-20 T 28-03-2018 AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 PIRSF PIRSF000292 2 299 4.8E-132 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 SUPERFAMILY SSF81464 28 116 2.29E-23 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 SUPERFAMILY SSF49503 121 278 1.59E-50 T 28-03-2018 IPR008972 Cupredoxin AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 237 4.0E-116 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 Pfam PF06481 COX Aromatic Rich Motif 237 281 3.0E-12 T 28-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 218 3.2E-5 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25015 dab59a195683c2d9bc814b33ccc669fc 303 Gene3D G3DSA:2.60.40.420 113 278 2.0E-51 T 28-03-2018 IPR008972 Cupredoxin AL504_RS23735 62b9e103d4381f04528260e377162706 171 ProSitePatterns PS00213 Lipocalin signature. 29 40 - T 28-03-2018 IPR022272 Lipocalin family conserved site AL504_RS23735 62b9e103d4381f04528260e377162706 171 PIRSF PIRSF036893 1 171 7.6E-34 T 28-03-2018 IPR022271 Lipocalin, ApoD type AL504_RS23735 62b9e103d4381f04528260e377162706 171 Gene3D G3DSA:2.40.128.20 1 169 1.0E-23 T 28-03-2018 IPR012674 Calycin AL504_RS23735 62b9e103d4381f04528260e377162706 171 SUPERFAMILY SSF50814 5 170 3.68E-32 T 28-03-2018 IPR012674 Calycin AL504_RS23735 62b9e103d4381f04528260e377162706 171 Pfam PF08212 Lipocalin-like domain 28 168 1.6E-37 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AL504_RS29215 5a3d4b9c96cd0acaa933f88fe49e89b4 179 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 131 2.8E-32 T 28-03-2018 AL504_RS29215 5a3d4b9c96cd0acaa933f88fe49e89b4 179 Gene3D G3DSA:3.10.180.10 3 164 8.8E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS29215 5a3d4b9c96cd0acaa933f88fe49e89b4 179 SUPERFAMILY SSF54593 8 146 1.83E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 642 2.2E-122 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 645 7.8E-221 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.2E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 2.2E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.2E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 635 648 2.2E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 2.2E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 2.2E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 2.2E-54 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 Pfam PF01578 Cytochrome C assembly protein 89 295 3.1E-50 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07520 c310d8af768d4a20a2dd47660f52782d 669 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 8.8E-91 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 59 75 1.5E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 346 361 1.5E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 78 96 1.5E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 294 307 1.5E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 SUPERFAMILY SSF53822 37 392 3.7E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 Gene3D G3DSA:3.40.50.2300 34 190 4.9E-27 T 28-03-2018 AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 Pfam PF13458 Periplasmic binding protein 38 374 3.8E-72 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS26900 a3515ae6be95f1216a66c764494f6de0 409 Gene3D G3DSA:3.40.50.2300 191 369 1.4E-22 T 28-03-2018 AL504_RS01000 bb013330480fb207e266921a8b401b0f 305 Gene3D G3DSA:1.10.3720.10 16 294 7.2E-46 T 28-03-2018 AL504_RS01000 bb013330480fb207e266921a8b401b0f 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 63 1.2E-10 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS01000 bb013330480fb207e266921a8b401b0f 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 304 7.9E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01000 bb013330480fb207e266921a8b401b0f 305 SUPERFAMILY SSF161098 97 289 5.89E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13880 cc8c0f7c25bab3149f5c67b3dd88769e 329 SUPERFAMILY SSF161098 89 305 5.63E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13880 cc8c0f7c25bab3149f5c67b3dd88769e 329 Gene3D G3DSA:1.10.3720.10 3 308 6.8E-42 T 28-03-2018 AL504_RS13880 cc8c0f7c25bab3149f5c67b3dd88769e 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 8.3E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 SUPERFAMILY SSF52172 9 158 5.27E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 5.5E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 SMART SM00448 8 119 9.5E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 Gene3D G3DSA:1.10.10.10 131 204 7.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 Gene3D G3DSA:3.40.50.2300 2 130 1.7E-32 T 28-03-2018 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 2.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 2.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 2.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 SUPERFAMILY SSF46894 138 200 2.55E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 Pfam PF00072 Response regulator receiver domain 10 119 8.2E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS06665 81cfed34c5a95136b926ee361bf17054 208 SMART SM00421 143 200 2.3E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 SUPERFAMILY SSF51735 6 139 1.61E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 SUPERFAMILY SSF55347 117 289 1.24E-36 T 28-03-2018 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 Gene3D G3DSA:3.30.360.10 126 289 3.2E-46 T 28-03-2018 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 112 128 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 306 2.7E-121 T 28-03-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 45 100 9.2E-10 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 308 51.444 T 28-03-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 Gene3D G3DSA:3.40.50.720 6 125 1.8E-20 T 28-03-2018 AL504_RS03105 2409c8bb9e5b40b34449ac64fbd49373 314 SMART SM00859 5 106 2.4E-9 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 Gene3D G3DSA:3.20.80.10 139 305 5.8E-31 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 Pfam PF06445 GyrI-like small molecule binding domain 153 305 5.4E-28 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 83 99 1.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 68 83 1.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 SUPERFAMILY SSF46689 1 49 1.52E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 SMART SM00342 15 99 2.7E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 SUPERFAMILY SSF46689 51 101 1.08E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 SUPERFAMILY SSF55136 153 305 1.09E-35 T 28-03-2018 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 Pfam PF12833 Helix-turn-helix domain 21 100 5.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 Gene3D G3DSA:1.10.10.60 52 119 1.4E-9 T 28-03-2018 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 Gene3D G3DSA:1.10.10.60 1 51 3.3E-13 T 28-03-2018 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 52 95 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS28875 7bed5a7cd8d05d39881f84cf91b9e48d 307 SMART SM00871 153 305 6.5E-33 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AL504_RS18585 322a1baef35c1947e673f46688d179c1 798 Gene3D G3DSA:3.90.20.10 204 458 0.0019 T 28-03-2018 AL504_RS14115 debb51156958c9fea4e1dabc0a428d45 385 SUPERFAMILY SSF51395 7 381 3.17E-91 T 28-03-2018 AL504_RS14115 debb51156958c9fea4e1dabc0a428d45 385 Pfam PF01070 FMN-dependent dehydrogenase 18 381 9.6E-124 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AL504_RS14115 debb51156958c9fea4e1dabc0a428d45 385 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 278 284 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AL504_RS14115 debb51156958c9fea4e1dabc0a428d45 385 PIRSF PIRSF000138 1 384 7.7E-120 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AL504_RS14115 debb51156958c9fea4e1dabc0a428d45 385 Gene3D G3DSA:3.20.20.70 7 384 8.5E-92 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS25105 3e83cbc01817806bd3e38422a1a62f35 303 Gene3D G3DSA:3.40.190.10 179 265 1.9E-24 T 28-03-2018 AL504_RS25105 3e83cbc01817806bd3e38422a1a62f35 303 SUPERFAMILY SSF53850 90 300 1.43E-37 T 28-03-2018 AL504_RS25105 3e83cbc01817806bd3e38422a1a62f35 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 1.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25105 3e83cbc01817806bd3e38422a1a62f35 303 Gene3D G3DSA:3.40.190.10 92 178 2.5E-10 T 28-03-2018 AL504_RS25105 3e83cbc01817806bd3e38422a1a62f35 303 Pfam PF03466 LysR substrate binding domain 90 296 3.9E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS25105 3e83cbc01817806bd3e38422a1a62f35 303 SUPERFAMILY SSF46785 9 114 6.61E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25105 3e83cbc01817806bd3e38422a1a62f35 303 Gene3D G3DSA:1.10.10.10 5 91 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30515 8667dd3348bd9e4f74d5671941283482 265 Gene3D G3DSA:3.40.50.1820 10 265 4.7E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS30515 8667dd3348bd9e4f74d5671941283482 265 SUPERFAMILY SSF53474 15 261 7.33E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS30515 8667dd3348bd9e4f74d5671941283482 265 Pfam PF12697 Alpha/beta hydrolase family 27 254 4.9E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Gene3D G3DSA:1.10.760.10 832 962 3.1E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Gene3D G3DSA:1.10.760.10 684 831 5.2E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 SUPERFAMILY SSF46626 550 677 2.49E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Gene3D G3DSA:1.10.760.10 526 668 1.8E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Pfam PF00034 Cytochrome c 556 655 1.0E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 853 934 1.1E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 SUPERFAMILY SSF46626 828 947 7.9E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 SUPERFAMILY SSF46626 685 815 4.57E-15 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Gene3D G3DSA:3.30.365.10 281 400 3.8E-11 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Gene3D G3DSA:3.30.365.10 464 507 9.5E-7 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 Gene3D G3DSA:3.30.365.10 117 207 6.8E-4 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS01635 7f2d4f145c2e78dbe32744d2b81eb118 962 SUPERFAMILY SSF56003 122 502 4.41E-18 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 Pfam PF13416 Bacterial extracellular solute-binding protein 45 332 1.1E-35 T 28-03-2018 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 SUPERFAMILY SSF53850 28 366 1.8E-96 T 28-03-2018 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 Gene3D G3DSA:3.40.190.10 20 209 4.8E-34 T 28-03-2018 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 9.7E-64 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 PIRSF PIRSF019574 1 367 2.0E-140 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS10010 a190b7b75ba33ef533eb806933565b5b 367 Gene3D G3DSA:3.40.190.10 210 342 1.4E-15 T 28-03-2018 AL504_RS15825 146224901f53a81d53644c4585bd0356 223 SMART SM00448 1 112 2.3E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS15825 146224901f53a81d53644c4585bd0356 223 Gene3D G3DSA:1.10.10.10 122 222 3.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15825 146224901f53a81d53644c4585bd0356 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.9E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS15825 146224901f53a81d53644c4585bd0356 223 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS15825 146224901f53a81d53644c4585bd0356 223 SMART SM00862 145 217 3.0E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS15825 146224901f53a81d53644c4585bd0356 223 Gene3D G3DSA:3.40.50.2300 1 121 3.0E-33 T 28-03-2018 AL504_RS15825 146224901f53a81d53644c4585bd0356 223 SUPERFAMILY SSF52172 1 162 1.32E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS02625 b9131aa86b7ba641737d03b61bb108ee 473 Gene3D G3DSA:3.40.630.10 10 208 3.2E-26 T 28-03-2018 AL504_RS02625 b9131aa86b7ba641737d03b61bb108ee 473 SUPERFAMILY SSF53187 369 455 1.89E-47 T 28-03-2018 AL504_RS02625 b9131aa86b7ba641737d03b61bb108ee 473 SUPERFAMILY SSF53187 18 205 1.89E-47 T 28-03-2018 AL504_RS02625 b9131aa86b7ba641737d03b61bb108ee 473 Pfam PF07687 Peptidase dimerisation domain 203 355 6.3E-10 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS02625 b9131aa86b7ba641737d03b61bb108ee 473 Gene3D G3DSA:3.30.70.360 209 366 3.5E-29 T 28-03-2018 AL504_RS02625 b9131aa86b7ba641737d03b61bb108ee 473 Pfam PF01546 Peptidase family M20/M25/M40 89 450 3.2E-22 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 SUPERFAMILY SSF53706 52 668 2.36E-164 T 28-03-2018 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 Pfam PF01568 Molydopterin dinucleotide binding domain 684 804 1.8E-24 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 510 527 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 724 751 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 Gene3D G3DSA:3.90.55.10 534 617 1.3E-22 T 28-03-2018 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 Gene3D G3DSA:3.90.55.10 45 131 1.1E-11 T 28-03-2018 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 Gene3D G3DSA:3.40.228.10 189 479 3.5E-55 T 28-03-2018 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 Pfam PF00384 Molybdopterin oxidoreductase 93 568 1.4E-73 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 SUPERFAMILY SSF50692 677 826 7.46E-44 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS07560 06941251851a48bd0d2d00a0ae9360f6 837 Gene3D G3DSA:2.40.40.20 657 821 2.9E-32 T 28-03-2018 AL504_RS03175 3c26b8191d229edce1c3163450f3dfd7 329 PIRSF PIRSF018266 15 329 1.6E-87 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS03175 3c26b8191d229edce1c3163450f3dfd7 329 Pfam PF16220 Domain of unknown function (DUF4880) 23 63 8.8E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS03175 3c26b8191d229edce1c3163450f3dfd7 329 Pfam PF04773 FecR protein 122 216 2.7E-18 T 28-03-2018 IPR006860 FecR protein AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 1.3E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 1.3E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 1.3E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 225 5.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 SMART SM00421 173 230 7.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 SUPERFAMILY SSF46894 159 230 4.42E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS22585 c9fe6dbbe1b49a455b04be65b769760f 243 Gene3D G3DSA:1.10.10.10 83 233 1.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13675 23989e34185f6b089740090ff5a871a6 283 Pfam PF00483 Nucleotidyl transferase 11 272 1.6E-30 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL504_RS13675 23989e34185f6b089740090ff5a871a6 283 SUPERFAMILY SSF53448 2 273 8.45E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS13675 23989e34185f6b089740090ff5a871a6 283 Gene3D G3DSA:3.90.550.10 1 280 2.5E-60 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS13675 23989e34185f6b089740090ff5a871a6 283 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 269 9.0E-108 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.3E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.3E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.3E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 SUPERFAMILY SSF51735 1 250 5.07E-82 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 178 5.5E-4 T 28-03-2018 AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 Gene3D G3DSA:3.40.50.720 44 253 5.2E-64 T 28-03-2018 AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 Gene3D G3DSA:3.40.50.720 2 43 7.1E-10 T 28-03-2018 AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS18750 67a89098b36b6f9d817db6303db775b0 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 247 1.2E-64 T 28-03-2018 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 Gene3D G3DSA:3.30.450.20 368 506 2.2E-15 T 28-03-2018 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 SUPERFAMILY SSF158472 317 365 1.96E-6 T 28-03-2018 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 Pfam PF00512 His Kinase A (phospho-acceptor) domain 514 581 1.6E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 PIRSF PIRSF037532 1 757 3.7E-237 T 28-03-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 SUPERFAMILY SSF47384 502 582 8.44E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 SUPERFAMILY SSF55785 374 503 4.76E-10 T 28-03-2018 IPR000014 PAS domain AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 Pfam PF08448 PAS fold 388 505 3.1E-5 T 28-03-2018 IPR013656 PAS fold-4 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 Gene3D G3DSA:3.30.565.10 585 764 6.2E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 Pfam PF00672 HAMP domain 316 364 1.3E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 Gene3D G3DSA:1.10.287.130 507 581 7.6E-10 T 28-03-2018 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 SMART SM00387 636 754 1.5E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 SMART SM00304 316 368 7.3E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 SMART SM00388 513 585 1.0E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 SUPERFAMILY SSF55874 574 751 1.09E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 699 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 713 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 732 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS21320 ca922fd8ac464fe1a1db4f2912c82574 773 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 636 749 4.4E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27330 8e1d2cde1ac5857a3092df53206facfc 370 Gene3D G3DSA:3.40.50.2000 174 351 1.3E-38 T 28-03-2018 AL504_RS27330 8e1d2cde1ac5857a3092df53206facfc 370 Gene3D G3DSA:3.40.50.2000 1 173 1.6E-11 T 28-03-2018 AL504_RS27330 8e1d2cde1ac5857a3092df53206facfc 370 Pfam PF00534 Glycosyl transferases group 1 174 337 7.3E-29 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS27330 8e1d2cde1ac5857a3092df53206facfc 370 Pfam PF13439 Glycosyltransferase Family 4 13 155 1.5E-14 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS27330 8e1d2cde1ac5857a3092df53206facfc 370 SUPERFAMILY SSF53756 10 367 1.39E-61 T 28-03-2018 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 Gene3D G3DSA:3.40.50.1820 5 324 1.5E-62 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00412 Epoxide hydrolase signature 31 49 7.5E-31 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00412 Epoxide hydrolase signature 97 110 7.5E-31 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00412 Epoxide hydrolase signature 111 124 7.5E-31 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00412 Epoxide hydrolase signature 298 320 7.5E-31 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00412 Epoxide hydrolase signature 51 66 7.5E-31 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00412 Epoxide hydrolase signature 260 276 7.5E-31 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 1.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 1.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 SUPERFAMILY SSF53474 214 323 1.23E-69 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 SUPERFAMILY SSF53474 4 180 1.23E-69 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS01270 880560e3a4dc6a9e61995573e8a59b01 324 Pfam PF00561 alpha/beta hydrolase fold 25 160 7.9E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS19900 d178537a2424cf58c35b6592796af63f 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 319 2.2E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS19900 d178537a2424cf58c35b6592796af63f 354 Gene3D G3DSA:1.10.3470.10 12 340 5.2E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS13825 c85f98effa3da78a625c444c121fe5af 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 6.2E-31 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL504_RS13825 c85f98effa3da78a625c444c121fe5af 85 Pfam PF03776 Septum formation topological specificity factor MinE 14 81 7.1E-27 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL504_RS13825 c85f98effa3da78a625c444c121fe5af 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 19.13 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL504_RS13825 c85f98effa3da78a625c444c121fe5af 85 Gene3D G3DSA:3.30.1070.10 1 82 7.1E-30 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL504_RS13825 c85f98effa3da78a625c444c121fe5af 85 SUPERFAMILY SSF55229 33 83 1.7E-15 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 Gene3D G3DSA:3.40.50.720 112 287 6.1E-57 T 28-03-2018 AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 309 1.2E-25 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 Gene3D G3DSA:3.40.50.720 1 111 2.5E-30 T 28-03-2018 AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 SUPERFAMILY SSF51735 97 285 7.74E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 284 3.4E-56 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL504_RS16620 1a69d455ff67b4a2d98f011d53adcbb3 311 SUPERFAMILY SSF52283 1 131 1.06E-31 T 28-03-2018 AL504_RS02830 a0f3d40ce352f5e83cc7baffb427ec30 329 PIRSF PIRSF017082 1 328 5.5E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02830 a0f3d40ce352f5e83cc7baffb427ec30 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 325 8.8E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02830 a0f3d40ce352f5e83cc7baffb427ec30 329 Gene3D G3DSA:3.40.190.10 128 263 8.8E-12 T 28-03-2018 AL504_RS02830 a0f3d40ce352f5e83cc7baffb427ec30 329 SUPERFAMILY SSF53850 106 292 4.03E-14 T 28-03-2018 AL504_RS11435 dcaff95834432970fc4092985913880f 361 Gene3D G3DSA:3.30.70.260 273 361 8.2E-26 T 28-03-2018 AL504_RS11435 dcaff95834432970fc4092985913880f 361 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 308 315 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL504_RS11435 dcaff95834432970fc4092985913880f 361 Gene3D G3DSA:3.40.190.10 185 259 1.6E-26 T 28-03-2018 AL504_RS11435 dcaff95834432970fc4092985913880f 361 Pfam PF00800 Prephenate dehydratase 96 270 4.1E-61 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL504_RS11435 dcaff95834432970fc4092985913880f 361 SUPERFAMILY SSF53850 94 278 1.95E-58 T 28-03-2018 AL504_RS11435 dcaff95834432970fc4092985913880f 361 SUPERFAMILY SSF55021 265 359 1.12E-24 T 28-03-2018 AL504_RS11435 dcaff95834432970fc4092985913880f 361 Gene3D G3DSA:3.40.190.10 103 184 5.1E-34 T 28-03-2018 AL504_RS11435 dcaff95834432970fc4092985913880f 361 Pfam PF01817 Chorismate mutase type II 13 91 1.5E-22 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS11435 dcaff95834432970fc4092985913880f 361 TIGRFAM TIGR01807 CM_P2: chorismate mutase 9 84 2.1E-26 T 28-03-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AL504_RS11435 dcaff95834432970fc4092985913880f 361 Gene3D G3DSA:1.20.59.10 4 102 2.3E-34 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS11435 dcaff95834432970fc4092985913880f 361 SMART SM00830 13 94 8.1E-30 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS11435 dcaff95834432970fc4092985913880f 361 SUPERFAMILY SSF48600 3 92 6.41E-20 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS11435 dcaff95834432970fc4092985913880f 361 PIRSF PIRSF001500 2 361 3.9E-141 T 28-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL504_RS01920 dfe37dbf14981de5b34c786b72b9f28f 496 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 2.9E-191 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL504_RS01920 dfe37dbf14981de5b34c786b72b9f28f 496 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 490 3.8E-218 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 SUPERFAMILY SSF55874 362 461 5.34E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 462 4.3E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 Pfam PF17200 Single Cache domain 2 48 192 2.6E-39 T 28-03-2018 IPR033480 Single Cache domain 2 AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 SMART SM01049 42 131 1.8E-31 T 28-03-2018 IPR033480 Single Cache domain 2 AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 Gene3D G3DSA:3.30.450.20 26 207 8.4E-45 T 28-03-2018 AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 SMART SM00387 368 463 3.1E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 PIRSF PIRSF037314 1 471 8.9E-175 T 28-03-2018 IPR017171 Signal transduction histidine kinase, MctS AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 Pfam PF07730 Histidine kinase 251 325 7.4E-17 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL504_RS02480 876ae82231fbaa22f8fe3b4d49bd71f3 472 Gene3D G3DSA:3.30.565.10 323 469 6.3E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16150 e1d7519113130022105212ef2eb49234 256 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 254 31.961 T 28-03-2018 IPR009777 Cell division protein ZapD AL504_RS16150 e1d7519113130022105212ef2eb49234 256 Gene3D G3DSA:1.10.3900.10 16 177 1.7E-58 T 28-03-2018 AL504_RS16150 e1d7519113130022105212ef2eb49234 256 Pfam PF07072 Cell division protein 22 230 3.3E-75 T 28-03-2018 IPR009777 Cell division protein ZapD AL504_RS16150 e1d7519113130022105212ef2eb49234 256 SUPERFAMILY SSF160950 6 254 1.83E-84 T 28-03-2018 IPR009777 Cell division protein ZapD AL504_RS16150 e1d7519113130022105212ef2eb49234 256 Gene3D G3DSA:2.60.440.10 178 254 6.5E-29 T 28-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain AL504_RS09730 54c599e40b3d47907e3b05524e127150 93 Gene3D G3DSA:1.10.260.40 6 85 2.1E-5 T 28-03-2018 AL504_RS21000 3929ebc88f0756f3f6a36d709e29004e 189 Pfam PF04093 rod shape-determining protein MreD 45 168 2.2E-12 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL504_RS21000 3929ebc88f0756f3f6a36d709e29004e 189 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 34 174 3.2E-22 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL504_RS21000 3929ebc88f0756f3f6a36d709e29004e 189 PIRSF PIRSF018472 24 183 2.5E-33 T 28-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AL504_RS12035 a4b48d776b6251dca44dd262d80644f9 306 SUPERFAMILY SSF46785 2 111 6.21E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12035 a4b48d776b6251dca44dd262d80644f9 306 SUPERFAMILY SSF53850 91 288 5.61E-38 T 28-03-2018 AL504_RS12035 a4b48d776b6251dca44dd262d80644f9 306 Gene3D G3DSA:3.40.190.10 183 262 2.1E-5 T 28-03-2018 AL504_RS12035 a4b48d776b6251dca44dd262d80644f9 306 Gene3D G3DSA:1.10.10.10 1 82 3.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12035 a4b48d776b6251dca44dd262d80644f9 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.8E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS12035 a4b48d776b6251dca44dd262d80644f9 306 Pfam PF03466 LysR substrate binding domain 89 287 7.1E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS12035 a4b48d776b6251dca44dd262d80644f9 306 Gene3D G3DSA:3.40.190.10 83 182 1.5E-21 T 28-03-2018 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 39 480 6.5E-156 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 31 534 4.1E-218 T 28-03-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 258 312 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 SUPERFAMILY SSF81442 27 534 9.16E-196 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 147 159 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 256 277 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 389 408 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 347 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 30 55 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 77 100 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 104 128 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 302 317 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 361 379 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 439 460 7.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS17815 640060cf166ee6c3eaa9f99e6490a2a4 535 Gene3D G3DSA:1.20.210.10 26 535 2.7E-223 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS19310 91b89442e5d2fbe880cfa562d3dd03f5 86 Pfam PF07235 Protein of unknown function (DUF1427) 2 83 2.5E-39 T 28-03-2018 IPR009872 Protein of unknown function DUF1427 AL504_RS19310 91b89442e5d2fbe880cfa562d3dd03f5 86 TIGRFAM TIGR03510 XapX: XapX domain 4 48 4.8E-19 T 28-03-2018 IPR020017 XapX domain AL504_RS29620 c424dd768a451b117ce2a54cebe83ce9 442 SUPERFAMILY SSF103473 230 434 5.36E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS29620 c424dd768a451b117ce2a54cebe83ce9 442 SUPERFAMILY SSF103473 2 183 5.36E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS29620 c424dd768a451b117ce2a54cebe83ce9 442 Gene3D G3DSA:1.20.1250.20 234 442 9.4E-23 T 28-03-2018 AL504_RS29620 c424dd768a451b117ce2a54cebe83ce9 442 Gene3D G3DSA:1.20.1250.20 1 188 5.2E-26 T 28-03-2018 AL504_RS29620 c424dd768a451b117ce2a54cebe83ce9 442 Pfam PF07690 Major Facilitator Superfamily 5 391 1.4E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 Pfam PF12802 MarR family 34 92 9.3E-13 T 28-03-2018 AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 Gene3D G3DSA:1.10.10.10 2 147 1.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 SUPERFAMILY SSF46785 5 143 1.37E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 SMART SM00347 28 128 3.0E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 2.5E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 2.5E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS14445 1998e72b4cdd1d044793846fcafbeef3 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 2.5E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 Gene3D G3DSA:3.90.105.10 21 55 1.1E-10 T 28-03-2018 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 SMART SM00852 174 312 3.1E-40 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 Gene3D G3DSA:2.40.340.10 325 392 1.9E-10 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 171 308 1.2E-27 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 SUPERFAMILY SSF53218 171 316 3.4E-40 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 Pfam PF00994 Probable molybdopterin binding domain 174 311 9.2E-28 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 SUPERFAMILY SSF63867 321 393 2.75E-11 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 Gene3D G3DSA:3.40.980.10 144 319 5.1E-51 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 161 9.2E-42 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 Gene3D G3DSA:2.170.190.11 56 135 9.4E-27 T 28-03-2018 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 Pfam PF03454 MoeA C-terminal region (domain IV) 327 384 1.5E-9 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 SUPERFAMILY SSF63882 1 170 3.4E-52 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS25460 3f829c6085c36c87c5c6f1dda0926dc2 401 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 247 281 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL504_RS22050 30d57ab1cb67a6fe8435103596283d21 159 Pfam PF03551 Transcriptional regulator PadR-like family 2 70 2.4E-17 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal AL504_RS22050 30d57ab1cb67a6fe8435103596283d21 159 Gene3D G3DSA:1.10.10.10 1 94 1.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22050 30d57ab1cb67a6fe8435103596283d21 159 SUPERFAMILY SSF46785 2 138 4.42E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04925 f7cc1634b9334f0ecf6c49bafe1202ac 206 SUPERFAMILY SSF52499 2 199 2.22E-57 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS04925 f7cc1634b9334f0ecf6c49bafe1202ac 206 Pfam PF00857 Isochorismatase family 23 195 8.0E-43 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS04925 f7cc1634b9334f0ecf6c49bafe1202ac 206 Gene3D G3DSA:3.40.50.850 5 206 8.6E-53 T 28-03-2018 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 Gene3D G3DSA:3.40.50.720 153 238 0.36 T 28-03-2018 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 240 1.7E-38 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 SUPERFAMILY SSF69055 303 395 1.83E-28 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 396 45.263 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 1.9E-39 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 SUPERFAMILY SSF55347 129 275 2.78E-62 T 28-03-2018 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 391 1.0E-141 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 PIRSF PIRSF006205 4 398 1.1E-144 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 Pfam PF13288 DXP reductoisomerase C-terminal domain 272 390 2.6E-39 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 Gene3D G3DSA:3.40.50.720 4 152 2.2E-45 T 28-03-2018 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 Gene3D G3DSA:1.10.1740.10 314 397 1.1E-26 T 28-03-2018 AL504_RS06170 fbdca85a33d27f4ffa37082164811646 399 SUPERFAMILY SSF51735 5 153 3.88E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16590 c82053cf801a4f6390a1573168e852ae 204 Gene3D G3DSA:3.40.50.150 6 197 2.0E-22 T 28-03-2018 AL504_RS16590 c82053cf801a4f6390a1573168e852ae 204 SUPERFAMILY SSF53335 13 199 1.79E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS16590 c82053cf801a4f6390a1573168e852ae 204 Pfam PF07021 Methionine biosynthesis protein MetW 14 200 9.6E-77 T 28-03-2018 IPR010743 Methionine biosynthesis MetW AL504_RS16590 c82053cf801a4f6390a1573168e852ae 204 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 14 201 4.0E-89 T 28-03-2018 IPR010743 Methionine biosynthesis MetW AL504_RS13595 5e24b44d824622ec83cc3775905164f9 287 SMART SM00346 25 114 4.1E-23 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS13595 5e24b44d824622ec83cc3775905164f9 287 Gene3D G3DSA:1.10.10.10 6 85 5.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13595 5e24b44d824622ec83cc3775905164f9 287 Pfam PF09339 IclR helix-turn-helix domain 28 77 3.1E-16 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS13595 5e24b44d824622ec83cc3775905164f9 287 Gene3D G3DSA:3.30.450.40 97 274 1.0E-47 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13595 5e24b44d824622ec83cc3775905164f9 287 SUPERFAMILY SSF55781 82 267 7.85E-47 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13595 5e24b44d824622ec83cc3775905164f9 287 SUPERFAMILY SSF46785 25 96 4.77E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13595 5e24b44d824622ec83cc3775905164f9 287 Pfam PF01614 Bacterial transcriptional regulator 143 262 4.6E-32 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 SUPERFAMILY SSF48179 610 699 4.76E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 303 478 3.0E-60 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Gene3D G3DSA:3.90.226.10 1 256 1.3E-60 T 28-03-2018 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 SUPERFAMILY SSF52096 10 292 5.77E-66 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 SUPERFAMILY SSF48179 482 585 3.06E-26 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 SUPERFAMILY SSF51735 300 478 2.75E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Gene3D G3DSA:3.40.50.720 257 481 2.2E-61 T 28-03-2018 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 195 8.9E-35 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 614 697 8.6E-7 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 483 576 4.0E-23 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Gene3D G3DSA:1.10.1040.10 607 701 6.7E-18 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS01730 349cbff0b101395bf3ccf6afb9204843 706 Gene3D G3DSA:1.10.1040.10 482 581 1.7E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS24470 d7de896ced4a3060cf550dc20d23dcab 296 Gene3D G3DSA:3.40.190.10 178 266 1.7E-27 T 28-03-2018 AL504_RS24470 d7de896ced4a3060cf550dc20d23dcab 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24470 d7de896ced4a3060cf550dc20d23dcab 296 Pfam PF03466 LysR substrate binding domain 92 295 2.7E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24470 d7de896ced4a3060cf550dc20d23dcab 296 Gene3D G3DSA:3.40.190.10 90 177 9.0E-16 T 28-03-2018 AL504_RS24470 d7de896ced4a3060cf550dc20d23dcab 296 SUPERFAMILY SSF53850 92 296 2.04E-50 T 28-03-2018 AL504_RS24470 d7de896ced4a3060cf550dc20d23dcab 296 SUPERFAMILY SSF46785 9 113 1.99E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24470 d7de896ced4a3060cf550dc20d23dcab 296 Gene3D G3DSA:1.10.10.10 5 89 1.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22250 e0e6cc41c43a66826f98afb8091f4aa5 338 Gene3D G3DSA:3.40.190.10 140 223 1.6E-16 T 28-03-2018 AL504_RS22250 e0e6cc41c43a66826f98afb8091f4aa5 338 Gene3D G3DSA:3.40.190.10 24 139 4.0E-11 T 28-03-2018 AL504_RS22250 e0e6cc41c43a66826f98afb8091f4aa5 338 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 1.2E-25 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS22250 e0e6cc41c43a66826f98afb8091f4aa5 338 SMART SM00062 34 263 5.8E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS22250 e0e6cc41c43a66826f98afb8091f4aa5 338 SUPERFAMILY SSF53850 25 257 6.12E-42 T 28-03-2018 AL504_RS22250 e0e6cc41c43a66826f98afb8091f4aa5 338 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS07200 19255d116f09023e53dd14d61792a51c 142 Pfam PF14832 Putative oxalocrotonate tautomerase enzyme 1 134 5.1E-50 T 28-03-2018 IPR028116 Putative oxalocrotonate tautomerase AL504_RS07200 19255d116f09023e53dd14d61792a51c 142 SUPERFAMILY SSF55331 1 116 8.61E-7 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL504_RS07200 19255d116f09023e53dd14d61792a51c 142 Gene3D G3DSA:3.30.429.10 1 137 1.0E-39 T 28-03-2018 AL504_RS05235 2cc9ddc19eb883c977adadccca626187 256 Pfam PF00005 ABC transporter 20 157 1.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05235 2cc9ddc19eb883c977adadccca626187 256 Gene3D G3DSA:3.40.50.300 1 237 3.8E-58 T 28-03-2018 AL504_RS05235 2cc9ddc19eb883c977adadccca626187 256 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05235 2cc9ddc19eb883c977adadccca626187 256 SMART SM00382 27 208 4.9E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS05235 2cc9ddc19eb883c977adadccca626187 256 SUPERFAMILY SSF52540 3 213 3.12E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09835 b19de864113c69412f81afd8e4acec6b 86 Pfam PF12728 Helix-turn-helix domain 17 65 1.2E-6 T 28-03-2018 AL504_RS09835 b19de864113c69412f81afd8e4acec6b 86 Gene3D G3DSA:1.10.10.10 19 77 6.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17140 b5424b358331e65f2486c1e549dd9b50 262 SUPERFAMILY SSF51366 1 261 6.36E-87 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS17140 b5424b358331e65f2486c1e549dd9b50 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AL504_RS17140 b5424b358331e65f2486c1e549dd9b50 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.095 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL504_RS17140 b5424b358331e65f2486c1e549dd9b50 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 257 1.1E-92 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL504_RS17140 b5424b358331e65f2486c1e549dd9b50 262 Gene3D G3DSA:3.20.20.70 11 262 8.1E-73 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS30575 1be8509939ff36dedb5aa97bd01bc144 429 PRINTS PR00447 Natural resistance-associated macrophage protein signature 104 130 8.3E-38 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL504_RS30575 1be8509939ff36dedb5aa97bd01bc144 429 PRINTS PR00447 Natural resistance-associated macrophage protein signature 311 330 8.3E-38 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL504_RS30575 1be8509939ff36dedb5aa97bd01bc144 429 PRINTS PR00447 Natural resistance-associated macrophage protein signature 157 178 8.3E-38 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL504_RS30575 1be8509939ff36dedb5aa97bd01bc144 429 PRINTS PR00447 Natural resistance-associated macrophage protein signature 132 151 8.3E-38 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL504_RS30575 1be8509939ff36dedb5aa97bd01bc144 429 PRINTS PR00447 Natural resistance-associated macrophage protein signature 209 232 8.3E-38 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL504_RS30575 1be8509939ff36dedb5aa97bd01bc144 429 PRINTS PR00447 Natural resistance-associated macrophage protein signature 372 391 8.3E-38 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL504_RS30575 1be8509939ff36dedb5aa97bd01bc144 429 Pfam PF01566 Natural resistance-associated macrophage protein 45 401 4.9E-95 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 Pfam PF02357 Transcription termination factor nusG 3 108 2.7E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.6E-20 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.6E-20 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.6E-20 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 SMART SM00739 123 150 4.8E-6 T 28-03-2018 IPR005824 KOW AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 SUPERFAMILY SSF50104 121 176 8.53E-20 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.873 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 SUPERFAMILY SSF82679 3 113 2.22E-38 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 Pfam PF00467 KOW motif 126 158 2.6E-7 T 28-03-2018 IPR005824 KOW AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 Gene3D G3DSA:2.30.30.30 118 177 1.2E-21 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 SMART SM00738 2 111 5.5E-48 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.7E-69 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL504_RS19610 1044b1b101d2db242c2be4e16a7a7394 177 Gene3D G3DSA:3.30.70.940 2 115 2.4E-43 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL504_RS16395 486d8a1058726e3e833ac7dceedf3b5c 277 Gene3D G3DSA:3.40.190.10 30 150 1.3E-14 T 28-03-2018 AL504_RS16395 486d8a1058726e3e833ac7dceedf3b5c 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 262 2.5E-14 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS16395 486d8a1058726e3e833ac7dceedf3b5c 277 Gene3D G3DSA:3.40.190.10 151 227 0.052 T 28-03-2018 AL504_RS16395 486d8a1058726e3e833ac7dceedf3b5c 277 SUPERFAMILY SSF53850 9 256 2.93E-23 T 28-03-2018 AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 Gene3D G3DSA:2.40.50.140 1 67 1.8E-27 T 28-03-2018 AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 PIRSF PIRSF002599 1 67 4.6E-23 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 7.0E-29 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-14 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 PRINTS PR00050 Cold shock protein signature 40 58 1.8E-14 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 PRINTS PR00050 Cold shock protein signature 25 34 1.8E-14 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 SUPERFAMILY SSF50249 1 66 6.37E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS31190 b765a7a75fd1a21a9a0fd23cd72eae2c 67 SMART SM00357 3 67 1.2E-29 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL504_RS30765 698a5d6da9820587e96ea7d87f623835 404 Gene3D G3DSA:3.40.640.10 50 288 5.0E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS30765 698a5d6da9820587e96ea7d87f623835 404 SUPERFAMILY SSF53383 6 400 7.29E-85 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS30765 698a5d6da9820587e96ea7d87f623835 404 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 7 400 1.1E-185 T 28-03-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 AL504_RS30765 698a5d6da9820587e96ea7d87f623835 404 Gene3D G3DSA:3.90.1150.10 289 404 4.3E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS30765 698a5d6da9820587e96ea7d87f623835 404 Pfam PF00155 Aminotransferase class I and II 39 395 1.6E-45 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 23 212 4.0E-69 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 Gene3D G3DSA:3.30.70.1530 43 109 3.0E-17 T 28-03-2018 AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 Pfam PF01514 Secretory protein of YscJ/FliF family 29 204 2.2E-32 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 109 2.4E-27 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 136 149 2.4E-27 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 131 2.4E-27 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 45 55 2.4E-27 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL504_RS15365 07e88cae18b6b7732f48885649f87636 281 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 184 196 2.4E-27 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL504_RS04150 b2a5f5ac71ea0d51df6f28b8b0a53af6 110 Pfam PF10262 Rdx family 13 86 6.1E-35 T 28-03-2018 IPR011893 Selenoprotein, Rdx type AL504_RS04150 b2a5f5ac71ea0d51df6f28b8b0a53af6 110 SUPERFAMILY SSF52833 11 95 1.32E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS04150 b2a5f5ac71ea0d51df6f28b8b0a53af6 110 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 14 85 3.8E-21 T 28-03-2018 IPR011893 Selenoprotein, Rdx type AL504_RS04150 b2a5f5ac71ea0d51df6f28b8b0a53af6 110 Gene3D G3DSA:3.40.30.10 1 103 3.0E-43 T 28-03-2018 AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 Pfam PF00202 Aminotransferase class-III 25 438 3.1E-89 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 Gene3D G3DSA:3.90.1150.10 328 442 6.3E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 SUPERFAMILY SSF53383 13 438 2.45E-120 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 PIRSF PIRSF000521 30 147 5.4E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 PIRSF PIRSF000521 192 441 6.9E-15 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 Gene3D G3DSA:3.90.1150.10 5 77 0.0036 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS11975 c4dc7dbe54ee115c7850804a29f6cea8 442 Gene3D G3DSA:3.40.640.10 78 327 6.0E-70 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS18360 73450849681c201c60e486e9808fab77 435 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 257 9.8E-50 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AL504_RS18360 73450849681c201c60e486e9808fab77 435 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 2 305 6.2E-67 T 28-03-2018 IPR014150 Conjugal transfer, TrbL AL504_RS24265 7ebbeba2912164e32f1bf0079f7d2a5e 336 Gene3D G3DSA:1.20.1510.10 18 261 2.5E-50 T 28-03-2018 AL504_RS24265 7ebbeba2912164e32f1bf0079f7d2a5e 336 SUPERFAMILY SSF161111 194 262 1.07E-50 T 28-03-2018 AL504_RS24265 7ebbeba2912164e32f1bf0079f7d2a5e 336 SUPERFAMILY SSF161111 16 149 1.07E-50 T 28-03-2018 AL504_RS24265 7ebbeba2912164e32f1bf0079f7d2a5e 336 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 331 7.0E-67 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL504_RS24265 7ebbeba2912164e32f1bf0079f7d2a5e 336 Pfam PF01545 Cation efflux family 26 261 2.4E-34 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 123 3.1E-37 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 Gene3D G3DSA:3.30.1490.20 141 193 1.3E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 SUPERFAMILY SSF52440 1 125 1.15E-33 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 SUPERFAMILY SSF56059 127 314 3.54E-58 T 28-03-2018 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 315 5.4E-122 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 Gene3D G3DSA:3.30.470.20 194 303 2.1E-16 T 28-03-2018 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 127 300 5.5E-74 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 Gene3D G3DSA:3.40.50.20 1 132 1.9E-42 T 28-03-2018 AL504_RS08405 42203e84ad0ed8fe11b5360b55b39a47 326 Hamap MF_00162 Glutathione synthetase [gshB]. 1 319 154.786 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 SUPERFAMILY SSF52402 621 653 3.72E-63 T 28-03-2018 AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 SUPERFAMILY SSF52402 330 581 3.72E-63 T 28-03-2018 AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 Pfam PF02540 NAD synthase 351 526 1.5E-25 T 28-03-2018 IPR022310 NAD/GMP synthase AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 PIRSF PIRSF006630 11 675 1.1E-156 T 28-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 Pfam PF00795 Carbon-nitrogen hydrolase 22 282 1.1E-17 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 SUPERFAMILY SSF56317 13 297 4.58E-48 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 Gene3D G3DSA:3.60.110.10 8 359 5.1E-85 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 Gene3D G3DSA:3.40.50.620 360 675 1.4E-51 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS06875 0c5e3387abca36c5ef687b232b69d5ae 688 TIGRFAM TIGR00552 nadE: NAD+ synthetase 355 525 2.7E-20 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AL504_RS07030 cf5cb25d500839035da09cb223af861e 318 Gene3D G3DSA:3.20.20.70 3 318 7.8E-26 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS07030 cf5cb25d500839035da09cb223af861e 318 Pfam PF03060 Nitronate monooxygenase 11 87 1.6E-11 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS07030 cf5cb25d500839035da09cb223af861e 318 Pfam PF03060 Nitronate monooxygenase 90 317 1.7E-12 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS07030 cf5cb25d500839035da09cb223af861e 318 SUPERFAMILY SSF51412 10 313 2.56E-32 T 28-03-2018 AL504_RS25095 2707f5af07cbd6501f6f3f0db4c370d7 416 Gene3D G3DSA:3.90.1150.10 294 416 4.1E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS25095 2707f5af07cbd6501f6f3f0db4c370d7 416 Hamap MF_01970 Kynureninase [kynU]. 3 399 34.762 T 28-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AL504_RS25095 2707f5af07cbd6501f6f3f0db4c370d7 416 Gene3D G3DSA:3.40.640.10 41 293 1.8E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS25095 2707f5af07cbd6501f6f3f0db4c370d7 416 SUPERFAMILY SSF53383 3 400 2.67E-86 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS25095 2707f5af07cbd6501f6f3f0db4c370d7 416 Pfam PF00266 Aminotransferase class-V 80 349 6.4E-13 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS25095 2707f5af07cbd6501f6f3f0db4c370d7 416 TIGRFAM TIGR01814 kynureninase: kynureninase 9 400 4.2E-104 T 28-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AL504_RS25095 2707f5af07cbd6501f6f3f0db4c370d7 416 PIRSF PIRSF038800 1 407 2.2E-145 T 28-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AL504_RS20475 5d2f2ca1a5245101ce91226dbadab303 279 SMART SM00382 45 243 1.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS20475 5d2f2ca1a5245101ce91226dbadab303 279 Gene3D G3DSA:3.40.50.300 17 259 1.1E-58 T 28-03-2018 AL504_RS20475 5d2f2ca1a5245101ce91226dbadab303 279 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS20475 5d2f2ca1a5245101ce91226dbadab303 279 SUPERFAMILY SSF52540 19 252 1.51E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20475 5d2f2ca1a5245101ce91226dbadab303 279 Pfam PF00005 ABC transporter 37 186 2.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29355 146fc7d27e8e6bfd964ca2e2a2cb37bd 566 SUPERFAMILY SSF56935 186 361 3.84E-8 T 28-03-2018 AL504_RS29355 146fc7d27e8e6bfd964ca2e2a2cb37bd 566 SUPERFAMILY SSF56935 409 538 3.84E-8 T 28-03-2018 AL504_RS29355 146fc7d27e8e6bfd964ca2e2a2cb37bd 566 Gene3D G3DSA:2.40.160.10 100 566 3.4E-39 T 28-03-2018 AL504_RS29355 146fc7d27e8e6bfd964ca2e2a2cb37bd 566 Pfam PF16930 Putative porin 34 566 3.0E-216 T 28-03-2018 IPR032638 Putative bacterial porin AL504_RS11360 516b169514b82dfe8c7f6c73db7bce89 349 Pfam PF04199 Putative cyclase 88 277 4.8E-13 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS11360 516b169514b82dfe8c7f6c73db7bce89 349 SUPERFAMILY SSF102198 97 117 2.62E-11 T 28-03-2018 AL504_RS11360 516b169514b82dfe8c7f6c73db7bce89 349 SUPERFAMILY SSF102198 170 348 2.62E-11 T 28-03-2018 AL504_RS11360 516b169514b82dfe8c7f6c73db7bce89 349 Gene3D G3DSA:3.50.30.50 41 349 2.8E-45 T 28-03-2018 AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 Gene3D G3DSA:1.10.10.10 2 90 8.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 SUPERFAMILY SSF53850 92 291 1.05E-38 T 28-03-2018 AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 SUPERFAMILY SSF46785 5 115 2.94E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 Gene3D G3DSA:3.40.190.10 95 180 1.0E-22 T 28-03-2018 AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 Pfam PF03466 LysR substrate binding domain 92 288 4.1E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27820 b838389f38046d8885e8ba5380cddce2 299 Gene3D G3DSA:3.40.190.10 181 262 2.1E-12 T 28-03-2018 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 SUPERFAMILY SSF55271 1 106 1.7E-37 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 SUPERFAMILY SSF53150 108 272 9.29E-36 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 690 706 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Pfam PF05190 MutS family domain IV 431 522 2.2E-29 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Gene3D G3DSA:3.40.50.300 570 833 3.6E-40 T 28-03-2018 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Pfam PF05188 MutS domain II 121 245 1.1E-17 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Gene3D G3DSA:1.10.1420.10 411 538 4.1E-29 T 28-03-2018 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Gene3D G3DSA:1.10.1420.10 255 410 1.0E-34 T 28-03-2018 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Pfam PF05192 MutS domain III 262 562 2.3E-35 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Pfam PF00488 MutS domain V 613 799 3.5E-80 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 SUPERFAMILY SSF48334 259 568 5.36E-85 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 SUPERFAMILY SSF52540 570 799 3.62E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 PIRSF PIRSF037677 1 175 8.6E-20 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 PIRSF PIRSF037677 204 841 6.1E-114 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 SMART SM00534 609 796 1.8E-105 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 857 24.204 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 SMART SM00533 275 594 3.1E-89 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 863 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Gene3D G3DSA:3.40.1170.10 1 122 3.4E-39 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Gene3D G3DSA:3.30.420.110 123 254 2.9E-23 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL504_RS27775 bd4553639cdbdd96f3fade0ab673ec06 866 Pfam PF01624 MutS domain I 1 110 2.8E-38 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL504_RS27245 d3dccbce85add7f48fe0f35ac2e4e8cb 66 Pfam PF05751 FixH 8 39 6.2E-6 T 28-03-2018 IPR008620 Nitrogen fixation protein FixH AL504_RS01305 708ddc3921e3d672364c372ab4c27c03 200 SUPERFAMILY SSF48498 90 193 2.13E-16 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS01305 708ddc3921e3d672364c372ab4c27c03 200 SUPERFAMILY SSF46689 5 74 8.21E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS01305 708ddc3921e3d672364c372ab4c27c03 200 Gene3D G3DSA:1.10.357.10 65 195 1.8E-14 T 28-03-2018 AL504_RS01305 708ddc3921e3d672364c372ab4c27c03 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 2.4E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01305 708ddc3921e3d672364c372ab4c27c03 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01305 708ddc3921e3d672364c372ab4c27c03 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01305 708ddc3921e3d672364c372ab4c27c03 200 Gene3D G3DSA:1.10.10.60 1 64 3.3E-19 T 28-03-2018 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 Gene3D G3DSA:3.10.50.40 265 394 1.6E-40 T 28-03-2018 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 Gene3D G3DSA:3.10.50.40 396 521 0.0016 T 28-03-2018 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 SUPERFAMILY SSF54534 258 368 5.69E-29 T 28-03-2018 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 Gene3D G3DSA:1.10.4030.10 36 168 9.4E-25 T 28-03-2018 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 307 328 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 Gene3D G3DSA:1.10.3120.10 173 264 6.2E-4 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 Pfam PF13624 SurA N-terminal domain 1 162 4.1E-49 T 28-03-2018 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 Pfam PF00639 PPIC-type PPIASE domain 272 367 7.1E-27 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 SUPERFAMILY SSF109998 42 166 9.22E-33 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL504_RS05095 bf92974886858a70c20496723ac4f0ab 656 SUPERFAMILY SSF109998 200 236 9.22E-33 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL504_RS28080 237f866bdee414570ad2c1625001d9d1 257 Gene3D G3DSA:3.60.21.10 9 243 6.5E-23 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS28080 237f866bdee414570ad2c1625001d9d1 257 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 256 94.304 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL504_RS28080 237f866bdee414570ad2c1625001d9d1 257 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 13 229 6.2E-66 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL504_RS28080 237f866bdee414570ad2c1625001d9d1 257 Pfam PF00149 Calcineurin-like phosphoesterase 9 208 3.9E-8 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS28080 237f866bdee414570ad2c1625001d9d1 257 SUPERFAMILY SSF56300 10 249 6.08E-25 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 SUPERFAMILY SSF102824 2591 2680 1.39E-34 T 28-03-2018 AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 388 427 2.6E-6 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 570 610 2.6E-8 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 280 319 0.03 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 490 529 1.0E-5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 826 855 1.7 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 671 705 9.3E-7 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 354 383 0.19 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1392 1430 0.0071 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 745 766 0.0031 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 515 550 0.88 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 449 489 3.6E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 428 468 0.023 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 413 448 0.0013 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 469 510 7.1E-7 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 300 339 0.0084 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 706 744 0.13 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 612 649 6.0E-6 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 534 568 0.65 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 53 149 3.1E-21 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 414 463 0.25 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 821 863 16.0 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 355 408 0.012 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 595 650 64.0 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 673 736 0.57 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 1386 1449 3.3 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 464 510 0.034 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 515 581 4.2E-5 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05594 Haemagluttinin repeat 261 328 0.28 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Gene3D G3DSA:2.160.20.10 715 903 1.2E-4 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Gene3D G3DSA:2.160.20.10 21 316 1.0E-61 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Gene3D G3DSA:2.160.20.10 438 542 3.9E-4 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Gene3D G3DSA:2.160.20.10 1063 1447 2.7E-13 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Gene3D G3DSA:2.160.20.10 543 626 1.2E-7 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Gene3D G3DSA:2.160.20.10 318 437 1.5E-5 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF12106 Colicin E5 ribonuclease domain 2589 2676 2.2E-34 T 28-03-2018 IPR021964 Colicin ribonuclease domain GO:0004540 AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 SUPERFAMILY SSF51126 34 307 1.54E-60 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF13332 Haemagluttinin repeat 1847 2018 7.2E-39 T 28-03-2018 IPR025157 Hemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF13332 Haemagluttinin repeat 1543 1682 1.3E-10 T 28-03-2018 IPR025157 Hemagglutinin repeat AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 Pfam PF05860 haemagglutination activity domain 28 151 6.0E-32 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS20750 18f8cd2679976e486c36430a8f6e44b8 2680 SMART SM00912 34 154 1.8E-39 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 Pfam PF03466 LysR substrate binding domain 90 289 4.8E-29 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 SUPERFAMILY SSF53850 89 293 3.44E-28 T 28-03-2018 AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 3.9E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 Gene3D G3DSA:3.40.190.10 88 223 5.9E-20 T 28-03-2018 AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 SUPERFAMILY SSF46785 3 112 5.54E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03705 be020b9607906f684f8521a7d3633c2c 300 Gene3D G3DSA:1.10.10.10 1 86 1.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 SUPERFAMILY SSF52540 316 566 2.92E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 Gene3D G3DSA:3.40.50.300 9 298 7.1E-72 T 28-03-2018 AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 Gene3D G3DSA:3.40.50.300 312 595 7.7E-74 T 28-03-2018 AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 SUPERFAMILY SSF52540 12 268 1.55E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 Pfam PF00005 ABC transporter 343 493 8.8E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 Pfam PF00005 ABC transporter 33 196 7.6E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 SMART SM00382 351 543 3.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 SMART SM00382 41 246 3.3E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 277 3.1E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS29985 ac3ec9d4bdbe8011e92761e821386be2 617 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 546 591 1.1E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 Gene3D G3DSA:3.40.190.10 129 225 3.8E-24 T 28-03-2018 AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 SUPERFAMILY SSF53850 128 343 8.26E-40 T 28-03-2018 AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 Gene3D G3DSA:3.40.190.10 226 309 6.0E-15 T 28-03-2018 AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 Gene3D G3DSA:1.10.10.10 36 123 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 58 69 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 69 79 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 79 90 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 Pfam PF03466 LysR substrate binding domain 127 338 2.1E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 SUPERFAMILY SSF46785 40 151 8.31E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23505 38f6184869d5a48be3456f6868808ade 350 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 43 100 6.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00545 7150404cabea2104246efe63cfc7ab01 222 Gene3D G3DSA:1.10.10.10 117 222 2.2E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00545 7150404cabea2104246efe63cfc7ab01 222 SMART SM00862 145 216 1.0E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS00545 7150404cabea2104246efe63cfc7ab01 222 Gene3D G3DSA:3.40.50.2300 1 116 3.7E-33 T 28-03-2018 AL504_RS00545 7150404cabea2104246efe63cfc7ab01 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.9E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS00545 7150404cabea2104246efe63cfc7ab01 222 SMART SM00448 1 112 1.5E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00545 7150404cabea2104246efe63cfc7ab01 222 Pfam PF00072 Response regulator receiver domain 3 112 9.9E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00545 7150404cabea2104246efe63cfc7ab01 222 SUPERFAMILY SSF52172 2 167 1.08E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS04060 52b476d0ef30258a60cd46c3e1e62963 177 Pfam PF07963 Prokaryotic N-terminal methylation motif 26 48 1.1E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04060 52b476d0ef30258a60cd46c3e1e62963 177 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04060 52b476d0ef30258a60cd46c3e1e62963 177 Gene3D G3DSA:3.55.40.10 58 177 2.5E-13 T 28-03-2018 AL504_RS04060 52b476d0ef30258a60cd46c3e1e62963 177 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 26 174 3.5E-29 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL504_RS04060 52b476d0ef30258a60cd46c3e1e62963 177 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 27 48 1.5E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04060 52b476d0ef30258a60cd46c3e1e62963 177 SUPERFAMILY SSF54523 29 114 5.34E-13 T 28-03-2018 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 69 294 3.3E-81 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 SUPERFAMILY SSF69189 314 406 5.49E-22 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 SMART SM00936 314 404 3.3E-29 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 Gene3D G3DSA:2.60.410.10 329 404 1.5E-18 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 101 112 2.2E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 171 2.2E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 181 194 2.2E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 SUPERFAMILY SSF56601 22 44 5.77E-86 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 SUPERFAMILY SSF56601 73 314 5.77E-86 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 314 404 7.7E-20 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS20495 1c29b5d7719698f098f0d6087daf2505 420 Gene3D G3DSA:3.40.710.10 28 328 3.8E-64 T 28-03-2018 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.1E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 1.1E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 1.1E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.1E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 1.1E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 Gene3D G3DSA:3.20.20.100 1 262 1.0E-81 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 PIRSF PIRSF000097 1 106 2.2E-32 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 PIRSF PIRSF000097 102 265 7.8E-34 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 SUPERFAMILY SSF51430 2 256 2.62E-78 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 Pfam PF00248 Aldo/keto reductase family 16 184 3.5E-35 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS24495 03dc987c0c8fcd986a36b47e903bbec4 267 Pfam PF00248 Aldo/keto reductase family 188 251 3.5E-10 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS22095 5386d56a418149beba83e69121028fd8 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 458 5.1E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22095 5386d56a418149beba83e69121028fd8 468 SMART SM00388 232 302 7.7E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS22095 5386d56a418149beba83e69121028fd8 468 SUPERFAMILY SSF47384 215 301 4.71E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS22095 5386d56a418149beba83e69121028fd8 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 301 2.5E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS22095 5386d56a418149beba83e69121028fd8 468 Gene3D G3DSA:3.30.565.10 297 458 3.4E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22095 5386d56a418149beba83e69121028fd8 468 SMART SM00387 346 459 1.2E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22095 5386d56a418149beba83e69121028fd8 468 Gene3D G3DSA:1.10.287.130 223 296 1.4E-10 T 28-03-2018 AL504_RS22095 5386d56a418149beba83e69121028fd8 468 SUPERFAMILY SSF55874 292 457 1.83E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22095 5386d56a418149beba83e69121028fd8 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 8.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS22095 5386d56a418149beba83e69121028fd8 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 8.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS22095 5386d56a418149beba83e69121028fd8 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 8.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS20180 f53bf5720e6ac15ab776fe6bfccab9d4 372 Gene3D G3DSA:3.30.360.10 138 301 1.9E-25 T 28-03-2018 AL504_RS20180 f53bf5720e6ac15ab776fe6bfccab9d4 372 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 101 7.6E-16 T 28-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AL504_RS20180 f53bf5720e6ac15ab776fe6bfccab9d4 372 Gene3D G3DSA:3.40.50.720 6 137 2.8E-17 T 28-03-2018 AL504_RS20180 f53bf5720e6ac15ab776fe6bfccab9d4 372 SUPERFAMILY SSF51735 6 178 7.69E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20180 f53bf5720e6ac15ab776fe6bfccab9d4 372 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 123 343 1.5E-14 T 28-03-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AL504_RS20180 f53bf5720e6ac15ab776fe6bfccab9d4 372 SUPERFAMILY SSF55347 124 360 2.22E-60 T 28-03-2018 AL504_RS29625 577bbe816f2f013ee780aa6e74bd1a78 311 Pfam PF03466 LysR substrate binding domain 99 303 2.0E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS29625 577bbe816f2f013ee780aa6e74bd1a78 311 Gene3D G3DSA:3.40.190.10 99 184 2.2E-15 T 28-03-2018 AL504_RS29625 577bbe816f2f013ee780aa6e74bd1a78 311 Gene3D G3DSA:3.40.190.10 185 271 8.2E-26 T 28-03-2018 AL504_RS29625 577bbe816f2f013ee780aa6e74bd1a78 311 SUPERFAMILY SSF46785 17 123 4.77E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29625 577bbe816f2f013ee780aa6e74bd1a78 311 Gene3D G3DSA:1.10.10.10 7 98 2.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29625 577bbe816f2f013ee780aa6e74bd1a78 311 SUPERFAMILY SSF53850 100 306 6.52E-47 T 28-03-2018 AL504_RS29625 577bbe816f2f013ee780aa6e74bd1a78 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 74 1.7E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 SUPERFAMILY SSF53623 480 715 3.4E-31 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 Gene3D G3DSA:3.90.190.20 724 871 1.7E-14 T 28-03-2018 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 SUPERFAMILY SSF56059 219 494 1.45E-33 T 28-03-2018 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 Gene3D G3DSA:3.40.1190.10 469 717 1.7E-44 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 Gene3D G3DSA:3.30.470.20 289 467 8.0E-19 T 28-03-2018 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 Gene3D G3DSA:3.30.1490.20 197 288 8.9E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 Pfam PF08245 Mur ligase middle domain 486 698 7.7E-14 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 SUPERFAMILY SSF53244 726 867 1.28E-15 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 7 868 0.0 T 28-03-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 AL504_RS11515 1609c596d9d716db1586f23126b29a4e 871 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 219 304 1.5E-6 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS22710 daaea7744efcf098b2a00916133f720c 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 141 166 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS22710 daaea7744efcf098b2a00916133f720c 446 SUPERFAMILY SSF103473 24 440 2.22E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS22710 daaea7744efcf098b2a00916133f720c 446 Gene3D G3DSA:1.20.1250.20 28 242 2.7E-26 T 28-03-2018 AL504_RS22710 daaea7744efcf098b2a00916133f720c 446 Pfam PF07690 Major Facilitator Superfamily 37 406 4.3E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS22710 daaea7744efcf098b2a00916133f720c 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS22710 daaea7744efcf098b2a00916133f720c 446 Gene3D G3DSA:1.20.1250.20 243 446 6.6E-23 T 28-03-2018 AL504_RS14740 49c1fd76e0646c204ad99160bf528d92 274 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 253 24.716 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 AL504_RS14740 49c1fd76e0646c204ad99160bf528d92 274 Pfam PF08478 POTRA domain, FtsQ-type 53 110 8.9E-14 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type AL504_RS14740 49c1fd76e0646c204ad99160bf528d92 274 Pfam PF03799 Cell division protein FtsQ 114 245 1.6E-23 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Gene3D G3DSA:1.10.540.10 26 159 2.3E-18 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 SUPERFAMILY SSF56645 38 280 4.71E-59 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 446 2.5E-28 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 4.0E-15 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 64 156 2.3E-13 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 SUPERFAMILY SSF47203 281 456 1.53E-47 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Gene3D G3DSA:1.20.140.10 277 458 4.2E-47 T 28-03-2018 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 589 6.2E-26 T 28-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Gene3D G3DSA:2.40.110.10 160 272 7.7E-25 T 28-03-2018 AL504_RS18295 09ed397a71477e03c662a87f38c6a245 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 5.7E-10 T 28-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AL504_RS15255 783c3d26f36bcf52a9d07285563bae9a 311 SUPERFAMILY SSF55811 15 123 8.72E-8 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS15255 783c3d26f36bcf52a9d07285563bae9a 311 Gene3D G3DSA:3.90.79.10 6 228 1.3E-26 T 28-03-2018 AL504_RS15255 783c3d26f36bcf52a9d07285563bae9a 311 SUPERFAMILY SSF46785 228 299 1.77E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15255 783c3d26f36bcf52a9d07285563bae9a 311 PIRSF PIRSF019423 2 310 3.3E-147 T 28-03-2018 IPR011213 Nicotinic acid mononucleotide biosynthesis protein AL504_RS15255 783c3d26f36bcf52a9d07285563bae9a 311 Gene3D G3DSA:1.10.10.10 229 299 2.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 SMART SM00382 32 219 2.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 Gene3D G3DSA:3.40.50.300 246 499 1.2E-30 T 28-03-2018 AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 SUPERFAMILY SSF52540 258 494 1.72E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 Pfam PF00005 ABC transporter 24 172 1.8E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 Pfam PF00005 ABC transporter 279 436 6.1E-13 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 SUPERFAMILY SSF52540 7 227 8.56E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19090 c16ced4f8e859f989c78390bb9e02ee5 509 Gene3D G3DSA:3.40.50.300 5 245 9.8E-51 T 28-03-2018 AL504_RS25445 d5253bb2df3b57eef39fed3ffdb69b82 358 SUPERFAMILY SSF53850 188 342 2.41E-10 T 28-03-2018 AL504_RS25445 d5253bb2df3b57eef39fed3ffdb69b82 358 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 86 1.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25445 d5253bb2df3b57eef39fed3ffdb69b82 358 Gene3D G3DSA:3.40.190.10 206 295 6.0E-6 T 28-03-2018 AL504_RS25445 d5253bb2df3b57eef39fed3ffdb69b82 358 Pfam PF12727 PBP superfamily domain 144 327 2.4E-49 T 28-03-2018 IPR024370 PBP domain AL504_RS25445 d5253bb2df3b57eef39fed3ffdb69b82 358 Gene3D G3DSA:1.10.10.10 6 125 4.4E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25445 d5253bb2df3b57eef39fed3ffdb69b82 358 Gene3D G3DSA:3.40.190.10 126 198 0.062 T 28-03-2018 AL504_RS25445 d5253bb2df3b57eef39fed3ffdb69b82 358 SUPERFAMILY SSF46785 20 142 1.63E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11415 8f735847b77b67117d82e58e434c9c27 229 Hamap MF_00238 Cytidylate kinase [cmk]. 13 227 32.218 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL504_RS11415 8f735847b77b67117d82e58e434c9c27 229 Gene3D G3DSA:3.40.50.300 11 226 2.1E-48 T 28-03-2018 AL504_RS11415 8f735847b77b67117d82e58e434c9c27 229 SUPERFAMILY SSF52540 13 225 4.3E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11415 8f735847b77b67117d82e58e434c9c27 229 Pfam PF02224 Cytidylate kinase 15 223 2.6E-71 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL504_RS11415 8f735847b77b67117d82e58e434c9c27 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 13 221 1.5E-71 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL504_RS04035 3e195d1ccb17f68a428d728cb7c064d8 192 SUPERFAMILY SSF48498 83 188 3.71E-18 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS04035 3e195d1ccb17f68a428d728cb7c064d8 192 Gene3D G3DSA:1.10.357.10 60 189 3.6E-29 T 28-03-2018 AL504_RS04035 3e195d1ccb17f68a428d728cb7c064d8 192 SUPERFAMILY SSF46689 5 88 6.16E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04035 3e195d1ccb17f68a428d728cb7c064d8 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.4E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS04035 3e195d1ccb17f68a428d728cb7c064d8 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.4E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS04035 3e195d1ccb17f68a428d728cb7c064d8 192 Gene3D G3DSA:1.10.10.60 3 59 1.7E-13 T 28-03-2018 AL504_RS04035 3e195d1ccb17f68a428d728cb7c064d8 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.9E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06290 3e3ab74757854ace08ff21bd8715d733 117 Gene3D G3DSA:1.20.58.380 12 96 5.5E-26 T 28-03-2018 AL504_RS06290 3e3ab74757854ace08ff21bd8715d733 117 Pfam PF05400 Flagellar protein FliT 25 110 4.0E-21 T 28-03-2018 IPR008622 Flagellar protein FliT AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 169 244 1.6E-21 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 SUPERFAMILY SSF51126 147 252 1.6E-38 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 SUPERFAMILY SSF51126 285 410 1.6E-38 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 SUPERFAMILY SSF51126 468 493 1.6E-38 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3937 4047 1.3E-39 T 28-03-2018 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 Pfam PF05860 haemagglutination activity domain 150 248 3.3E-21 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 SMART SM00912 134 248 2.8E-26 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 Gene3D G3DSA:2.160.20.10 1018 1876 2.8E-5 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 Gene3D G3DSA:2.160.20.10 646 1004 3.9E-8 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 Gene3D G3DSA:2.160.20.10 131 441 5.2E-41 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 Gene3D G3DSA:2.160.20.10 463 645 0.043 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS00500 f36886340317dbec1fed3ae5ba3401a8 4151 Gene3D G3DSA:2.160.20.10 2439 2742 0.11 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS17740 4cc265937b8103dd83fef4bdf5ac3c56 357 Pfam PF13439 Glycosyltransferase Family 4 13 149 1.9E-12 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS17740 4cc265937b8103dd83fef4bdf5ac3c56 357 SUPERFAMILY SSF53756 2 349 1.77E-56 T 28-03-2018 AL504_RS17740 4cc265937b8103dd83fef4bdf5ac3c56 357 Gene3D G3DSA:3.40.50.2000 166 333 7.0E-30 T 28-03-2018 AL504_RS17740 4cc265937b8103dd83fef4bdf5ac3c56 357 Gene3D G3DSA:3.40.50.2000 1 165 1.8E-12 T 28-03-2018 AL504_RS17740 4cc265937b8103dd83fef4bdf5ac3c56 357 Pfam PF00534 Glycosyl transferases group 1 172 326 2.1E-22 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 SUPERFAMILY SSF56322 37 376 4.19E-105 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 PRINTS PR00095 Anthranilate synthase component I signature 328 342 2.0E-14 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 PRINTS PR00095 Anthranilate synthase component I signature 313 327 2.0E-14 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 PRINTS PR00095 Anthranilate synthase component I signature 220 233 2.0E-14 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 PRINTS PR00095 Anthranilate synthase component I signature 234 247 2.0E-14 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 Pfam PF00425 chorismate binding enzyme 119 372 1.2E-87 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 Gene3D G3DSA:3.60.120.10 10 378 8.5E-114 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL504_RS14000 0b4ec8172314341e8272db06eae7e18f 378 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 102 376 1.1E-108 T 28-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 Gene3D G3DSA:2.40.170.20 281 836 1.6E-96 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 169 835 5.4E-132 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 SUPERFAMILY SSF56935 125 836 2.02E-149 T 28-03-2018 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 Gene3D G3DSA:2.170.130.10 127 275 3.2E-32 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 Pfam PF07715 TonB-dependent Receptor Plug Domain 168 268 8.3E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 Pfam PF00593 TonB dependent receptor 341 835 8.6E-69 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 SMART SM00965 71 122 1.2E-12 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS11660 89fe18b372d2349f3e6e00766c5634bb 836 Pfam PF07660 Secretin and TonB N terminus short domain 73 121 6.1E-8 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 SUPERFAMILY SSF54980 399 493 1.34E-26 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 SUPERFAMILY SSF52540 2 205 3.28E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 3.0E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 2.4E-297 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Gene3D G3DSA:3.30.70.240 391 549 5.8E-27 T 28-03-2018 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 SUPERFAMILY SSF50447 165 288 1.85E-29 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 SMART SM00838 398 486 0.0011 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 300.742 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Gene3D G3DSA:3.40.50.300 1 190 2.2E-36 T 28-03-2018 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 3.4E-48 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Pfam PF00679 Elongation factor G C-terminus 399 479 3.5E-22 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 SUPERFAMILY SSF54980 292 370 9.35E-19 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Gene3D G3DSA:2.40.30.10 191 287 6.5E-23 T 28-03-2018 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Gene3D G3DSA:3.30.70.870 288 367 2.2E-27 T 28-03-2018 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.4E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.4E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.4E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.4E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.4E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 175 4.8E-19 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS12115 c9ca69e4320bac26c2a73c97d8d80fed 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.4E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS03270 7f2a5c4b2fac3f77dcd70205a70ca9b7 274 SUPERFAMILY SSF52540 16 242 7.48E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03270 7f2a5c4b2fac3f77dcd70205a70ca9b7 274 SMART SM00382 41 229 3.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03270 7f2a5c4b2fac3f77dcd70205a70ca9b7 274 Pfam PF00005 ABC transporter 32 180 5.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03270 7f2a5c4b2fac3f77dcd70205a70ca9b7 274 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03270 7f2a5c4b2fac3f77dcd70205a70ca9b7 274 Gene3D G3DSA:3.40.50.300 5 254 1.5E-66 T 28-03-2018 AL504_RS15435 b3d6c7c6c06c71b6890b6bf52104ac7b 119 SUPERFAMILY SSF48452 4 108 9.17E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15435 b3d6c7c6c06c71b6890b6bf52104ac7b 119 Gene3D G3DSA:1.25.40.10 2 56 8.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15435 b3d6c7c6c06c71b6890b6bf52104ac7b 119 Gene3D G3DSA:1.25.40.10 57 112 1.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS11330 804ca2a07d49a62701d5d608cdf34a00 605 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 28 548 1.7E-225 T 28-03-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL504_RS11330 804ca2a07d49a62701d5d608cdf34a00 605 SUPERFAMILY SSF53383 396 527 3.21E-47 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS11330 804ca2a07d49a62701d5d608cdf34a00 605 SUPERFAMILY SSF53383 135 359 3.21E-47 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS11330 804ca2a07d49a62701d5d608cdf34a00 605 Gene3D G3DSA:3.90.1150.10 387 546 3.0E-13 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS11330 804ca2a07d49a62701d5d608cdf34a00 605 Pfam PF00155 Aminotransferase class I and II 204 529 4.2E-25 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS11330 804ca2a07d49a62701d5d608cdf34a00 605 Gene3D G3DSA:3.40.640.10 161 386 6.0E-26 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Pfam PF14559 Tetratricopeptide repeat 560 617 1.4E-7 T 28-03-2018 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Gene3D G3DSA:1.25.40.10 93 269 2.4E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Pfam PF13432 Tetratricopeptide repeat 500 548 1.3E-6 T 28-03-2018 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Pfam PF13432 Tetratricopeptide repeat 332 401 7.7E-4 T 28-03-2018 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Gene3D G3DSA:1.20.58.280 516 536 6.4E-4 T 28-03-2018 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SUPERFAMILY SSF48452 227 402 5.8E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Gene3D G3DSA:1.25.40.10 279 346 1.1E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Gene3D G3DSA:1.25.40.10 347 389 1.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Gene3D G3DSA:1.25.40.10 390 430 0.039 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Gene3D G3DSA:1.25.40.10 431 515 7.7E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SMART SM00028 328 361 170.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SMART SM00028 581 614 0.2 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SMART SM00028 479 512 18.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SMART SM00028 513 547 15.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SMART SM00028 227 260 31.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SMART SM00028 410 443 150.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 Gene3D G3DSA:1.25.40.10 537 626 8.1E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23255 4abb8970053d9fb42a74c7333acc3d59 628 SUPERFAMILY SSF48452 450 616 2.13E-24 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS05505 e4416bb86307d570cc1bd00be6c21a08 320 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05505 e4416bb86307d570cc1bd00be6c21a08 320 SUPERFAMILY SSF52540 12 236 2.61E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05505 e4416bb86307d570cc1bd00be6c21a08 320 SMART SM00382 40 237 2.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS05505 e4416bb86307d570cc1bd00be6c21a08 320 Gene3D G3DSA:3.40.50.300 2 242 2.2E-65 T 28-03-2018 AL504_RS05505 e4416bb86307d570cc1bd00be6c21a08 320 Pfam PF00005 ABC transporter 32 173 2.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS00265 45f4162f5a87244ed54e8bb3c16d997d 243 Pfam PF00106 short chain dehydrogenase 4 84 5.9E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00265 45f4162f5a87244ed54e8bb3c16d997d 243 Gene3D G3DSA:3.40.50.720 2 237 1.2E-35 T 28-03-2018 AL504_RS00265 45f4162f5a87244ed54e8bb3c16d997d 243 SUPERFAMILY SSF51735 3 212 1.25E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS00265 45f4162f5a87244ed54e8bb3c16d997d 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 9.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00265 45f4162f5a87244ed54e8bb3c16d997d 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 9.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00265 45f4162f5a87244ed54e8bb3c16d997d 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00265 45f4162f5a87244ed54e8bb3c16d997d 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 9.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS17670 4584b962830fbc44842fc6a3caf4a36e 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 151 2.6E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS17670 4584b962830fbc44842fc6a3caf4a36e 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 46 710 2.6E-126 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS17670 4584b962830fbc44842fc6a3caf4a36e 713 SUPERFAMILY SSF56935 13 713 3.97E-134 T 28-03-2018 AL504_RS17670 4584b962830fbc44842fc6a3caf4a36e 713 Gene3D G3DSA:2.170.130.10 11 158 4.0E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS17670 4584b962830fbc44842fc6a3caf4a36e 713 Pfam PF00593 TonB dependent receptor 232 711 1.0E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS17670 4584b962830fbc44842fc6a3caf4a36e 713 Gene3D G3DSA:2.40.170.20 165 713 5.6E-85 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS21350 34e0d79cad82f72c29e4ef625b88a9e7 231 SUPERFAMILY SSF53271 53 228 2.88E-32 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL504_RS21350 34e0d79cad82f72c29e4ef625b88a9e7 231 Gene3D G3DSA:3.40.50.2020 68 231 2.0E-27 T 28-03-2018 AL504_RS21350 34e0d79cad82f72c29e4ef625b88a9e7 231 Pfam PF00156 Phosphoribosyl transferase domain 129 226 6.8E-8 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL504_RS27935 b878195b9a05ccd87b6ac07f4fb13389 222 Gene3D G3DSA:3.30.70.100 118 208 0.38 T 28-03-2018 AL504_RS27935 b878195b9a05ccd87b6ac07f4fb13389 222 Gene3D G3DSA:3.30.70.100 6 110 4.4E-6 T 28-03-2018 AL504_RS05230 618759ea60860f015662249126a7ddb7 332 Gene3D G3DSA:3.40.190.10 126 331 3.8E-25 T 28-03-2018 AL504_RS05230 618759ea60860f015662249126a7ddb7 332 SUPERFAMILY SSF53850 26 247 7.26E-37 T 28-03-2018 AL504_RS05230 618759ea60860f015662249126a7ddb7 332 Pfam PF09084 NMT1/THI5 like 39 246 7.5E-24 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS05230 618759ea60860f015662249126a7ddb7 332 Gene3D G3DSA:3.40.190.10 21 125 1.3E-16 T 28-03-2018 AL504_RS17475 2f6380a5c16806e763699f3e8c605a3f 469 SUPERFAMILY SSF103473 256 456 5.89E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17475 2f6380a5c16806e763699f3e8c605a3f 469 SUPERFAMILY SSF103473 20 207 5.89E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17475 2f6380a5c16806e763699f3e8c605a3f 469 Pfam PF07690 Major Facilitator Superfamily 28 417 1.3E-51 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS17475 2f6380a5c16806e763699f3e8c605a3f 469 Gene3D G3DSA:1.20.1250.20 19 208 1.8E-24 T 28-03-2018 AL504_RS17475 2f6380a5c16806e763699f3e8c605a3f 469 Gene3D G3DSA:1.20.1250.20 267 459 1.5E-22 T 28-03-2018 AL504_RS06765 0e30ffd1f1d98a940887b5bd116b7a9c 314 Gene3D G3DSA:1.10.3720.10 2 301 9.1E-43 T 28-03-2018 AL504_RS06765 0e30ffd1f1d98a940887b5bd116b7a9c 314 SUPERFAMILY SSF161098 91 297 1.14E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS06765 0e30ffd1f1d98a940887b5bd116b7a9c 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 2.1E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14415 8c9f48c87a6d478417d29473f10aa996 792 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 759 19.823 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AL504_RS14415 8c9f48c87a6d478417d29473f10aa996 792 Pfam PF04453 Organic solvent tolerance protein 296 686 3.1E-97 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AL504_RS14415 8c9f48c87a6d478417d29473f10aa996 792 Gene3D G3DSA:2.60.450.10 50 203 7.4E-14 T 28-03-2018 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 Gene3D G3DSA:2.40.110.10 131 226 1.6E-35 T 28-03-2018 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 SUPERFAMILY SSF47203 235 388 5.64E-48 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 Gene3D G3DSA:1.20.140.10 227 389 3.5E-51 T 28-03-2018 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 Gene3D G3DSA:1.10.540.10 2 130 6.2E-18 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 386 9.5E-44 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 134 146 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 225 4.4E-23 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 128 2.7E-11 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS16015 41db77b3b7a7fea292d84c8178c3dddf 389 SUPERFAMILY SSF56645 11 248 5.76E-64 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS19230 49d336ecab53a7568fb815bc2f13105d 295 SUPERFAMILY SSF161098 20 290 1.14E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19230 49d336ecab53a7568fb815bc2f13105d 295 Gene3D G3DSA:1.10.3720.10 21 294 2.1E-47 T 28-03-2018 AL504_RS19230 49d336ecab53a7568fb815bc2f13105d 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 287 4.5E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS30775 bada4595f3751c2c55fae01ef0324807 327 SUPERFAMILY SSF56349 56 317 1.24E-52 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS30775 bada4595f3751c2c55fae01ef0324807 327 Gene3D G3DSA:1.10.443.10 163 327 5.0E-31 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS30775 bada4595f3751c2c55fae01ef0324807 327 Gene3D G3DSA:1.10.150.130 53 162 8.6E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS30775 bada4595f3751c2c55fae01ef0324807 327 Pfam PF00589 Phage integrase family 191 317 1.4E-18 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 Gene3D G3DSA:1.20.200.10 122 389 1.9E-99 T 28-03-2018 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00145 Argininosuccinate lyase family signature 246 270 1.8E-66 T 28-03-2018 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00145 Argininosuccinate lyase family signature 290 306 1.8E-66 T 28-03-2018 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00145 Argininosuccinate lyase family signature 157 177 1.8E-66 T 28-03-2018 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00145 Argininosuccinate lyase family signature 325 344 1.8E-66 T 28-03-2018 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00145 Argininosuccinate lyase family signature 116 138 1.8E-66 T 28-03-2018 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00145 Argininosuccinate lyase family signature 208 224 1.8E-66 T 28-03-2018 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 SUPERFAMILY SSF48557 19 463 1.23E-148 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 TIGRFAM TIGR00838 argH: argininosuccinate lyase 19 462 1.8E-185 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 Pfam PF14698 Argininosuccinate lyase C-terminal 378 446 6.3E-27 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 Hamap MF_00006 Argininosuccinate lyase [argH]. 17 468 42.986 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 Gene3D G3DSA:1.10.275.10 17 121 1.5E-35 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 Pfam PF00206 Lyase 22 315 4.5E-73 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 8.0E-29 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00149 Fumarate lyase superfamily signature 162 180 8.0E-29 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00149 Fumarate lyase superfamily signature 290 306 8.0E-29 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 PRINTS PR00149 Fumarate lyase superfamily signature 246 273 8.0E-29 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 ProSitePatterns PS00163 Fumarate lyases signature. 290 299 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL504_RS06885 90ba217619f362dd9bea26363d00a906 472 Gene3D G3DSA:1.10.40.30 390 447 3.2E-29 T 28-03-2018 AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 SUPERFAMILY SSF51735 15 339 1.48E-84 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 Gene3D G3DSA:3.90.25.10 196 340 5.7E-34 T 28-03-2018 AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 PRINTS PR01713 Nucleotide sugar epimerase signature 45 61 4.3E-8 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 PRINTS PR01713 Nucleotide sugar epimerase signature 234 249 4.3E-8 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 PRINTS PR01713 Nucleotide sugar epimerase signature 258 273 4.3E-8 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 PRINTS PR01713 Nucleotide sugar epimerase signature 302 319 4.3E-8 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 Gene3D G3DSA:3.40.50.720 17 195 1.1E-32 T 28-03-2018 AL504_RS23105 1c0f03d6a01b469982e28143f0ad7aa2 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 264 2.0E-55 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS16840 ee95efa0008060a71356064f77e415ec 327 SMART SM00382 34 233 1.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16840 ee95efa0008060a71356064f77e415ec 327 Pfam PF00005 ABC transporter 26 183 2.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16840 ee95efa0008060a71356064f77e415ec 327 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS16840 ee95efa0008060a71356064f77e415ec 327 Gene3D G3DSA:3.40.50.300 2 326 9.3E-77 T 28-03-2018 AL504_RS16840 ee95efa0008060a71356064f77e415ec 327 SUPERFAMILY SSF52540 34 306 1.65E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16840 ee95efa0008060a71356064f77e415ec 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 317 3.5E-23 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS16840 ee95efa0008060a71356064f77e415ec 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 5.1E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 Pfam PF01494 FAD binding domain 10 325 2.2E-22 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.8E-13 T 28-03-2018 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 1.8E-13 T 28-03-2018 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.8E-13 T 28-03-2018 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.8E-13 T 28-03-2018 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 Gene3D G3DSA:3.50.50.60 9 347 1.1E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 SUPERFAMILY SSF51905 267 357 3.02E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS29520 cba5d36e88b6610586f20e16731c02aa 390 SUPERFAMILY SSF51905 9 168 3.02E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21775 fa2d314d39f07480cc0e72942449cce8 334 Gene3D G3DSA:1.10.3470.10 4 300 4.5E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS21775 fa2d314d39f07480cc0e72942449cce8 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 29 291 1.3E-43 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 Pfam PF02311 AraC-like ligand binding domain 28 120 2.2E-7 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 SUPERFAMILY SSF46689 210 255 1.61E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 Gene3D G3DSA:1.10.10.60 162 213 3.9E-12 T 28-03-2018 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 Gene3D G3DSA:1.10.10.60 215 259 3.2E-9 T 28-03-2018 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 SUPERFAMILY SSF51182 15 187 1.42E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 Gene3D G3DSA:2.60.120.10 2 161 6.4E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 2.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 2.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 SMART SM00342 173 255 5.3E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 Pfam PF12833 Helix-turn-helix domain 179 256 4.1E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS14530 bcecfc0d1d757084f1095675575d058e 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 Gene3D G3DSA:3.90.1150.10 20 178 5.5E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 419 5.8E-182 T 28-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 Gene3D G3DSA:3.90.1150.10 306 420 4.1E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 PIRSF PIRSF000521 122 420 2.6E-44 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 PIRSF PIRSF000521 3 128 0.0012 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 Gene3D G3DSA:3.40.640.10 179 305 7.3E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 SUPERFAMILY SSF53383 23 418 8.64E-130 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS28520 a0cb0a4f63b7555d21584b653b3049b5 420 Pfam PF00202 Aminotransferase class-III 24 418 6.8E-123 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 SMART SM01192 138 424 3.9E-189 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 Gene3D G3DSA:3.30.390.10 2 126 4.8E-45 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 SUPERFAMILY SSF54826 3 136 6.01E-49 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 ProSitePatterns PS00164 Enolase signature. 333 346 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 SMART SM01193 3 133 1.1E-80 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 3 422 1.0E-185 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 SUPERFAMILY SSF51604 138 422 4.19E-115 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 PRINTS PR00148 Enolase signature 36 50 9.8E-43 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 PRINTS PR00148 Enolase signature 333 347 9.8E-43 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 PRINTS PR00148 Enolase signature 362 379 9.8E-43 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 PRINTS PR00148 Enolase signature 106 122 9.8E-43 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 PRINTS PR00148 Enolase signature 160 173 9.8E-43 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 PRINTS PR00148 Enolase signature 310 321 9.8E-43 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 422 2.0E-110 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 Gene3D G3DSA:3.20.20.120 127 425 1.3E-93 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 PIRSF PIRSF001400 1 423 1.4E-170 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 Hamap MF_00318 Enolase [eno]. 1 410 41.223 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS01770 e09e6f07c09fa3e8af4dd9136adaf45f 426 Pfam PF03952 Enolase, N-terminal domain 3 133 3.2E-51 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS12145 04633c39f517ab39f541974302328b2b 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL504_RS12145 04633c39f517ab39f541974302328b2b 409 SUPERFAMILY SSF53901 2 251 6.02E-84 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS12145 04633c39f517ab39f541974302328b2b 409 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 406 4.7E-197 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL504_RS12145 04633c39f517ab39f541974302328b2b 409 Gene3D G3DSA:3.40.47.10 260 409 1.4E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS12145 04633c39f517ab39f541974302328b2b 409 SMART SM00825 Beta-ketoacyl synthase 5 409 3.2E-15 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL504_RS12145 04633c39f517ab39f541974302328b2b 409 Gene3D G3DSA:3.40.47.10 5 259 7.2E-86 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS12145 04633c39f517ab39f541974302328b2b 409 PIRSF PIRSF000447 1 409 3.6E-184 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL504_RS12145 04633c39f517ab39f541974302328b2b 409 SUPERFAMILY SSF53901 213 408 9.17E-68 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS12145 04633c39f517ab39f541974302328b2b 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 7.7E-65 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL504_RS12145 04633c39f517ab39f541974302328b2b 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 366 3.6E-32 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 429 3.8E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 7.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 7.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 Gene3D G3DSA:3.30.565.10 281 434 7.4E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 SUPERFAMILY SSF47384 196 275 1.73E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 Gene3D G3DSA:1.10.287.130 201 272 6.9E-10 T 28-03-2018 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 SMART SM00387 322 433 1.1E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 2.2E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 SMART SM00304 158 210 7.6E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 SMART SM00388 211 276 9.8E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS22595 44dd66df51cc309d6f029eb0d8d9d00b 437 SUPERFAMILY SSF55874 267 429 1.26E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15900 49b307dbd77c68ed24b51c485e609670 224 Pfam PF03737 Aldolase/RraA 30 176 1.1E-43 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS15900 49b307dbd77c68ed24b51c485e609670 224 SUPERFAMILY SSF89562 30 181 1.29E-42 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS15900 49b307dbd77c68ed24b51c485e609670 224 Gene3D G3DSA:3.50.30.40 23 197 1.1E-49 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 SUPERFAMILY SSF51735 4 251 1.24E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 192 4.6E-5 T 28-03-2018 AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 249 8.5E-50 T 28-03-2018 AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 Gene3D G3DSA:3.40.50.720 39 251 4.8E-56 T 28-03-2018 AL504_RS23615 53f1f91abcb9e506cb9511f183144014 251 Gene3D G3DSA:3.40.50.720 2 38 7.0E-6 T 28-03-2018 AL504_RS04290 76e5fb88d5bda24e85ca98b8f883387a 50 Pfam PF11752 Protein of unknown function (DUF3309) 2 50 1.4E-24 T 28-03-2018 IPR021738 Protein of unknown function DUF3309 AL504_RS15090 3e4bb22ba669d2950936e24510315cfd 295 Gene3D G3DSA:3.40.50.1820 52 294 3.7E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15090 3e4bb22ba669d2950936e24510315cfd 295 Pfam PF12146 Serine aminopeptidase, S33 81 193 1.3E-15 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS15090 3e4bb22ba669d2950936e24510315cfd 295 SUPERFAMILY SSF53474 24 285 2.79E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15090 3e4bb22ba669d2950936e24510315cfd 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 122 6.4E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS15090 3e4bb22ba669d2950936e24510315cfd 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 154 167 6.4E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS00310 8d0b1ff4622a5abc4b6732c3b552a835 324 SUPERFAMILY SSF52540 5 297 2.4E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00310 8d0b1ff4622a5abc4b6732c3b552a835 324 Gene3D G3DSA:3.40.50.300 18 187 6.9E-25 T 28-03-2018 AL504_RS00310 8d0b1ff4622a5abc4b6732c3b552a835 324 PIRSF PIRSF002849 1 324 8.5E-122 T 28-03-2018 AL504_RS00310 8d0b1ff4622a5abc4b6732c3b552a835 324 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 170 6.0E-61 T 28-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL504_RS00310 8d0b1ff4622a5abc4b6732c3b552a835 324 Gene3D G3DSA:1.10.8.300 204 320 4.0E-35 T 28-03-2018 AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 SUPERFAMILY SSF51735 3 238 8.83E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 Pfam PF00106 short chain dehydrogenase 5 199 3.9E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.6E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.6E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.6E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.6E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.6E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.6E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS31395 dda14a938645a7f8ffbfc05a43301392 251 Gene3D G3DSA:3.40.50.720 1 244 2.2E-42 T 28-03-2018 AL504_RS17610 dbe413d6090dc07ee21728c754619a53 356 Gene3D G3DSA:3.30.1780.10 1 138 4.5E-32 T 28-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL504_RS17610 dbe413d6090dc07ee21728c754619a53 356 Gene3D G3DSA:3.40.50.720 139 295 4.7E-26 T 28-03-2018 AL504_RS17610 dbe413d6090dc07ee21728c754619a53 356 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 20 313 1.9E-96 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS17610 dbe413d6090dc07ee21728c754619a53 356 SUPERFAMILY SSF51735 2 336 2.37E-95 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS17610 dbe413d6090dc07ee21728c754619a53 356 PIRSF PIRSF001439 33 323 1.7E-51 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS23485 767e8769fe4fa52a15daf386a05ed72e 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 293 2.8E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS23485 767e8769fe4fa52a15daf386a05ed72e 306 Gene3D G3DSA:1.10.3470.10 1 298 2.1E-43 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 Pfam PF02867 Ribonucleotide reductase, barrel domain 372 911 1.6E-181 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 295 366 6.8E-21 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 SUPERFAMILY SSF51998 371 815 3.05E-179 T 28-03-2018 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 SUPERFAMILY SSF51998 846 914 3.05E-179 T 28-03-2018 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 Pfam PF03477 ATP cone domain 34 130 1.2E-16 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 PRINTS PR01183 Ribonucleotide reductase large chain signature 766 793 3.5E-42 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 PRINTS PR01183 Ribonucleotide reductase large chain signature 447 466 3.5E-42 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 PRINTS PR01183 Ribonucleotide reductase large chain signature 662 684 3.5E-42 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 PRINTS PR01183 Ribonucleotide reductase large chain signature 582 593 3.5E-42 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 PRINTS PR01183 Ribonucleotide reductase large chain signature 624 647 3.5E-42 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 PRINTS PR01183 Ribonucleotide reductase large chain signature 690 713 3.5E-42 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 SUPERFAMILY SSF48168 160 370 2.35E-58 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 298 914 3.9E-209 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 755 777 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS15720 a53cbde762f8e0943ab44b2256d42e2d 976 Gene3D G3DSA:3.20.70.20 279 918 1.9E-211 T 28-03-2018 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 Gene3D G3DSA:1.20.140.10 222 353 7.4E-27 T 28-03-2018 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 Gene3D G3DSA:2.40.110.10 119 221 5.5E-13 T 28-03-2018 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 SUPERFAMILY SSF47203 227 366 6.44E-33 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 364 2.6E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 SUPERFAMILY SSF56645 1 216 3.66E-41 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 Gene3D G3DSA:1.10.540.10 1 118 2.3E-23 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 207 1.1E-8 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS14270 ac979a0d8c60dc4d2d0dbb18274e6c9d 370 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 1.5E-15 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS07565 69565828d15ac0f5b08053f5c4827a8a 406 SUPERFAMILY SSF48695 19 196 4.09E-53 T 28-03-2018 IPR011031 Multihaem cytochrome AL504_RS07565 69565828d15ac0f5b08053f5c4827a8a 406 Gene3D G3DSA:1.10.468.10 82 214 6.2E-28 T 28-03-2018 AL504_RS07565 69565828d15ac0f5b08053f5c4827a8a 406 Gene3D G3DSA:3.90.10.10 44 81 0.28 T 28-03-2018 AL504_RS07565 69565828d15ac0f5b08053f5c4827a8a 406 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 19 399 2.2E-154 T 28-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL504_RS07565 69565828d15ac0f5b08053f5c4827a8a 406 PIRSF PIRSF000014 9 401 1.5E-138 T 28-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL504_RS07565 69565828d15ac0f5b08053f5c4827a8a 406 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 23 194 7.6E-69 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL504_RS00490 1cd5c2f43c8382e0162ee3ba5bc98fea 182 SUPERFAMILY SSF88659 89 167 6.11E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00490 1cd5c2f43c8382e0162ee3ba5bc98fea 182 Pfam PF08281 Sigma-70, region 4 109 161 7.1E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00490 1cd5c2f43c8382e0162ee3ba5bc98fea 182 Pfam PF04542 Sigma-70 region 2 16 77 2.3E-4 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00490 1cd5c2f43c8382e0162ee3ba5bc98fea 182 SUPERFAMILY SSF88946 11 74 2.12E-5 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00490 1cd5c2f43c8382e0162ee3ba5bc98fea 182 Gene3D G3DSA:1.10.1740.10 7 72 1.9E-6 T 28-03-2018 AL504_RS00490 1cd5c2f43c8382e0162ee3ba5bc98fea 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 164 2.3E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00490 1cd5c2f43c8382e0162ee3ba5bc98fea 182 Gene3D G3DSA:1.10.10.10 73 168 1.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02595 88fa55a9fb38283ad37c1495e089c43d 254 Pfam PF04055 Radical SAM superfamily 58 202 1.7E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS02595 88fa55a9fb38283ad37c1495e089c43d 254 Gene3D G3DSA:3.20.20.70 53 252 1.7E-23 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS02595 88fa55a9fb38283ad37c1495e089c43d 254 SUPERFAMILY SSF102114 50 245 3.66E-25 T 28-03-2018 AL504_RS02595 88fa55a9fb38283ad37c1495e089c43d 254 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 39 224 3.1E-54 T 28-03-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein AL504_RS02595 88fa55a9fb38283ad37c1495e089c43d 254 Pfam PF13353 4Fe-4S single cluster domain 51 126 4.5E-8 T 28-03-2018 AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 Gene3D G3DSA:3.40.50.1220 188 333 4.7E-26 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 Gene3D G3DSA:3.40.50.970 1 187 9.8E-41 T 28-03-2018 AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 324 2.2E-21 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 SUPERFAMILY SSF52467 152 331 2.16E-28 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 SUPERFAMILY SSF52518 2 168 7.25E-40 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 SUPERFAMILY SSF52518 357 529 9.43E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 166 4.5E-42 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 Gene3D G3DSA:3.40.50.970 334 531 1.4E-31 T 28-03-2018 AL504_RS24015 1e572e911d608eef0b706de5b7403c3b 535 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 523 1.4E-29 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS27770 eecb3d703068edfb69268d2d983f2c4f 397 Gene3D G3DSA:2.60.120.650 8 212 4.4E-29 T 28-03-2018 AL504_RS27770 eecb3d703068edfb69268d2d983f2c4f 397 Pfam PF08007 Cupin superfamily protein 15 325 7.4E-87 T 28-03-2018 IPR003347 JmjC domain AL504_RS27770 eecb3d703068edfb69268d2d983f2c4f 397 SMART SM00558 98 225 0.0023 T 28-03-2018 IPR003347 JmjC domain AL504_RS27770 eecb3d703068edfb69268d2d983f2c4f 397 SUPERFAMILY SSF51197 6 300 1.37E-62 T 28-03-2018 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 PRINTS PR00050 Cold shock protein signature 39 48 3.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 PRINTS PR00050 Cold shock protein signature 54 72 3.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 PRINTS PR00050 Cold shock protein signature 18 33 3.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 Gene3D G3DSA:2.40.50.140 8 81 1.3E-29 T 28-03-2018 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 SMART SM00357 17 81 2.3E-32 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 Pfam PF00313 'Cold-shock' DNA-binding domain 17 80 3.1E-31 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 PIRSF PIRSF002599 12 81 3.4E-24 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 ProSitePatterns PS00352 'Cold-shock' domain signature. 29 48 - T 28-03-2018 IPR019844 Cold-shock conserved site AL504_RS30440 df0e3e94b55d12014c0c9be2fb3a54d5 81 SUPERFAMILY SSF50249 15 79 2.36E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS16345 a79136bc07b4b073f1330dc61a7728b7 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.3E-8 T 28-03-2018 AL504_RS16345 a79136bc07b4b073f1330dc61a7728b7 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 129 144 1.3E-8 T 28-03-2018 AL504_RS16345 a79136bc07b4b073f1330dc61a7728b7 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 290 1.3E-8 T 28-03-2018 AL504_RS16345 a79136bc07b4b073f1330dc61a7728b7 379 SUPERFAMILY SSF51905 1 153 8.88E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16345 a79136bc07b4b073f1330dc61a7728b7 379 SUPERFAMILY SSF51905 254 337 8.88E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16345 a79136bc07b4b073f1330dc61a7728b7 379 Pfam PF01494 FAD binding domain 131 295 4.1E-9 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS16345 a79136bc07b4b073f1330dc61a7728b7 379 Gene3D G3DSA:3.50.50.60 1 378 7.0E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19505 82b89b5a8de86deb9cd48360b2e78530 305 Pfam PF02195 ParB-like nuclease domain 41 131 7.1E-25 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS19505 82b89b5a8de86deb9cd48360b2e78530 305 Gene3D G3DSA:1.10.10.730 132 179 1.1E-20 T 28-03-2018 AL504_RS19505 82b89b5a8de86deb9cd48360b2e78530 305 SUPERFAMILY SSF109709 124 230 2.22E-33 T 28-03-2018 AL504_RS19505 82b89b5a8de86deb9cd48360b2e78530 305 SUPERFAMILY SSF110849 40 133 2.88E-28 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS19505 82b89b5a8de86deb9cd48360b2e78530 305 SMART SM00470 39 131 2.8E-34 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS19505 82b89b5a8de86deb9cd48360b2e78530 305 Gene3D G3DSA:3.90.1530.10 28 131 2.1E-34 T 28-03-2018 AL504_RS19505 82b89b5a8de86deb9cd48360b2e78530 305 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 216 8.4E-58 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 Pfam PF00593 TonB dependent receptor 349 823 2.0E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 809 826 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 Pfam PF07715 TonB-dependent Receptor Plug Domain 168 270 1.6E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 Gene3D G3DSA:2.40.170.20 278 826 1.0E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 SMART SM00965 75 126 2.2E-5 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 170 826 1.8E-105 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 Gene3D G3DSA:2.170.130.10 126 277 2.7E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00230 b04b272a05ced7fe2eed496d39a9c519 826 SUPERFAMILY SSF56935 130 826 2.29E-126 T 28-03-2018 AL504_RS00760 4c30df2274715289bc0babf110611f7c 249 Gene3D G3DSA:3.40.50.720 70 245 2.3E-11 T 28-03-2018 AL504_RS00760 4c30df2274715289bc0babf110611f7c 249 Pfam PF05368 NmrA-like family 3 143 2.0E-7 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AL504_RS00760 4c30df2274715289bc0babf110611f7c 249 SUPERFAMILY SSF51735 1 205 2.51E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS00760 4c30df2274715289bc0babf110611f7c 249 Gene3D G3DSA:3.40.50.20 1 69 5.4E-7 T 28-03-2018 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 Gene3D G3DSA:1.10.240.10 198 328 3.5E-25 T 28-03-2018 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 SUPERFAMILY SSF52374 4 332 1.52E-81 T 28-03-2018 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 SUPERFAMILY SSF160113 354 405 1.27E-9 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 36.79 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 Gene3D G3DSA:3.40.50.620 1 197 4.5E-62 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 332 1.8E-95 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL504_RS11635 6ad64aa8630b8d2669703dbcf352441a 450 Pfam PF00579 tRNA synthetases class I (W and Y) 3 287 2.2E-55 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 SUPERFAMILY SSF52540 63 349 2.34E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 142 150 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 Pfam PF00270 DEAD/DEAH box helicase 13 183 3.0E-49 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 SMART SM00490 247 328 2.1E-29 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 Gene3D G3DSA:3.40.50.300 3 212 1.6E-58 T 28-03-2018 AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 Gene3D G3DSA:3.40.50.300 213 403 4.6E-45 T 28-03-2018 AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 Pfam PF00271 Helicase conserved C-terminal domain 224 328 3.5E-25 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS18480 e52477c994a75585f020d52c557a20a4 488 SMART SM00487 8 211 2.9E-62 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS15660 6770ffb587257d8770b774490464843a 270 Gene3D G3DSA:3.40.50.300 13 235 3.7E-63 T 28-03-2018 AL504_RS15660 6770ffb587257d8770b774490464843a 270 SMART SM00382 45 226 1.7E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15660 6770ffb587257d8770b774490464843a 270 SUPERFAMILY SSF52540 17 245 3.39E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15660 6770ffb587257d8770b774490464843a 270 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS15660 6770ffb587257d8770b774490464843a 270 Pfam PF00005 ABC transporter 36 175 9.2E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 Gene3D G3DSA:1.10.10.10 2 163 2.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 SMART SM00347 43 146 3.0E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 SUPERFAMILY SSF46785 11 157 4.93E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 Pfam PF01047 MarR family 52 111 1.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26860 557c53050cfd37dfaf4da978e771959e 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 2.1E-12 T 28-03-2018 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.1E-12 T 28-03-2018 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.1E-12 T 28-03-2018 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 1.0E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 1.0E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 1.0E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 1.0E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 Gene3D G3DSA:3.50.50.60 9 167 2.0E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 291 2.1E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 Gene3D G3DSA:3.50.50.60 168 304 6.1E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 SUPERFAMILY SSF51905 234 301 5.27E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05380 cafd24548bcc9fe081041971b8250a0c 319 SUPERFAMILY SSF51905 8 126 5.27E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS20640 0b9502f6a302a5549a6adf4fced551ab 327 Gene3D G3DSA:3.40.190.10 125 236 3.5E-7 T 28-03-2018 AL504_RS20640 0b9502f6a302a5549a6adf4fced551ab 327 PIRSF PIRSF017082 1 327 3.1E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS20640 0b9502f6a302a5549a6adf4fced551ab 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 323 6.3E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS20640 0b9502f6a302a5549a6adf4fced551ab 327 SUPERFAMILY SSF53850 114 291 2.39E-7 T 28-03-2018 AL504_RS07095 fe143daf2f5032552a1f2af91486d0e0 267 SUPERFAMILY SSF53335 49 171 3.31E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS07095 fe143daf2f5032552a1f2af91486d0e0 267 SUPERFAMILY SSF53335 208 264 3.31E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS07095 fe143daf2f5032552a1f2af91486d0e0 267 Pfam PF08241 Methyltransferase domain 68 162 1.1E-15 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL504_RS07095 fe143daf2f5032552a1f2af91486d0e0 267 Gene3D G3DSA:3.40.50.150 7 213 1.7E-19 T 28-03-2018 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 SUPERFAMILY SSF111369 52 127 3.4E-8 T 28-03-2018 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 Gene3D G3DSA:2.40.50.100 216 393 3.5E-8 T 28-03-2018 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 207 295 5.1E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 Pfam PF00529 HlyD membrane-fusion protein of T1SS 244 352 4.8E-8 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 Gene3D G3DSA:2.40.50.100 52 138 5.3E-12 T 28-03-2018 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 SUPERFAMILY SSF111369 122 182 1.02E-5 T 28-03-2018 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 Gene3D G3DSA:1.10.287.470 139 181 2.0E-12 T 28-03-2018 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 SUPERFAMILY SSF111369 174 274 1.1E-8 T 28-03-2018 AL504_RS09410 bc5bec5f15df50f9b10597c3e41e115e 419 Pfam PF13533 Biotin-lipoyl like 54 101 5.9E-12 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 Gene3D G3DSA:3.50.50.60 4 183 2.6E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 SUPERFAMILY SSF51905 288 400 9.27E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 SUPERFAMILY SSF51905 28 197 9.27E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 Gene3D G3DSA:3.30.9.10 184 309 1.4E-26 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 Gene3D G3DSA:3.30.9.10 310 403 2.3E-17 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 Pfam PF01494 FAD binding domain 28 364 1.1E-65 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 Gene3D G3DSA:3.40.30.20 484 554 0.001 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 Gene3D G3DSA:3.40.30.20 409 483 0.0091 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 176 191 1.4E-35 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 28 50 1.4E-35 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 332 1.4E-35 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 316 1.4E-35 T 28-03-2018 AL504_RS23240 5fde452237d993e85b64f4bd2fb7ce9b 559 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 352 1.4E-35 T 28-03-2018 AL504_RS03720 8bcd4980c5f73b5229acaccff44d934b 87 Pfam PF04023 FeoA domain 7 82 5.1E-16 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL504_RS03720 8bcd4980c5f73b5229acaccff44d934b 87 Gene3D G3DSA:2.30.30.90 5 86 2.2E-17 T 28-03-2018 AL504_RS03720 8bcd4980c5f73b5229acaccff44d934b 87 SUPERFAMILY SSF50037 8 81 2.98E-12 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal AL504_RS03720 8bcd4980c5f73b5229acaccff44d934b 87 SMART SM00899 6 82 1.2E-15 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Pfam PF14520 Helix-hairpin-helix domain 479 534 1.2E-6 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 PIRSF PIRSF001604 2 701 1.5E-240 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Gene3D G3DSA:1.10.287.610 5 72 1.1E-26 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Gene3D G3DSA:3.40.50.10190 605 700 2.2E-27 T 28-03-2018 IPR001357 BRCT domain AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 441 467 2.2E-10 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Gene3D G3DSA:1.10.150.20 465 538 2.1E-23 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SUPERFAMILY SSF56091 9 349 1.44E-113 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SUPERFAMILY SSF47781 436 616 1.89E-61 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Gene3D G3DSA:3.30.470.30 130 284 1.2E-51 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 354 431 8.8E-37 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SMART SM00532 8 481 6.8E-261 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Gene3D G3DSA:2.40.50.140 350 423 9.1E-36 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 242 4.3E-95 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 264 351 5.7E-21 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Gene3D G3DSA:1.10.150.20 539 604 5.3E-31 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 364 379 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 126 155 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 16 694 1.2E-247 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 626 698 5.6E-14 T 28-03-2018 IPR001357 BRCT domain AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Pfam PF12826 Helix-hairpin-helix motif 543 606 7.1E-25 T 28-03-2018 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SMART SM00278 545 564 300.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SMART SM00278 577 596 83.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SMART SM00278 479 498 6.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SMART SM00278 513 532 21.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SUPERFAMILY SSF50249 350 433 1.18E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 Hamap MF_01588 DNA ligase [ligA]. 7 698 54.376 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SUPERFAMILY SSF52113 624 698 3.74E-18 T 28-03-2018 IPR001357 BRCT domain AL504_RS12410 2c3660b9922e4e9dbe60295929fdc06b 701 SMART SM00292 624 701 6.8E-11 T 28-03-2018 IPR001357 BRCT domain AL504_RS23940 5bbc514a13aa4a69b871d0c08e5e1e8f 483 Gene3D G3DSA:3.90.1300.10 1 481 2.9E-136 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS23940 5bbc514a13aa4a69b871d0c08e5e1e8f 483 SUPERFAMILY SSF75304 4 463 5.63E-130 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS23940 5bbc514a13aa4a69b871d0c08e5e1e8f 483 Pfam PF01425 Amidase 26 451 3.0E-96 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 PIRSF PIRSF000137 1 532 3.2E-140 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 SUPERFAMILY SSF54373 288 471 2.65E-53 T 28-03-2018 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 Pfam PF00732 GMC oxidoreductase 4 293 7.9E-79 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 Gene3D G3DSA:3.30.560.10 104 482 8.1E-97 T 28-03-2018 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 Pfam PF05199 GMC oxidoreductase 385 520 9.4E-42 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 252 266 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 Gene3D G3DSA:4.10.450.10 35 103 9.5E-27 T 28-03-2018 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 SUPERFAMILY SSF51905 3 286 1.65E-78 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS28820 5dbb659c0a9521dcc49df2b072564a79 532 SUPERFAMILY SSF51905 470 529 1.65E-78 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS02750 98c1882cb466139cea1c4d94479439e6 341 Gene3D G3DSA:3.40.190.10 26 137 5.0E-18 T 28-03-2018 AL504_RS02750 98c1882cb466139cea1c4d94479439e6 341 Gene3D G3DSA:3.40.190.10 138 229 6.5E-15 T 28-03-2018 AL504_RS02750 98c1882cb466139cea1c4d94479439e6 341 SUPERFAMILY SSF53850 27 257 1.63E-45 T 28-03-2018 AL504_RS02750 98c1882cb466139cea1c4d94479439e6 341 SMART SM00062 36 266 9.7E-42 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS02750 98c1882cb466139cea1c4d94479439e6 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 255 1.9E-27 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 SUPERFAMILY SSF48498 84 186 1.82E-20 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.6E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.6E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 SUPERFAMILY SSF46689 5 74 1.28E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 Gene3D G3DSA:1.10.357.10 82 193 1.0E-7 T 28-03-2018 AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 Gene3D G3DSA:1.10.10.60 49 81 8.7E-10 T 28-03-2018 AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 Gene3D G3DSA:1.10.10.60 2 48 7.3E-17 T 28-03-2018 AL504_RS06735 701ca3c34e7954d84e7253f7b138b90f 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.2E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS11540 3d2c59903a64c100a59c1041c6caa36f 290 Pfam PF02567 Phenazine biosynthesis-like protein 10 281 1.4E-48 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS11540 3d2c59903a64c100a59c1041c6caa36f 290 Gene3D G3DSA:3.10.310.10 1 123 2.2E-25 T 28-03-2018 AL504_RS11540 3d2c59903a64c100a59c1041c6caa36f 290 SUPERFAMILY SSF54506 3 288 9.25E-66 T 28-03-2018 AL504_RS11540 3d2c59903a64c100a59c1041c6caa36f 290 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 283 1.5E-54 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS11540 3d2c59903a64c100a59c1041c6caa36f 290 Gene3D G3DSA:3.10.310.10 124 279 2.2E-32 T 28-03-2018 AL504_RS11540 3d2c59903a64c100a59c1041c6caa36f 290 PIRSF PIRSF016184 1 290 1.8E-64 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS26650 7f91c891c1b5c8b3d35faa8afbf0dcd1 282 SUPERFAMILY SSF161098 11 273 2.62E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26650 7f91c891c1b5c8b3d35faa8afbf0dcd1 282 Gene3D G3DSA:1.10.3720.10 10 276 1.6E-36 T 28-03-2018 AL504_RS26650 7f91c891c1b5c8b3d35faa8afbf0dcd1 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 270 2.2E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14665 c6195c234cff09202066bf75d37a605a 184 Gene3D G3DSA:2.40.160.20 29 184 1.2E-51 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS14665 c6195c234cff09202066bf75d37a605a 184 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 1 184 37.526 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AL504_RS14665 c6195c234cff09202066bf75d37a605a 184 SUPERFAMILY SSF56925 26 184 1.18E-68 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS14665 c6195c234cff09202066bf75d37a605a 184 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 38 181 6.2E-62 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AL504_RS14665 c6195c234cff09202066bf75d37a605a 184 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 36 171 1.0E-61 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AL504_RS18575 20d4e5d3663ff907481adf65b847c22d 291 Gene3D G3DSA:1.10.3720.10 58 289 7.6E-47 T 28-03-2018 AL504_RS18575 20d4e5d3663ff907481adf65b847c22d 291 Gene3D G3DSA:1.20.58.370 2 39 8.5E-6 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AL504_RS18575 20d4e5d3663ff907481adf65b847c22d 291 SUPERFAMILY SSF161098 52 278 7.85E-60 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18575 20d4e5d3663ff907481adf65b847c22d 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 288 1.4E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07055 4769230f8682282702bd3eeaf814d7be 212 Pfam PF06912 Protein of unknown function (DUF1275) 1 201 6.8E-28 T 28-03-2018 IPR010699 Protein of unknown function DUF1275 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 Gene3D G3DSA:3.40.50.300 283 566 1.2E-75 T 28-03-2018 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 Gene3D G3DSA:3.40.50.300 2 282 1.2E-64 T 28-03-2018 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 ProSitePatterns PS00211 ABC transporters family signature. 435 449 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 SUPERFAMILY SSF52540 5 261 1.07E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 514 550 2.4E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 275 2.2E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 SMART SM00382 34 239 1.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 SMART SM00382 320 535 2.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 SUPERFAMILY SSF52540 285 534 1.03E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 Pfam PF00005 ABC transporter 312 462 1.5E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29585 67ffec4716b3b408290f8508913d08f1 586 Pfam PF00005 ABC transporter 26 189 6.1E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.0E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 Gene3D G3DSA:3.40.190.10 91 182 9.1E-21 T 28-03-2018 AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 Gene3D G3DSA:3.40.190.10 183 267 1.2E-18 T 28-03-2018 AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 Gene3D G3DSA:1.10.10.10 1 83 1.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 Pfam PF03466 LysR substrate binding domain 89 294 1.4E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 SUPERFAMILY SSF46785 2 112 1.09E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17910 b5df1a46eb7e65de28b25280d8eb8628 305 SUPERFAMILY SSF53850 90 296 2.54E-39 T 28-03-2018 AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 SMART SM00100 20 142 2.0E-10 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 SUPERFAMILY SSF46785 156 231 1.01E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 Gene3D G3DSA:2.60.120.10 11 155 2.9E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 SMART SM00419 173 221 9.5E-9 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 Pfam PF13545 Crp-like helix-turn-helix domain 159 227 7.3E-14 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 179 195 7.1E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 195 210 7.1E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 Gene3D G3DSA:1.10.10.10 156 232 2.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 Pfam PF00027 Cyclic nucleotide-binding domain 39 125 2.5E-13 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS28910 6fddeca0d834cd472b4c9987e9333bc4 232 SUPERFAMILY SSF51206 15 152 1.96E-25 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS17010 effe041891667d650348bf6653c58756 501 SUPERFAMILY SSF53300 312 479 5.65E-17 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS17010 effe041891667d650348bf6653c58756 501 Gene3D G3DSA:3.40.50.410 304 482 2.3E-15 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS17010 effe041891667d650348bf6653c58756 501 SMART SM00327 308 499 3.6E-8 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS15510 023799e629e015f9e9e261e7c9da9b80 516 Pfam PF04293 SpoVR like protein 25 455 1.1E-172 T 28-03-2018 IPR007390 Sporulation stage V, protein R AL504_RS01870 9e3b23d22deb373f42ad1841220a1cdf 768 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 318 433 6.8E-8 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 SUPERFAMILY SSF50156 252 377 5.26E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 Gene3D G3DSA:2.30.42.10 295 397 1.6E-25 T 28-03-2018 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 Pfam PF13180 PDZ domain 428 493 8.1E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 Pfam PF13180 PDZ domain 297 385 1.3E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 Gene3D G3DSA:2.30.42.10 406 497 5.0E-14 T 28-03-2018 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 SUPERFAMILY SSF50156 409 493 8.28E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 Pfam PF13365 Trypsin-like peptidase domain 124 255 5.0E-34 T 28-03-2018 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 Gene3D G3DSA:2.40.10.10 195 294 6.8E-37 T 28-03-2018 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 PRINTS PR00834 HtrA/DegQ protease family signature 334 346 1.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 PRINTS PR00834 HtrA/DegQ protease family signature 154 174 1.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 1.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 1.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 PRINTS PR00834 HtrA/DegQ protease family signature 133 145 1.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 PRINTS PR00834 HtrA/DegQ protease family signature 194 218 1.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 Gene3D G3DSA:2.40.10.10 46 194 1.2E-38 T 28-03-2018 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 SMART SM00228 294 376 1.4E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 SMART SM00228 408 486 6.7E-4 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 50 491 1.6E-144 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AL504_RS12120 c75a531c1e52ef0fbab88e589e68a214 497 SUPERFAMILY SSF50494 48 285 8.7E-67 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL504_RS14945 507d431f538432b5e479a8d236839d86 309 Gene3D G3DSA:3.40.50.720 107 275 4.1E-46 T 28-03-2018 AL504_RS14945 507d431f538432b5e479a8d236839d86 309 SUPERFAMILY SSF51735 95 275 3.48E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS14945 507d431f538432b5e479a8d236839d86 309 Gene3D G3DSA:3.40.50.720 3 106 2.2E-4 T 28-03-2018 AL504_RS14945 507d431f538432b5e479a8d236839d86 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 274 1.1E-46 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS17975 24d3c22b608bca3caea8b57a8c17f8e7 81 Gene3D G3DSA:3.30.300.90 2 81 6.2E-29 T 28-03-2018 AL504_RS17975 24d3c22b608bca3caea8b57a8c17f8e7 81 Pfam PF01722 BolA-like protein 23 75 1.4E-20 T 28-03-2018 IPR002634 BolA protein AL504_RS17975 24d3c22b608bca3caea8b57a8c17f8e7 81 SUPERFAMILY SSF82657 2 80 4.84E-29 T 28-03-2018 IPR002634 BolA protein AL504_RS17975 24d3c22b608bca3caea8b57a8c17f8e7 81 PIRSF PIRSF003113 1 81 6.1E-24 T 28-03-2018 IPR002634 BolA protein AL504_RS24380 038b9181884aa43734ccff88ff2227d3 149 SUPERFAMILY SSF55729 1 142 4.01E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS24380 038b9181884aa43734ccff88ff2227d3 149 Gene3D G3DSA:3.40.630.30 1 146 6.2E-28 T 28-03-2018 AL504_RS24380 038b9181884aa43734ccff88ff2227d3 149 Pfam PF13673 Acetyltransferase (GNAT) domain 56 135 6.6E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS08500 19fe1fc6b01dd0d70de47387ab9a3c38 298 SUPERFAMILY SSF103481 57 155 2.48E-13 T 28-03-2018 AL504_RS08500 19fe1fc6b01dd0d70de47387ab9a3c38 298 SUPERFAMILY SSF103481 203 295 9.68E-12 T 28-03-2018 AL504_RS08500 19fe1fc6b01dd0d70de47387ab9a3c38 298 Pfam PF00892 EamA-like transporter family 161 291 1.3E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS08500 19fe1fc6b01dd0d70de47387ab9a3c38 298 Pfam PF00892 EamA-like transporter family 20 152 1.4E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS20460 8a0e478f7f17a323484a93573a333710 268 SUPERFAMILY SSF53067 123 230 9.84E-23 T 28-03-2018 AL504_RS20460 8a0e478f7f17a323484a93573a333710 268 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 264 15.393 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL504_RS20460 8a0e478f7f17a323484a93573a333710 268 SUPERFAMILY SSF53067 1 116 6.47E-20 T 28-03-2018 AL504_RS20460 8a0e478f7f17a323484a93573a333710 268 Gene3D G3DSA:3.30.420.40 85 268 4.0E-45 T 28-03-2018 AL504_RS20460 8a0e478f7f17a323484a93573a333710 268 Pfam PF03309 Type III pantothenate kinase 2 201 2.1E-48 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL504_RS23810 89291e3af3a00d2ff66766ff443c2196 262 SUPERFAMILY SSF51182 23 84 2.45E-5 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS23810 89291e3af3a00d2ff66766ff443c2196 262 Pfam PF12833 Helix-turn-helix domain 186 251 4.7E-12 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS23810 89291e3af3a00d2ff66766ff443c2196 262 Gene3D G3DSA:1.10.10.60 145 216 9.4E-6 T 28-03-2018 AL504_RS23810 89291e3af3a00d2ff66766ff443c2196 262 Gene3D G3DSA:2.60.120.10 14 89 8.5E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23810 89291e3af3a00d2ff66766ff443c2196 262 SMART SM00342 178 250 6.1E-4 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS23810 89291e3af3a00d2ff66766ff443c2196 262 Gene3D G3DSA:1.10.10.60 217 252 0.035 T 28-03-2018 AL504_RS12550 9fde6dc9f44d50d18e8a525675cc76d1 164 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 12 158 5.1E-46 T 28-03-2018 AL504_RS12550 9fde6dc9f44d50d18e8a525675cc76d1 164 Gene3D G3DSA:3.40.30.10 75 164 2.1E-12 T 28-03-2018 AL504_RS12550 9fde6dc9f44d50d18e8a525675cc76d1 164 SUPERFAMILY SSF52833 3 159 1.45E-48 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS12550 9fde6dc9f44d50d18e8a525675cc76d1 164 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 10 157 1.6E-57 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12550 9fde6dc9f44d50d18e8a525675cc76d1 164 PIRSF PIRSF000216 2 164 5.5E-54 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS13105 d6ba28dc09e0cf1edb90fd65ed379b85 405 SUPERFAMILY SSF53686 5 354 4.98E-92 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS13105 d6ba28dc09e0cf1edb90fd65ed379b85 405 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 399 5.8E-133 T 28-03-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL504_RS13105 d6ba28dc09e0cf1edb90fd65ed379b85 405 Gene3D G3DSA:3.40.50.1100 14 157 5.4E-41 T 28-03-2018 AL504_RS13105 d6ba28dc09e0cf1edb90fd65ed379b85 405 Gene3D G3DSA:3.40.50.1100 158 326 1.6E-32 T 28-03-2018 AL504_RS13105 d6ba28dc09e0cf1edb90fd65ed379b85 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 305 9.3E-76 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS13105 d6ba28dc09e0cf1edb90fd65ed379b85 405 Gene3D G3DSA:3.30.70.260 327 401 4.0E-8 T 28-03-2018 AL504_RS03650 79d35f334b8b837cfa226be4c748fd21 140 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 136 1.5E-25 T 28-03-2018 IPR019587 Polyketide cyclase/dehydrase AL504_RS03650 79d35f334b8b837cfa226be4c748fd21 140 Gene3D G3DSA:3.30.530.20 2 140 8.8E-28 T 28-03-2018 IPR023393 START-like domain AL504_RS03650 79d35f334b8b837cfa226be4c748fd21 140 SUPERFAMILY SSF55961 1 135 2.75E-34 T 28-03-2018 AL504_RS11670 41cd54f02ace7c99fddcbc67e79aa79b 177 Gene3D G3DSA:1.10.1740.10 11 86 6.5E-15 T 28-03-2018 AL504_RS11670 41cd54f02ace7c99fddcbc67e79aa79b 177 SUPERFAMILY SSF88659 96 175 2.62E-17 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS11670 41cd54f02ace7c99fddcbc67e79aa79b 177 Pfam PF04542 Sigma-70 region 2 23 86 7.4E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS11670 41cd54f02ace7c99fddcbc67e79aa79b 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 171 4.9E-23 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS11670 41cd54f02ace7c99fddcbc67e79aa79b 177 SUPERFAMILY SSF88946 20 85 3.69E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS11670 41cd54f02ace7c99fddcbc67e79aa79b 177 Pfam PF08281 Sigma-70, region 4 119 171 2.5E-18 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS11670 41cd54f02ace7c99fddcbc67e79aa79b 177 Gene3D G3DSA:1.10.10.10 97 176 1.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14255 d5f75669126b1c3461d4dc553cc61c1a 276 Gene3D G3DSA:3.10.129.10 10 157 5.7E-15 T 28-03-2018 AL504_RS14255 d5f75669126b1c3461d4dc553cc61c1a 276 SUPERFAMILY SSF54637 162 274 4.66E-15 T 28-03-2018 IPR029069 HotDog domain AL504_RS14255 d5f75669126b1c3461d4dc553cc61c1a 276 Gene3D G3DSA:3.10.129.10 158 276 4.8E-19 T 28-03-2018 AL504_RS14255 d5f75669126b1c3461d4dc553cc61c1a 276 SUPERFAMILY SSF54637 55 145 1.79E-7 T 28-03-2018 IPR029069 HotDog domain AL504_RS14255 d5f75669126b1c3461d4dc553cc61c1a 276 Pfam PF13452 N-terminal half of MaoC dehydratase 75 135 3.6E-7 T 28-03-2018 AL504_RS03915 f3d7489995086499d0562dbd4d2035fa 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 311 1.5E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03915 f3d7489995086499d0562dbd4d2035fa 311 Gene3D G3DSA:1.10.3720.10 2 299 1.5E-38 T 28-03-2018 AL504_RS03915 f3d7489995086499d0562dbd4d2035fa 311 SUPERFAMILY SSF161098 90 295 5.89E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 Gene3D G3DSA:1.20.120.530 72 221 5.5E-30 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 SMART SM00345 17 75 4.2E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 Gene3D G3DSA:1.10.10.10 3 71 1.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 73 3.3E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 SUPERFAMILY SSF46785 14 79 4.82E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 SMART SM00895 85 208 4.2E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 Pfam PF07729 FCD domain 86 207 8.2E-27 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS14700 ef77b07289f8d0e820264c79a0529da1 247 SUPERFAMILY SSF48008 81 216 3.66E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS16420 aa8105599941dd0ca71d25accff51abf 310 SUPERFAMILY SSF53807 39 302 3.3E-57 T 28-03-2018 AL504_RS16420 aa8105599941dd0ca71d25accff51abf 310 Gene3D G3DSA:3.40.50.1980 151 310 5.7E-33 T 28-03-2018 AL504_RS16420 aa8105599941dd0ca71d25accff51abf 310 Pfam PF01497 Periplasmic binding protein 61 284 1.8E-18 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS16420 aa8105599941dd0ca71d25accff51abf 310 Gene3D G3DSA:3.40.50.1980 41 150 7.1E-25 T 28-03-2018 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 316 401 8.6E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 PIRSF PIRSF000018 15 427 1.5E-137 T 28-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 Gene3D G3DSA:1.10.760.10 169 306 1.2E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 Gene3D G3DSA:1.10.760.10 27 160 3.1E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 SUPERFAMILY SSF46626 42 168 7.6E-26 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 Pfam PF00034 Cytochrome c 47 146 5.6E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 SUPERFAMILY SSF46626 319 423 3.6E-24 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 SUPERFAMILY SSF46626 192 304 3.03E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21095 508453f93a3fd7bff8196208b65e4a74 427 Gene3D G3DSA:1.10.760.10 307 427 9.9E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 Gene3D G3DSA:1.25.40.10 346 376 0.0089 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 Gene3D G3DSA:1.25.40.10 243 345 1.2E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 Gene3D G3DSA:3.40.50.10070 121 242 1.6E-28 T 28-03-2018 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 Pfam PF00486 Transcriptional regulatory protein, C terminal 21 96 1.7E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 Gene3D G3DSA:1.25.40.10 413 495 1.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 Gene3D G3DSA:1.25.40.10 377 412 4.5E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 Gene3D G3DSA:1.10.10.10 1 103 4.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 SUPERFAMILY SSF46894 3 97 1.53E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 SUPERFAMILY SSF48452 269 488 1.09E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00755 e5b8c6e39be9a76795b97b9bb08a8d72 520 SMART SM00862 21 96 1.9E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS10565 6027f161d4738cc56fa4c45ee237945c 73 Gene3D G3DSA:2.30.30.100 22 71 4.1E-19 T 28-03-2018 AL504_RS10565 6027f161d4738cc56fa4c45ee237945c 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 71 4.1E-17 T 28-03-2018 IPR010305 Protein of unknown function DUF903 AL504_RS10565 6027f161d4738cc56fa4c45ee237945c 73 SUPERFAMILY SSF50182 22 72 4.2E-13 T 28-03-2018 IPR010920 LSM domain AL504_RS24710 35d0903df80d67b1c0cfabc0bc1ccfd3 255 Gene3D G3DSA:1.10.150.290 178 233 2.0E-29 T 28-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS24710 35d0903df80d67b1c0cfabc0bc1ccfd3 255 Pfam PF13489 Methyltransferase domain 12 143 6.6E-16 T 28-03-2018 AL504_RS24710 35d0903df80d67b1c0cfabc0bc1ccfd3 255 SUPERFAMILY SSF53335 5 203 1.66E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS24710 35d0903df80d67b1c0cfabc0bc1ccfd3 255 Gene3D G3DSA:3.40.50.150 1 177 8.1E-33 T 28-03-2018 AL504_RS24710 35d0903df80d67b1c0cfabc0bc1ccfd3 255 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 254 41.199 T 28-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS29280 c51844c7e0d911e43e057dd2fe39d279 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 121 8.3E-10 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS29280 c51844c7e0d911e43e057dd2fe39d279 131 Gene3D G3DSA:3.10.180.10 1 130 2.2E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS29280 c51844c7e0d911e43e057dd2fe39d279 131 SUPERFAMILY SSF54593 2 128 2.34E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS27965 67965813af8b5daaefce80cc0d890dcd 277 Gene3D G3DSA:3.30.70.100 173 265 3.1E-18 T 28-03-2018 AL504_RS27965 67965813af8b5daaefce80cc0d890dcd 277 SUPERFAMILY SSF50182 106 172 6.21E-15 T 28-03-2018 IPR010920 LSM domain AL504_RS27965 67965813af8b5daaefce80cc0d890dcd 277 SUPERFAMILY SSF82861 19 104 5.75E-18 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL504_RS27965 67965813af8b5daaefce80cc0d890dcd 277 Gene3D G3DSA:2.30.30.60 122 172 2.9E-11 T 28-03-2018 AL504_RS27965 67965813af8b5daaefce80cc0d890dcd 277 Pfam PF05552 Conserved TM helix 13 50 8.9E-7 T 28-03-2018 IPR008910 Conserved TM helix AL504_RS27965 67965813af8b5daaefce80cc0d890dcd 277 SUPERFAMILY SSF82689 173 269 6.41E-21 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL504_RS27965 67965813af8b5daaefce80cc0d890dcd 277 Pfam PF00924 Mechanosensitive ion channel 69 258 9.2E-45 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL504_RS18020 266048bb1cf912cf656918902ae7df38 134 SUPERFAMILY SSF141734 7 116 5.62E-48 T 28-03-2018 AL504_RS18020 266048bb1cf912cf656918902ae7df38 134 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 110 7.0E-25 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL504_RS18020 266048bb1cf912cf656918902ae7df38 134 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 7 111 33.249 T 28-03-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL504_RS18020 266048bb1cf912cf656918902ae7df38 134 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 107 7.9E-36 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL504_RS07150 6ac353993aea60da968835c9bc9b304a 522 PIRSF PIRSF002741 4 502 2.2E-87 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS07150 6ac353993aea60da968835c9bc9b304a 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 430 6.8E-82 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS07150 6ac353993aea60da968835c9bc9b304a 522 Gene3D G3DSA:3.40.190.10 191 284 2.2E-18 T 28-03-2018 AL504_RS07150 6ac353993aea60da968835c9bc9b304a 522 Gene3D G3DSA:3.90.76.10 42 190 2.2E-38 T 28-03-2018 AL504_RS07150 6ac353993aea60da968835c9bc9b304a 522 SUPERFAMILY SSF53850 29 497 4.52E-113 T 28-03-2018 AL504_RS07150 6ac353993aea60da968835c9bc9b304a 522 Gene3D G3DSA:3.10.105.10 285 488 1.3E-41 T 28-03-2018 AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 SMART SM00342 237 322 2.2E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 Gene3D G3DSA:1.10.10.60 190 275 1.4E-13 T 28-03-2018 AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 Pfam PF14525 AraC-binding-like domain 24 200 2.9E-28 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 Gene3D G3DSA:1.10.10.60 276 330 3.0E-12 T 28-03-2018 AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 SUPERFAMILY SSF46689 273 325 3.54E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 SUPERFAMILY SSF46689 222 271 4.93E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 Pfam PF12833 Helix-turn-helix domain 243 324 2.6E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS29795 41e972233f34c0d39b9188372d5c6773 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 318 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS29035 e9213918de3b9672480cfa8a9ebb868f 910 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 15 891 2.6E-277 T 28-03-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 AL504_RS29035 e9213918de3b9672480cfa8a9ebb868f 910 Gene3D G3DSA:3.20.20.80 20 792 7.8E-105 T 28-03-2018 AL504_RS29035 e9213918de3b9672480cfa8a9ebb868f 910 SUPERFAMILY SSF51445 207 452 1.3E-122 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29035 e9213918de3b9672480cfa8a9ebb868f 910 SUPERFAMILY SSF51445 496 791 1.3E-122 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29035 e9213918de3b9672480cfa8a9ebb868f 910 SUPERFAMILY SSF51445 15 176 1.3E-122 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29035 e9213918de3b9672480cfa8a9ebb868f 910 SMART SM00642 28 654 1.6E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29035 e9213918de3b9672480cfa8a9ebb868f 910 Pfam PF00128 Alpha amylase, catalytic domain 35 110 5.6E-15 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 Gene3D G3DSA:1.20.120.30 15 187 1.8E-25 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 Gene3D G3DSA:1.10.287.950 326 517 3.6E-51 T 28-03-2018 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 Gene3D G3DSA:1.10.287.1060 238 325 0.0031 T 28-03-2018 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 Pfam PF00672 HAMP domain 213 261 5.8E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 SUPERFAMILY SSF47170 17 179 1.2E-9 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 Pfam PF02203 Tar ligand binding domain homologue 2 151 3.8E-15 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 SMART SM00304 213 265 6.6E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 SUPERFAMILY SSF58104 233 518 1.83E-78 T 28-03-2018 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 6.6E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 6.6E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 51 66 6.6E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 6.6E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 6.6E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 481 4.6E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06385 f26de323870b5b28bff8fed7cbb28946 538 SMART SM00283 266 513 2.8E-97 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS01495 adc345b7de136ec3e22e753abe800d94 578 SMART SM00990 441 555 3.2E-40 T 28-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL504_RS01495 adc345b7de136ec3e22e753abe800d94 578 Pfam PF08774 VRR-NUC domain 444 555 2.3E-27 T 28-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL504_RS01495 adc345b7de136ec3e22e753abe800d94 578 Gene3D G3DSA:1.25.40.10 5 514 5.7E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 Pfam PF08245 Mur ligase middle domain 53 267 2.1E-11 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 51 74 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 SUPERFAMILY SSF53623 11 289 3.4E-85 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 Gene3D G3DSA:3.90.190.20 293 436 1.2E-28 T 28-03-2018 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 SUPERFAMILY SSF53244 291 431 5.86E-31 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 Gene3D G3DSA:3.40.1190.10 3 292 4.0E-75 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 PIRSF PIRSF001563 8 436 7.4E-101 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL504_RS06245 4d8ea4513fdcc39b12ff982d626dc792 436 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 430 2.5E-96 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Gene3D G3DSA:3.90.480.10 414 634 3.7E-7 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 SUPERFAMILY SSF51905 7 195 9.07E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 637 758 2.7E-18 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Gene3D G3DSA:3.50.50.60 2 132 9.1E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 292 6.9E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 565 627 6.1E-11 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 SUPERFAMILY SSF56014 638 813 5.63E-49 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 13 805 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Gene3D G3DSA:3.30.413.10 636 818 2.6E-36 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.7E-14 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.7E-14 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.7E-14 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 1.7E-14 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Pfam PF04324 BFD-like [2Fe-2S] binding domain 427 475 2.1E-7 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 SUPERFAMILY SSF55124 518 646 2.13E-25 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 SUPERFAMILY SSF51905 155 314 6.94E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 1.9E-11 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 1.9E-11 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 240 254 1.9E-11 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 281 288 1.9E-11 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 Gene3D G3DSA:3.40.50.720 133 314 2.2E-27 T 28-03-2018 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00397 Sirohaem Fe-binding site signature 641 659 6.5E-7 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PRINTS PR00397 Sirohaem Fe-binding site signature 684 702 6.5E-7 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 PIRSF PIRSF037149 5 840 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AL504_RS24520 765eae6203f33ee4965ce5d119057c1a 850 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 684 700 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS00030 29ffcb2dd3d12946446c61c34b8530c4 139 ProDom PD031251 TRAK PLASMID ORIT BINDING TRANSFER SYSTEM DNA ORIT-BINDING SEQUENCING DIRECT 5 75 2.0E-27 T 28-03-2018 IPR035225 Protein of unknown function DUF5338 AL504_RS00030 29ffcb2dd3d12946446c61c34b8530c4 139 Pfam PF17273 Family of unknown function (DUF5338) 8 74 6.7E-26 T 28-03-2018 IPR035225 Protein of unknown function DUF5338 AL504_RS19145 98ae35ba9481e64d39809fb34e87f3d5 385 Gene3D G3DSA:3.50.50.60 2 113 4.0E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19145 98ae35ba9481e64d39809fb34e87f3d5 385 Gene3D G3DSA:3.30.9.10 182 324 1.4E-24 T 28-03-2018 AL504_RS19145 98ae35ba9481e64d39809fb34e87f3d5 385 SUPERFAMILY SSF54373 241 323 1.57E-10 T 28-03-2018 AL504_RS19145 98ae35ba9481e64d39809fb34e87f3d5 385 Pfam PF01266 FAD dependent oxidoreductase 19 359 1.4E-47 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS19145 98ae35ba9481e64d39809fb34e87f3d5 385 SUPERFAMILY SSF51905 325 381 3.33E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19145 98ae35ba9481e64d39809fb34e87f3d5 385 SUPERFAMILY SSF51905 19 241 3.33E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19145 98ae35ba9481e64d39809fb34e87f3d5 385 Gene3D G3DSA:3.30.9.10 114 181 5.9E-6 T 28-03-2018 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 SUPERFAMILY SSF51735 160 334 4.71E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 SMART SM00829 10 367 0.0013 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 4.3E-23 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.7E-222 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.8E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 SUPERFAMILY SSF50129 318 369 3.63E-12 T 28-03-2018 IPR011032 GroES-like AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 Gene3D G3DSA:3.90.180.10 1 188 4.4E-61 T 28-03-2018 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 Gene3D G3DSA:3.40.50.720 189 310 2.3E-24 T 28-03-2018 AL504_RS17520 c2b674375af86b7e61de1f4c6e2065b6 369 SUPERFAMILY SSF50129 1 186 1.49E-73 T 28-03-2018 IPR011032 GroES-like AL504_RS04220 faaefbb7d92bbc35417b318805ec5b8d 245 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 54 207 7.0E-35 T 28-03-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 SUPERFAMILY SSF54909 68 153 5.36E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 8.0E-24 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 SUPERFAMILY SSF46785 7 66 5.71E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 8.6E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 8.6E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 8.6E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 2.4E-20 T 28-03-2018 AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 Gene3D G3DSA:1.10.10.10 7 58 2.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 Gene3D G3DSA:3.30.70.920 59 155 1.7E-25 T 28-03-2018 AL504_RS15035 ef94157baffbaf0bfb4f0e204bbc77fa 156 SMART SM00344 7 116 2.4E-49 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS07250 3ae032d3305aebe58072513e0d8eb1a2 296 Gene3D G3DSA:3.30.450.40 102 282 7.2E-34 T 28-03-2018 IPR029016 GAF domain-like AL504_RS07250 3ae032d3305aebe58072513e0d8eb1a2 296 Pfam PF09339 IclR helix-turn-helix domain 34 85 1.7E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS07250 3ae032d3305aebe58072513e0d8eb1a2 296 SUPERFAMILY SSF46785 33 107 5.39E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07250 3ae032d3305aebe58072513e0d8eb1a2 296 Pfam PF01614 Bacterial transcriptional regulator 159 273 1.5E-12 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS07250 3ae032d3305aebe58072513e0d8eb1a2 296 SUPERFAMILY SSF55781 99 274 1.61E-36 T 28-03-2018 IPR029016 GAF domain-like AL504_RS07250 3ae032d3305aebe58072513e0d8eb1a2 296 SMART SM00346 32 123 7.0E-11 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS07250 3ae032d3305aebe58072513e0d8eb1a2 296 Gene3D G3DSA:1.10.10.10 23 101 3.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01215 891ec061a1884d17a145c757d2062fa0 322 SUPERFAMILY SSF51735 110 291 1.1E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01215 891ec061a1884d17a145c757d2062fa0 322 Gene3D G3DSA:3.40.50.720 132 306 4.0E-33 T 28-03-2018 AL504_RS01215 891ec061a1884d17a145c757d2062fa0 322 SMART SM00829 10 320 9.2E-39 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS01215 891ec061a1884d17a145c757d2062fa0 322 SUPERFAMILY SSF50129 1 142 1.89E-29 T 28-03-2018 IPR011032 GroES-like AL504_RS01215 891ec061a1884d17a145c757d2062fa0 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 3.7E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS01215 891ec061a1884d17a145c757d2062fa0 322 Pfam PF00107 Zinc-binding dehydrogenase 149 264 3.4E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS01215 891ec061a1884d17a145c757d2062fa0 322 Gene3D G3DSA:3.90.180.10 1 131 3.4E-34 T 28-03-2018 AL504_RS16675 52261164d2169c7b848ca5573f389878 304 Pfam PF03466 LysR substrate binding domain 90 298 3.1E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS16675 52261164d2169c7b848ca5573f389878 304 Gene3D G3DSA:3.40.190.10 83 188 6.2E-11 T 28-03-2018 AL504_RS16675 52261164d2169c7b848ca5573f389878 304 SUPERFAMILY SSF53850 93 295 5.79E-21 T 28-03-2018 AL504_RS16675 52261164d2169c7b848ca5573f389878 304 Gene3D G3DSA:1.10.10.10 1 82 7.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16675 52261164d2169c7b848ca5573f389878 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16675 52261164d2169c7b848ca5573f389878 304 SUPERFAMILY SSF46785 3 85 3.76E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16675 52261164d2169c7b848ca5573f389878 304 Gene3D G3DSA:3.40.190.10 189 272 3.2E-12 T 28-03-2018 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 Gene3D G3DSA:3.40.190.10 176 263 3.5E-19 T 28-03-2018 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 Gene3D G3DSA:1.10.10.10 1 82 1.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 SUPERFAMILY SSF46785 1 112 2.07E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 Gene3D G3DSA:3.40.190.10 92 175 1.4E-22 T 28-03-2018 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 SUPERFAMILY SSF53850 90 286 5.97E-36 T 28-03-2018 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02120 72e81a67e3a25d8e2d24c7c37087fe12 291 Pfam PF03466 LysR substrate binding domain 88 286 1.0E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 Pfam PF00344 SecY translocase 74 412 5.2E-119 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 1.0E-96 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 Gene3D G3DSA:1.10.3370.10 9 434 1.6E-165 T 28-03-2018 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 SUPERFAMILY SSF103491 13 419 3.27E-135 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 428 29.859 T 28-03-2018 IPR026593 Protein translocase subunit SecY AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 PIRSF PIRSF004557 9 435 2.3E-127 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS20000 7d81b6d2d0ff346918888f2094018d6f 441 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 424 1.4E-136 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS28475 1d8664652c7db259cbbdeea38feee067 378 Pfam PF10531 SLBB domain 183 234 2.9E-10 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS28475 1d8664652c7db259cbbdeea38feee067 378 Pfam PF10531 SLBB domain 267 313 3.4E-4 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS28475 1d8664652c7db259cbbdeea38feee067 378 Gene3D G3DSA:1.20.5.70 352 377 5.3E-8 T 28-03-2018 AL504_RS28475 1d8664652c7db259cbbdeea38feee067 378 Gene3D G3DSA:3.30.1950.10 87 171 8.7E-22 T 28-03-2018 AL504_RS28475 1d8664652c7db259cbbdeea38feee067 378 Gene3D G3DSA:3.10.560.10 172 260 1.6E-23 T 28-03-2018 AL504_RS28475 1d8664652c7db259cbbdeea38feee067 378 Gene3D G3DSA:3.10.560.10 261 351 1.3E-17 T 28-03-2018 AL504_RS28475 1d8664652c7db259cbbdeea38feee067 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 176 1.5E-25 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL504_RS25650 f94e48373fb78d09f1fc45f38d787e1d 337 Gene3D G3DSA:3.20.20.30 2 326 2.9E-81 T 28-03-2018 AL504_RS25650 f94e48373fb78d09f1fc45f38d787e1d 337 Pfam PF00296 Luciferase-like monooxygenase 19 297 5.8E-58 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS25650 f94e48373fb78d09f1fc45f38d787e1d 337 SUPERFAMILY SSF51679 1 326 9.29E-80 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 Gene3D G3DSA:3.90.180.10 3 191 3.1E-48 T 28-03-2018 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 Gene3D G3DSA:3.40.50.20 260 341 7.7E-6 T 28-03-2018 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 Gene3D G3DSA:3.40.50.20 192 259 3.6E-16 T 28-03-2018 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 5.2E-26 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 SUPERFAMILY SSF50129 5 171 1.57E-45 T 28-03-2018 IPR011032 GroES-like AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 SMART SM00829 13 342 3.9E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 1.6E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 SUPERFAMILY SSF51735 151 312 2.6E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29195 df3756cbea9f0144f872456aad2669ac 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL504_RS08525 a2cfec4d908963e07dba57f3a5a5435b 593 SUPERFAMILY SSF52016 381 577 4.71E-46 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS08525 a2cfec4d908963e07dba57f3a5a5435b 593 SUPERFAMILY SSF143975 6 378 9.02E-115 T 28-03-2018 AL504_RS08525 a2cfec4d908963e07dba57f3a5a5435b 593 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 127 137 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS08525 a2cfec4d908963e07dba57f3a5a5435b 593 Pfam PF00920 Dehydratase family 44 570 1.2E-153 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 Pfam PF00175 Oxidoreductase NAD-binding domain 121 227 5.2E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 Gene3D G3DSA:3.10.20.30 240 362 9.6E-30 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 137 4.3E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 143 152 4.3E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 155 166 4.3E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 57 64 4.3E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 Gene3D G3DSA:2.40.30.10 2 95 3.9E-23 T 28-03-2018 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 SUPERFAMILY SSF52343 96 244 2.62E-32 T 28-03-2018 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 276 349 9.5E-16 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 6 359 1.6E-141 T 28-03-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 SUPERFAMILY SSF63380 3 107 1.28E-27 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 307 315 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 Pfam PF00970 Oxidoreductase FAD-binding domain 10 105 2.3E-12 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00406 Cytochrome B5 reductase signature 155 166 2.7E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00406 Cytochrome B5 reductase signature 214 222 2.7E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00406 Cytochrome B5 reductase signature 93 107 2.7E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 PRINTS PR00406 Cytochrome B5 reductase signature 118 137 2.7E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 SUPERFAMILY SSF54292 237 359 2.83E-28 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS11205 92d9065f859f0f88046154f4af557d43 362 Gene3D G3DSA:3.40.50.80 96 239 1.6E-26 T 28-03-2018 AL504_RS17040 ae7af08c03738e6de058a89d250339b6 300 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 8 299 6.8E-123 T 28-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AL504_RS17040 ae7af08c03738e6de058a89d250339b6 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 286 1.6E-54 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS17040 ae7af08c03738e6de058a89d250339b6 300 Gene3D G3DSA:1.10.3470.10 1 289 2.7E-49 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS08800 8ab904824256be874486cde5e925b095 122 Gene3D G3DSA:3.10.450.40 4 119 1.9E-9 T 28-03-2018 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 Pfam PF00701 Dihydrodipicolinate synthetase family 9 292 6.6E-69 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 SMART SM01130 8 297 1.3E-100 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 170 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 SUPERFAMILY SSF51569 9 296 1.78E-83 T 28-03-2018 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 PIRSF PIRSF001365 5 300 1.4E-75 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 2.3E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 2.3E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 2.3E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 2.3E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 Gene3D G3DSA:3.20.20.70 3 301 6.3E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 8 295 45.136 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS23575 7f0ba9a42aa548f2d824d1fe28422f50 301 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 12 293 1.4E-76 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS10680 368e66f7a6cd54358b5bd01087b9028b 239 Pfam PF03741 Integral membrane protein TerC family 14 190 7.8E-44 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL504_RS10680 368e66f7a6cd54358b5bd01087b9028b 239 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 191 1.2E-71 T 28-03-2018 IPR022301 Integral membrane protein YjbE AL504_RS28710 45fc057023ea6065de1b2a8ea9395e91 360 Pfam PF00529 HlyD membrane-fusion protein of T1SS 12 323 1.1E-6 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS28710 45fc057023ea6065de1b2a8ea9395e91 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 36 265 1.9E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS28710 45fc057023ea6065de1b2a8ea9395e91 360 SUPERFAMILY SSF111369 141 242 5.49E-8 T 28-03-2018 AL504_RS28710 45fc057023ea6065de1b2a8ea9395e91 360 Gene3D G3DSA:1.20.1600.10 2 357 3.4E-18 T 28-03-2018 AL504_RS28710 45fc057023ea6065de1b2a8ea9395e91 360 SUPERFAMILY SSF111369 36 120 1.31E-8 T 28-03-2018 AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 PIRSF PIRSF000485 1 482 2.0E-155 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 Pfam PF00156 Phosphoribosyl transferase domain 285 395 4.6E-8 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 Pfam PF13522 Glutamine amidotransferase domain 64 210 3.8E-16 T 28-03-2018 AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 2.2E-157 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.299 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 SUPERFAMILY SSF53271 252 483 2.81E-73 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 SUPERFAMILY SSF56235 2 259 1.63E-68 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 Gene3D G3DSA:3.40.50.2020 236 451 4.1E-38 T 28-03-2018 AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 Gene3D G3DSA:3.60.20.10 7 147 2.4E-29 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS06230 38bee70a7d6a5aba6cffb9e2437bbb4e 506 Gene3D G3DSA:3.60.20.10 148 235 2.5E-20 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 Pfam PF00270 DEAD/DEAH box helicase 159 324 1.2E-10 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 TIGRFAM TIGR00595 priA: primosomal protein N' 178 699 2.0E-170 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 SUPERFAMILY SSF52540 173 402 1.06E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 SUPERFAMILY SSF52540 468 565 1.06E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 Pfam PF00271 Helicase conserved C-terminal domain 459 553 1.9E-5 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 SMART SM00490 457 554 5.7E-7 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 Gene3D G3DSA:3.40.50.300 351 596 6.7E-21 T 28-03-2018 AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 SMART SM00487 153 357 8.0E-13 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 Hamap MF_00983 Probable primosomal protein N' [priA]. 23 701 23.647 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL504_RS16895 3443cdea3e490d00864084812f216c8c 701 Gene3D G3DSA:3.40.50.300 138 339 7.1E-23 T 28-03-2018 AL504_RS31240 0721013654180cbb4944cfef46086944 399 Gene3D G3DSA:3.90.1150.10 304 399 3.5E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS31240 0721013654180cbb4944cfef46086944 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL504_RS31240 0721013654180cbb4944cfef46086944 399 Gene3D G3DSA:3.40.640.10 71 303 7.2E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS31240 0721013654180cbb4944cfef46086944 399 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.1E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL504_RS31240 0721013654180cbb4944cfef46086944 399 PRINTS PR00799 Aspartate aminotransferase signature 209 221 1.1E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL504_RS31240 0721013654180cbb4944cfef46086944 399 PRINTS PR00799 Aspartate aminotransferase signature 344 362 1.1E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL504_RS31240 0721013654180cbb4944cfef46086944 399 PRINTS PR00799 Aspartate aminotransferase signature 178 197 1.1E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL504_RS31240 0721013654180cbb4944cfef46086944 399 SUPERFAMILY SSF53383 2 398 2.48E-121 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS31240 0721013654180cbb4944cfef46086944 399 Gene3D G3DSA:3.90.1150.10 3 70 1.2E-13 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS31240 0721013654180cbb4944cfef46086944 399 Pfam PF00155 Aminotransferase class I and II 31 394 2.9E-79 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 SMART SM00387 315 428 3.2E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 5.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 5.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 5.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 5.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 Gene3D G3DSA:3.30.565.10 284 434 1.5E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 Gene3D G3DSA:1.10.287.130 209 267 5.4E-21 T 28-03-2018 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 SUPERFAMILY SSF55874 262 425 4.19E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 SUPERFAMILY SSF47384 190 271 1.22E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 2.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 SMART SM00388 203 272 1.3E-24 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 271 4.1E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 SUPERFAMILY SSF55785 87 195 4.95E-6 T 28-03-2018 IPR000014 PAS domain AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 6.1E-123 T 28-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 Gene3D G3DSA:3.30.450.20 93 208 8.1E-10 T 28-03-2018 AL504_RS16480 294e3e7aa0698836322e79c595401b6d 435 Pfam PF11808 Domain of unknown function (DUF3329) 3 83 4.2E-13 T 28-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 AL504_RS00735 70fb6b5440ef22c6ad2a1e4272562118 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00735 70fb6b5440ef22c6ad2a1e4272562118 299 SUPERFAMILY SSF46785 4 85 2.72E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00735 70fb6b5440ef22c6ad2a1e4272562118 299 Pfam PF03466 LysR substrate binding domain 88 290 2.5E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00735 70fb6b5440ef22c6ad2a1e4272562118 299 Gene3D G3DSA:1.10.10.10 3 84 2.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00735 70fb6b5440ef22c6ad2a1e4272562118 299 Gene3D G3DSA:3.40.190.10 89 175 1.7E-14 T 28-03-2018 AL504_RS00735 70fb6b5440ef22c6ad2a1e4272562118 299 SUPERFAMILY SSF53850 87 296 2.17E-40 T 28-03-2018 AL504_RS00735 70fb6b5440ef22c6ad2a1e4272562118 299 Gene3D G3DSA:3.40.190.10 176 265 2.0E-22 T 28-03-2018 AL504_RS22870 953cab1d7bb65f18d68b1df108d3fc8f 522 Pfam PF12792 CSS motif domain associated with EAL 37 202 5.9E-23 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AL504_RS22870 953cab1d7bb65f18d68b1df108d3fc8f 522 Gene3D G3DSA:3.20.20.450 254 515 5.4E-80 T 28-03-2018 IPR001633 EAL domain AL504_RS22870 953cab1d7bb65f18d68b1df108d3fc8f 522 Pfam PF00563 EAL domain 266 497 5.4E-62 T 28-03-2018 IPR001633 EAL domain AL504_RS22870 953cab1d7bb65f18d68b1df108d3fc8f 522 SUPERFAMILY SSF141868 266 510 8.5E-75 T 28-03-2018 IPR001633 EAL domain AL504_RS22870 953cab1d7bb65f18d68b1df108d3fc8f 522 SMART SM00052 260 502 3.3E-92 T 28-03-2018 IPR001633 EAL domain AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 293 1.2E-123 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 Gene3D G3DSA:3.40.50.150 99 273 4.0E-40 T 28-03-2018 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 Pfam PF05175 Methyltransferase small domain 130 213 4.7E-16 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 Gene3D G3DSA:1.10.8.10 10 98 1.2E-14 T 28-03-2018 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 298 52.739 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 296 1.1E-72 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 PIRSF PIRSF037167 1 298 4.1E-130 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 202 208 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL504_RS30750 e44dfc4a2f51c92e2348f5dbefa865a5 298 SUPERFAMILY SSF53335 12 265 1.67E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS03165 0719ec605c3489c4e950009547581890 250 Gene3D G3DSA:3.40.50.300 1 249 4.4E-73 T 28-03-2018 AL504_RS03165 0719ec605c3489c4e950009547581890 250 SUPERFAMILY SSF52540 1 245 1.39E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03165 0719ec605c3489c4e950009547581890 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03165 0719ec605c3489c4e950009547581890 250 SMART SM00382 26 223 1.7E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03165 0719ec605c3489c4e950009547581890 250 PIRSF PIRSF039085 1 250 1.0E-116 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS03165 0719ec605c3489c4e950009547581890 250 Pfam PF00005 ABC transporter 17 175 1.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 133 222 7.5E-20 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.5E-27 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 SUPERFAMILY SSF46946 134 225 1.62E-25 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 Pfam PF06827 Zinc finger found in FPG and IleRS 246 274 1.5E-12 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 SMART SM00898 2 115 2.2E-46 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 Gene3D G3DSA:1.10.8.50 135 275 1.8E-44 T 28-03-2018 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 1.3E-82 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 SUPERFAMILY SSF81624 2 142 3.53E-38 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 SMART SM01232 133 225 5.9E-39 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 SUPERFAMILY SSF57716 221 274 3.33E-16 T 28-03-2018 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 39.392 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL504_RS23250 77a8b2586ba2ec71f6547415375640fb 275 Gene3D G3DSA:3.20.190.10 2 134 5.6E-36 T 28-03-2018 AL504_RS06950 04461058f32d4659eed6756a62a52df6 194 Pfam PF13302 Acetyltransferase (GNAT) domain 8 142 7.1E-22 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS06950 04461058f32d4659eed6756a62a52df6 194 Gene3D G3DSA:3.40.630.30 5 174 2.9E-38 T 28-03-2018 AL504_RS06950 04461058f32d4659eed6756a62a52df6 194 SUPERFAMILY SSF55729 6 166 1.22E-43 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS01845 d70350143f5c9e69032f2e4c8fb0fc02 283 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 204 269 3.5E-11 T 28-03-2018 AL504_RS01845 d70350143f5c9e69032f2e4c8fb0fc02 283 Gene3D G3DSA:3.30.1380.10 148 269 6.2E-19 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL504_RS01845 d70350143f5c9e69032f2e4c8fb0fc02 283 SUPERFAMILY SSF55166 151 266 2.88E-20 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL504_RS23625 af01820dffac1c90ef89b9f08f8fc92a 173 SUPERFAMILY SSF51182 10 131 1.52E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS23625 af01820dffac1c90ef89b9f08f8fc92a 173 Gene3D G3DSA:2.60.120.10 43 136 2.6E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23625 af01820dffac1c90ef89b9f08f8fc92a 173 Pfam PF07883 Cupin domain 63 131 7.2E-11 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS00905 ff5cb89eadb103cb9c4fec401a1c1a6a 637 Gene3D G3DSA:3.20.20.70 364 569 2.7E-22 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS00905 ff5cb89eadb103cb9c4fec401a1c1a6a 637 Gene3D G3DSA:3.40.50.280 152 293 3.1E-9 T 28-03-2018 AL504_RS00905 ff5cb89eadb103cb9c4fec401a1c1a6a 637 Pfam PF04055 Radical SAM superfamily 366 527 1.5E-10 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS00905 ff5cb89eadb103cb9c4fec401a1c1a6a 637 SMART SM00729 363 576 4.9E-15 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS00905 ff5cb89eadb103cb9c4fec401a1c1a6a 637 SUPERFAMILY SSF102114 340 531 9.29E-26 T 28-03-2018 AL504_RS24185 36f06a6856c620fa850069834fbcb946 692 Pfam PF02585 GlcNAc-PI de-N-acetylase 42 231 4.7E-17 T 28-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AL504_RS24185 36f06a6856c620fa850069834fbcb946 692 Gene3D G3DSA:2.120.10.70 294 530 3.5E-21 T 28-03-2018 AL504_RS24185 36f06a6856c620fa850069834fbcb946 692 Gene3D G3DSA:2.120.10.70 531 692 0.24 T 28-03-2018 AL504_RS24185 36f06a6856c620fa850069834fbcb946 692 Gene3D G3DSA:3.40.50.10320 40 293 7.1E-27 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AL504_RS24185 36f06a6856c620fa850069834fbcb946 692 SUPERFAMILY SSF89372 300 517 4.18E-14 T 28-03-2018 AL504_RS24185 36f06a6856c620fa850069834fbcb946 692 SUPERFAMILY SSF102588 41 100 2.49E-15 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AL504_RS24185 36f06a6856c620fa850069834fbcb946 692 SUPERFAMILY SSF102588 145 235 2.49E-15 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AL504_RS08085 fa71ab6bd412b5b32a118e80c892bce5 639 Pfam PF00326 Prolyl oligopeptidase family 427 638 7.1E-47 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL504_RS08085 fa71ab6bd412b5b32a118e80c892bce5 639 Gene3D G3DSA:3.40.50.1820 372 639 4.2E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS08085 fa71ab6bd412b5b32a118e80c892bce5 639 SUPERFAMILY SSF50993 103 367 1.36E-13 T 28-03-2018 AL504_RS08085 fa71ab6bd412b5b32a118e80c892bce5 639 Gene3D G3DSA:2.130.10.120 149 371 1.7E-22 T 28-03-2018 AL504_RS08085 fa71ab6bd412b5b32a118e80c892bce5 639 SUPERFAMILY SSF53474 382 638 4.61E-72 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS08085 fa71ab6bd412b5b32a118e80c892bce5 639 Gene3D G3DSA:2.140.10.30 30 148 3.6E-6 T 28-03-2018 AL504_RS18445 44278afc7351d5479aa17a69d025d364 535 PIRSF PIRSF002741 3 528 4.5E-89 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS18445 44278afc7351d5479aa17a69d025d364 535 Gene3D G3DSA:3.90.76.10 38 182 4.5E-36 T 28-03-2018 AL504_RS18445 44278afc7351d5479aa17a69d025d364 535 Gene3D G3DSA:3.40.190.10 184 294 1.3E-24 T 28-03-2018 AL504_RS18445 44278afc7351d5479aa17a69d025d364 535 Gene3D G3DSA:3.10.105.10 295 508 9.7E-46 T 28-03-2018 AL504_RS18445 44278afc7351d5479aa17a69d025d364 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 450 8.7E-92 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS18445 44278afc7351d5479aa17a69d025d364 535 SUPERFAMILY SSF53850 23 518 4.52E-127 T 28-03-2018 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Pfam PF00158 Sigma-54 interaction domain 338 492 1.8E-56 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Gene3D G3DSA:3.30.450.40 27 214 1.6E-9 T 28-03-2018 IPR029016 GAF domain-like AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Pfam PF02954 Bacterial regulatory protein, Fis family 590 619 1.2E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Gene3D G3DSA:3.40.50.300 329 496 1.6E-21 T 28-03-2018 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Pfam PF01590 GAF domain 71 202 1.3E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Gene3D G3DSA:1.10.8.60 497 566 5.9E-9 T 28-03-2018 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Gene3D G3DSA:1.10.10.10 609 629 0.0026 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 349 362 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 SUPERFAMILY SSF52540 341 562 3.55E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 606 626 1.4E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 589 606 1.4E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 SUPERFAMILY SSF46689 577 625 7.94E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 SUPERFAMILY SSF55781 121 202 8.18E-7 T 28-03-2018 IPR029016 GAF domain-like AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 SMART SM00382 345 489 3.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17145 1cebd95e9811b4e89d4c8cfefddd4690 629 Gene3D G3DSA:1.10.10.60 578 608 1.5E-11 T 28-03-2018 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 Gene3D G3DSA:2.60.120.10 6 178 1.8E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 Gene3D G3DSA:1.10.10.60 179 223 3.6E-12 T 28-03-2018 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 SUPERFAMILY SSF46689 223 272 1.0E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 SMART SM00342 187 269 3.2E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 Gene3D G3DSA:1.10.10.60 224 274 1.8E-12 T 28-03-2018 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 Pfam PF12833 Helix-turn-helix domain 193 271 4.1E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 SUPERFAMILY SSF46689 171 218 1.43E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 SUPERFAMILY SSF51215 17 155 6.28E-19 T 28-03-2018 AL504_RS02160 99a1b19235061c0bebf6762c55abb09c 274 Pfam PF02311 AraC-like ligand binding domain 24 151 8.6E-23 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS16350 214849ce1d90e8d1528aa933991b6cdb 328 SUPERFAMILY SSF53850 117 296 3.86E-17 T 28-03-2018 AL504_RS16350 214849ce1d90e8d1528aa933991b6cdb 328 PIRSF PIRSF017082 1 328 1.3E-68 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16350 214849ce1d90e8d1528aa933991b6cdb 328 Gene3D G3DSA:3.40.190.10 126 235 1.3E-11 T 28-03-2018 AL504_RS16350 214849ce1d90e8d1528aa933991b6cdb 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 324 1.4E-67 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 SUPERFAMILY SSF55666 171 254 2.75E-23 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 Pfam PF01138 3' exoribonuclease family, domain 1 28 158 1.8E-19 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 20 254 1.3E-113 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 SUPERFAMILY SSF54211 19 199 9.11E-45 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 Pfam PF03725 3' exoribonuclease family, domain 2 176 240 1.5E-11 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 Hamap MF_00564 Ribonuclease PH [rph]. 19 255 48.455 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 Gene3D G3DSA:3.30.230.70 5 255 7.4E-56 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL504_RS04850 1ef73db30eade4123fd421a640bde3dc 255 ProSitePatterns PS01277 Ribonuclease PH signature. 134 146 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 SUPERFAMILY SSF46785 1 81 2.32E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 Pfam PF03466 LysR substrate binding domain 88 294 1.8E-16 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 7.5E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 Gene3D G3DSA:3.40.190.10 88 186 3.0E-6 T 28-03-2018 AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 Gene3D G3DSA:1.10.10.10 1 83 2.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 Gene3D G3DSA:3.40.190.10 187 264 2.7E-4 T 28-03-2018 AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24660 0c0703f641358ee6436265625aa8866a 299 SUPERFAMILY SSF53850 88 297 4.16E-14 T 28-03-2018 AL504_RS22425 f7fc471271f43f32c5fc0ea7ef9ebb51 206 SUPERFAMILY SSF52833 1 85 2.11E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS22425 f7fc471271f43f32c5fc0ea7ef9ebb51 206 SUPERFAMILY SSF47616 72 202 3.62E-29 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS22425 f7fc471271f43f32c5fc0ea7ef9ebb51 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 195 2.4E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS22425 f7fc471271f43f32c5fc0ea7ef9ebb51 206 Gene3D G3DSA:3.40.30.10 1 94 1.9E-25 T 28-03-2018 AL504_RS22425 f7fc471271f43f32c5fc0ea7ef9ebb51 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 78 8.1E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS22425 f7fc471271f43f32c5fc0ea7ef9ebb51 206 Gene3D G3DSA:1.20.1050.10 95 203 4.7E-23 T 28-03-2018 AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 Gene3D G3DSA:3.40.50.970 57 467 7.3E-76 T 28-03-2018 AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 SUPERFAMILY SSF52922 700 881 3.31E-56 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 SUPERFAMILY SSF52518 58 467 4.98E-121 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 Gene3D G3DSA:3.40.50.970 472 704 3.8E-63 T 28-03-2018 AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 Gene3D G3DSA:3.40.50.920 705 885 5.4E-40 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 PIRSF PIRSF000156 1 885 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 SUPERFAMILY SSF52518 473 698 7.95E-95 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 882 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL504_RS07805 4c37017424265d15a51a17871f1bfb2f 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 112 293 8.7E-6 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS10470 384f4d92f973135068b886e593444939 203 Gene3D G3DSA:3.40.30.10 1 89 2.4E-21 T 28-03-2018 AL504_RS10470 384f4d92f973135068b886e593444939 203 Gene3D G3DSA:1.20.1050.10 90 203 4.6E-23 T 28-03-2018 AL504_RS10470 384f4d92f973135068b886e593444939 203 SUPERFAMILY SSF52833 1 100 6.87E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS10470 384f4d92f973135068b886e593444939 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 1.4E-18 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS10470 384f4d92f973135068b886e593444939 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 120 187 7.1E-8 T 28-03-2018 AL504_RS10470 384f4d92f973135068b886e593444939 203 SUPERFAMILY SSF47616 69 201 7.8E-26 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS08350 aa0104ed72c5c5ef446619c114bab72f 340 SUPERFAMILY SSF46589 16 100 1.05E-19 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL504_RS08350 aa0104ed72c5c5ef446619c114bab72f 340 SUPERFAMILY SSF55681 93 339 5.25E-76 T 28-03-2018 AL504_RS08350 aa0104ed72c5c5ef446619c114bab72f 340 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 338 45.645 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AL504_RS08350 aa0104ed72c5c5ef446619c114bab72f 340 Gene3D G3DSA:3.30.930.10 8 340 5.3E-85 T 28-03-2018 AL504_RS08350 aa0104ed72c5c5ef446619c114bab72f 340 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 339 2.5E-96 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL504_RS08350 aa0104ed72c5c5ef446619c114bab72f 340 Pfam PF01409 tRNA synthetases class II core domain (F) 93 338 2.4E-92 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AL504_RS08350 aa0104ed72c5c5ef446619c114bab72f 340 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 6.9E-21 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL504_RS07385 2b572a543cf8df9f0f7f408e0ec8d9dd 226 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 49 223 4.6E-44 T 28-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AL504_RS07385 2b572a543cf8df9f0f7f408e0ec8d9dd 226 SUPERFAMILY SSF54001 48 223 8.24E-44 T 28-03-2018 AL504_RS07385 2b572a543cf8df9f0f7f408e0ec8d9dd 226 Gene3D G3DSA:3.90.1720.10 45 226 9.1E-40 T 28-03-2018 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 Gene3D G3DSA:1.10.3860.10 1 411 1.7E-118 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 SUPERFAMILY SSF118215 6 405 4.58E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 6.1E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS26000 c7db71498a6d9545cf5ef6a970d8dd69 425 Pfam PF00375 Sodium:dicarboxylate symporter family 9 404 6.2E-112 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 456 1.4E-62 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 Hamap MF_00186 Glycerol kinase [glpK]. 4 503 56.971 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 502 9.4E-216 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 252 4.8E-80 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 Gene3D G3DSA:3.30.420.40 249 507 1.4E-80 T 28-03-2018 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 PIRSF PIRSF000538 4 507 2.6E-176 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 SUPERFAMILY SSF53067 255 502 6.69E-82 T 28-03-2018 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 Gene3D G3DSA:3.30.420.40 1 248 5.7E-91 T 28-03-2018 AL504_RS16195 5bf76582a337e0c081b885a96c7565d8 507 SUPERFAMILY SSF53067 6 255 4.79E-95 T 28-03-2018 AL504_RS28460 078c86d90d5f2a2dbea55906b27ec6af 476 Pfam PF00483 Nucleotidyl transferase 10 293 9.7E-59 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL504_RS28460 078c86d90d5f2a2dbea55906b27ec6af 476 Gene3D G3DSA:3.90.550.10 8 343 1.7E-92 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS28460 078c86d90d5f2a2dbea55906b27ec6af 476 Pfam PF01050 Mannose-6-phosphate isomerase 321 471 1.1E-70 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AL504_RS28460 078c86d90d5f2a2dbea55906b27ec6af 476 SUPERFAMILY SSF53448 8 285 2.3E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS28460 078c86d90d5f2a2dbea55906b27ec6af 476 SUPERFAMILY SSF51182 191 475 2.42E-80 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS28460 078c86d90d5f2a2dbea55906b27ec6af 476 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 10 475 4.3E-199 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AL504_RS28460 078c86d90d5f2a2dbea55906b27ec6af 476 Gene3D G3DSA:2.60.120.10 344 453 2.5E-31 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS02265 ef1385438eff9a8850be384ed7ce0870 247 SMART SM00062 28 245 8.8E-72 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS02265 ef1385438eff9a8850be384ed7ce0870 247 Gene3D G3DSA:3.40.190.10 168 247 7.5E-13 T 28-03-2018 AL504_RS02265 ef1385438eff9a8850be384ed7ce0870 247 SUPERFAMILY SSF53850 9 243 6.29E-72 T 28-03-2018 AL504_RS02265 ef1385438eff9a8850be384ed7ce0870 247 SMART SM00079 28 244 1.5E-6 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL504_RS02265 ef1385438eff9a8850be384ed7ce0870 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS02265 ef1385438eff9a8850be384ed7ce0870 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 243 1.7E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS02265 ef1385438eff9a8850be384ed7ce0870 247 Gene3D G3DSA:3.40.190.10 18 167 2.2E-44 T 28-03-2018 AL504_RS20365 799b0a24b89f28843b6a35a94c6c3b76 345 SUPERFAMILY SSF51269 282 344 4.84E-11 T 28-03-2018 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 AL504_RS20365 799b0a24b89f28843b6a35a94c6c3b76 345 SUPERFAMILY SSF51569 3 279 9.04E-45 T 28-03-2018 AL504_RS20365 799b0a24b89f28843b6a35a94c6c3b76 345 SMART SM00858 287 345 6.0E-6 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS20365 799b0a24b89f28843b6a35a94c6c3b76 345 Pfam PF03102 NeuB family 27 270 5.4E-45 T 28-03-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AL504_RS20365 799b0a24b89f28843b6a35a94c6c3b76 345 Gene3D G3DSA:3.90.1210.10 278 344 2.4E-15 T 28-03-2018 AL504_RS20365 799b0a24b89f28843b6a35a94c6c3b76 345 Gene3D G3DSA:3.20.20.70 1 272 2.0E-51 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS20365 799b0a24b89f28843b6a35a94c6c3b76 345 Pfam PF08666 SAF domain 291 344 1.6E-7 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 36 692 1.6E-186 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 Pfam PF03958 Bacterial type II/III secretion system short domain 291 430 1.5E-10 T 28-03-2018 IPR005644 NolW-like AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 Pfam PF03958 Bacterial type II/III secretion system short domain 154 213 4.0E-13 T 28-03-2018 IPR005644 NolW-like AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 Pfam PF03958 Bacterial type II/III secretion system short domain 218 285 1.4E-11 T 28-03-2018 IPR005644 NolW-like AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 PRINTS PR00811 Bacterial general secretion pathway protein D signature 513 537 3.5E-29 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 PRINTS PR00811 Bacterial general secretion pathway protein D signature 670 684 3.5E-29 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 PRINTS PR00811 Bacterial general secretion pathway protein D signature 430 440 3.5E-29 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 PRINTS PR00811 Bacterial general secretion pathway protein D signature 647 665 3.5E-29 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 PRINTS PR00811 Bacterial general secretion pathway protein D signature 548 558 3.5E-29 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 SUPERFAMILY SSF110997 801 870 3.66E-6 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 Pfam PF00263 Bacterial type II and III secretion system protein 517 683 3.8E-51 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL504_RS06860 b857665cca62ade86b918e5a6d01b461 873 Gene3D G3DSA:3.30.70.1070 803 872 3.0E-4 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS25340 7687d18aa2cf758e5eb1eafb00ff1833 150 TIGRFAM TIGR02695 azurin: azurin 24 148 1.7E-62 T 28-03-2018 IPR014068 Azurin AL504_RS25340 7687d18aa2cf758e5eb1eafb00ff1833 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 22 148 4.6E-32 T 28-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AL504_RS25340 7687d18aa2cf758e5eb1eafb00ff1833 150 Gene3D G3DSA:2.60.40.420 22 148 3.9E-13 T 28-03-2018 IPR008972 Cupredoxin AL504_RS25340 7687d18aa2cf758e5eb1eafb00ff1833 150 SUPERFAMILY SSF49503 22 148 1.51E-47 T 28-03-2018 IPR008972 Cupredoxin AL504_RS25340 7687d18aa2cf758e5eb1eafb00ff1833 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 28 146 6.0E-65 T 28-03-2018 AL504_RS25340 7687d18aa2cf758e5eb1eafb00ff1833 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 126 142 - T 28-03-2018 IPR028871 Blue (type 1) copper protein, binding site AL504_RS01740 b692c98d1383024d57232b6870eacd38 185 SUPERFAMILY SSF160631 22 159 2.22E-7 T 28-03-2018 AL504_RS01740 b692c98d1383024d57232b6870eacd38 185 Gene3D G3DSA:3.40.1580.10 8 169 1.8E-10 T 28-03-2018 AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 Gene3D G3DSA:3.30.300.30 341 462 7.9E-12 T 28-03-2018 AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 Pfam PF00501 AMP-binding enzyme 31 292 5.4E-12 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 134 145 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 SUPERFAMILY SSF54637 465 557 2.49E-12 T 28-03-2018 IPR029069 HotDog domain AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 SUPERFAMILY SSF56801 25 436 2.22E-46 T 28-03-2018 AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 Gene3D G3DSA:3.40.50.980 140 289 8.7E-21 T 28-03-2018 AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 Gene3D G3DSA:3.10.129.10 463 563 7.1E-17 T 28-03-2018 AL504_RS07995 98730996d6bcf523d080b7f8087b50c1 566 Gene3D G3DSA:3.40.50.980 11 139 2.0E-8 T 28-03-2018 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 SUPERFAMILY SSF47203 231 396 1.02E-22 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 Gene3D G3DSA:1.20.140.10 219 396 3.5E-37 T 28-03-2018 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 Gene3D G3DSA:2.40.110.10 121 218 6.8E-37 T 28-03-2018 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.6E-18 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 Gene3D G3DSA:1.10.540.10 1 120 3.7E-23 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 393 5.6E-24 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 211 9.3E-23 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS14275 c3a3ad939f93ec7fe996017e7cf90161 396 SUPERFAMILY SSF56645 2 244 1.57E-77 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS12430 854306b82d2faf0d5ef5b548b08fb2e5 314 SUPERFAMILY SSF52141 130 311 5.56E-61 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS12430 854306b82d2faf0d5ef5b548b08fb2e5 314 SMART SM00987 156 308 8.0E-43 T 28-03-2018 AL504_RS12430 854306b82d2faf0d5ef5b548b08fb2e5 314 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 142 308 5.3E-63 T 28-03-2018 IPR005273 Uracil-DNA glycosylase family 4 AL504_RS12430 854306b82d2faf0d5ef5b548b08fb2e5 314 SMART SM00986 156 308 8.0E-43 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS12430 854306b82d2faf0d5ef5b548b08fb2e5 314 Gene3D G3DSA:3.40.470.10 118 313 4.8E-64 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS12430 854306b82d2faf0d5ef5b548b08fb2e5 314 Pfam PF03167 Uracil DNA glycosylase superfamily 156 308 1.4E-46 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 Pfam PF02347 Glycine cleavage system P-protein 14 435 4.8E-178 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 Pfam PF02347 Glycine cleavage system P-protein 448 733 1.7E-13 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 5 956 25.364 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 14 950 0.0 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 Gene3D G3DSA:3.90.1150.10 772 904 2.5E-46 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 SUPERFAMILY SSF53383 479 886 3.38E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 SUPERFAMILY SSF53383 929 951 3.38E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 Gene3D G3DSA:3.40.640.10 92 336 1.1E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 Gene3D G3DSA:3.90.1150.10 337 439 1.3E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 SUPERFAMILY SSF53383 14 437 3.2E-104 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS23010 df97acc491de2cc6c89df05ad9d7477c 957 Gene3D G3DSA:3.40.640.10 523 771 9.9E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 28-03-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 3.8E-46 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 3.8E-46 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 3.8E-46 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 3.8E-46 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 3.8E-46 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 SUPERFAMILY SSF53182 1 214 6.67E-71 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 Gene3D G3DSA:3.40.630.20 1 215 3.3E-62 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 39.909 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 PIRSF PIRSF015592 1 213 4.1E-81 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 215 6.3E-86 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 28-03-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site AL504_RS02945 44a5a7568ea10426de19e211ca69739d 215 Pfam PF01470 Pyroglutamyl peptidase 3 201 4.5E-78 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 SMART SM00965 52 103 1.0E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 Pfam PF07715 TonB-dependent Receptor Plug Domain 144 246 8.7E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 SUPERFAMILY SSF56935 104 794 8.9E-115 T 28-03-2018 AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 146 793 8.5E-103 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 Pfam PF07660 Secretin and TonB N terminus short domain 57 102 2.4E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 Gene3D G3DSA:2.170.130.10 103 253 3.0E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 Pfam PF00593 TonB dependent receptor 338 794 8.3E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24795 08ac4a92584243150f5c56c0b98a993f 797 Gene3D G3DSA:2.40.170.20 255 794 4.2E-72 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS17030 60f5aa5f2c00a9c3c6f64775c561f563 259 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 19 259 3.1E-112 T 28-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AL504_RS17030 60f5aa5f2c00a9c3c6f64775c561f563 259 Gene3D G3DSA:3.40.50.300 17 255 1.0E-58 T 28-03-2018 AL504_RS17030 60f5aa5f2c00a9c3c6f64775c561f563 259 SMART SM00382 44 236 0.0059 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17030 60f5aa5f2c00a9c3c6f64775c561f563 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 258 3.0E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS17030 60f5aa5f2c00a9c3c6f64775c561f563 259 Pfam PF00005 ABC transporter 36 189 1.0E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17030 60f5aa5f2c00a9c3c6f64775c561f563 259 SUPERFAMILY SSF52540 19 257 4.71E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00995 8a2fccac0b76f8f4da0f28b2619ef6bb 337 SMART SM00382 43 250 8.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS00995 8a2fccac0b76f8f4da0f28b2619ef6bb 337 Pfam PF00005 ABC transporter 35 192 2.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS00995 8a2fccac0b76f8f4da0f28b2619ef6bb 337 SUPERFAMILY SSF52540 8 272 5.94E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00995 8a2fccac0b76f8f4da0f28b2619ef6bb 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 326 2.8E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS00995 8a2fccac0b76f8f4da0f28b2619ef6bb 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 7.8E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS00995 8a2fccac0b76f8f4da0f28b2619ef6bb 337 Gene3D G3DSA:3.40.50.300 11 336 2.6E-75 T 28-03-2018 AL504_RS00995 8a2fccac0b76f8f4da0f28b2619ef6bb 337 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 2.8E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 2.8E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.8E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 2.8E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.8E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 Pfam PF00106 short chain dehydrogenase 3 182 2.1E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 SUPERFAMILY SSF51735 2 241 4.53E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 3.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 3.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 3.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 Gene3D G3DSA:3.40.50.720 2 264 1.7E-56 T 28-03-2018 AL504_RS01275 b18f8aa7a1a450f6290e68dd720c4e44 271 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 178 0.0062 T 28-03-2018 AL504_RS17655 287a60a6c1c6fd75aa9878f47a66f632 347 Gene3D G3DSA:1.10.3470.10 19 347 4.7E-54 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS17655 287a60a6c1c6fd75aa9878f47a66f632 347 SUPERFAMILY SSF81345 20 344 2.88E-61 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS17655 287a60a6c1c6fd75aa9878f47a66f632 347 Pfam PF01032 FecCD transport family 37 343 1.2E-69 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS20885 4021356afaf6a801e344c3adc90e8937 235 Gene3D G3DSA:2.60.120.10 7 144 7.1E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS20885 4021356afaf6a801e344c3adc90e8937 235 SMART SM00100 13 134 0.0045 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS20885 4021356afaf6a801e344c3adc90e8937 235 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 1.9E-11 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS20885 4021356afaf6a801e344c3adc90e8937 235 SUPERFAMILY SSF51206 12 140 4.98E-22 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS20885 4021356afaf6a801e344c3adc90e8937 235 SUPERFAMILY SSF46785 149 222 2.59E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20885 4021356afaf6a801e344c3adc90e8937 235 Pfam PF13545 Crp-like helix-turn-helix domain 151 220 3.1E-10 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS20885 4021356afaf6a801e344c3adc90e8937 235 Gene3D G3DSA:1.10.10.10 145 223 1.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 PIRSF PIRSF000137 1 540 7.1E-150 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 SUPERFAMILY SSF51905 472 534 8.78E-93 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 SUPERFAMILY SSF51905 3 288 8.78E-93 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 SUPERFAMILY SSF54373 290 473 1.67E-57 T 28-03-2018 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 Gene3D G3DSA:3.30.560.10 104 488 2.2E-102 T 28-03-2018 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 Pfam PF00732 GMC oxidoreductase 4 295 4.2E-85 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 Gene3D G3DSA:4.10.450.10 35 103 9.3E-29 T 28-03-2018 AL504_RS00450 f01ea3bacc8e8aabb733718b793969d7 547 Pfam PF05199 GMC oxidoreductase 387 525 1.9E-39 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 1.1E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.1E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 25 40 1.1E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 SMART SM00450 127 222 7.0E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 SUPERFAMILY SSF46785 18 157 4.71E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 SUPERFAMILY SSF52821 123 225 6.02E-31 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 Gene3D G3DSA:3.40.250.10 106 228 1.2E-28 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 ProSitePatterns PS00380 Rhodanese signature 1. 151 162 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 Pfam PF12840 Helix-turn-helix domain 23 80 5.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 Gene3D G3DSA:1.10.10.10 8 105 8.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 Pfam PF00581 Rhodanese-like domain 130 219 7.2E-14 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS24370 278e22b533558672454d7f5b66cd97ee 228 SMART SM00418 23 101 2.0E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 Gene3D G3DSA:1.10.10.10 1 56 1.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 SMART SM00344 5 114 1.6E-36 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 SUPERFAMILY SSF54909 65 152 5.77E-16 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 2.4E-17 T 28-03-2018 AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 Gene3D G3DSA:3.30.70.920 58 146 1.3E-19 T 28-03-2018 AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 SUPERFAMILY SSF46785 5 95 5.46E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 3.7E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 3.7E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 3.7E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS29995 250dae61afc92e260546d8d911a534e4 163 Pfam PF01037 Lrp/AsnC ligand binding domain 71 131 1.2E-14 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS28555 6c8948b2f4892c205252387147453f9e 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 323 9.2E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS28555 6c8948b2f4892c205252387147453f9e 325 SUPERFAMILY SSF161098 109 306 8.67E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS28555 6c8948b2f4892c205252387147453f9e 325 Gene3D G3DSA:1.10.3720.10 3 312 1.3E-27 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Gene3D G3DSA:3.40.50.980 586 741 1.5E-29 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 SUPERFAMILY SSF56801 433 953 8.5E-124 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Gene3D G3DSA:2.30.38.10 745 825 1.1E-17 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Pfam PF00668 Condensation domain 29 323 2.8E-15 T 28-03-2018 IPR001242 Condensation domain AL504_RS03215 8e627c466da4640e77070191c174e308 1046 ProSitePatterns PS00455 Putative AMP-binding domain signature. 579 590 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Pfam PF13193 AMP-binding enzyme C-terminal domain 840 917 3.9E-9 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03215 8e627c466da4640e77070191c174e308 1046 SUPERFAMILY SSF52777 17 179 2.59E-12 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Gene3D G3DSA:3.40.50.980 434 585 6.2E-39 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 465 856 2.1E-108 T 28-03-2018 IPR010071 Amino acid adenylation domain AL504_RS03215 8e627c466da4640e77070191c174e308 1046 SUPERFAMILY SSF52777 184 417 6.78E-16 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Gene3D G3DSA:3.30.300.30 827 949 1.2E-28 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Pfam PF00501 AMP-binding enzyme 443 832 1.5E-78 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 SMART SM00823 Phosphopantetheine attachment site 942 1011 5.9E-10 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Pfam PF00550 Phosphopantetheine attachment site 945 1007 1.4E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03215 8e627c466da4640e77070191c174e308 1046 SUPERFAMILY SSF47336 937 1007 3.01E-18 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS03215 8e627c466da4640e77070191c174e308 1046 ProSitePatterns PS00012 Phosphopantetheine attachment site. 966 981 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Gene3D G3DSA:3.30.559.10 10 196 2.1E-7 T 28-03-2018 AL504_RS03215 8e627c466da4640e77070191c174e308 1046 Gene3D G3DSA:1.10.1200.10 950 1018 4.9E-21 T 28-03-2018 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 407 2.0E-78 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 Gene3D G3DSA:1.20.1250.20 5 190 3.6E-32 T 28-03-2018 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 SUPERFAMILY SSF103473 243 448 1.14E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 SUPERFAMILY SSF103473 3 193 1.14E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 1.5E-9 T 28-03-2018 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.5E-9 T 28-03-2018 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 1.5E-9 T 28-03-2018 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 1.5E-9 T 28-03-2018 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 Gene3D G3DSA:1.20.1250.20 252 452 6.6E-24 T 28-03-2018 AL504_RS09040 4156ddeff34ba1cd204f5d822e05476f 462 Pfam PF07690 Major Facilitator Superfamily 15 404 2.2E-52 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS04550 27ad1d8dffe78cc2565e8ac8aa78a020 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 189 2.4E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS04550 27ad1d8dffe78cc2565e8ac8aa78a020 204 SUPERFAMILY SSF47616 78 202 2.05E-23 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS04550 27ad1d8dffe78cc2565e8ac8aa78a020 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 71 8.5E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS04550 27ad1d8dffe78cc2565e8ac8aa78a020 204 Gene3D G3DSA:3.40.30.10 1 95 4.8E-27 T 28-03-2018 AL504_RS04550 27ad1d8dffe78cc2565e8ac8aa78a020 204 SUPERFAMILY SSF52833 1 80 3.43E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS04550 27ad1d8dffe78cc2565e8ac8aa78a020 204 Gene3D G3DSA:1.20.1050.10 96 202 1.1E-21 T 28-03-2018 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 SUPERFAMILY SSF46689 200 248 2.42E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 Pfam PF12852 Cupin 2 185 3.9E-31 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 Pfam PF12833 Helix-turn-helix domain 223 302 8.7E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 SUPERFAMILY SSF46689 253 303 5.82E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 Gene3D G3DSA:2.60.120.280 14 186 2.7E-14 T 28-03-2018 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 Gene3D G3DSA:1.10.10.60 257 309 4.5E-15 T 28-03-2018 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 Gene3D G3DSA:1.10.10.60 198 256 5.5E-12 T 28-03-2018 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 SMART SM00342 217 300 5.9E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 SUPERFAMILY SSF51215 41 85 3.53E-6 T 28-03-2018 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 284 2.5E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS04460 a4abe511b8654d3c5621ec15d7571a53 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 300 2.5E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 Gene3D G3DSA:2.40.170.20 246 787 2.8E-84 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 Gene3D G3DSA:2.170.130.10 94 244 2.5E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 770 787 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 139 787 1.3E-110 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 SUPERFAMILY SSF56935 96 787 1.51E-127 T 28-03-2018 AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 237 2.1E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 SMART SM00965 47 98 6.7E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS18910 10c6ec8b851d1571495faadbf33cfb2d 787 Pfam PF00593 TonB dependent receptor 321 786 4.4E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS26500 f0a4efe973dcbf2978ded5b4b5aef590 258 SMART SM00382 36 230 4.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26500 f0a4efe973dcbf2978ded5b4b5aef590 258 Gene3D G3DSA:3.40.50.300 7 253 6.5E-62 T 28-03-2018 AL504_RS26500 f0a4efe973dcbf2978ded5b4b5aef590 258 Pfam PF00005 ABC transporter 28 182 5.7E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26500 f0a4efe973dcbf2978ded5b4b5aef590 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS26500 f0a4efe973dcbf2978ded5b4b5aef590 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 1.6E-121 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL504_RS26500 f0a4efe973dcbf2978ded5b4b5aef590 258 SUPERFAMILY SSF52540 11 244 5.44E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21085 33a802ef237ba609017758f3a201e70b 290 Gene3D G3DSA:3.40.50.300 2 167 5.5E-10 T 28-03-2018 AL504_RS21085 33a802ef237ba609017758f3a201e70b 290 SUPERFAMILY SSF52540 3 160 7.68E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21085 33a802ef237ba609017758f3a201e70b 290 Pfam PF03668 P-loop ATPase protein family 3 283 1.2E-84 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AL504_RS21085 33a802ef237ba609017758f3a201e70b 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 286 38.56 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AL504_RS21085 33a802ef237ba609017758f3a201e70b 290 PIRSF PIRSF005052 2 289 1.4E-110 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 211 530 2.8E-143 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 SUPERFAMILY SSF52402 195 417 3.09E-56 T 28-03-2018 AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 Gene3D G3DSA:3.30.300.10 399 530 1.9E-51 T 28-03-2018 AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 Pfam PF02540 NAD synthase 221 289 2.0E-8 T 28-03-2018 IPR022310 NAD/GMP synthase AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 530 54.598 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 Pfam PF00958 GMP synthase C terminal domain 444 529 1.8E-41 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 SUPERFAMILY SSF54810 403 530 5.36E-47 T 28-03-2018 AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 Gene3D G3DSA:3.40.50.880 1 220 1.8E-50 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 SUPERFAMILY SSF52317 1 235 1.2E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 Gene3D G3DSA:3.40.50.620 221 398 3.4E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 Pfam PF00117 Glutamine amidotransferase class-I 7 196 1.6E-35 T 28-03-2018 IPR017926 Glutamine amidotransferase AL504_RS01135 f133a0f5132a37b028dd14bb87414d4c 530 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 202 1.1E-69 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL504_RS04490 19c0232f34c6bffa01652374acbbb39e 401 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 297 303 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AL504_RS04490 19c0232f34c6bffa01652374acbbb39e 401 Pfam PF01070 FMN-dependent dehydrogenase 35 398 2.2E-125 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AL504_RS04490 19c0232f34c6bffa01652374acbbb39e 401 PIRSF PIRSF000138 8 401 2.2E-127 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AL504_RS04490 19c0232f34c6bffa01652374acbbb39e 401 SUPERFAMILY SSF51395 248 397 8.55E-90 T 28-03-2018 AL504_RS04490 19c0232f34c6bffa01652374acbbb39e 401 SUPERFAMILY SSF51395 25 215 8.55E-90 T 28-03-2018 AL504_RS04490 19c0232f34c6bffa01652374acbbb39e 401 Gene3D G3DSA:3.20.20.70 24 400 2.8E-90 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS29360 8a5e600e142b17db34ee451e8aded8fd 233 Gene3D G3DSA:1.10.287.510 77 173 0.0059 T 28-03-2018 AL504_RS29360 8a5e600e142b17db34ee451e8aded8fd 233 Gene3D G3DSA:1.10.287.510 3 76 0.0062 T 28-03-2018 AL504_RS19425 83f37a2cb276ff53b31238414edbe1a4 528 SUPERFAMILY SSF53850 31 510 1.81E-133 T 28-03-2018 AL504_RS19425 83f37a2cb276ff53b31238414edbe1a4 528 PIRSF PIRSF002741 22 526 8.1E-109 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS19425 83f37a2cb276ff53b31238414edbe1a4 528 Gene3D G3DSA:3.40.190.10 181 302 3.7E-38 T 28-03-2018 AL504_RS19425 83f37a2cb276ff53b31238414edbe1a4 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 438 1.4E-98 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS19425 83f37a2cb276ff53b31238414edbe1a4 528 Gene3D G3DSA:3.10.105.10 303 499 2.0E-50 T 28-03-2018 AL504_RS19425 83f37a2cb276ff53b31238414edbe1a4 528 Gene3D G3DSA:3.90.76.10 38 180 3.6E-37 T 28-03-2018 AL504_RS10260 4a3515e45751ebbb89b8b7d8e28d2179 715 Gene3D G3DSA:3.40.1350.10 284 396 4.3E-5 T 28-03-2018 AL504_RS10260 4a3515e45751ebbb89b8b7d8e28d2179 715 SUPERFAMILY SSF103642 694 714 3.43E-7 T 28-03-2018 AL504_RS10260 4a3515e45751ebbb89b8b7d8e28d2179 715 Gene3D G3DSA:3.10.450.50 542 715 2.5E-12 T 28-03-2018 AL504_RS10260 4a3515e45751ebbb89b8b7d8e28d2179 715 Pfam PF02810 SEC-C motif 697 714 1.6E-9 T 28-03-2018 IPR004027 SEC-C motif AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 Gene3D G3DSA:3.40.50.300 2 281 1.0E-47 T 28-03-2018 AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 SMART SM00382 351 518 8.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 SMART SM00382 26 228 3.0E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 Pfam PF12848 ABC transporter 221 303 1.1E-24 T 28-03-2018 IPR032781 ABC-transporter extension domain AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 SUPERFAMILY SSF52540 123 255 8.32E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 SUPERFAMILY SSF52540 2 92 8.32E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 SUPERFAMILY SSF52540 303 525 1.19E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 Pfam PF00005 ABC transporter 18 182 1.5E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 Pfam PF00005 ABC transporter 343 473 6.9E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04455 7128d4e843a3225334d6d7bd9ab09383 544 Gene3D G3DSA:3.40.50.300 282 538 4.0E-44 T 28-03-2018 AL504_RS05915 75f18149eac6cf9254cd34d869ee2377 142 Gene3D G3DSA:3.10.180.10 1 138 9.2E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS05915 75f18149eac6cf9254cd34d869ee2377 142 SUPERFAMILY SSF54593 1 136 5.45E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS05915 75f18149eac6cf9254cd34d869ee2377 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 124 8.0E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PIRSF PIRSF000724 1 397 9.2E-135 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 394 39.576 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 370 387 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 2.3E-80 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 Gene3D G3DSA:3.40.50.1260 6 180 7.9E-55 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 Gene3D G3DSA:3.40.50.1260 181 382 3.2E-79 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 SUPERFAMILY SSF53748 15 394 2.47E-140 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25775 6f669f02732a16e45b3a083d3a4ce7ea 397 Pfam PF00162 Phosphoglycerate kinase 16 384 1.6E-138 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS09540 3ef4c5837eb82232efd845a7d20f333d 167 Gene3D G3DSA:1.10.530.40 2 166 8.5E-40 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 AL504_RS09540 3ef4c5837eb82232efd845a7d20f333d 167 Pfam PF00959 Phage lysozyme 43 153 1.1E-8 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AL504_RS09540 3ef4c5837eb82232efd845a7d20f333d 167 SUPERFAMILY SSF53955 11 165 2.61E-44 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS01230 233b61974cea881d379d2cac4c9385a0 148 SMART SM00347 29 144 2.7E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS01230 233b61974cea881d379d2cac4c9385a0 148 Gene3D G3DSA:1.10.10.10 11 142 2.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01230 233b61974cea881d379d2cac4c9385a0 148 Pfam PF01047 MarR family 38 93 3.5E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS01230 233b61974cea881d379d2cac4c9385a0 148 SUPERFAMILY SSF46785 13 140 1.04E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01230 233b61974cea881d379d2cac4c9385a0 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS05865 10ec1a7e3c3d74dcc4224317e3e2965d 135 SUPERFAMILY SSF69118 16 132 1.57E-34 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS05865 10ec1a7e3c3d74dcc4224317e3e2965d 135 Gene3D G3DSA:1.20.1290.10 47 129 8.7E-25 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS05865 10ec1a7e3c3d74dcc4224317e3e2965d 135 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 64 110 2.3E-16 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS05865 10ec1a7e3c3d74dcc4224317e3e2965d 135 Gene3D G3DSA:1.20.5.810 16 46 5.2E-14 T 28-03-2018 AL504_RS05865 10ec1a7e3c3d74dcc4224317e3e2965d 135 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 126 4.9E-22 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS06530 860a60e2239431c91bb80409f7740cd4 126 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS06530 860a60e2239431c91bb80409f7740cd4 126 SUPERFAMILY SSF52172 4 121 7.68E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS06530 860a60e2239431c91bb80409f7740cd4 126 Gene3D G3DSA:3.40.50.2300 2 125 4.2E-37 T 28-03-2018 AL504_RS06530 860a60e2239431c91bb80409f7740cd4 126 SMART SM00448 3 116 2.4E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00940 db95d30ad37feb3d0d56f1e28196b111 282 Gene3D G3DSA:3.40.50.150 28 259 7.4E-7 T 28-03-2018 AL504_RS00940 db95d30ad37feb3d0d56f1e28196b111 282 Pfam PF13679 Methyltransferase domain 35 179 2.6E-44 T 28-03-2018 IPR025714 Methyltransferase domain AL504_RS00940 db95d30ad37feb3d0d56f1e28196b111 282 SUPERFAMILY SSF53335 42 177 9.35E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS09780 8d9ce75426064dd166ef3b1e5a3ab5c2 255 SUPERFAMILY SSF52980 82 245 2.95E-26 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS09780 8d9ce75426064dd166ef3b1e5a3ab5c2 255 Pfam PF09588 YqaJ-like viral recombinase domain 12 198 1.5E-12 T 28-03-2018 IPR019080 YqaJ viral recombinase AL504_RS09780 8d9ce75426064dd166ef3b1e5a3ab5c2 255 Gene3D G3DSA:3.90.320.10 1 255 1.6E-37 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL504_RS09780 8d9ce75426064dd166ef3b1e5a3ab5c2 255 SUPERFAMILY SSF52980 3 44 1.34E-5 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 493 2.2E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 113 1.1E-16 T 28-03-2018 IPR000014 PAS domain AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 SUPERFAMILY SSF55785 20 114 1.43E-28 T 28-03-2018 IPR000014 PAS domain AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 SMART SM00086 80 121 0.0013 T 28-03-2018 IPR001610 PAC motif AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 SMART SM00091 8 74 9.6E-4 T 28-03-2018 IPR000014 PAS domain AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 Gene3D G3DSA:1.10.287.950 225 334 3.8E-13 T 28-03-2018 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 Gene3D G3DSA:1.10.287.950 335 530 8.5E-46 T 28-03-2018 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 Gene3D G3DSA:3.40.50.10600 7 132 1.2E-28 T 28-03-2018 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 SMART SM00304 226 278 1.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 Pfam PF00672 HAMP domain 226 274 1.2E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 Pfam PF08447 PAS fold 30 113 6.9E-17 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 SMART SM00283 279 526 1.7E-80 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 SUPERFAMILY SSF58104 246 527 2.09E-70 T 28-03-2018 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 3.9E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 3.9E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 3.9E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06380 d97b144daf3d750a160b3f2eaa7740f0 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 454 483 3.9E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS27955 e3459d141f34f1261f8b1c79d85e2a63 365 Pfam PF09375 Imelysin 46 341 3.6E-35 T 28-03-2018 IPR018976 Peptidase M75, Imelysin AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 Gene3D G3DSA:3.30.70.20 47 106 1.5E-7 T 28-03-2018 AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.7E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 Gene3D G3DSA:3.30.70.20 1 17 0.08 T 28-03-2018 AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 2.0E-16 T 28-03-2018 IPR022569 Ferredoxin, C-terminal AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 SUPERFAMILY SSF54862 3 105 2.51E-23 T 28-03-2018 AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.7E-15 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.7E-15 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.7E-15 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AL504_RS12285 28e06da0c726d62198017e08e178f5bd 107 Gene3D G3DSA:3.30.70.20 18 46 2.3E-10 T 28-03-2018 AL504_RS07275 f5b266845f85f470d716845b64769346 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 3.1E-20 T 28-03-2018 AL504_RS07275 f5b266845f85f470d716845b64769346 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS07275 f5b266845f85f470d716845b64769346 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 4.8E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS07275 f5b266845f85f470d716845b64769346 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 4.8E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS07275 f5b266845f85f470d716845b64769346 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 4.8E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS07275 f5b266845f85f470d716845b64769346 160 Gene3D G3DSA:3.30.70.920 59 143 5.1E-26 T 28-03-2018 AL504_RS07275 f5b266845f85f470d716845b64769346 160 SMART SM00344 6 115 6.6E-47 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS07275 f5b266845f85f470d716845b64769346 160 SUPERFAMILY SSF54909 66 155 9.39E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS07275 f5b266845f85f470d716845b64769346 160 SUPERFAMILY SSF46785 5 65 1.04E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07275 f5b266845f85f470d716845b64769346 160 Gene3D G3DSA:1.10.10.10 1 56 2.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07275 f5b266845f85f470d716845b64769346 160 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 1.1E-22 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS07715 f40b09ad1ecb8ba6bdd4731001824edf 318 Gene3D G3DSA:3.40.50.10730 5 167 6.6E-4 T 28-03-2018 AL504_RS07715 f40b09ad1ecb8ba6bdd4731001824edf 318 Pfam PF01548 Transposase 8 140 5.5E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL504_RS07715 f40b09ad1ecb8ba6bdd4731001824edf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 273 2.8E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL504_RS20900 f40b09ad1ecb8ba6bdd4731001824edf 318 Gene3D G3DSA:3.40.50.10730 5 167 6.6E-4 T 28-03-2018 AL504_RS20900 f40b09ad1ecb8ba6bdd4731001824edf 318 Pfam PF01548 Transposase 8 140 5.5E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL504_RS20900 f40b09ad1ecb8ba6bdd4731001824edf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 273 2.8E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL504_RS13975 f40b09ad1ecb8ba6bdd4731001824edf 318 Gene3D G3DSA:3.40.50.10730 5 167 6.6E-4 T 28-03-2018 AL504_RS13975 f40b09ad1ecb8ba6bdd4731001824edf 318 Pfam PF01548 Transposase 8 140 5.5E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL504_RS13975 f40b09ad1ecb8ba6bdd4731001824edf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 273 2.8E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 SUPERFAMILY SSF53795 249 616 1.63E-154 T 28-03-2018 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 249 615 5.4E-166 T 28-03-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 14 617 51.017 T 28-03-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 Gene3D G3DSA:3.90.228.20 249 323 1.2E-22 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 Gene3D G3DSA:3.90.228.20 330 618 6.0E-118 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 273 281 - T 28-03-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 Gene3D G3DSA:3.40.449.10 9 248 6.8E-113 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 PIRSF PIRSF001348 7 618 6.9E-278 T 28-03-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 25 245 1.3E-102 T 28-03-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL504_RS07725 3df91087b4456c5d5876e813acae593b 618 SUPERFAMILY SSF68923 12 248 1.36E-100 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 Gene3D G3DSA:1.20.120.530 76 217 2.6E-33 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 Gene3D G3DSA:1.10.10.10 1 75 5.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 Pfam PF07729 FCD domain 83 204 1.2E-29 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 SMART SM00345 15 73 4.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 SUPERFAMILY SSF46785 9 77 4.26E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 SUPERFAMILY SSF48008 79 212 8.37E-29 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 2.8E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS27470 754ca4e58cd4d26184cd04cc518dfb19 218 SMART SM00895 83 205 6.1E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 SMART SM00937 63 178 2.0E-64 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.689 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 Gene3D G3DSA:1.20.58.410 2 95 1.1E-16 T 28-03-2018 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 SUPERFAMILY SSF75620 12 353 3.53E-136 T 28-03-2018 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 Pfam PF03462 PCRF domain 15 203 2.1E-71 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 2.6E-160 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 Pfam PF00472 RF-1 domain 214 321 5.0E-43 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL504_RS21640 2776ac65a49c87e79fcc91df797273a2 360 Gene3D G3DSA:3.30.160.20 209 293 2.2E-32 T 28-03-2018 AL504_RS03510 d7c5ba082b01ae0818f099e79aa1779c 708 Pfam PF00149 Calcineurin-like phosphoesterase 79 307 1.1E-7 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS03510 d7c5ba082b01ae0818f099e79aa1779c 708 SUPERFAMILY SSF56300 77 320 1.48E-23 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS03510 d7c5ba082b01ae0818f099e79aa1779c 708 Gene3D G3DSA:3.60.21.10 72 360 3.5E-21 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS03510 d7c5ba082b01ae0818f099e79aa1779c 708 SUPERFAMILY SSF49899 442 700 5.81E-19 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AL504_RS03510 d7c5ba082b01ae0818f099e79aa1779c 708 Gene3D G3DSA:2.60.120.200 427 705 1.8E-22 T 28-03-2018 AL504_RS03510 d7c5ba082b01ae0818f099e79aa1779c 708 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 536 699 2.4E-14 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Gene3D G3DSA:3.30.1300.30 1576 1678 2.1E-20 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Gene3D G3DSA:2.150.10.10 611 835 0.0019 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Gene3D G3DSA:2.150.10.10 165 353 1.4E-26 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Gene3D G3DSA:2.150.10.10 532 610 5.4E-6 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF03895 YadA-like membrane anchor domain 1620 1678 1.1E-12 T 28-03-2018 IPR005594 YadA-like, C-terminal AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 SUPERFAMILY SSF54523 1566 1678 1.73E-20 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 SUPERFAMILY SSF101967 1470 1573 1.07E-20 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Gene3D G3DSA:2.150.10.10 1350 1443 2.6E-6 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Gene3D G3DSA:2.150.10.10 354 525 2.4E-10 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1322 1358 0.021 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1415 1453 6.2E-4 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 321 354 3.5E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1109 1149 0.0052 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 581 618 5.0E-5 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 803 837 3.1E-8 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1555 1573 4.4E-5 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 500 528 3.0E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 SUPERFAMILY SSF101967 553 604 2.35E-5 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 SUPERFAMILY SSF101967 177 347 1.23E-21 T 28-03-2018 AL504_RS28955 d94fc19826cd7f3d4530c15186b27985 1678 Gene3D G3DSA:2.150.10.10 1451 1575 2.6E-25 T 28-03-2018 AL504_RS22700 db441cb3e73edc5c264fb4103705db9d 363 Gene3D G3DSA:3.40.1610.10 3 224 5.1E-46 T 28-03-2018 IPR027479 Protein of unknown function DUF917, N-terminal AL504_RS22700 db441cb3e73edc5c264fb4103705db9d 363 Gene3D G3DSA:2.40.390.10 225 342 9.3E-21 T 28-03-2018 IPR024071 Protein of unknown function DUF917, C-terminal AL504_RS22700 db441cb3e73edc5c264fb4103705db9d 363 SUPERFAMILY SSF160991 3 356 5.1E-79 T 28-03-2018 AL504_RS22700 db441cb3e73edc5c264fb4103705db9d 363 Pfam PF06032 Protein of unknown function (DUF917) 8 330 8.4E-57 T 28-03-2018 IPR010318 Protein of unknown function DUF917 AL504_RS04990 5c88d40f79f8fa28bfc70414b60edbdc 240 Gene3D G3DSA:3.40.50.300 1 239 1.0E-52 T 28-03-2018 AL504_RS04990 5c88d40f79f8fa28bfc70414b60edbdc 240 Pfam PF00005 ABC transporter 20 163 2.0E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04990 5c88d40f79f8fa28bfc70414b60edbdc 240 SUPERFAMILY SSF52540 3 236 1.08E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04990 5c88d40f79f8fa28bfc70414b60edbdc 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 235 1.8E-10 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS04990 5c88d40f79f8fa28bfc70414b60edbdc 240 SMART SM00382 28 212 1.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04155 989d3674ccedce0d64a1ce1354d2cd39 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 362 2.3E-66 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL504_RS04155 989d3674ccedce0d64a1ce1354d2cd39 401 Gene3D G3DSA:1.20.1250.20 204 395 1.3E-7 T 28-03-2018 AL504_RS04155 989d3674ccedce0d64a1ce1354d2cd39 401 Pfam PF07690 Major Facilitator Superfamily 20 359 1.8E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS04155 989d3674ccedce0d64a1ce1354d2cd39 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 84 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS04155 989d3674ccedce0d64a1ce1354d2cd39 401 SUPERFAMILY SSF103473 5 391 2.35E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS04155 989d3674ccedce0d64a1ce1354d2cd39 401 Gene3D G3DSA:1.20.1250.20 3 199 5.5E-25 T 28-03-2018 AL504_RS26930 c95e1dd950b73ab3b3a8e4a0badf88ce 285 Gene3D G3DSA:1.10.3720.10 25 283 7.6E-34 T 28-03-2018 AL504_RS26930 c95e1dd950b73ab3b3a8e4a0badf88ce 285 SUPERFAMILY SSF161098 89 272 3.79E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26930 c95e1dd950b73ab3b3a8e4a0badf88ce 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 280 3.7E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05305 2925c3f47b38c33f528dc5ef1d57aaf9 787 Gene3D G3DSA:2.170.130.10 98 255 6.4E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS05305 2925c3f47b38c33f528dc5ef1d57aaf9 787 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 145 787 4.4E-101 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS05305 2925c3f47b38c33f528dc5ef1d57aaf9 787 Pfam PF00593 TonB dependent receptor 358 785 1.5E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS05305 2925c3f47b38c33f528dc5ef1d57aaf9 787 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 242 2.5E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS05305 2925c3f47b38c33f528dc5ef1d57aaf9 787 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 770 787 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS05305 2925c3f47b38c33f528dc5ef1d57aaf9 787 Gene3D G3DSA:2.40.170.20 256 787 2.7E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS05305 2925c3f47b38c33f528dc5ef1d57aaf9 787 SUPERFAMILY SSF56935 103 787 5.16E-98 T 28-03-2018 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 SUPERFAMILY SSF52540 6 288 2.74E-105 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 SUPERFAMILY SSF50447 271 407 7.07E-36 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Gene3D G3DSA:3.30.230.10 499 614 1.5E-44 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Gene3D G3DSA:3.30.70.870 405 498 1.2E-38 T 28-03-2018 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 SMART SM00838 606 694 2.5E-56 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 9.8E-65 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Pfam PF14492 Elongation Factor G, domain II 409 483 2.2E-34 T 28-03-2018 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 SMART SM00889 485 604 2.9E-75 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 2.9E-19 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Pfam PF00679 Elongation factor G C-terminus 606 693 1.1E-31 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Gene3D G3DSA:3.40.50.300 1 293 1.5E-55 T 28-03-2018 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Gene3D G3DSA:2.40.30.10 295 404 3.8E-30 T 28-03-2018 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 SUPERFAMILY SSF54980 609 696 8.99E-30 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 SUPERFAMILY SSF54211 484 605 4.55E-45 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 SUPERFAMILY SSF54980 409 486 2.99E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 110.339 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Pfam PF03764 Elongation factor G, domain IV 484 604 3.6E-49 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 8.7E-31 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS19685 ffb9cba40ffafe1aa9899bc39849ffab 700 Gene3D G3DSA:3.30.70.240 615 693 1.0E-32 T 28-03-2018 AL504_RS16060 8f85a9fa6cfbd1dcf2664d7c462e032b 234 SUPERFAMILY SSF52540 2 231 7.77E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16060 8f85a9fa6cfbd1dcf2664d7c462e032b 234 SMART SM00382 26 211 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16060 8f85a9fa6cfbd1dcf2664d7c462e032b 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS16060 8f85a9fa6cfbd1dcf2664d7c462e032b 234 Gene3D G3DSA:3.40.50.300 1 230 1.6E-52 T 28-03-2018 AL504_RS16060 8f85a9fa6cfbd1dcf2664d7c462e032b 234 Pfam PF00005 ABC transporter 19 162 3.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 SUPERFAMILY SSF55347 137 302 2.22E-53 T 28-03-2018 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 PIRSF PIRSF000098 1 433 3.7E-164 T 28-03-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 SUPERFAMILY SSF55021 353 422 1.3E-14 T 28-03-2018 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 Gene3D G3DSA:3.40.50.720 1 157 3.4E-33 T 28-03-2018 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 Pfam PF01842 ACT domain 354 419 2.5E-15 T 28-03-2018 IPR002912 ACT domain AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.3E-20 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 Gene3D G3DSA:3.30.360.10 158 298 6.2E-54 T 28-03-2018 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 Gene3D G3DSA:3.30.70.260 350 429 8.5E-19 T 28-03-2018 AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 SUPERFAMILY SSF51735 1 158 1.34E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS10575 2d0895ba4fd80039973c43174610ce27 434 Pfam PF00742 Homoserine dehydrogenase 137 315 1.6E-65 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 803 945 1.9E-50 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 10 48 1.0E-17 T 28-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 Gene3D G3DSA:3.40.50.970 600 809 3.9E-56 T 28-03-2018 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 SUPERFAMILY SSF52518 126 551 5.5E-89 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 Gene3D G3DSA:3.40.50.970 173 532 1.7E-87 T 28-03-2018 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 Gene3D G3DSA:1.10.287.1150 89 172 7.1E-24 T 28-03-2018 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 Pfam PF02779 Transketolase, pyrimidine binding domain 601 798 1.3E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 SMART SM00861 601 798 5.7E-57 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 13 944 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 SUPERFAMILY SSF52518 585 804 1.18E-45 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 PIRSF PIRSF000157 1 947 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL504_RS11690 b3b796e691ad26dc2ecd27ef049006b7 955 Pfam PF00676 Dehydrogenase E1 component 221 525 1.9E-49 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 SMART SM00965 43 93 2.0E-13 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 792 809 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 SUPERFAMILY SSF56935 97 809 3.66E-111 T 28-03-2018 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 Gene3D G3DSA:2.40.170.20 238 809 2.9E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 Pfam PF07660 Secretin and TonB N terminus short domain 44 92 6.2E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 Pfam PF00593 TonB dependent receptor 349 806 5.3E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 230 2.4E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 Gene3D G3DSA:2.170.130.10 90 237 5.3E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS26305 aacd7b55e9e8c8bf658de170611bd82a 809 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 132 809 1.5E-99 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS03160 991b39497261bc6e9ab556f9c85ba4f3 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 212 9.2E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03160 991b39497261bc6e9ab556f9c85ba4f3 217 SUPERFAMILY SSF161098 11 206 4.06E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03160 991b39497261bc6e9ab556f9c85ba4f3 217 Gene3D G3DSA:1.10.3720.10 2 217 8.1E-44 T 28-03-2018 AL504_RS03160 991b39497261bc6e9ab556f9c85ba4f3 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 108 5.4E-28 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS03590 4f67a05f349915f7b3b6c27ba343909b 371 SMART SM00062 67 296 7.4E-36 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS03590 4f67a05f349915f7b3b6c27ba343909b 371 Gene3D G3DSA:3.40.190.10 57 170 8.5E-16 T 28-03-2018 AL504_RS03590 4f67a05f349915f7b3b6c27ba343909b 371 SUPERFAMILY SSF53850 58 283 1.12E-40 T 28-03-2018 AL504_RS03590 4f67a05f349915f7b3b6c27ba343909b 371 Gene3D G3DSA:3.40.190.10 171 252 9.4E-16 T 28-03-2018 AL504_RS03590 4f67a05f349915f7b3b6c27ba343909b 371 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 69 277 6.3E-27 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS01935 9aac5e203acf5a190da1c9382d1854c3 612 Pfam PF05947 Type VI secretion system, TssF 5 609 9.3E-211 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AL504_RS01935 9aac5e203acf5a190da1c9382d1854c3 612 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 611 7.0E-218 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AL504_RS01935 9aac5e203acf5a190da1c9382d1854c3 612 PIRSF PIRSF028304 1 611 3.0E-193 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AL504_RS15955 54ddd81231918b68d422f541284bbac4 246 Pfam PF01464 Transglycosylase SLT domain 119 222 6.5E-28 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL504_RS15955 54ddd81231918b68d422f541284bbac4 246 SUPERFAMILY SSF53955 113 245 2.32E-42 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS15955 54ddd81231918b68d422f541284bbac4 246 Gene3D G3DSA:1.10.530.10 95 246 3.4E-45 T 28-03-2018 AL504_RS08300 f636255b0c61403043cc58fe6807bdeb 131 SUPERFAMILY SSF54593 4 122 1.1E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS08300 f636255b0c61403043cc58fe6807bdeb 131 Gene3D G3DSA:3.10.180.10 2 129 1.3E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS08300 f636255b0c61403043cc58fe6807bdeb 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 1.1E-8 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS18060 2bba2901460aaa5db6d46e03b3e46148 258 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 10 257 1.9E-52 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL504_RS18060 2bba2901460aaa5db6d46e03b3e46148 258 Gene3D G3DSA:3.40.1390.30 2 111 3.4E-22 T 28-03-2018 AL504_RS18060 2bba2901460aaa5db6d46e03b3e46148 258 SUPERFAMILY SSF102705 8 257 1.7E-70 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL504_RS18060 2bba2901460aaa5db6d46e03b3e46148 258 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 10 245 1.3E-49 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL504_RS18060 2bba2901460aaa5db6d46e03b3e46148 258 Gene3D G3DSA:3.40.1390.30 112 229 9.1E-31 T 28-03-2018 AL504_RS23605 390de339492e6676140d59564958d80e 595 Gene3D G3DSA:3.40.50.1220 213 380 1.1E-19 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS23605 390de339492e6676140d59564958d80e 595 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 217 299 3.1E-10 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS23605 390de339492e6676140d59564958d80e 595 Gene3D G3DSA:3.40.50.970 381 594 6.7E-26 T 28-03-2018 AL504_RS23605 390de339492e6676140d59564958d80e 595 SUPERFAMILY SSF52518 421 584 1.54E-27 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS23605 390de339492e6676140d59564958d80e 595 SUPERFAMILY SSF52518 18 206 5.05E-34 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS23605 390de339492e6676140d59564958d80e 595 SUPERFAMILY SSF52467 177 368 2.77E-14 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS23605 390de339492e6676140d59564958d80e 595 Gene3D G3DSA:3.40.50.970 18 204 1.2E-29 T 28-03-2018 AL504_RS23605 390de339492e6676140d59564958d80e 595 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 193 1.3E-34 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS23605 390de339492e6676140d59564958d80e 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 429 576 3.6E-20 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 Pfam PF12833 Helix-turn-helix domain 298 376 9.7E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 SUPERFAMILY SSF46689 329 377 2.91E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 359 375 3.2E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 344 359 3.2E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 Gene3D G3DSA:1.10.10.60 330 379 4.1E-14 T 28-03-2018 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 SUPERFAMILY SSF46689 275 323 4.57E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 Gene3D G3DSA:1.10.10.60 271 329 5.4E-9 T 28-03-2018 AL504_RS00910 8cc5af43ade2632eade99ca0b8944652 382 SMART SM00342 292 375 1.7E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS08545 df265697ce6c466798d3a6d64926d726 237 Gene3D G3DSA:1.20.58.280 57 98 0.016 T 28-03-2018 AL504_RS08545 df265697ce6c466798d3a6d64926d726 237 Gene3D G3DSA:1.25.40.10 165 230 0.0039 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS08545 df265697ce6c466798d3a6d64926d726 237 Pfam PF14559 Tetratricopeptide repeat 81 136 1.5E-5 T 28-03-2018 AL504_RS08545 df265697ce6c466798d3a6d64926d726 237 Gene3D G3DSA:1.25.40.10 99 164 2.3E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS08545 df265697ce6c466798d3a6d64926d726 237 SUPERFAMILY SSF48452 69 139 6.92E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS08545 df265697ce6c466798d3a6d64926d726 237 SUPERFAMILY SSF48452 166 215 6.92E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS17160 c84b0faa7aa27e6af6ed77b42160f6c6 214 SUPERFAMILY SSF52833 10 200 2.13E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS17160 c84b0faa7aa27e6af6ed77b42160f6c6 214 Gene3D G3DSA:3.40.30.10 5 205 6.4E-47 T 28-03-2018 AL504_RS17160 c84b0faa7aa27e6af6ed77b42160f6c6 214 PIRSF PIRSF006386 6 212 5.1E-59 T 28-03-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590 AL504_RS17160 c84b0faa7aa27e6af6ed77b42160f6c6 214 Pfam PF01323 DSBA-like thioredoxin domain 11 196 4.7E-39 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 SUPERFAMILY SSF46894 135 209 1.87E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 Gene3D G3DSA:3.40.50.2300 2 127 4.1E-31 T 28-03-2018 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 Gene3D G3DSA:1.10.10.10 128 212 1.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.1E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 SMART SM00421 147 204 4.9E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 SUPERFAMILY SSF52172 1 133 1.71E-30 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 8.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 8.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 8.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 Pfam PF00072 Response regulator receiver domain 6 116 1.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS29410 83fb5e10aa5b83f833e6f5fa69fdd57b 212 SMART SM00448 3 116 8.8E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS17630 b1147ea24563d81f15521dc45e296247 258 Gene3D G3DSA:3.40.50.150 8 255 1.6E-25 T 28-03-2018 AL504_RS17630 b1147ea24563d81f15521dc45e296247 258 SUPERFAMILY SSF53335 27 232 1.48E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS17630 b1147ea24563d81f15521dc45e296247 258 Pfam PF01564 Spermine/spermidine synthase domain 55 201 5.7E-13 T 28-03-2018 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 96 1.4E-18 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 Gene3D G3DSA:3.40.140.10 1 121 8.7E-31 T 28-03-2018 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 PIRSF PIRSF006769 1 357 6.1E-115 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 143 353 6.3E-53 T 28-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 Pfam PF01872 RibD C-terminal domain 144 346 2.4E-43 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 348 4.3E-105 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 Gene3D G3DSA:3.40.430.10 122 357 1.5E-66 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 SUPERFAMILY SSF53597 142 351 5.07E-54 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 SUPERFAMILY SSF53927 1 141 1.51E-44 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL504_RS15535 1e632d2ca1cab0ecbeb1b8fba28ef69f 373 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 85 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 SUPERFAMILY SSF54826 1 112 6.3E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 Gene3D G3DSA:3.30.390.10 1 97 5.0E-29 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 Gene3D G3DSA:3.20.20.120 98 353 3.0E-76 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 7.7E-26 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 SUPERFAMILY SSF51604 95 359 3.01E-79 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 Pfam PF13378 Enolase C-terminal domain-like 130 355 9.8E-62 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS22335 7057a7b279a6c6f9af73cec69343343d 382 SMART SM00922 125 230 2.5E-22 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 Gene3D G3DSA:3.30.565.10 228 456 8.6E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 SMART SM00387 350 457 1.8E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 455 5.4E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 SUPERFAMILY SSF55874 314 454 7.2E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 2.2E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 2.2E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.2E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS25370 69504eff564a5a85557aa87f9772fd0a 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.2E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04250 396963a363a86beb7cd327d95a437cfc 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 154 1.3E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS04250 396963a363a86beb7cd327d95a437cfc 697 SUPERFAMILY SSF56935 11 697 2.38E-133 T 28-03-2018 AL504_RS04250 396963a363a86beb7cd327d95a437cfc 697 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 680 697 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS04250 396963a363a86beb7cd327d95a437cfc 697 Pfam PF00593 TonB dependent receptor 244 696 1.1E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS04250 396963a363a86beb7cd327d95a437cfc 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 697 2.5E-88 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS04250 396963a363a86beb7cd327d95a437cfc 697 Gene3D G3DSA:2.170.130.10 14 166 3.4E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS04250 396963a363a86beb7cd327d95a437cfc 697 Gene3D G3DSA:2.40.170.20 168 697 2.0E-77 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS10915 5184a4abafbbe0b994944fd38ed1e41a 88 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 20 60 4.0E-13 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS10915 5184a4abafbbe0b994944fd38ed1e41a 88 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 19 79 15.062 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS10915 5184a4abafbbe0b994944fd38ed1e41a 88 Gene3D G3DSA:1.10.287.1040 17 80 2.3E-25 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS10915 5184a4abafbbe0b994944fd38ed1e41a 88 PIRSF PIRSF006488 5 88 5.5E-24 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS10915 5184a4abafbbe0b994944fd38ed1e41a 88 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 19 73 1.5E-22 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS10915 5184a4abafbbe0b994944fd38ed1e41a 88 SUPERFAMILY SSF116842 17 80 7.98E-20 T 28-03-2018 AL504_RS10915 5184a4abafbbe0b994944fd38ed1e41a 88 Pfam PF02609 Exonuclease VII small subunit 20 70 1.3E-20 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS29870 6475ed9692c2b962f1bcf6ec684b88b1 610 Pfam PF00005 ABC transporter 409 544 3.5E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29870 6475ed9692c2b962f1bcf6ec684b88b1 610 Gene3D G3DSA:3.40.50.300 378 591 2.4E-33 T 28-03-2018 AL504_RS29870 6475ed9692c2b962f1bcf6ec684b88b1 610 Gene3D G3DSA:1.20.1560.10 34 377 1.7E-30 T 28-03-2018 AL504_RS29870 6475ed9692c2b962f1bcf6ec684b88b1 610 Pfam PF06472 ABC transporter transmembrane region 2 38 325 3.6E-75 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS29870 6475ed9692c2b962f1bcf6ec684b88b1 610 SMART SM00382 418 590 7.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29870 6475ed9692c2b962f1bcf6ec684b88b1 610 SUPERFAMILY SSF52540 386 587 1.13E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29870 6475ed9692c2b962f1bcf6ec684b88b1 610 SUPERFAMILY SSF90123 42 373 1.44E-14 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS12455 656ad38ba49d7837befb02309685bfef 172 Gene3D G3DSA:1.20.1290.10 2 171 3.3E-31 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS12455 656ad38ba49d7837befb02309685bfef 172 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 109 157 1.0E-10 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS12455 656ad38ba49d7837befb02309685bfef 172 Pfam PF02627 Carboxymuconolactone decarboxylase family 95 167 1.8E-12 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS12455 656ad38ba49d7837befb02309685bfef 172 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 172 71.093 T 28-03-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS12455 656ad38ba49d7837befb02309685bfef 172 SUPERFAMILY SSF69118 4 169 2.28E-39 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS27265 694c60bbfbfa93a5676a5f6cb27ea6c5 251 SMART SM00382 37 232 5.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS27265 694c60bbfbfa93a5676a5f6cb27ea6c5 251 PIRSF PIRSF039085 4 251 3.8E-96 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS27265 694c60bbfbfa93a5676a5f6cb27ea6c5 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS27265 694c60bbfbfa93a5676a5f6cb27ea6c5 251 Pfam PF00005 ABC transporter 30 176 3.7E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS27265 694c60bbfbfa93a5676a5f6cb27ea6c5 251 Gene3D G3DSA:3.40.50.300 3 250 2.5E-72 T 28-03-2018 AL504_RS27265 694c60bbfbfa93a5676a5f6cb27ea6c5 251 SUPERFAMILY SSF52540 7 246 2.48E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04495 5167027c749598f1cb8f936159d33245 387 Gene3D G3DSA:3.60.21.10 157 380 1.6E-27 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS04495 5167027c749598f1cb8f936159d33245 387 SUPERFAMILY SSF56300 160 384 4.68E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS04495 5167027c749598f1cb8f936159d33245 387 Pfam PF00149 Calcineurin-like phosphoesterase 160 328 2.5E-11 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 4.0E-35 T 28-03-2018 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 SUPERFAMILY SSF55021 1 76 6.87E-23 T 28-03-2018 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 Gene3D G3DSA:3.30.70.260 1 87 8.6E-26 T 28-03-2018 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 Pfam PF13710 ACT domain 12 73 9.0E-16 T 28-03-2018 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 SUPERFAMILY SSF55021 79 162 2.44E-25 T 28-03-2018 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 Gene3D G3DSA:3.30.70.1150 88 159 1.8E-26 T 28-03-2018 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 9.1E-27 T 28-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL504_RS13140 44a17b818b242fdccb4821132acd715f 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 2.7E-64 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 ProSitePatterns PS00163 Fumarate lyases signature. 297 306 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 Gene3D G3DSA:1.10.40.30 394 448 8.1E-30 T 28-03-2018 AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 PRINTS PR00149 Fumarate lyase superfamily signature 120 138 3.2E-14 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 PRINTS PR00149 Fumarate lyase superfamily signature 297 313 3.2E-14 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 PRINTS PR00149 Fumarate lyase superfamily signature 166 184 3.2E-14 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 SUPERFAMILY SSF48557 7 450 5.65E-98 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 Gene3D G3DSA:1.10.275.10 4 120 5.0E-40 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 Pfam PF08328 Adenylosuccinate lyase C-terminal 334 448 2.1E-48 T 28-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 16 454 2.9E-119 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 Gene3D G3DSA:1.20.200.10 121 393 4.5E-77 T 28-03-2018 AL504_RS10465 85dfc814936f2a9462fb12550a33e581 458 Pfam PF00206 Lyase 18 315 3.3E-55 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL504_RS15020 33bfc6cf62d4bd78bd042621991558f2 264 SMART SM00382 32 219 2.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15020 33bfc6cf62d4bd78bd042621991558f2 264 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS15020 33bfc6cf62d4bd78bd042621991558f2 264 SUPERFAMILY SSF52540 6 231 2.55E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15020 33bfc6cf62d4bd78bd042621991558f2 264 Pfam PF00005 ABC transporter 31 168 4.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS15020 33bfc6cf62d4bd78bd042621991558f2 264 Gene3D G3DSA:3.40.50.300 3 246 4.5E-53 T 28-03-2018 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 PIRSF PIRSF036687 1 861 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.1E-95 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 ProSitePatterns PS01244 Aconitase family signature 2. 763 776 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 Gene3D G3DSA:3.30.499.10 686 863 2.3E-49 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 SUPERFAMILY SSF74778 1 160 3.14E-66 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 856 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 Pfam PF00330 Aconitase family (aconitate hydratase) 474 816 2.9E-39 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 Pfam PF11791 Aconitate B N-terminal domain 5 156 2.0E-64 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 Gene3D G3DSA:3.40.1060.10 524 685 5.8E-27 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 Gene3D G3DSA:3.30.499.10 405 523 2.1E-10 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 SUPERFAMILY SSF53732 380 855 1.14E-144 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 SUPERFAMILY SSF52016 162 372 4.19E-65 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS26610 66234346ab8639c8a5de1832158c6192 863 Gene3D G3DSA:3.20.19.10 162 363 1.5E-29 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS13970 12705d72ea725c16f1945245670cf2bb 319 Pfam PF03466 LysR substrate binding domain 91 314 2.4E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS13970 12705d72ea725c16f1945245670cf2bb 319 SUPERFAMILY SSF53850 92 316 6.33E-28 T 28-03-2018 AL504_RS13970 12705d72ea725c16f1945245670cf2bb 319 Gene3D G3DSA:1.10.10.10 1 88 6.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13970 12705d72ea725c16f1945245670cf2bb 319 Gene3D G3DSA:3.40.190.10 201 287 6.1E-16 T 28-03-2018 AL504_RS13970 12705d72ea725c16f1945245670cf2bb 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS13970 12705d72ea725c16f1945245670cf2bb 319 SUPERFAMILY SSF46785 6 116 3.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13970 12705d72ea725c16f1945245670cf2bb 319 Gene3D G3DSA:3.40.190.10 92 200 7.5E-7 T 28-03-2018 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 Gene3D G3DSA:3.30.870.10 38 262 2.9E-34 T 28-03-2018 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 SUPERFAMILY SSF56024 248 442 2.47E-46 T 28-03-2018 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 Gene3D G3DSA:3.30.870.10 293 442 1.3E-31 T 28-03-2018 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 SMART SM00155 176 203 0.03 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 SMART SM00155 372 399 1.2E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 Pfam PF13091 PLD-like domain 300 426 3.4E-28 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 Pfam PF13091 PLD-like domain 91 201 8.2E-14 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS10220 dc0548ad8aec3a442dc176384496625c 459 SUPERFAMILY SSF56024 63 288 2.64E-47 T 28-03-2018 AL504_RS23245 defbac0c20c2d59d0e4aca14df31e9d3 317 Gene3D G3DSA:3.60.15.10 11 240 9.4E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS23245 defbac0c20c2d59d0e4aca14df31e9d3 317 SUPERFAMILY SSF56281 15 309 1.68E-57 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS23245 defbac0c20c2d59d0e4aca14df31e9d3 317 SMART SM00849 33 220 6.7E-14 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS23245 defbac0c20c2d59d0e4aca14df31e9d3 317 Pfam PF00753 Metallo-beta-lactamase superfamily 33 219 2.1E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS20805 e7aecee839150711678be8b86b5391c7 404 Gene3D G3DSA:1.20.1530.10 11 396 2.0E-152 T 28-03-2018 IPR023171 Na/H antiporter domain AL504_RS20805 e7aecee839150711678be8b86b5391c7 404 Pfam PF06965 Na+/H+ antiporter 1 15 391 1.0E-148 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL504_RS20805 e7aecee839150711678be8b86b5391c7 404 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 16 391 2.3E-142 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL504_RS20805 e7aecee839150711678be8b86b5391c7 404 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 13 403 23.706 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL504_RS26120 1bf59f3bec7bcf455b7f55013e63995b 386 Gene3D G3DSA:3.40.50.2300 23 200 2.5E-37 T 28-03-2018 AL504_RS26120 1bf59f3bec7bcf455b7f55013e63995b 386 Pfam PF13458 Periplasmic binding protein 27 364 1.5E-71 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS26120 1bf59f3bec7bcf455b7f55013e63995b 386 Gene3D G3DSA:3.40.50.2300 201 355 9.4E-17 T 28-03-2018 AL504_RS26120 1bf59f3bec7bcf455b7f55013e63995b 386 SUPERFAMILY SSF53822 27 379 6.73E-86 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS27215 c5d0687408a75f4c2f6d3fc30c38cde3 53 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 5.6E-17 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL504_RS27215 c5d0687408a75f4c2f6d3fc30c38cde3 53 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 5.4E-13 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL504_RS20650 8c723509f52a317f163c990b8ee153cc 212 Pfam PF00694 Aconitase C-terminal domain 6 120 4.5E-29 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20650 8c723509f52a317f163c990b8ee153cc 212 Gene3D G3DSA:3.20.19.10 1 173 6.6E-37 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS20650 8c723509f52a317f163c990b8ee153cc 212 SUPERFAMILY SSF52016 3 176 1.12E-48 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS20650 8c723509f52a317f163c990b8ee153cc 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 181 1.5E-52 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL504_RS03240 08ba77a896923adcb17a6587330d0bdb 694 Gene3D G3DSA:2.170.130.10 14 167 1.3E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03240 08ba77a896923adcb17a6587330d0bdb 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 159 1.9E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03240 08ba77a896923adcb17a6587330d0bdb 694 SUPERFAMILY SSF56935 13 694 2.98E-137 T 28-03-2018 AL504_RS03240 08ba77a896923adcb17a6587330d0bdb 694 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 693 7.0E-126 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS03240 08ba77a896923adcb17a6587330d0bdb 694 Pfam PF00593 TonB dependent receptor 233 693 8.9E-58 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03240 08ba77a896923adcb17a6587330d0bdb 694 Gene3D G3DSA:2.40.170.20 173 694 5.3E-82 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS09945 4e1b94c2672bb3aa88c66415724428b3 90 Gene3D G3DSA:1.10.3880.10 2 89 1.7E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL504_RS09945 4e1b94c2672bb3aa88c66415724428b3 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.7E-42 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL504_RS09945 4e1b94c2672bb3aa88c66415724428b3 90 SUPERFAMILY SSF111148 1 89 1.07E-38 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL504_RS09945 4e1b94c2672bb3aa88c66415724428b3 90 PIRSF PIRSF029827 1 90 3.8E-42 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL504_RS09945 4e1b94c2672bb3aa88c66415724428b3 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 29.123 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL504_RS09945 4e1b94c2672bb3aa88c66415724428b3 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-37 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 SUPERFAMILY SSF46946 2 114 2.94E-42 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.567 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.0E-50 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 Gene3D G3DSA:1.10.8.50 1 66 5.5E-21 T 28-03-2018 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.6E-30 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 Gene3D G3DSA:4.10.910.10 67 85 3.2E-16 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 Gene3D G3DSA:4.10.910.10 86 121 5.7E-24 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS20015 30ceb387c49b4e74599c0bd4e382695e 121 PIRSF PIRSF002134 1 121 3.4E-39 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS30180 bf40bbee3d524311a01ef3df119f6edc 403 Hamap MF_00677 UPF0261 protein . 5 403 50.359 T 28-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL504_RS30180 bf40bbee3d524311a01ef3df119f6edc 403 Pfam PF06792 Uncharacterised protein family (UPF0261) 7 400 6.4E-158 T 28-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL504_RS30180 bf40bbee3d524311a01ef3df119f6edc 403 PIRSF PIRSF033271 4 403 3.2E-181 T 28-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL504_RS30180 bf40bbee3d524311a01ef3df119f6edc 403 Gene3D G3DSA:3.40.50.1820 8 366 9.6E-5 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 Gene3D G3DSA:2.40.30.10 232 324 6.5E-24 T 28-03-2018 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 PRINTS PR00315 GTP-binding elongation factor signature 18 31 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 PRINTS PR00315 GTP-binding elongation factor signature 155 164 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 PRINTS PR00315 GTP-binding elongation factor signature 78 86 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 PRINTS PR00315 GTP-binding elongation factor signature 98 108 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 PRINTS PR00315 GTP-binding elongation factor signature 114 125 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 Gene3D G3DSA:2.40.30.10 326 431 5.9E-23 T 28-03-2018 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 17 431 1.5E-162 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 Gene3D G3DSA:3.40.50.300 14 229 2.0E-37 T 28-03-2018 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 SUPERFAMILY SSF50465 327 431 1.39E-27 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 Pfam PF03144 Elongation factor Tu domain 2 260 319 3.5E-7 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 SUPERFAMILY SSF50447 234 323 1.46E-22 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 SUPERFAMILY SSF52540 17 247 6.18E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 71 86 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS11280 8b37ea7387ca04d1543f26eec74eab34 432 Pfam PF00009 Elongation factor Tu GTP binding domain 17 209 1.9E-37 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 SUPERFAMILY SSF56059 102 323 8.31E-62 T 28-03-2018 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 SMART SM01210 332 424 3.8E-51 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Gene3D G3DSA:3.90.600.10 332 425 1.5E-32 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 SUPERFAMILY SSF52440 1 101 4.46E-35 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 SMART SM01209 101 298 1.3E-134 T 28-03-2018 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 3.5E-36 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 41.662 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Gene3D G3DSA:3.30.470.20 189 331 1.3E-57 T 28-03-2018 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 298 1.5E-75 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 3.7E-167 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Gene3D G3DSA:3.40.50.20 2 84 2.3E-37 T 28-03-2018 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 SUPERFAMILY SSF51246 331 424 1.46E-29 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 333 422 2.9E-28 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL504_RS09440 424d8d0c110ba512d6db6c7420a620d2 435 Gene3D G3DSA:3.30.1490.20 85 187 1.6E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 216 1.0E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 SUPERFAMILY SSF56935 72 760 4.45E-127 T 28-03-2018 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 Pfam PF00593 TonB dependent receptor 317 758 2.7E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 116 757 3.3E-117 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 Gene3D G3DSA:2.170.130.10 71 223 4.1E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 Gene3D G3DSA:2.40.170.20 225 760 1.6E-80 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 Pfam PF07660 Secretin and TonB N terminus short domain 19 68 1.7E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS18780 b4edb119e74a242922574511783abb1e 760 SMART SM00965 19 69 3.0E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 SMART SM00382 240 366 5.5E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 SUPERFAMILY SSF160246 4 66 1.33E-7 T 28-03-2018 AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 SUPERFAMILY SSF52540 91 472 3.39E-104 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 5 472 2.1E-213 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 Gene3D G3DSA:3.40.50.300 213 475 8.9E-66 T 28-03-2018 AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 Pfam PF00437 Type II/IV secretion system protein 117 379 1.3E-86 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 Gene3D G3DSA:3.30.450.90 75 212 2.0E-47 T 28-03-2018 AL504_RS06855 b7b8891b28af50b7ed6faa34ad21c60e 475 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 307 321 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 Gene3D G3DSA:3.40.50.10090 7 56 9.9E-10 T 28-03-2018 AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 SUPERFAMILY SSF51735 10 257 2.84E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 199 5.6E-5 T 28-03-2018 AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 Gene3D G3DSA:3.40.50.720 57 259 4.9E-61 T 28-03-2018 AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 8.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 8.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 8.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 8.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 8.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 255 4.5E-62 T 28-03-2018 AL504_RS10630 56ae8411f094d57c1aa787f2ad4d776b 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Gene3D G3DSA:3.40.1190.10 111 350 4.3E-54 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 SUPERFAMILY SSF53623 111 342 2.22E-69 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Gene3D G3DSA:3.90.190.20 807 950 1.2E-42 T 28-03-2018 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 488 938 31.594 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Pfam PF01225 Mur ligase family, catalytic domain 515 562 1.8E-5 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Pfam PF01225 Mur ligase family, catalytic domain 30 108 2.4E-10 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 SUPERFAMILY SSF63418 513 587 3.27E-19 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 SUPERFAMILY SSF53244 346 510 1.45E-41 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 SUPERFAMILY SSF53623 592 806 4.58E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Gene3D G3DSA:3.40.1390.10 516 581 2.4E-21 T 28-03-2018 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Gene3D G3DSA:3.40.1390.10 10 110 3.1E-17 T 28-03-2018 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Pfam PF02875 Mur ligase family, glutamate ligase domain 348 443 3.6E-18 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Pfam PF02875 Mur ligase family, glutamate ligase domain 807 891 1.5E-15 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 510 32.263 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 SUPERFAMILY SSF53244 807 937 5.13E-36 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Pfam PF08245 Mur ligase middle domain 597 786 6.9E-41 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Pfam PF08245 Mur ligase middle domain 120 325 8.0E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Gene3D G3DSA:3.90.190.20 362 515 2.6E-45 T 28-03-2018 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 510 7.7E-141 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 SUPERFAMILY SSF63418 29 109 2.35E-17 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 520 937 2.6E-125 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14775 8748e94a061a0aad99349ce9753fe907 954 Gene3D G3DSA:3.40.1190.10 582 803 7.6E-54 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 171 331 8.7E-48 T 28-03-2018 IPR000160 GGDEF domain AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 Pfam PF00072 Response regulator receiver domain 20 132 2.4E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 SMART SM00267 159 335 4.4E-55 T 28-03-2018 IPR000160 GGDEF domain AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 333 2.0E-51 T 28-03-2018 IPR000160 GGDEF domain AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 Gene3D G3DSA:3.30.70.270 163 335 5.9E-52 T 28-03-2018 AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 SUPERFAMILY SSF55073 175 333 3.84E-49 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 SUPERFAMILY SSF52172 15 150 5.27E-29 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 SMART SM00448 18 132 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS01560 7d06fb77447912834aab7ab67320807c 337 Gene3D G3DSA:3.40.50.2300 7 162 3.1E-27 T 28-03-2018 AL504_RS29040 0978496366f514f32ad772578016d2c8 705 SUPERFAMILY SSF51445 136 581 4.73E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29040 0978496366f514f32ad772578016d2c8 705 SUPERFAMILY SSF51445 613 695 4.73E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29040 0978496366f514f32ad772578016d2c8 705 Pfam PF02446 4-alpha-glucanotransferase 173 679 5.2E-100 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL504_RS29040 0978496366f514f32ad772578016d2c8 705 Gene3D G3DSA:3.20.20.80 148 703 7.2E-143 T 28-03-2018 AL504_RS29040 0978496366f514f32ad772578016d2c8 705 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 119 685 1.3E-84 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL504_RS02005 ed291b6132a179b413505062c087bd15 218 Pfam PF00691 OmpA family 94 198 1.6E-20 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS02005 ed291b6132a179b413505062c087bd15 218 SUPERFAMILY SSF103088 69 203 1.14E-28 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS02005 ed291b6132a179b413505062c087bd15 218 Gene3D G3DSA:3.30.1330.60 42 216 2.2E-36 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS07115 269484e6563bb38d98295b2291e5847e 290 Gene3D G3DSA:1.10.3720.10 14 275 2.1E-40 T 28-03-2018 AL504_RS07115 269484e6563bb38d98295b2291e5847e 290 SUPERFAMILY SSF161098 80 271 1.44E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07115 269484e6563bb38d98295b2291e5847e 290 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 62 7.3E-11 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS07115 269484e6563bb38d98295b2291e5847e 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 286 7.5E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27145 ae41a1f171c2a8d7fbf54899f8c286fc 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 1.2E-16 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL504_RS27145 ae41a1f171c2a8d7fbf54899f8c286fc 190 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 186 5.0E-51 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL504_RS27145 ae41a1f171c2a8d7fbf54899f8c286fc 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL504_RS27145 ae41a1f171c2a8d7fbf54899f8c286fc 190 PIRSF PIRSF000847 1 190 4.0E-45 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 SUPERFAMILY SSF53633 19 303 8.8E-59 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 Pfam PF00583 Acetyltransferase (GNAT) family 346 423 9.3E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 SUPERFAMILY SSF55729 308 429 2.87E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 Pfam PF00696 Amino acid kinase family 39 271 1.0E-28 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 Gene3D G3DSA:3.40.630.30 307 452 6.2E-24 T 28-03-2018 AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 22 452 2.4E-176 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 PIRSF PIRSF000423 12 452 6.5E-183 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 Gene3D G3DSA:3.40.1160.10 20 305 3.4E-55 T 28-03-2018 AL504_RS09940 13b2201dd59b5e4c34027debac0cdd05 452 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 452 193.339 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL504_RS29400 01e736299d61622877640b68a7e78786 280 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 73 270 1.1E-71 T 28-03-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 AL504_RS29400 01e736299d61622877640b68a7e78786 280 Gene3D G3DSA:1.10.3720.10 7 280 9.7E-23 T 28-03-2018 AL504_RS29400 01e736299d61622877640b68a7e78786 280 SUPERFAMILY SSF161098 84 269 7.06E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29400 01e736299d61622877640b68a7e78786 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 276 6.5E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19755 01aea8d55fb2335b4989ab95ea879123 325 SUPERFAMILY SSF160246 33 148 2.48E-13 T 28-03-2018 AL504_RS19755 01aea8d55fb2335b4989ab95ea879123 325 SUPERFAMILY SSF52540 134 321 5.31E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19755 01aea8d55fb2335b4989ab95ea879123 325 Gene3D G3DSA:3.40.50.300 103 324 9.7E-26 T 28-03-2018 AL504_RS19755 01aea8d55fb2335b4989ab95ea879123 325 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 114 304 5.8E-34 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AL504_RS27445 a2c6e322406037f8e7a5aef26981c20b 181 Pfam PF00578 AhpC/TSA family 37 157 2.3E-14 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS27445 a2c6e322406037f8e7a5aef26981c20b 181 Gene3D G3DSA:3.40.30.10 24 178 1.6E-33 T 28-03-2018 AL504_RS27445 a2c6e322406037f8e7a5aef26981c20b 181 SUPERFAMILY SSF52833 37 176 2.13E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 PIRSF PIRSF000804 3 371 2.9E-109 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 Gene3D G3DSA:3.10.150.10 2 125 3.2E-23 T 28-03-2018 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 8 370 2.3E-91 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 Gene3D G3DSA:3.10.150.10 128 251 1.6E-31 T 28-03-2018 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 SUPERFAMILY SSF55979 8 120 1.8E-21 T 28-03-2018 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 134 247 3.1E-33 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 SUPERFAMILY SSF55979 130 248 7.07E-29 T 28-03-2018 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 SUPERFAMILY SSF55979 250 371 8.79E-33 T 28-03-2018 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 SMART SM00480 20 367 8.4E-104 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 Gene3D G3DSA:3.10.150.10 252 371 3.7E-23 T 28-03-2018 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 9 122 2.3E-26 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS19340 14ac1a329a138bcf563f92ebab14abe6 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 250 370 4.5E-30 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS07425 aa6309460d7bea4eaa1ef33653c899eb 699 Gene3D G3DSA:2.40.170.20 168 699 1.5E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS07425 aa6309460d7bea4eaa1ef33653c899eb 699 SUPERFAMILY SSF56935 29 699 6.64E-130 T 28-03-2018 AL504_RS07425 aa6309460d7bea4eaa1ef33653c899eb 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 155 1.3E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS07425 aa6309460d7bea4eaa1ef33653c899eb 699 Pfam PF00593 TonB dependent receptor 226 698 5.4E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS07425 aa6309460d7bea4eaa1ef33653c899eb 699 Gene3D G3DSA:2.170.130.10 24 166 1.5E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS07425 aa6309460d7bea4eaa1ef33653c899eb 699 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 682 699 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS07425 aa6309460d7bea4eaa1ef33653c899eb 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 699 3.8E-110 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS27690 e5629f9adaea5e6addcd183cf01200dc 539 SUPERFAMILY SSF50998 202 247 4.45E-13 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL504_RS27690 e5629f9adaea5e6addcd183cf01200dc 539 SUPERFAMILY SSF50998 13 118 4.45E-13 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL504_RS27690 e5629f9adaea5e6addcd183cf01200dc 539 SUPERFAMILY SSF50998 435 529 4.45E-13 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL504_RS27690 e5629f9adaea5e6addcd183cf01200dc 539 Gene3D G3DSA:2.130.10.10 8 311 8.3E-8 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS27690 e5629f9adaea5e6addcd183cf01200dc 539 Gene3D G3DSA:2.140.10.10 364 536 1.0E-12 T 28-03-2018 AL504_RS27690 e5629f9adaea5e6addcd183cf01200dc 539 Pfam PF13570 PQQ-like domain 443 481 0.0021 T 28-03-2018 IPR025666 Pyrrolo-quinoline quinone-like domain AL504_RS12570 61619dd8dfe7689f7b1b4ef7d93ee7f5 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 1.9E-39 T 28-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12570 61619dd8dfe7689f7b1b4ef7d93ee7f5 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.287 T 28-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AL504_RS00660 146b82bca9ba4c9ee636842e30718004 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS00660 146b82bca9ba4c9ee636842e30718004 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS00660 146b82bca9ba4c9ee636842e30718004 227 Gene3D G3DSA:1.10.357.10 21 212 9.3E-29 T 28-03-2018 AL504_RS00660 146b82bca9ba4c9ee636842e30718004 227 SUPERFAMILY SSF46689 14 93 2.05E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00660 146b82bca9ba4c9ee636842e30718004 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 70 1.7E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 SUPERFAMILY SSF48300 4 62 1.7E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 Gene3D G3DSA:1.20.5.710 3 55 6.8E-17 T 28-03-2018 AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 Gene3D G3DSA:3.30.1390.10 56 126 1.0E-30 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 9.8E-49 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 SUPERFAMILY SSF54736 55 126 3.31E-24 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 126 25.792 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 2.2E-19 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 97 3.0E-12 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19630 28b7ef0fd4d07c610ab0fae5c4d3af13 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 1.2E-30 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Gene3D G3DSA:1.20.120.160 4 143 1.3E-29 T 28-03-2018 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SUPERFAMILY SSF50341 470 602 3.53E-22 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Gene3D G3DSA:2.30.30.40 471 538 0.12 T 28-03-2018 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Gene3D G3DSA:2.30.30.40 539 602 1.4E-13 T 28-03-2018 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Pfam PF00072 Response regulator receiver domain 632 744 3.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SUPERFAMILY SSF47226 8 125 5.36E-24 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Gene3D G3DSA:3.30.565.10 180 470 1.0E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 470 1.2E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SMART SM00260 463 602 3.6E-7 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SUPERFAMILY SSF55874 287 469 2.36E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Pfam PF01584 CheW-like domain 477 604 1.5E-15 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SUPERFAMILY SSF52172 629 750 1.42E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Pfam PF01627 Hpt domain 11 102 3.9E-14 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 Gene3D G3DSA:3.40.50.2300 623 753 1.5E-33 T 28-03-2018 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SMART SM00387 328 471 1.4E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SMART SM00073 8 105 9.7E-14 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 8.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 8.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 8.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS01550 52074beda8426f10a5480973a9d07ebd 753 SMART SM00448 630 744 4.3E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 SMART SM00448 10 121 9.0E-47 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 2.7E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 Pfam PF00072 Response regulator receiver domain 12 122 1.9E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 SMART SM00862 162 238 1.7E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 SUPERFAMILY SSF46894 138 240 6.8E-28 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 Gene3D G3DSA:3.40.50.2300 1 135 3.4E-40 T 28-03-2018 AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 SUPERFAMILY SSF52172 6 131 1.24E-43 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS12440 1bcb95779f2db0800c4f79b2dc3764c5 244 Gene3D G3DSA:1.10.10.10 136 243 2.1E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27975 981871629f9f7a9086730e2481b9390e 180 Pfam PF07366 SnoaL-like polyketide cyclase 51 173 4.2E-35 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS27975 981871629f9f7a9086730e2481b9390e 180 SUPERFAMILY SSF54427 53 177 2.77E-30 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS27975 981871629f9f7a9086730e2481b9390e 180 Gene3D G3DSA:3.10.450.50 33 178 1.3E-24 T 28-03-2018 AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 Pfam PF01037 Lrp/AsnC ligand binding domain 68 136 2.2E-10 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.2E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.2E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.2E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 SUPERFAMILY SSF46785 1 57 3.62E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 Gene3D G3DSA:3.30.70.920 46 133 9.5E-18 T 28-03-2018 AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 SUPERFAMILY SSF54909 64 139 1.74E-12 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 SMART SM00344 1 107 3.1E-17 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 9.6E-13 T 28-03-2018 AL504_RS12750 b609e7c7c54041ff148cc5b7d0c926d6 141 Gene3D G3DSA:1.10.10.10 1 45 2.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03615 e44b86ecc17ea2acc035b9978146b4bc 328 Pfam PF16220 Domain of unknown function (DUF4880) 24 64 2.6E-8 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS03615 e44b86ecc17ea2acc035b9978146b4bc 328 PIRSF PIRSF018266 14 328 1.3E-82 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS03615 e44b86ecc17ea2acc035b9978146b4bc 328 Pfam PF04773 FecR protein 121 213 7.7E-22 T 28-03-2018 IPR006860 FecR protein AL504_RS22205 9df8f495d56546207ad7d316e6c4cdee 399 SUPERFAMILY SSF53822 27 395 4.28E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS22205 9df8f495d56546207ad7d316e6c4cdee 399 Gene3D G3DSA:3.40.50.2300 15 163 1.2E-20 T 28-03-2018 AL504_RS22205 9df8f495d56546207ad7d316e6c4cdee 399 Gene3D G3DSA:3.40.50.2300 164 306 1.1E-32 T 28-03-2018 AL504_RS22205 9df8f495d56546207ad7d316e6c4cdee 399 Pfam PF13458 Periplasmic binding protein 27 362 7.9E-83 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 SMART SM00965 59 110 4.6E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 798 815 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 Pfam PF07715 TonB-dependent Receptor Plug Domain 154 258 8.9E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 Pfam PF00593 TonB dependent receptor 372 814 5.9E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 Gene3D G3DSA:2.170.130.10 112 265 5.0E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 SUPERFAMILY SSF56935 111 815 1.53E-125 T 28-03-2018 AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 Gene3D G3DSA:2.40.170.20 266 815 1.5E-81 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24285 556eab7be9670bbeaded4d13585c9af4 815 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 156 815 6.9E-103 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS04935 62b62562763bcaede78cb457b7d0d4c2 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.3E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04935 62b62562763bcaede78cb457b7d0d4c2 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 1.5E-30 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS04935 62b62562763bcaede78cb457b7d0d4c2 218 SUPERFAMILY SSF161098 13 201 3.01E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04935 62b62562763bcaede78cb457b7d0d4c2 218 Gene3D G3DSA:1.10.3720.10 1 217 8.0E-42 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 PIRSF PIRSF006288 1 867 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 SUPERFAMILY SSF81301 37 154 3.52E-23 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 868 307.646 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Gene3D G3DSA:3.30.460.10 16 157 6.1E-25 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Gene3D G3DSA:1.10.3090.10 329 601 1.6E-37 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 SUPERFAMILY SSF55021 789 859 1.48E-10 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 SUPERFAMILY SSF81593 169 272 1.02E-7 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 SUPERFAMILY SSF109604 406 528 1.1E-15 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Gene3D G3DSA:3.30.70.260 670 753 2.9E-5 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Gene3D G3DSA:3.30.70.260 785 865 8.8E-14 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Pfam PF01909 Nucleotidyltransferase domain 50 116 5.8E-6 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 SMART SM00471 433 580 5.4E-7 T 28-03-2018 IPR003607 HD/PDEase domain AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 SUPERFAMILY SSF55021 672 729 5.83E-7 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Pfam PF01966 HD domain 438 538 1.6E-8 T 28-03-2018 IPR006674 HD domain AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Pfam PF01842 ACT domain 793 837 7.9E-7 T 28-03-2018 IPR002912 ACT domain AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 22 858 9.7E-227 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Gene3D G3DSA:1.20.120.330 158 305 7.0E-23 T 28-03-2018 AL504_RS06210 3debbaac1d3a98be1ddd14842a51d3c0 868 Pfam PF08335 GlnD PII-uridylyltransferase 162 300 3.4E-29 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL504_RS21090 37dd47dabf31249d09389069f17e3b7b 251 PIRSF PIRSF000005 11 227 1.0E-63 T 28-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL504_RS21090 37dd47dabf31249d09389069f17e3b7b 251 SUPERFAMILY SSF46626 134 225 2.81E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21090 37dd47dabf31249d09389069f17e3b7b 251 Gene3D G3DSA:1.10.760.10 128 225 2.0E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21090 37dd47dabf31249d09389069f17e3b7b 251 Gene3D G3DSA:1.10.760.10 17 121 4.8E-13 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21090 37dd47dabf31249d09389069f17e3b7b 251 Pfam PF00034 Cytochrome c 156 225 1.1E-5 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21090 37dd47dabf31249d09389069f17e3b7b 251 Pfam PF00034 Cytochrome c 53 103 9.1E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS21090 37dd47dabf31249d09389069f17e3b7b 251 SUPERFAMILY SSF46626 53 127 4.73E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS11220 d7988cad2438193282e627108b8bccd9 94 PIRSF PIRSF030200 1 94 1.8E-42 T 28-03-2018 IPR009359 Phenylacetic acid degradation B AL504_RS11220 d7988cad2438193282e627108b8bccd9 94 Pfam PF06243 Phenylacetic acid degradation B 4 90 1.1E-38 T 28-03-2018 IPR009359 Phenylacetic acid degradation B AL504_RS11220 d7988cad2438193282e627108b8bccd9 94 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 5 94 2.5E-42 T 28-03-2018 IPR009359 Phenylacetic acid degradation B AL504_RS15280 27ea77fae3fb7c0200b4336000f43df2 822 Gene3D G3DSA:1.20.1250.20 427 615 5.7E-18 T 28-03-2018 AL504_RS15280 27ea77fae3fb7c0200b4336000f43df2 822 Pfam PF07690 Major Facilitator Superfamily 430 755 6.2E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS15280 27ea77fae3fb7c0200b4336000f43df2 822 Gene3D G3DSA:1.20.1250.20 619 822 6.9E-19 T 28-03-2018 AL504_RS15280 27ea77fae3fb7c0200b4336000f43df2 822 SUPERFAMILY SSF103473 429 818 7.19E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17015 754fc5222e9a595b67239c6167762435 274 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 188 271 4.5E-30 T 28-03-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal AL504_RS17015 754fc5222e9a595b67239c6167762435 274 Pfam PF07728 AAA domain (dynein-related subfamily) 41 175 2.3E-33 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AL504_RS17015 754fc5222e9a595b67239c6167762435 274 Gene3D G3DSA:3.40.50.300 31 181 8.3E-27 T 28-03-2018 AL504_RS17015 754fc5222e9a595b67239c6167762435 274 SUPERFAMILY SSF52540 32 231 1.78E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13025 a8c4cab63bf020766268c2d4ceef8da7 164 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 1.2E-29 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL504_RS13025 a8c4cab63bf020766268c2d4ceef8da7 164 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 1.2E-29 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL504_RS13025 a8c4cab63bf020766268c2d4ceef8da7 164 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 1.2E-29 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL504_RS13025 a8c4cab63bf020766268c2d4ceef8da7 164 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 1.2E-29 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL504_RS13025 a8c4cab63bf020766268c2d4ceef8da7 164 Pfam PF03840 Preprotein translocase SecG subunit 7 76 1.4E-21 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL504_RS13025 a8c4cab63bf020766268c2d4ceef8da7 164 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 7 76 9.2E-25 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL504_RS20140 1fe24eb90a6d27bf542d6b7f8826690e 242 Gene3D G3DSA:3.40.50.150 26 242 3.0E-41 T 28-03-2018 AL504_RS20140 1fe24eb90a6d27bf542d6b7f8826690e 242 Pfam PF08241 Methyltransferase domain 47 141 6.8E-18 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL504_RS20140 1fe24eb90a6d27bf542d6b7f8826690e 242 SUPERFAMILY SSF53335 6 221 4.3E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS00110 5bf6dd332a39540abb709129b1fcb918 294 SUPERFAMILY SSF53850 90 289 1.69E-32 T 28-03-2018 AL504_RS00110 5bf6dd332a39540abb709129b1fcb918 294 Pfam PF03466 LysR substrate binding domain 90 286 1.7E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00110 5bf6dd332a39540abb709129b1fcb918 294 Gene3D G3DSA:3.40.190.10 176 266 1.6E-15 T 28-03-2018 AL504_RS00110 5bf6dd332a39540abb709129b1fcb918 294 Gene3D G3DSA:1.10.10.10 1 86 5.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00110 5bf6dd332a39540abb709129b1fcb918 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00110 5bf6dd332a39540abb709129b1fcb918 294 Gene3D G3DSA:3.40.190.10 91 175 2.1E-17 T 28-03-2018 AL504_RS00110 5bf6dd332a39540abb709129b1fcb918 294 SUPERFAMILY SSF46785 4 113 2.92E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Pfam PF02503 Polyphosphate kinase middle domain 125 323 3.4E-57 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 SUPERFAMILY SSF140356 9 112 4.84E-34 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Pfam PF13089 Polyphosphate kinase N-terminal domain 12 116 1.4E-34 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 PIRSF PIRSF015589 3 691 7.9E-263 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 11 687 1.6E-288 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 SUPERFAMILY SSF56024 511 687 1.35E-68 T 28-03-2018 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Gene3D G3DSA:3.30.870.10 510 691 8.4E-36 T 28-03-2018 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Gene3D G3DSA:1.20.58.310 13 115 1.2E-34 T 28-03-2018 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Hamap MF_00347 Polyphosphate kinase [ppk]. 9 691 28.342 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 SUPERFAMILY SSF143724 114 319 1.26E-61 T 28-03-2018 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Gene3D G3DSA:3.30.1840.10 116 311 2.3E-58 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Pfam PF13090 Polyphosphate kinase C-terminal domain 340 687 5.5E-154 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 SUPERFAMILY SSF56024 336 502 2.86E-55 T 28-03-2018 AL504_RS26480 6af0c9cbff95829102726a7ba158497a 691 Gene3D G3DSA:3.30.870.10 331 509 1.2E-20 T 28-03-2018 AL504_RS04505 4ae127c508b5584ea35610211f87173e 403 Gene3D G3DSA:1.20.1250.20 209 403 1.2E-23 T 28-03-2018 AL504_RS04505 4ae127c508b5584ea35610211f87173e 403 SUPERFAMILY SSF103473 8 395 3.79E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS04505 4ae127c508b5584ea35610211f87173e 403 Gene3D G3DSA:1.20.1250.20 17 203 7.4E-24 T 28-03-2018 AL504_RS04505 4ae127c508b5584ea35610211f87173e 403 Pfam PF07690 Major Facilitator Superfamily 25 312 3.0E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS24990 18b2429805c77de7a62f0e02f085a693 205 Pfam PF04891 NifQ 42 200 4.9E-39 T 28-03-2018 IPR006975 NifQ GO:0009399|GO:0030151 AL504_RS28015 954aa1566823ec6f8bd66baca00c9497 336 Gene3D G3DSA:3.10.520.10 48 332 5.3E-42 T 28-03-2018 AL504_RS28015 954aa1566823ec6f8bd66baca00c9497 336 PIRSF PIRSF006268 9 328 6.1E-62 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL504_RS28015 954aa1566823ec6f8bd66baca00c9497 336 SUPERFAMILY SSF143631 39 327 4.84E-74 T 28-03-2018 IPR003374 ApbE-like domain AL504_RS28015 954aa1566823ec6f8bd66baca00c9497 336 Pfam PF02424 ApbE family 50 314 7.2E-60 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL504_RS19325 7831c2ee7455bfeb399aa9826ff7c5fc 228 Pfam PF00857 Isochorismatase family 16 169 7.7E-28 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS19325 7831c2ee7455bfeb399aa9826ff7c5fc 228 Gene3D G3DSA:3.40.50.850 3 212 2.6E-33 T 28-03-2018 AL504_RS19325 7831c2ee7455bfeb399aa9826ff7c5fc 228 SUPERFAMILY SSF52499 5 207 8.9E-45 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS12660 3025ce41ec7138136ad6f05798954e86 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 268 7.6E-34 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS12660 3025ce41ec7138136ad6f05798954e86 376 SUPERFAMILY SSF111369 61 272 1.96E-41 T 28-03-2018 AL504_RS12660 3025ce41ec7138136ad6f05798954e86 376 Gene3D G3DSA:2.40.50.100 37 100 2.9E-7 T 28-03-2018 AL504_RS12660 3025ce41ec7138136ad6f05798954e86 376 Gene3D G3DSA:1.20.1600.10 104 272 1.5E-21 T 28-03-2018 AL504_RS12660 3025ce41ec7138136ad6f05798954e86 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 357 3.9E-76 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS18625 465b4195fc1532b82c23cedaeeee8b7c 210 Pfam PF01323 DSBA-like thioredoxin domain 109 184 2.5E-11 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL504_RS18625 465b4195fc1532b82c23cedaeeee8b7c 210 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS18625 465b4195fc1532b82c23cedaeeee8b7c 210 PIRSF PIRSF001488 4 210 4.1E-60 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL504_RS18625 465b4195fc1532b82c23cedaeeee8b7c 210 Pfam PF00085 Thioredoxin 48 86 1.5E-5 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL504_RS18625 465b4195fc1532b82c23cedaeeee8b7c 210 Gene3D G3DSA:3.40.30.10 10 206 2.4E-36 T 28-03-2018 AL504_RS18625 465b4195fc1532b82c23cedaeeee8b7c 210 SUPERFAMILY SSF52833 39 191 3.37E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 SUPERFAMILY SSF55874 266 429 3.12E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 Gene3D G3DSA:1.10.287.130 201 272 5.3E-11 T 28-03-2018 AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 SMART SM00304 158 210 7.4E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 Gene3D G3DSA:3.30.565.10 281 437 7.3E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 SMART SM00388 211 276 9.3E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 2.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 2.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 2.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 4.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 SMART SM00387 322 433 1.5E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 428 2.6E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04190 d48fab502213c30f82bb0bb982b91c5f 437 SUPERFAMILY SSF47384 196 275 2.55E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS21285 9688286d72d4fb32d3531fe9b8c0e586 195 Pfam PF00210 Ferritin-like domain 57 194 5.4E-31 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL504_RS21285 9688286d72d4fb32d3531fe9b8c0e586 195 PIRSF PIRSF018063 31 195 1.6E-61 T 28-03-2018 IPR014490 DNA-binding protein from starved cells-like AL504_RS21285 9688286d72d4fb32d3531fe9b8c0e586 195 SUPERFAMILY SSF47240 49 194 5.02E-40 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS21285 9688286d72d4fb32d3531fe9b8c0e586 195 Gene3D G3DSA:1.20.1260.10 29 195 6.3E-46 T 28-03-2018 IPR012347 Ferritin-related AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 SUPERFAMILY SSF47090 450 518 6.67E-17 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 Pfam PF01471 Putative peptidoglycan binding domain 463 518 1.7E-12 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 Gene3D G3DSA:1.10.101.10 449 521 7.6E-17 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 Gene3D G3DSA:1.10.530.10 312 448 1.9E-25 T 28-03-2018 AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 140 445 5.5E-75 T 28-03-2018 IPR011970 Lytic murein transglycosylase AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 Pfam PF13406 Transglycosylase SLT domain 140 440 4.7E-77 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 Gene3D G3DSA:1.10.8.350 205 306 9.9E-22 T 28-03-2018 AL504_RS29940 a0dd0f0ac82e4f131a3b1f5c0af1c88b 521 SUPERFAMILY SSF53955 128 448 9.14E-67 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 SUPERFAMILY SSF46785 7 122 1.47E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 Gene3D G3DSA:3.40.190.10 101 184 2.8E-6 T 28-03-2018 AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 Gene3D G3DSA:1.10.10.10 262 337 0.26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 SUPERFAMILY SSF53850 103 273 6.05E-19 T 28-03-2018 AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 Pfam PF03466 LysR substrate binding domain 101 297 3.0E-18 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 3.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 3.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 3.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 Gene3D G3DSA:1.10.10.10 10 95 9.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 73 1.5E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07180 8a8cda66ebbd53125101e00e69a543c5 337 Gene3D G3DSA:3.40.190.10 185 261 2.8E-10 T 28-03-2018 AL504_RS03770 c110bb64bc734e3d1a228eda80601a72 566 SUPERFAMILY SSF51905 28 359 2.85E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03770 c110bb64bc734e3d1a228eda80601a72 566 Gene3D G3DSA:3.50.50.60 36 565 4.0E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03770 c110bb64bc734e3d1a228eda80601a72 566 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 526 52.144 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AL504_RS03770 c110bb64bc734e3d1a228eda80601a72 566 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 42 524 5.7E-198 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AL504_RS03770 c110bb64bc734e3d1a228eda80601a72 566 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 526 7.5E-219 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AL504_RS16340 e0e282c8e29f34d80e48181f2ec46758 157 Gene3D G3DSA:3.10.129.10 8 155 6.8E-20 T 28-03-2018 AL504_RS16340 e0e282c8e29f34d80e48181f2ec46758 157 SUPERFAMILY SSF54637 7 144 5.49E-27 T 28-03-2018 IPR029069 HotDog domain AL504_RS16340 e0e282c8e29f34d80e48181f2ec46758 157 Pfam PF13279 Thioesterase-like superfamily 19 139 3.9E-7 T 28-03-2018 AL504_RS06095 eace2a139884ad014a18719b0e51da20 275 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 275 74.457 T 28-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AL504_RS06095 eace2a139884ad014a18719b0e51da20 275 Pfam PF03618 Kinase/pyrophosphorylase 10 267 6.2E-79 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 Gene3D G3DSA:1.10.10.10 1 82 2.0E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 SUPERFAMILY SSF55781 68 332 1.63E-60 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 SUPERFAMILY SSF46785 1 79 7.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 PIRSF PIRSF005485 1 334 1.9E-106 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 323 25.905 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 Gene3D G3DSA:3.30.450.40 178 334 6.7E-43 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 329 2.1E-91 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 Pfam PF01628 HrcA protein C terminal domain 100 316 3.3E-57 T 28-03-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AL504_RS13460 a99dbb09300165b858df66baee1abc44 334 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 6 70 1.4E-7 T 28-03-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.5E-70 T 28-03-2018 AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 Gene3D G3DSA:3.40.50.720 43 245 1.3E-66 T 28-03-2018 AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 Gene3D G3DSA:3.40.50.720 1 42 3.0E-9 T 28-03-2018 AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 8.1E-6 T 28-03-2018 AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.4E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.4E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.4E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.4E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS21975 0ae80353108969d6554a5a5cd2ef2cf2 245 SUPERFAMILY SSF51735 5 244 9.19E-84 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS25500 9a0731dd6d5c26f7a83a683096c0ac61 167 Pfam PF08534 Redoxin 4 164 1.2E-35 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL504_RS25500 9a0731dd6d5c26f7a83a683096c0ac61 167 SUPERFAMILY SSF52833 1 165 3.23E-33 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25500 9a0731dd6d5c26f7a83a683096c0ac61 167 Gene3D G3DSA:3.40.30.10 1 166 5.4E-23 T 28-03-2018 AL504_RS28040 ae8a039464cd60bd30226798b6898aaa 638 Gene3D G3DSA:2.60.40.420 503 633 2.8E-34 T 28-03-2018 IPR008972 Cupredoxin AL504_RS28040 ae8a039464cd60bd30226798b6898aaa 638 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 37 1.1E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL504_RS28040 ae8a039464cd60bd30226798b6898aaa 638 Hamap MF_00716 Nitrous-oxide reductase [nosZ]. 2 634 57.147 T 28-03-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS28040 ae8a039464cd60bd30226798b6898aaa 638 SUPERFAMILY SSF50974 52 504 1.44E-142 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AL504_RS28040 ae8a039464cd60bd30226798b6898aaa 638 SUPERFAMILY SSF49503 506 634 1.79E-36 T 28-03-2018 IPR008972 Cupredoxin AL504_RS28040 ae8a039464cd60bd30226798b6898aaa 638 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 11 632 0.0 T 28-03-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AL504_RS28040 ae8a039464cd60bd30226798b6898aaa 638 Gene3D G3DSA:2.130.10.10 51 502 4.5E-171 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 Gene3D G3DSA:3.40.50.300 2 232 6.8E-50 T 28-03-2018 AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 Pfam PF08402 TOBE domain 271 341 3.8E-5 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 Gene3D G3DSA:2.40.50.140 233 334 1.2E-10 T 28-03-2018 AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 Pfam PF00005 ABC transporter 21 158 3.8E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 SUPERFAMILY SSF52540 10 240 4.4E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 SUPERFAMILY SSF50331 234 347 2.38E-17 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS05465 d30bfe9867a6fdac79c865d321bb61df 361 SMART SM00382 27 207 2.4E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS06585 7850ffa0074996330d761f9edc384f86 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 21 174 8.0E-53 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL504_RS06585 7850ffa0074996330d761f9edc384f86 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 172 1.6E-46 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL504_RS06585 7850ffa0074996330d761f9edc384f86 183 SUPERFAMILY SSF51182 2 175 4.6E-63 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS06585 7850ffa0074996330d761f9edc384f86 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 174 5.0E-58 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL504_RS06585 7850ffa0074996330d761f9edc384f86 183 Gene3D G3DSA:2.60.120.10 1 179 1.6E-62 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS06360 0cf743f03bc19dcb2029864a1adf0d2c 107 Pfam PF04347 Flagellar biosynthesis protein, FliO 25 105 4.1E-21 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL504_RS06360 0cf743f03bc19dcb2029864a1adf0d2c 107 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 13 80 1.7E-23 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 Gene3D G3DSA:3.50.50.60 1 379 1.8E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 SUPERFAMILY SSF54373 206 300 1.65E-37 T 28-03-2018 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 173 188 4.9E-7 T 28-03-2018 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.9E-7 T 28-03-2018 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 SUPERFAMILY SSF51905 301 440 6.05E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 SUPERFAMILY SSF51905 1 204 6.05E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 52 5.7E-6 T 28-03-2018 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 438 540 6.4E-50 T 28-03-2018 AL504_RS11950 07814d44804cd95ea40bf9c43e3ba9de 542 SUPERFAMILY SSF54862 442 540 7.43E-27 T 28-03-2018 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.7E-43 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.7E-43 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.7E-43 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.7E-43 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.7E-43 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.9E-76 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 SUPERFAMILY SSF53850 6 220 5.98E-81 T 28-03-2018 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 Gene3D G3DSA:3.40.190.10 108 200 1.9E-37 T 28-03-2018 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 Gene3D G3DSA:3.30.160.40 222 305 7.6E-23 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 SUPERFAMILY SSF54782 221 310 5.62E-25 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 297 1.2E-107 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 37.99 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 Gene3D G3DSA:3.40.190.10 2 107 3.8E-43 T 28-03-2018 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 PIRSF PIRSF001438 2 312 4.7E-117 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10675 ea80f97d3beacf792a5c4cffbf9a094d 315 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 296 1.7E-18 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS26715 d9ba946ea42e2d6dff65904e7ac1fff1 808 Pfam PF12607 Protein of unknown function (DUF3772) 139 201 1.7E-18 T 28-03-2018 IPR022249 Domain of unknown function DUF3772 AL504_RS26715 d9ba946ea42e2d6dff65904e7ac1fff1 808 Pfam PF00924 Mechanosensitive ion channel 575 771 4.5E-38 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL504_RS26715 d9ba946ea42e2d6dff65904e7ac1fff1 808 SUPERFAMILY SSF82861 532 614 2.09E-9 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL504_RS26715 d9ba946ea42e2d6dff65904e7ac1fff1 808 SUPERFAMILY SSF82689 683 777 2.48E-13 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL504_RS26715 d9ba946ea42e2d6dff65904e7ac1fff1 808 SUPERFAMILY SSF50182 616 681 3.07E-15 T 28-03-2018 IPR010920 LSM domain AL504_RS26715 d9ba946ea42e2d6dff65904e7ac1fff1 808 Gene3D G3DSA:3.30.70.100 687 777 1.7E-11 T 28-03-2018 AL504_RS26715 d9ba946ea42e2d6dff65904e7ac1fff1 808 Gene3D G3DSA:2.30.30.60 632 682 1.7E-13 T 28-03-2018 AL504_RS12505 420459feb9a3b635735c47ba1f23f25a 494 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 481 18.348 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AL504_RS12505 420459feb9a3b635735c47ba1f23f25a 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 7.0E-5 T 28-03-2018 AL504_RS12505 420459feb9a3b635735c47ba1f23f25a 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 7.0E-5 T 28-03-2018 AL504_RS12505 420459feb9a3b635735c47ba1f23f25a 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 7.0E-5 T 28-03-2018 AL504_RS12505 420459feb9a3b635735c47ba1f23f25a 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 7.0E-5 T 28-03-2018 AL504_RS12505 420459feb9a3b635735c47ba1f23f25a 494 Pfam PF00361 Proton-conducting membrane transporter 127 429 8.5E-75 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12505 420459feb9a3b635735c47ba1f23f25a 494 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 10 478 6.4E-140 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 Gene3D G3DSA:3.40.50.1980 206 327 7.4E-41 T 28-03-2018 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 324 3.6E-85 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00691 Adhesin B signature 59 77 9.2E-17 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00691 Adhesin B signature 284 302 9.2E-17 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00691 Adhesin B signature 305 323 9.2E-17 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00691 Adhesin B signature 34 55 9.2E-17 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00691 Adhesin B signature 78 97 9.2E-17 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 SUPERFAMILY SSF53807 33 327 4.91E-91 T 28-03-2018 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 Gene3D G3DSA:3.40.50.1980 24 205 1.1E-56 T 28-03-2018 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00690 Adhesin family signature 78 95 3.6E-17 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00690 Adhesin family signature 65 78 3.6E-17 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00690 Adhesin family signature 292 311 3.6E-17 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL504_RS20575 205b6684d2611f554c0a320016fc40c4 328 PRINTS PR00690 Adhesin family signature 34 52 3.6E-17 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 444 68.838 T 28-03-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 SUPERFAMILY SSF52402 4 185 6.41E-34 T 28-03-2018 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 420 1.6E-158 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 Gene3D G3DSA:3.90.1260.10 179 374 2.0E-58 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 SUPERFAMILY SSF69864 190 435 3.92E-77 T 28-03-2018 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 Pfam PF00764 Arginosuccinate synthase 16 394 2.3E-60 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 Gene3D G3DSA:3.40.50.620 3 178 7.2E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10115 753e8e11ec4eb697dfc43f9c4cadb51c 446 Gene3D G3DSA:1.10.287.400 378 437 1.6E-30 T 28-03-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS21650 0c948d5d10fe994b81b771a89afd888e 108 Gene3D G3DSA:3.40.30.10 2 108 1.5E-32 T 28-03-2018 AL504_RS21650 0c948d5d10fe994b81b771a89afd888e 108 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 2.0E-45 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related AL504_RS21650 0c948d5d10fe994b81b771a89afd888e 108 SUPERFAMILY SSF52833 1 106 2.9E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS21650 0c948d5d10fe994b81b771a89afd888e 108 PIRSF PIRSF005894 1 108 3.3E-48 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AL504_RS21650 0c948d5d10fe994b81b771a89afd888e 108 Pfam PF00462 Glutaredoxin 17 82 1.7E-18 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 Gene3D G3DSA:2.40.128.130 1080 1416 1.6E-59 T 28-03-2018 AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 371 420 4.4E-14 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 423 471 1.3E-5 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 274 318 5.3E-8 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 322 369 7.9E-7 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 108 155 2.2E-12 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 SUPERFAMILY SSF103515 1089 1416 8.5E-69 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 Pfam PF03797 Autotransporter beta-domain 1148 1396 2.8E-61 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 Pfam PF12951 Passenger-associated-transport-repeat 860 890 0.0011 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 Pfam PF12951 Passenger-associated-transport-repeat 555 580 0.42 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 Pfam PF12951 Passenger-associated-transport-repeat 771 800 5.1E-12 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 SMART SM00869 1144 1406 3.2E-50 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 860 891 1.5E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 770 800 1.7E-12 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 Pfam PF13018 Extended Signal Peptide of Type V secretion system 13 36 1.4E-6 T 28-03-2018 IPR024973 ESPR domain AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 SUPERFAMILY SSF51126 701 998 7.22E-22 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS23385 c0531d1994c8176967f4b833af51182c 1416 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 930 1416 2.5E-58 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS25275 024294de5fb3378e336b4bce65161d4a 610 SUPERFAMILY SSF75304 13 458 4.71E-108 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS25275 024294de5fb3378e336b4bce65161d4a 610 Pfam PF01425 Amidase 74 446 4.6E-84 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS25275 024294de5fb3378e336b4bce65161d4a 610 Gene3D G3DSA:3.10.490.10 475 610 1.2E-29 T 28-03-2018 AL504_RS25275 024294de5fb3378e336b4bce65161d4a 610 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 46 603 2.1E-253 T 28-03-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 AL504_RS25275 024294de5fb3378e336b4bce65161d4a 610 Gene3D G3DSA:3.90.1300.10 9 461 2.3E-107 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 SUPERFAMILY SSF50692 1076 1235 1.33E-44 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 SUPERFAMILY SSF53706 4 1067 0.0 T 28-03-2018 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Gene3D G3DSA:2.40.40.20 1046 1235 6.8E-43 T 28-03-2018 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Gene3D G3DSA:3.40.50.740 628 928 8.4E-41 T 28-03-2018 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Gene3D G3DSA:3.40.50.740 108 213 3.4E-4 T 28-03-2018 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.2E-16 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Gene3D G3DSA:4.10.1200.10 1 26 2.3E-12 T 28-03-2018 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Pfam PF00384 Molybdopterin oxidoreductase 108 830 1.2E-157 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 28-03-2018 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1233 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Gene3D G3DSA:3.40.228.10 224 617 1.4E-85 T 28-03-2018 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 Pfam PF01568 Molydopterin dinucleotide binding domain 1086 1200 4.0E-20 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS02680 6ecf2a09cbe98e1b9701de880cb8ed06 1251 SMART SM00926 43 105 1.0E-8 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12335 8179409fc251be4edc98990dae28cac4 336 Gene3D G3DSA:3.40.190.10 27 161 1.9E-20 T 28-03-2018 AL504_RS12335 8179409fc251be4edc98990dae28cac4 336 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 312 4.6E-65 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AL504_RS12335 8179409fc251be4edc98990dae28cac4 336 SUPERFAMILY SSF53850 32 328 7.6E-76 T 28-03-2018 AL504_RS12335 8179409fc251be4edc98990dae28cac4 336 Gene3D G3DSA:3.40.190.10 162 324 6.8E-33 T 28-03-2018 AL504_RS27970 75c7a05ab13882a45ce7aed897215476 174 Gene3D G3DSA:3.10.450.50 55 173 2.4E-12 T 28-03-2018 AL504_RS27970 75c7a05ab13882a45ce7aed897215476 174 SUPERFAMILY SSF54427 54 172 4.88E-14 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS27970 75c7a05ab13882a45ce7aed897215476 174 Pfam PF14534 Domain of unknown function (DUF4440) 56 163 1.7E-10 T 28-03-2018 IPR027843 Domain of unknown function DUF4440 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 PIRSF PIRSF000456 1 264 1.4E-97 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 Gene3D G3DSA:2.160.10.10 2 88 9.7E-19 T 28-03-2018 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 Gene3D G3DSA:1.20.1180.10 209 264 4.2E-24 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 Gene3D G3DSA:2.160.10.10 89 208 2.7E-26 T 28-03-2018 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 2 263 44.891 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 SUPERFAMILY SSF51161 5 261 9.82E-77 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 261 8.8E-98 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 262 2.0E-27 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 135 5.7E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS06140 89a107ff50d5c71f080fef2e3ce724f7 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 42 1.9E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 Pfam PF00887 Acyl CoA binding protein 424 501 2.4E-9 T 28-03-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 SUPERFAMILY SSF54427 273 383 5.79E-13 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 Gene3D G3DSA:1.20.80.10 415 505 5.2E-12 T 28-03-2018 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 Gene3D G3DSA:3.10.450.50 251 409 3.1E-11 T 28-03-2018 AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 Pfam PF12146 Serine aminopeptidase, S33 8 238 3.2E-13 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 SUPERFAMILY SSF53474 8 252 7.02E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 Gene3D G3DSA:3.40.50.1820 3 250 8.8E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 SUPERFAMILY SSF47027 421 504 3.27E-12 T 28-03-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 AL504_RS25050 422c330bf5101aef0dd06ffbf31f62d9 505 Pfam PF12680 SnoaL-like domain 276 378 2.1E-7 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS28720 9de590fd08f5faa0b10b7d38815c772c 295 SUPERFAMILY SSF53850 83 286 1.54E-37 T 28-03-2018 AL504_RS28720 9de590fd08f5faa0b10b7d38815c772c 295 Gene3D G3DSA:3.40.190.10 86 175 5.7E-15 T 28-03-2018 AL504_RS28720 9de590fd08f5faa0b10b7d38815c772c 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 4.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS28720 9de590fd08f5faa0b10b7d38815c772c 295 SUPERFAMILY SSF46785 2 77 1.18E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28720 9de590fd08f5faa0b10b7d38815c772c 295 Gene3D G3DSA:1.10.10.10 1 80 8.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28720 9de590fd08f5faa0b10b7d38815c772c 295 Gene3D G3DSA:3.40.190.10 176 261 2.6E-15 T 28-03-2018 AL504_RS28720 9de590fd08f5faa0b10b7d38815c772c 295 Pfam PF03466 LysR substrate binding domain 87 286 6.0E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14360 65fb0707fe617eae1ebb917fbc23684d 242 SUPERFAMILY SSF69593 3 239 2.48E-38 T 28-03-2018 AL504_RS14360 65fb0707fe617eae1ebb917fbc23684d 242 SMART SM00563 71 186 3.4E-29 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS14360 65fb0707fe617eae1ebb917fbc23684d 242 Pfam PF01553 Acyltransferase 59 183 1.0E-19 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS14360 65fb0707fe617eae1ebb917fbc23684d 242 Gene3D G3DSA:3.40.1130.10 32 241 4.5E-37 T 28-03-2018 AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 Gene3D G3DSA:1.25.40.20 27 116 4.6E-16 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 Pfam PF12796 Ankyrin repeats (3 copies) 116 206 4.1E-8 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 Gene3D G3DSA:1.20.120.660 117 159 3.2E-11 T 28-03-2018 AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 Gene3D G3DSA:1.25.40.20 160 234 1.1E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 SMART SM00248 208 234 1100.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 SMART SM00248 137 166 1.3 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 SMART SM00248 71 100 0.17 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 SMART SM00248 170 204 200.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 Pfam PF00023 Ankyrin repeat 71 102 0.015 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS23840 ab80a20e56cfe6f778729a6ad2389958 234 SUPERFAMILY SSF48403 42 233 3.62E-41 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 SUPERFAMILY SSF102886 8 302 1.44E-130 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 168 192 - T 28-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PIRSF PIRSF000166 5 303 9.4E-119 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PRINTS PR00073 Coprogen oxidase signature 30 46 1.1E-79 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PRINTS PR00073 Coprogen oxidase signature 89 113 1.1E-79 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PRINTS PR00073 Coprogen oxidase signature 264 290 1.1E-79 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PRINTS PR00073 Coprogen oxidase signature 236 263 1.1E-79 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PRINTS PR00073 Coprogen oxidase signature 127 149 1.1E-79 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PRINTS PR00073 Coprogen oxidase signature 164 193 1.1E-79 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 PRINTS PR00073 Coprogen oxidase signature 47 68 1.1E-79 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 Gene3D G3DSA:3.40.1500.10 5 303 8.2E-132 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 279 53.213 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS09445 dc5ce21fce52b8719ad2488343957277 303 Pfam PF01218 Coproporphyrinogen III oxidase 10 302 3.3E-125 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL504_RS15060 6d192230f087875f00dd93758c243481 465 SUPERFAMILY SSF46785 5 75 1.63E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15060 6d192230f087875f00dd93758c243481 465 Gene3D G3DSA:3.90.1150.10 345 463 1.1E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS15060 6d192230f087875f00dd93758c243481 465 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.9E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS15060 6d192230f087875f00dd93758c243481 465 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.9E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS15060 6d192230f087875f00dd93758c243481 465 Pfam PF00155 Aminotransferase class I and II 139 463 2.7E-35 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS15060 6d192230f087875f00dd93758c243481 465 SUPERFAMILY SSF53383 110 455 7.61E-78 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS15060 6d192230f087875f00dd93758c243481 465 Gene3D G3DSA:1.10.10.10 1 73 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15060 6d192230f087875f00dd93758c243481 465 SMART SM00345 12 71 3.7E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS15060 6d192230f087875f00dd93758c243481 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 1.1E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS15060 6d192230f087875f00dd93758c243481 465 Gene3D G3DSA:3.40.640.10 122 344 6.9E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS09240 a2927e9296f9103183998e1015a7a938 122 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 3.0E-52 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AL504_RS09240 a2927e9296f9103183998e1015a7a938 122 SUPERFAMILY SSF50692 1 119 8.82E-48 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS09240 a2927e9296f9103183998e1015a7a938 122 Pfam PF02261 Aspartate decarboxylase 1 114 3.7E-49 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AL504_RS09240 a2927e9296f9103183998e1015a7a938 122 PIRSF PIRSF006246 1 121 4.8E-51 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AL504_RS09240 a2927e9296f9103183998e1015a7a938 122 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 122 70.101 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AL504_RS09240 a2927e9296f9103183998e1015a7a938 122 Gene3D G3DSA:2.40.40.20 1 117 1.3E-51 T 28-03-2018 AL504_RS09240 a2927e9296f9103183998e1015a7a938 122 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 95 1.0E-46 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AL504_RS18350 dd1151ea136fb6f01947014e675c81dd 815 Gene3D G3DSA:3.40.50.300 229 386 0.27 T 28-03-2018 AL504_RS18350 dd1151ea136fb6f01947014e675c81dd 815 Gene3D G3DSA:3.40.50.300 410 785 3.9E-33 T 28-03-2018 AL504_RS18350 dd1151ea136fb6f01947014e675c81dd 815 SUPERFAMILY SSF52540 399 738 2.82E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18350 dd1151ea136fb6f01947014e675c81dd 815 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 181 388 5.0E-14 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AL504_RS18350 dd1151ea136fb6f01947014e675c81dd 815 SMART SM00382 440 704 2.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 Pfam PF03466 LysR substrate binding domain 90 290 9.3E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 Gene3D G3DSA:3.40.190.10 91 177 1.1E-26 T 28-03-2018 AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 Gene3D G3DSA:3.40.190.10 178 265 9.6E-22 T 28-03-2018 AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 SUPERFAMILY SSF46785 3 113 1.96E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 SUPERFAMILY SSF53850 92 294 1.38E-47 T 28-03-2018 AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.6E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04735 49d368a50c9da3830e17aa1cbb14b1a3 304 Gene3D G3DSA:1.10.10.10 1 85 3.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01570 2d7e1fe6869e25e23c14c81e79dc9f19 323 Pfam PF13343 Bacterial extracellular solute-binding protein 75 288 6.8E-31 T 28-03-2018 AL504_RS01570 2d7e1fe6869e25e23c14c81e79dc9f19 323 Gene3D G3DSA:3.40.190.10 26 143 1.9E-18 T 28-03-2018 AL504_RS01570 2d7e1fe6869e25e23c14c81e79dc9f19 323 SUPERFAMILY SSF53850 25 300 1.76E-62 T 28-03-2018 AL504_RS01570 2d7e1fe6869e25e23c14c81e79dc9f19 323 Gene3D G3DSA:3.40.190.10 144 279 2.5E-22 T 28-03-2018 AL504_RS01570 2d7e1fe6869e25e23c14c81e79dc9f19 323 PIRSF PIRSF002825 15 319 2.5E-49 T 28-03-2018 IPR026045 Ferric binding protein AL504_RS30010 87a5d53d862ff64cc0b19f6bc83c3b5a 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 380 3.1E-42 T 28-03-2018 IPR000160 GGDEF domain AL504_RS30010 87a5d53d862ff64cc0b19f6bc83c3b5a 398 Gene3D G3DSA:3.30.70.270 216 391 3.9E-53 T 28-03-2018 AL504_RS30010 87a5d53d862ff64cc0b19f6bc83c3b5a 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 384 7.8E-46 T 28-03-2018 IPR000160 GGDEF domain AL504_RS30010 87a5d53d862ff64cc0b19f6bc83c3b5a 398 SUPERFAMILY SSF55073 228 385 1.1E-44 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS30010 87a5d53d862ff64cc0b19f6bc83c3b5a 398 SMART SM00267 212 384 2.3E-56 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04610 40985f070036597595617cc2f2e1907a 437 Gene3D G3DSA:3.40.190.10 230 383 2.3E-13 T 28-03-2018 AL504_RS04610 40985f070036597595617cc2f2e1907a 437 SUPERFAMILY SSF53850 22 426 1.23E-82 T 28-03-2018 AL504_RS04610 40985f070036597595617cc2f2e1907a 437 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AL504_RS04610 40985f070036597595617cc2f2e1907a 437 Pfam PF13416 Bacterial extracellular solute-binding protein 45 361 9.3E-51 T 28-03-2018 AL504_RS04610 40985f070036597595617cc2f2e1907a 437 Gene3D G3DSA:3.40.190.10 25 216 1.4E-37 T 28-03-2018 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 Pfam PF13932 GidA associated domain 403 624 2.4E-76 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 Pfam PF01134 Glucose inhibited division protein A 8 399 1.4E-165 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 629 1.8E-270 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 SUPERFAMILY SSF51905 6 66 1.16E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 SUPERFAMILY SSF51905 97 262 1.16E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 632 42.83 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 SMART SM01228 554 625 5.8E-43 T 28-03-2018 AL504_RS19485 bcd84dd7e7ce73a86f0abda504f6f7c2 639 Gene3D G3DSA:3.50.50.60 5 264 6.9E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13585 8b736afc2ef2c8ad4716de12ec04688d 192 TIGRFAM TIGR01841 phasin: phasin family protein 27 112 1.2E-22 T 28-03-2018 IPR010127 Phasin, subfamily 1 AL504_RS13585 8b736afc2ef2c8ad4716de12ec04688d 192 Pfam PF09361 Phasin protein 7 105 1.4E-24 T 28-03-2018 IPR018968 Phasin AL504_RS13175 6e9c770acdf52205ec7843e893e68fc5 326 SUPERFAMILY SSF53850 114 279 1.28E-9 T 28-03-2018 AL504_RS13175 6e9c770acdf52205ec7843e893e68fc5 326 Gene3D G3DSA:3.40.190.10 128 236 5.5E-10 T 28-03-2018 AL504_RS13175 6e9c770acdf52205ec7843e893e68fc5 326 PIRSF PIRSF017082 1 325 1.0E-70 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS13175 6e9c770acdf52205ec7843e893e68fc5 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 1.5E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS12165 984dbbc247d8563f5cf596158b28826a 328 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 6 328 68.321 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL504_RS12165 984dbbc247d8563f5cf596158b28826a 328 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 239 327 9.4E-34 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL504_RS12165 984dbbc247d8563f5cf596158b28826a 328 Gene3D G3DSA:3.40.47.10 2 171 3.7E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS12165 984dbbc247d8563f5cf596158b28826a 328 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 328 2.5E-119 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL504_RS12165 984dbbc247d8563f5cf596158b28826a 328 SUPERFAMILY SSF53901 5 327 9.15E-67 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS12165 984dbbc247d8563f5cf596158b28826a 328 Gene3D G3DSA:3.40.47.10 172 328 2.3E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS12165 984dbbc247d8563f5cf596158b28826a 328 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 193 7.6E-35 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL504_RS09515 bb4a62b405a0f3ec1b7ba0f0d1b23b85 437 Gene3D G3DSA:1.10.150.130 99 213 2.4E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS09515 bb4a62b405a0f3ec1b7ba0f0d1b23b85 437 Gene3D G3DSA:1.10.443.10 217 406 1.7E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS09515 bb4a62b405a0f3ec1b7ba0f0d1b23b85 437 Pfam PF00589 Phage integrase family 234 385 1.6E-7 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS09515 bb4a62b405a0f3ec1b7ba0f0d1b23b85 437 SUPERFAMILY SSF56349 105 404 4.71E-37 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS09515 bb4a62b405a0f3ec1b7ba0f0d1b23b85 437 Pfam PF13356 Arm DNA-binding domain 11 95 5.7E-18 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AL504_RS25190 e7dffc9cb2b9d489e8d90e2476435e07 261 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS25190 e7dffc9cb2b9d489e8d90e2476435e07 261 Gene3D G3DSA:3.40.50.300 1 249 6.1E-58 T 28-03-2018 AL504_RS25190 e7dffc9cb2b9d489e8d90e2476435e07 261 SMART SM00382 26 219 1.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS25190 e7dffc9cb2b9d489e8d90e2476435e07 261 SUPERFAMILY SSF52540 2 234 1.49E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25190 e7dffc9cb2b9d489e8d90e2476435e07 261 Pfam PF00005 ABC transporter 17 171 1.3E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21750 0458cce30afa8c80b4581c4877e79d5b 568 SUPERFAMILY SSF56425 343 508 2.2E-35 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS21750 0458cce30afa8c80b4581c4877e79d5b 568 Gene3D G3DSA:3.90.700.10 364 497 8.8E-37 T 28-03-2018 AL504_RS21750 0458cce30afa8c80b4581c4877e79d5b 568 SUPERFAMILY SSF51905 187 337 6.49E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21750 0458cce30afa8c80b4581c4877e79d5b 568 SUPERFAMILY SSF51905 507 565 6.49E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21750 0458cce30afa8c80b4581c4877e79d5b 568 SUPERFAMILY SSF51905 4 122 6.49E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21750 0458cce30afa8c80b4581c4877e79d5b 568 Pfam PF00890 FAD binding domain 11 549 5.9E-94 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS21750 0458cce30afa8c80b4581c4877e79d5b 568 Gene3D G3DSA:3.50.50.60 5 363 2.4E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS08515 ff3577c978e8cde4714a0f674317f410 426 PIRSF PIRSF006066 1 426 9.4E-143 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS08515 ff3577c978e8cde4714a0f674317f410 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 1.0E-113 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS08515 ff3577c978e8cde4714a0f674317f410 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 420 1.4E-142 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS06060 b643bdb5a8dcdea0af33a0ead13439aa 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 145 6.0E-52 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL504_RS06060 b643bdb5a8dcdea0af33a0ead13439aa 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 2.0E-64 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL504_RS06060 b643bdb5a8dcdea0af33a0ead13439aa 155 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site AL504_RS06060 b643bdb5a8dcdea0af33a0ead13439aa 155 SUPERFAMILY SSF74982 3 127 3.01E-48 T 28-03-2018 IPR023620 Small protein B AL504_RS06060 b643bdb5a8dcdea0af33a0ead13439aa 155 Pfam PF01668 SmpB protein 3 146 2.4E-57 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL504_RS06060 b643bdb5a8dcdea0af33a0ead13439aa 155 Gene3D G3DSA:2.40.280.10 3 122 7.1E-46 T 28-03-2018 IPR023620 Small protein B AL504_RS06060 b643bdb5a8dcdea0af33a0ead13439aa 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 70.844 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL504_RS09140 495fb92f6e3073215867b985c86ae606 428 Pfam PF04551 GcpE protein 35 415 1.2E-111 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL504_RS09140 495fb92f6e3073215867b985c86ae606 428 Gene3D G3DSA:3.20.20.70 42 298 9.7E-6 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS09140 495fb92f6e3073215867b985c86ae606 428 PIRSF PIRSF004640 15 424 3.4E-126 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL504_RS09140 495fb92f6e3073215867b985c86ae606 428 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 23 417 28.362 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL504_RS09140 495fb92f6e3073215867b985c86ae606 428 SUPERFAMILY SSF56014 314 422 2.19E-8 T 28-03-2018 AL504_RS09140 495fb92f6e3073215867b985c86ae606 428 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 21 414 2.8E-114 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL504_RS05250 138743398923cb2245b63052728c1d65 351 SUPERFAMILY SSF141986 188 339 9.02E-43 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AL504_RS05250 138743398923cb2245b63052728c1d65 351 PIRSF PIRSF028757 51 350 2.2E-69 T 28-03-2018 IPR003507 Peptidase family S66 AL504_RS05250 138743398923cb2245b63052728c1d65 351 Pfam PF02016 LD-carboxypeptidase 59 333 3.1E-70 T 28-03-2018 IPR003507 Peptidase family S66 AL504_RS05250 138743398923cb2245b63052728c1d65 351 Gene3D G3DSA:3.40.50.10740 51 202 1.9E-39 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AL504_RS05250 138743398923cb2245b63052728c1d65 351 Gene3D G3DSA:3.50.30.60 203 349 1.8E-41 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AL504_RS05250 138743398923cb2245b63052728c1d65 351 SUPERFAMILY SSF52317 58 205 3.84E-30 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS30260 5c56fe5c20aeebbc3946695004a1bce3 342 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 135 338 2.2E-38 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS30260 5c56fe5c20aeebbc3946695004a1bce3 342 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 119 1.8E-14 T 28-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AL504_RS30260 5c56fe5c20aeebbc3946695004a1bce3 342 Gene3D G3DSA:3.30.429.10 1 114 9.6E-36 T 28-03-2018 AL504_RS30260 5c56fe5c20aeebbc3946695004a1bce3 342 SUPERFAMILY SSF55331 2 124 3.85E-30 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL504_RS30260 5c56fe5c20aeebbc3946695004a1bce3 342 SUPERFAMILY SSF56529 132 339 7.59E-48 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS30260 5c56fe5c20aeebbc3946695004a1bce3 342 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 134 337 2.2E-75 T 28-03-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 AL504_RS30260 5c56fe5c20aeebbc3946695004a1bce3 342 Gene3D G3DSA:3.90.850.10 115 341 1.2E-45 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 SUPERFAMILY SSF51735 164 439 6.07E-83 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 1.4E-25 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 Gene3D G3DSA:3.40.718.10 452 747 2.2E-51 T 28-03-2018 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 Gene3D G3DSA:3.40.50.10380 6 161 3.9E-34 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 SMART SM01274 19 152 2.5E-76 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 SUPERFAMILY SSF53659 430 761 9.05E-86 T 28-03-2018 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 PIRSF PIRSF036684 1 764 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 Gene3D G3DSA:3.40.50.720 162 451 9.5E-80 T 28-03-2018 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 SUPERFAMILY SSF53223 11 162 1.65E-51 T 28-03-2018 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 756 2.5E-93 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 Pfam PF03949 Malic enzyme, NAD binding domain 166 361 2.8E-19 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL504_RS24965 a1dfabbc709ab7267c15ab40fa33f6bd 764 SMART SM00919 164 401 1.8E-132 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL504_RS29810 e6133591470b13b58584aba382eb76cf 279 Gene3D G3DSA:3.40.190.10 135 279 1.9E-47 T 28-03-2018 AL504_RS29810 e6133591470b13b58584aba382eb76cf 279 Gene3D G3DSA:3.40.190.10 39 134 9.7E-18 T 28-03-2018 AL504_RS29810 e6133591470b13b58584aba382eb76cf 279 SUPERFAMILY SSF53850 40 279 2.56E-77 T 28-03-2018 AL504_RS29810 e6133591470b13b58584aba382eb76cf 279 Pfam PF03180 NLPA lipoprotein 40 279 2.5E-82 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS29810 e6133591470b13b58584aba382eb76cf 279 PIRSF PIRSF002854 2 279 1.6E-90 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS29810 e6133591470b13b58584aba382eb76cf 279 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 34 276 7.4E-72 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS19770 aff0cb7010ec1f6699987347b4e42797 309 SUPERFAMILY SSF53448 5 235 1.69E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS19770 aff0cb7010ec1f6699987347b4e42797 309 Pfam PF00535 Glycosyl transferase family 2 7 145 2.5E-12 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS19770 aff0cb7010ec1f6699987347b4e42797 309 Gene3D G3DSA:3.90.550.10 2 257 6.9E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 6 242 2.5E-115 T 28-03-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 195 5.0E-6 T 28-03-2018 AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 SUPERFAMILY SSF51735 6 242 9.56E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 Gene3D G3DSA:3.40.50.720 1 41 1.4E-8 T 28-03-2018 AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 Gene3D G3DSA:3.40.50.720 42 243 3.6E-56 T 28-03-2018 AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 242 1.1E-54 T 28-03-2018 AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.8E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.8E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.8E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.8E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08045 17d30c2df468d2f1311194ac1aca1960 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.8E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 TIGRFAM TIGR03138 QueF: queuine synthase 32 304 7.5E-126 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 Gene3D G3DSA:3.30.1130.10 167 304 1.3E-48 T 28-03-2018 AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 PIRSF PIRSF004750 29 304 9.3E-123 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 304 147.584 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 Gene3D G3DSA:3.30.1130.10 44 159 1.2E-37 T 28-03-2018 AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 Pfam PF14489 QueF-like protein 217 292 3.6E-28 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 44 152 1.4E-45 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL504_RS27170 d9aa5684def32e3f307c1bcf5b1dbdf0 304 SUPERFAMILY SSF55620 208 287 7.12E-11 T 28-03-2018 AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 6.6E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 6.6E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 6.6E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 Gene3D G3DSA:3.30.70.920 59 155 5.5E-34 T 28-03-2018 AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 SUPERFAMILY SSF54909 66 157 1.61E-19 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 Pfam PF01037 Lrp/AsnC ligand binding domain 72 149 5.5E-23 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 Gene3D G3DSA:1.10.10.10 7 58 9.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 SUPERFAMILY SSF46785 5 65 1.12E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 6.9E-22 T 28-03-2018 AL504_RS14865 aca08c68fc8e91870defdc52a0db88f1 158 SMART SM00344 6 118 3.6E-43 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS28705 fca238e9efbc69c38e3d12655e5e3723 509 Pfam PF07690 Major Facilitator Superfamily 24 416 1.8E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS28705 fca238e9efbc69c38e3d12655e5e3723 509 Gene3D G3DSA:1.20.1250.20 259 509 3.0E-21 T 28-03-2018 AL504_RS28705 fca238e9efbc69c38e3d12655e5e3723 509 SUPERFAMILY SSF103473 255 426 6.67E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS28705 fca238e9efbc69c38e3d12655e5e3723 509 SUPERFAMILY SSF103473 7 197 6.67E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS28705 fca238e9efbc69c38e3d12655e5e3723 509 SUPERFAMILY SSF103473 478 504 6.67E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS28705 fca238e9efbc69c38e3d12655e5e3723 509 Gene3D G3DSA:1.20.1250.20 8 203 2.1E-32 T 28-03-2018 AL504_RS28705 fca238e9efbc69c38e3d12655e5e3723 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 499 3.6E-133 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS29785 186408234302acdc1b8e621373834ec2 337 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 293 3.6E-20 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS29785 186408234302acdc1b8e621373834ec2 337 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 190 2.0E-44 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS29785 186408234302acdc1b8e621373834ec2 337 SUPERFAMILY SSF48179 195 293 4.17E-23 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS29785 186408234302acdc1b8e621373834ec2 337 PIRSF PIRSF000105 1 321 6.2E-77 T 28-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AL504_RS29785 186408234302acdc1b8e621373834ec2 337 Gene3D G3DSA:1.10.1040.10 194 298 1.8E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS29785 186408234302acdc1b8e621373834ec2 337 SUPERFAMILY SSF51735 3 190 3.64E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29785 186408234302acdc1b8e621373834ec2 337 Gene3D G3DSA:3.40.50.720 1 193 4.4E-41 T 28-03-2018 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.2E-40 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 7.9E-92 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 Pfam PF07650 KH domain 39 110 2.7E-20 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 SUPERFAMILY SSF54814 2 106 1.54E-36 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 Gene3D G3DSA:3.30.1140.32 108 207 1.0E-37 T 28-03-2018 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.491 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 SUPERFAMILY SSF54821 108 206 1.11E-39 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 SMART SM00322 60 125 2.7E-7 T 28-03-2018 IPR004087 K Homology domain GO:0003676 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19730 730e76c0cf123655e2b490103f073b69 263 Gene3D G3DSA:3.30.300.20 17 107 2.6E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS06040 63257fe1a538acb9efb86c8d9f8d7c80 391 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 371 2.0E-113 T 28-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AL504_RS06040 63257fe1a538acb9efb86c8d9f8d7c80 391 SUPERFAMILY SSF52096 18 198 2.58E-61 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS06040 63257fe1a538acb9efb86c8d9f8d7c80 391 SUPERFAMILY SSF52096 281 357 2.58E-61 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS06040 63257fe1a538acb9efb86c8d9f8d7c80 391 Gene3D G3DSA:3.90.226.10 5 365 3.1E-77 T 28-03-2018 AL504_RS04860 df6b09fa6e65fe7523d3a1629cc82c06 94 Gene3D G3DSA:1.10.10.10 56 88 2.6E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04860 df6b09fa6e65fe7523d3a1629cc82c06 94 Gene3D G3DSA:1.10.10.60 6 55 6.1E-9 T 28-03-2018 AL504_RS04860 df6b09fa6e65fe7523d3a1629cc82c06 94 SUPERFAMILY SSF47413 36 81 4.02E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS04860 df6b09fa6e65fe7523d3a1629cc82c06 94 SMART SM00530 35 89 2.4E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS04860 df6b09fa6e65fe7523d3a1629cc82c06 94 Pfam PF01381 Helix-turn-helix 36 78 4.5E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS07315 9442e486ac377216a66320dacb35534b 247 Pfam PF07702 UTRA domain 129 233 3.7E-11 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS07315 9442e486ac377216a66320dacb35534b 247 Gene3D G3DSA:1.10.10.10 7 79 7.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07315 9442e486ac377216a66320dacb35534b 247 SMART SM00866 102 238 3.6E-7 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS07315 9442e486ac377216a66320dacb35534b 247 SMART SM00345 18 77 1.7E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07315 9442e486ac377216a66320dacb35534b 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.0E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07315 9442e486ac377216a66320dacb35534b 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.0E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07315 9442e486ac377216a66320dacb35534b 247 SUPERFAMILY SSF64288 65 242 4.87E-22 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS07315 9442e486ac377216a66320dacb35534b 247 Gene3D G3DSA:3.40.1410.10 104 247 1.4E-17 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS07315 9442e486ac377216a66320dacb35534b 247 SUPERFAMILY SSF46785 9 79 9.98E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07315 9442e486ac377216a66320dacb35534b 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 3.1E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS20240 625df526bd05dbb55131517bc4a98657 104 SMART SM00834 1 42 3.3E-18 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AL504_RS20240 625df526bd05dbb55131517bc4a98657 104 Pfam PF09723 Zinc ribbon domain 1 41 3.2E-16 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AL504_RS20240 625df526bd05dbb55131517bc4a98657 104 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 7.5E-22 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AL504_RS15600 6315effc41977e4a5a508a63c7bef98b 130 Gene3D G3DSA:3.30.230.10 4 130 5.8E-51 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS15600 6315effc41977e4a5a508a63c7bef98b 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AL504_RS15600 6315effc41977e4a5a508a63c7bef98b 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.332 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AL504_RS15600 6315effc41977e4a5a508a63c7bef98b 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.1E-45 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AL504_RS15600 6315effc41977e4a5a508a63c7bef98b 130 SUPERFAMILY SSF54211 5 130 3.79E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1114 1145 3.5E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1022 1052 1.6E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 530 561 1.4E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 719 750 1.3E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 626 657 2.3E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1185 1215 6.1E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Gene3D G3DSA:2.160.20.20 689 1237 2.1E-6 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Gene3D G3DSA:2.160.20.20 358 577 3.9E-4 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF03797 Autotransporter beta-domain 1541 1795 3.6E-61 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 SUPERFAMILY SSF51126 825 992 5.65E-16 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 SUPERFAMILY SSF51126 1029 1231 5.65E-16 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 SUPERFAMILY SSF51126 506 811 3.45E-21 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Gene3D G3DSA:2.40.128.130 1473 1816 1.1E-61 T 28-03-2018 AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 SMART SM00869 1538 1806 3.6E-46 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1323 1816 2.3E-44 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 470 491 0.055 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 1024 1051 3.6E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 1256 1284 0.0039 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 1115 1144 2.9E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 627 656 4.4E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 1187 1214 5.8E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 531 560 5.0E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF12951 Passenger-associated-transport-repeat 721 749 2.0E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 SUPERFAMILY SSF103515 1482 1816 1.07E-65 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 SUPERFAMILY SSF51126 1241 1400 4.71E-9 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS23560 b259b21c09ec3d8429fd57513ad2dadc 1816 Pfam PF13018 Extended Signal Peptide of Type V secretion system 31 52 5.0E-7 T 28-03-2018 IPR024973 ESPR domain AL504_RS02365 656e9af25e9d5c23f6c523a6b85030e9 341 SUPERFAMILY SSF53659 16 337 6.91E-108 T 28-03-2018 AL504_RS02365 656e9af25e9d5c23f6c523a6b85030e9 341 Gene3D G3DSA:3.40.718.10 6 338 9.2E-124 T 28-03-2018 AL504_RS02365 656e9af25e9d5c23f6c523a6b85030e9 341 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 44 331 5.3E-100 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS02365 656e9af25e9d5c23f6c523a6b85030e9 341 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 17 334 1.6E-110 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS02365 656e9af25e9d5c23f6c523a6b85030e9 341 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 13 335 34.253 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00184 Neisseria sp. porin signature 56 81 2.1E-8 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00184 Neisseria sp. porin signature 156 173 2.1E-8 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00184 Neisseria sp. porin signature 322 346 2.1E-8 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 Gene3D G3DSA:2.40.160.10 8 368 4.9E-70 T 28-03-2018 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 SUPERFAMILY SSF56935 21 368 3.66E-73 T 28-03-2018 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 Pfam PF13609 Gram-negative porin 7 345 1.1E-58 T 28-03-2018 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 4.8E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 4.8E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 157 168 4.8E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 193 205 4.8E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS24605 0e48a777f7c6d5e7e02f57cbb5cdec93 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 325 342 4.8E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS03695 f849207bc6eec338a882501a83f7229a 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 317 4.3E-54 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03695 f849207bc6eec338a882501a83f7229a 326 Gene3D G3DSA:3.40.190.10 38 295 3.5E-10 T 28-03-2018 AL504_RS03695 f849207bc6eec338a882501a83f7229a 326 SUPERFAMILY SSF53850 45 283 1.49E-9 T 28-03-2018 AL504_RS03695 f849207bc6eec338a882501a83f7229a 326 PIRSF PIRSF017082 6 326 2.4E-62 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 Pfam PF02142 MGS-like domain 15 129 6.6E-28 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 SMART SM00798 135 461 3.7E-197 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 SUPERFAMILY SSF52335 3 198 1.26E-64 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 PIRSF PIRSF000414 1 529 1.3E-210 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 Gene3D G3DSA:3.40.140.20 232 375 7.3E-53 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 459 3.0E-115 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 529 43.526 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 529 1.1E-219 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 Gene3D G3DSA:3.40.140.20 376 519 2.2E-52 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 SMART SM00851 15 130 1.4E-56 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 Gene3D G3DSA:3.40.50.1380 1 197 5.4E-71 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS13730 34e236fabaaaa1a8bec5a517bda0059c 529 SUPERFAMILY SSF53927 224 529 1.1E-126 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL504_RS13405 0052e3bf4fdd9d4e44b2dcddacb3b4e6 185 Gene3D G3DSA:3.40.630.30 15 182 1.5E-29 T 28-03-2018 AL504_RS13405 0052e3bf4fdd9d4e44b2dcddacb3b4e6 185 SUPERFAMILY SSF55729 21 177 5.98E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS13405 0052e3bf4fdd9d4e44b2dcddacb3b4e6 185 Pfam PF13420 Acetyltransferase (GNAT) domain 24 168 3.0E-16 T 28-03-2018 AL504_RS11230 c1e921c2e64d9c09e9be40d82c51d166 309 Gene3D G3DSA:1.10.10.10 21 104 2.7E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11230 c1e921c2e64d9c09e9be40d82c51d166 309 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 25 305 4.3E-109 T 28-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AL504_RS11230 c1e921c2e64d9c09e9be40d82c51d166 309 Pfam PF07848 PaaX-like protein 22 91 2.2E-27 T 28-03-2018 IPR012906 PaaX-like, N-terminal AL504_RS11230 c1e921c2e64d9c09e9be40d82c51d166 309 Pfam PF08223 PaaX-like protein C-terminal domain 190 283 3.2E-28 T 28-03-2018 IPR013225 PaaX-like, C-terminal AL504_RS11230 c1e921c2e64d9c09e9be40d82c51d166 309 PIRSF PIRSF020623 2 308 2.5E-108 T 28-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AL504_RS05685 349ba5946b1bef343489298112249d18 573 Gene3D G3DSA:3.20.140.10 1 482 6.5E-76 T 28-03-2018 AL504_RS05685 349ba5946b1bef343489298112249d18 573 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 197 499 1.6E-37 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL504_RS05685 349ba5946b1bef343489298112249d18 573 SUPERFAMILY SSF51690 195 327 1.85E-30 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL504_RS05685 349ba5946b1bef343489298112249d18 573 SUPERFAMILY SSF51690 385 548 1.85E-30 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 SUPERFAMILY SSF53822 70 338 2.52E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 28-03-2018 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 SMART SM00354 9 79 1.5E-24 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 9.5E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 Gene3D G3DSA:3.40.50.2300 185 317 2.3E-46 T 28-03-2018 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 Gene3D G3DSA:3.40.50.2300 63 184 1.0E-27 T 28-03-2018 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 Pfam PF13377 Periplasmic binding protein-like domain 178 335 1.3E-38 T 28-03-2018 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 Gene3D G3DSA:1.10.10.10 4 23 0.0033 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 11 21 4.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 21 31 4.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 SUPERFAMILY SSF47413 10 67 1.3E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS26945 7be3f42b00758bc5fc03922566c2862e 339 Gene3D G3DSA:1.10.260.40 24 62 6.9E-23 T 28-03-2018 AL504_RS28690 961578e4555cf03021a083e7cefa3b23 281 PIRSF PIRSF006157 23 281 1.0E-89 T 28-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AL504_RS28690 961578e4555cf03021a083e7cefa3b23 281 Gene3D G3DSA:3.40.830.10 22 280 4.8E-83 T 28-03-2018 AL504_RS28690 961578e4555cf03021a083e7cefa3b23 281 SUPERFAMILY SSF53213 26 280 1.57E-85 T 28-03-2018 AL504_RS28690 961578e4555cf03021a083e7cefa3b23 281 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 29 280 5.6E-53 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AL504_RS24160 a2d729591ac4da01237a678f8905c186 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 325 3.6E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS24160 a2d729591ac4da01237a678f8905c186 327 SUPERFAMILY SSF161098 96 308 2.88E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS24160 a2d729591ac4da01237a678f8905c186 327 Gene3D G3DSA:1.10.3720.10 1 314 2.3E-44 T 28-03-2018 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 Gene3D G3DSA:3.40.190.10 179 266 1.7E-20 T 28-03-2018 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.8E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 Gene3D G3DSA:3.40.190.10 92 178 1.8E-18 T 28-03-2018 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 SUPERFAMILY SSF53850 91 296 1.29E-34 T 28-03-2018 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 Gene3D G3DSA:1.10.10.10 1 91 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 SUPERFAMILY SSF46785 1 83 8.71E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27415 a1315b5e391f25793e9e6bed578093ef 317 Pfam PF03466 LysR substrate binding domain 89 292 3.5E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26970 9999c7fe20e9cc359fc9ab17d0df80a4 338 Gene3D G3DSA:3.40.50.2300 32 137 5.2E-19 T 28-03-2018 AL504_RS26970 9999c7fe20e9cc359fc9ab17d0df80a4 338 Pfam PF13407 Periplasmic binding protein domain 35 291 1.5E-64 T 28-03-2018 IPR025997 Periplasmic binding protein AL504_RS26970 9999c7fe20e9cc359fc9ab17d0df80a4 338 Gene3D G3DSA:3.40.50.2300 138 332 1.3E-39 T 28-03-2018 AL504_RS26970 9999c7fe20e9cc359fc9ab17d0df80a4 338 SUPERFAMILY SSF53822 32 322 1.45E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS26970 9999c7fe20e9cc359fc9ab17d0df80a4 338 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 34 335 7.8E-135 T 28-03-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 SMART SM00967 6 82 2.8E-16 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 Gene3D G3DSA:3.40.1280.10 78 244 4.8E-46 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 243 1.1E-72 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 244 44.118 T 28-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 80 3.0E-15 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 Gene3D G3DSA:3.30.1330.30 1 77 8.2E-16 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 SUPERFAMILY SSF55315 3 77 3.41E-17 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 SUPERFAMILY SSF75217 84 244 8.5E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL504_RS10170 bb854b94bc1a408a7b1f9ccf8c0e13e7 245 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.1E-39 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL504_RS10685 7e46a3b8f21ef7015fd784da5773d6b9 232 Pfam PF03741 Integral membrane protein TerC family 14 183 3.9E-44 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL504_RS10685 7e46a3b8f21ef7015fd784da5773d6b9 232 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 11 185 8.7E-68 T 28-03-2018 IPR022301 Integral membrane protein YjbE AL504_RS26320 e69630963e668d5d7b9de9cbe3f465b1 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 3.9E-33 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL504_RS26320 e69630963e668d5d7b9de9cbe3f465b1 108 Gene3D G3DSA:3.30.1310.10 1 108 6.7E-43 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL504_RS26320 e69630963e668d5d7b9de9cbe3f465b1 108 PIRSF PIRSF004555 2 108 3.0E-38 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL504_RS26320 e69630963e668d5d7b9de9cbe3f465b1 108 SUPERFAMILY SSF82607 10 102 3.27E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL504_RS26320 e69630963e668d5d7b9de9cbe3f465b1 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 22.736 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL504_RS26320 e69630963e668d5d7b9de9cbe3f465b1 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 1.3E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL504_RS00015 f3d30dbc1f81bd56134e039b0fc896e9 261 Gene3D G3DSA:1.20.58.430 29 245 4.4E-48 T 28-03-2018 AL504_RS00015 f3d30dbc1f81bd56134e039b0fc896e9 261 SUPERFAMILY SSF101082 29 235 7.98E-36 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain AL504_RS00015 f3d30dbc1f81bd56134e039b0fc896e9 261 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 12 245 1.4E-62 T 28-03-2018 IPR014147 Type IV conjugative transfer protein TrbJ AL504_RS25785 8e7e5c6ede69ed9c1e1e33cf3fe9f09c 563 Pfam PF01740 STAS domain 438 546 8.8E-13 T 28-03-2018 IPR002645 STAS domain AL504_RS25785 8e7e5c6ede69ed9c1e1e33cf3fe9f09c 563 Gene3D G3DSA:3.30.750.24 416 555 4.6E-25 T 28-03-2018 IPR002645 STAS domain AL504_RS25785 8e7e5c6ede69ed9c1e1e33cf3fe9f09c 563 Pfam PF00916 Sulfate permease family 23 381 2.8E-79 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL504_RS25785 8e7e5c6ede69ed9c1e1e33cf3fe9f09c 563 SUPERFAMILY SSF52091 437 551 6.47E-15 T 28-03-2018 IPR002645 STAS domain AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 Gene3D G3DSA:3.40.190.80 150 261 3.8E-30 T 28-03-2018 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 SUPERFAMILY SSF56655 1 258 1.57E-81 T 28-03-2018 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 Pfam PF00459 Inositol monophosphatase family 2 249 3.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 7.8E-17 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR01959 SuhB family inositol monophosphatase signature 196 208 7.8E-17 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.8E-17 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 7.7E-56 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 7.7E-56 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 7.7E-56 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 7.7E-56 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 7.7E-56 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 7.7E-56 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 Gene3D G3DSA:3.30.540.10 1 149 2.5E-49 T 28-03-2018 AL504_RS28005 ad72d4b6835cff0f0ed2bc3cc9fe3744 261 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AL504_RS31155 3e96a6b4dc1bb02befd259f83ec54415 305 Gene3D G3DSA:1.10.10.10 1 84 7.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31155 3e96a6b4dc1bb02befd259f83ec54415 305 Gene3D G3DSA:3.40.190.10 175 264 1.2E-26 T 28-03-2018 AL504_RS31155 3e96a6b4dc1bb02befd259f83ec54415 305 Gene3D G3DSA:3.40.190.10 88 174 3.5E-11 T 28-03-2018 AL504_RS31155 3e96a6b4dc1bb02befd259f83ec54415 305 SUPERFAMILY SSF53850 91 299 8.51E-36 T 28-03-2018 AL504_RS31155 3e96a6b4dc1bb02befd259f83ec54415 305 Pfam PF03466 LysR substrate binding domain 90 294 7.3E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS31155 3e96a6b4dc1bb02befd259f83ec54415 305 SUPERFAMILY SSF46785 2 111 3.64E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31155 3e96a6b4dc1bb02befd259f83ec54415 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 Pfam PF13840 ACT domain 346 409 1.3E-12 T 28-03-2018 IPR027795 GATS-like ACT domain AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 SUPERFAMILY SSF55021 257 335 6.65E-17 T 28-03-2018 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 SUPERFAMILY SSF53633 4 250 4.58E-73 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 Gene3D G3DSA:3.30.70.260 336 412 1.4E-19 T 28-03-2018 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 Gene3D G3DSA:3.30.70.260 247 335 4.6E-22 T 28-03-2018 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 412 1.4E-122 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 SUPERFAMILY SSF55021 340 414 2.55E-22 T 28-03-2018 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 PIRSF PIRSF000726 1 62 2.2E-20 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 PIRSF PIRSF000726 58 420 6.1E-132 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 Pfam PF00696 Amino acid kinase family 3 229 4.7E-48 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 9.8E-109 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 Pfam PF01842 ACT domain 276 333 9.5E-9 T 28-03-2018 IPR002912 ACT domain AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 1.2E-5 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.2E-5 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL504_RS28115 f24a0352b5c80d7d8b386b6ad10a0296 421 Gene3D G3DSA:3.40.1160.10 1 246 5.9E-74 T 28-03-2018 AL504_RS22895 eea4fe532fd47b0a97e8ee4901fe1896 403 Gene3D G3DSA:1.10.287.70 130 229 1.6E-17 T 28-03-2018 AL504_RS22895 eea4fe532fd47b0a97e8ee4901fe1896 403 Pfam PF02254 TrkA-N domain 251 365 6.6E-17 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL504_RS22895 eea4fe532fd47b0a97e8ee4901fe1896 403 Pfam PF07885 Ion channel 155 226 2.0E-15 T 28-03-2018 IPR013099 Potassium channel domain AL504_RS22895 eea4fe532fd47b0a97e8ee4901fe1896 403 SUPERFAMILY SSF51735 248 380 2.36E-20 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS22895 eea4fe532fd47b0a97e8ee4901fe1896 403 SUPERFAMILY SSF81324 129 270 4.84E-23 T 28-03-2018 AL504_RS22895 eea4fe532fd47b0a97e8ee4901fe1896 403 Gene3D G3DSA:3.40.50.720 241 365 1.5E-16 T 28-03-2018 AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 Gene3D G3DSA:1.10.10.10 4 91 1.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 Gene3D G3DSA:3.90.1150.10 386 503 2.6E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 SUPERFAMILY SSF46785 23 94 1.41E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 90 7.7E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 SMART SM00345 31 90 1.3E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 SUPERFAMILY SSF53383 120 501 3.39E-77 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 Pfam PF00155 Aminotransferase class I and II 201 486 4.7E-16 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 3.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 3.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02445 736d3ee90b01395fa3afc785af769d8a 507 Gene3D G3DSA:3.40.640.10 183 385 9.6E-28 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS25070 64f2030703e71439686e102d1b07d34f 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 1.1E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS25070 64f2030703e71439686e102d1b07d34f 226 SUPERFAMILY SSF161098 13 201 3.66E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS25070 64f2030703e71439686e102d1b07d34f 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 2.4E-29 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS25070 64f2030703e71439686e102d1b07d34f 226 Gene3D G3DSA:1.10.3720.10 8 218 3.7E-35 T 28-03-2018 AL504_RS19410 7615fcb61bb4bad8b8e8a766eaa68b27 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 1.2E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS19410 7615fcb61bb4bad8b8e8a766eaa68b27 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 326 1.7E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS19410 7615fcb61bb4bad8b8e8a766eaa68b27 334 SMART SM00382 43 242 6.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19410 7615fcb61bb4bad8b8e8a766eaa68b27 334 Pfam PF00005 ABC transporter 35 192 5.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19410 7615fcb61bb4bad8b8e8a766eaa68b27 334 SUPERFAMILY SSF52540 14 263 1.07E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19410 7615fcb61bb4bad8b8e8a766eaa68b27 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19410 7615fcb61bb4bad8b8e8a766eaa68b27 334 Gene3D G3DSA:3.40.50.300 12 332 1.3E-69 T 28-03-2018 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 SUPERFAMILY SSF53850 85 292 2.48E-18 T 28-03-2018 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 SUPERFAMILY SSF46785 1 87 2.18E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 Gene3D G3DSA:3.40.190.10 176 257 6.4E-13 T 28-03-2018 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 Gene3D G3DSA:3.40.190.10 92 175 1.4E-5 T 28-03-2018 AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 Pfam PF03466 LysR substrate binding domain 88 288 2.4E-17 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26405 18e9f096563099682390b32cb6dd2e61 302 Gene3D G3DSA:1.10.10.10 1 91 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SMART SM00086 334 374 0.0075 T 28-03-2018 IPR001610 PAC motif AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Gene3D G3DSA:3.30.450.20 261 384 2.4E-20 T 28-03-2018 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SUPERFAMILY SSF55785 252 372 2.79E-17 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SMART SM00421 419 476 1.9E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Gene3D G3DSA:1.10.10.10 385 486 1.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Gene3D G3DSA:3.30.450.20 138 260 1.3E-19 T 28-03-2018 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Gene3D G3DSA:3.30.450.20 2 137 4.5E-8 T 28-03-2018 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 260 7.5E-11 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 261 381 1.2E-10 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Pfam PF13426 PAS domain 24 133 0.0028 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Pfam PF13426 PAS domain 276 373 2.1E-5 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Pfam PF13426 PAS domain 159 250 6.9E-6 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 Pfam PF00196 Bacterial regulatory proteins, luxR family 421 476 1.1E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SUPERFAMILY SSF46894 411 482 3.74E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SUPERFAMILY SSF55785 9 62 6.09E-6 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SUPERFAMILY SSF55785 160 262 3.49E-14 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 452 464 7.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 422 436 7.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 436 452 7.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SMART SM00091 265 331 0.2 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SMART SM00091 13 82 9.2 T 28-03-2018 IPR000014 PAS domain AL504_RS25520 e666055e89c8f8d183534a338b19d6ed 496 SMART SM00091 140 210 0.12 T 28-03-2018 IPR000014 PAS domain AL504_RS02785 2f646cf1e5fff3cea90bb5641f21aa65 270 Gene3D G3DSA:3.40.50.300 5 225 1.6E-55 T 28-03-2018 AL504_RS02785 2f646cf1e5fff3cea90bb5641f21aa65 270 SUPERFAMILY SSF52540 9 236 1.25E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS02785 2f646cf1e5fff3cea90bb5641f21aa65 270 SMART SM00382 35 218 1.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS02785 2f646cf1e5fff3cea90bb5641f21aa65 270 Pfam PF00005 ABC transporter 27 168 9.8E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 SUPERFAMILY SSF48179 167 275 1.17E-32 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 PIRSF PIRSF000193 4 274 2.5E-69 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 Gene3D G3DSA:3.40.50.720 1 164 1.9E-27 T 28-03-2018 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 99 2.9E-14 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 226 249 - T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 271 4.1E-74 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 271 25.418 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 Gene3D G3DSA:1.10.3730.10 165 276 7.3E-37 T 28-03-2018 AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 SUPERFAMILY SSF51735 7 164 4.31E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04605 a16ad80df7a5364edbcde68c73fde90d 277 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 169 271 4.9E-33 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL504_RS25840 1fa1c9ba6c362c085b272dcbf3b29b7b 204 SUPERFAMILY SSF52833 1 86 1.25E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25840 1fa1c9ba6c362c085b272dcbf3b29b7b 204 Gene3D G3DSA:1.20.1050.10 112 204 4.2E-11 T 28-03-2018 AL504_RS25840 1fa1c9ba6c362c085b272dcbf3b29b7b 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 76 3.6E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS25840 1fa1c9ba6c362c085b272dcbf3b29b7b 204 Pfam PF13410 Glutathione S-transferase, C-terminal domain 136 170 1.8E-6 T 28-03-2018 AL504_RS25840 1fa1c9ba6c362c085b272dcbf3b29b7b 204 Gene3D G3DSA:3.40.30.10 2 111 8.7E-26 T 28-03-2018 AL504_RS25840 1fa1c9ba6c362c085b272dcbf3b29b7b 204 SUPERFAMILY SSF47616 86 198 3.13E-15 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS06540 f0d049b5b2f5fd976c367fdd70541bf9 289 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site AL504_RS06540 f0d049b5b2f5fd976c367fdd70541bf9 289 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 282 1.5E-118 T 28-03-2018 IPR022522 Flagellar motor stator, MotA AL504_RS06540 f0d049b5b2f5fd976c367fdd70541bf9 289 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 238 9.5E-11 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 SUPERFAMILY SSF50249 12 153 2.57E-43 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 SUPERFAMILY SSF55681 160 504 1.26E-115 T 28-03-2018 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 388 404 1.3E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 260 277 1.3E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 242 255 1.3E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 213 229 1.3E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 197 207 1.3E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 Gene3D G3DSA:2.40.50.140 14 153 1.6E-39 T 28-03-2018 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 Pfam PF01336 OB-fold nucleic acid binding domain 67 141 4.9E-16 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 Gene3D G3DSA:3.30.930.10 154 503 2.4E-98 T 28-03-2018 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 Pfam PF00152 tRNA synthetases class II (D, K and N) 160 503 2.9E-82 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 506 43.556 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS31390 8fc2be667904b23ae4d93cead61a5bf5 507 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 505 2.5E-192 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS29465 b6e5e0b03e4864b9357a6862d0fd1b9d 364 SUPERFAMILY SSF53850 137 244 1.01E-6 T 28-03-2018 AL504_RS29465 b6e5e0b03e4864b9357a6862d0fd1b9d 364 Gene3D G3DSA:3.40.190.10 157 290 0.0066 T 28-03-2018 AL504_RS29465 b6e5e0b03e4864b9357a6862d0fd1b9d 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 56 317 1.3E-32 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS21480 b7d25cc780abba978e678b6e078e8c09 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 322 3.1E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21480 b7d25cc780abba978e678b6e078e8c09 327 PIRSF PIRSF017082 2 325 4.7E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21480 b7d25cc780abba978e678b6e078e8c09 327 SUPERFAMILY SSF53850 113 285 2.86E-14 T 28-03-2018 AL504_RS21480 b7d25cc780abba978e678b6e078e8c09 327 Gene3D G3DSA:3.40.190.10 125 236 1.4E-11 T 28-03-2018 AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SMART SM00267 266 437 6.4E-70 T 28-03-2018 IPR000160 GGDEF domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Pfam PF08448 PAS fold 157 266 4.7E-7 T 28-03-2018 IPR013656 PAS fold-4 AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SUPERFAMILY SSF55073 282 439 5.3E-52 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SMART SM00052 447 689 9.9E-105 T 28-03-2018 IPR001633 EAL domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Pfam PF13426 PAS domain 21 123 3.0E-13 T 28-03-2018 IPR000014 PAS domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Gene3D G3DSA:3.30.70.270 276 444 4.0E-67 T 28-03-2018 AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SUPERFAMILY SSF141868 454 688 3.4E-84 T 28-03-2018 IPR001633 EAL domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SUPERFAMILY SSF55785 18 123 1.05E-21 T 28-03-2018 IPR000014 PAS domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Gene3D G3DSA:3.30.450.20 146 275 8.9E-15 T 28-03-2018 AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 277 432 4.5E-52 T 28-03-2018 IPR000160 GGDEF domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SUPERFAMILY SSF55785 142 264 1.3E-10 T 28-03-2018 IPR000014 PAS domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Pfam PF00563 EAL domain 454 684 1.5E-70 T 28-03-2018 IPR001633 EAL domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 271 1.7E-6 T 28-03-2018 IPR000014 PAS domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 128 2.9E-15 T 28-03-2018 IPR000014 PAS domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SMART SM00091 8 77 2.0 T 28-03-2018 IPR000014 PAS domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 SMART SM00091 150 217 1.0E-5 T 28-03-2018 IPR000014 PAS domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 275 435 8.1E-45 T 28-03-2018 IPR000160 GGDEF domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Gene3D G3DSA:3.20.20.450 445 689 2.5E-93 T 28-03-2018 IPR001633 EAL domain AL504_RS17605 9eb93746c6734e47705e7fed1a97da24 693 Gene3D G3DSA:3.30.450.20 3 145 4.8E-23 T 28-03-2018 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 SMART SM00649 9 141 4.5E-85 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 Gene3D G3DSA:1.10.10.250 73 141 2.9E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.557 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 SUPERFAMILY SSF46906 68 141 1.83E-26 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.7E-29 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 SUPERFAMILY SSF54747 3 73 2.22E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.2E-64 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 28-03-2018 AL504_RS19615 d50136e4dd21551faf0c4b1cad73d016 143 Gene3D G3DSA:3.30.1550.10 3 72 9.5E-34 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL504_RS26845 a09ac7f88151a078a69eea336217c21c 220 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 16 175 22.949 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL504_RS26845 a09ac7f88151a078a69eea336217c21c 220 Pfam PF04390 Lipopolysaccharide-assembly 43 170 9.8E-9 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL504_RS26845 a09ac7f88151a078a69eea336217c21c 220 Gene3D G3DSA:3.30.160.150 31 185 7.5E-39 T 28-03-2018 AL504_RS15460 8a99687fc9652a968e4b92d584c8d209 147 SUPERFAMILY SSF69635 6 136 1.61E-17 T 28-03-2018 AL504_RS15460 8a99687fc9652a968e4b92d584c8d209 147 Gene3D G3DSA:3.30.1460.10 4 137 1.4E-22 T 28-03-2018 AL504_RS15460 8a99687fc9652a968e4b92d584c8d209 147 Pfam PF05932 Tir chaperone protein (CesT) family 8 122 4.6E-15 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 19 403 6.4E-172 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 SUPERFAMILY SSF56059 119 325 9.19E-56 T 28-03-2018 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 Gene3D G3DSA:3.30.470.20 204 402 3.6E-39 T 28-03-2018 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 SUPERFAMILY SSF52440 8 118 2.88E-31 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 Pfam PF01370 NAD dependent epimerase/dehydratase family 24 86 5.3E-5 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 SUPERFAMILY SSF51246 331 402 9.73E-17 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 Gene3D G3DSA:3.40.50.20 19 118 5.3E-20 T 28-03-2018 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 Gene3D G3DSA:3.30.1490.20 135 203 1.2E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 Pfam PF02222 ATP-grasp domain 129 306 9.5E-52 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL504_RS21145 92ffd9dc6a5eaaebbb5cd011d1066eb8 405 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 13 403 50.66 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL504_RS00370 17c4ee1139a39bdb46e325af403df25a 474 Pfam PF00355 Rieske [2Fe-2S] domain 50 131 1.3E-15 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS00370 17c4ee1139a39bdb46e325af403df25a 474 SUPERFAMILY SSF50022 43 159 1.31E-32 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS00370 17c4ee1139a39bdb46e325af403df25a 474 SUPERFAMILY SSF55961 151 414 6.12E-29 T 28-03-2018 AL504_RS00370 17c4ee1139a39bdb46e325af403df25a 474 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 91 113 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AL504_RS00370 17c4ee1139a39bdb46e325af403df25a 474 Gene3D G3DSA:3.90.380.10 152 394 4.0E-35 T 28-03-2018 AL504_RS00370 17c4ee1139a39bdb46e325af403df25a 474 Gene3D G3DSA:2.102.10.10 47 151 1.5E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS16625 54ffe24634459bf754190808b483dfa7 335 SUPERFAMILY SSF89733 3 331 6.41E-104 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS16625 54ffe24634459bf754190808b483dfa7 335 Gene3D G3DSA:3.30.1370.60 78 289 1.0E-79 T 28-03-2018 AL504_RS16625 54ffe24634459bf754190808b483dfa7 335 Gene3D G3DSA:1.10.1530.10 2 77 1.3E-20 T 28-03-2018 AL504_RS16625 54ffe24634459bf754190808b483dfa7 335 Gene3D G3DSA:1.10.1530.10 290 322 0.11 T 28-03-2018 AL504_RS16625 54ffe24634459bf754190808b483dfa7 335 Pfam PF02615 Malate/L-lactate dehydrogenase 6 328 2.9E-105 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 Gene3D G3DSA:3.40.430.10 40 161 7.2E-42 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 Gene3D G3DSA:3.40.430.10 1 39 7.9E-13 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 PRINTS PR00070 Dihydrofolate reductase signature 43 54 2.4E-16 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 PRINTS PR00070 Dihydrofolate reductase signature 16 26 2.4E-16 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 PRINTS PR00070 Dihydrofolate reductase signature 94 108 2.4E-16 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 PRINTS PR00070 Dihydrofolate reductase signature 30 38 2.4E-16 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 Pfam PF00186 Dihydrofolate reductase 5 160 2.5E-57 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 PIRSF PIRSF000194 1 161 3.0E-60 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AL504_RS23070 83fcd228fb6e32f45dc3db31878c59db 161 SUPERFAMILY SSF53597 4 160 1.25E-55 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS05500 10ac0aa9f8ef076dab6840b49c3c04a3 322 Gene3D G3DSA:2.40.50.100 41 102 9.5E-7 T 28-03-2018 AL504_RS05500 10ac0aa9f8ef076dab6840b49c3c04a3 322 SUPERFAMILY SSF111369 143 272 2.48E-5 T 28-03-2018 AL504_RS05500 10ac0aa9f8ef076dab6840b49c3c04a3 322 Pfam PF13437 HlyD family secretion protein 203 314 9.9E-17 T 28-03-2018 AL504_RS05500 10ac0aa9f8ef076dab6840b49c3c04a3 322 Gene3D G3DSA:1.20.1600.10 173 281 2.2E-6 T 28-03-2018 AL504_RS10620 0538fdec1462d9912cdad3ae7df5aa87 230 SUPERFAMILY SSF52540 2 224 2.15E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10620 0538fdec1462d9912cdad3ae7df5aa87 230 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS10620 0538fdec1462d9912cdad3ae7df5aa87 230 Gene3D G3DSA:3.40.50.300 1 228 4.3E-54 T 28-03-2018 AL504_RS10620 0538fdec1462d9912cdad3ae7df5aa87 230 SMART SM00382 26 207 4.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS10620 0538fdec1462d9912cdad3ae7df5aa87 230 Pfam PF00005 ABC transporter 17 158 5.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21970 88b4daeceb8017243cd3b00fc8fbfe9e 270 Gene3D G3DSA:3.40.50.10860 1 118 2.7E-30 T 28-03-2018 AL504_RS21970 88b4daeceb8017243cd3b00fc8fbfe9e 270 Gene3D G3DSA:3.40.50.720 119 269 4.2E-24 T 28-03-2018 AL504_RS21970 88b4daeceb8017243cd3b00fc8fbfe9e 270 SUPERFAMILY SSF51735 108 251 3.71E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21970 88b4daeceb8017243cd3b00fc8fbfe9e 270 SUPERFAMILY SSF53223 3 106 6.33E-25 T 28-03-2018 AL504_RS21970 88b4daeceb8017243cd3b00fc8fbfe9e 270 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 13 95 1.3E-18 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL504_RS22380 e8181151d27446e3cb050ca5772f9d30 201 SUPERFAMILY SSF54621 30 162 3.79E-14 T 28-03-2018 IPR010495 Haem-binding HasA AL504_RS22380 e8181151d27446e3cb050ca5772f9d30 201 Gene3D G3DSA:3.30.1500.10 1 200 4.6E-37 T 28-03-2018 IPR010495 Haem-binding HasA AL504_RS22380 e8181151d27446e3cb050ca5772f9d30 201 Pfam PF06438 Heme-binding protein A (HasA) 38 196 6.7E-9 T 28-03-2018 IPR010495 Haem-binding HasA AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Gene3D G3DSA:3.30.70.20 235 288 6.2E-11 T 28-03-2018 AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Pfam PF13746 4Fe-4S dicluster domain 232 338 6.6E-43 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Pfam PF12801 4Fe-4S binding domain 108 150 7.0E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 285 296 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Gene3D G3DSA:3.30.70.20 289 303 0.077 T 28-03-2018 AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 SUPERFAMILY SSF54862 186 359 1.19E-33 T 28-03-2018 AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 SUPERFAMILY SSF54862 118 140 1.19E-33 T 28-03-2018 AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 309 320 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Gene3D G3DSA:2.60.40.10 373 494 5.2E-25 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Gene3D G3DSA:3.30.70.20 304 317 0.032 T 28-03-2018 AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 54 482 1.1E-149 T 28-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Gene3D G3DSA:1.10.1060.10 318 358 5.8E-4 T 28-03-2018 AL504_RS27240 8f962c54140dcde7afc59f950021f3c0 496 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 373 495 4.9E-25 T 28-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AL504_RS05515 088e6cf6ce31aa20b3be264eb9443689 491 Gene3D G3DSA:1.20.1600.10 24 483 5.9E-88 T 28-03-2018 AL504_RS05515 088e6cf6ce31aa20b3be264eb9443689 491 Pfam PF02321 Outer membrane efflux protein 74 267 1.4E-14 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS05515 088e6cf6ce31aa20b3be264eb9443689 491 Pfam PF02321 Outer membrane efflux protein 300 475 3.5E-31 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS05515 088e6cf6ce31aa20b3be264eb9443689 491 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 477 2.5E-114 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS05515 088e6cf6ce31aa20b3be264eb9443689 491 SUPERFAMILY SSF56954 4 37 5.1E-98 T 28-03-2018 AL504_RS05515 088e6cf6ce31aa20b3be264eb9443689 491 SUPERFAMILY SSF56954 65 480 5.1E-98 T 28-03-2018 AL504_RS13560 48f13853e12a467aa928f86e7f66e62d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 1.4E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS13560 48f13853e12a467aa928f86e7f66e62d 301 Gene3D G3DSA:1.10.10.10 1 78 1.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13560 48f13853e12a467aa928f86e7f66e62d 301 Gene3D G3DSA:3.40.190.10 170 257 1.3E-30 T 28-03-2018 AL504_RS13560 48f13853e12a467aa928f86e7f66e62d 301 SUPERFAMILY SSF46785 1 78 8.33E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13560 48f13853e12a467aa928f86e7f66e62d 301 Gene3D G3DSA:3.40.190.10 82 169 7.2E-15 T 28-03-2018 AL504_RS13560 48f13853e12a467aa928f86e7f66e62d 301 Pfam PF03466 LysR substrate binding domain 82 286 1.4E-52 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS13560 48f13853e12a467aa928f86e7f66e62d 301 SUPERFAMILY SSF53850 84 289 4.89E-54 T 28-03-2018 AL504_RS16865 15233063201201944f9d0c368ace0bab 310 SMART SM00342 222 305 3.7E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS16865 15233063201201944f9d0c368ace0bab 310 SUPERFAMILY SSF46689 205 252 4.0E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16865 15233063201201944f9d0c368ace0bab 310 Gene3D G3DSA:1.10.10.60 259 310 1.5E-6 T 28-03-2018 AL504_RS16865 15233063201201944f9d0c368ace0bab 310 Gene3D G3DSA:1.10.10.60 206 258 1.4E-14 T 28-03-2018 AL504_RS16865 15233063201201944f9d0c368ace0bab 310 SUPERFAMILY SSF52317 1 187 3.88E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS16865 15233063201201944f9d0c368ace0bab 310 Pfam PF01965 DJ-1/PfpI family 4 167 1.9E-15 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS16865 15233063201201944f9d0c368ace0bab 310 SUPERFAMILY SSF46689 258 306 8.06E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16865 15233063201201944f9d0c368ace0bab 310 Pfam PF12833 Helix-turn-helix domain 228 306 3.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS16865 15233063201201944f9d0c368ace0bab 310 Gene3D G3DSA:3.40.50.880 1 205 3.0E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.1E-41 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 Gene3D G3DSA:3.50.50.60 115 240 1.7E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 7.4E-17 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 7.4E-17 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 7.4E-17 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.4E-17 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 SUPERFAMILY SSF51905 1 56 9.72E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 SUPERFAMILY SSF51905 103 191 9.72E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 SUPERFAMILY SSF51905 219 361 9.72E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 SUPERFAMILY SSF55424 346 460 1.44E-21 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 8.5E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 Gene3D G3DSA:3.30.390.30 348 469 2.8E-20 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 Gene3D G3DSA:1.10.287.990 37 106 1.7E-16 T 28-03-2018 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 453 2.8E-13 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 Gene3D G3DSA:3.50.50.60 241 336 4.2E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05125 af511db44be43c379c25cad428a214ee 478 PIRSF PIRSF000350 2 460 3.8E-58 T 28-03-2018 AL504_RS14060 e8a5318ec65ad81d33527f9ed088987a 394 Gene3D G3DSA:1.20.1600.10 24 372 1.9E-30 T 28-03-2018 AL504_RS14060 e8a5318ec65ad81d33527f9ed088987a 394 SUPERFAMILY SSF111369 55 260 6.67E-21 T 28-03-2018 AL504_RS14060 e8a5318ec65ad81d33527f9ed088987a 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 268 6.7E-12 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS14060 e8a5318ec65ad81d33527f9ed088987a 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 383 3.4E-45 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS05170 c2b9928e9b41218c75ba8b5d0f547bb0 284 Gene3D G3DSA:2.70.70.10 121 284 7.0E-37 T 28-03-2018 AL504_RS05170 c2b9928e9b41218c75ba8b5d0f547bb0 284 SUPERFAMILY SSF51261 65 281 3.56E-48 T 28-03-2018 IPR011055 Duplicated hybrid motif AL504_RS05170 c2b9928e9b41218c75ba8b5d0f547bb0 284 Pfam PF01476 LysM domain 65 106 2.1E-14 T 28-03-2018 IPR018392 LysM domain AL504_RS05170 c2b9928e9b41218c75ba8b5d0f547bb0 284 Pfam PF01551 Peptidase family M23 183 277 5.7E-30 T 28-03-2018 IPR016047 Peptidase M23 AL504_RS05170 c2b9928e9b41218c75ba8b5d0f547bb0 284 Gene3D G3DSA:3.10.350.10 59 112 1.7E-16 T 28-03-2018 AL504_RS05170 c2b9928e9b41218c75ba8b5d0f547bb0 284 SMART SM00257 64 108 1.4E-15 T 28-03-2018 IPR018392 LysM domain AL504_RS00765 88101b6449de65b520d7f9bd9e70778f 159 Gene3D G3DSA:1.20.1290.10 1 150 3.0E-43 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00765 88101b6449de65b520d7f9bd9e70778f 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 1.5E-14 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS00765 88101b6449de65b520d7f9bd9e70778f 159 SUPERFAMILY SSF69118 4 145 1.26E-46 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00765 88101b6449de65b520d7f9bd9e70778f 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 94 8.7E-19 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 Pfam PF13533 Biotin-lipoyl like 79 124 6.4E-9 T 28-03-2018 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 181 412 1.5E-62 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 Gene3D G3DSA:3.90.1170.30 43 119 6.9E-7 T 28-03-2018 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 329 1.3E-40 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 69 1.3E-40 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 391 411 1.3E-40 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 376 391 1.3E-40 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 272 293 1.3E-40 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 352 1.3E-40 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 1.3E-40 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 SUPERFAMILY SSF51230 74 115 4.32E-5 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 Gene3D G3DSA:1.20.1600.10 120 392 6.7E-16 T 28-03-2018 AL504_RS14585 0c33c3dcd5cd575671f4890613119fd0 412 Pfam PF13437 HlyD family secretion protein 260 379 9.9E-19 T 28-03-2018 AL504_RS01650 bce53a46db0643f3e64150d71bc23d7a 398 SUPERFAMILY SSF103473 12 397 2.62E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01650 bce53a46db0643f3e64150d71bc23d7a 398 Gene3D G3DSA:1.20.1250.20 206 398 1.6E-8 T 28-03-2018 AL504_RS01650 bce53a46db0643f3e64150d71bc23d7a 398 Pfam PF07690 Major Facilitator Superfamily 47 234 3.8E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01650 bce53a46db0643f3e64150d71bc23d7a 398 Gene3D G3DSA:1.20.1250.20 9 205 7.3E-11 T 28-03-2018 AL504_RS09110 65fa11c197497b9def23867d62375d70 78 Gene3D G3DSA:2.30.30.100 5 74 1.6E-33 T 28-03-2018 AL504_RS09110 65fa11c197497b9def23867d62375d70 78 SUPERFAMILY SSF50182 8 70 3.47E-24 T 28-03-2018 IPR010920 LSM domain AL504_RS09110 65fa11c197497b9def23867d62375d70 78 Pfam PF17209 Hfq protein 8 69 1.9E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL504_RS09110 65fa11c197497b9def23867d62375d70 78 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 3.9E-29 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL504_RS09110 65fa11c197497b9def23867d62375d70 78 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 28.324 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL504_RS02050 a182af08083575a514b8e0a4bc3002ab 258 Gene3D G3DSA:3.20.20.60 1 255 1.2E-43 T 28-03-2018 AL504_RS02050 a182af08083575a514b8e0a4bc3002ab 258 SUPERFAMILY SSF51621 1 253 1.22E-77 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS02050 a182af08083575a514b8e0a4bc3002ab 258 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 242 9.4E-54 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL504_RS26820 eb113bbb102f84c5a8a7744e0046f383 177 SUPERFAMILY SSF55729 1 169 1.22E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS26820 eb113bbb102f84c5a8a7744e0046f383 177 Pfam PF13302 Acetyltransferase (GNAT) domain 2 140 5.9E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS26820 eb113bbb102f84c5a8a7744e0046f383 177 Gene3D G3DSA:3.40.630.30 1 175 5.4E-40 T 28-03-2018 AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 Pfam PF03466 LysR substrate binding domain 87 293 4.8E-18 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 Gene3D G3DSA:1.10.10.10 1 92 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 SUPERFAMILY SSF46785 1 82 8.62E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 Gene3D G3DSA:3.40.190.10 93 182 5.7E-13 T 28-03-2018 AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.1E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.1E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.1E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 SUPERFAMILY SSF53850 87 297 5.25E-22 T 28-03-2018 AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01695 104f5c3682f526dab11d5b0cb673c700 299 Gene3D G3DSA:3.40.190.10 183 262 1.5E-4 T 28-03-2018 AL504_RS28280 36e286ec1afbe8d486dd22cfc18d5714 254 SUPERFAMILY SSF46785 3 76 4.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28280 36e286ec1afbe8d486dd22cfc18d5714 254 SUPERFAMILY SSF55781 75 247 3.2E-52 T 28-03-2018 IPR029016 GAF domain-like AL504_RS28280 36e286ec1afbe8d486dd22cfc18d5714 254 Gene3D G3DSA:1.10.10.10 7 91 2.3E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28280 36e286ec1afbe8d486dd22cfc18d5714 254 Pfam PF01614 Bacterial transcriptional regulator 121 243 7.1E-30 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS28280 36e286ec1afbe8d486dd22cfc18d5714 254 Gene3D G3DSA:3.30.450.40 92 251 7.8E-53 T 28-03-2018 IPR029016 GAF domain-like AL504_RS28280 36e286ec1afbe8d486dd22cfc18d5714 254 SMART SM00346 2 93 2.5E-17 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS28280 36e286ec1afbe8d486dd22cfc18d5714 254 Pfam PF09339 IclR helix-turn-helix domain 5 55 8.2E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS19525 278e559219c8f15a896bbda164c47ff2 403 PIRSF PIRSF001434 1 387 1.6E-117 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS19525 278e559219c8f15a896bbda164c47ff2 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 17 384 1.1E-122 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL504_RS19525 278e559219c8f15a896bbda164c47ff2 403 Gene3D G3DSA:3.40.640.10 5 255 4.8E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS19525 278e559219c8f15a896bbda164c47ff2 403 Gene3D G3DSA:3.90.1150.10 256 387 6.6E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS19525 278e559219c8f15a896bbda164c47ff2 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 383 9.0E-97 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS19525 278e559219c8f15a896bbda164c47ff2 403 SUPERFAMILY SSF53383 20 384 7.31E-93 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS00160 12cb64e4646773d3b0d2ca4e36bd2c66 229 Pfam PF00005 ABC transporter 28 176 9.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS00160 12cb64e4646773d3b0d2ca4e36bd2c66 229 SUPERFAMILY SSF52540 9 227 7.23E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00160 12cb64e4646773d3b0d2ca4e36bd2c66 229 Gene3D G3DSA:3.40.50.300 4 229 3.0E-61 T 28-03-2018 AL504_RS00160 12cb64e4646773d3b0d2ca4e36bd2c66 229 SMART SM00382 37 225 1.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS00160 12cb64e4646773d3b0d2ca4e36bd2c66 229 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 Pfam PF00005 ABC transporter 332 485 6.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 Pfam PF00005 ABC transporter 24 181 4.5E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 SUPERFAMILY SSF52540 3 253 2.04E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 SMART SM00382 340 534 1.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 SMART SM00382 32 231 9.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 Gene3D G3DSA:3.40.50.300 302 574 1.6E-73 T 28-03-2018 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 Gene3D G3DSA:3.40.50.300 1 284 3.0E-70 T 28-03-2018 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 265 2.6E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 536 568 1.6E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS18460 4c798a8cfb6ab800a5003370ea6034d4 575 SUPERFAMILY SSF52540 323 555 1.7E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29315 f1f8469f4fbc4c70d105ade70db9ad65 232 Gene3D G3DSA:3.30.1150.10 106 218 6.8E-5 T 28-03-2018 AL504_RS29315 f1f8469f4fbc4c70d105ade70db9ad65 232 SUPERFAMILY SSF74653 114 205 1.44E-8 T 28-03-2018 AL504_RS29315 f1f8469f4fbc4c70d105ade70db9ad65 232 Pfam PF07660 Secretin and TonB N terminus short domain 64 111 6.3E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS29315 f1f8469f4fbc4c70d105ade70db9ad65 232 SMART SM00965 62 113 1.0E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 591 2.0E-39 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 Gene3D G3DSA:4.10.80.40 560 592 7.2E-18 T 28-03-2018 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 592 2.3E-280 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 Gene3D G3DSA:3.50.50.60 294 432 9.1E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 Gene3D G3DSA:3.50.50.60 6 293 6.2E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 Pfam PF00890 FAD binding domain 14 408 6.0E-118 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 SUPERFAMILY SSF56425 241 359 8.97E-43 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 SUPERFAMILY SSF46977 456 592 5.49E-45 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 1.1E-5 T 28-03-2018 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 393 1.1E-5 T 28-03-2018 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 SUPERFAMILY SSF51905 10 264 9.62E-79 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 SUPERFAMILY SSF51905 363 436 9.62E-79 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 Gene3D G3DSA:1.20.58.100 449 559 2.6E-34 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 591 1.0E-240 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS11760 63284f47f7bb80311bbf66ecca34a707 592 PIRSF PIRSF000171 6 582 9.1E-38 T 28-03-2018 AL504_RS26045 21e26f27e557aec10d192080ec35a94f 275 SUPERFAMILY SSF46785 32 101 7.21E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26045 21e26f27e557aec10d192080ec35a94f 275 SUPERFAMILY SSF55781 95 273 2.29E-49 T 28-03-2018 IPR029016 GAF domain-like AL504_RS26045 21e26f27e557aec10d192080ec35a94f 275 Gene3D G3DSA:1.10.10.10 30 89 4.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26045 21e26f27e557aec10d192080ec35a94f 275 SMART SM00346 30 118 1.6E-19 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS26045 21e26f27e557aec10d192080ec35a94f 275 Gene3D G3DSA:3.30.450.40 100 275 7.6E-52 T 28-03-2018 IPR029016 GAF domain-like AL504_RS26045 21e26f27e557aec10d192080ec35a94f 275 Pfam PF01614 Bacterial transcriptional regulator 150 269 2.9E-32 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS26045 21e26f27e557aec10d192080ec35a94f 275 Pfam PF09339 IclR helix-turn-helix domain 32 83 3.0E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS13240 a6d79c1d0b9bafb47b9c291de7bd8bb9 519 Gene3D G3DSA:3.10.105.10 301 487 5.0E-27 T 28-03-2018 AL504_RS13240 a6d79c1d0b9bafb47b9c291de7bd8bb9 519 SUPERFAMILY SSF53850 35 515 4.12E-97 T 28-03-2018 AL504_RS13240 a6d79c1d0b9bafb47b9c291de7bd8bb9 519 Gene3D G3DSA:3.90.76.10 56 162 6.7E-26 T 28-03-2018 AL504_RS13240 a6d79c1d0b9bafb47b9c291de7bd8bb9 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 424 3.8E-69 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS13240 a6d79c1d0b9bafb47b9c291de7bd8bb9 519 Gene3D G3DSA:3.40.190.10 163 300 2.5E-29 T 28-03-2018 AL504_RS13240 a6d79c1d0b9bafb47b9c291de7bd8bb9 519 PIRSF PIRSF002741 10 515 1.9E-65 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 Gene3D G3DSA:1.10.10.60 187 244 2.7E-11 T 28-03-2018 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 Gene3D G3DSA:1.10.10.60 245 293 7.9E-14 T 28-03-2018 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 8.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 8.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 SUPERFAMILY SSF46689 244 291 2.64E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 SUPERFAMILY SSF46689 191 242 1.03E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 Pfam PF12833 Helix-turn-helix domain 213 292 1.1E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS17675 6ead8550469c30a09a2a118e01e7439a 293 SMART SM00342 207 290 3.3E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS28270 cd99020aecd0178a0969f865b437d4f1 261 Pfam PF02146 Sir2 family 27 211 1.1E-49 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 AL504_RS28270 cd99020aecd0178a0969f865b437d4f1 261 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 20 257 56.207 T 28-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AL504_RS28270 cd99020aecd0178a0969f865b437d4f1 261 Gene3D G3DSA:3.40.50.1220 10 261 1.0E-68 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS28270 cd99020aecd0178a0969f865b437d4f1 261 SUPERFAMILY SSF52467 11 258 7.98E-81 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS23530 5a9d2fe329130e9ef29f14972543b9a9 177 SUPERFAMILY SSF88659 103 166 8.29E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23530 5a9d2fe329130e9ef29f14972543b9a9 177 Gene3D G3DSA:1.10.10.10 76 169 4.5E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23530 5a9d2fe329130e9ef29f14972543b9a9 177 Gene3D G3DSA:1.10.1740.10 7 75 1.3E-13 T 28-03-2018 AL504_RS23530 5a9d2fe329130e9ef29f14972543b9a9 177 SUPERFAMILY SSF88946 9 75 2.08E-11 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23530 5a9d2fe329130e9ef29f14972543b9a9 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 160 2.2E-17 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23530 5a9d2fe329130e9ef29f14972543b9a9 177 Pfam PF04542 Sigma-70 region 2 13 78 1.6E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23530 5a9d2fe329130e9ef29f14972543b9a9 177 Pfam PF08281 Sigma-70, region 4 111 162 8.2E-12 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS16295 46076d945da5595c69af87c516b313e9 266 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 18 171 29.67 T 28-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AL504_RS16295 46076d945da5595c69af87c516b313e9 266 Pfam PF03975 CheD chemotactic sensory transduction 65 167 1.3E-31 T 28-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AL504_RS16295 46076d945da5595c69af87c516b313e9 266 SUPERFAMILY SSF64438 23 169 8.42E-50 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 SUPERFAMILY SSF46785 12 114 9.97E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 SUPERFAMILY SSF53850 95 304 3.44E-46 T 28-03-2018 AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 Gene3D G3DSA:1.10.10.10 6 88 7.8E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 Gene3D G3DSA:3.40.190.10 94 181 5.2E-14 T 28-03-2018 AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 Pfam PF03466 LysR substrate binding domain 94 301 8.6E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 Gene3D G3DSA:3.40.190.10 182 271 2.6E-28 T 28-03-2018 AL504_RS29760 bb47933552d923dd657cbafba1c0097c 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.2E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS06610 b2e3f7528d55b92ecf230d197f9a75f5 343 SUPERFAMILY SSF56059 114 326 3.03E-22 T 28-03-2018 AL504_RS06610 b2e3f7528d55b92ecf230d197f9a75f5 343 Gene3D G3DSA:3.40.50.20 15 131 9.3E-10 T 28-03-2018 AL504_RS06610 b2e3f7528d55b92ecf230d197f9a75f5 343 Gene3D G3DSA:3.30.470.20 132 331 8.4E-23 T 28-03-2018 AL504_RS00345 fba5a855319d3cf6a41264dfce3b72bf 95 Pfam PF01381 Helix-turn-helix 19 59 6.7E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS00345 fba5a855319d3cf6a41264dfce3b72bf 95 Gene3D G3DSA:1.10.260.40 1 82 2.4E-10 T 28-03-2018 AL504_RS00345 fba5a855319d3cf6a41264dfce3b72bf 95 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 2 81 2.1E-30 T 28-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 AL504_RS00345 fba5a855319d3cf6a41264dfce3b72bf 95 SUPERFAMILY SSF47413 7 86 5.12E-21 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 SMART SM00345 11 69 3.9E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 SUPERFAMILY SSF46785 11 73 1.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 Gene3D G3DSA:1.20.120.530 72 203 2.4E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 Gene3D G3DSA:1.10.10.10 3 71 3.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 Pfam PF07729 FCD domain 79 201 2.4E-19 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 1.0E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 SMART SM00895 79 203 3.5E-13 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS12725 ec36b1a1ef6d5c2829bac098cb41a8c2 206 SUPERFAMILY SSF48008 75 201 1.54E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 SMART SM00387 331 442 6.2E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 437 1.7E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 288 1.3E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 Gene3D G3DSA:3.30.565.10 296 439 7.2E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 Gene3D G3DSA:1.20.5.1040 7 56 5.3E-4 T 28-03-2018 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 SMART SM00388 222 288 1.7E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 6 435 9.5E-104 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 SMART SM00304 168 221 1.4E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 SUPERFAMILY SSF47384 205 288 1.88E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 8.4E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 8.4E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 8.4E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 Gene3D G3DSA:1.10.287.130 212 284 6.8E-12 T 28-03-2018 AL504_RS17540 4a348ad9813ea4897e5ae295f8371d52 446 SUPERFAMILY SSF55874 277 433 2.62E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23360 75471db8eda0981a749b626c3995b257 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 2.2E-56 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 3.6E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 3.6E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 3.6E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 3.6E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 3.6E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.393 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 Pfam PF01467 Cytidylyltransferase-like 5 133 3.6E-19 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 Gene3D G3DSA:3.40.50.620 1 158 2.8E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS23360 75471db8eda0981a749b626c3995b257 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 4.7E-15 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL504_RS23360 75471db8eda0981a749b626c3995b257 167 SUPERFAMILY SSF52374 1 156 1.41E-43 T 28-03-2018 AL504_RS27505 d234aef3ad6c9d5ac392eae5a925e611 290 Gene3D G3DSA:3.40.50.720 1 165 6.5E-32 T 28-03-2018 AL504_RS27505 d234aef3ad6c9d5ac392eae5a925e611 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 1.1E-16 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL504_RS27505 d234aef3ad6c9d5ac392eae5a925e611 290 PIRSF PIRSF000103 1 290 6.9E-77 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS27505 d234aef3ad6c9d5ac392eae5a925e611 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 163 3.8E-37 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL504_RS27505 d234aef3ad6c9d5ac392eae5a925e611 290 SUPERFAMILY SSF48179 164 289 1.13E-26 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS27505 d234aef3ad6c9d5ac392eae5a925e611 290 SUPERFAMILY SSF51735 1 163 1.11E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS27505 d234aef3ad6c9d5ac392eae5a925e611 290 Gene3D G3DSA:1.10.1040.10 166 290 7.2E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS29630 24d7fa1a7528fe197eb6c81af344b0de 281 SUPERFAMILY SSF52540 67 246 2.91E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29630 24d7fa1a7528fe197eb6c81af344b0de 281 SMART SM00382 67 194 3.5E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29630 24d7fa1a7528fe197eb6c81af344b0de 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 72 192 1.1E-10 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS29630 24d7fa1a7528fe197eb6c81af344b0de 281 Gene3D G3DSA:3.40.50.300 13 214 5.6E-16 T 28-03-2018 AL504_RS19095 a0d1d5d806fd891584063239c67d9279 357 Gene3D G3DSA:1.10.3470.10 9 356 3.2E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS19095 a0d1d5d806fd891584063239c67d9279 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 342 4.3E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS11290 297c63fbcc7cacdff949315c1e4bb2d1 249 SUPERFAMILY SSF52402 15 197 1.22E-46 T 28-03-2018 AL504_RS11290 297c63fbcc7cacdff949315c1e4bb2d1 249 Gene3D G3DSA:3.40.50.620 5 246 2.4E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS11290 297c63fbcc7cacdff949315c1e4bb2d1 249 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 40 233 3.2E-81 T 28-03-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 AL504_RS11290 297c63fbcc7cacdff949315c1e4bb2d1 249 PIRSF PIRSF000857 3 239 6.5E-78 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL504_RS11290 297c63fbcc7cacdff949315c1e4bb2d1 249 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 209 1.2E-39 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL504_RS03390 c1f1e3d89e1a554843bf0fc734224958 777 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 760 777 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS03390 c1f1e3d89e1a554843bf0fc734224958 777 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 165 2.5E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03390 c1f1e3d89e1a554843bf0fc734224958 777 Pfam PF00593 TonB dependent receptor 254 775 2.3E-51 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03390 c1f1e3d89e1a554843bf0fc734224958 777 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 777 4.6E-80 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS03390 c1f1e3d89e1a554843bf0fc734224958 777 Gene3D G3DSA:2.170.130.10 31 173 1.0E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03390 c1f1e3d89e1a554843bf0fc734224958 777 SUPERFAMILY SSF56935 30 777 1.4E-114 T 28-03-2018 AL504_RS03390 c1f1e3d89e1a554843bf0fc734224958 777 Gene3D G3DSA:2.40.170.20 179 777 2.5E-71 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS22180 e95ece8de86f6f3ed235ad69dfe46c06 1167 Pfam PF13550 Putative phage tail protein 326 487 1.9E-23 T 28-03-2018 IPR032876 Tip attachment protein J AL504_RS22180 e95ece8de86f6f3ed235ad69dfe46c06 1167 Gene3D G3DSA:2.60.40.10 631 828 5.7E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS22180 e95ece8de86f6f3ed235ad69dfe46c06 1167 Pfam PF09327 Domain of unknown function (DUF1983) 901 982 8.2E-24 T 28-03-2018 IPR015406 Domain of unknown function DUF1983 AL504_RS07615 95ec17261984c48154fbb2aabddbcc6c 180 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 18 172 4.4E-49 T 28-03-2018 IPR026353 Hypoxanthine-DNA glycosylase AL504_RS07615 95ec17261984c48154fbb2aabddbcc6c 180 SMART SM00986 20 176 1.2E-7 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS07615 95ec17261984c48154fbb2aabddbcc6c 180 SMART SM00987 20 176 1.2E-7 T 28-03-2018 AL504_RS07615 95ec17261984c48154fbb2aabddbcc6c 180 Pfam PF03167 Uracil DNA glycosylase superfamily 24 174 5.7E-8 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS07615 95ec17261984c48154fbb2aabddbcc6c 180 Gene3D G3DSA:3.40.470.10 14 178 2.1E-44 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS07615 95ec17261984c48154fbb2aabddbcc6c 180 SUPERFAMILY SSF52141 19 176 4.05E-33 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.7E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.7E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.7E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 Gene3D G3DSA:1.10.10.10 1 88 8.6E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.0E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 SUPERFAMILY SSF46785 3 110 1.21E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 Gene3D G3DSA:3.40.190.10 173 255 4.3E-9 T 28-03-2018 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 SUPERFAMILY SSF53850 89 282 1.47E-25 T 28-03-2018 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 Gene3D G3DSA:3.40.190.10 91 172 4.1E-13 T 28-03-2018 AL504_RS21720 92313de7880f01f9e22712ecdc0575b7 287 Pfam PF03466 LysR substrate binding domain 88 281 9.7E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS02410 a7247b408656325a1326d7ac29b0f2af 252 Gene3D G3DSA:3.30.450.40 81 250 1.5E-47 T 28-03-2018 IPR029016 GAF domain-like AL504_RS02410 a7247b408656325a1326d7ac29b0f2af 252 SUPERFAMILY SSF55781 66 245 3.19E-47 T 28-03-2018 IPR029016 GAF domain-like AL504_RS02410 a7247b408656325a1326d7ac29b0f2af 252 Pfam PF09339 IclR helix-turn-helix domain 8 57 2.5E-10 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS02410 a7247b408656325a1326d7ac29b0f2af 252 SMART SM00346 5 95 1.3E-5 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS02410 a7247b408656325a1326d7ac29b0f2af 252 Gene3D G3DSA:1.10.10.10 5 68 1.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02410 a7247b408656325a1326d7ac29b0f2af 252 Pfam PF01614 Bacterial transcriptional regulator 124 244 1.9E-28 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS02410 a7247b408656325a1326d7ac29b0f2af 252 SUPERFAMILY SSF46785 8 76 1.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 Gene3D G3DSA:3.30.70.270 355 529 5.7E-54 T 28-03-2018 AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 512 3.7E-41 T 28-03-2018 IPR000160 GGDEF domain AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 SUPERFAMILY SSF103190 183 262 3.85E-9 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 Pfam PF02743 Cache domain 93 263 7.7E-19 T 28-03-2018 IPR033479 Double Cache domain 1 AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 517 1.1E-44 T 28-03-2018 IPR000160 GGDEF domain AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 SUPERFAMILY SSF55073 366 519 1.57E-46 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 Gene3D G3DSA:3.30.450.20 162 279 1.5E-14 T 28-03-2018 AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 SMART SM00267 350 517 6.1E-56 T 28-03-2018 IPR000160 GGDEF domain AL504_RS14500 d70cedf8fd2e05de8580c9cce662025b 531 Gene3D G3DSA:3.30.450.20 80 161 1.2E-6 T 28-03-2018 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 Gene3D G3DSA:1.20.1250.20 15 219 1.2E-22 T 28-03-2018 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 SUPERFAMILY SSF103473 20 410 3.01E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 Pfam PF07690 Major Facilitator Superfamily 34 245 2.1E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 PRINTS PR01035 Tetracycline resistance protein signature 34 50 1.1E-13 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 PRINTS PR01035 Tetracycline resistance protein signature 161 183 1.1E-13 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 PRINTS PR01035 Tetracycline resistance protein signature 322 342 1.1E-13 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 PRINTS PR01035 Tetracycline resistance protein signature 357 380 1.1E-13 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 PRINTS PR01035 Tetracycline resistance protein signature 270 290 1.1E-13 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24405 dc6f9d01f41ed317400cf82376f252f5 413 Gene3D G3DSA:1.20.1250.20 224 412 4.7E-17 T 28-03-2018 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 PRINTS PR00124 ATP synthase C subunit signature 10 29 8.9E-5 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 PRINTS PR00124 ATP synthase C subunit signature 31 46 8.9E-5 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 PRINTS PR00124 ATP synthase C subunit signature 48 73 8.9E-5 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 Gene3D G3DSA:1.20.20.10 3 75 1.1E-14 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 SUPERFAMILY SSF81333 4 77 4.71E-18 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 Pfam PF00137 ATP synthase subunit C 9 71 2.9E-10 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 75 7.9E-22 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL504_RS16940 cf4006087a82c17e662058977fa39787 80 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 73 14.112 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS20020 aee99031bc8ebf5a66483e17c1571632 133 SUPERFAMILY SSF53137 18 133 9.16E-47 T 28-03-2018 AL504_RS20020 aee99031bc8ebf5a66483e17c1571632 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 133 32.884 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL504_RS20020 aee99031bc8ebf5a66483e17c1571632 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 3.5E-55 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS20020 aee99031bc8ebf5a66483e17c1571632 133 PIRSF PIRSF002131 1 133 3.4E-52 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL504_RS20020 aee99031bc8ebf5a66483e17c1571632 133 Pfam PF00411 Ribosomal protein S11 23 132 6.6E-50 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL504_RS20020 aee99031bc8ebf5a66483e17c1571632 133 Gene3D G3DSA:3.30.420.80 9 133 4.0E-45 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL504_RS20020 aee99031bc8ebf5a66483e17c1571632 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 SUPERFAMILY SSF50447 257 387 6.85E-27 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 526 1.0E-211 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 524 51.045 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Gene3D G3DSA:2.40.30.10 264 380 6.6E-18 T 28-03-2018 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Gene3D G3DSA:3.30.70.870 385 461 5.3E-13 T 28-03-2018 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 144 1.2E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Pfam PF00009 Elongation factor Tu GTP binding domain 10 273 2.6E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Pfam PF16658 Class II release factor RF3, C-terminal domain 383 511 1.5E-44 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 SUPERFAMILY SSF54980 388 459 3.2E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Gene3D G3DSA:3.40.50.300 79 263 1.9E-30 T 28-03-2018 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Pfam PF03144 Elongation factor Tu domain 2 310 376 3.2E-7 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 Gene3D G3DSA:3.40.50.300 4 78 6.6E-7 T 28-03-2018 AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS18490 34af375ff32ac706e49d0e54698cf09b 535 SUPERFAMILY SSF52540 7 273 3.06E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01640 58800f8688e27efcafc551744c1c65d5 438 SUPERFAMILY SSF103473 15 437 3.53E-76 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01640 58800f8688e27efcafc551744c1c65d5 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 310 325 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS01640 58800f8688e27efcafc551744c1c65d5 438 Gene3D G3DSA:1.20.1250.20 236 438 1.4E-25 T 28-03-2018 AL504_RS01640 58800f8688e27efcafc551744c1c65d5 438 Gene3D G3DSA:1.20.1250.20 13 217 6.8E-36 T 28-03-2018 AL504_RS01640 58800f8688e27efcafc551744c1c65d5 438 Pfam PF07690 Major Facilitator Superfamily 34 396 5.6E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS12060 d02c5bdd74db1852aa05d961c8d4d927 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 25 228 4.6E-41 T 28-03-2018 IPR006214 Bax inhibitor 1-related AL504_RS16655 c3d3ffa6dfd991b94d2345655ac732c7 523 SUPERFAMILY SSF55931 7 511 5.62E-183 T 28-03-2018 AL504_RS16655 c3d3ffa6dfd991b94d2345655ac732c7 523 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 523 211.14 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL504_RS16655 c3d3ffa6dfd991b94d2345655ac732c7 523 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 514 1.4E-191 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL504_RS16655 c3d3ffa6dfd991b94d2345655ac732c7 523 Pfam PF04262 Glutamate-cysteine ligase 13 376 1.7E-155 T 28-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL504_RS22125 e60cb0510022399860f5c46b1a52105e 233 Gene3D G3DSA:2.10.109.10 101 231 1.7E-16 T 28-03-2018 AL504_RS22125 e60cb0510022399860f5c46b1a52105e 233 SUPERFAMILY SSF47413 1 64 2.73E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS22125 e60cb0510022399860f5c46b1a52105e 233 Pfam PF00717 Peptidase S24-like 146 213 1.2E-6 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS22125 e60cb0510022399860f5c46b1a52105e 233 Gene3D G3DSA:1.10.260.40 1 72 5.1E-12 T 28-03-2018 AL504_RS22125 e60cb0510022399860f5c46b1a52105e 233 SMART SM00530 6 60 1.8E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS22125 e60cb0510022399860f5c46b1a52105e 233 SUPERFAMILY SSF51306 128 229 5.58E-16 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS13340 b6e0a80503c1bcc75474be42e3a71e83 230 SMART SM00448 6 116 1.0E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS13340 b6e0a80503c1bcc75474be42e3a71e83 230 Pfam PF00072 Response regulator receiver domain 8 116 1.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS13340 b6e0a80503c1bcc75474be42e3a71e83 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.4E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS13340 b6e0a80503c1bcc75474be42e3a71e83 230 SMART SM00862 152 228 2.5E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS13340 b6e0a80503c1bcc75474be42e3a71e83 230 Gene3D G3DSA:3.40.50.2300 2 126 1.2E-32 T 28-03-2018 AL504_RS13340 b6e0a80503c1bcc75474be42e3a71e83 230 SUPERFAMILY SSF52172 6 186 2.05E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS13340 b6e0a80503c1bcc75474be42e3a71e83 230 Gene3D G3DSA:1.10.10.10 127 230 5.1E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05675 71f7edf925c8d8cc47d979486b578423 216 SUPERFAMILY SSF55811 3 140 9.38E-29 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS05675 71f7edf925c8d8cc47d979486b578423 216 SUPERFAMILY SSF46785 145 210 1.22E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05675 71f7edf925c8d8cc47d979486b578423 216 Gene3D G3DSA:3.90.79.10 2 153 8.8E-29 T 28-03-2018 AL504_RS05675 71f7edf925c8d8cc47d979486b578423 216 Gene3D G3DSA:1.10.10.10 154 208 2.9E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 SUPERFAMILY SSF52343 263 414 1.7E-33 T 28-03-2018 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 SUPERFAMILY SSF54862 12 70 4.45E-18 T 28-03-2018 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Pfam PF00037 4Fe-4S binding domain 15 36 1.2E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Pfam PF00037 4Fe-4S binding domain 42 64 2.1E-5 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PIRSF PIRSF000361 71 414 1.1E-71 T 28-03-2018 IPR015701 Ferredoxin--NADP reductase GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PIRSF PIRSF501177 1 414 2.6E-224 T 28-03-2018 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-1361|MetaCyc: PWY-6085|MetaCyc: PWY-6086 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Gene3D G3DSA:2.40.30.10 130 259 4.5E-31 T 28-03-2018 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Gene3D G3DSA:3.30.70.20 53 102 2.0E-5 T 28-03-2018 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Pfam PF00970 Oxidoreductase FAD-binding domain 198 262 1.3E-4 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 SUPERFAMILY SSF63380 126 267 7.8E-39 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Pfam PF00175 Oxidoreductase NAD-binding domain 275 381 4.1E-12 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 368 376 2.9E-18 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 293 2.9E-18 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 209 2.9E-18 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 238 247 2.9E-18 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 179 189 2.9E-18 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 2.9E-18 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 344 360 2.9E-18 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 TIGRFAM TIGR03224 benzo_boxA: benzoyl-CoA oxygenase/reductase, BoxA protein 9 414 1.4E-220 T 28-03-2018 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-1361|MetaCyc: PWY-6085|MetaCyc: PWY-6086 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Gene3D G3DSA:3.30.70.20 13 52 3.2E-14 T 28-03-2018 AL504_RS26155 5c2021cc0ee026d2d811cb836cf79d26 414 Gene3D G3DSA:3.40.50.80 260 413 5.2E-28 T 28-03-2018 AL504_RS01185 62112ac2dd061086c3a64f9edde8813f 804 Gene3D G3DSA:2.10.109.10 661 803 2.1E-9 T 28-03-2018 AL504_RS01185 62112ac2dd061086c3a64f9edde8813f 804 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 262 607 4.7E-100 T 28-03-2018 IPR018647 Domain of unknown function DUF2075 AL504_RS01185 62112ac2dd061086c3a64f9edde8813f 804 SUPERFAMILY SSF52540 176 381 5.36E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01185 62112ac2dd061086c3a64f9edde8813f 804 Gene3D G3DSA:3.40.50.300 240 423 4.3E-15 T 28-03-2018 AL504_RS01185 62112ac2dd061086c3a64f9edde8813f 804 SUPERFAMILY SSF51306 654 789 9.94E-8 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS18305 9d7f85cf0325ba91af44d00c61468426 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 28-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL504_RS18305 9d7f85cf0325ba91af44d00c61468426 249 SUPERFAMILY SSF52402 1 242 6.0E-86 T 28-03-2018 AL504_RS18305 9d7f85cf0325ba91af44d00c61468426 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 2.4E-45 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS18305 9d7f85cf0325ba91af44d00c61468426 249 SMART SM00893 23 211 1.6E-67 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS18305 9d7f85cf0325ba91af44d00c61468426 249 Gene3D G3DSA:3.40.50.620 1 248 1.5E-88 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS18305 9d7f85cf0325ba91af44d00c61468426 249 PIRSF PIRSF000090 1 249 3.5E-86 T 28-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 Gene3D G3DSA:1.10.10.10 2 21 0.0057 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 Gene3D G3DSA:3.40.50.2300 68 179 1.9E-32 T 28-03-2018 AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 58 7.4E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 Pfam PF13377 Periplasmic binding protein-like domain 181 340 1.8E-33 T 28-03-2018 AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 SUPERFAMILY SSF53822 70 341 5.39E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 Gene3D G3DSA:1.10.260.40 22 67 5.4E-18 T 28-03-2018 AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 SMART SM00354 6 81 4.5E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 SUPERFAMILY SSF47413 6 69 5.53E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS07090 7e15e513179d1217c74b24b20e047c5b 346 Gene3D G3DSA:3.40.50.2300 180 343 7.2E-48 T 28-03-2018 AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 SMART SM00382 365 551 8.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 Pfam PF00664 ABC transporter transmembrane region 21 294 1.7E-43 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 Pfam PF00005 ABC transporter 356 505 2.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 SUPERFAMILY SSF52540 331 575 6.23E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 Gene3D G3DSA:3.40.50.300 330 581 7.6E-77 T 28-03-2018 AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 Gene3D G3DSA:1.20.1560.10 1 329 1.4E-62 T 28-03-2018 AL504_RS08150 0a7eaa0f67dc4a98fe07d4d4618431c7 584 SUPERFAMILY SSF90123 3 326 4.71E-66 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 Gene3D G3DSA:3.90.1150.10 371 469 3.0E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 Gene3D G3DSA:1.10.10.10 1 67 1.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 Gene3D G3DSA:3.40.640.10 90 370 3.0E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 SUPERFAMILY SSF46785 2 75 1.24E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 SUPERFAMILY SSF53383 94 467 6.05E-91 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 Pfam PF00155 Aminotransferase class I and II 149 451 1.5E-29 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 SMART SM00345 7 66 2.8E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS22770 911f06e7ef2c6bfd8161e4d3d4d7d50f 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.9E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21625 9328e5547ce1eabbbe14f2f42896d87a 202 PIRSF PIRSF006324 1 201 3.4E-56 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS21625 9328e5547ce1eabbbe14f2f42896d87a 202 Pfam PF01810 LysE type translocator 16 199 1.8E-34 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 SUPERFAMILY SSF53155 116 195 6.47E-21 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 SUPERFAMILY SSF46689 14 60 4.93E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 Gene3D G3DSA:3.30.160.70 112 194 3.3E-21 T 28-03-2018 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 Gene3D G3DSA:1.10.10.10 195 279 2.9E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 198 276 1.5E-31 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 Gene3D G3DSA:1.10.10.60 65 111 4.2E-6 T 28-03-2018 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 197 276 1.2E-33 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 Gene3D G3DSA:1.10.10.60 8 64 1.9E-17 T 28-03-2018 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 SMART SM00342 27 109 1.7E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 SUPERFAMILY SSF46767 196 276 8.5E-30 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 Pfam PF12833 Helix-turn-helix domain 33 110 1.5E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 247 253 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL504_RS06085 303e2039a2b052db0bdb8e4604b3ec8b 280 SUPERFAMILY SSF46689 63 111 2.87E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 PIRSF PIRSF006232 8 324 3.3E-49 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 Gene3D G3DSA:2.60.120.10 142 272 9.1E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 Gene3D G3DSA:2.60.120.10 273 323 0.0056 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 Gene3D G3DSA:2.60.120.10 13 141 1.2E-28 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 Pfam PF02678 Pirin 47 117 3.8E-13 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 SUPERFAMILY SSF51182 240 321 4.8E-46 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 SUPERFAMILY SSF51182 22 207 4.8E-46 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS28740 6fd2902979d75e6984e2a31b858e4dc3 327 Pfam PF05726 Pirin C-terminal cupin domain 264 317 2.7E-10 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 SUPERFAMILY SSF53822 76 337 1.58E-38 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 Pfam PF13407 Periplasmic binding protein domain 130 323 3.0E-34 T 28-03-2018 IPR025997 Periplasmic binding protein AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 Gene3D G3DSA:1.10.260.40 16 61 2.5E-12 T 28-03-2018 AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 ProSitePatterns PS00356 LacI-type HTH domain signature. 18 36 - T 28-03-2018 AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 Gene3D G3DSA:3.40.50.2300 181 352 5.0E-22 T 28-03-2018 AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 SMART SM00354 15 85 7.9E-8 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 61 8.5E-14 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 Gene3D G3DSA:3.40.50.2300 74 180 6.0E-13 T 28-03-2018 AL504_RS29230 def8225ce3137e8055f95044d6ef1caf 353 SUPERFAMILY SSF47413 14 63 1.79E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 Gene3D G3DSA:2.30.30.30 2 61 1.2E-15 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 Hamap MF_00141 Elongation factor P [efp]. 1 184 46.696 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 SUPERFAMILY SSF50249 65 126 1.76E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 SMART SM00841 128 183 5.3E-27 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 SUPERFAMILY SSF50249 128 184 8.39E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 Pfam PF09285 Elongation factor P, C-terminal 129 183 5.4E-24 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 PIRSF PIRSF005901 1 185 1.3E-56 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 SMART SM01185 67 120 2.5E-20 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 ProSitePatterns PS01275 Elongation factor P signature. 149 168 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 3.3E-17 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.2E-16 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 SUPERFAMILY SSF50104 1 63 8.53E-15 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 TIGRFAM TIGR00038 efp: translation elongation factor P 3 184 8.0E-64 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 Gene3D G3DSA:2.40.50.140 128 183 1.5E-24 T 28-03-2018 AL504_RS28675 10e130fbfa693e5a228d04a35c65ac1a 186 Gene3D G3DSA:2.40.50.140 64 126 3.0E-20 T 28-03-2018 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.9E-36 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.9E-36 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.9E-36 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 SUPERFAMILY SSF110324 2 81 1.88E-32 T 28-03-2018 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 73 1.0E-14 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 Pfam PF01016 Ribosomal L27 protein 2 81 3.8E-36 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.113 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 3.8E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21450 f799c2ff52601eda32db8b0f9612565c 86 Gene3D G3DSA:2.40.50.100 20 85 8.3E-28 T 28-03-2018 AL504_RS10950 99d51ba22ae4286b77fe65e9bace4bd8 273 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 100 207 1.8E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS10950 99d51ba22ae4286b77fe65e9bace4bd8 273 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 207 1.1E-10 T 28-03-2018 IPR023214 HAD-like domain AL504_RS10950 99d51ba22ae4286b77fe65e9bace4bd8 273 Gene3D G3DSA:3.40.50.1000 96 261 7.3E-26 T 28-03-2018 IPR023214 HAD-like domain AL504_RS10950 99d51ba22ae4286b77fe65e9bace4bd8 273 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 9 261 1.8E-110 T 28-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL504_RS10950 99d51ba22ae4286b77fe65e9bace4bd8 273 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 273 128.546 T 28-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL504_RS10950 99d51ba22ae4286b77fe65e9bace4bd8 273 Gene3D G3DSA:1.10.150.240 28 95 6.3E-33 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL504_RS10950 99d51ba22ae4286b77fe65e9bace4bd8 273 SUPERFAMILY SSF56784 10 263 3.67E-60 T 28-03-2018 IPR023214 HAD-like domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 SUPERFAMILY SSF55785 6 68 5.06E-8 T 28-03-2018 IPR000014 PAS domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 Gene3D G3DSA:3.30.450.20 3 128 9.4E-14 T 28-03-2018 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 111 5.4E-7 T 28-03-2018 IPR000014 PAS domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 229 351 1.6E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 SUPERFAMILY SSF55874 191 350 2.88E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 SMART SM00387 229 352 5.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 180 3.4E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 Pfam PF00989 PAS fold 4 89 4.2E-8 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 7.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 331 7.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 349 7.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 7.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 Gene3D G3DSA:1.10.287.130 129 182 1.1E-11 T 28-03-2018 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 SMART SM00388 124 189 3.4E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 SMART SM00091 1 66 1.1E-4 T 28-03-2018 IPR000014 PAS domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 Gene3D G3DSA:3.30.565.10 187 352 4.9E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04810 80be98c4adaeebdd69e87b461af5e878 354 SUPERFAMILY SSF47384 110 182 9.02E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS12695 5ecc234f7d7f9390bfea9ffba462af98 337 SUPERFAMILY SSF53850 127 300 6.38E-13 T 28-03-2018 AL504_RS12695 5ecc234f7d7f9390bfea9ffba462af98 337 Gene3D G3DSA:3.40.190.10 137 246 5.2E-8 T 28-03-2018 AL504_RS12695 5ecc234f7d7f9390bfea9ffba462af98 337 PIRSF PIRSF017082 8 336 5.9E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS12695 5ecc234f7d7f9390bfea9ffba462af98 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 333 2.0E-84 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 Pfam PF01926 50S ribosome-binding GTPase 222 335 9.5E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 340 1.2E-19 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 Gene3D G3DSA:3.30.1360.120 1 124 6.9E-43 T 28-03-2018 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 SUPERFAMILY SSF116878 374 450 9.02E-48 T 28-03-2018 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 SUPERFAMILY SSF116878 124 223 9.02E-48 T 28-03-2018 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 450 1.5E-99 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 Pfam PF12631 MnmE helical domain 126 447 4.2E-55 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 SUPERFAMILY SSF52540 71 173 1.12E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 SUPERFAMILY SSF52540 207 367 1.12E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 Gene3D G3DSA:1.20.120.430 125 284 2.9E-26 T 28-03-2018 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 Gene3D G3DSA:1.20.120.430 285 450 1.1E-33 T 28-03-2018 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 450 32.678 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL504_RS19430 4edbbe72d79b32bb8ef3dcd08a13c588 450 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 123 5.3E-38 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 Gene3D G3DSA:1.10.10.10 1 89 6.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 SUPERFAMILY SSF53850 90 282 1.21E-27 T 28-03-2018 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 Pfam PF03466 LysR substrate binding domain 89 281 1.5E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 Gene3D G3DSA:3.40.190.10 176 255 9.1E-11 T 28-03-2018 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 Gene3D G3DSA:3.40.190.10 92 175 2.7E-14 T 28-03-2018 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.5E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19515 eb4d190969bb8de3666c085c72217d9f 293 SUPERFAMILY SSF46785 4 111 2.51E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 Gene3D G3DSA:3.40.366.10 184 310 2.3E-29 T 28-03-2018 AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 Gene3D G3DSA:3.30.70.250 141 183 8.9E-22 T 28-03-2018 AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 PIRSF PIRSF000446 1 309 1.3E-106 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 SUPERFAMILY SSF55048 126 195 1.09E-17 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 Gene3D G3DSA:3.40.366.10 2 140 3.7E-36 T 28-03-2018 AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 Pfam PF00698 Acyl transferase domain 5 279 4.8E-36 T 28-03-2018 IPR014043 Acyl transferase AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 SUPERFAMILY SSF52151 2 126 1.92E-68 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 SUPERFAMILY SSF52151 196 296 1.92E-68 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 311 1.3E-28 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AL504_RS12160 2e90bcf9ff766fd4bc402e9e071ff0fe 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 4.5E-103 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 Pfam PF00919 Uncharacterized protein family UPF0004 5 83 6.6E-21 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 Gene3D G3DSA:2.40.50.140 377 438 4.0E-24 T 28-03-2018 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 Pfam PF04055 Radical SAM superfamily 143 319 9.5E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 SUPERFAMILY SSF102114 117 367 4.32E-54 T 28-03-2018 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 435 2.1E-105 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 434 2.6E-183 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 SMART SM00729 137 362 4.5E-54 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS21300 21c63e0169512fe5f646852468961e25 438 Gene3D G3DSA:3.80.30.20 134 376 1.8E-47 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL504_RS21300 21c63e0169512fe5f646852468961e25 438 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 437 62.946 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 Pfam PF00694 Aconitase C-terminal domain 693 825 5.4E-40 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 ProSitePatterns PS01244 Aconitase family signature 2. 495 508 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 Pfam PF00330 Aconitase family (aconitate hydratase) 69 564 2.6E-177 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 Gene3D G3DSA:3.20.19.10 655 900 3.0E-88 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 146 159 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 371 385 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 170 178 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 495 508 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 291 304 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 277 290 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 201 214 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 215 230 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 PRINTS PR00415 Aconitase family signature 433 444 3.3E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 Gene3D G3DSA:3.30.499.10 34 237 2.0E-69 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 SUPERFAMILY SSF52016 637 899 1.73E-82 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 Gene3D G3DSA:3.30.499.10 371 578 6.3E-64 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 ProSitePatterns PS00450 Aconitase family signature 1. 429 445 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 Gene3D G3DSA:3.40.1060.10 238 370 5.8E-44 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 SUPERFAMILY SSF53732 4 618 2.88E-212 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS28730 7842b9485459de33a92fb5ef0b37cf10 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 899 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AL504_RS21505 97ae0aaf18ac928d53c50143d7b1cf3f 335 Pfam PF00107 Zinc-binding dehydrogenase 157 253 1.7E-21 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS21505 97ae0aaf18ac928d53c50143d7b1cf3f 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 95 3.9E-13 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS21505 97ae0aaf18ac928d53c50143d7b1cf3f 335 SMART SM00829 10 327 3.2E-25 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS21505 97ae0aaf18ac928d53c50143d7b1cf3f 335 SUPERFAMILY SSF51735 118 263 2.24E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21505 97ae0aaf18ac928d53c50143d7b1cf3f 335 SUPERFAMILY SSF50129 2 154 8.67E-38 T 28-03-2018 IPR011032 GroES-like AL504_RS21505 97ae0aaf18ac928d53c50143d7b1cf3f 335 Gene3D G3DSA:3.40.50.720 140 313 8.2E-30 T 28-03-2018 AL504_RS21505 97ae0aaf18ac928d53c50143d7b1cf3f 335 Gene3D G3DSA:3.90.180.10 1 139 2.6E-42 T 28-03-2018 AL504_RS15785 41a45f5b2ee97078c928c447eb30bdf4 308 PIRSF PIRSF000401 1 308 2.5E-84 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL504_RS15785 41a45f5b2ee97078c928c447eb30bdf4 308 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 307 1.0E-81 T 28-03-2018 AL504_RS15785 41a45f5b2ee97078c928c447eb30bdf4 308 SUPERFAMILY SSF53335 90 303 5.93E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS15785 41a45f5b2ee97078c928c447eb30bdf4 308 Gene3D G3DSA:3.40.50.150 106 307 1.5E-29 T 28-03-2018 AL504_RS15785 41a45f5b2ee97078c928c447eb30bdf4 308 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 307 31.347 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL504_RS15785 41a45f5b2ee97078c928c447eb30bdf4 308 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 301 1.1E-62 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL504_RS27130 2b31179fccacbb5c822f2ac53868cc08 145 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 18 121 8.9E-19 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS27130 2b31179fccacbb5c822f2ac53868cc08 145 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 22 126 1.0E-47 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL504_RS27130 2b31179fccacbb5c822f2ac53868cc08 145 SUPERFAMILY SSF56214 16 142 1.83E-26 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS27130 2b31179fccacbb5c822f2ac53868cc08 145 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 17 143 24.642 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL504_RS27130 2b31179fccacbb5c822f2ac53868cc08 145 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 16 143 2.1E-27 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL504_RS27130 2b31179fccacbb5c822f2ac53868cc08 145 Gene3D G3DSA:3.90.470.20 12 145 2.3E-28 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS27130 2b31179fccacbb5c822f2ac53868cc08 145 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 16 143 1.8E-19 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL504_RS15645 bd03a481000179ba54c666bc634e4b22 182 PIRSF PIRSF016183 2 182 3.1E-62 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AL504_RS15645 bd03a481000179ba54c666bc634e4b22 182 Pfam PF04751 Protein of unknown function (DUF615) 20 178 3.6E-51 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AL504_RS15645 bd03a481000179ba54c666bc634e4b22 182 Gene3D G3DSA:1.10.60.30 106 182 5.9E-21 T 28-03-2018 AL504_RS15645 bd03a481000179ba54c666bc634e4b22 182 Gene3D G3DSA:1.10.60.30 32 101 3.6E-26 T 28-03-2018 AL504_RS15645 bd03a481000179ba54c666bc634e4b22 182 SUPERFAMILY SSF158710 30 180 2.09E-43 T 28-03-2018 IPR023153 PSPTO4464-like domain AL504_RS15645 bd03a481000179ba54c666bc634e4b22 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 11 182 21.578 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AL504_RS10870 fbc99e2d45e959357fef08d5603b3104 279 SUPERFAMILY SSF56112 33 53 3.89E-13 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS10870 fbc99e2d45e959357fef08d5603b3104 279 SUPERFAMILY SSF56112 85 231 3.89E-13 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS10870 fbc99e2d45e959357fef08d5603b3104 279 Gene3D G3DSA:1.10.510.10 81 248 8.2E-9 T 28-03-2018 AL504_RS10870 fbc99e2d45e959357fef08d5603b3104 279 Pfam PF01163 RIO1 family 86 177 9.5E-6 T 28-03-2018 AL504_RS27045 e21bb2cfc26b1c60df81f785ca682f7b 545 Gene3D G3DSA:3.40.50.720 60 187 2.5E-10 T 28-03-2018 AL504_RS27045 e21bb2cfc26b1c60df81f785ca682f7b 545 SUPERFAMILY SSF51905 504 539 4.32E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27045 e21bb2cfc26b1c60df81f785ca682f7b 545 SUPERFAMILY SSF51905 59 390 4.32E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27045 e21bb2cfc26b1c60df81f785ca682f7b 545 Gene3D G3DSA:1.10.405.10 188 275 1.2E-27 T 28-03-2018 AL504_RS27045 e21bb2cfc26b1c60df81f785ca682f7b 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 63 130 6.7E-10 T 28-03-2018 AL504_RS12940 7a941b22abacbd47c8db2dc6df0e5498 271 Pfam PF14302 Domain of unknown function (DUF4377) 178 264 7.5E-22 T 28-03-2018 IPR025485 Domain of unknown function DUF4377 AL504_RS12940 7a941b22abacbd47c8db2dc6df0e5498 271 Pfam PF03724 META domain 45 158 3.4E-15 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL504_RS23740 f3d3397584506d81b7b6fe9d1c8ba602 360 SUPERFAMILY SSF53335 83 360 7.37E-56 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS23740 f3d3397584506d81b7b6fe9d1c8ba602 360 Pfam PF02353 Mycolic acid cyclopropane synthetase 80 342 1.5E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS23740 f3d3397584506d81b7b6fe9d1c8ba602 360 Gene3D G3DSA:3.40.50.150 73 356 1.4E-43 T 28-03-2018 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 Gene3D G3DSA:3.40.47.10 1 260 2.7E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 382 1.8E-117 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 Gene3D G3DSA:3.40.47.10 261 381 1.1E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 ProSitePatterns PS00737 Thiolases signature 2. 330 346 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 SUPERFAMILY SSF53901 3 124 4.52E-65 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 SUPERFAMILY SSF53901 215 383 4.52E-65 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 PIRSF PIRSF000429 1 384 3.1E-109 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 Pfam PF02803 Thiolase, C-terminal domain 262 383 2.0E-36 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS31340 4803065a00ced1e26f8771a999cfc83b 384 Pfam PF00108 Thiolase, N-terminal domain 5 253 4.3E-60 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS15065 eee2e6518fac0f08181547d4861d5535 305 Pfam PF00892 EamA-like transporter family 162 293 5.7E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS15065 eee2e6518fac0f08181547d4861d5535 305 Pfam PF00892 EamA-like transporter family 21 150 5.9E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS15065 eee2e6518fac0f08181547d4861d5535 305 SUPERFAMILY SSF103481 59 155 1.24E-9 T 28-03-2018 AL504_RS15065 eee2e6518fac0f08181547d4861d5535 305 SUPERFAMILY SSF103481 204 293 3.53E-9 T 28-03-2018 AL504_RS07370 cff6af8fd2a52e9c2de7288cc0bbbbee 306 SUPERFAMILY SSF46785 4 109 3.32E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07370 cff6af8fd2a52e9c2de7288cc0bbbbee 306 Pfam PF03466 LysR substrate binding domain 87 291 5.8E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07370 cff6af8fd2a52e9c2de7288cc0bbbbee 306 Gene3D G3DSA:1.10.10.10 1 89 1.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07370 cff6af8fd2a52e9c2de7288cc0bbbbee 306 Gene3D G3DSA:3.40.190.10 176 261 3.4E-25 T 28-03-2018 AL504_RS07370 cff6af8fd2a52e9c2de7288cc0bbbbee 306 Gene3D G3DSA:3.40.190.10 90 175 6.8E-17 T 28-03-2018 AL504_RS07370 cff6af8fd2a52e9c2de7288cc0bbbbee 306 SUPERFAMILY SSF53850 88 295 8.32E-45 T 28-03-2018 AL504_RS07370 cff6af8fd2a52e9c2de7288cc0bbbbee 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 Gene3D G3DSA:2.40.10.10 162 276 1.4E-40 T 28-03-2018 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 SUPERFAMILY SSF50494 57 281 2.14E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 1.2E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 1.2E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 1.2E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 PRINTS PR00834 HtrA/DegQ protease family signature 183 207 1.2E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 1.2E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 1.2E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 Pfam PF13180 PDZ domain 287 376 4.5E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 SUPERFAMILY SSF50156 244 370 2.37E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 Gene3D G3DSA:2.30.42.10 281 384 9.1E-23 T 28-03-2018 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 Gene3D G3DSA:2.40.10.10 56 161 1.8E-28 T 28-03-2018 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 Pfam PF13365 Trypsin-like peptidase domain 112 247 2.7E-35 T 28-03-2018 AL504_RS18055 22103141627f20b31a8b24fdba2fd09b 386 SMART SM00228 286 369 5.0E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS15605 fa40dbb094693c4597e4317402b8a139 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 3.2E-62 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS15605 fa40dbb094693c4597e4317402b8a139 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL504_RS15605 fa40dbb094693c4597e4317402b8a139 142 SUPERFAMILY SSF52161 1 139 2.35E-59 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL504_RS15605 fa40dbb094693c4597e4317402b8a139 142 PIRSF PIRSF002181 1 142 2.3E-48 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL504_RS15605 fa40dbb094693c4597e4317402b8a139 142 Pfam PF00572 Ribosomal protein L13 15 138 1.6E-55 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL504_RS15605 fa40dbb094693c4597e4317402b8a139 142 Gene3D G3DSA:3.90.1180.10 1 142 3.5E-61 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL504_RS16955 80fcb53c64e4aea888e9f1f469fa36f3 520 SUPERFAMILY SSF160935 46 232 6.8E-113 T 28-03-2018 AL504_RS16955 80fcb53c64e4aea888e9f1f469fa36f3 520 SUPERFAMILY SSF160935 277 519 6.8E-113 T 28-03-2018 AL504_RS16955 80fcb53c64e4aea888e9f1f469fa36f3 520 Pfam PF06742 Protein of unknown function (DUF1214) 396 504 3.8E-35 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL504_RS16955 80fcb53c64e4aea888e9f1f469fa36f3 520 Pfam PF06863 Protein of unknown function (DUF1254) 96 225 2.2E-36 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL504_RS16955 80fcb53c64e4aea888e9f1f469fa36f3 520 Gene3D G3DSA:2.60.40.1610 97 223 1.0E-36 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL504_RS16955 80fcb53c64e4aea888e9f1f469fa36f3 520 Gene3D G3DSA:2.60.120.600 353 519 2.9E-51 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL504_RS16955 80fcb53c64e4aea888e9f1f469fa36f3 520 Gene3D G3DSA:1.10.3360.10 224 352 1.7E-21 T 28-03-2018 AL504_RS07300 91af042c8422f16571375c1c3eae7def 330 SUPERFAMILY SSF53850 111 274 7.6E-11 T 28-03-2018 AL504_RS07300 91af042c8422f16571375c1c3eae7def 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 326 2.0E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS07300 91af042c8422f16571375c1c3eae7def 330 Gene3D G3DSA:3.40.190.10 128 258 3.9E-13 T 28-03-2018 AL504_RS07300 91af042c8422f16571375c1c3eae7def 330 PIRSF PIRSF017082 2 330 3.0E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 95 1.6E-9 T 28-03-2018 IPR000014 PAS domain AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 167 2.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 155 2.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 125 139 2.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 Pfam PF00196 Bacterial regulatory proteins, luxR family 124 177 3.4E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 SMART SM00091 5 71 9.7E-4 T 28-03-2018 IPR000014 PAS domain AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 SUPERFAMILY SSF46894 106 180 4.08E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 SUPERFAMILY SSF55785 23 110 7.68E-12 T 28-03-2018 IPR000014 PAS domain AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 Pfam PF13426 PAS domain 25 100 2.9E-8 T 28-03-2018 IPR000014 PAS domain AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 Gene3D G3DSA:1.10.10.10 124 181 5.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 SMART SM00421 122 179 2.7E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS29450 b7ccc01bcaf35f3d337c4dbb3e8c174c 186 Gene3D G3DSA:3.30.450.20 6 123 2.6E-11 T 28-03-2018 AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 SUPERFAMILY SSF52402 1 143 5.11E-14 T 28-03-2018 AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 Pfam PF00582 Universal stress protein family 1 143 2.2E-7 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 Pfam PF00582 Universal stress protein family 153 275 1.2E-10 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 SUPERFAMILY SSF52402 153 275 1.34E-19 T 28-03-2018 AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 Gene3D G3DSA:3.40.50.620 1 147 7.4E-14 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 Gene3D G3DSA:3.40.50.620 151 277 9.8E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 PRINTS PR01438 Universal stress protein signature 152 170 6.5E-7 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 PRINTS PR01438 Universal stress protein signature 238 250 6.5E-7 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS04275 f4f913cbc8d1735de0bb36c22a28602b 278 PRINTS PR01438 Universal stress protein signature 256 278 6.5E-7 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.9E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.9E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.9E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.9E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.9E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.9E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 1.4E-62 T 28-03-2018 AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 SUPERFAMILY SSF51735 8 246 4.17E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 Gene3D G3DSA:3.40.50.720 43 247 1.3E-62 T 28-03-2018 AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 Gene3D G3DSA:3.40.50.720 1 42 7.7E-8 T 28-03-2018 AL504_RS07375 a53d69c598cc37e7250af3ed6a3c3c3a 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 2.1E-4 T 28-03-2018 AL504_RS23115 9a4774c4b2eb595b4b1fd2a30a82bb76 381 Pfam PF00534 Glycosyl transferases group 1 198 354 7.9E-36 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS23115 9a4774c4b2eb595b4b1fd2a30a82bb76 381 SUPERFAMILY SSF53756 12 374 3.77E-81 T 28-03-2018 AL504_RS23115 9a4774c4b2eb595b4b1fd2a30a82bb76 381 Pfam PF13439 Glycosyltransferase Family 4 23 181 3.8E-22 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS23115 9a4774c4b2eb595b4b1fd2a30a82bb76 381 Gene3D G3DSA:3.40.50.2000 6 190 8.8E-25 T 28-03-2018 AL504_RS23115 9a4774c4b2eb595b4b1fd2a30a82bb76 381 Gene3D G3DSA:3.40.50.2000 192 360 9.9E-43 T 28-03-2018 AL504_RS22555 d3abbac1fb64231bcdf806cf9bd2ec16 223 Gene3D G3DSA:1.20.1050.10 103 218 1.2E-24 T 28-03-2018 AL504_RS22555 d3abbac1fb64231bcdf806cf9bd2ec16 223 SUPERFAMILY SSF47616 87 216 9.1E-30 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS22555 d3abbac1fb64231bcdf806cf9bd2ec16 223 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 9 215 2.1E-80 T 28-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AL504_RS22555 d3abbac1fb64231bcdf806cf9bd2ec16 223 SUPERFAMILY SSF52833 5 90 2.6E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS22555 d3abbac1fb64231bcdf806cf9bd2ec16 223 Gene3D G3DSA:3.40.30.10 1 102 4.9E-31 T 28-03-2018 AL504_RS22555 d3abbac1fb64231bcdf806cf9bd2ec16 223 Pfam PF02798 Glutathione S-transferase, N-terminal domain 8 79 2.3E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS02605 0d300ce1dcc4c19d4a855ffae4b745cc 666 Pfam PF03477 ATP cone domain 5 92 6.5E-19 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL504_RS02605 0d300ce1dcc4c19d4a855ffae4b745cc 666 Gene3D G3DSA:3.20.70.20 130 661 1.5E-185 T 28-03-2018 AL504_RS02605 0d300ce1dcc4c19d4a855ffae4b745cc 666 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 654 1.1E-137 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AL504_RS02605 0d300ce1dcc4c19d4a855ffae4b745cc 666 SUPERFAMILY SSF51998 122 654 8.55E-155 T 28-03-2018 AL504_RS02605 0d300ce1dcc4c19d4a855ffae4b745cc 666 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 653 1.6E-169 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 Gene3D G3DSA:1.10.1660.10 1 56 2.3E-21 T 28-03-2018 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 SUPERFAMILY SSF46955 1 113 8.42E-33 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 SMART SM00422 1 70 2.4E-25 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.1E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.1E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.1E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 Pfam PF13411 MerR HTH family regulatory protein 1 68 5.4E-19 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 128 2.9E-48 T 28-03-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 AL504_RS06940 ee24e70906ed9091db6fa55b15df9e50 144 Gene3D G3DSA:1.10.1660.10 57 139 8.0E-19 T 28-03-2018 AL504_RS03405 961378ed947a3941a964137f1ee823ac 394 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 87 150 1.8E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS03405 961378ed947a3941a964137f1ee823ac 394 Gene3D G3DSA:1.10.3720.10 80 390 2.1E-48 T 28-03-2018 AL504_RS03405 961378ed947a3941a964137f1ee823ac 394 SUPERFAMILY SSF161098 86 154 4.91E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03405 961378ed947a3941a964137f1ee823ac 394 SUPERFAMILY SSF161098 188 375 5.36E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03405 961378ed947a3941a964137f1ee823ac 394 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 264 389 3.1E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14375 981e9de9c8ca0642cbd89c7d5a7b726b 131 Gene3D G3DSA:3.10.180.10 1 131 2.2E-38 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS14375 981e9de9c8ca0642cbd89c7d5a7b726b 131 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL504_RS14375 981e9de9c8ca0642cbd89c7d5a7b726b 131 SUPERFAMILY SSF54593 1 128 1.34E-38 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS14375 981e9de9c8ca0642cbd89c7d5a7b726b 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL504_RS14375 981e9de9c8ca0642cbd89c7d5a7b726b 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 6.4E-25 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS14375 981e9de9c8ca0642cbd89c7d5a7b726b 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 4.1E-67 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL504_RS22485 b019244525e321c7e358dceb0c909774 320 Pfam PF00682 HMGL-like 9 277 1.0E-48 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL504_RS22485 b019244525e321c7e358dceb0c909774 320 SUPERFAMILY SSF51569 8 297 1.06E-74 T 28-03-2018 AL504_RS22485 b019244525e321c7e358dceb0c909774 320 Gene3D G3DSA:3.20.20.70 4 298 1.4E-90 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS25640 7b92abcdad87adc1679d63e6ad2e9601 351 Pfam PF02547 Queuosine biosynthesis protein 6 346 2.8E-130 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL504_RS25640 7b92abcdad87adc1679d63e6ad2e9601 351 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 5 346 5.9E-131 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL504_RS25640 7b92abcdad87adc1679d63e6ad2e9601 351 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 4 347 45.395 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL504_RS25640 7b92abcdad87adc1679d63e6ad2e9601 351 SUPERFAMILY SSF111337 5 346 1.7E-129 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL504_RS25640 7b92abcdad87adc1679d63e6ad2e9601 351 Gene3D G3DSA:3.40.1780.10 1 106 8.4E-30 T 28-03-2018 AL504_RS25640 7b92abcdad87adc1679d63e6ad2e9601 351 Gene3D G3DSA:3.40.1780.10 173 347 3.4E-64 T 28-03-2018 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 Gene3D G3DSA:1.50.10.10 42 402 1.1E-95 T 28-03-2018 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 SUPERFAMILY SSF48208 31 392 1.15E-91 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 PRINTS PR00735 Glycosyl hydrolase family 8 signature 72 85 2.1E-14 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 PRINTS PR00735 Glycosyl hydrolase family 8 signature 134 152 2.1E-14 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 PRINTS PR00735 Glycosyl hydrolase family 8 signature 373 387 2.1E-14 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 PRINTS PR00735 Glycosyl hydrolase family 8 signature 199 216 2.1E-14 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 PRINTS PR00735 Glycosyl hydrolase family 8 signature 269 278 2.1E-14 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL504_RS19865 4981a0b52e994e36e8f4420af8b2b098 407 Pfam PF01270 Glycosyl hydrolases family 8 33 385 3.3E-70 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL504_RS14185 47754304af17e09e8b4df194770dcca8 411 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 180 395 7.2E-48 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL504_RS14185 47754304af17e09e8b4df194770dcca8 411 SUPERFAMILY SSF53187 322 398 3.14E-53 T 28-03-2018 AL504_RS14185 47754304af17e09e8b4df194770dcca8 411 SUPERFAMILY SSF53187 178 274 3.14E-53 T 28-03-2018 AL504_RS14185 47754304af17e09e8b4df194770dcca8 411 Gene3D G3DSA:3.40.630.40 177 400 1.0E-54 T 28-03-2018 AL504_RS14185 47754304af17e09e8b4df194770dcca8 411 Pfam PF11741 AMIN domain 1 104 5.8E-24 T 28-03-2018 IPR021731 AMIN domain AL504_RS14185 47754304af17e09e8b4df194770dcca8 411 SMART SM00646 240 395 3.6E-58 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL504_RS14245 b36ac52152da3cc44631460e332fba3c 277 PIRSF PIRSF015582 1 276 1.0E-83 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like AL504_RS14245 b36ac52152da3cc44631460e332fba3c 277 Gene3D G3DSA:3.20.20.360 3 255 1.7E-50 T 28-03-2018 AL504_RS14245 b36ac52152da3cc44631460e332fba3c 277 SUPERFAMILY SSF51621 3 226 3.21E-61 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS14245 b36ac52152da3cc44631460e332fba3c 277 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 214 8.3E-34 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 230 33.74 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 Gene3D G3DSA:3.40.50.880 1 230 2.0E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 Pfam PF00117 Glutamine amidotransferase class-I 6 227 9.3E-17 T 28-03-2018 IPR017926 Glutamine amidotransferase AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 141 229 4.3E-31 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 SUPERFAMILY SSF52317 3 113 1.08E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 SUPERFAMILY SSF52317 142 230 1.08E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 PIRSF PIRSF000495 125 232 2.4E-29 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL504_RS18005 5aaa693dbdf26ed8f2fdb460cd4f8fed 232 PIRSF PIRSF000495 2 119 4.4E-33 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL504_RS19360 d61f804624cc7d1dec982c6a4b519fdb 90 Pfam PF01809 Haemolytic domain 5 69 2.7E-30 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL504_RS19360 d61f804624cc7d1dec982c6a4b519fdb 90 SMART SM01234 2 69 5.0E-43 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL504_RS19360 d61f804624cc7d1dec982c6a4b519fdb 90 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 69 4.0E-22 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL504_RS19360 d61f804624cc7d1dec982c6a4b519fdb 90 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 75 3.3E-29 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL504_RS19360 d61f804624cc7d1dec982c6a4b519fdb 90 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 23.851 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 42 60 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 408 1.2E-123 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 Gene3D G3DSA:3.20.20.10 24 255 5.6E-50 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 Gene3D G3DSA:2.40.37.10 256 409 7.9E-45 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 SUPERFAMILY SSF51419 16 268 1.7E-61 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 266 1.5E-53 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 5 409 38.401 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 173 186 3.5E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 3.5E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 62 74 3.5E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 42 60 3.5E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 256 275 3.5E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01181 Diaminopimelate decarboxylase signature 376 398 1.0E-25 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01181 Diaminopimelate decarboxylase signature 284 302 1.0E-25 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01181 Diaminopimelate decarboxylase signature 60 77 1.0E-25 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 PRINTS PR01181 Diaminopimelate decarboxylase signature 148 157 1.0E-25 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 204 220 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 20 366 1.2E-23 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL504_RS30340 9735fa2dcb7b91fe02008b85e6499431 409 SUPERFAMILY SSF50621 240 408 4.19E-54 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS04515 621e2483e9765de637926933e5b6a171 273 Gene3D G3DSA:3.40.190.10 128 269 2.0E-37 T 28-03-2018 AL504_RS04515 621e2483e9765de637926933e5b6a171 273 Gene3D G3DSA:3.40.190.10 32 126 1.1E-12 T 28-03-2018 AL504_RS04515 621e2483e9765de637926933e5b6a171 273 Pfam PF03180 NLPA lipoprotein 34 265 9.8E-67 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS04515 621e2483e9765de637926933e5b6a171 273 SUPERFAMILY SSF53850 34 272 3.08E-66 T 28-03-2018 AL504_RS29755 0dd1524e7d4d67868cd0ecd56667a72b 247 Pfam PF01925 Sulfite exporter TauE/SafE 8 235 1.1E-27 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS02030 aa0e084ebcdd5cfe9481c4d2ba59724e 408 Gene3D G3DSA:3.40.1580.10 12 227 1.1E-9 T 28-03-2018 AL504_RS02030 aa0e084ebcdd5cfe9481c4d2ba59724e 408 Gene3D G3DSA:1.25.40.20 236 360 0.0018 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS00505 587415561a01138065d18f5a7bbfeb3d 200 Gene3D G3DSA:1.10.1740.10 8 106 6.8E-6 T 28-03-2018 AL504_RS00505 587415561a01138065d18f5a7bbfeb3d 200 Pfam PF08281 Sigma-70, region 4 137 189 1.7E-9 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00505 587415561a01138065d18f5a7bbfeb3d 200 Gene3D G3DSA:1.10.10.10 107 196 3.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00505 587415561a01138065d18f5a7bbfeb3d 200 SUPERFAMILY SSF88659 120 195 2.4E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00505 587415561a01138065d18f5a7bbfeb3d 200 SUPERFAMILY SSF88946 39 113 2.24E-5 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00505 587415561a01138065d18f5a7bbfeb3d 200 Pfam PF04542 Sigma-70 region 2 39 103 2.1E-5 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00505 587415561a01138065d18f5a7bbfeb3d 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 193 6.3E-13 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 SMART SM00344 6 115 1.5E-42 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 Gene3D G3DSA:1.10.10.10 1 56 9.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.7E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.7E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.7E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 Gene3D G3DSA:3.30.70.920 58 156 5.4E-27 T 28-03-2018 AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 SUPERFAMILY SSF54909 66 155 2.28E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 1.0E-19 T 28-03-2018 AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 4.0E-25 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS08240 d6a13c2b4b3a9076c65857c4051ee14d 156 SUPERFAMILY SSF46785 4 96 2.23E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17380 78c10b5013eff8476d2839eb8494136f 159 Pfam PF03928 Haem-degrading 7 137 2.7E-26 T 28-03-2018 IPR005624 Haem-degrading AL504_RS17380 78c10b5013eff8476d2839eb8494136f 159 SUPERFAMILY SSF143744 2 140 4.97E-34 T 28-03-2018 AL504_RS14305 3b7bb5e26d102abd3203eb90e78c3f90 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 323 2.0E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14305 3b7bb5e26d102abd3203eb90e78c3f90 327 PIRSF PIRSF017082 4 326 1.1E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14305 3b7bb5e26d102abd3203eb90e78c3f90 327 Gene3D G3DSA:3.40.190.10 127 236 7.5E-14 T 28-03-2018 AL504_RS14305 3b7bb5e26d102abd3203eb90e78c3f90 327 SUPERFAMILY SSF53850 113 286 2.02E-15 T 28-03-2018 AL504_RS26350 2a9b5d1df251d6895870321d6100e82f 194 Gene3D G3DSA:1.20.910.10 2 188 5.0E-25 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS26350 2a9b5d1df251d6895870321d6100e82f 194 Pfam PF01126 Heme oxygenase 6 182 3.2E-8 T 28-03-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS26350 2a9b5d1df251d6895870321d6100e82f 194 SUPERFAMILY SSF48613 5 184 2.0E-35 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 7.0E-45 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 SUPERFAMILY SSF53901 272 392 3.36E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 PIRSF PIRSF000429 1 393 2.1E-112 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 7.7E-53 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 Gene3D G3DSA:3.40.47.10 270 390 1.5E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.0E-118 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 Gene3D G3DSA:3.40.47.10 1 269 8.6E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS01725 19c5f438cea57fe69fa9e10e33bbf291 393 SUPERFAMILY SSF53901 1 267 5.9E-63 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS14260 51782d175da7ef7bdbdaec55f18204a1 297 Gene3D G3DSA:1.10.10.10 1 85 6.9E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14260 51782d175da7ef7bdbdaec55f18204a1 297 SUPERFAMILY SSF46785 1 113 3.02E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14260 51782d175da7ef7bdbdaec55f18204a1 297 Gene3D G3DSA:3.40.190.10 178 269 3.8E-23 T 28-03-2018 AL504_RS14260 51782d175da7ef7bdbdaec55f18204a1 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14260 51782d175da7ef7bdbdaec55f18204a1 297 Pfam PF03466 LysR substrate binding domain 89 293 1.8E-46 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14260 51782d175da7ef7bdbdaec55f18204a1 297 Gene3D G3DSA:3.40.190.10 90 177 5.1E-26 T 28-03-2018 AL504_RS14260 51782d175da7ef7bdbdaec55f18204a1 297 SUPERFAMILY SSF53850 90 296 2.66E-46 T 28-03-2018 AL504_RS25745 8da62e89465c30447b97d5d0c3e49755 387 Gene3D G3DSA:3.40.1090.10 1 340 4.1E-40 T 28-03-2018 AL504_RS25745 8da62e89465c30447b97d5d0c3e49755 387 SUPERFAMILY SSF52151 1 258 1.05E-46 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL504_RS25745 8da62e89465c30447b97d5d0c3e49755 387 Pfam PF01734 Patatin-like phospholipase 1 223 3.0E-20 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL504_RS10945 c283876a84e436133e0e48c3910754c7 340 Gene3D G3DSA:3.40.190.10 23 148 4.2E-16 T 28-03-2018 AL504_RS10945 c283876a84e436133e0e48c3910754c7 340 SUPERFAMILY SSF53850 25 329 4.59E-74 T 28-03-2018 AL504_RS10945 c283876a84e436133e0e48c3910754c7 340 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 8 336 1.1E-159 T 28-03-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AL504_RS10945 c283876a84e436133e0e48c3910754c7 340 Gene3D G3DSA:3.40.190.10 149 327 1.0E-25 T 28-03-2018 AL504_RS10945 c283876a84e436133e0e48c3910754c7 340 PIRSF PIRSF002825 1 332 4.6E-95 T 28-03-2018 IPR026045 Ferric binding protein AL504_RS10945 c283876a84e436133e0e48c3910754c7 340 Pfam PF13343 Bacterial extracellular solute-binding protein 73 313 2.2E-32 T 28-03-2018 AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 Gene3D G3DSA:1.10.10.10 1 85 5.8E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 8.4E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 SUPERFAMILY SSF46785 2 113 1.29E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 SUPERFAMILY SSF53850 91 295 7.76E-55 T 28-03-2018 AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 Gene3D G3DSA:3.40.190.10 182 264 1.5E-25 T 28-03-2018 AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 Pfam PF03466 LysR substrate binding domain 89 293 1.3E-54 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00970 082facc5c1c9c621079b75cab52db9ad 299 Gene3D G3DSA:3.40.190.10 90 181 2.2E-29 T 28-03-2018 AL504_RS26955 73290213f5dbfb547efab581214d4b5c 356 Gene3D G3DSA:2.130.10.10 291 353 3.2E-4 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS26955 73290213f5dbfb547efab581214d4b5c 356 Gene3D G3DSA:2.130.10.10 8 290 1.0E-28 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS26955 73290213f5dbfb547efab581214d4b5c 356 Pfam PF10282 Lactonase, 7-bladed beta-propeller 11 352 1.2E-80 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller AL504_RS26955 73290213f5dbfb547efab581214d4b5c 356 SUPERFAMILY SSF51004 35 336 4.32E-31 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AL504_RS27110 90d1887eaf7d244667b791bb9b4b3d77 423 Gene3D G3DSA:1.20.1600.10 35 324 2.0E-30 T 28-03-2018 AL504_RS27110 90d1887eaf7d244667b791bb9b4b3d77 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 292 7.0E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS27110 90d1887eaf7d244667b791bb9b4b3d77 423 SUPERFAMILY SSF111369 52 299 6.15E-81 T 28-03-2018 AL504_RS27110 90d1887eaf7d244667b791bb9b4b3d77 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 373 4.7E-84 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS12765 6af7e786ed0db4ea3dc880541116fd62 226 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 2.1E-77 T 28-03-2018 IPR019903 Repair of iron centres family AL504_RS12765 6af7e786ed0db4ea3dc880541116fd62 226 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 3.0E-21 T 28-03-2018 IPR019903 Repair of iron centres family AL504_RS12765 6af7e786ed0db4ea3dc880541116fd62 226 Gene3D G3DSA:1.10.3910.10 4 61 6.4E-11 T 28-03-2018 AL504_RS12765 6af7e786ed0db4ea3dc880541116fd62 226 Gene3D G3DSA:1.20.120.520 62 222 1.9E-29 T 28-03-2018 AL504_RS12765 6af7e786ed0db4ea3dc880541116fd62 226 Pfam PF01814 Hemerythrin HHE cation binding domain 77 215 5.5E-23 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 Gene3D G3DSA:3.40.50.300 12 302 6.1E-68 T 28-03-2018 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 Gene3D G3DSA:3.40.50.300 318 604 1.9E-73 T 28-03-2018 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 SMART SM00382 357 549 3.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 SMART SM00382 44 249 1.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 283 1.3E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 551 586 1.0E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 549 599 1.4E-10 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 SUPERFAMILY SSF52540 16 271 1.36E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 SUPERFAMILY SSF52540 321 571 4.4E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 Pfam PF00005 ABC transporter 36 199 8.7E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS11915 dfdc7b276c3f0627d030a836f0f43ad8 628 Pfam PF00005 ABC transporter 349 498 1.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19545 3c1160d30459e3a6d3f6b47cec5327a9 560 SUPERFAMILY SSF161098 312 543 1.2E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19545 3c1160d30459e3a6d3f6b47cec5327a9 560 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 279 5.5E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19545 3c1160d30459e3a6d3f6b47cec5327a9 560 Gene3D G3DSA:1.10.3720.10 25 282 2.1E-46 T 28-03-2018 AL504_RS19545 3c1160d30459e3a6d3f6b47cec5327a9 560 Gene3D G3DSA:1.10.3720.10 304 560 4.4E-16 T 28-03-2018 AL504_RS19545 3c1160d30459e3a6d3f6b47cec5327a9 560 SUPERFAMILY SSF161098 23 275 4.03E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19235 6411f3e052844267902f342dab96209f 356 SUPERFAMILY SSF52540 4 242 3.51E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19235 6411f3e052844267902f342dab96209f 356 Gene3D G3DSA:3.40.50.300 1 246 4.2E-75 T 28-03-2018 AL504_RS19235 6411f3e052844267902f342dab96209f 356 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19235 6411f3e052844267902f342dab96209f 356 Pfam PF08402 TOBE domain 275 347 1.0E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS19235 6411f3e052844267902f342dab96209f 356 Gene3D G3DSA:2.40.50.140 286 338 0.0052 T 28-03-2018 AL504_RS19235 6411f3e052844267902f342dab96209f 356 Gene3D G3DSA:2.40.50.100 247 285 1.2E-4 T 28-03-2018 AL504_RS19235 6411f3e052844267902f342dab96209f 356 Pfam PF00005 ABC transporter 20 161 8.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19235 6411f3e052844267902f342dab96209f 356 SMART SM00382 28 211 2.7E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19235 6411f3e052844267902f342dab96209f 356 SUPERFAMILY SSF50331 238 342 4.21E-11 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS16175 63aeb6c50a508fe35f4bf3097fbede29 284 Gene3D G3DSA:3.40.50.620 1 171 5.0E-67 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS16175 63aeb6c50a508fe35f4bf3097fbede29 284 SUPERFAMILY SSF52374 2 280 3.26E-95 T 28-03-2018 AL504_RS16175 63aeb6c50a508fe35f4bf3097fbede29 284 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 8.8E-95 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL504_RS16175 63aeb6c50a508fe35f4bf3097fbede29 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 278 7.8E-89 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL504_RS16175 63aeb6c50a508fe35f4bf3097fbede29 284 Gene3D G3DSA:3.30.1300.10 173 284 4.7E-32 T 28-03-2018 AL504_RS16175 63aeb6c50a508fe35f4bf3097fbede29 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 37.365 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL504_RS16175 63aeb6c50a508fe35f4bf3097fbede29 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 74 9.7E-8 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 Pfam PF00072 Response regulator receiver domain 7 116 3.8E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 SUPERFAMILY SSF52172 3 129 4.98E-41 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 SMART SM00448 5 116 2.3E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 SUPERFAMILY SSF46894 128 232 2.52E-30 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 SMART SM00862 155 231 1.1E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 3.5E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 Gene3D G3DSA:3.40.50.2300 1 126 3.6E-37 T 28-03-2018 AL504_RS02560 016d9e919e31832d69eaef2212736d3b 243 Gene3D G3DSA:1.10.10.10 127 237 1.3E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18090 04c19e2d88234cf8fdb5e650e4f1fa92 147 Gene3D G3DSA:2.30.30.220 7 103 3.1E-35 T 28-03-2018 IPR007481 Stringent starvation protein B AL504_RS18090 04c19e2d88234cf8fdb5e650e4f1fa92 147 PIRSF PIRSF005276 1 147 4.4E-50 T 28-03-2018 IPR007481 Stringent starvation protein B AL504_RS18090 04c19e2d88234cf8fdb5e650e4f1fa92 147 SUPERFAMILY SSF101738 3 111 1.7E-43 T 28-03-2018 IPR007481 Stringent starvation protein B AL504_RS18090 04c19e2d88234cf8fdb5e650e4f1fa92 147 Pfam PF04386 Stringent starvation protein B 5 147 2.1E-33 T 28-03-2018 IPR007481 Stringent starvation protein B AL504_RS06495 e0d507a69c1984a4fc07599238f21019 210 Pfam PF04344 Chemotaxis phosphatase, CheZ 14 210 9.0E-77 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL504_RS06495 e0d507a69c1984a4fc07599238f21019 210 Gene3D G3DSA:1.20.5.590 3 32 6.3E-12 T 28-03-2018 AL504_RS06495 e0d507a69c1984a4fc07599238f21019 210 Gene3D G3DSA:1.10.287.500 34 166 9.9E-22 T 28-03-2018 AL504_RS06495 e0d507a69c1984a4fc07599238f21019 210 SUPERFAMILY SSF75708 10 209 2.35E-63 T 28-03-2018 AL504_RS06495 e0d507a69c1984a4fc07599238f21019 210 PIRSF PIRSF002884 1 210 7.8E-86 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL504_RS18710 8a105c0fc2145480de3f6894359d9157 265 Gene3D G3DSA:1.10.10.60 214 264 5.1E-9 T 28-03-2018 AL504_RS18710 8a105c0fc2145480de3f6894359d9157 265 Gene3D G3DSA:1.10.10.60 153 213 2.9E-9 T 28-03-2018 AL504_RS18710 8a105c0fc2145480de3f6894359d9157 265 SMART SM00342 177 260 4.5E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS18710 8a105c0fc2145480de3f6894359d9157 265 SUPERFAMILY SSF46689 213 262 1.16E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS18710 8a105c0fc2145480de3f6894359d9157 265 Pfam PF12833 Helix-turn-helix domain 183 262 1.2E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00075 8a44b12cc3f94bb93a44b772fa523aee 292 Gene3D G3DSA:3.60.15.10 14 292 1.3E-26 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00075 8a44b12cc3f94bb93a44b772fa523aee 292 Pfam PF12706 Beta-lactamase superfamily domain 50 255 8.6E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00075 8a44b12cc3f94bb93a44b772fa523aee 292 SUPERFAMILY SSF56281 28 291 1.89E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS08105 41f1899e41e615c816c6d77827d0a2dc 445 Gene3D G3DSA:3.90.550.10 51 328 6.4E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS08105 41f1899e41e615c816c6d77827d0a2dc 445 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 31 438 2.6E-193 T 28-03-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 AL504_RS08105 41f1899e41e615c816c6d77827d0a2dc 445 Pfam PF00535 Glycosyl transferase family 2 78 245 4.0E-34 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS08105 41f1899e41e615c816c6d77827d0a2dc 445 SUPERFAMILY SSF53448 68 337 2.42E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS27200 7dbba6f434b23261c794bb915f2cd289 396 Pfam PF00155 Aminotransferase class I and II 44 389 1.4E-57 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS27200 7dbba6f434b23261c794bb915f2cd289 396 Gene3D G3DSA:3.40.640.10 52 293 1.4E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS27200 7dbba6f434b23261c794bb915f2cd289 396 SUPERFAMILY SSF53383 14 395 1.22E-98 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS27200 7dbba6f434b23261c794bb915f2cd289 396 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 391 1.8E-129 T 28-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL504_RS27200 7dbba6f434b23261c794bb915f2cd289 396 Gene3D G3DSA:3.90.1150.10 294 396 1.3E-22 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS27200 7dbba6f434b23261c794bb915f2cd289 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL504_RS21250 ec1c98ce69599f1820e9140be8ef3a1d 374 SUPERFAMILY SSF102405 88 297 8.09E-42 T 28-03-2018 AL504_RS21250 ec1c98ce69599f1820e9140be8ef3a1d 374 Gene3D G3DSA:3.40.50.450 120 271 2.7E-40 T 28-03-2018 AL504_RS21250 ec1c98ce69599f1820e9140be8ef3a1d 374 Pfam PF02481 DNA recombination-mediator protein A 80 288 2.2E-75 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL504_RS21250 ec1c98ce69599f1820e9140be8ef3a1d 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 297 8.8E-75 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL504_RS21250 ec1c98ce69599f1820e9140be8ef3a1d 374 Gene3D G3DSA:1.10.10.10 283 371 5.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 Gene3D G3DSA:3.40.50.720 8 257 6.0E-51 T 28-03-2018 AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.9E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.9E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.9E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 3.9E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.9E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 8.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 8.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 SUPERFAMILY SSF51735 8 256 3.74E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS18250 279184673f1593c1fc92b90f076f716d 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 4.6E-43 T 28-03-2018 AL504_RS29970 1c9d7b36d32f1e2a6d33723efe1e52ab 288 Gene3D G3DSA:1.10.3720.10 11 276 2.9E-38 T 28-03-2018 AL504_RS29970 1c9d7b36d32f1e2a6d33723efe1e52ab 288 SUPERFAMILY SSF161098 84 271 4.32E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29970 1c9d7b36d32f1e2a6d33723efe1e52ab 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 284 1.4E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS28495 5fc081e7eb3a4ffb3bbf5a5fd618c89c 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 331 9.3E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28495 5fc081e7eb3a4ffb3bbf5a5fd618c89c 350 SUPERFAMILY SSF51735 1 343 3.18E-89 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28495 5fc081e7eb3a4ffb3bbf5a5fd618c89c 350 Gene3D G3DSA:3.90.25.10 264 344 1.4E-21 T 28-03-2018 AL504_RS28495 5fc081e7eb3a4ffb3bbf5a5fd618c89c 350 Gene3D G3DSA:3.90.25.10 215 263 5.5E-10 T 28-03-2018 AL504_RS28495 5fc081e7eb3a4ffb3bbf5a5fd618c89c 350 Gene3D G3DSA:3.40.50.720 1 214 2.8E-38 T 28-03-2018 AL504_RS28495 5fc081e7eb3a4ffb3bbf5a5fd618c89c 350 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 5 342 1.5E-123 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 8.4E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 Pfam PF03466 LysR substrate binding domain 90 292 9.4E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 SUPERFAMILY SSF53850 92 302 3.92E-41 T 28-03-2018 AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 SUPERFAMILY SSF46785 13 113 5.59E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 Gene3D G3DSA:3.40.190.10 181 268 3.0E-20 T 28-03-2018 AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 Gene3D G3DSA:1.10.10.10 1 83 7.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03010 32146ee28f6ca4634906e58b35ee9b2d 309 Gene3D G3DSA:3.40.190.10 90 180 4.9E-21 T 28-03-2018 AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 Gene3D G3DSA:3.30.70.920 54 146 7.4E-19 T 28-03-2018 AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 7.1E-20 T 28-03-2018 AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.4E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.4E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.4E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.3E-15 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 SUPERFAMILY SSF54909 62 150 5.09E-16 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 Gene3D G3DSA:1.10.10.10 1 52 1.5E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 SUPERFAMILY SSF46785 1 60 7.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27570 587fda8b58e0bdb2d8b3aeea8d921e6e 150 SMART SM00344 1 110 2.9E-45 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS00205 aa7cf812ca8aa5216e5308b0dd5cbfdd 698 Pfam PF00593 TonB dependent receptor 232 697 7.6E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00205 aa7cf812ca8aa5216e5308b0dd5cbfdd 698 SUPERFAMILY SSF56935 25 697 9.33E-134 T 28-03-2018 AL504_RS00205 aa7cf812ca8aa5216e5308b0dd5cbfdd 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 155 1.1E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00205 aa7cf812ca8aa5216e5308b0dd5cbfdd 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 62 696 2.7E-103 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS00205 aa7cf812ca8aa5216e5308b0dd5cbfdd 698 Gene3D G3DSA:2.40.170.20 168 697 7.4E-85 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00205 aa7cf812ca8aa5216e5308b0dd5cbfdd 698 Gene3D G3DSA:2.170.130.10 22 163 1.4E-30 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS01145 be2d5f7b789e3f6e2a5941d199930af1 707 Gene3D G3DSA:2.40.170.20 169 706 2.6E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS01145 be2d5f7b789e3f6e2a5941d199930af1 707 Gene3D G3DSA:2.170.130.10 30 163 4.6E-32 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS01145 be2d5f7b789e3f6e2a5941d199930af1 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 155 3.5E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS01145 be2d5f7b789e3f6e2a5941d199930af1 707 SUPERFAMILY SSF56935 32 707 2.85E-93 T 28-03-2018 AL504_RS01145 be2d5f7b789e3f6e2a5941d199930af1 707 Pfam PF00593 TonB dependent receptor 235 704 5.0E-30 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS31265 f4118a8b3020e2728336b25e8b76fc5f 134 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 6.5E-69 T 28-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL504_RS31265 f4118a8b3020e2728336b25e8b76fc5f 134 SUPERFAMILY SSF82649 2 126 5.49E-48 T 28-03-2018 AL504_RS31265 f4118a8b3020e2728336b25e8b76fc5f 134 Gene3D G3DSA:3.90.1010.10 1 133 7.5E-52 T 28-03-2018 AL504_RS31265 f4118a8b3020e2728336b25e8b76fc5f 134 Pfam PF01592 NifU-like N terminal domain 3 125 1.8E-56 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL504_RS22055 79915bd457ef1bf423faede39a1c08fe 271 Gene3D G3DSA:2.40.30.10 10 135 1.2E-32 T 28-03-2018 AL504_RS22055 79915bd457ef1bf423faede39a1c08fe 271 SUPERFAMILY SSF63380 10 139 7.94E-14 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS22055 79915bd457ef1bf423faede39a1c08fe 271 Pfam PF04954 Siderophore-interacting protein 143 261 1.9E-39 T 28-03-2018 IPR007037 Siderophore-interacting protein AL504_RS22055 79915bd457ef1bf423faede39a1c08fe 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 21 135 2.3E-37 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AL504_RS22055 79915bd457ef1bf423faede39a1c08fe 271 Gene3D G3DSA:3.40.50.80 136 271 1.6E-42 T 28-03-2018 AL504_RS19205 6709ea0b4730ec9bdf9bab820a11abc1 355 Pfam PF13416 Bacterial extracellular solute-binding protein 56 314 2.2E-32 T 28-03-2018 AL504_RS19205 6709ea0b4730ec9bdf9bab820a11abc1 355 SUPERFAMILY SSF53850 31 351 5.67E-56 T 28-03-2018 AL504_RS19205 6709ea0b4730ec9bdf9bab820a11abc1 355 Gene3D G3DSA:3.40.190.10 23 149 2.9E-20 T 28-03-2018 AL504_RS19205 6709ea0b4730ec9bdf9bab820a11abc1 355 Gene3D G3DSA:3.40.190.10 150 310 5.0E-30 T 28-03-2018 AL504_RS11615 8c26494723c83a40cd8f276312ae1c88 262 Pfam PF13525 Outer membrane lipoprotein 30 235 2.9E-60 T 28-03-2018 AL504_RS11615 8c26494723c83a40cd8f276312ae1c88 262 Gene3D G3DSA:1.25.20.10 27 244 4.4E-18 T 28-03-2018 AL504_RS11615 8c26494723c83a40cd8f276312ae1c88 262 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 246 7.8E-84 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD AL504_RS11615 8c26494723c83a40cd8f276312ae1c88 262 SUPERFAMILY SSF48452 30 108 2.2E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS11615 8c26494723c83a40cd8f276312ae1c88 262 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 37.575 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD AL504_RS03940 8db04c63ca4f6439f35fd621b84af01a 214 SMART SM00530 21 76 1.1E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS03940 8db04c63ca4f6439f35fd621b84af01a 214 Pfam PF01381 Helix-turn-helix 22 74 2.4E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS03940 8db04c63ca4f6439f35fd621b84af01a 214 Pfam PF07883 Cupin domain 140 197 1.9E-9 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS03940 8db04c63ca4f6439f35fd621b84af01a 214 SUPERFAMILY SSF47413 15 84 9.57E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS03940 8db04c63ca4f6439f35fd621b84af01a 214 SUPERFAMILY SSF51182 103 197 2.58E-20 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS03940 8db04c63ca4f6439f35fd621b84af01a 214 Gene3D G3DSA:1.10.260.40 13 92 2.8E-15 T 28-03-2018 AL504_RS03940 8db04c63ca4f6439f35fd621b84af01a 214 Gene3D G3DSA:2.60.120.10 99 208 1.1E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 Pfam PF00342 Phosphoglucose isomerase 49 509 3.0E-142 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 PRINTS PR00662 Glucose-6-phosphate isomerase signature 231 249 2.3E-47 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 PRINTS PR00662 Glucose-6-phosphate isomerase signature 467 480 2.3E-47 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 PRINTS PR00662 Glucose-6-phosphate isomerase signature 308 329 2.3E-47 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 PRINTS PR00662 Glucose-6-phosphate isomerase signature 122 141 2.3E-47 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 PRINTS PR00662 Glucose-6-phosphate isomerase signature 435 453 2.3E-47 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 PRINTS PR00662 Glucose-6-phosphate isomerase signature 453 467 2.3E-47 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 SUPERFAMILY SSF53697 8 517 1.61E-157 T 28-03-2018 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 Gene3D G3DSA:3.40.50.10490 9 117 1.0E-11 T 28-03-2018 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 31 494 34.448 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 235 248 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 467 484 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 Gene3D G3DSA:3.40.50.10490 229 482 1.9E-102 T 28-03-2018 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 Gene3D G3DSA:3.40.50.10490 118 228 8.8E-33 T 28-03-2018 AL504_RS23145 c704de5f52beb5a2cb17749411e9c6e7 521 Gene3D G3DSA:1.10.1390.10 483 520 4.2E-15 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS08605 323b80f81294140e587647ef3f218b7c 216 SUPERFAMILY SSF52016 1 201 1.1E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS08605 323b80f81294140e587647ef3f218b7c 216 Gene3D G3DSA:3.20.19.10 1 184 1.4E-46 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS08605 323b80f81294140e587647ef3f218b7c 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 6.5E-81 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL504_RS08605 323b80f81294140e587647ef3f218b7c 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 42.83 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL504_RS08605 323b80f81294140e587647ef3f218b7c 216 Pfam PF00694 Aconitase C-terminal domain 1 132 1.2E-37 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS27220 f57a207f95fd2ba4395bbcd60f814891 495 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 208 263 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS27220 f57a207f95fd2ba4395bbcd60f814891 495 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 13 474 9.5E-231 T 28-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL504_RS27220 f57a207f95fd2ba4395bbcd60f814891 495 SUPERFAMILY SSF81442 15 471 7.85E-128 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS27220 f57a207f95fd2ba4395bbcd60f814891 495 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 1.3E-117 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS27220 f57a207f95fd2ba4395bbcd60f814891 495 Gene3D G3DSA:1.20.210.10 9 477 7.9E-98 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS18345 fa4f45415614a57b569e97f0a207a579 94 PIRSF PIRSF017854 10 94 2.4E-35 T 28-03-2018 IPR016704 Conjugal transfer, TrbD AL504_RS18345 fa4f45415614a57b569e97f0a207a579 94 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 19 90 2.0E-5 T 28-03-2018 AL504_RS18345 fa4f45415614a57b569e97f0a207a579 94 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 16 89 2.0E-11 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 259 277 9.8E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 192 212 9.8E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 Pfam PF01926 50S ribosome-binding GTPase 192 310 8.0E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 Hamap MF_00900 GTPase HflX [hflX]. 19 355 44.346 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 Gene3D G3DSA:3.40.50.300 223 346 5.2E-15 T 28-03-2018 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 Pfam PF16360 GTP-binding GTPase Middle Region 106 184 9.7E-29 T 28-03-2018 IPR032305 GTP-binding protein, middle domain AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 SUPERFAMILY SSF52540 190 350 1.49E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 2 350 8.0E-147 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 Gene3D G3DSA:3.40.50.300 161 222 1.2E-11 T 28-03-2018 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 PIRSF PIRSF006809 1 362 1.1E-134 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AL504_RS09105 b2e6ef141c04ff628169b5be2266230f 368 Pfam PF13167 GTP-binding GTPase N-terminal 18 104 2.5E-27 T 28-03-2018 IPR025121 GTPase HflX, N-terminal AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 327 551 9.3E-83 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Gene3D G3DSA:3.30.559.10 314 552 4.6E-83 T 28-03-2018 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Pfam PF00364 Biotin-requiring enzyme 6 76 4.1E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Pfam PF00364 Biotin-requiring enzyme 123 193 3.8E-19 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS06650 7e45d18182da6db180cde824c7350255 552 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Gene3D G3DSA:2.40.50.100 99 181 8.9E-14 T 28-03-2018 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 SUPERFAMILY SSF52777 314 550 4.27E-85 T 28-03-2018 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 SUPERFAMILY SSF51230 121 213 9.03E-22 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Gene3D G3DSA:2.40.50.100 2 63 4.0E-12 T 28-03-2018 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Pfam PF02817 e3 binding domain 251 286 9.8E-16 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 SUPERFAMILY SSF47005 246 291 1.1E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Gene3D G3DSA:4.10.320.10 242 305 7.5E-18 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Gene3D G3DSA:3.90.1170.30 182 218 7.0E-4 T 28-03-2018 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 Gene3D G3DSA:3.90.1170.30 64 98 3.4E-5 T 28-03-2018 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 145 174 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 94 552 1.2E-196 T 28-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AL504_RS06650 7e45d18182da6db180cde824c7350255 552 SUPERFAMILY SSF51230 3 96 2.05E-22 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS25295 12cd664c5a649e55fa5c8cc5831e65ba 170 SUPERFAMILY SSF88946 7 80 1.37E-17 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25295 12cd664c5a649e55fa5c8cc5831e65ba 170 Gene3D G3DSA:1.10.10.10 89 168 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25295 12cd664c5a649e55fa5c8cc5831e65ba 170 Pfam PF08281 Sigma-70, region 4 102 153 5.0E-19 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25295 12cd664c5a649e55fa5c8cc5831e65ba 170 Gene3D G3DSA:1.10.1740.10 2 78 8.1E-19 T 28-03-2018 AL504_RS25295 12cd664c5a649e55fa5c8cc5831e65ba 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 153 2.2E-25 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25295 12cd664c5a649e55fa5c8cc5831e65ba 170 SUPERFAMILY SSF88659 96 157 8.94E-18 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS25295 12cd664c5a649e55fa5c8cc5831e65ba 170 Pfam PF04542 Sigma-70 region 2 12 75 5.3E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 Gene3D G3DSA:3.30.565.10 296 454 4.8E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 SUPERFAMILY SSF47384 218 301 1.75E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 SMART SM00387 344 455 3.1E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 SMART SM00388 235 301 1.4E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 SUPERFAMILY SSF55874 290 451 4.32E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 1.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 SMART SM00304 181 234 3.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 Gene3D G3DSA:1.10.287.130 225 295 1.2E-11 T 28-03-2018 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 451 8.0E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 8.2E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 8.2E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 8.2E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS16490 5c1d4c644ea763db8cc9f915851a08b0 466 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 445 1.1E-118 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 SMART SM00388 232 290 0.0021 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 SUPERFAMILY SSF55874 287 437 4.19E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 SMART SM00304 179 231 1.7E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 SMART SM00387 330 441 9.5E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 Pfam PF00672 HAMP domain 179 227 8.9E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 435 2.7E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 Gene3D G3DSA:1.10.287.130 222 280 3.2E-6 T 28-03-2018 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 SUPERFAMILY SSF47384 217 286 2.75E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 Gene3D G3DSA:3.30.565.10 281 440 2.4E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 2.1E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.1E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS27430 6e177e092f077901cfd2e57db01bc88e 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 2.1E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28815 c659090b07ef26dee91877b0c46782c1 269 Gene3D G3DSA:3.40.50.720 122 268 5.4E-23 T 28-03-2018 AL504_RS28815 c659090b07ef26dee91877b0c46782c1 269 SUPERFAMILY SSF51735 110 253 8.4E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28815 c659090b07ef26dee91877b0c46782c1 269 SUPERFAMILY SSF53223 3 107 2.53E-23 T 28-03-2018 AL504_RS28815 c659090b07ef26dee91877b0c46782c1 269 Gene3D G3DSA:3.40.50.10860 1 121 6.7E-33 T 28-03-2018 AL504_RS28815 c659090b07ef26dee91877b0c46782c1 269 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 13 96 7.5E-20 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL504_RS19040 250f808859a54b89cadee9997e3e7ce7 237 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 17 219 40.66 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS19040 250f808859a54b89cadee9997e3e7ce7 237 Gene3D G3DSA:3.90.870.10 13 226 4.3E-81 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS19040 250f808859a54b89cadee9997e3e7ce7 237 SUPERFAMILY SSF55821 19 217 1.85E-76 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS19040 250f808859a54b89cadee9997e3e7ce7 237 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 21 214 4.5E-68 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS19040 250f808859a54b89cadee9997e3e7ce7 237 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 24 213 8.3E-75 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS12990 d80a9a862c775142c00e564810ed29a4 199 SUPERFAMILY SSF55469 5 198 6.02E-68 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL504_RS12990 d80a9a862c775142c00e564810ed29a4 199 Gene3D G3DSA:3.40.109.10 4 197 2.9E-24 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL504_RS12990 d80a9a862c775142c00e564810ed29a4 199 Pfam PF00881 Nitroreductase family 10 177 8.2E-15 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL504_RS21995 d1cee6172a08bb9819a0a9d8135809ab 176 SUPERFAMILY SSF55144 5 170 7.85E-38 T 28-03-2018 IPR009097 Cyclic phosphodiesterase AL504_RS21995 d1cee6172a08bb9819a0a9d8135809ab 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 5 170 8.5E-33 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AL504_RS21995 d1cee6172a08bb9819a0a9d8135809ab 176 Pfam PF02834 LigT like Phosphoesterase 12 88 9.2E-13 T 28-03-2018 IPR014051 Phosphoesterase, HXTX AL504_RS21995 d1cee6172a08bb9819a0a9d8135809ab 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 173 17.73 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AL504_RS21995 d1cee6172a08bb9819a0a9d8135809ab 176 Gene3D G3DSA:3.90.1140.10 4 172 4.7E-31 T 28-03-2018 AL504_RS04695 bf9e50f4b93d6d495d2c4224fa141438 826 Gene3D G3DSA:3.40.50.1110 53 275 4.9E-4 T 28-03-2018 AL504_RS04695 bf9e50f4b93d6d495d2c4224fa141438 826 Gene3D G3DSA:1.25.40.10 698 826 2.8E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04695 bf9e50f4b93d6d495d2c4224fa141438 826 Gene3D G3DSA:1.25.40.10 281 466 5.7E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04695 bf9e50f4b93d6d495d2c4224fa141438 826 SUPERFAMILY SSF48452 534 681 6.13E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04695 bf9e50f4b93d6d495d2c4224fa141438 826 SUPERFAMILY SSF48452 753 802 6.13E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04695 bf9e50f4b93d6d495d2c4224fa141438 826 Gene3D G3DSA:1.25.40.10 529 693 2.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 Pfam PF01938 TRAM domain 404 464 9.4E-16 T 28-03-2018 IPR002792 TRAM domain AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 Gene3D G3DSA:3.80.30.20 168 406 8.1E-55 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 28 462 9.9E-151 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 Pfam PF00919 Uncharacterized protein family UPF0004 28 128 3.5E-30 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 175 195 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 27 465 74.325 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 SUPERFAMILY SSF102114 153 396 1.02E-59 T 28-03-2018 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 28 464 7.1E-182 T 28-03-2018 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 Pfam PF04055 Radical SAM superfamily 175 350 5.1E-30 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS25580 cae7bfe1d72c7669f71c4da2e82098d4 475 SMART SM00729 171 392 2.0E-57 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 Gene3D G3DSA:2.170.130.10 118 269 4.2E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 Pfam PF07715 TonB-dependent Receptor Plug Domain 161 260 4.3E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 786 803 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 SMART SM00965 70 120 8.7E-6 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 Pfam PF00593 TonB dependent receptor 360 801 2.9E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 163 803 2.0E-105 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 Gene3D G3DSA:2.40.170.20 272 803 7.1E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24770 e9fa8bc3a88fdda000027195996a741f 803 SUPERFAMILY SSF56935 153 803 7.63E-116 T 28-03-2018 AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 Gene3D G3DSA:3.40.50.2300 177 315 2.5E-33 T 28-03-2018 AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 47 9.9E-9 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 Gene3D G3DSA:3.40.50.2300 55 176 4.3E-28 T 28-03-2018 AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 SUPERFAMILY SSF53822 60 332 3.21E-56 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 Pfam PF13377 Periplasmic binding protein-like domain 172 331 1.1E-29 T 28-03-2018 AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 SUPERFAMILY SSF47413 2 58 4.64E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 Gene3D G3DSA:1.10.260.40 1 54 3.9E-19 T 28-03-2018 AL504_RS29235 3b56bca473765e3dfa4c6f1979ee6b8a 337 SMART SM00354 1 70 6.1E-10 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS05430 9c1e1e6e9bcb937244a075a490a7d90c 120 SUPERFAMILY SSF46894 12 115 1.39E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS05430 9c1e1e6e9bcb937244a075a490a7d90c 120 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 115 9.9E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS05430 9c1e1e6e9bcb937244a075a490a7d90c 120 Gene3D G3DSA:1.10.10.10 9 119 5.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05430 9c1e1e6e9bcb937244a075a490a7d90c 120 SMART SM00862 34 115 6.5E-11 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS10050 64b78f08692706adea8a9578da160046 393 PIRSF PIRSF000521 5 151 5.8E-12 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS10050 64b78f08692706adea8a9578da160046 393 PIRSF PIRSF000521 161 388 6.1E-32 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS10050 64b78f08692706adea8a9578da160046 393 Pfam PF00202 Aminotransferase class-III 12 382 1.0E-110 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS10050 64b78f08692706adea8a9578da160046 393 Gene3D G3DSA:3.90.1150.10 280 388 4.6E-32 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS10050 64b78f08692706adea8a9578da160046 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 212 249 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS10050 64b78f08692706adea8a9578da160046 393 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 7 382 7.2E-135 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL504_RS10050 64b78f08692706adea8a9578da160046 393 SUPERFAMILY SSF53383 5 385 3.34E-123 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS10050 64b78f08692706adea8a9578da160046 393 Gene3D G3DSA:3.40.640.10 48 279 1.1E-70 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS10050 64b78f08692706adea8a9578da160046 393 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 2 386 44.668 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL504_RS09425 c0b1ab631a0ed524438dd98bd8f3c73a 355 SUPERFAMILY SSF53659 3 351 1.8E-120 T 28-03-2018 AL504_RS09425 c0b1ab631a0ed524438dd98bd8f3c73a 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL504_RS09425 c0b1ab631a0ed524438dd98bd8f3c73a 355 Gene3D G3DSA:3.40.718.10 211 352 1.7E-55 T 28-03-2018 AL504_RS09425 c0b1ab631a0ed524438dd98bd8f3c73a 355 Gene3D G3DSA:3.40.718.10 1 210 9.3E-65 T 28-03-2018 AL504_RS09425 c0b1ab631a0ed524438dd98bd8f3c73a 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 348 6.1E-88 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS09425 c0b1ab631a0ed524438dd98bd8f3c73a 355 SMART SM01329 6 348 8.2E-182 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS09425 c0b1ab631a0ed524438dd98bd8f3c73a 355 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 350 4.5E-171 T 28-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 AL504_RS03865 6f3d50f83db07faaaae82f8087cbee58 163 Gene3D G3DSA:3.10.450.50 1 163 2.0E-29 T 28-03-2018 AL504_RS03865 6f3d50f83db07faaaae82f8087cbee58 163 SUPERFAMILY SSF54427 9 162 8.78E-45 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS03865 6f3d50f83db07faaaae82f8087cbee58 163 Pfam PF00866 Ring hydroxylating beta subunit 24 154 1.5E-16 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 SMART SM00421 142 199 7.1E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 Pfam PF00072 Response regulator receiver domain 10 118 1.4E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 197 2.6E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 Gene3D G3DSA:1.10.10.10 140 202 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 3.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 3.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 3.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 SUPERFAMILY SSF52172 9 158 6.12E-33 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 SUPERFAMILY SSF46894 138 199 2.25E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 Gene3D G3DSA:3.40.50.2300 3 139 7.6E-28 T 28-03-2018 AL504_RS03075 6da794a07502ffe87572f59d7506adf6 204 SMART SM00448 8 118 1.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00010 01f29f1783ad1d8a8f4257717be7c9f5 88 TIGRFAM TIGR04359 TrbK_RP4: entry exclusion lipoprotein TrbK 4 75 8.7E-23 T 28-03-2018 IPR027584 Entry exclusion lipoprotein TrbK AL504_RS16275 f779079e681eefa51dfeb88eafe8ff64 396 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 88 152 2.4E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS16275 f779079e681eefa51dfeb88eafe8ff64 396 SUPERFAMILY SSF161098 190 377 3.14E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16275 f779079e681eefa51dfeb88eafe8ff64 396 Gene3D G3DSA:1.10.3720.10 192 393 5.0E-33 T 28-03-2018 AL504_RS16275 f779079e681eefa51dfeb88eafe8ff64 396 Gene3D G3DSA:1.10.3720.10 20 191 1.9E-17 T 28-03-2018 AL504_RS16275 f779079e681eefa51dfeb88eafe8ff64 396 SUPERFAMILY SSF161098 88 156 2.13E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16275 f779079e681eefa51dfeb88eafe8ff64 396 SUPERFAMILY SSF161098 183 199 2.13E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16275 f779079e681eefa51dfeb88eafe8ff64 396 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 266 391 5.7E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23520 faaccb7b4be0b692e97fee4e2e2fabd6 794 SUPERFAMILY SSF56935 99 794 2.52E-144 T 28-03-2018 AL504_RS23520 faaccb7b4be0b692e97fee4e2e2fabd6 794 Pfam PF00593 TonB dependent receptor 317 793 2.6E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23520 faaccb7b4be0b692e97fee4e2e2fabd6 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 241 3.0E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS23520 faaccb7b4be0b692e97fee4e2e2fabd6 794 Gene3D G3DSA:2.170.130.10 98 249 2.0E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS23520 faaccb7b4be0b692e97fee4e2e2fabd6 794 Gene3D G3DSA:2.40.170.20 255 794 9.2E-89 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23520 faaccb7b4be0b692e97fee4e2e2fabd6 794 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 793 2.5E-132 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 Gene3D G3DSA:1.10.10.10 23 97 3.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 SMART SM00345 36 95 3.0E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 SUPERFAMILY SSF46785 28 99 3.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 Pfam PF07702 UTRA domain 127 257 1.2E-13 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 SUPERFAMILY SSF64288 83 263 2.04E-25 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 SMART SM00866 121 257 6.7E-12 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 Gene3D G3DSA:3.40.1410.10 101 265 8.3E-23 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 95 3.5E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 6.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS19170 9f3a57d144f244773cca27d0242b46e6 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 6.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS06130 1388d82816e7029f3759a0adaff21b0e 202 SUPERFAMILY SSF53098 12 197 4.1E-62 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS06130 1388d82816e7029f3759a0adaff21b0e 202 Gene3D G3DSA:3.30.420.10 8 199 2.3E-62 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS06130 1388d82816e7029f3759a0adaff21b0e 202 Pfam PF01351 Ribonuclease HII 18 193 1.3E-32 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain AL504_RS06130 1388d82816e7029f3759a0adaff21b0e 202 Hamap MF_00052_B Ribonuclease HII [rnhB]. 16 195 34.313 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 Gene3D G3DSA:3.30.565.10 284 475 9.4E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 319 1.2E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 ProSitePatterns PS00436 Peroxidases active site signature. 348 359 - T 28-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 SMART SM00388 255 324 4.8E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 6.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 6.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 6.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 6.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 SMART SM00387 367 476 3.4E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 475 2.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 SUPERFAMILY SSF47384 248 321 3.92E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 SUPERFAMILY SSF55874 325 474 4.19E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS03080 9168c4d5374108db77717fe7e44bbbfa 479 Gene3D G3DSA:3.30.450.20 212 276 2.3E-5 T 28-03-2018 AL504_RS28630 f3d27e4eb59a7d00ae779c1d14d44f39 451 Pfam PF00437 Type II/IV secretion system protein 92 368 6.6E-78 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL504_RS28630 f3d27e4eb59a7d00ae779c1d14d44f39 451 Gene3D G3DSA:3.30.450.90 87 190 5.9E-35 T 28-03-2018 AL504_RS28630 f3d27e4eb59a7d00ae779c1d14d44f39 451 SUPERFAMILY SSF52540 72 404 6.29E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28630 f3d27e4eb59a7d00ae779c1d14d44f39 451 Gene3D G3DSA:3.40.50.300 191 432 7.2E-18 T 28-03-2018 AL504_RS29370 7bc5b12d1eb315064187eb692ffe8f80 358 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 225 246 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL504_RS29370 7bc5b12d1eb315064187eb692ffe8f80 358 Pfam PF00639 PPIC-type PPIASE domain 201 285 2.3E-20 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AL504_RS29370 7bc5b12d1eb315064187eb692ffe8f80 358 Gene3D G3DSA:3.10.50.40 176 312 5.0E-29 T 28-03-2018 AL504_RS29370 7bc5b12d1eb315064187eb692ffe8f80 358 SUPERFAMILY SSF109998 74 211 2.47E-5 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL504_RS29370 7bc5b12d1eb315064187eb692ffe8f80 358 SUPERFAMILY SSF54534 183 288 1.7E-25 T 28-03-2018 AL504_RS22230 ab7568d24f2305561fecfbafaf5997ae 250 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS22230 ab7568d24f2305561fecfbafaf5997ae 250 Pfam PF00005 ABC transporter 24 178 3.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS22230 ab7568d24f2305561fecfbafaf5997ae 250 SUPERFAMILY SSF52540 8 235 4.9E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS22230 ab7568d24f2305561fecfbafaf5997ae 250 SMART SM00382 33 225 4.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS22230 ab7568d24f2305561fecfbafaf5997ae 250 Gene3D G3DSA:3.40.50.300 6 239 1.6E-58 T 28-03-2018 AL504_RS23260 1979c06361f020a303db3ea65051a7f2 189 Gene3D G3DSA:2.50.20.10 28 188 1.7E-28 T 28-03-2018 AL504_RS23260 1979c06361f020a303db3ea65051a7f2 189 SUPERFAMILY SSF89392 18 188 2.43E-29 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL504_RS23260 1979c06361f020a303db3ea65051a7f2 189 Pfam PF03550 Outer membrane lipoprotein LolB 33 188 1.2E-32 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL504_RS23260 1979c06361f020a303db3ea65051a7f2 189 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 50 164 1.4E-20 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL504_RS23260 1979c06361f020a303db3ea65051a7f2 189 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 189 19.812 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 SUPERFAMILY SSF51905 5 172 2.59E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 SUPERFAMILY SSF51905 273 372 2.59E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 Pfam PF01494 FAD binding domain 7 348 2.0E-24 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 2.1E-19 T 28-03-2018 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 2.1E-19 T 28-03-2018 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 2.1E-19 T 28-03-2018 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 352 2.1E-19 T 28-03-2018 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.1E-19 T 28-03-2018 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 SUPERFAMILY SSF54373 177 278 4.32E-8 T 28-03-2018 AL504_RS01625 73858e755b2faf50a970a80b155b5669 385 Gene3D G3DSA:3.50.50.60 2 367 3.8E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06300 4eec983d4f896b14065d924d49d0cc25 104 Pfam PF01312 FlhB HrpN YscU SpaS Family 16 89 7.7E-17 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS06300 4eec983d4f896b14065d924d49d0cc25 104 Gene3D G3DSA:3.40.1690.10 15 93 3.6E-28 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL504_RS06300 4eec983d4f896b14065d924d49d0cc25 104 SUPERFAMILY SSF160544 16 93 6.02E-22 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL504_RS01525 7b45b11c870203b68d7a7647b6f2c9db 490 ProSitePatterns PS00571 Amidases signature. 165 196 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS01525 7b45b11c870203b68d7a7647b6f2c9db 490 Pfam PF01425 Amidase 36 467 2.6E-91 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS01525 7b45b11c870203b68d7a7647b6f2c9db 490 SUPERFAMILY SSF75304 13 476 2.75E-126 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS01525 7b45b11c870203b68d7a7647b6f2c9db 490 Gene3D G3DSA:3.90.1300.10 11 487 2.3E-122 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS00805 0e69d26ef2a503fd419f42fddbbad9b8 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 42 312 1.2E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00805 0e69d26ef2a503fd419f42fddbbad9b8 318 SUPERFAMILY SSF53850 105 281 3.47E-13 T 28-03-2018 AL504_RS00805 0e69d26ef2a503fd419f42fddbbad9b8 318 Gene3D G3DSA:3.40.190.10 120 227 4.6E-8 T 28-03-2018 AL504_RS00805 0e69d26ef2a503fd419f42fddbbad9b8 318 PIRSF PIRSF017082 1 318 1.9E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 PIRSF PIRSF004692 1 329 3.0E-126 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 Gene3D G3DSA:3.40.50.10490 6 204 8.1E-53 T 28-03-2018 AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 319 8.6E-101 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 SMART SM00116 215 263 0.24 T 28-03-2018 IPR000644 CBS domain AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 SMART SM00116 280 328 15.0 T 28-03-2018 IPR000644 CBS domain AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 Pfam PF00571 CBS domain 277 326 1.2E-5 T 28-03-2018 IPR000644 CBS domain AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 Pfam PF00571 CBS domain 215 263 1.8E-5 T 28-03-2018 IPR000644 CBS domain AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 SUPERFAMILY SSF53697 17 327 1.94E-63 T 28-03-2018 AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 Pfam PF01380 SIS domain 45 177 3.3E-29 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS21140 eaacf44b050571ea919743443a77b9bd 329 Gene3D G3DSA:3.10.580.10 205 327 4.3E-23 T 28-03-2018 AL504_RS26070 8f9b4d3c0a65cf1e084c056110165680 286 Pfam PF01614 Bacterial transcriptional regulator 131 256 1.3E-28 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS26070 8f9b4d3c0a65cf1e084c056110165680 286 Gene3D G3DSA:3.30.450.40 80 262 1.6E-45 T 28-03-2018 IPR029016 GAF domain-like AL504_RS26070 8f9b4d3c0a65cf1e084c056110165680 286 Pfam PF09339 IclR helix-turn-helix domain 15 66 2.4E-17 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS26070 8f9b4d3c0a65cf1e084c056110165680 286 Gene3D G3DSA:1.10.10.10 1 74 4.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26070 8f9b4d3c0a65cf1e084c056110165680 286 SUPERFAMILY SSF55781 79 256 3.47E-47 T 28-03-2018 IPR029016 GAF domain-like AL504_RS26070 8f9b4d3c0a65cf1e084c056110165680 286 SUPERFAMILY SSF46785 14 86 5.64E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26070 8f9b4d3c0a65cf1e084c056110165680 286 SMART SM00346 13 103 3.6E-23 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 75 93 1.4E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 1.4E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 361 441 1.7E-25 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Pfam PF01926 50S ribosome-binding GTPase 188 305 2.0E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Pfam PF01926 50S ribosome-binding GTPase 7 123 1.6E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 PIRSF PIRSF006485 3 449 3.6E-169 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 SUPERFAMILY SSF52540 6 175 4.32E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Hamap MF_00195 GTPase Der [der]. 4 444 37.861 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Gene3D G3DSA:3.30.300.20 362 442 8.8E-26 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 SMART SM00382 3 146 1.1 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 SMART SM00382 184 327 0.35 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 5 441 1.0E-170 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 185 351 5.2E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 161 1.1E-16 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Gene3D G3DSA:1.20.120.430 255 361 7.7E-14 T 28-03-2018 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Gene3D G3DSA:1.20.120.430 2 70 3.1E-12 T 28-03-2018 AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 SUPERFAMILY SSF52540 141 447 4.23E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09120 b929ee1fb9fecbd3c8c82d737a7481f0 451 Gene3D G3DSA:1.20.120.430 71 254 5.3E-47 T 28-03-2018 AL504_RS14420 597babc19c8f41e809fa085258436f15 346 Pfam PF01636 Phosphotransferase enzyme family 30 258 1.6E-36 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AL504_RS14420 597babc19c8f41e809fa085258436f15 346 Gene3D G3DSA:3.30.200.20 5 98 3.0E-29 T 28-03-2018 AL504_RS14420 597babc19c8f41e809fa085258436f15 346 SUPERFAMILY SSF56112 10 325 2.33E-50 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS14420 597babc19c8f41e809fa085258436f15 346 Gene3D G3DSA:3.90.1200.10 99 344 6.4E-36 T 28-03-2018 AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 394 3.7E-189 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 395 51.344 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 382 7.8E-48 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 PIRSF PIRSF001413 2 399 7.9E-161 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 Gene3D G3DSA:3.40.50.1100 203 396 3.2E-38 T 28-03-2018 AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 SUPERFAMILY SSF53686 7 393 3.01E-147 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS12245 471a9d17e0cda9b090c7399c22b3eed3 399 Gene3D G3DSA:3.40.50.1100 13 202 2.3E-43 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 377 391 5.0E-24 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 676 686 5.0E-24 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 748 5.0E-24 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 753 765 5.0E-24 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 542 5.0E-24 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 276 832 1.3E-175 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 SUPERFAMILY SSF81665 277 330 4.58E-16 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 SUPERFAMILY SSF81665 428 520 4.58E-16 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 SUPERFAMILY SSF55008 135 203 4.77E-11 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 Gene3D G3DSA:3.40.50.1000 656 797 1.7E-35 T 28-03-2018 IPR023214 HAD-like domain AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 Gene3D G3DSA:3.30.70.100 138 209 9.7E-7 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 Pfam PF00122 E1-E2 ATPase 327 508 4.1E-56 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 258 832 1.2E-121 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 299 813 6.5E-75 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 530 536 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 Gene3D G3DSA:3.40.1110.10 547 655 2.2E-25 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 Gene3D G3DSA:1.20.1110.10 275 545 3.4E-36 T 28-03-2018 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 Pfam PF00403 Heavy-metal-associated domain 141 197 7.7E-5 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 SUPERFAMILY SSF81653 329 427 1.57E-24 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 SUPERFAMILY SSF56784 527 546 6.48E-52 T 28-03-2018 IPR023214 HAD-like domain AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 SUPERFAMILY SSF56784 587 829 6.48E-52 T 28-03-2018 IPR023214 HAD-like domain AL504_RS06945 552e7ce47d1deac45e0f39e10039f160 840 Pfam PF00702 haloacid dehalogenase-like hydrolase 525 743 4.7E-40 T 28-03-2018 AL504_RS26565 3b758a0f1601deae629671fe4feebde3 311 Pfam PF12833 Helix-turn-helix domain 223 297 1.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS26565 3b758a0f1601deae629671fe4feebde3 311 SMART SM00342 217 300 4.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS26565 3b758a0f1601deae629671fe4feebde3 311 SUPERFAMILY SSF46689 253 303 2.15E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS26565 3b758a0f1601deae629671fe4feebde3 311 Gene3D G3DSA:1.10.10.60 195 256 1.3E-16 T 28-03-2018 AL504_RS26565 3b758a0f1601deae629671fe4feebde3 311 SUPERFAMILY SSF46689 201 250 2.37E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS26565 3b758a0f1601deae629671fe4feebde3 311 Gene3D G3DSA:1.10.10.60 257 311 1.9E-11 T 28-03-2018 AL504_RS26565 3b758a0f1601deae629671fe4feebde3 311 Pfam PF06719 AraC-type transcriptional regulator N-terminus 37 187 4.4E-46 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AL504_RS29020 d1bd3f810369b4c1ba06848d12c65faa 323 PIRSF PIRSF006493 1 321 8.0E-94 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AL504_RS29020 d1bd3f810369b4c1ba06848d12c65faa 323 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 263 30.939 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AL504_RS29020 d1bd3f810369b4c1ba06848d12c65faa 323 SUPERFAMILY SSF100939 4 262 5.3E-47 T 28-03-2018 IPR016194 SPOC-like, C-terminal domain AL504_RS29020 d1bd3f810369b4c1ba06848d12c65faa 323 SMART SM00559 54 182 1.8E-30 T 28-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 AL504_RS29020 d1bd3f810369b4c1ba06848d12c65faa 323 Pfam PF02735 Ku70/Ku80 beta-barrel domain 13 194 1.2E-33 T 28-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 AL504_RS29020 d1bd3f810369b4c1ba06848d12c65faa 323 TIGRFAM TIGR02772 Ku_bact: Ku protein 4 264 4.8E-93 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AL504_RS29020 d1bd3f810369b4c1ba06848d12c65faa 323 Gene3D G3DSA:2.40.290.10 3 183 8.2E-29 T 28-03-2018 IPR016194 SPOC-like, C-terminal domain AL504_RS15620 cafae7ea7d64d244f94783128000593a 288 Gene3D G3DSA:1.10.3470.10 3 268 3.9E-35 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS15620 cafae7ea7d64d244f94783128000593a 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 263 5.2E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 SUPERFAMILY SSF51735 1 112 7.88E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Gene3D G3DSA:3.30.160.110 106 147 3.3E-16 T 28-03-2018 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 4.1E-17 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 297 330 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 SUPERFAMILY SSF75615 114 209 1.44E-24 T 28-03-2018 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 SUPERFAMILY SSF53790 215 458 1.31E-77 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Gene3D G3DSA:3.40.50.720 1 105 1.2E-17 T 28-03-2018 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 49.21 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 1.0E-89 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 428 1.3E-50 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Gene3D G3DSA:3.40.1010.10 216 341 5.2E-38 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 PIRSF PIRSF036426 1 468 4.4E-193 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Gene3D G3DSA:1.10.8.210 151 208 1.5E-16 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Gene3D G3DSA:3.30.950.10 342 466 5.8E-41 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.9E-70 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Pfam PF14824 Sirohaem biosynthesis protein central 124 145 1.1E-6 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS25675 6817fa67cef0717704057553d56e4342 471 Pfam PF13241 Putative NAD(P)-binding 6 115 7.7E-25 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 190 330 8.4E-40 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 104 1.4E-6 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 SMART SM01086 336 430 2.0E-19 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 405 6.3E-6 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 444 2.0E-201 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 SMART SM00382 51 333 5.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 Gene3D G3DSA:1.10.8.60 336 432 2.0E-27 T 28-03-2018 AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 444 42.475 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 Gene3D G3DSA:3.40.50.300 3 333 1.5E-48 T 28-03-2018 AL504_RS20540 bcfcf341d5421dd6be890777820fb8eb 444 SUPERFAMILY SSF52540 5 439 1.4E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18510 ac6124732019be33c743c166bf340414 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18510 ac6124732019be33c743c166bf340414 306 Pfam PF03466 LysR substrate binding domain 91 274 1.4E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS18510 ac6124732019be33c743c166bf340414 306 Gene3D G3DSA:1.10.10.10 1 84 2.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18510 ac6124732019be33c743c166bf340414 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18510 ac6124732019be33c743c166bf340414 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18510 ac6124732019be33c743c166bf340414 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18510 ac6124732019be33c743c166bf340414 306 Gene3D G3DSA:3.40.190.10 91 172 4.3E-13 T 28-03-2018 AL504_RS18510 ac6124732019be33c743c166bf340414 306 SUPERFAMILY SSF53850 91 278 4.89E-26 T 28-03-2018 AL504_RS18510 ac6124732019be33c743c166bf340414 306 SUPERFAMILY SSF46785 2 85 4.09E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18510 ac6124732019be33c743c166bf340414 306 Gene3D G3DSA:3.40.190.10 173 252 1.1E-12 T 28-03-2018 AL504_RS09150 d3d3a43eee3b45788da6379d6440e415 384 PIRSF PIRSF006004 4 375 1.8E-143 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS09150 d3d3a43eee3b45788da6379d6440e415 384 SUPERFAMILY SSF102114 104 332 1.96E-12 T 28-03-2018 AL504_RS09150 d3d3a43eee3b45788da6379d6440e415 384 Gene3D G3DSA:3.20.20.70 15 370 1.8E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS09150 d3d3a43eee3b45788da6379d6440e415 384 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 6 362 71.906 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS09150 d3d3a43eee3b45788da6379d6440e415 384 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 367 1.8E-132 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS09150 d3d3a43eee3b45788da6379d6440e415 384 Pfam PF04055 Radical SAM superfamily 110 290 1.1E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS19705 2ac68f37502901b673b9d1024c496f3a 205 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 7 205 31.7 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19705 2ac68f37502901b673b9d1024c496f3a 205 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 202 1.5E-70 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19705 2ac68f37502901b673b9d1024c496f3a 205 Gene3D G3DSA:3.40.1370.10 1 142 1.3E-44 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL504_RS19705 2ac68f37502901b673b9d1024c496f3a 205 Gene3D G3DSA:3.40.1370.10 143 203 6.4E-11 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL504_RS19705 2ac68f37502901b673b9d1024c496f3a 205 Pfam PF00573 Ribosomal protein L4/L1 family 18 202 2.7E-63 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AL504_RS19705 2ac68f37502901b673b9d1024c496f3a 205 SUPERFAMILY SSF52166 4 205 2.35E-69 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL504_RS19075 5c50618c0bc177eb0a58977c0d28ca4c 308 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 150 4.1E-34 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL504_RS19075 5c50618c0bc177eb0a58977c0d28ca4c 308 Gene3D G3DSA:1.10.1040.10 178 308 3.1E-29 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS19075 5c50618c0bc177eb0a58977c0d28ca4c 308 SUPERFAMILY SSF48179 178 302 7.48E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS19075 5c50618c0bc177eb0a58977c0d28ca4c 308 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 6 305 6.7E-60 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL504_RS19075 5c50618c0bc177eb0a58977c0d28ca4c 308 SUPERFAMILY SSF51735 1 132 6.47E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19075 5c50618c0bc177eb0a58977c0d28ca4c 308 Gene3D G3DSA:3.40.50.720 1 176 2.0E-28 T 28-03-2018 AL504_RS19075 5c50618c0bc177eb0a58977c0d28ca4c 308 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 301 1.9E-24 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL504_RS25425 6e6cabf509a528e288449c4646616b00 278 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 11 275 35.263 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL504_RS25425 6e6cabf509a528e288449c4646616b00 278 Pfam PF02634 FdhD/NarQ family 37 274 2.8E-78 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL504_RS25425 6e6cabf509a528e288449c4646616b00 278 SUPERFAMILY SSF53927 33 274 4.51E-81 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL504_RS25425 6e6cabf509a528e288449c4646616b00 278 PIRSF PIRSF015626 11 277 7.6E-81 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL504_RS25425 6e6cabf509a528e288449c4646616b00 278 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 275 4.8E-71 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL504_RS25425 6e6cabf509a528e288449c4646616b00 278 Gene3D G3DSA:3.40.140.10 141 278 6.2E-49 T 28-03-2018 AL504_RS25425 6e6cabf509a528e288449c4646616b00 278 Gene3D G3DSA:3.10.20.10 39 125 2.7E-21 T 28-03-2018 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 PIRSF PIRSF000498 1 212 6.4E-57 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 Pfam PF00677 Lumazine binding domain 101 186 5.6E-21 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 Pfam PF00677 Lumazine binding domain 3 88 2.3E-17 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 SUPERFAMILY SSF63380 94 201 1.53E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 SUPERFAMILY SSF63380 1 89 4.0E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 Gene3D G3DSA:2.40.30.20 1 90 4.3E-23 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 7.5E-56 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS06970 07f434a95ba5051b4d0743cf923c522f 234 Gene3D G3DSA:2.40.30.20 95 207 4.0E-25 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS06270 22910c904aa8963c0516b1437e0be5b8 245 Gene3D G3DSA:3.30.450.40 72 245 2.0E-31 T 28-03-2018 IPR029016 GAF domain-like AL504_RS06270 22910c904aa8963c0516b1437e0be5b8 245 Pfam PF01614 Bacterial transcriptional regulator 128 239 7.9E-16 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS06270 22910c904aa8963c0516b1437e0be5b8 245 SUPERFAMILY SSF46785 3 75 1.99E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06270 22910c904aa8963c0516b1437e0be5b8 245 Gene3D G3DSA:1.10.10.10 4 71 2.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06270 22910c904aa8963c0516b1437e0be5b8 245 Pfam PF09339 IclR helix-turn-helix domain 7 54 2.1E-7 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS06270 22910c904aa8963c0516b1437e0be5b8 245 SUPERFAMILY SSF55781 77 243 2.81E-34 T 28-03-2018 IPR029016 GAF domain-like AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 Gene3D G3DSA:1.20.120.30 55 219 1.1E-18 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 Gene3D G3DSA:1.10.287.950 356 551 1.5E-47 T 28-03-2018 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 Gene3D G3DSA:1.10.287.1060 271 355 0.22 T 28-03-2018 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 SUPERFAMILY SSF58104 267 548 4.19E-68 T 28-03-2018 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 Pfam PF02203 Tar ligand binding domain homologue 32 200 2.0E-17 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 SMART SM00304 247 299 7.6E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 360 513 6.0E-49 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 1.5E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 475 504 1.5E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 36 61 1.5E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 1.5E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 1.5E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 92 107 1.5E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 SMART SM00283 300 547 1.1E-83 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS04835 e2d8a397b04f636158a2dd6ea361af1d 601 Pfam PF00672 HAMP domain 247 295 1.0E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS19200 028b37ab11f3622e23ecd7efe4d309cb 312 SUPERFAMILY SSF51735 96 278 4.45E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19200 028b37ab11f3622e23ecd7efe4d309cb 312 SUPERFAMILY SSF52283 34 124 1.58E-7 T 28-03-2018 AL504_RS19200 028b37ab11f3622e23ecd7efe4d309cb 312 Gene3D G3DSA:3.40.50.720 108 278 4.9E-43 T 28-03-2018 AL504_RS19200 028b37ab11f3622e23ecd7efe4d309cb 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 277 7.2E-43 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS19200 028b37ab11f3622e23ecd7efe4d309cb 312 Gene3D G3DSA:3.40.50.720 6 107 3.2E-12 T 28-03-2018 AL504_RS16745 95dc86cc18f1bc5f3ce900afb3fc66d3 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16745 95dc86cc18f1bc5f3ce900afb3fc66d3 293 Gene3D G3DSA:3.40.190.10 178 265 7.1E-17 T 28-03-2018 AL504_RS16745 95dc86cc18f1bc5f3ce900afb3fc66d3 293 Gene3D G3DSA:1.10.10.10 1 81 4.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16745 95dc86cc18f1bc5f3ce900afb3fc66d3 293 SUPERFAMILY SSF53850 91 291 1.16E-30 T 28-03-2018 AL504_RS16745 95dc86cc18f1bc5f3ce900afb3fc66d3 293 SUPERFAMILY SSF46785 1 81 4.75E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16745 95dc86cc18f1bc5f3ce900afb3fc66d3 293 Gene3D G3DSA:3.40.190.10 88 177 3.5E-18 T 28-03-2018 AL504_RS16745 95dc86cc18f1bc5f3ce900afb3fc66d3 293 Pfam PF03466 LysR substrate binding domain 88 289 2.8E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS17595 8bf2246eca94d690e4ff4b03e8ec0b35 276 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 18 275 2.2E-90 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL504_RS17595 8bf2246eca94d690e4ff4b03e8ec0b35 276 Gene3D G3DSA:3.20.20.60 2 275 8.4E-77 T 28-03-2018 AL504_RS17595 8bf2246eca94d690e4ff4b03e8ec0b35 276 PIRSF PIRSF000388 7 276 2.6E-99 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL504_RS17595 8bf2246eca94d690e4ff4b03e8ec0b35 276 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 17 275 39.291 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL504_RS17595 8bf2246eca94d690e4ff4b03e8ec0b35 276 Pfam PF02548 Ketopantoate hydroxymethyltransferase 16 270 2.1E-101 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL504_RS17595 8bf2246eca94d690e4ff4b03e8ec0b35 276 SUPERFAMILY SSF51621 16 275 3.45E-93 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 Gene3D G3DSA:3.40.50.2300 217 353 4.2E-15 T 28-03-2018 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 SUPERFAMILY SSF53822 27 367 5.38E-89 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 91 101 4.5E-32 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 4.5E-32 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 4.5E-32 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 4.5E-32 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 4.5E-32 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 4.5E-32 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 4.5E-32 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 Gene3D G3DSA:3.40.50.2300 26 216 2.4E-41 T 28-03-2018 AL504_RS04595 b3065d9d07dc06124d2d137f89d04bed 371 Pfam PF13458 Periplasmic binding protein 28 366 2.8E-57 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS18935 3aac4d92c317cd1f453c0ddc84fec9d6 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 5.9E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS18935 3aac4d92c317cd1f453c0ddc84fec9d6 191 Gene3D G3DSA:1.10.10.60 47 169 8.5E-8 T 28-03-2018 AL504_RS18935 3aac4d92c317cd1f453c0ddc84fec9d6 191 Gene3D G3DSA:1.10.10.60 1 46 6.0E-16 T 28-03-2018 AL504_RS18935 3aac4d92c317cd1f453c0ddc84fec9d6 191 SUPERFAMILY SSF46689 4 74 2.26E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS18935 3aac4d92c317cd1f453c0ddc84fec9d6 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.0E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS18935 3aac4d92c317cd1f453c0ddc84fec9d6 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.0E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 Pfam PF04679 ATP dependent DNA ligase C terminal region 429 518 5.6E-9 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 SUPERFAMILY SSF56091 206 408 3.36E-55 T 28-03-2018 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 Gene3D G3DSA:3.30.1490.70 343 409 6.4E-21 T 28-03-2018 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 SUPERFAMILY SSF50249 413 532 4.11E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 Gene3D G3DSA:3.30.470.30 152 342 3.3E-30 T 28-03-2018 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 532 1.7E-181 T 28-03-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 Gene3D G3DSA:2.40.50.140 412 534 7.7E-23 T 28-03-2018 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 Pfam PF04675 DNA ligase N terminus 3 166 7.0E-18 T 28-03-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 Pfam PF01068 ATP dependent DNA ligase domain 227 408 3.7E-33 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 232 240 - T 28-03-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AL504_RS24220 4c332c9425f86241f50c73a986f9d6bd 534 SUPERFAMILY SSF117018 4 172 4.58E-5 T 28-03-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Gene3D G3DSA:1.10.8.60 370 574 4.2E-37 T 28-03-2018 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 SMART SM01086 798 891 2.8E-10 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 SUPERFAMILY SSF52540 573 871 1.11E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 74 2.2E-4 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 799 872 7.4E-10 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 882 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 320 332 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 SUPERFAMILY SSF81923 11 128 1.44E-17 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Pfam PF07724 AAA domain (Cdc48 subfamily) 623 792 2.8E-43 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Gene3D G3DSA:3.40.50.300 579 797 6.4E-42 T 28-03-2018 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Gene3D G3DSA:3.40.50.300 183 368 8.7E-24 T 28-03-2018 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 702 720 2.6E-34 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 628 646 2.6E-34 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 2.6E-34 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 735 749 2.6E-34 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Gene3D G3DSA:1.10.8.60 799 891 5.0E-11 T 28-03-2018 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 SUPERFAMILY SSF52540 185 570 1.43E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Gene3D G3DSA:1.10.1780.10 2 163 9.2E-27 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 SMART SM00382 224 369 2.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 SMART SM00382 624 766 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS01945 11efa70a4ca3920cfc020166f2e497b1 894 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 229 341 5.4E-9 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 SUPERFAMILY SSF53850 95 304 6.52E-35 T 28-03-2018 AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 Gene3D G3DSA:3.40.190.10 97 188 2.4E-23 T 28-03-2018 AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 Pfam PF03466 LysR substrate binding domain 94 301 2.2E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 SUPERFAMILY SSF46785 8 112 4.79E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 Gene3D G3DSA:3.40.190.10 189 273 4.4E-12 T 28-03-2018 AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 Gene3D G3DSA:1.10.10.10 4 90 4.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29925 24c08f2d7eadd93ac84824b54bb18f28 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27665 4ceed568d77fd6f5344a30c158234c21 211 Gene3D G3DSA:3.90.1530.10 44 153 6.6E-12 T 28-03-2018 AL504_RS27665 4ceed568d77fd6f5344a30c158234c21 211 SUPERFAMILY SSF110849 50 182 5.41E-19 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS27665 4ceed568d77fd6f5344a30c158234c21 211 SMART SM00470 52 150 5.1E-4 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS27665 4ceed568d77fd6f5344a30c158234c21 211 Pfam PF02195 ParB-like nuclease domain 53 127 3.4E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS05400 455678c2a0b143e99a82a1b2fb2457f9 328 PIRSF PIRSF031982 1 322 4.4E-91 T 28-03-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL AL504_RS05400 455678c2a0b143e99a82a1b2fb2457f9 328 Gene3D G3DSA:3.40.50.1820 26 326 1.2E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS05400 455678c2a0b143e99a82a1b2fb2457f9 328 SUPERFAMILY SSF53474 2 190 6.03E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS05400 455678c2a0b143e99a82a1b2fb2457f9 328 SUPERFAMILY SSF53474 226 315 6.03E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27790 029da3a95a05a9e76eeb2aaf3b0b6361 208 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 125 6.3E-17 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS27790 029da3a95a05a9e76eeb2aaf3b0b6361 208 SUPERFAMILY SSF50475 26 173 2.55E-23 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS27790 029da3a95a05a9e76eeb2aaf3b0b6361 208 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 14 208 2.2E-82 T 28-03-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent AL504_RS27790 029da3a95a05a9e76eeb2aaf3b0b6361 208 Gene3D G3DSA:2.30.110.10 25 178 1.0E-32 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 SUPERFAMILY SSF52413 303 419 1.15E-29 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 SUPERFAMILY SSF48179 201 293 5.27E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 417 5.8E-20 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 181 3.7E-33 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 Gene3D G3DSA:3.40.50.720 225 422 3.7E-57 T 28-03-2018 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 Gene3D G3DSA:1.20.5.170 202 224 1.9E-11 T 28-03-2018 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 SMART SM00984 318 418 5.4E-36 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 4.1E-24 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 411 1.4E-120 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 Gene3D G3DSA:3.40.50.720 5 200 7.7E-40 T 28-03-2018 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 PIRSF PIRSF500136 2 425 1.1E-151 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 SUPERFAMILY SSF51735 8 192 4.86E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23100 4b3faba64b0b3ef150f78d0492fbc322 425 PIRSF PIRSF000124 7 422 1.4E-54 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL504_RS15265 f1893e5986bf81bdc4d07b3e502f15ff 111 Pfam PF01740 STAS domain 4 106 2.2E-18 T 28-03-2018 IPR002645 STAS domain AL504_RS15265 f1893e5986bf81bdc4d07b3e502f15ff 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 103 5.8E-23 T 28-03-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AL504_RS15265 f1893e5986bf81bdc4d07b3e502f15ff 111 SUPERFAMILY SSF52091 1 108 2.35E-25 T 28-03-2018 IPR002645 STAS domain AL504_RS15265 f1893e5986bf81bdc4d07b3e502f15ff 111 Gene3D G3DSA:3.30.750.24 1 111 6.5E-23 T 28-03-2018 IPR002645 STAS domain AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 3.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 3.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 3.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 3.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 Gene3D G3DSA:3.40.50.720 7 234 3.0E-53 T 28-03-2018 AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 230 3.7E-35 T 28-03-2018 AL504_RS00590 1c1ef1c415fed0ce784cde925cb90158 234 SUPERFAMILY SSF51735 9 232 2.86E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23130 2bb3bd1182f1e1c803497d73ea5217f6 380 SUPERFAMILY SSF53756 2 375 3.61E-68 T 28-03-2018 AL504_RS23130 2bb3bd1182f1e1c803497d73ea5217f6 380 Pfam PF13439 Glycosyltransferase Family 4 13 175 4.8E-12 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS23130 2bb3bd1182f1e1c803497d73ea5217f6 380 Gene3D G3DSA:3.40.50.2000 182 359 4.6E-40 T 28-03-2018 AL504_RS23130 2bb3bd1182f1e1c803497d73ea5217f6 380 Gene3D G3DSA:3.40.50.2000 2 181 3.1E-17 T 28-03-2018 AL504_RS23130 2bb3bd1182f1e1c803497d73ea5217f6 380 Pfam PF13692 Glycosyl transferases group 1 197 337 9.1E-26 T 28-03-2018 AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 SUPERFAMILY SSF46785 3 82 6.43E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 Gene3D G3DSA:3.40.190.10 94 198 1.5E-11 T 28-03-2018 AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 SUPERFAMILY SSF53850 97 297 6.52E-15 T 28-03-2018 AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 Pfam PF03466 LysR substrate binding domain 97 293 6.2E-13 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22195 e32f4bb47afa024fe3adbd3cf3276ccc 309 Gene3D G3DSA:1.10.10.10 1 88 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 SUPERFAMILY SSF53850 90 295 1.19E-35 T 28-03-2018 AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 Gene3D G3DSA:1.10.10.10 1 83 1.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 SUPERFAMILY SSF46785 6 111 1.71E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 Gene3D G3DSA:3.40.190.10 89 175 6.6E-21 T 28-03-2018 AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 9.7E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 Pfam PF03466 LysR substrate binding domain 89 294 1.3E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 Gene3D G3DSA:3.40.190.10 176 267 1.5E-16 T 28-03-2018 AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16810 0b1ffcd8ed4c8ab9d959befa05745f3f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 SUPERFAMILY SSF51735 5 158 1.79E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 SUPERFAMILY SSF56327 160 328 5.87E-60 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 160 324 5.6E-31 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 PIRSF PIRSF000102 2 328 2.1E-64 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 Gene3D G3DSA:3.90.110.10 159 326 9.3E-49 T 28-03-2018 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 155 7.1E-38 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 Gene3D G3DSA:3.40.50.720 7 158 7.6E-28 T 28-03-2018 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 5 322 6.3E-144 T 28-03-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AL504_RS11780 f9eb45c7c05ad4bd06668f95bf1833ff 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 328 56.973 T 28-03-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 Gene3D G3DSA:3.40.50.720 1 201 2.0E-31 T 28-03-2018 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 194 333 1.1E-44 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 9 335 34.957 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 Gene3D G3DSA:1.10.1040.10 203 348 6.4E-47 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 SUPERFAMILY SSF51735 9 194 2.93E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 PIRSF PIRSF000114 6 345 5.1E-94 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 SUPERFAMILY SSF48179 194 344 2.55E-48 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 11 173 1.7E-39 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 202 223 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 147 167 1.1E-36 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 187 211 1.1E-36 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 252 269 1.1E-36 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 13 30 1.1E-36 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS21365 aa1f36efae17f68500f0d06239a3bcfd 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 212 236 1.1E-36 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 28-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 Gene3D G3DSA:3.40.50.9100 1 144 3.3E-64 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 144 70.708 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 PIRSF PIRSF001399 1 144 6.3E-57 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 Pfam PF01220 Dehydroquinase class II 4 141 4.9E-59 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 SUPERFAMILY SSF52304 4 143 5.89E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 143 1.0E-57 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS15800 83a53391079b479dd3c7974e6d338a58 144 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 141 1.0E-63 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS30995 f670a7b6da4123a06566fc37dc0f48ee 257 SUPERFAMILY SSF54001 115 255 9.81E-10 T 28-03-2018 AL504_RS30995 f670a7b6da4123a06566fc37dc0f48ee 257 Gene3D G3DSA:3.40.140.10 1 114 2.2E-13 T 28-03-2018 AL504_RS30995 f670a7b6da4123a06566fc37dc0f48ee 257 SUPERFAMILY SSF102712 130 144 1.44E-20 T 28-03-2018 AL504_RS30995 f670a7b6da4123a06566fc37dc0f48ee 257 SUPERFAMILY SSF102712 2 101 1.44E-20 T 28-03-2018 AL504_RS30995 f670a7b6da4123a06566fc37dc0f48ee 257 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 3.1E-18 T 28-03-2018 IPR028090 JAB domain, prokaryotic AL504_RS30995 f670a7b6da4123a06566fc37dc0f48ee 257 Pfam PF00877 NlpC/P60 family 124 254 1.7E-12 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL504_RS30995 f670a7b6da4123a06566fc37dc0f48ee 257 SMART SM00232 1 110 0.0037 T 28-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 Gene3D G3DSA:3.40.1060.10 155 288 2.1E-42 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 108 116 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 133 148 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 209 222 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 400 413 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 195 208 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 82 95 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 119 132 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 343 354 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 PRINTS PR00415 Aconitase family signature 286 300 8.6E-49 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 Gene3D G3DSA:3.30.499.10 325 467 9.1E-52 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 466 1.2E-238 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 SUPERFAMILY SSF53732 2 466 1.02E-165 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 60.446 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 7.2E-160 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS08610 e770225b8546cadc19750a81cfce8374 467 Gene3D G3DSA:3.30.499.10 1 154 1.5E-41 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS22810 1c72833060926695cb37a1ce6265eb21 298 Pfam PF03466 LysR substrate binding domain 88 293 7.4E-51 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22810 1c72833060926695cb37a1ce6265eb21 298 SUPERFAMILY SSF46785 4 88 1.12E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22810 1c72833060926695cb37a1ce6265eb21 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22810 1c72833060926695cb37a1ce6265eb21 298 Gene3D G3DSA:1.10.10.10 3 84 2.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22810 1c72833060926695cb37a1ce6265eb21 298 Gene3D G3DSA:3.40.190.10 177 263 3.4E-28 T 28-03-2018 AL504_RS22810 1c72833060926695cb37a1ce6265eb21 298 SUPERFAMILY SSF53850 88 296 1.9E-51 T 28-03-2018 AL504_RS22810 1c72833060926695cb37a1ce6265eb21 298 Gene3D G3DSA:3.40.190.10 88 176 5.5E-13 T 28-03-2018 AL504_RS12625 8aff2bdf13ab16474571783f7537ff7e 212 SUPERFAMILY SSF48498 81 174 2.03E-8 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS12625 8aff2bdf13ab16474571783f7537ff7e 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12625 8aff2bdf13ab16474571783f7537ff7e 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12625 8aff2bdf13ab16474571783f7537ff7e 212 SUPERFAMILY SSF46689 1 71 1.54E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS12625 8aff2bdf13ab16474571783f7537ff7e 212 Gene3D G3DSA:1.10.357.10 1 210 8.0E-39 T 28-03-2018 AL504_RS12625 8aff2bdf13ab16474571783f7537ff7e 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 92 173 3.2E-9 T 28-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AL504_RS12625 8aff2bdf13ab16474571783f7537ff7e 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 4.2E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12755 91ec773630d58e214114a8f1a04ffc95 303 Pfam PF05661 Protein of unknown function (DUF808) 4 293 2.7E-111 T 28-03-2018 IPR008526 Inner membrane protein YedI AL504_RS12755 91ec773630d58e214114a8f1a04ffc95 303 PIRSF PIRSF016660 1 303 1.5E-118 T 28-03-2018 IPR008526 Inner membrane protein YedI AL504_RS28050 604eaf4caba362cd7abd4a25aba9b92a 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 147 1.3E-29 T 28-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AL504_RS28050 604eaf4caba362cd7abd4a25aba9b92a 149 TIGRFAM TIGR02695 azurin: azurin 23 147 3.3E-60 T 28-03-2018 IPR014068 Azurin AL504_RS28050 604eaf4caba362cd7abd4a25aba9b92a 149 SUPERFAMILY SSF49503 22 147 3.03E-45 T 28-03-2018 IPR008972 Cupredoxin AL504_RS28050 604eaf4caba362cd7abd4a25aba9b92a 149 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 125 141 - T 28-03-2018 IPR028871 Blue (type 1) copper protein, binding site AL504_RS28050 604eaf4caba362cd7abd4a25aba9b92a 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 148 3.0E-66 T 28-03-2018 AL504_RS28050 604eaf4caba362cd7abd4a25aba9b92a 149 Gene3D G3DSA:2.60.40.420 21 147 1.9E-12 T 28-03-2018 IPR008972 Cupredoxin AL504_RS07515 909f86f690d05454c025f8d424df7f37 151 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 32.985 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL504_RS07515 909f86f690d05454c025f8d424df7f37 151 SUPERFAMILY SSF82093 29 134 1.83E-38 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL504_RS07515 909f86f690d05454c025f8d424df7f37 151 Gene3D G3DSA:2.40.50.140 26 122 1.1E-33 T 28-03-2018 AL504_RS07515 909f86f690d05454c025f8d424df7f37 151 Pfam PF03100 CcmE 4 128 1.1E-46 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 Gene3D G3DSA:2.170.130.10 131 292 4.1E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 178 819 3.9E-115 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 Gene3D G3DSA:2.40.170.20 294 819 1.3E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 802 819 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 SUPERFAMILY SSF56935 132 819 1.26E-111 T 28-03-2018 AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 Pfam PF07715 TonB-dependent Receptor Plug Domain 176 278 1.6E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 Pfam PF00593 TonB dependent receptor 392 817 2.4E-43 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24810 8520edddcd9123d26854ee30481b3934 819 SMART SM00965 78 129 1.7E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS14150 3496d0cc83801ee00925197500e95187 467 Pfam PF13520 Amino acid permease 26 422 6.1E-50 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS14150 3496d0cc83801ee00925197500e95187 467 PIRSF PIRSF006060 1 467 5.3E-81 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 Gene3D G3DSA:3.40.50.720 143 249 2.3E-18 T 28-03-2018 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 5.6E-165 T 28-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 Gene3D G3DSA:3.90.180.10 250 336 0.014 T 28-03-2018 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 90 6.1E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 SUPERFAMILY SSF51735 117 286 9.17E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 Gene3D G3DSA:3.90.180.10 1 142 1.9E-33 T 28-03-2018 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 3.7E-21 T 28-03-2018 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 SMART SM00829 13 334 2.4E-11 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS27860 71fbc4e1ad108fb5dc0e787bcf58de2a 337 SUPERFAMILY SSF50129 15 144 1.13E-32 T 28-03-2018 IPR011032 GroES-like AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 ProSitePatterns PS00398 Site-specific recombinases signature 2. 71 83 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 Pfam PF00239 Resolvase, N terminal domain 14 166 7.9E-23 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 Gene3D G3DSA:3.40.50.1390 7 169 1.6E-35 T 28-03-2018 AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 Gene3D G3DSA:1.10.10.60 170 211 8.2E-5 T 28-03-2018 AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 Pfam PF02796 Helix-turn-helix domain of resolvase 177 209 1.3E-5 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 ProSitePatterns PS00397 Site-specific recombinases active site. 16 24 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 SUPERFAMILY SSF53041 11 166 2.62E-27 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL504_RS00065 52ee172122b415359ef7b4a08ff37583 301 SMART SM00857 13 166 8.8E-31 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 Gene3D G3DSA:1.10.10.10 4 73 1.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 SUPERFAMILY SSF48008 84 215 1.41E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 SMART SM00345 19 77 4.2E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 Gene3D G3DSA:1.20.120.530 74 221 1.1E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 SMART SM00895 87 208 3.8E-18 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 Pfam PF07729 FCD domain 87 207 2.7E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 2.9E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS05115 b0f16e38724fa6701405a197ce1c19d6 228 SUPERFAMILY SSF46785 10 101 2.82E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 104 129 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 Pfam PF13378 Enolase C-terminal domain-like 152 365 2.1E-49 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 SMART SM00922 147 245 1.3E-19 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 Gene3D G3DSA:3.20.20.120 134 374 7.9E-59 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 Gene3D G3DSA:3.30.390.10 1 133 5.9E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 11 129 7.3E-31 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 SUPERFAMILY SSF51604 117 373 5.11E-65 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 6 373 6.4E-172 T 28-03-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 195 226 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AL504_RS02860 718aa537bfe8dc7a005d20a6ed0f6dab 374 SUPERFAMILY SSF54826 5 130 1.47E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS28665 6ddaeb9193554ac797d59bc3037ddec2 234 Gene3D G3DSA:1.20.1000.10 37 231 6.3E-4 T 28-03-2018 AL504_RS28665 6ddaeb9193554ac797d59bc3037ddec2 234 Pfam PF11180 Protein of unknown function (DUF2968) 43 222 1.2E-68 T 28-03-2018 IPR021350 Protein of unknown function DUF2968 AL504_RS22410 d7e8ed1fb9da23dea788fc0bb1943099 347 SUPERFAMILY SSF51735 12 336 5.27E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS22410 d7e8ed1fb9da23dea788fc0bb1943099 347 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 255 2.4E-43 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS22410 d7e8ed1fb9da23dea788fc0bb1943099 347 Gene3D G3DSA:3.40.50.720 13 341 1.2E-61 T 28-03-2018 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 PRINTS PR00974 Ribosomal protein S18 family signature 53 60 6.3E-15 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 PRINTS PR00974 Ribosomal protein S18 family signature 61 75 6.3E-15 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 PRINTS PR00974 Ribosomal protein S18 family signature 43 53 6.3E-15 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 PRINTS PR00974 Ribosomal protein S18 family signature 75 85 6.3E-15 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 TIGRFAM TIGR00165 S18: ribosomal protein bS18 20 87 6.2E-33 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 SUPERFAMILY SSF46911 14 89 1.57E-27 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 36 85 7.0E-22 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 ProSitePatterns PS00057 Ribosomal protein S18 signature. 36 59 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 88 20.184 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 Pfam PF01084 Ribosomal protein S18 34 83 2.2E-22 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10880 00a1d4e325050f9a9ee2e93040ab8e38 90 Gene3D G3DSA:4.10.640.10 4 90 3.5E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS07175 a03af3b6a78a224b249e6e005fe2ba7a 266 Pfam PF05013 N-formylglutamate amidohydrolase 12 230 3.3E-71 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase AL504_RS07175 a03af3b6a78a224b249e6e005fe2ba7a 266 SUPERFAMILY SSF53187 4 258 1.98E-79 T 28-03-2018 AL504_RS07175 a03af3b6a78a224b249e6e005fe2ba7a 266 Gene3D G3DSA:3.40.630.40 2 265 1.6E-80 T 28-03-2018 AL504_RS07175 a03af3b6a78a224b249e6e005fe2ba7a 266 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 259 4.8E-101 T 28-03-2018 IPR010247 N-formylglutamate deformylase AL504_RS27650 8306b4daa5e5336cd46163a45a9cf7bb 265 Pfam PF01925 Sulfite exporter TauE/SafE 6 260 6.1E-41 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 Gene3D G3DSA:3.40.190.10 179 263 7.0E-17 T 28-03-2018 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 SUPERFAMILY SSF46785 1 86 2.14E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 Pfam PF03466 LysR substrate binding domain 87 291 6.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.0E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 SUPERFAMILY SSF53850 89 292 1.63E-36 T 28-03-2018 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 Gene3D G3DSA:3.40.190.10 84 178 3.7E-23 T 28-03-2018 AL504_RS10085 c6bdefd88726ccd0edc570bd179c7d91 305 Gene3D G3DSA:1.10.10.10 1 83 5.8E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10635 62ebf99ffae9e76f269a36ae41b46daa 132 Gene3D G3DSA:2.60.120.10 7 125 5.1E-19 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS10635 62ebf99ffae9e76f269a36ae41b46daa 132 SUPERFAMILY SSF51182 20 117 1.61E-27 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS10635 62ebf99ffae9e76f269a36ae41b46daa 132 Pfam PF12973 ChrR Cupin-like domain 28 113 3.3E-18 T 28-03-2018 IPR025979 ChrR-like cupin domain AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 Gene3D G3DSA:1.10.3210.10 225 410 9.5E-21 T 28-03-2018 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 SMART SM00421 418 475 2.9E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 Gene3D G3DSA:1.10.3210.10 15 208 1.6E-14 T 28-03-2018 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 435 451 5.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 421 435 5.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 451 463 5.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 Pfam PF00196 Bacterial regulatory proteins, luxR family 420 474 2.1E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 Pfam PF13487 HD domain 296 358 1.2E-12 T 28-03-2018 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 SUPERFAMILY SSF46894 411 480 1.12E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 Gene3D G3DSA:1.10.10.10 411 481 2.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28900 25ae0c28026bf9649da3b7446e4de080 481 SUPERFAMILY SSF109604 246 402 1.26E-10 T 28-03-2018 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 Gene3D G3DSA:3.40.190.10 178 266 1.6E-15 T 28-03-2018 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 Pfam PF03466 LysR substrate binding domain 87 288 3.2E-32 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 Gene3D G3DSA:3.40.190.10 93 177 2.0E-18 T 28-03-2018 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.7E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 SUPERFAMILY SSF46785 1 111 2.12E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 SUPERFAMILY SSF53850 89 284 2.88E-32 T 28-03-2018 AL504_RS29865 3bf11a9cad1e34a4f3a47d2a649a09f3 295 Gene3D G3DSA:1.10.10.10 1 92 3.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00535 e34dcd65713f346ee64ee7cbef710faa 242 SUPERFAMILY SSF53850 43 241 5.61E-35 T 28-03-2018 AL504_RS00535 e34dcd65713f346ee64ee7cbef710faa 242 Gene3D G3DSA:3.40.190.10 42 129 4.0E-13 T 28-03-2018 AL504_RS00535 e34dcd65713f346ee64ee7cbef710faa 242 Gene3D G3DSA:3.40.190.10 130 212 2.5E-17 T 28-03-2018 AL504_RS00535 e34dcd65713f346ee64ee7cbef710faa 242 Pfam PF03466 LysR substrate binding domain 41 240 3.6E-32 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 Pfam PF01614 Bacterial transcriptional regulator 129 255 9.3E-35 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 Gene3D G3DSA:3.30.450.40 81 260 1.3E-55 T 28-03-2018 IPR029016 GAF domain-like AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 SUPERFAMILY SSF55781 78 257 3.01E-51 T 28-03-2018 IPR029016 GAF domain-like AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 Gene3D G3DSA:1.10.10.10 5 80 2.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 Pfam PF09339 IclR helix-turn-helix domain 18 64 5.3E-14 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 11 257 3.2E-106 T 28-03-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 SMART SM00346 14 102 9.4E-26 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS21845 feae4fc6a0bfae9079e97062d928c644 260 SUPERFAMILY SSF46785 14 85 7.08E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10065 1fa65d87636ee8fa97b7408765b2f1d4 187 Gene3D G3DSA:3.30.70.100 90 185 1.4E-8 T 28-03-2018 AL504_RS30835 3b75af637310d73aa8da29e4f64308d9 412 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 49 3.8E-7 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS30835 3b75af637310d73aa8da29e4f64308d9 412 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 228 357 4.4E-20 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS30835 3b75af637310d73aa8da29e4f64308d9 412 SUPERFAMILY SSF52540 1 154 6.08E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30835 3b75af637310d73aa8da29e4f64308d9 412 SUPERFAMILY SSF52540 236 386 6.08E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30835 3b75af637310d73aa8da29e4f64308d9 412 Gene3D G3DSA:3.40.50.300 1 371 8.8E-29 T 28-03-2018 AL504_RS30835 3b75af637310d73aa8da29e4f64308d9 412 PIRSF PIRSF029347 3 393 2.3E-40 T 28-03-2018 IPR014555 RecF-like AL504_RS27640 e416c649155684fa3611275bcfbcda7d 829 SUPERFAMILY SSF141729 22 144 9.29E-23 T 28-03-2018 AL504_RS27640 e416c649155684fa3611275bcfbcda7d 829 Pfam PF00577 Outer membrane usher protein 185 741 4.9E-160 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AL504_RS27640 e416c649155684fa3611275bcfbcda7d 829 Pfam PF13953 PapC C-terminal domain 753 812 9.8E-12 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AL504_RS27640 e416c649155684fa3611275bcfbcda7d 829 Pfam PF13954 PapC N-terminal domain 23 167 3.1E-35 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AL504_RS03485 db7f5d1f91a0c93cd5922a079b9b2333 288 Gene3D G3DSA:3.40.50.300 5 229 7.3E-59 T 28-03-2018 AL504_RS03485 db7f5d1f91a0c93cd5922a079b9b2333 288 SMART SM00382 40 233 1.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03485 db7f5d1f91a0c93cd5922a079b9b2333 288 Pfam PF00005 ABC transporter 31 170 2.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03485 db7f5d1f91a0c93cd5922a079b9b2333 288 SUPERFAMILY SSF52540 10 245 5.47E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03485 db7f5d1f91a0c93cd5922a079b9b2333 288 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23930 7d19182c0f1fefc27fda0087ec51d995 321 Gene3D G3DSA:1.10.10.10 6 99 6.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23930 7d19182c0f1fefc27fda0087ec51d995 321 Gene3D G3DSA:3.40.190.10 195 282 5.3E-11 T 28-03-2018 AL504_RS23930 7d19182c0f1fefc27fda0087ec51d995 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 3.4E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23930 7d19182c0f1fefc27fda0087ec51d995 321 Gene3D G3DSA:3.40.190.10 104 194 1.2E-15 T 28-03-2018 AL504_RS23930 7d19182c0f1fefc27fda0087ec51d995 321 SUPERFAMILY SSF53850 101 310 7.48E-27 T 28-03-2018 AL504_RS23930 7d19182c0f1fefc27fda0087ec51d995 321 Pfam PF03466 LysR substrate binding domain 100 309 2.0E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS23930 7d19182c0f1fefc27fda0087ec51d995 321 SUPERFAMILY SSF46785 13 123 9.42E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 SUPERFAMILY SSF52172 2 105 1.24E-18 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 Pfam PF01339 CheB methylesterase 158 333 1.6E-55 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 SMART SM00448 1 116 6.9E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 Gene3D G3DSA:3.40.50.2300 1 127 4.7E-22 T 28-03-2018 AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 SUPERFAMILY SSF52738 153 336 3.92E-60 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 338 31.062 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 Gene3D G3DSA:3.40.50.180 145 338 1.7E-67 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 Pfam PF00072 Response regulator receiver domain 4 100 8.0E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS01555 32786d6be9e8d5ed766b70fab4fdb908 338 PIRSF PIRSF000876 1 338 2.1E-97 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS23585 9c8a01c598c2ae01e899600781500c8f 332 Gene3D G3DSA:3.40.50.720 132 291 2.3E-22 T 28-03-2018 AL504_RS23585 9c8a01c598c2ae01e899600781500c8f 332 Gene3D G3DSA:3.30.1780.10 6 131 2.8E-22 T 28-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL504_RS23585 9c8a01c598c2ae01e899600781500c8f 332 PIRSF PIRSF001439 1 319 1.7E-53 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS23585 9c8a01c598c2ae01e899600781500c8f 332 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 9 309 2.1E-42 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS23585 9c8a01c598c2ae01e899600781500c8f 332 SUPERFAMILY SSF51735 6 316 7.65E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 SUPERFAMILY SSF55658 1 56 2.62E-18 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 Gene3D G3DSA:3.40.5.10 1 49 3.2E-23 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.385 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 SUPERFAMILY SSF55653 59 148 2.22E-22 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 5.1E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 3.7E-23 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 Gene3D G3DSA:3.10.430.100 63 148 7.1E-23 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10875 aea3e21ad99bd98c758091eb7f5f6d47 151 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 2.2E-41 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 PIRSF PIRSF000722 1 394 2.2E-130 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 PRINTS PR00471 Acetate kinase family signature 205 226 6.9E-37 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 PRINTS PR00471 Acetate kinase family signature 176 189 6.9E-37 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 PRINTS PR00471 Acetate kinase family signature 298 311 6.9E-37 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 PRINTS PR00471 Acetate kinase family signature 320 336 6.9E-37 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 PRINTS PR00471 Acetate kinase family signature 372 384 6.9E-37 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 PRINTS PR00471 Acetate kinase family signature 5 16 6.9E-37 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 SUPERFAMILY SSF53067 4 198 2.46E-56 T 28-03-2018 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 Pfam PF00871 Acetokinase family 5 385 1.3E-99 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 SUPERFAMILY SSF53067 161 391 8.35E-72 T 28-03-2018 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 150.544 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 Gene3D G3DSA:3.30.420.40 4 198 7.2E-60 T 28-03-2018 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 Gene3D G3DSA:3.30.420.40 199 394 1.2E-64 T 28-03-2018 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 TIGRFAM TIGR00016 ackA: acetate kinase 2 391 5.4E-100 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS25795 a5d61ad56e17ea22ad86f86449cbe776 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL504_RS10745 30c2ad2da9a0c70ab592c8339c179a30 69 Pfam PF11381 Protein of unknown function (DUF3185) 2 61 3.4E-5 T 28-03-2018 IPR021521 Protein of unknown function DUF3185 AL504_RS02250 324eff760be6753c80e754722a9694ce 256 SUPERFAMILY SSF51556 1 253 4.54E-89 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS02250 324eff760be6753c80e754722a9694ce 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL504_RS02250 324eff760be6753c80e754722a9694ce 256 PIRSF PIRSF005902 1 256 1.4E-79 T 28-03-2018 IPR001130 TatD family GO:0016788 AL504_RS02250 324eff760be6753c80e754722a9694ce 256 Gene3D G3DSA:3.20.20.140 1 256 1.1E-85 T 28-03-2018 AL504_RS02250 324eff760be6753c80e754722a9694ce 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL504_RS02250 324eff760be6753c80e754722a9694ce 256 Pfam PF01026 TatD related DNase 3 252 7.9E-79 T 28-03-2018 IPR001130 TatD family GO:0016788 AL504_RS02250 324eff760be6753c80e754722a9694ce 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 5.0E-83 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 16 403 1.5E-179 T 28-03-2018 IPR023922 Sulphate-starvation-induced SfnB AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 Gene3D G3DSA:1.10.540.10 18 129 2.1E-18 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 SUPERFAMILY SSF47203 243 397 4.03E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 Gene3D G3DSA:1.20.140.10 238 404 1.1E-21 T 28-03-2018 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 380 3.4E-20 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 141 221 4.2E-9 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 PIRSF PIRSF016578 17 398 2.8E-34 T 28-03-2018 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 Gene3D G3DSA:2.40.110.10 134 230 1.4E-17 T 28-03-2018 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 SUPERFAMILY SSF56645 26 228 5.24E-47 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS17335 d0e25778dfbba54f4c8018d0f5c12734 405 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 127 4.1E-11 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS12885 3089e9a9b278e2bc01b8452e111e5744 175 Pfam PF04542 Sigma-70 region 2 15 83 1.8E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12885 3089e9a9b278e2bc01b8452e111e5744 175 Gene3D G3DSA:1.10.10.10 82 168 3.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12885 3089e9a9b278e2bc01b8452e111e5744 175 Pfam PF08281 Sigma-70, region 4 115 167 8.4E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12885 3089e9a9b278e2bc01b8452e111e5744 175 SUPERFAMILY SSF88946 11 102 1.45E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12885 3089e9a9b278e2bc01b8452e111e5744 175 SUPERFAMILY SSF88659 108 167 1.37E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12885 3089e9a9b278e2bc01b8452e111e5744 175 Gene3D G3DSA:1.10.1740.10 2 81 3.3E-17 T 28-03-2018 AL504_RS12885 3089e9a9b278e2bc01b8452e111e5744 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 168 7.5E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 Gene3D G3DSA:3.40.1020.10 328 502 6.8E-75 T 28-03-2018 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 SUPERFAMILY SSF53686 5 355 3.4E-102 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 SUPERFAMILY SSF55021 409 502 3.89E-28 T 28-03-2018 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 414 502 1.2E-22 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 408 3.3E-27 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 Gene3D G3DSA:3.40.50.1100 138 312 9.4E-52 T 28-03-2018 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 Gene3D G3DSA:3.40.50.1100 27 137 5.3E-33 T 28-03-2018 AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 306 4.7E-82 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS21200 b48af88d6f98c5481c62d680bb7ed377 502 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 502 8.9E-254 T 28-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL504_RS15805 61e00fbf99aeadd71b2e7a01ba997314 181 Gene3D G3DSA:3.40.30.10 24 181 1.1E-29 T 28-03-2018 AL504_RS15805 61e00fbf99aeadd71b2e7a01ba997314 181 SUPERFAMILY SSF52833 1 176 1.85E-33 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS15805 61e00fbf99aeadd71b2e7a01ba997314 181 Pfam PF08534 Redoxin 40 168 3.8E-17 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL504_RS15805 61e00fbf99aeadd71b2e7a01ba997314 181 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS12425 fa13e5569cd0b9d03c8bf3df9e3c6a54 439 SUPERFAMILY SSF103473 3 413 1.31E-27 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS12425 fa13e5569cd0b9d03c8bf3df9e3c6a54 439 Gene3D G3DSA:1.20.1250.20 228 423 1.3E-8 T 28-03-2018 AL504_RS12425 fa13e5569cd0b9d03c8bf3df9e3c6a54 439 Pfam PF07690 Major Facilitator Superfamily 11 349 2.1E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS12425 fa13e5569cd0b9d03c8bf3df9e3c6a54 439 Gene3D G3DSA:1.20.1250.20 1 217 4.1E-16 T 28-03-2018 AL504_RS12275 e8925acd964fd4b3be0b1c17dca8d839 117 Gene3D G3DSA:3.30.1330.40 3 117 9.2E-26 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS12275 e8925acd964fd4b3be0b1c17dca8d839 117 Pfam PF01042 Endoribonuclease L-PSP 6 115 1.1E-24 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS12275 e8925acd964fd4b3be0b1c17dca8d839 117 SUPERFAMILY SSF55298 11 116 7.7E-29 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS12275 e8925acd964fd4b3be0b1c17dca8d839 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 92 110 - T 28-03-2018 IPR019897 RidA, conserved site AL504_RS25180 2256c8f0b7ff30fe062174db8780ce47 277 Pfam PF01497 Periplasmic binding protein 25 249 1.3E-39 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS25180 2256c8f0b7ff30fe062174db8780ce47 277 Gene3D G3DSA:3.40.50.1980 128 277 6.6E-22 T 28-03-2018 AL504_RS25180 2256c8f0b7ff30fe062174db8780ce47 277 SUPERFAMILY SSF53807 20 267 3.89E-49 T 28-03-2018 AL504_RS25180 2256c8f0b7ff30fe062174db8780ce47 277 Gene3D G3DSA:3.40.50.1980 21 127 2.2E-25 T 28-03-2018 AL504_RS24150 f754463a1ba644250bbc22addb06a2b2 129 Gene3D G3DSA:1.10.4040.10 78 126 6.4E-8 T 28-03-2018 AL504_RS24150 f754463a1ba644250bbc22addb06a2b2 129 Pfam PF03965 Penicillinase repressor 12 125 1.4E-22 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AL504_RS24150 f754463a1ba644250bbc22addb06a2b2 129 Gene3D G3DSA:1.10.10.10 12 76 1.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24150 f754463a1ba644250bbc22addb06a2b2 129 SUPERFAMILY SSF46785 9 126 2.07E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 1.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 1.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 1.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 1.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 1.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 38.194 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 6.0E-125 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 SUPERFAMILY SSF52096 27 285 1.78E-85 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 Pfam PF01039 Carboxyl transferase domain 101 242 1.8E-15 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL504_RS12235 613f2e3cc146a3ac5305b56da010c4dd 292 Gene3D G3DSA:3.90.226.10 14 291 2.4E-68 T 28-03-2018 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Gene3D G3DSA:2.40.30.10 96 194 9.6E-20 T 28-03-2018 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Pfam PF00557 Metallopeptidase family M24 363 517 4.6E-22 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 36 44 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Gene3D G3DSA:3.40.50.80 203 341 6.2E-23 T 28-03-2018 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Pfam PF00970 Oxidoreductase FAD-binding domain 101 195 1.4E-8 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 SUPERFAMILY SSF55920 356 522 3.93E-27 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 PRINTS PR00410 Phenol hydroxylase reductase family signature 235 244 1.1E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 PRINTS PR00410 Phenol hydroxylase reductase family signature 210 229 1.1E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 PRINTS PR00410 Phenol hydroxylase reductase family signature 128 140 1.1E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 PRINTS PR00410 Phenol hydroxylase reductase family signature 144 151 1.1E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 1.1E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 SUPERFAMILY SSF54292 3 89 2.62E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Pfam PF00175 Oxidoreductase NAD-binding domain 211 314 3.7E-12 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Gene3D G3DSA:3.90.230.10 356 533 1.8E-26 T 28-03-2018 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 SUPERFAMILY SSF63380 98 195 2.84E-20 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 79 3.3E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 Gene3D G3DSA:3.10.20.30 1 95 1.2E-14 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS29740 2a5fbe345d3d313e428dc993300d229b 567 SUPERFAMILY SSF52343 207 334 1.57E-27 T 28-03-2018 AL504_RS26875 a1d8319118880ebe07d5448fb6116224 182 Gene3D G3DSA:1.20.120.520 5 179 4.8E-29 T 28-03-2018 AL504_RS26875 a1d8319118880ebe07d5448fb6116224 182 Pfam PF01814 Hemerythrin HHE cation binding domain 19 157 8.2E-17 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL504_RS16445 76738a12c896349470bc0e32b2963ec8 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 30 91 9.6E-13 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL504_RS16445 76738a12c896349470bc0e32b2963ec8 162 Pfam PF01467 Cytidylyltransferase-like 32 124 3.0E-13 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL504_RS16445 76738a12c896349470bc0e32b2963ec8 162 SUPERFAMILY SSF52374 28 159 1.06E-21 T 28-03-2018 AL504_RS16445 76738a12c896349470bc0e32b2963ec8 162 Gene3D G3DSA:3.40.50.620 27 148 3.2E-21 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 461 480 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 SUPERFAMILY SSF52518 402 597 1.16E-69 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 25 595 4.0E-214 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 SUPERFAMILY SSF52518 22 188 2.94E-59 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 226 363 2.5E-41 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 25 188 6.5E-57 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 Gene3D G3DSA:3.40.50.1220 219 383 2.6E-49 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 Gene3D G3DSA:3.40.50.970 384 588 9.5E-54 T 28-03-2018 AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 424 572 2.8E-53 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 SUPERFAMILY SSF52467 220 391 1.02E-56 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS19020 16e6af3af29f6ca594c7f6631036d22c 606 Gene3D G3DSA:3.40.50.970 17 216 1.4E-62 T 28-03-2018 AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 Pfam PF01430 Hsp33 protein 3 286 2.7E-84 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 Gene3D G3DSA:3.90.1280.10 239 294 7.1E-22 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 297 29.156 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 Gene3D G3DSA:3.55.30.10 1 179 1.8E-58 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 Gene3D G3DSA:1.10.287.480 194 238 2.3E-16 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 SUPERFAMILY SSF118352 237 295 6.54E-19 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 SUPERFAMILY SSF64397 3 245 3.66E-63 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL504_RS11850 fa69d687235739286f5697e1c5b1370a 309 PIRSF PIRSF005261 1 298 5.9E-74 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL504_RS15370 8a0206968ad2cc3bd6ae72adc916bda2 138 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 101 137 1.7E-8 T 28-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AL504_RS15370 8a0206968ad2cc3bd6ae72adc916bda2 138 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 137 8.9E-16 T 28-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 38.207 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 SUPERFAMILY SSF142695 220 380 1.19E-41 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 19 214 7.5E-73 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 Gene3D G3DSA:3.90.870.10 10 227 9.8E-94 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 Pfam PF00925 GTP cyclohydrolase II 225 379 1.5E-32 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 23 213 1.1E-81 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 SUPERFAMILY SSF55821 16 218 4.81E-85 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS23420 2e06b89c77d2b3e7a8ebc5c9891d4ae9 391 PIRSF PIRSF001259 17 390 5.2E-113 T 28-03-2018 AL504_RS17955 cb96171f6d85976139152426726161e9 267 Pfam PF04333 MlaA lipoprotein 31 227 9.5E-72 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL504_RS17955 cb96171f6d85976139152426726161e9 267 PRINTS PR01805 VacJ lipoprotein signature 49 65 3.8E-26 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL504_RS17955 cb96171f6d85976139152426726161e9 267 PRINTS PR01805 VacJ lipoprotein signature 32 45 3.8E-26 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL504_RS17955 cb96171f6d85976139152426726161e9 267 PRINTS PR01805 VacJ lipoprotein signature 136 153 3.8E-26 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL504_RS17955 cb96171f6d85976139152426726161e9 267 PRINTS PR01805 VacJ lipoprotein signature 100 117 3.8E-26 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL504_RS09270 4120697069257166df731d66cd4096f1 187 Gene3D G3DSA:3.40.630.30 25 186 1.8E-25 T 28-03-2018 AL504_RS09270 4120697069257166df731d66cd4096f1 187 SUPERFAMILY SSF55729 26 146 5.32E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS09270 4120697069257166df731d66cd4096f1 187 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 183 3.7E-67 T 28-03-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178 AL504_RS09270 4120697069257166df731d66cd4096f1 187 Pfam PF00583 Acetyltransferase (GNAT) family 59 144 7.0E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 SUPERFAMILY SSF53448 136 433 1.93E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 Gene3D G3DSA:3.90.550.10 155 393 4.3E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 81 101 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 406 432 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 551 572 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 435 454 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 164 183 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 475 494 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 245 269 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 515 539 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 PRINTS PR01439 Cellulose synthase subunit A signature 109 134 4.4E-65 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 34 714 5.5E-268 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 Pfam PF00535 Glycosyl transferase family 2 158 328 2.1E-33 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 Pfam PF07238 PilZ domain 578 674 1.7E-11 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 Gene3D G3DSA:2.40.10.220 572 684 6.5E-14 T 28-03-2018 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 SUPERFAMILY SSF141371 579 669 3.69E-8 T 28-03-2018 AL504_RS19850 a8db27aa494465af397fd2eb99d40c12 732 Pfam PF03552 Cellulose synthase 333 451 2.0E-9 T 28-03-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AL504_RS09190 569a1a3f9cb87d91aeca0dc38c3e8088 272 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 272 103.393 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL504_RS09190 569a1a3f9cb87d91aeca0dc38c3e8088 272 Gene3D G3DSA:1.10.1270.20 182 255 3.3E-25 T 28-03-2018 AL504_RS09190 569a1a3f9cb87d91aeca0dc38c3e8088 272 SUPERFAMILY SSF75217 1 236 4.25E-88 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL504_RS09190 569a1a3f9cb87d91aeca0dc38c3e8088 272 PIRSF PIRSF000386 1 252 3.0E-85 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL504_RS09190 569a1a3f9cb87d91aeca0dc38c3e8088 272 Gene3D G3DSA:3.40.1280.10 1 181 3.0E-66 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL504_RS09190 569a1a3f9cb87d91aeca0dc38c3e8088 272 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 228 9.8E-56 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL504_RS09190 569a1a3f9cb87d91aeca0dc38c3e8088 272 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 4.2E-83 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL504_RS14125 a709d330cb25a0583ae1a987da6a7cc4 254 Pfam PF10370 Domain of unknown function (DUF2437) 1 50 6.4E-13 T 28-03-2018 IPR018833 Domain of unknown function DUF2437 AL504_RS14125 a709d330cb25a0583ae1a987da6a7cc4 254 Gene3D G3DSA:3.90.850.10 26 253 4.9E-62 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS14125 a709d330cb25a0583ae1a987da6a7cc4 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 56 249 1.3E-51 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS14125 a709d330cb25a0583ae1a987da6a7cc4 254 SUPERFAMILY SSF56529 53 250 3.79E-59 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 6.4E-188 T 28-03-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 Gene3D G3DSA:3.20.20.70 1 331 1.9E-108 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 327 1.2E-95 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 SUPERFAMILY SSF51569 1 328 1.76E-106 T 28-03-2018 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 PIRSF PIRSF001359 1 329 1.2E-85 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL504_RS26010 d59f3dac4bf6dce0d6bb3284ca637879 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.9E-101 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 Gene3D G3DSA:3.40.50.970 382 558 3.0E-42 T 28-03-2018 AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 547 7.7E-40 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 SUPERFAMILY SSF52518 376 552 9.7E-56 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 173 8.4E-54 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 Gene3D G3DSA:3.40.50.970 1 187 2.2E-52 T 28-03-2018 AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 Gene3D G3DSA:3.40.50.1220 190 381 2.6E-42 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 SUPERFAMILY SSF52518 3 180 4.71E-50 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 333 1.4E-31 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 437 456 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 SUPERFAMILY SSF52467 372 392 4.62E-41 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS14690 a0d65665aa88cef116acbd3af487e5f3 564 SUPERFAMILY SSF52467 190 340 4.62E-41 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS02320 1d7bffca8af67dad2e1b386b73a4d15a 299 Pfam PF00892 EamA-like transporter family 13 140 5.1E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS02320 1d7bffca8af67dad2e1b386b73a4d15a 299 Pfam PF00892 EamA-like transporter family 153 283 1.5E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS02320 1d7bffca8af67dad2e1b386b73a4d15a 299 SUPERFAMILY SSF103481 188 286 1.11E-14 T 28-03-2018 AL504_RS02320 1d7bffca8af67dad2e1b386b73a4d15a 299 SUPERFAMILY SSF103481 40 140 1.83E-13 T 28-03-2018 AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 Gene3D G3DSA:2.40.50.140 274 331 6.9E-15 T 28-03-2018 AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 Pfam PF00005 ABC transporter 20 161 3.8E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 Gene3D G3DSA:3.40.50.300 1 236 2.2E-77 T 28-03-2018 AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 SUPERFAMILY SSF52540 4 243 1.21E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 Pfam PF08402 TOBE domain 271 339 1.0E-14 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 SMART SM00382 28 211 2.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS18565 bc51a20cff827addd6a8817e9b7231a5 351 SUPERFAMILY SSF50331 236 345 4.37E-22 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS26370 9833db17e34c99025bbb1d576dca436e 175 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 121 2.0E-14 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS26370 9833db17e34c99025bbb1d576dca436e 175 Gene3D G3DSA:1.20.1290.10 41 175 5.7E-43 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS26370 9833db17e34c99025bbb1d576dca436e 175 SUPERFAMILY SSF69118 1 171 3.74E-44 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS26370 9833db17e34c99025bbb1d576dca436e 175 Gene3D G3DSA:1.20.5.810 11 40 2.5E-4 T 28-03-2018 AL504_RS26415 1e257def1308845cce44d95caa324c00 569 SUPERFAMILY SSF161098 15 277 3.27E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26415 1e257def1308845cce44d95caa324c00 569 Gene3D G3DSA:1.10.3720.10 13 278 9.9E-36 T 28-03-2018 AL504_RS26415 1e257def1308845cce44d95caa324c00 569 Gene3D G3DSA:1.10.3720.10 297 562 1.5E-32 T 28-03-2018 AL504_RS26415 1e257def1308845cce44d95caa324c00 569 SUPERFAMILY SSF161098 297 555 4.11E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26415 1e257def1308845cce44d95caa324c00 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 368 555 2.5E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26415 1e257def1308845cce44d95caa324c00 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 270 3.6E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 293 7.5E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 530 4.9E-5 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 SUPERFAMILY SSF52540 4 254 1.3E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 Pfam PF00005 ABC transporter 303 453 1.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 Pfam PF00005 ABC transporter 25 182 1.3E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 SMART SM00382 33 232 4.7E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 SMART SM00382 312 511 7.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 SUPERFAMILY SSF52540 292 525 6.02E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 Gene3D G3DSA:3.40.50.300 276 544 5.7E-75 T 28-03-2018 AL504_RS24210 cf8a6e6d69cbc56a4f8b26cb6ccd97a9 545 Gene3D G3DSA:3.40.50.300 1 275 2.9E-72 T 28-03-2018 AL504_RS14660 225eee65103151df58e5a7531f514388 490 SMART SM00924 75 178 1.8E-38 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL504_RS14660 225eee65103151df58e5a7531f514388 490 Pfam PF01769 Divalent cation transporter 361 482 8.4E-23 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL504_RS14660 225eee65103151df58e5a7531f514388 490 Pfam PF03448 MgtE intracellular N domain 75 176 1.3E-26 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL504_RS14660 225eee65103151df58e5a7531f514388 490 Gene3D G3DSA:1.10.357.20 317 490 3.5E-34 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL504_RS14660 225eee65103151df58e5a7531f514388 490 SUPERFAMILY SSF54631 177 312 2.4E-27 T 28-03-2018 AL504_RS14660 225eee65103151df58e5a7531f514388 490 Gene3D G3DSA:3.10.580.10 170 225 0.0067 T 28-03-2018 AL504_RS14660 225eee65103151df58e5a7531f514388 490 TIGRFAM TIGR00400 mgtE: magnesium transporter 59 489 1.6E-82 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AL504_RS14660 225eee65103151df58e5a7531f514388 490 Pfam PF00571 CBS domain 178 234 6.1E-5 T 28-03-2018 IPR000644 CBS domain AL504_RS14660 225eee65103151df58e5a7531f514388 490 Pfam PF00571 CBS domain 242 296 2.4E-6 T 28-03-2018 IPR000644 CBS domain AL504_RS14660 225eee65103151df58e5a7531f514388 490 Gene3D G3DSA:3.10.580.10 226 306 9.9E-14 T 28-03-2018 AL504_RS14660 225eee65103151df58e5a7531f514388 490 SUPERFAMILY SSF161093 318 489 6.41E-44 T 28-03-2018 AL504_RS14660 225eee65103151df58e5a7531f514388 490 SUPERFAMILY SSF158791 56 175 2.35E-28 T 28-03-2018 AL504_RS14660 225eee65103151df58e5a7531f514388 490 SMART SM00116 185 238 1.2 T 28-03-2018 IPR000644 CBS domain AL504_RS14660 225eee65103151df58e5a7531f514388 490 SMART SM00116 249 297 0.0023 T 28-03-2018 IPR000644 CBS domain AL504_RS14660 225eee65103151df58e5a7531f514388 490 Gene3D G3DSA:1.25.60.10 42 169 1.7E-22 T 28-03-2018 AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 SUPERFAMILY SSF46785 13 150 1.34E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 9.5E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 9.5E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 9.5E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 Gene3D G3DSA:1.10.10.10 2 155 7.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 Pfam PF01047 MarR family 47 104 7.3E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 SMART SM00347 39 140 6.0E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS16085 1f93d10b3173255009751c99801b46e5 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 113 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 SUPERFAMILY SSF55816 430 604 5.36E-35 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 Pfam PF00149 Calcineurin-like phosphoesterase 37 270 8.3E-8 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 Gene3D G3DSA:3.60.21.10 28 393 4.4E-73 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 ProSitePatterns PS00786 5'-nucleotidase signature 2. 126 137 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 Gene3D G3DSA:3.90.780.10 394 608 3.8E-40 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 Pfam PF02872 5'-nucleotidase, C-terminal domain 434 579 1.8E-28 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 SUPERFAMILY SSF56300 35 341 1.4E-68 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 ProSitePatterns PS00785 5'-nucleotidase signature 1. 37 49 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 PRINTS PR01607 Apyrase family signature 553 572 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 PRINTS PR01607 Apyrase family signature 253 276 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 PRINTS PR01607 Apyrase family signature 471 494 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 PRINTS PR01607 Apyrase family signature 35 53 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 PRINTS PR01607 Apyrase family signature 301 321 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS17525 148a863ff5b9e6e616c6015bdc3bea1b 630 PRINTS PR01607 Apyrase family signature 234 251 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL504_RS04510 4979d898326605c37530e195924af8f7 301 SUPERFAMILY SSF55073 144 298 7.69E-44 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS04510 4979d898326605c37530e195924af8f7 301 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 135 1.9E-11 T 28-03-2018 IPR000014 PAS domain AL504_RS04510 4979d898326605c37530e195924af8f7 301 SMART SM00267 128 299 3.9E-47 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04510 4979d898326605c37530e195924af8f7 301 SUPERFAMILY SSF55785 11 126 2.47E-14 T 28-03-2018 IPR000014 PAS domain AL504_RS04510 4979d898326605c37530e195924af8f7 301 Gene3D G3DSA:3.30.450.20 5 132 1.0E-17 T 28-03-2018 AL504_RS04510 4979d898326605c37530e195924af8f7 301 Gene3D G3DSA:3.30.70.270 133 300 2.3E-55 T 28-03-2018 AL504_RS04510 4979d898326605c37530e195924af8f7 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 297 1.2E-40 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04510 4979d898326605c37530e195924af8f7 301 Pfam PF00989 PAS fold 20 80 1.4E-8 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL504_RS04510 4979d898326605c37530e195924af8f7 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 294 1.7E-37 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04510 4979d898326605c37530e195924af8f7 301 SMART SM00091 19 88 2.4E-5 T 28-03-2018 IPR000014 PAS domain AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 Gene3D G3DSA:3.10.20.30 213 317 1.1E-22 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 SUPERFAMILY SSF63380 2 93 3.65E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 133 142 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 48 62 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 26 36 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 108 127 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 72 86 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 36 48 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 86 100 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 187 195 5.2E-46 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 Gene3D G3DSA:3.40.50.80 98 212 1.7E-20 T 28-03-2018 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 Gene3D G3DSA:2.40.30.10 1 96 2.6E-15 T 28-03-2018 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 SUPERFAMILY SSF54292 207 316 4.85E-23 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 239 308 2.2E-9 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS00375 bbae57cc982e536be2dffdff98df1a1d 317 SUPERFAMILY SSF52343 98 215 3.54E-27 T 28-03-2018 AL504_RS29010 4172ea8e7cab6691092994ade67e1e96 432 Pfam PF01546 Peptidase family M20/M25/M40 102 422 1.6E-32 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS29010 4172ea8e7cab6691092994ade67e1e96 432 SUPERFAMILY SSF53187 342 426 5.71E-57 T 28-03-2018 AL504_RS29010 4172ea8e7cab6691092994ade67e1e96 432 SUPERFAMILY SSF53187 10 208 5.71E-57 T 28-03-2018 AL504_RS29010 4172ea8e7cab6691092994ade67e1e96 432 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 25 414 8.3E-93 T 28-03-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase AL504_RS29010 4172ea8e7cab6691092994ade67e1e96 432 Pfam PF07687 Peptidase dimerisation domain 206 322 4.4E-18 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS29010 4172ea8e7cab6691092994ade67e1e96 432 Gene3D G3DSA:3.40.630.10 2 320 9.0E-58 T 28-03-2018 AL504_RS29010 4172ea8e7cab6691092994ade67e1e96 432 SUPERFAMILY SSF55031 209 321 1.36E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS05110 7c7831c10d3b95fb0d8568c3b5bc3bf6 296 SUPERFAMILY SSF53335 9 282 9.97E-93 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS05110 7c7831c10d3b95fb0d8568c3b5bc3bf6 296 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 281 1.2E-72 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL504_RS05110 7c7831c10d3b95fb0d8568c3b5bc3bf6 296 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 272 39.947 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL504_RS05110 7c7831c10d3b95fb0d8568c3b5bc3bf6 296 Gene3D G3DSA:3.40.50.150 1 291 7.3E-86 T 28-03-2018 AL504_RS16380 41df75426788cfa2915c8d9a4a5b8664 219 Gene3D G3DSA:1.10.3720.10 2 219 2.6E-40 T 28-03-2018 AL504_RS16380 41df75426788cfa2915c8d9a4a5b8664 219 SUPERFAMILY SSF161098 13 213 1.83E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16380 41df75426788cfa2915c8d9a4a5b8664 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 2.1E-25 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS16380 41df75426788cfa2915c8d9a4a5b8664 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 202 4.7E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 9 292 36.722 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 72 86 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 Gene3D G3DSA:3.10.310.10 132 279 1.5E-46 T 28-03-2018 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 Pfam PF01678 Diaminopimelate epimerase 172 283 1.6E-24 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 Pfam PF01678 Diaminopimelate epimerase 11 130 2.5E-32 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 Gene3D G3DSA:3.10.310.10 3 131 6.0E-48 T 28-03-2018 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 SUPERFAMILY SSF54506 9 292 7.38E-48 T 28-03-2018 AL504_RS20600 a404806dc6fb263b3256be2cea9be4e0 303 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 10 290 4.2E-83 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL504_RS30300 6d2b13827141beda87cf6dfde48f5ba0 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 317 6.8E-26 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS30300 6d2b13827141beda87cf6dfde48f5ba0 318 Gene3D G3DSA:3.40.50.720 5 117 2.5E-28 T 28-03-2018 AL504_RS30300 6d2b13827141beda87cf6dfde48f5ba0 318 SUPERFAMILY SSF51735 104 287 3.79E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS30300 6d2b13827141beda87cf6dfde48f5ba0 318 SUPERFAMILY SSF52283 6 136 1.44E-31 T 28-03-2018 AL504_RS30300 6d2b13827141beda87cf6dfde48f5ba0 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 286 1.3E-47 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS30300 6d2b13827141beda87cf6dfde48f5ba0 318 Gene3D G3DSA:3.40.50.720 118 289 2.5E-49 T 28-03-2018 AL504_RS30300 6d2b13827141beda87cf6dfde48f5ba0 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 152 179 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 Pfam PF00501 AMP-binding enzyme 38 440 4.3E-91 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 Gene3D G3DSA:3.40.50.980 196 348 1.4E-33 T 28-03-2018 AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 Gene3D G3DSA:2.30.38.10 349 434 1.2E-21 T 28-03-2018 AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 Gene3D G3DSA:3.30.300.30 436 538 1.2E-30 T 28-03-2018 AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 Gene3D G3DSA:3.40.50.980 24 195 1.7E-44 T 28-03-2018 AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 528 1.8E-21 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS07730 747e20c98b719b24e4937d70b898b0c3 540 SUPERFAMILY SSF56801 13 536 1.03E-145 T 28-03-2018 AL504_RS28925 6293d45540c2f3166b29fae1cc070da3 245 Gene3D G3DSA:3.40.50.300 1 223 7.7E-53 T 28-03-2018 AL504_RS28925 6293d45540c2f3166b29fae1cc070da3 245 SMART SM00382 26 202 2.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28925 6293d45540c2f3166b29fae1cc070da3 245 Pfam PF00005 ABC transporter 17 151 3.8E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28925 6293d45540c2f3166b29fae1cc070da3 245 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS28925 6293d45540c2f3166b29fae1cc070da3 245 SUPERFAMILY SSF52540 2 210 1.43E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03795 0a0ce0e0f3325477159750bcce3e77c8 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 75 1.6E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS03795 0a0ce0e0f3325477159750bcce3e77c8 207 SUPERFAMILY SSF52833 2 85 2.7E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS03795 0a0ce0e0f3325477159750bcce3e77c8 207 Gene3D G3DSA:1.20.1050.10 92 207 1.2E-21 T 28-03-2018 AL504_RS03795 0a0ce0e0f3325477159750bcce3e77c8 207 Pfam PF14497 Glutathione S-transferase, C-terminal domain 123 203 4.0E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS03795 0a0ce0e0f3325477159750bcce3e77c8 207 SUPERFAMILY SSF47616 83 204 2.27E-21 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS03795 0a0ce0e0f3325477159750bcce3e77c8 207 Gene3D G3DSA:3.40.30.10 1 91 3.2E-19 T 28-03-2018 AL504_RS22040 4e9d26d4ea7375655199dab3d0de8c99 298 Pfam PF00892 EamA-like transporter family 159 289 1.2E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS22040 4e9d26d4ea7375655199dab3d0de8c99 298 Pfam PF00892 EamA-like transporter family 13 143 4.3E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS22040 4e9d26d4ea7375655199dab3d0de8c99 298 SUPERFAMILY SSF103481 191 293 1.96E-8 T 28-03-2018 AL504_RS22040 4e9d26d4ea7375655199dab3d0de8c99 298 SUPERFAMILY SSF103481 51 143 1.96E-12 T 28-03-2018 AL504_RS14355 442f38854a33662336732d8221694c97 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 144 3.1E-31 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL504_RS14355 442f38854a33662336732d8221694c97 179 Gene3D G3DSA:3.40.50.1000 1 179 2.5E-32 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14355 442f38854a33662336732d8221694c97 179 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 145 1.0E-43 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL504_RS14355 442f38854a33662336732d8221694c97 179 SUPERFAMILY SSF56784 2 176 1.47E-44 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14355 442f38854a33662336732d8221694c97 179 Pfam PF13242 HAD-hyrolase-like 99 169 1.0E-10 T 28-03-2018 AL504_RS14355 442f38854a33662336732d8221694c97 179 PIRSF PIRSF004682 1 179 3.7E-55 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL504_RS19790 4636ff2b6364ce757bc89427c1023cec 338 Gene3D G3DSA:3.90.550.10 65 295 5.2E-4 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.9E-121 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 Gene3D G3DSA:1.10.8.60 167 242 1.6E-15 T 28-03-2018 AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 Gene3D G3DSA:1.20.272.10 243 362 9.8E-7 T 28-03-2018 AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 SUPERFAMILY SSF52540 34 224 4.48E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 SMART SM00382 37 179 5.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.4E-37 T 28-03-2018 AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 Gene3D G3DSA:3.40.50.300 2 166 9.6E-39 T 28-03-2018 AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 SUPERFAMILY SSF48019 243 360 2.89E-23 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 366 4.7E-19 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AL504_RS26315 4c56ce6d322435cf3c9fb20c0308ba8e 758 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 631 747 1.0E-6 T 28-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 SMART SM00382 368 554 2.2E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 SUPERFAMILY SSF52540 334 578 1.59E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 Gene3D G3DSA:1.20.1560.10 18 331 1.0E-16 T 28-03-2018 AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 Pfam PF00005 ABC transporter 362 507 1.7E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 SUPERFAMILY SSF90123 27 331 5.23E-29 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 Gene3D G3DSA:3.40.50.300 332 583 1.4E-70 T 28-03-2018 AL504_RS04390 91f6830ad0b158c1c326e32a6c8f6453 584 Pfam PF00664 ABC transporter transmembrane region 62 279 2.6E-7 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS19285 0b02e0d9cf163f6974a06df527e5ba9d 250 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 131 1.1E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS19285 0b02e0d9cf163f6974a06df527e5ba9d 250 SUPERFAMILY SSF161098 24 222 8.9E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19285 0b02e0d9cf163f6974a06df527e5ba9d 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 236 1.6E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19285 0b02e0d9cf163f6974a06df527e5ba9d 250 Gene3D G3DSA:1.10.3720.10 2 238 2.9E-42 T 28-03-2018 AL504_RS04580 56dbd490b98f48ee3dc9fbf9f9604628 255 SMART SM00382 30 231 4.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04580 56dbd490b98f48ee3dc9fbf9f9604628 255 Pfam PF00005 ABC transporter 22 181 2.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04580 56dbd490b98f48ee3dc9fbf9f9604628 255 Gene3D G3DSA:3.40.50.300 2 254 1.3E-58 T 28-03-2018 AL504_RS04580 56dbd490b98f48ee3dc9fbf9f9604628 255 SUPERFAMILY SSF52540 5 253 3.55E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04580 56dbd490b98f48ee3dc9fbf9f9604628 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 253 4.7E-10 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 473 19.591 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PRINTS PR01806 Virulence factor MviN signature 415 432 2.5E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PRINTS PR01806 Virulence factor MviN signature 363 382 2.5E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PRINTS PR01806 Virulence factor MviN signature 33 52 2.5E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PRINTS PR01806 Virulence factor MviN signature 265 291 2.5E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PRINTS PR01806 Virulence factor MviN signature 135 159 2.5E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PRINTS PR01806 Virulence factor MviN signature 52 68 2.5E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PRINTS PR01806 Virulence factor MviN signature 159 180 2.5E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 1.0E-140 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 Pfam PF03023 MviN-like protein 28 471 4.5E-132 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS30360 6a2eef9c9877780d62921316bdecd969 519 PIRSF PIRSF002869 1 519 1.9E-149 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL504_RS15475 d02e2dc8ca65298dd7944458d43a0102 330 SUPERFAMILY SSF53850 123 296 1.14E-10 T 28-03-2018 AL504_RS15475 d02e2dc8ca65298dd7944458d43a0102 330 Gene3D G3DSA:3.40.50.720 229 326 0.0054 T 28-03-2018 AL504_RS15475 d02e2dc8ca65298dd7944458d43a0102 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 325 3.5E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS15475 d02e2dc8ca65298dd7944458d43a0102 330 Gene3D G3DSA:3.40.190.10 129 228 6.8E-8 T 28-03-2018 AL504_RS15475 d02e2dc8ca65298dd7944458d43a0102 330 PIRSF PIRSF017082 1 329 9.5E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS24715 6819bac025ca7431ba066680250da953 267 SMART SM00342 175 257 9.7E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24715 6819bac025ca7431ba066680250da953 267 Pfam PF12833 Helix-turn-helix domain 183 257 1.6E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24715 6819bac025ca7431ba066680250da953 267 SUPERFAMILY SSF46689 214 256 6.81E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24715 6819bac025ca7431ba066680250da953 267 Gene3D G3DSA:1.10.10.60 216 261 1.9E-8 T 28-03-2018 AL504_RS24715 6819bac025ca7431ba066680250da953 267 SUPERFAMILY SSF51182 4 183 9.19E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS24715 6819bac025ca7431ba066680250da953 267 Gene3D G3DSA:1.10.10.60 155 215 2.7E-9 T 28-03-2018 AL504_RS24715 6819bac025ca7431ba066680250da953 267 Gene3D G3DSA:2.60.120.10 10 106 1.5E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23990 226607feb3628d49f01244ab4567d10d 498 Gene3D G3DSA:3.40.710.10 43 333 1.6E-54 T 28-03-2018 AL504_RS23990 226607feb3628d49f01244ab4567d10d 498 SUPERFAMILY SSF56601 17 311 3.75E-71 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS23990 226607feb3628d49f01244ab4567d10d 498 Pfam PF00144 Beta-lactamase 53 303 7.0E-33 T 28-03-2018 IPR001466 Beta-lactamase-related AL504_RS13550 a1b3778dc62fdc8d0e6e30d96b087d8f 150 SUPERFAMILY SSF54427 30 140 8.51E-27 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS13550 a1b3778dc62fdc8d0e6e30d96b087d8f 150 Pfam PF12680 SnoaL-like domain 35 132 1.8E-16 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS13550 a1b3778dc62fdc8d0e6e30d96b087d8f 150 Gene3D G3DSA:3.10.450.50 23 150 4.3E-29 T 28-03-2018 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 264 8.0E-19 T 28-03-2018 IPR000014 PAS domain AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 141 3.3E-20 T 28-03-2018 IPR000014 PAS domain AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 Pfam PF08447 PAS fold 44 129 7.4E-17 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 Pfam PF08447 PAS fold 166 251 8.1E-16 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 284 437 4.3E-44 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SUPERFAMILY SSF58104 264 467 6.8E-48 T 28-03-2018 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 Gene3D G3DSA:3.40.50.10600 13 135 5.8E-34 T 28-03-2018 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 Gene3D G3DSA:3.40.50.10600 136 259 2.0E-33 T 28-03-2018 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SUPERFAMILY SSF55785 155 255 1.73E-25 T 28-03-2018 IPR000014 PAS domain AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SUPERFAMILY SSF55785 32 138 1.24E-27 T 28-03-2018 IPR000014 PAS domain AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SMART SM00086 94 136 4.3E-5 T 28-03-2018 IPR001610 PAC motif AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SMART SM00086 216 258 6.5E-5 T 28-03-2018 IPR001610 PAC motif AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 Gene3D G3DSA:1.10.287.950 260 472 8.4E-40 T 28-03-2018 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SMART SM00091 21 89 0.0035 T 28-03-2018 IPR000014 PAS domain AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SMART SM00091 141 211 7.6 T 28-03-2018 IPR000014 PAS domain AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 SMART SM00283 247 465 1.3E-44 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 7.5E-34 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 381 7.5E-34 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26675 4430b1d3f46b558bfef7e99c4cc8fbae 489 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 350 7.5E-34 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS07845 6cf93ea6512b2a4bdbb0584606b8a21c 233 Gene3D G3DSA:3.40.50.1860 7 127 6.1E-19 T 28-03-2018 AL504_RS07845 6cf93ea6512b2a4bdbb0584606b8a21c 233 SUPERFAMILY SSF53681 8 120 3.33E-16 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS07845 6cf93ea6512b2a4bdbb0584606b8a21c 233 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 227 8.5E-40 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS07845 6cf93ea6512b2a4bdbb0584606b8a21c 233 Gene3D G3DSA:3.40.50.1860 128 233 9.0E-22 T 28-03-2018 AL504_RS07845 6cf93ea6512b2a4bdbb0584606b8a21c 233 SUPERFAMILY SSF53681 122 231 7.85E-28 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS07845 6cf93ea6512b2a4bdbb0584606b8a21c 233 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 196 206 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS07845 6cf93ea6512b2a4bdbb0584606b8a21c 233 TIGRFAM TIGR00035 asp_race: aspartate racemase 17 233 5.1E-32 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AL504_RS14425 0551c089e6b5c191806d76e3e41cbad6 228 Pfam PF00483 Nucleotidyl transferase 3 128 2.8E-21 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL504_RS14425 0551c089e6b5c191806d76e3e41cbad6 228 Gene3D G3DSA:3.90.550.10 1 228 5.0E-44 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS14425 0551c089e6b5c191806d76e3e41cbad6 228 SUPERFAMILY SSF53448 1 223 2.14E-55 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS02260 e4736b1344cf13b5f679ea3eb3e93f16 245 SUPERFAMILY SSF46785 9 75 5.47E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02260 e4736b1344cf13b5f679ea3eb3e93f16 245 Pfam PF01614 Bacterial transcriptional regulator 126 239 1.8E-17 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS02260 e4736b1344cf13b5f679ea3eb3e93f16 245 Gene3D G3DSA:3.30.450.40 75 245 1.5E-38 T 28-03-2018 IPR029016 GAF domain-like AL504_RS02260 e4736b1344cf13b5f679ea3eb3e93f16 245 SMART SM00346 6 94 5.0E-7 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS02260 e4736b1344cf13b5f679ea3eb3e93f16 245 Gene3D G3DSA:1.10.10.10 7 70 3.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02260 e4736b1344cf13b5f679ea3eb3e93f16 245 Pfam PF09339 IclR helix-turn-helix domain 9 57 2.2E-10 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS02260 e4736b1344cf13b5f679ea3eb3e93f16 245 SUPERFAMILY SSF55781 71 242 1.63E-36 T 28-03-2018 IPR029016 GAF domain-like AL504_RS06580 f2d86955d5201623d9ef433789a39c35 362 Gene3D G3DSA:3.90.25.10 199 352 5.2E-28 T 28-03-2018 AL504_RS06580 f2d86955d5201623d9ef433789a39c35 362 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 10 348 9.8E-138 T 28-03-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 AL504_RS06580 f2d86955d5201623d9ef433789a39c35 362 Pfam PF16363 GDP-mannose 4,6 dehydratase 16 325 3.0E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06580 f2d86955d5201623d9ef433789a39c35 362 SUPERFAMILY SSF51735 11 335 3.1E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06580 f2d86955d5201623d9ef433789a39c35 362 Gene3D G3DSA:3.40.50.720 3 198 2.9E-31 T 28-03-2018 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 713 739 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Pfam PF04539 Sigma-70 region 3 599 674 3.1E-24 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 544 557 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 SUPERFAMILY SSF88659 593 666 2.04E-18 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 PRINTS PR00046 Major sigma-70 factor signature 713 728 7.7E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 PRINTS PR00046 Major sigma-70 factor signature 692 704 7.7E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 PRINTS PR00046 Major sigma-70 factor signature 568 576 7.7E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 PRINTS PR00046 Major sigma-70 factor signature 544 557 7.7E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 PRINTS PR00046 Major sigma-70 factor signature 728 739 7.7E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 516 741 3.3E-39 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Pfam PF04545 Sigma-70, region 4 688 741 7.7E-19 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Gene3D G3DSA:1.10.10.10 590 640 6.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Pfam PF04546 Sigma-70, non-essential region 289 489 6.3E-62 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 SUPERFAMILY SSF88946 265 587 1.88E-96 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 152 753 41.92 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Pfam PF03979 Sigma-70 factor, region 1.1 152 231 1.2E-28 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Pfam PF00140 Sigma-70 factor, region 1.2 248 280 4.7E-14 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 SUPERFAMILY SSF88659 650 751 6.17E-27 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Pfam PF04542 Sigma-70 region 2 522 589 8.5E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 516 752 1.8E-118 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Gene3D G3DSA:1.10.601.10 1 264 8.0E-16 T 28-03-2018 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Gene3D G3DSA:1.10.601.10 265 589 3.6E-100 T 28-03-2018 AL504_RS09065 d4571d77dbc114f8b60e608156922190 755 Gene3D G3DSA:1.10.10.10 682 753 2.6E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16220 52ee1294b3dda2cda056562e1300f070 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 4.4E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS16220 52ee1294b3dda2cda056562e1300f070 212 SUPERFAMILY SSF47616 80 209 2.56E-35 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS16220 52ee1294b3dda2cda056562e1300f070 212 SUPERFAMILY SSF52833 1 84 2.51E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS16220 52ee1294b3dda2cda056562e1300f070 212 Gene3D G3DSA:3.40.30.10 1 96 1.5E-28 T 28-03-2018 AL504_RS16220 52ee1294b3dda2cda056562e1300f070 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 210 1.0E-85 T 28-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AL504_RS16220 52ee1294b3dda2cda056562e1300f070 212 Pfam PF14497 Glutathione S-transferase, C-terminal domain 118 199 1.7E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS16220 52ee1294b3dda2cda056562e1300f070 212 Gene3D G3DSA:1.20.1050.10 97 212 3.6E-31 T 28-03-2018 AL504_RS05075 813a006949dc95aeec5f80eff0b2ad41 548 SUPERFAMILY SSF161098 289 541 2.8E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05075 813a006949dc95aeec5f80eff0b2ad41 548 Gene3D G3DSA:1.10.3720.10 290 544 6.3E-26 T 28-03-2018 AL504_RS05075 813a006949dc95aeec5f80eff0b2ad41 548 Gene3D G3DSA:1.10.3720.10 9 274 1.4E-36 T 28-03-2018 AL504_RS05075 813a006949dc95aeec5f80eff0b2ad41 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 360 540 2.7E-6 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05075 813a006949dc95aeec5f80eff0b2ad41 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 271 3.2E-9 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05075 813a006949dc95aeec5f80eff0b2ad41 548 SUPERFAMILY SSF161098 6 267 1.21E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 SUPERFAMILY SSF51556 60 359 7.86E-87 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 Gene3D G3DSA:2.30.40.10 1 73 5.1E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 Pfam PF01979 Amidohydrolase family 57 393 1.5E-23 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 Gene3D G3DSA:3.20.20.140 74 359 6.9E-63 T 28-03-2018 AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.634 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 SUPERFAMILY SSF51338 361 397 5.4E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 SUPERFAMILY SSF51338 1 60 5.4E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS17485 e429bc748f9747e2c320ff8e5adf8d29 405 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 397 5.4E-147 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 SUPERFAMILY SSF52540 5 234 4.24E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 Gene3D G3DSA:1.10.10.60 270 308 7.8E-9 T 28-03-2018 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 27 40 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 Gene3D G3DSA:1.10.8.60 176 269 6.0E-18 T 28-03-2018 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 Pfam PF00158 Sigma-54 interaction domain 7 169 3.5E-60 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 SUPERFAMILY SSF46689 215 305 5.73E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 215 224 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 89 104 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 Pfam PF02954 Bacterial regulatory protein, Fis family 269 303 3.8E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 SMART SM00382 23 166 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04350 d27909ee95e0798f16e4039b7bc51a89 315 Gene3D G3DSA:3.40.50.300 2 175 1.6E-23 T 28-03-2018 AL504_RS19105 c34208174ffe287553e0560806d83edf 426 SUPERFAMILY SSF51556 52 371 1.12E-109 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS19105 c34208174ffe287553e0560806d83edf 426 Gene3D G3DSA:2.30.40.10 1 65 2.3E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS19105 c34208174ffe287553e0560806d83edf 426 Pfam PF07969 Amidohydrolase family 40 400 1.8E-52 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS19105 c34208174ffe287553e0560806d83edf 426 Gene3D G3DSA:3.20.20.140 66 360 1.1E-48 T 28-03-2018 AL504_RS19105 c34208174ffe287553e0560806d83edf 426 SUPERFAMILY SSF51338 362 407 2.59E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS19105 c34208174ffe287553e0560806d83edf 426 SUPERFAMILY SSF51338 1 52 2.59E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS28715 22badcae7d9ab66e8201fbb33f516d8c 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 36 491 8.7E-87 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS28715 22badcae7d9ab66e8201fbb33f516d8c 505 Pfam PF02321 Outer membrane efflux protein 90 281 3.1E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS28715 22badcae7d9ab66e8201fbb33f516d8c 505 Pfam PF02321 Outer membrane efflux protein 315 490 1.0E-15 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS28715 22badcae7d9ab66e8201fbb33f516d8c 505 Gene3D G3DSA:1.20.1600.10 20 498 1.6E-66 T 28-03-2018 AL504_RS28715 22badcae7d9ab66e8201fbb33f516d8c 505 SUPERFAMILY SSF56954 81 494 9.42E-81 T 28-03-2018 AL504_RS28715 22badcae7d9ab66e8201fbb33f516d8c 505 SUPERFAMILY SSF56954 25 58 9.42E-81 T 28-03-2018 AL504_RS25210 6a776ba532af98cd2e8db4b6789a46b1 201 Pfam PF01569 PAP2 superfamily 59 168 5.3E-14 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS25210 6a776ba532af98cd2e8db4b6789a46b1 201 Gene3D G3DSA:1.20.144.10 19 186 4.6E-20 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS25210 6a776ba532af98cd2e8db4b6789a46b1 201 SUPERFAMILY SSF48317 7 174 3.27E-30 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS25210 6a776ba532af98cd2e8db4b6789a46b1 201 SMART SM00014 58 168 1.9E-9 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS04865 0d4e8bb1ee3f7d9467ecb554c6f5cf8a 527 PIRSF PIRSF006060 5 501 6.1E-83 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS04865 0d4e8bb1ee3f7d9467ecb554c6f5cf8a 527 ProSitePatterns PS00218 Amino acid permeases signature. 56 87 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AL504_RS04865 0d4e8bb1ee3f7d9467ecb554c6f5cf8a 527 Pfam PF00324 Amino acid permease 31 481 1.8E-135 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AL504_RS30635 45ac0ca966d723d6b4e3c0aafc0dda66 346 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 178 7.5E-29 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AL504_RS22300 40df0dcd44f79c189bfc0737423340cb 420 Pfam PF13657 HipA N-terminal domain 6 95 1.0E-13 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL504_RS22300 40df0dcd44f79c189bfc0737423340cb 420 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 99 7.0E-14 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL504_RS22300 40df0dcd44f79c189bfc0737423340cb 420 Pfam PF07804 HipA-like C-terminal domain 142 374 8.4E-47 T 28-03-2018 IPR012893 HipA-like, C-terminal AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 SUPERFAMILY SSF51735 9 255 1.03E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 5.9E-81 T 28-03-2018 AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 Gene3D G3DSA:3.40.50.720 3 256 3.9E-45 T 28-03-2018 AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 PIRSF PIRSF000094 4 257 2.4E-87 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25790 1d6a8057bde7d860ddde8d7b60471e30 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00730 48dd28c6106c77f7a5071465a966a23f 302 Gene3D G3DSA:3.40.570.10 98 302 3.2E-50 T 28-03-2018 AL504_RS00730 48dd28c6106c77f7a5071465a966a23f 302 SMART SM00892 115 302 3.7E-33 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AL504_RS00730 48dd28c6106c77f7a5071465a966a23f 302 Pfam PF01223 DNA/RNA non-specific endonuclease 113 267 9.5E-41 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AL504_RS00730 48dd28c6106c77f7a5071465a966a23f 302 SMART SM00477 116 302 4.9E-18 T 28-03-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AL504_RS00730 48dd28c6106c77f7a5071465a966a23f 302 SUPERFAMILY SSF54060 92 301 2.3E-55 T 28-03-2018 AL504_RS27155 5ee9c139a7f469b6fae1daee6d744b57 358 SUPERFAMILY SSF53659 3 354 4.61E-114 T 28-03-2018 AL504_RS27155 5ee9c139a7f469b6fae1daee6d744b57 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL504_RS27155 5ee9c139a7f469b6fae1daee6d744b57 358 Gene3D G3DSA:3.40.718.10 1 212 1.3E-60 T 28-03-2018 AL504_RS27155 5ee9c139a7f469b6fae1daee6d744b57 358 Gene3D G3DSA:3.40.718.10 213 355 9.8E-57 T 28-03-2018 AL504_RS27155 5ee9c139a7f469b6fae1daee6d744b57 358 SMART SM01329 6 350 3.9E-172 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS27155 5ee9c139a7f469b6fae1daee6d744b57 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 349 4.4E-85 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS27155 5ee9c139a7f469b6fae1daee6d744b57 358 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 4 353 9.8E-166 T 28-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 AL504_RS00100 c029c43a602f8c85238db3a38b3dc453 185 SMART SM00987 52 165 5.4E-9 T 28-03-2018 AL504_RS00100 c029c43a602f8c85238db3a38b3dc453 185 Pfam PF03167 Uracil DNA glycosylase superfamily 55 136 1.4E-11 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS00100 c029c43a602f8c85238db3a38b3dc453 185 SUPERFAMILY SSF52141 28 137 4.19E-32 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS00100 c029c43a602f8c85238db3a38b3dc453 185 Gene3D G3DSA:3.40.470.10 22 144 1.8E-27 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS00100 c029c43a602f8c85238db3a38b3dc453 185 SMART SM00986 52 165 5.4E-9 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS09285 99fc281b63eb69d92efbd13de3021ca1 446 Gene3D G3DSA:3.90.1150.10 2 183 7.3E-45 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS09285 99fc281b63eb69d92efbd13de3021ca1 446 PIRSF PIRSF000521 18 438 4.5E-37 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09285 99fc281b63eb69d92efbd13de3021ca1 446 Pfam PF00202 Aminotransferase class-III 16 436 3.0E-105 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09285 99fc281b63eb69d92efbd13de3021ca1 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09285 99fc281b63eb69d92efbd13de3021ca1 446 SUPERFAMILY SSF53383 6 438 1.66E-127 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS09285 99fc281b63eb69d92efbd13de3021ca1 446 Gene3D G3DSA:3.40.640.10 184 313 4.0E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS09285 99fc281b63eb69d92efbd13de3021ca1 446 Gene3D G3DSA:3.90.1150.10 314 440 2.0E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 Pfam PF00701 Dihydrodipicolinate synthetase family 11 297 1.1E-102 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 143 173 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 48 65 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 15 297 6.6E-107 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 11 297 66.248 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 SUPERFAMILY SSF51569 11 299 3.56E-103 T 28-03-2018 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 SMART SM01130 11 299 2.0E-140 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 Gene3D G3DSA:3.20.20.70 2 301 3.3E-98 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 PIRSF PIRSF001365 7 301 9.8E-96 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 81 99 1.1E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 45 66 1.1E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 113 129 1.1E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS27755 9d1ace40a10fe4879368d86297ad0267 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 138 155 1.1E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS08200 1d4b4834aaf4c6234cdcc76a53ddf19f 292 Gene3D G3DSA:3.40.630.40 1 285 6.0E-84 T 28-03-2018 AL504_RS08200 1d4b4834aaf4c6234cdcc76a53ddf19f 292 SUPERFAMILY SSF53187 9 281 1.73E-83 T 28-03-2018 AL504_RS08200 1d4b4834aaf4c6234cdcc76a53ddf19f 292 Pfam PF05013 N-formylglutamate amidohydrolase 20 252 5.4E-65 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase AL504_RS15695 2742346446286e990460a8540bc4a410 299 Gene3D G3DSA:3.40.190.10 182 265 2.2E-17 T 28-03-2018 AL504_RS15695 2742346446286e990460a8540bc4a410 299 Gene3D G3DSA:3.40.190.10 93 181 5.9E-25 T 28-03-2018 AL504_RS15695 2742346446286e990460a8540bc4a410 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15695 2742346446286e990460a8540bc4a410 299 Gene3D G3DSA:1.10.10.10 3 88 3.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15695 2742346446286e990460a8540bc4a410 299 SUPERFAMILY SSF46785 8 115 6.33E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15695 2742346446286e990460a8540bc4a410 299 SUPERFAMILY SSF53850 93 293 1.33E-38 T 28-03-2018 AL504_RS15695 2742346446286e990460a8540bc4a410 299 Pfam PF03466 LysR substrate binding domain 93 291 4.6E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS15695 2742346446286e990460a8540bc4a410 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15695 2742346446286e990460a8540bc4a410 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15695 2742346446286e990460a8540bc4a410 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24000 94d6fe257620a0961d9f757452a0fbb9 303 Gene3D G3DSA:3.40.190.10 184 270 1.2E-21 T 28-03-2018 AL504_RS24000 94d6fe257620a0961d9f757452a0fbb9 303 SUPERFAMILY SSF46785 8 85 3.13E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24000 94d6fe257620a0961d9f757452a0fbb9 303 Gene3D G3DSA:1.10.10.10 4 91 4.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24000 94d6fe257620a0961d9f757452a0fbb9 303 Gene3D G3DSA:3.40.190.10 95 183 1.2E-18 T 28-03-2018 AL504_RS24000 94d6fe257620a0961d9f757452a0fbb9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.0E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24000 94d6fe257620a0961d9f757452a0fbb9 303 SUPERFAMILY SSF53850 99 298 3.98E-37 T 28-03-2018 AL504_RS24000 94d6fe257620a0961d9f757452a0fbb9 303 Pfam PF03466 LysR substrate binding domain 98 295 3.3E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 SUPERFAMILY SSF51126 29 267 4.47E-60 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 SMART SM00656 53 262 4.7E-20 T 28-03-2018 IPR002022 Pectate lyase AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 Gene3D G3DSA:2.160.20.10 24 371 4.4E-60 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 PRINTS PR00807 Pollen allergen Amb family signature 217 236 6.4E-11 T 28-03-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 PRINTS PR00807 Pollen allergen Amb family signature 239 258 6.4E-11 T 28-03-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 PRINTS PR00807 Pollen allergen Amb family signature 29 46 6.4E-11 T 28-03-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 PRINTS PR00807 Pollen allergen Amb family signature 86 102 6.4E-11 T 28-03-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 AL504_RS04660 3ff9dbbf37fcd6d419076d655c3d8597 387 Pfam PF00544 Pectate lyase 85 256 1.9E-22 T 28-03-2018 IPR002022 Pectate lyase AL504_RS12925 83bc295a780615f96b5dece7cd0a8b1f 331 PIRSF PIRSF027386 2 331 6.0E-69 T 28-03-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type AL504_RS12925 83bc295a780615f96b5dece7cd0a8b1f 331 Gene3D G3DSA:3.40.190.10 121 285 1.6E-10 T 28-03-2018 AL504_RS12925 83bc295a780615f96b5dece7cd0a8b1f 331 SUPERFAMILY SSF53850 34 312 1.5E-24 T 28-03-2018 AL504_RS12925 83bc295a780615f96b5dece7cd0a8b1f 331 Gene3D G3DSA:3.40.190.10 28 120 4.7E-5 T 28-03-2018 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 5 335 8.1E-120 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PIRSF PIRSF003161 2 336 2.4E-117 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 Gene3D G3DSA:1.10.220.30 198 336 6.6E-34 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 Gene3D G3DSA:1.10.220.30 73 194 1.5E-18 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 SUPERFAMILY SSF48029 9 106 9.42E-20 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 1.0E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 251 271 1.0E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 275 301 1.0E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 8 24 1.0E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 229 249 1.0E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 37 63 1.0E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 198 223 1.0E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 Pfam PF14841 FliG middle domain 119 192 2.3E-24 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 Gene3D G3DSA:1.10.220.30 11 72 2.9E-10 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 Pfam PF14842 FliG N-terminal domain 8 104 1.8E-29 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 Pfam PF01706 FliG C-terminal domain 221 327 1.7E-40 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AL504_RS06320 7c8b002413446e1aa3eebd25c5706eb4 336 SUPERFAMILY SSF48029 118 328 1.57E-65 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 Gene3D G3DSA:3.40.190.10 91 181 3.9E-22 T 28-03-2018 AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 59 7.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 SUPERFAMILY SSF53850 92 295 2.17E-37 T 28-03-2018 AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 Gene3D G3DSA:1.10.10.10 1 87 2.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 Pfam PF03466 LysR substrate binding domain 91 292 5.2E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 Gene3D G3DSA:3.40.190.10 182 264 5.1E-20 T 28-03-2018 AL504_RS30345 3dcf62734c564e8c8b78ab752529db67 304 SUPERFAMILY SSF46785 2 80 3.13E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 Gene3D G3DSA:3.40.630.10 170 501 2.7E-133 T 28-03-2018 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 SUPERFAMILY SSF52949 1 184 2.18E-30 T 28-03-2018 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 20 142 5.7E-20 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 SUPERFAMILY SSF53187 179 499 1.91E-118 T 28-03-2018 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 501 36.059 T 28-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 354 361 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 Gene3D G3DSA:3.40.220.10 1 162 5.8E-23 T 28-03-2018 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 PRINTS PR00481 Cytosol aminopeptidase signature 378 393 4.8E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 PRINTS PR00481 Cytosol aminopeptidase signature 291 312 4.8E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 PRINTS PR00481 Cytosol aminopeptidase signature 328 349 4.8E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 PRINTS PR00481 Cytosol aminopeptidase signature 269 286 4.8E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 PRINTS PR00481 Cytosol aminopeptidase signature 350 370 4.8E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL504_RS12045 f464f306926b66ff5764fe31a0fc25bb 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 493 3.5E-121 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Gene3D G3DSA:2.20.25.90 34 100 1.0E-13 T 28-03-2018 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 64 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Gene3D G3DSA:3.40.50.740 101 296 4.2E-41 T 28-03-2018 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Gene3D G3DSA:2.40.40.20 670 831 3.6E-35 T 28-03-2018 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 SUPERFAMILY SSF53706 38 705 1.27E-201 T 28-03-2018 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Hamap MF_01630 Nitrate reductase [napA]. 1 831 29.106 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 SUPERFAMILY SSF50692 691 831 1.47E-41 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 2.1E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Gene3D G3DSA:3.40.50.740 306 669 2.5E-65 T 28-03-2018 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Pfam PF00384 Molybdopterin oxidoreductase 98 571 2.7E-96 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 831 0.0 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 SMART SM00926 41 95 1.8E-12 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 Pfam PF01568 Molydopterin dinucleotide binding domain 717 825 8.9E-24 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS07480 ae1bbb8686f38338bc06c263d1c539df 831 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 26 0.0013 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL504_RS18620 340ccae4fc3f9829f6da89821fa4b559 243 Gene3D G3DSA:3.30.70.1070 164 243 1.1E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS18620 340ccae4fc3f9829f6da89821fa4b559 243 SUPERFAMILY SSF110997 167 242 3.14E-17 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS18620 340ccae4fc3f9829f6da89821fa4b559 243 Pfam PF05036 Sporulation related domain 167 241 2.2E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS09950 5be40abe597f5f17035e28a28850c56a 650 Gene3D G3DSA:3.40.720.10 105 427 2.4E-19 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS09950 5be40abe597f5f17035e28a28850c56a 650 Pfam PF05506 Domain of unknown function (DUF756) 459 545 5.4E-21 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS09950 5be40abe597f5f17035e28a28850c56a 650 Pfam PF05506 Domain of unknown function (DUF756) 562 629 1.0E-6 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS09950 5be40abe597f5f17035e28a28850c56a 650 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 7 446 5.9E-191 T 28-03-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS09950 5be40abe597f5f17035e28a28850c56a 650 Pfam PF04185 Phosphoesterase family 35 422 7.9E-116 T 28-03-2018 IPR007312 Phosphoesterase GO:0016788 AL504_RS11925 531a3be3d465bf8f8a0a1eb7b9b64525 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 78 2.3E-13 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL504_RS11925 531a3be3d465bf8f8a0a1eb7b9b64525 291 Pfam PF01380 SIS domain 135 243 1.5E-14 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS11925 531a3be3d465bf8f8a0a1eb7b9b64525 291 Gene3D G3DSA:1.10.10.10 2 82 5.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11925 531a3be3d465bf8f8a0a1eb7b9b64525 291 SUPERFAMILY SSF53697 101 265 4.89E-24 T 28-03-2018 AL504_RS11925 531a3be3d465bf8f8a0a1eb7b9b64525 291 SUPERFAMILY SSF46689 7 79 4.84E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS11925 531a3be3d465bf8f8a0a1eb7b9b64525 291 Gene3D G3DSA:3.40.50.10490 88 279 6.3E-25 T 28-03-2018 AL504_RS22350 788816f9da23dd4b1980d4a9fde3bbb4 278 Gene3D G3DSA:1.10.10.10 6 79 1.6E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22350 788816f9da23dd4b1980d4a9fde3bbb4 278 SMART SM00346 21 108 5.2E-15 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS22350 788816f9da23dd4b1980d4a9fde3bbb4 278 Pfam PF09339 IclR helix-turn-helix domain 23 70 4.4E-11 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS22350 788816f9da23dd4b1980d4a9fde3bbb4 278 Gene3D G3DSA:3.30.450.40 91 270 1.2E-51 T 28-03-2018 IPR029016 GAF domain-like AL504_RS22350 788816f9da23dd4b1980d4a9fde3bbb4 278 Pfam PF01614 Bacterial transcriptional regulator 138 261 1.4E-20 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS22350 788816f9da23dd4b1980d4a9fde3bbb4 278 SUPERFAMILY SSF55781 84 265 2.81E-45 T 28-03-2018 IPR029016 GAF domain-like AL504_RS22350 788816f9da23dd4b1980d4a9fde3bbb4 278 SUPERFAMILY SSF46785 22 91 2.55E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10130 65c95accd9baab3b549cf80bea594f6f 223 Pfam PF00072 Response regulator receiver domain 3 112 4.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS10130 65c95accd9baab3b549cf80bea594f6f 223 SUPERFAMILY SSF52172 1 170 8.4E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS10130 65c95accd9baab3b549cf80bea594f6f 223 SMART SM00862 145 218 9.4E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS10130 65c95accd9baab3b549cf80bea594f6f 223 SMART SM00448 1 112 2.0E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS10130 65c95accd9baab3b549cf80bea594f6f 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 4.7E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS10130 65c95accd9baab3b549cf80bea594f6f 223 Gene3D G3DSA:3.40.50.2300 1 118 4.8E-37 T 28-03-2018 AL504_RS10130 65c95accd9baab3b549cf80bea594f6f 223 Gene3D G3DSA:1.10.10.10 119 223 5.4E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27465 0e968abe2f19540e20e75d7118b19e3e 324 Gene3D G3DSA:3.40.190.10 124 319 1.1E-8 T 28-03-2018 AL504_RS27465 0e968abe2f19540e20e75d7118b19e3e 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 320 6.7E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS27465 0e968abe2f19540e20e75d7118b19e3e 324 PIRSF PIRSF017082 2 324 1.7E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS27465 0e968abe2f19540e20e75d7118b19e3e 324 SUPERFAMILY SSF53850 115 283 1.09E-12 T 28-03-2018 AL504_RS27685 5a7989e47dc8fa5068e09ee09d96ec32 123 SUPERFAMILY SSF50249 15 122 8.57E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS27685 5a7989e47dc8fa5068e09ee09d96ec32 123 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 17 122 2.9E-43 T 28-03-2018 IPR008231 Probable chaperone CsaA AL504_RS27685 5a7989e47dc8fa5068e09ee09d96ec32 123 Gene3D G3DSA:2.40.50.140 11 123 1.3E-19 T 28-03-2018 AL504_RS27685 5a7989e47dc8fa5068e09ee09d96ec32 123 Pfam PF01588 Putative tRNA binding domain 25 120 4.8E-11 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 Gene3D G3DSA:3.40.630.10 1 309 3.3E-61 T 28-03-2018 AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 Pfam PF01546 Peptidase family M20/M25/M40 108 425 4.9E-31 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 SUPERFAMILY SSF53187 345 429 2.2E-58 T 28-03-2018 AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 SUPERFAMILY SSF53187 16 214 2.2E-58 T 28-03-2018 AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 Gene3D G3DSA:3.40.630.10 310 429 5.0E-6 T 28-03-2018 AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 SUPERFAMILY SSF55031 215 327 1.4E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 31 415 1.2E-86 T 28-03-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase AL504_RS00425 e117e4fc1d336d95718d7fdebcdeec8d 438 Pfam PF07687 Peptidase dimerisation domain 212 322 1.2E-14 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 Gene3D G3DSA:3.40.190.10 94 180 5.8E-23 T 28-03-2018 AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 SUPERFAMILY SSF53850 95 298 6.88E-45 T 28-03-2018 AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 8.2E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 SUPERFAMILY SSF46785 5 116 1.61E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 Gene3D G3DSA:3.40.190.10 181 271 3.0E-25 T 28-03-2018 AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 Gene3D G3DSA:1.10.10.10 1 88 6.5E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25310 5b94231aa252c28fc6db115ebc68166a 308 Pfam PF03466 LysR substrate binding domain 92 296 1.5E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 SUPERFAMILY SSF51206 34 156 7.59E-20 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 SMART SM00100 20 146 1.1E-11 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 Gene3D G3DSA:1.10.10.10 160 238 5.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 Pfam PF00027 Cyclic nucleotide-binding domain 44 130 8.5E-12 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 Pfam PF13545 Crp-like helix-turn-helix domain 163 231 8.0E-16 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 SUPERFAMILY SSF46785 160 232 6.65E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 SMART SM00419 176 224 4.8E-8 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS12930 146f765a445cedaa378a806ef1ed745f 239 Gene3D G3DSA:2.60.120.10 11 159 9.3E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS19080 67f7d6aea7266bb588bb82d894162735 304 Gene3D G3DSA:3.40.250.10 199 304 3.8E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19080 67f7d6aea7266bb588bb82d894162735 304 SMART SM00450 206 303 2.5E-11 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19080 67f7d6aea7266bb588bb82d894162735 304 Pfam PF00581 Rhodanese-like domain 207 299 5.8E-11 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19080 67f7d6aea7266bb588bb82d894162735 304 Pfam PF09335 SNARE associated Golgi protein 29 152 7.2E-14 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL504_RS19080 67f7d6aea7266bb588bb82d894162735 304 SUPERFAMILY SSF52821 185 303 5.37E-22 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 SUPERFAMILY SSF48008 125 262 8.63E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 SUPERFAMILY SSF46785 37 108 1.55E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 Pfam PF07729 FCD domain 130 254 1.7E-25 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 78 1.6E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 78 94 1.6E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 Pfam PF00392 Bacterial regulatory proteins, gntR family 42 104 2.7E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 Gene3D G3DSA:1.10.10.10 35 106 1.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 SMART SM00895 128 255 1.0E-22 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 SMART SM00345 45 104 2.4E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS06980 5b521a28a3aaf0cd6060342ddae9bc8c 267 Gene3D G3DSA:1.20.120.530 119 267 3.1E-30 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS22270 c8e1db3078e6e9f28675f6784634adc4 100 Gene3D G3DSA:1.10.10.10 4 53 0.016 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22270 c8e1db3078e6e9f28675f6784634adc4 100 Gene3D G3DSA:1.10.260.40 78 95 0.22 T 28-03-2018 AL504_RS22270 c8e1db3078e6e9f28675f6784634adc4 100 Gene3D G3DSA:1.10.260.40 54 77 8.5E-4 T 28-03-2018 AL504_RS22270 c8e1db3078e6e9f28675f6784634adc4 100 SUPERFAMILY SSF47413 29 90 2.2E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS22270 c8e1db3078e6e9f28675f6784634adc4 100 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 4 90 2.0E-31 T 28-03-2018 IPR014057 Addiction module antidote protein, HI1420 AL504_RS23345 cf020cec401dab786aac336a13393f07 127 SUPERFAMILY SSF141673 6 124 4.97E-29 T 28-03-2018 AL504_RS23345 cf020cec401dab786aac336a13393f07 127 Pfam PF03476 MOSC N-terminal beta barrel domain 21 109 8.3E-11 T 28-03-2018 IPR005303 MOSC, N-terminal beta barrel AL504_RS11165 c852b06784efa90d61f32a350544c25a 282 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 19 282 5.2E-133 T 28-03-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 AL504_RS11165 c852b06784efa90d61f32a350544c25a 282 Pfam PF03301 Tryptophan 2,3-dioxygenase 14 280 1.1E-67 T 28-03-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AL504_RS11165 c852b06784efa90d61f32a350544c25a 282 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 19 282 41.23 T 28-03-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AL504_RS11165 c852b06784efa90d61f32a350544c25a 282 SUPERFAMILY SSF140959 25 281 8.11E-103 T 28-03-2018 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 SUPERFAMILY SSF54862 8 135 6.7E-27 T 28-03-2018 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 Pfam PF14697 4Fe-4S dicluster domain 79 133 8.8E-18 T 28-03-2018 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 Gene3D G3DSA:3.30.70.20 122 200 1.8E-5 T 28-03-2018 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 Gene3D G3DSA:3.30.70.20 7 90 6.0E-9 T 28-03-2018 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 141 1.6E-64 T 28-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 Pfam PF04060 Putative Fe-S cluster 14 46 3.8E-14 T 28-03-2018 IPR007202 4Fe-4S domain GO:0051536 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 Gene3D G3DSA:3.30.70.20 91 121 1.9E-12 T 28-03-2018 AL504_RS12300 43a01ff73ed9fae299671e973d513e20 214 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 116 127 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS29790 960c005cf96e6cba085a11fecff6a857 365 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 187 332 5.6E-29 T 28-03-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 AL504_RS29790 960c005cf96e6cba085a11fecff6a857 365 Gene3D G3DSA:1.10.1040.10 197 351 1.1E-34 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS29790 960c005cf96e6cba085a11fecff6a857 365 SUPERFAMILY SSF51735 1 147 8.27E-16 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29790 960c005cf96e6cba085a11fecff6a857 365 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 106 2.2E-6 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL504_RS29790 960c005cf96e6cba085a11fecff6a857 365 SUPERFAMILY SSF48179 189 361 3.37E-45 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS29790 960c005cf96e6cba085a11fecff6a857 365 Gene3D G3DSA:3.40.50.720 1 192 2.2E-23 T 28-03-2018 AL504_RS21695 dd2b9aa03acd346450592da2564a700c 267 SMART SM00346 11 100 4.4E-4 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS21695 dd2b9aa03acd346450592da2564a700c 267 SUPERFAMILY SSF46785 14 76 1.06E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21695 dd2b9aa03acd346450592da2564a700c 267 SUPERFAMILY SSF55781 75 246 3.6E-29 T 28-03-2018 IPR029016 GAF domain-like AL504_RS21695 dd2b9aa03acd346450592da2564a700c 267 Pfam PF09339 IclR helix-turn-helix domain 14 63 3.9E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS21695 dd2b9aa03acd346450592da2564a700c 267 Gene3D G3DSA:1.10.10.10 1 73 1.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21695 dd2b9aa03acd346450592da2564a700c 267 Gene3D G3DSA:3.30.450.40 84 257 2.5E-27 T 28-03-2018 IPR029016 GAF domain-like AL504_RS21695 dd2b9aa03acd346450592da2564a700c 267 Pfam PF01614 Bacterial transcriptional regulator 133 245 2.6E-10 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SUPERFAMILY SSF141259 480 557 7.72E-23 T 28-03-2018 IPR003711 CarD-like/TRCF domain AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SUPERFAMILY SSF52540 532 792 4.36E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1119 28.201 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SMART SM00490 835 919 1.1E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SMART SM01058 488 585 2.5E-45 T 28-03-2018 IPR003711 CarD-like/TRCF domain AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SUPERFAMILY SSF143517 1003 1153 1.57E-38 T 28-03-2018 AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 Gene3D G3DSA:3.40.50.300 797 965 1.9E-26 T 28-03-2018 AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SUPERFAMILY SSF52540 358 471 6.55E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SUPERFAMILY SSF52540 32 353 5.84E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 Pfam PF02559 CarD-like/TRCF domain 489 584 1.9E-25 T 28-03-2018 IPR003711 CarD-like/TRCF domain AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 Pfam PF03461 TRCF domain 1018 1111 1.5E-26 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 Pfam PF00271 Helicase conserved C-terminal domain 814 918 2.0E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 162 1090 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SMART SM00487 609 799 4.1E-33 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SMART SM00982 1017 1117 1.9E-48 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 SUPERFAMILY SSF52540 792 999 1.7E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 Gene3D G3DSA:3.40.50.300 339 790 1.1E-38 T 28-03-2018 AL504_RS12475 3d00b43cebc98395bb6f7c1489f9e7a3 1154 Pfam PF00270 DEAD/DEAH box helicase 614 771 2.3E-17 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS18315 b21667c5313287daed28be39d45edc76 303 SUPERFAMILY SSF46785 1 84 2.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18315 b21667c5313287daed28be39d45edc76 303 Gene3D G3DSA:3.40.190.10 88 174 2.2E-16 T 28-03-2018 AL504_RS18315 b21667c5313287daed28be39d45edc76 303 Gene3D G3DSA:1.10.10.10 1 82 1.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18315 b21667c5313287daed28be39d45edc76 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.6E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18315 b21667c5313287daed28be39d45edc76 303 SUPERFAMILY SSF53850 91 290 1.99E-30 T 28-03-2018 AL504_RS18315 b21667c5313287daed28be39d45edc76 303 Pfam PF03466 LysR substrate binding domain 87 289 2.7E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS18315 b21667c5313287daed28be39d45edc76 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18315 b21667c5313287daed28be39d45edc76 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18315 b21667c5313287daed28be39d45edc76 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18315 b21667c5313287daed28be39d45edc76 303 Gene3D G3DSA:3.40.190.10 175 265 6.2E-14 T 28-03-2018 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 SUPERFAMILY SSF51905 5 171 2.02E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 SUPERFAMILY SSF51905 286 359 2.02E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 3.2E-15 T 28-03-2018 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.2E-15 T 28-03-2018 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.2E-15 T 28-03-2018 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 Pfam PF01494 FAD binding domain 295 326 1.2E-5 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 Pfam PF01494 FAD binding domain 7 170 7.1E-8 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS24320 cde1bfed2ad93479bd67ec83f12bfc41 386 Gene3D G3DSA:3.50.50.60 2 383 1.0E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05270 ba99d5bf838c67c4abad4393b0440a8a 112 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 15 104 5.2E-22 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AL504_RS05270 ba99d5bf838c67c4abad4393b0440a8a 112 Pfam PF03334 Na+/H+ antiporter subunit 16 96 1.6E-20 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AL504_RS02695 a5349d7bba3af795d8de8fe8020900ab 227 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 227 1.1E-76 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AL504_RS02695 a5349d7bba3af795d8de8fe8020900ab 227 Gene3D G3DSA:1.20.950.20 1 216 5.9E-44 T 28-03-2018 AL504_RS02695 a5349d7bba3af795d8de8fe8020900ab 227 Pfam PF02665 Nitrate reductase gamma subunit 5 227 2.2E-80 T 28-03-2018 IPR023234 NarG-like domain AL504_RS02695 a5349d7bba3af795d8de8fe8020900ab 227 SUPERFAMILY SSF103501 1 226 1.05E-65 T 28-03-2018 IPR023234 NarG-like domain AL504_RS02075 6362bbc5494b40c25c7440be5a42e75a 320 SUPERFAMILY SSF53850 107 282 2.58E-14 T 28-03-2018 AL504_RS02075 6362bbc5494b40c25c7440be5a42e75a 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 316 2.3E-82 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02075 6362bbc5494b40c25c7440be5a42e75a 320 Gene3D G3DSA:3.40.190.10 2 293 1.6E-8 T 28-03-2018 AL504_RS02075 6362bbc5494b40c25c7440be5a42e75a 320 PIRSF PIRSF017082 1 320 1.3E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 SUPERFAMILY SSF46785 19 158 5.0E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 Pfam PF12802 MarR family 51 108 1.8E-10 T 28-03-2018 AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 SMART SM00347 45 145 3.4E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 Gene3D G3DSA:1.10.10.10 1 166 3.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 8.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 8.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 8.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09400 966dbadadfc37e5362523d65e598877f 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 8.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS30060 4aa73c0644715273eb69512bb84c72e1 82 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 1.7E-30 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL504_RS30060 4aa73c0644715273eb69512bb84c72e1 82 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 65 2.0E-19 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL504_RS02420 60d38584561fdfad50a4d69390af9b98 308 Pfam PF01515 Phosphate acetyl/butaryl transferase 84 298 1.8E-48 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL504_RS02420 60d38584561fdfad50a4d69390af9b98 308 PIRSF PIRSF000428 2 303 1.6E-83 T 28-03-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL504_RS02420 60d38584561fdfad50a4d69390af9b98 308 Gene3D G3DSA:3.40.50.10750 120 274 1.2E-45 T 28-03-2018 AL504_RS02420 60d38584561fdfad50a4d69390af9b98 308 SUPERFAMILY SSF53659 10 301 1.36E-64 T 28-03-2018 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 SUPERFAMILY SSF51905 472 533 1.05E-92 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 SUPERFAMILY SSF51905 1 288 1.05E-92 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 Pfam PF05199 GMC oxidoreductase 387 525 2.6E-41 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 Gene3D G3DSA:4.10.450.10 43 104 1.7E-31 T 28-03-2018 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 Pfam PF00732 GMC oxidoreductase 5 295 9.2E-90 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 PIRSF PIRSF000137 2 540 5.9E-156 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 SUPERFAMILY SSF54373 290 473 4.12E-61 T 28-03-2018 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 Gene3D G3DSA:3.30.560.10 105 488 7.3E-110 T 28-03-2018 AL504_RS05955 8319a97f33c27f670d9ea77c6f880131 550 Gene3D G3DSA:3.40.50.720 1 42 0.0018 T 28-03-2018 AL504_RS16495 21d0e3d352ed23ed2e9c222f5dc791fe 167 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 144 160 - T 28-03-2018 IPR028871 Blue (type 1) copper protein, binding site AL504_RS16495 21d0e3d352ed23ed2e9c222f5dc791fe 167 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 66 165 3.0E-5 T 28-03-2018 AL504_RS16495 21d0e3d352ed23ed2e9c222f5dc791fe 167 Gene3D G3DSA:2.60.40.420 56 167 8.3E-19 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16495 21d0e3d352ed23ed2e9c222f5dc791fe 167 SUPERFAMILY SSF49503 56 166 3.88E-30 T 28-03-2018 IPR008972 Cupredoxin AL504_RS16495 21d0e3d352ed23ed2e9c222f5dc791fe 167 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 60 167 1.5E-10 T 28-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 SMART SM00382 361 547 4.0E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 SUPERFAMILY SSF52540 327 568 4.93E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 Gene3D G3DSA:1.20.1560.10 2 324 4.7E-22 T 28-03-2018 AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 Pfam PF00664 ABC transporter transmembrane region 56 261 3.0E-11 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 Gene3D G3DSA:3.40.50.300 325 577 1.3E-72 T 28-03-2018 AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 SUPERFAMILY SSF90123 17 299 6.93E-35 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23705 ab9360b85a165c223be8290bae79d56a 589 Pfam PF00005 ABC transporter 352 501 3.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 SUPERFAMILY SSF46785 3 78 1.69E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 Gene3D G3DSA:1.10.10.10 1 62 7.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.9E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 SMART SM00895 76 207 1.4E-20 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 Pfam PF07729 FCD domain 78 205 2.6E-19 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 SMART SM00345 8 66 2.7E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 Gene3D G3DSA:1.20.120.530 63 224 1.8E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS21795 2d0f2792e353c6cda7a47c284e900dba 225 SUPERFAMILY SSF48008 73 208 1.12E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS02060 5a07c66d6137f34d2926e6abfb8e0407 287 Gene3D G3DSA:3.90.850.10 28 287 1.5E-73 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS02060 5a07c66d6137f34d2926e6abfb8e0407 287 SUPERFAMILY SSF56529 61 281 3.79E-73 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS02060 5a07c66d6137f34d2926e6abfb8e0407 287 Pfam PF10370 Domain of unknown function (DUF2437) 1 66 2.0E-6 T 28-03-2018 IPR018833 Domain of unknown function DUF2437 AL504_RS02060 5a07c66d6137f34d2926e6abfb8e0407 287 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 280 1.6E-60 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS19775 6b385288c1da328e73639f184bf9f285 396 Pfam PF13641 Glycosyltransferase like family 2 45 267 8.9E-25 T 28-03-2018 AL504_RS19775 6b385288c1da328e73639f184bf9f285 396 SUPERFAMILY SSF53448 45 280 3.72E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS19775 6b385288c1da328e73639f184bf9f285 396 Gene3D G3DSA:3.90.550.10 28 286 9.3E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 231 1.2E-49 T 28-03-2018 AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 6.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 6.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 6.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 6.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 6.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 SUPERFAMILY SSF51735 4 231 5.94E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS25335 b76792c3c6009afd348ae3c428536117 234 Gene3D G3DSA:3.40.50.720 1 234 5.4E-56 T 28-03-2018 AL504_RS23440 25483811a36f6e98b015de7da54ccc90 168 Pfam PF04608 Phosphatidylglycerophosphatase A 21 161 5.4E-46 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL504_RS23440 25483811a36f6e98b015de7da54ccc90 168 PIRSF PIRSF006162 11 167 7.7E-38 T 28-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL504_RS23440 25483811a36f6e98b015de7da54ccc90 168 SUPERFAMILY SSF101307 16 162 1.15E-34 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL504_RS23440 25483811a36f6e98b015de7da54ccc90 168 Gene3D G3DSA:1.10.3760.10 53 165 2.1E-35 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL504_RS22865 b2ca7026f55fd4a807843f1edf7b2806 170 SUPERFAMILY SSF88946 8 75 2.67E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22865 b2ca7026f55fd4a807843f1edf7b2806 170 Pfam PF08281 Sigma-70, region 4 109 161 3.4E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22865 b2ca7026f55fd4a807843f1edf7b2806 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 162 2.3E-20 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22865 b2ca7026f55fd4a807843f1edf7b2806 170 SUPERFAMILY SSF88659 85 164 4.14E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22865 b2ca7026f55fd4a807843f1edf7b2806 170 Pfam PF04542 Sigma-70 region 2 13 77 2.2E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22865 b2ca7026f55fd4a807843f1edf7b2806 170 Gene3D G3DSA:1.10.10.10 73 170 4.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22865 b2ca7026f55fd4a807843f1edf7b2806 170 Gene3D G3DSA:1.10.1740.10 6 72 9.2E-13 T 28-03-2018 AL504_RS04080 bb45cfe52c24afe3106d3ad0cb4ed1cf 327 Pfam PF16344 Domain of unknown function (DUF4974) 227 313 1.1E-8 T 28-03-2018 IPR032508 Protein FecR, C-terminal AL504_RS04080 bb45cfe52c24afe3106d3ad0cb4ed1cf 327 PIRSF PIRSF018266 6 326 1.7E-62 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS04080 bb45cfe52c24afe3106d3ad0cb4ed1cf 327 Pfam PF16220 Domain of unknown function (DUF4880) 17 58 2.2E-6 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS04080 bb45cfe52c24afe3106d3ad0cb4ed1cf 327 Pfam PF04773 FecR protein 124 216 6.3E-11 T 28-03-2018 IPR006860 FecR protein AL504_RS21135 3698f81c1b192933a6464ebea164936c 202 PIRSF PIRSF006118 19 192 5.7E-60 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL504_RS21135 3698f81c1b192933a6464ebea164936c 202 SUPERFAMILY SSF56784 29 186 4.07E-39 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21135 3698f81c1b192933a6464ebea164936c 202 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 32 183 3.8E-43 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL504_RS21135 3698f81c1b192933a6464ebea164936c 202 Pfam PF08282 haloacid dehalogenase-like hydrolase 97 165 1.3E-7 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21135 3698f81c1b192933a6464ebea164936c 202 Gene3D G3DSA:3.40.50.1000 25 193 7.7E-28 T 28-03-2018 IPR023214 HAD-like domain AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 SUPERFAMILY SSF53218 9 165 1.83E-42 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 SMART SM00852 12 156 2.9E-29 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 PIRSF PIRSF006443 1 164 5.6E-60 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 166 1.2E-76 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 70 83 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 Pfam PF00994 Probable molybdopterin binding domain 12 153 7.2E-32 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 9 150 2.5E-37 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25465 78f3440f632902927ece2d22b3e9c787 173 Gene3D G3DSA:3.40.980.10 7 169 1.7E-34 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS07535 5546f9684cc3b45ee0b99489036308e9 439 Pfam PF07719 Tetratricopeptide repeat 161 192 1.3E-7 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 AL504_RS07535 5546f9684cc3b45ee0b99489036308e9 439 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 121 9.7E-24 T 28-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AL504_RS07535 5546f9684cc3b45ee0b99489036308e9 439 SUPERFAMILY SSF48452 157 297 4.66E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS07535 5546f9684cc3b45ee0b99489036308e9 439 Gene3D G3DSA:1.25.40.10 206 283 2.7E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS07535 5546f9684cc3b45ee0b99489036308e9 439 SMART SM00028 161 194 1.4E-5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS07535 5546f9684cc3b45ee0b99489036308e9 439 SMART SM00028 232 265 30.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS07535 5546f9684cc3b45ee0b99489036308e9 439 Gene3D G3DSA:1.25.40.10 143 205 4.4E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS14820 a1a69bbab4b923a5b0ad00145a6971e3 92 SMART SM00151 17 92 9.5E-35 T 28-03-2018 IPR019835 SWIB domain Reactome: R-HSA-3214858 AL504_RS14820 a1a69bbab4b923a5b0ad00145a6971e3 92 Gene3D G3DSA:1.10.245.10 1 92 3.5E-30 T 28-03-2018 IPR003121 SWIB/MDM2 domain GO:0005515 AL504_RS14820 a1a69bbab4b923a5b0ad00145a6971e3 92 SUPERFAMILY SSF47592 12 91 2.62E-28 T 28-03-2018 IPR003121 SWIB/MDM2 domain GO:0005515 AL504_RS14820 a1a69bbab4b923a5b0ad00145a6971e3 92 Pfam PF02201 SWIB/MDM2 domain 19 91 1.3E-29 T 28-03-2018 IPR003121 SWIB/MDM2 domain GO:0005515 AL504_RS08495 b6547a163d9b532b0c5262a38f2f4563 352 Gene3D G3DSA:3.40.800.20 1 352 1.1E-79 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS08495 b6547a163d9b532b0c5262a38f2f4563 352 PRINTS PR01270 Histone deacetylase superfamily signature 166 189 1.1E-14 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS08495 b6547a163d9b532b0c5262a38f2f4563 352 PRINTS PR01270 Histone deacetylase superfamily signature 284 294 1.1E-14 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS08495 b6547a163d9b532b0c5262a38f2f4563 352 PRINTS PR01270 Histone deacetylase superfamily signature 198 213 1.1E-14 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS08495 b6547a163d9b532b0c5262a38f2f4563 352 SUPERFAMILY SSF52768 114 350 5.76E-84 T 28-03-2018 AL504_RS08495 b6547a163d9b532b0c5262a38f2f4563 352 SUPERFAMILY SSF52768 4 77 5.76E-84 T 28-03-2018 AL504_RS08495 b6547a163d9b532b0c5262a38f2f4563 352 Pfam PF00850 Histone deacetylase domain 46 347 1.7E-64 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS13305 934a5e38f6f9e41cdb5ca4078c4900aa 697 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 48 685 7.5E-234 T 28-03-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AL504_RS13305 934a5e38f6f9e41cdb5ca4078c4900aa 697 Pfam PF00474 Sodium:solute symporter family 495 610 1.2E-15 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL504_RS13305 934a5e38f6f9e41cdb5ca4078c4900aa 697 Pfam PF00474 Sodium:solute symporter family 73 232 3.1E-29 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL504_RS13305 934a5e38f6f9e41cdb5ca4078c4900aa 697 Gene3D G3DSA:3.40.50.720 210 660 5.4E-4 T 28-03-2018 AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 Gene3D G3DSA:1.10.10.10 10 61 3.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 SUPERFAMILY SSF54909 71 157 3.22E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 4.7E-20 T 28-03-2018 AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 Pfam PF01037 Lrp/AsnC ligand binding domain 76 149 3.2E-23 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 Gene3D G3DSA:3.30.70.920 62 156 8.3E-28 T 28-03-2018 AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 SUPERFAMILY SSF46785 9 69 3.65E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 3.8E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 3.8E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 3.8E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS01585 95a6ec45bf45d264e27c48762746d252 159 SMART SM00344 10 119 1.0E-48 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 SUPERFAMILY SSF55874 164 326 1.02E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 SMART SM00387 221 329 1.4E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 SMART SM00388 109 174 5.0E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 222 326 1.1E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 306 1.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 PRINTS PR00344 Bacterial sensor protein C-terminal signature 274 284 1.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 PRINTS PR00344 Bacterial sensor protein C-terminal signature 256 270 1.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 SUPERFAMILY SSF47384 92 173 4.32E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 Pfam PF00512 His Kinase A (phospho-acceptor) domain 109 172 3.2E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 Gene3D G3DSA:3.30.565.10 181 332 3.4E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10125 c3a0391dcb567188650f1f3ef52ee6ef 341 Gene3D G3DSA:1.10.287.130 99 170 1.7E-10 T 28-03-2018 AL504_RS09465 e62c494a73b4b89f8df1e54de92f477e 204 Hamap MF_00528 Septum formation protein Maf [maf]. 9 203 29.322 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS09465 e62c494a73b4b89f8df1e54de92f477e 204 SUPERFAMILY SSF52972 8 197 7.19E-57 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL504_RS09465 e62c494a73b4b89f8df1e54de92f477e 204 Gene3D G3DSA:3.90.950.10 6 203 2.3E-62 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL504_RS09465 e62c494a73b4b89f8df1e54de92f477e 204 Pfam PF02545 Maf-like protein 9 198 6.2E-51 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS09465 e62c494a73b4b89f8df1e54de92f477e 204 PIRSF PIRSF006305 1 203 4.1E-46 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS09465 e62c494a73b4b89f8df1e54de92f477e 204 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 197 1.3E-42 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL504_RS22505 82814185dcf65dec4c913dceb5836d73 486 SUPERFAMILY SSF75304 2 469 2.62E-113 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS22505 82814185dcf65dec4c913dceb5836d73 486 Pfam PF01425 Amidase 29 458 1.8E-80 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS22505 82814185dcf65dec4c913dceb5836d73 486 Gene3D G3DSA:3.90.1300.10 2 485 7.7E-115 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS22505 82814185dcf65dec4c913dceb5836d73 486 ProSitePatterns PS00571 Amidases signature. 149 180 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS06520 a5562abd85be3c1e3b61156a8bd4bdd7 166 Gene3D G3DSA:2.40.50.180 37 95 2.4E-18 T 28-03-2018 AL504_RS06520 a5562abd85be3c1e3b61156a8bd4bdd7 166 SMART SM00260 14 153 2.0E-40 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS06520 a5562abd85be3c1e3b61156a8bd4bdd7 166 Pfam PF01584 CheW-like domain 18 155 3.0E-36 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS06520 a5562abd85be3c1e3b61156a8bd4bdd7 166 Gene3D G3DSA:2.30.30.40 96 147 1.7E-17 T 28-03-2018 AL504_RS06520 a5562abd85be3c1e3b61156a8bd4bdd7 166 SUPERFAMILY SSF50341 18 158 2.22E-38 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS02985 87d42a4c209ce43eaab298b090a7b315 272 SUPERFAMILY SSF161098 59 255 9.94E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02985 87d42a4c209ce43eaab298b090a7b315 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 269 1.7E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02985 87d42a4c209ce43eaab298b090a7b315 272 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 161 2.4E-19 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS02985 87d42a4c209ce43eaab298b090a7b315 272 Gene3D G3DSA:1.10.3720.10 19 272 4.3E-33 T 28-03-2018 AL504_RS06710 df70efca8bfb5d54c4b9c3bb9125de16 301 Gene3D G3DSA:3.40.190.10 173 259 2.4E-21 T 28-03-2018 AL504_RS06710 df70efca8bfb5d54c4b9c3bb9125de16 301 SUPERFAMILY SSF53850 84 289 5.79E-35 T 28-03-2018 AL504_RS06710 df70efca8bfb5d54c4b9c3bb9125de16 301 Gene3D G3DSA:1.10.10.10 1 78 7.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06710 df70efca8bfb5d54c4b9c3bb9125de16 301 Pfam PF03466 LysR substrate binding domain 83 287 9.8E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS06710 df70efca8bfb5d54c4b9c3bb9125de16 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 4.3E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS06710 df70efca8bfb5d54c4b9c3bb9125de16 301 SUPERFAMILY SSF46785 2 103 1.36E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06710 df70efca8bfb5d54c4b9c3bb9125de16 301 Gene3D G3DSA:3.40.190.10 87 172 5.4E-10 T 28-03-2018 AL504_RS03180 be92474feb466814b60010724d200bfc 769 Gene3D G3DSA:2.170.130.10 102 244 4.5E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03180 be92474feb466814b60010724d200bfc 769 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 237 2.8E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03180 be92474feb466814b60010724d200bfc 769 Gene3D G3DSA:2.40.170.20 250 769 2.9E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03180 be92474feb466814b60010724d200bfc 769 Pfam PF00593 TonB dependent receptor 310 768 1.7E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03180 be92474feb466814b60010724d200bfc 769 SUPERFAMILY SSF56935 126 769 4.76E-123 T 28-03-2018 AL504_RS03180 be92474feb466814b60010724d200bfc 769 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 136 768 2.2E-103 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS03180 be92474feb466814b60010724d200bfc 769 SMART SM00965 47 98 1.0E-4 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 TIGRFAM TIGR00337 PyrG: CTP synthase 1 538 1.5E-240 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 Pfam PF00117 Glutamine amidotransferase class-I 305 537 1.1E-56 T 28-03-2018 IPR017926 Glutamine amidotransferase AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 Gene3D G3DSA:3.40.50.880 290 546 4.5E-75 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 SUPERFAMILY SSF52317 292 544 9.89E-87 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 Hamap MF_01227 CTP synthase [pyrG]. 2 543 50.947 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 Pfam PF06418 CTP synthase N-terminus 3 270 7.8E-125 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 SUPERFAMILY SSF52540 2 270 8.85E-121 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11875 bddf20c6cd10662b2a59bb463efcbb18 550 Gene3D G3DSA:3.40.50.300 1 289 1.1E-129 T 28-03-2018 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 Pfam PF03466 LysR substrate binding domain 92 295 2.4E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 SUPERFAMILY SSF53850 94 299 3.44E-29 T 28-03-2018 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 SUPERFAMILY SSF46785 5 115 8.71E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 Gene3D G3DSA:3.40.190.10 182 268 1.3E-16 T 28-03-2018 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 Gene3D G3DSA:3.40.190.10 92 181 1.8E-16 T 28-03-2018 AL504_RS19120 6af02c91605ea009a1d35d416db1e80e 307 Gene3D G3DSA:1.10.10.10 1 90 1.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 Pfam PF12802 MarR family 45 103 8.4E-11 T 28-03-2018 AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 SUPERFAMILY SSF46785 18 151 1.85E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 Gene3D G3DSA:1.10.10.10 5 154 1.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 129 149 4.3E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 4.3E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 4.3E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS13890 5c8a1aeba6b0afa43efac42387ab1e83 164 SMART SM00347 39 139 4.1E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 Gene3D G3DSA:1.10.287.950 326 521 1.7E-47 T 28-03-2018 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 Gene3D G3DSA:1.10.287.950 75 325 2.5E-19 T 28-03-2018 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 1.8E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 1.8E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 1.8E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 1.8E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 485 1.5E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 SUPERFAMILY SSF58104 237 518 1.31E-72 T 28-03-2018 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 142 3.3E-11 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL504_RS27630 a516313aa76fccf538cd887881b982de 535 SMART SM00304 217 269 7.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 SMART SM00283 270 517 7.2E-94 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS27630 a516313aa76fccf538cd887881b982de 535 Pfam PF00672 HAMP domain 217 260 2.9E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS18045 8a92fd90a1d0a442f9ee5dbb174d2d32 263 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 248 18.87 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL504_RS18045 8a92fd90a1d0a442f9ee5dbb174d2d32 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 111 137 2.7E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL504_RS18045 8a92fd90a1d0a442f9ee5dbb174d2d32 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 111 2.7E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL504_RS18045 8a92fd90a1d0a442f9ee5dbb174d2d32 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 14 41 2.7E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL504_RS18045 8a92fd90a1d0a442f9ee5dbb174d2d32 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 2.7E-49 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL504_RS18045 8a92fd90a1d0a442f9ee5dbb174d2d32 263 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 16 234 3.9E-68 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL504_RS18045 8a92fd90a1d0a442f9ee5dbb174d2d32 263 Pfam PF00902 Sec-independent protein translocase protein (TatC) 18 229 2.9E-66 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL504_RS03400 688382aa34c188c639138ca01057454c 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 175 361 7.7E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03400 688382aa34c188c639138ca01057454c 367 Gene3D G3DSA:1.10.3720.10 28 367 3.4E-39 T 28-03-2018 AL504_RS03400 688382aa34c188c639138ca01057454c 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 157 253 2.1E-18 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS03400 688382aa34c188c639138ca01057454c 367 SUPERFAMILY SSF161098 156 347 2.09E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS09955 5408d050185f27516141b523150758be 241 Gene3D G3DSA:1.20.58.220 1 115 2.4E-26 T 28-03-2018 AL504_RS09955 5408d050185f27516141b523150758be 241 PIRSF PIRSF003107 2 223 2.1E-65 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL504_RS09955 5408d050185f27516141b523150758be 241 Pfam PF01895 PhoU domain 124 209 5.4E-18 T 28-03-2018 IPR026022 PhoU domain AL504_RS09955 5408d050185f27516141b523150758be 241 Pfam PF01895 PhoU domain 21 106 6.1E-19 T 28-03-2018 IPR026022 PhoU domain AL504_RS09955 5408d050185f27516141b523150758be 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 217 5.4E-65 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL504_RS09955 5408d050185f27516141b523150758be 241 SUPERFAMILY SSF109755 7 226 5.76E-67 T 28-03-2018 AL504_RS09955 5408d050185f27516141b523150758be 241 Gene3D G3DSA:1.20.58.220 116 241 6.4E-30 T 28-03-2018 AL504_RS24115 cf8588dfab480076eeb418cdd85bc0f8 239 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 5 222 1.2E-120 T 28-03-2018 IPR014063 Arsenate resistance ArsH AL504_RS24115 cf8588dfab480076eeb418cdd85bc0f8 239 Pfam PF03358 NADPH-dependent FMN reductase 31 175 2.7E-27 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL504_RS24115 cf8588dfab480076eeb418cdd85bc0f8 239 Gene3D G3DSA:3.40.50.360 17 222 4.1E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS24115 cf8588dfab480076eeb418cdd85bc0f8 239 SUPERFAMILY SSF52218 20 224 3.35E-61 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.9E-32 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.1E-28 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 SUPERFAMILY SSF46557 4 78 7.06E-28 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.739 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 Gene3D G3DSA:1.10.287.180 3 76 2.3E-32 T 28-03-2018 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 8.3E-57 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 Gene3D G3DSA:3.10.50.30 78 158 5.4E-27 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 SUPERFAMILY SSF54534 83 157 2.09E-23 T 28-03-2018 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL504_RS26440 2b7e53c11c648cd6255ee0d3a815d939 158 PIRSF PIRSF006092 1 158 1.4E-52 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 31.511 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 SUPERFAMILY SSF55200 84 172 1.7E-34 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 SUPERFAMILY SSF54364 7 79 1.15E-28 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 Gene3D G3DSA:3.30.110.10 81 179 1.1E-37 T 28-03-2018 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 2.4E-39 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 Gene3D G3DSA:3.10.20.80 4 80 6.0E-30 T 28-03-2018 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 2.9E-29 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AL504_RS08410 a18d0e924db871f65df9a72c88b849a3 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 172 8.1E-70 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL504_RS07185 e0a34a34ee6cf91bdfb7648af0f1704a 395 Gene3D G3DSA:3.30.9.10 164 321 4.2E-31 T 28-03-2018 AL504_RS07185 e0a34a34ee6cf91bdfb7648af0f1704a 395 Pfam PF01266 FAD dependent oxidoreductase 5 360 7.0E-54 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS07185 e0a34a34ee6cf91bdfb7648af0f1704a 395 Gene3D G3DSA:3.40.50.720 1 65 7.5E-5 T 28-03-2018 AL504_RS07185 e0a34a34ee6cf91bdfb7648af0f1704a 395 SUPERFAMILY SSF51905 322 387 6.22E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07185 e0a34a34ee6cf91bdfb7648af0f1704a 395 SUPERFAMILY SSF51905 4 222 6.22E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07185 e0a34a34ee6cf91bdfb7648af0f1704a 395 Gene3D G3DSA:3.30.9.10 88 163 9.2E-8 T 28-03-2018 AL504_RS15685 79f9043a257cac8193ab9de7431f02e2 397 Pfam PF07690 Major Facilitator Superfamily 14 334 1.1E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS15685 79f9043a257cac8193ab9de7431f02e2 397 Gene3D G3DSA:1.20.1250.20 201 395 1.2E-24 T 28-03-2018 AL504_RS15685 79f9043a257cac8193ab9de7431f02e2 397 SUPERFAMILY SSF103473 9 391 3.79E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS15685 79f9043a257cac8193ab9de7431f02e2 397 Gene3D G3DSA:1.20.1250.20 6 189 2.9E-28 T 28-03-2018 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 Gene3D G3DSA:3.20.20.210 397 764 9.4E-126 T 28-03-2018 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 438 759 1.6E-156 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 Gene3D G3DSA:3.20.20.210 2 396 2.8E-149 T 28-03-2018 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 321 1.1E-118 T 28-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 SUPERFAMILY SSF51726 413 762 2.62E-116 T 28-03-2018 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 764 37.621 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 SUPERFAMILY SSF51726 5 401 9.42E-112 T 28-03-2018 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 763 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS10710 d6d294711080524e7d57ba6f1491ba99 765 PIRSF PIRSF000382 1 765 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 Gene3D G3DSA:1.10.287.130 219 279 1.1E-11 T 28-03-2018 AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 445 4.8E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 SMART SM00387 339 450 2.6E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 293 1.2E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 SUPERFAMILY SSF55874 284 448 2.75E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 SMART SM00388 229 294 7.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 Gene3D G3DSA:3.30.565.10 280 450 8.0E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 2.2E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 2.2E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 2.2E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00550 b55e17188e406226b4a651063719c0b8 452 SUPERFAMILY SSF47384 213 293 7.65E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS05255 1d5e2ea80ef355cf3a96069d61ca6adb 163 Gene3D G3DSA:3.40.140.10 5 163 2.1E-51 T 28-03-2018 AL504_RS05255 1d5e2ea80ef355cf3a96069d61ca6adb 163 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 15 157 47.276 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL504_RS05255 1d5e2ea80ef355cf3a96069d61ca6adb 163 Pfam PF14437 MafB19-like deaminase 11 157 3.6E-30 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL504_RS05255 1d5e2ea80ef355cf3a96069d61ca6adb 163 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL504_RS05255 1d5e2ea80ef355cf3a96069d61ca6adb 163 SUPERFAMILY SSF53927 8 157 1.38E-55 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL504_RS28530 5845744973b95ea69c5dc0d806654b12 303 Gene3D G3DSA:3.20.20.410 1 298 1.5E-71 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS28530 5845744973b95ea69c5dc0d806654b12 303 SUPERFAMILY SSF117396 1 296 4.84E-69 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS28530 5845744973b95ea69c5dc0d806654b12 303 Pfam PF01904 Protein of unknown function DUF72 22 293 1.2E-56 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS27550 ad88ac83232ee78f5ef590c29a35daf0 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 8.4E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS27550 ad88ac83232ee78f5ef590c29a35daf0 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 8.4E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS27550 ad88ac83232ee78f5ef590c29a35daf0 296 Pfam PF00561 alpha/beta hydrolase fold 36 163 7.6E-20 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS27550 ad88ac83232ee78f5ef590c29a35daf0 296 SUPERFAMILY SSF53474 11 293 2.98E-67 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27550 ad88ac83232ee78f5ef590c29a35daf0 296 Gene3D G3DSA:3.40.50.1820 12 296 5.6E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00810 5220bd55fd899b1c0ad2220c9c1803c2 214 Gene3D G3DSA:2.30.110.10 4 198 1.8E-49 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS00810 5220bd55fd899b1c0ad2220c9c1803c2 214 Pfam PF01613 Flavin reductase like domain 22 163 3.8E-25 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS00810 5220bd55fd899b1c0ad2220c9c1803c2 214 SUPERFAMILY SSF50475 2 197 1.57E-44 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS00810 5220bd55fd899b1c0ad2220c9c1803c2 214 SMART SM00903 19 171 1.5E-28 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS11655 9e424ad426e07307495623e6c2e870e4 210 SUPERFAMILY SSF49478 133 183 1.73E-5 T 28-03-2018 AL504_RS11655 9e424ad426e07307495623e6c2e870e4 210 Gene3D G3DSA:2.60.40.1120 130 210 4.4E-5 T 28-03-2018 AL504_RS11655 9e424ad426e07307495623e6c2e870e4 210 Pfam PF10670 Domain of unknown function (DUF4198) 87 183 1.4E-10 T 28-03-2018 IPR019613 Protein of unknown function DUF4198 AL504_RS30025 fe150b921be910f4e14fd15b3312f7a8 248 Gene3D G3DSA:3.40.190.10 118 193 3.4E-7 T 28-03-2018 AL504_RS30025 fe150b921be910f4e14fd15b3312f7a8 248 SUPERFAMILY SSF53850 34 233 3.19E-30 T 28-03-2018 AL504_RS30025 fe150b921be910f4e14fd15b3312f7a8 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 232 5.1E-20 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS30025 fe150b921be910f4e14fd15b3312f7a8 248 Gene3D G3DSA:3.40.190.10 7 117 9.4E-13 T 28-03-2018 AL504_RS30025 fe150b921be910f4e14fd15b3312f7a8 248 SMART SM00062 16 239 1.9E-19 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 SUPERFAMILY SSF64518 133 556 8.24E-35 T 28-03-2018 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 Gene3D G3DSA:1.20.5.50 69 192 4.8E-4 T 28-03-2018 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 510 556 3.1E-6 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 367 5.0E-78 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 364 386 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 214 232 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 523 547 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 476 497 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS06410 b35a5ca768003a18124a55d4f02429b6 558 PRINTS PR01005 Flagellar hook-associated protein signature 450 469 4.3E-41 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 Gene3D G3DSA:2.40.30.10 160 260 7.1E-28 T 28-03-2018 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 SUPERFAMILY SSF63380 151 262 5.11E-29 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 Pfam PF00042 Globin 7 103 8.4E-12 T 28-03-2018 IPR000971 Globin GO:0020037 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 Hamap MF_01252 Flavohemoprotein [hmp]. 1 404 55.952 T 28-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 Gene3D G3DSA:1.10.490.10 1 159 8.2E-46 T 28-03-2018 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 Pfam PF00970 Oxidoreductase FAD-binding domain 158 261 4.2E-6 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 Pfam PF00175 Oxidoreductase NAD-binding domain 272 380 3.4E-16 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 SUPERFAMILY SSF46458 1 144 2.33E-41 T 28-03-2018 IPR009050 Globin-like AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 SUPERFAMILY SSF52343 262 400 7.86E-37 T 28-03-2018 AL504_RS07960 a84ba9e9d4d4cfce99e2eb19a39d2e78 405 Gene3D G3DSA:3.40.50.80 261 403 1.6E-28 T 28-03-2018 AL504_RS27990 21d1ff1ac21a9e8814f1352e2a75b5c9 253 SMART SM00346 11 99 4.0E-5 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS27990 21d1ff1ac21a9e8814f1352e2a75b5c9 253 Gene3D G3DSA:1.10.10.10 1 73 2.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27990 21d1ff1ac21a9e8814f1352e2a75b5c9 253 SUPERFAMILY SSF55781 82 250 1.7E-32 T 28-03-2018 IPR029016 GAF domain-like AL504_RS27990 21d1ff1ac21a9e8814f1352e2a75b5c9 253 Gene3D G3DSA:3.30.450.40 77 252 8.5E-30 T 28-03-2018 IPR029016 GAF domain-like AL504_RS27990 21d1ff1ac21a9e8814f1352e2a75b5c9 253 Pfam PF09339 IclR helix-turn-helix domain 14 61 5.9E-11 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS27990 21d1ff1ac21a9e8814f1352e2a75b5c9 253 Pfam PF01614 Bacterial transcriptional regulator 133 243 1.8E-12 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS27990 21d1ff1ac21a9e8814f1352e2a75b5c9 253 SUPERFAMILY SSF46785 13 72 5.55E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 Pfam PF00108 Thiolase, N-terminal domain 5 263 3.1E-83 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 8.1E-42 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 PIRSF PIRSF000429 1 393 5.9E-109 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 Gene3D G3DSA:3.40.47.10 264 390 2.4E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 391 1.0E-123 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 SUPERFAMILY SSF53901 5 269 1.84E-75 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 Gene3D G3DSA:3.40.47.10 2 263 2.7E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29440 a36542ea5dd3c56d9b497771d7938c8b 393 SUPERFAMILY SSF53901 271 392 8.79E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS13085 cf139096f2487fdf158ebe6a551939bd 307 Pfam PF00795 Carbon-nitrogen hydrolase 5 277 9.3E-53 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS13085 cf139096f2487fdf158ebe6a551939bd 307 Gene3D G3DSA:3.60.110.10 1 305 1.3E-76 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS13085 cf139096f2487fdf158ebe6a551939bd 307 SUPERFAMILY SSF56317 1 296 4.19E-71 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS13085 cf139096f2487fdf158ebe6a551939bd 307 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 161 174 - T 28-03-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 PIRSF PIRSF000077 2 108 1.2E-44 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 Pfam PF00085 Thioredoxin 5 105 1.5E-34 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 Gene3D G3DSA:3.40.30.10 1 108 5.4E-37 T 28-03-2018 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 105 5.0E-39 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 PRINTS PR00421 Thioredoxin family signature 24 32 8.8E-10 T 28-03-2018 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 PRINTS PR00421 Thioredoxin family signature 32 41 8.8E-10 T 28-03-2018 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 PRINTS PR00421 Thioredoxin family signature 72 83 8.8E-10 T 28-03-2018 AL504_RS09315 7dbf18a6a339dda94682717016c51052 108 SUPERFAMILY SSF52833 3 108 6.49E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS08645 0e73e6ab97ac818e54c57606900958bd 495 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 9 463 8.2E-134 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 AL504_RS08645 0e73e6ab97ac818e54c57606900958bd 495 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 7 481 43.712 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 AL504_RS30730 f101d197d184ad1c854855a7afb04230 856 SMART SM00965 39 90 6.7E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS30730 f101d197d184ad1c854855a7afb04230 856 Gene3D G3DSA:2.170.130.10 112 246 4.9E-8 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30730 f101d197d184ad1c854855a7afb04230 856 SUPERFAMILY SSF56935 609 856 6.41E-53 T 28-03-2018 AL504_RS30730 f101d197d184ad1c854855a7afb04230 856 SUPERFAMILY SSF56935 279 579 6.41E-53 T 28-03-2018 AL504_RS30730 f101d197d184ad1c854855a7afb04230 856 SUPERFAMILY SSF56935 100 252 6.41E-53 T 28-03-2018 AL504_RS30730 f101d197d184ad1c854855a7afb04230 856 Gene3D G3DSA:2.40.170.20 261 856 5.0E-44 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS30730 f101d197d184ad1c854855a7afb04230 856 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 231 1.6E-6 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 Gene3D G3DSA:2.40.110.10 114 219 4.0E-29 T 28-03-2018 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 Gene3D G3DSA:1.10.540.10 3 113 1.2E-29 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 115 1.4E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 SUPERFAMILY SSF56645 5 243 3.8E-62 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 364 9.5E-34 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 PIRSF PIRSF016578 236 383 1.1E-6 T 28-03-2018 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 PIRSF PIRSF016578 2 195 4.2E-9 T 28-03-2018 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 218 1.1E-21 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 Gene3D G3DSA:1.20.140.10 220 386 5.6E-48 T 28-03-2018 AL504_RS04840 227417b94866a2b277c5c4a43f60e317 386 SUPERFAMILY SSF47203 229 384 2.74E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS08650 fe53e8e8f8287852ad7e7fda8c1d74dd 123 Pfam PF09842 Predicted membrane protein (DUF2069) 13 114 3.8E-35 T 28-03-2018 IPR018643 Protein of unknown function DUF2069, membrane AL504_RS27985 169878217a72635ade9c96921608d956 307 Pfam PF03466 LysR substrate binding domain 88 295 2.1E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS27985 169878217a72635ade9c96921608d956 307 SUPERFAMILY SSF53850 90 300 1.03E-47 T 28-03-2018 AL504_RS27985 169878217a72635ade9c96921608d956 307 Gene3D G3DSA:3.40.190.10 176 266 2.5E-24 T 28-03-2018 AL504_RS27985 169878217a72635ade9c96921608d956 307 Gene3D G3DSA:3.40.190.10 88 175 1.0E-18 T 28-03-2018 AL504_RS27985 169878217a72635ade9c96921608d956 307 SUPERFAMILY SSF46785 3 112 4.01E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27985 169878217a72635ade9c96921608d956 307 Gene3D G3DSA:1.10.10.10 3 84 1.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27985 169878217a72635ade9c96921608d956 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS12210 e1974f6af03fb3c79d17798e06c3f8d8 221 SUPERFAMILY SSF56784 1 213 7.09E-57 T 28-03-2018 IPR023214 HAD-like domain AL504_RS12210 e1974f6af03fb3c79d17798e06c3f8d8 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 119 182 9.4E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS12210 e1974f6af03fb3c79d17798e06c3f8d8 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 177 9.5E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS12210 e1974f6af03fb3c79d17798e06c3f8d8 221 Gene3D G3DSA:1.10.150.240 19 71 3.9E-15 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL504_RS12210 e1974f6af03fb3c79d17798e06c3f8d8 221 Gene3D G3DSA:3.40.50.1000 72 220 3.4E-32 T 28-03-2018 IPR023214 HAD-like domain AL504_RS12210 e1974f6af03fb3c79d17798e06c3f8d8 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 182 1.2E-34 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 SUPERFAMILY SSF54909 61 149 1.29E-19 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 9.9E-19 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 Gene3D G3DSA:1.10.10.10 1 52 2.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 Gene3D G3DSA:3.30.70.920 53 146 2.1E-24 T 28-03-2018 AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 7.6E-20 T 28-03-2018 AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 SUPERFAMILY SSF46785 1 81 7.91E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14675 94d10d5c410a7e9271e1db2b3fed8fbc 152 SMART SM00344 1 110 4.4E-42 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS02460 c56480b2a92d9c46c0ea30ba27d1644e 277 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS02460 c56480b2a92d9c46c0ea30ba27d1644e 277 SMART SM00382 41 231 4.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS02460 c56480b2a92d9c46c0ea30ba27d1644e 277 Gene3D G3DSA:3.40.50.300 6 242 1.2E-58 T 28-03-2018 AL504_RS02460 c56480b2a92d9c46c0ea30ba27d1644e 277 Pfam PF00005 ABC transporter 32 172 4.3E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS02460 c56480b2a92d9c46c0ea30ba27d1644e 277 SUPERFAMILY SSF52540 11 234 7.51E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16585 c0916ad5957cbe33083a03479e92497a 415 SUPERFAMILY SSF103473 12 405 2.22E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS16585 c0916ad5957cbe33083a03479e92497a 415 Pfam PF07690 Major Facilitator Superfamily 17 365 2.2E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS16585 c0916ad5957cbe33083a03479e92497a 415 Gene3D G3DSA:1.20.1250.20 208 408 8.2E-16 T 28-03-2018 AL504_RS16585 c0916ad5957cbe33083a03479e92497a 415 Gene3D G3DSA:1.20.1250.20 1 199 4.9E-20 T 28-03-2018 AL504_RS21825 0e5377abad74bd3b4e808f56667da331 98 Pfam PF03795 YCII-related domain 1 88 2.4E-19 T 28-03-2018 IPR005545 YCII-related AL504_RS21825 0e5377abad74bd3b4e808f56667da331 98 Gene3D G3DSA:3.30.70.1060 1 91 6.0E-20 T 28-03-2018 AL504_RS21825 0e5377abad74bd3b4e808f56667da331 98 SUPERFAMILY SSF54909 1 90 6.43E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS21280 7885cd7f4d8e1f4bda59d2c893b591e9 200 Pfam PF03641 Possible lysine decarboxylase 48 176 9.8E-43 T 28-03-2018 IPR031100 LOG family AL504_RS21280 7885cd7f4d8e1f4bda59d2c893b591e9 200 SUPERFAMILY SSF102405 3 176 1.98E-61 T 28-03-2018 AL504_RS21280 7885cd7f4d8e1f4bda59d2c893b591e9 200 Gene3D G3DSA:3.40.50.450 2 194 8.6E-59 T 28-03-2018 AL504_RS21280 7885cd7f4d8e1f4bda59d2c893b591e9 200 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 179 1.4E-59 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AL504_RS13090 de7bc339d294595df93997d68bbc0fc7 306 Gene3D G3DSA:3.40.50.1820 37 305 2.9E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS13090 de7bc339d294595df93997d68bbc0fc7 306 SUPERFAMILY SSF53474 36 301 3.93E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS13090 de7bc339d294595df93997d68bbc0fc7 306 Pfam PF00756 Putative esterase 53 220 1.2E-12 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Gene3D G3DSA:2.40.50.150 835 1064 3.1E-52 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Pfam PF00562 RNA polymerase Rpb2, domain 6 725 1292 2.2E-158 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Pfam PF04563 RNA polymerase beta subunit 27 506 7.8E-36 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Gene3D G3DSA:2.40.50.100 721 801 1.1E-27 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Pfam PF04565 RNA polymerase Rpb2, domain 3 519 586 1.2E-31 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Gene3D G3DSA:3.90.1800.10 1295 1362 4.9E-12 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Gene3D G3DSA:3.90.1100.10 652 719 1.3E-15 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Gene3D G3DSA:3.90.1100.10 19 253 2.7E-43 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Gene3D G3DSA:3.90.1100.10 417 651 2.1E-81 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Gene3D G3DSA:2.40.270.10 1065 1270 2.8E-78 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 SUPERFAMILY SSF64484 348 945 0.0 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 SUPERFAMILY SSF64484 1058 1368 0.0 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 SUPERFAMILY SSF64484 12 230 0.0 T 28-03-2018 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1366 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1370 12.206 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 227 8.6E-5 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Pfam PF04561 RNA polymerase Rpb2, domain 2 354 460 2.2E-16 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Pfam PF04560 RNA polymerase Rpb2, domain 7 1294 1368 7.5E-26 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS19635 179634101b0b20e7051ad105dce8beff 1370 Pfam PF10385 RNA polymerase beta subunit external 1 domain 597 662 1.2E-23 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 Gene3D G3DSA:1.10.10.10 126 210 5.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 SUPERFAMILY SSF46894 132 206 2.31E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-7 T 28-03-2018 AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 199 5.3E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 SMART SM00421 143 200 6.6E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 SUPERFAMILY SSF52172 3 175 6.19E-10 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28405 b3404fd9672007e27f3a45e96dce9173 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 SUPERFAMILY SSF52540 6 245 5.32E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 SUPERFAMILY SSF50331 239 359 5.44E-13 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 SMART SM00382 30 213 1.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 Gene3D G3DSA:2.40.50.140 265 352 6.5E-4 T 28-03-2018 AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 Pfam PF08402 TOBE domain 281 359 1.3E-9 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 Gene3D G3DSA:3.40.50.300 1 252 3.3E-77 T 28-03-2018 AL504_RS26410 0aa1dfc680dbf33e393f738ea77f96a3 361 Pfam PF00005 ABC transporter 21 163 7.4E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS02185 18a905aca7c7d83594855cfb4bfd0abc 63 Gene3D G3DSA:3.30.1190.10 25 63 1.9E-12 T 28-03-2018 AL504_RS02185 18a905aca7c7d83594855cfb4bfd0abc 63 SUPERFAMILY SSF47413 3 62 1.47E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS02185 18a905aca7c7d83594855cfb4bfd0abc 63 Pfam PF01381 Helix-turn-helix 5 57 2.3E-17 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS02185 18a905aca7c7d83594855cfb4bfd0abc 63 SMART SM00530 4 59 3.0E-18 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS02185 18a905aca7c7d83594855cfb4bfd0abc 63 Gene3D G3DSA:1.10.10.60 2 24 1.1E-7 T 28-03-2018 AL504_RS22120 ed2c280bc3245e26b1e1dcb7a85455b1 452 SUPERFAMILY SSF160935 28 450 3.14E-96 T 28-03-2018 AL504_RS22120 ed2c280bc3245e26b1e1dcb7a85455b1 452 Pfam PF06863 Protein of unknown function (DUF1254) 81 189 4.2E-29 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL504_RS22120 ed2c280bc3245e26b1e1dcb7a85455b1 452 Gene3D G3DSA:2.60.40.1610 78 207 3.9E-33 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL504_RS22120 ed2c280bc3245e26b1e1dcb7a85455b1 452 Pfam PF06742 Protein of unknown function (DUF1214) 325 434 3.1E-28 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL504_RS22120 ed2c280bc3245e26b1e1dcb7a85455b1 452 Gene3D G3DSA:2.60.120.600 281 452 1.2E-42 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL504_RS00340 a6199a7d1acb063774b46527b050eec8 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 1.6E-26 T 28-03-2018 IPR007711 Toxin HigB-1 AL504_RS00340 a6199a7d1acb063774b46527b050eec8 92 Gene3D G3DSA:3.30.2310.20 1 92 1.7E-26 T 28-03-2018 AL504_RS00340 a6199a7d1acb063774b46527b050eec8 92 SUPERFAMILY SSF143011 1 92 1.96E-15 T 28-03-2018 IPR035095 Toxin RelE-like domain AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 Gene3D G3DSA:3.30.930.10 1 205 1.1E-52 T 28-03-2018 AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 PIRSF PIRSF016262 1 210 4.1E-54 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 Hamap MF_00013 Octanoyltransferase [lipB]. 2 208 34.398 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 Pfam PF03099 Biotin/lipoate A/B protein ligase family 53 161 4.2E-7 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 22 184 9.3E-50 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 70 124 1.0E-16 T 28-03-2018 AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 SUPERFAMILY SSF55681 7 205 2.49E-57 T 28-03-2018 AL504_RS20510 64399f37cc5f14465b6c4d15848e5394 212 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 66 81 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 478 786 1.5E-55 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 Pfam PF00391 PEP-utilising enzyme, mobile domain 382 453 1.8E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 412 423 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 786 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 692 710 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 SUPERFAMILY SSF51621 464 786 5.5E-91 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 Gene3D G3DSA:3.30.470.20 191 355 7.0E-46 T 28-03-2018 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 347 3.3E-115 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 PIRSF PIRSF000854 1 787 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 SUPERFAMILY SSF52009 345 465 6.67E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 Gene3D G3DSA:3.20.20.60 478 787 1.8E-100 T 28-03-2018 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 Gene3D G3DSA:3.50.30.10 356 477 7.8E-38 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 SUPERFAMILY SSF56059 1 383 6.24E-107 T 28-03-2018 AL504_RS06090 f710895f3d2d95b969a36ebff736d16e 787 Gene3D G3DSA:3.30.1490.20 1 190 4.7E-56 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 17 170 4.8E-63 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 Gene3D G3DSA:3.30.230.10 83 173 1.5E-29 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 18 81 3.5E-24 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 ProSitePatterns PS00585 Ribosomal protein S5 signature. 35 67 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 33.741 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 Gene3D G3DSA:3.30.160.20 17 78 5.6E-22 T 28-03-2018 AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 94 164 3.1E-27 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 SUPERFAMILY SSF54768 15 82 9.42E-21 T 28-03-2018 AL504_RS19985 7296edbe7be7736b1a2ef266f5e1c82c 173 SUPERFAMILY SSF54211 86 166 1.04E-24 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS29550 c157927979cdacad2f093e6500e9f70e 122 Pfam PF07237 Protein of unknown function (DUF1428) 3 102 4.3E-35 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 AL504_RS29550 c157927979cdacad2f093e6500e9f70e 122 Gene3D G3DSA:3.30.70.100 1 118 4.6E-46 T 28-03-2018 AL504_RS29550 c157927979cdacad2f093e6500e9f70e 122 SUPERFAMILY SSF54909 3 116 1.45E-39 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS29550 c157927979cdacad2f093e6500e9f70e 122 PIRSF PIRSF007028 2 118 2.2E-46 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 AL504_RS22450 9fca6fa6f20fa6e340137d1388667bbe 148 SMART SM00257 94 145 4.7E-10 T 28-03-2018 IPR018392 LysM domain AL504_RS22450 9fca6fa6f20fa6e340137d1388667bbe 148 Pfam PF04972 BON domain 27 86 2.6E-11 T 28-03-2018 IPR007055 BON domain AL504_RS22450 9fca6fa6f20fa6e340137d1388667bbe 148 SUPERFAMILY SSF54106 93 145 8.76E-8 T 28-03-2018 IPR018392 LysM domain AL504_RS22450 9fca6fa6f20fa6e340137d1388667bbe 148 Gene3D G3DSA:3.10.350.10 88 148 4.6E-16 T 28-03-2018 AL504_RS22450 9fca6fa6f20fa6e340137d1388667bbe 148 Pfam PF01476 LysM domain 95 145 1.4E-12 T 28-03-2018 IPR018392 LysM domain AL504_RS02775 d1f1c404604d2aaea138d16917c6f352 185 Gene3D G3DSA:1.20.5.810 10 41 8.4E-10 T 28-03-2018 AL504_RS02775 d1f1c404604d2aaea138d16917c6f352 185 Pfam PF02627 Carboxymuconolactone decarboxylase family 43 119 3.1E-10 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS02775 d1f1c404604d2aaea138d16917c6f352 185 Gene3D G3DSA:1.20.1290.10 42 178 1.8E-24 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS02775 d1f1c404604d2aaea138d16917c6f352 185 SUPERFAMILY SSF69118 1 181 1.83E-46 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS08210 86437781232645e872ff51b181a15f7d 310 Gene3D G3DSA:3.40.190.10 91 176 7.2E-13 T 28-03-2018 AL504_RS08210 86437781232645e872ff51b181a15f7d 310 SUPERFAMILY SSF46785 3 86 1.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08210 86437781232645e872ff51b181a15f7d 310 Pfam PF03466 LysR substrate binding domain 92 297 1.3E-27 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS08210 86437781232645e872ff51b181a15f7d 310 Gene3D G3DSA:3.40.190.10 177 267 2.9E-17 T 28-03-2018 AL504_RS08210 86437781232645e872ff51b181a15f7d 310 SUPERFAMILY SSF53850 86 300 9.05E-30 T 28-03-2018 AL504_RS08210 86437781232645e872ff51b181a15f7d 310 Gene3D G3DSA:1.10.10.10 2 90 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08210 86437781232645e872ff51b181a15f7d 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08210 86437781232645e872ff51b181a15f7d 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08210 86437781232645e872ff51b181a15f7d 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS08210 86437781232645e872ff51b181a15f7d 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00415 38b84ded2a5688d53d0da664c39a773b 263 Gene3D G3DSA:3.20.20.70 2 263 1.5E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS00415 38b84ded2a5688d53d0da664c39a773b 263 Pfam PF00290 Tryptophan synthase alpha chain 9 242 1.1E-76 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS00415 38b84ded2a5688d53d0da664c39a773b 263 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 31.393 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS00415 38b84ded2a5688d53d0da664c39a773b 263 SUPERFAMILY SSF51366 1 251 3.01E-78 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS00415 38b84ded2a5688d53d0da664c39a773b 263 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 11 242 1.6E-60 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS00415 38b84ded2a5688d53d0da664c39a773b 263 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12870 d9844a4e04e89550864ec51bdb643ba5 496 SUPERFAMILY SSF52091 395 480 4.51E-12 T 28-03-2018 IPR002645 STAS domain AL504_RS12870 d9844a4e04e89550864ec51bdb643ba5 496 Gene3D G3DSA:3.30.750.24 388 481 8.3E-16 T 28-03-2018 IPR002645 STAS domain AL504_RS12870 d9844a4e04e89550864ec51bdb643ba5 496 Pfam PF00916 Sulfate permease family 143 343 2.9E-29 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL504_RS12870 d9844a4e04e89550864ec51bdb643ba5 496 Pfam PF01740 STAS domain 402 475 1.6E-7 T 28-03-2018 IPR002645 STAS domain AL504_RS12870 d9844a4e04e89550864ec51bdb643ba5 496 ProSitePatterns PS01130 SLC26A transporters signature. 44 65 - T 28-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 SUPERFAMILY SSF53271 65 300 6.16E-65 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 308 4.8E-119 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 Pfam PF14572 Phosphoribosyl synthetase-associated domain 199 308 2.3E-28 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 309 47.378 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 SMART SM01400 1 117 3.1E-70 T 28-03-2018 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 1.6E-46 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 Gene3D G3DSA:3.40.50.2020 154 285 5.8E-41 T 28-03-2018 AL504_RS23280 66981778fabaa34315ab5c21dac3c58e 310 Gene3D G3DSA:3.40.50.2020 1 153 9.7E-63 T 28-03-2018 AL504_RS20820 122c4e83cc3864dc5704756ed3836e2e 488 SUPERFAMILY SSF52540 43 233 2.18E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20820 122c4e83cc3864dc5704756ed3836e2e 488 SUPERFAMILY SSF52540 296 486 7.73E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20820 122c4e83cc3864dc5704756ed3836e2e 488 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 488 4.0E-198 T 28-03-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 AL504_RS20820 122c4e83cc3864dc5704756ed3836e2e 488 Gene3D G3DSA:3.40.50.300 253 488 1.3E-81 T 28-03-2018 AL504_RS20820 122c4e83cc3864dc5704756ed3836e2e 488 Gene3D G3DSA:3.40.50.300 3 252 1.5E-56 T 28-03-2018 AL504_RS20820 122c4e83cc3864dc5704756ed3836e2e 488 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 20 234 4.6E-38 T 28-03-2018 IPR022488 Polyphosphate kinase-2-related AL504_RS20820 122c4e83cc3864dc5704756ed3836e2e 488 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 264 486 5.1E-83 T 28-03-2018 IPR022488 Polyphosphate kinase-2-related AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 ProSitePatterns PS01068 OmpA-like domain. 96 140 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 Gene3D G3DSA:3.30.1330.60 39 166 5.6E-32 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 PRINTS PR01021 OMPA domain signature 64 86 2.2E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 PRINTS PR01021 OMPA domain signature 94 109 2.2E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 PRINTS PR01021 OMPA domain signature 109 125 2.2E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 SUPERFAMILY SSF103088 55 164 5.89E-32 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 Pfam PF00691 OmpA family 63 158 2.0E-21 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS15005 82bd89b830b13a1846735d48e036610e 166 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 61 164 2.9E-41 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 1.3E-46 T 28-03-2018 IPR000160 GGDEF domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 Gene3D G3DSA:3.30.450.20 97 235 6.1E-19 T 28-03-2018 AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 116 233 8.5E-11 T 28-03-2018 IPR000014 PAS domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 Pfam PF13426 PAS domain 123 225 1.2E-8 T 28-03-2018 IPR000014 PAS domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 Pfam PF00563 EAL domain 412 645 2.3E-68 T 28-03-2018 IPR001633 EAL domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 SUPERFAMILY SSF55785 124 234 2.09E-14 T 28-03-2018 IPR000014 PAS domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 SMART SM00052 405 650 1.5E-106 T 28-03-2018 IPR001633 EAL domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 SUPERFAMILY SSF141868 412 660 1.24E-85 T 28-03-2018 IPR001633 EAL domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 SUPERFAMILY SSF55073 242 397 3.06E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 394 1.1E-34 T 28-03-2018 IPR000160 GGDEF domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 Gene3D G3DSA:3.20.20.450 403 663 6.3E-95 T 28-03-2018 IPR001633 EAL domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 SMART SM00091 111 177 0.0031 T 28-03-2018 IPR000014 PAS domain AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 Gene3D G3DSA:3.30.70.270 236 402 1.8E-57 T 28-03-2018 AL504_RS07435 f56d42e58cddbf964af806628f5c38b5 665 SMART SM00267 226 395 5.8E-63 T 28-03-2018 IPR000160 GGDEF domain AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 2.8E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 SUPERFAMILY SSF64288 67 242 4.24E-35 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 Gene3D G3DSA:1.10.10.10 2 80 1.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 SMART SM00866 98 240 2.3E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 Pfam PF07702 UTRA domain 103 240 1.1E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 SUPERFAMILY SSF46785 13 88 4.92E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 SMART SM00345 19 78 3.8E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16600 8ee9fc8686b807645fc591a8822097b5 251 Gene3D G3DSA:3.40.1410.10 83 244 1.3E-28 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS26100 f031db7270f23347cbc74df2e56d200a 236 Gene3D G3DSA:3.40.50.300 1 235 3.8E-53 T 28-03-2018 AL504_RS26100 f031db7270f23347cbc74df2e56d200a 236 Pfam PF00005 ABC transporter 20 164 7.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26100 f031db7270f23347cbc74df2e56d200a 236 SMART SM00382 29 213 4.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26100 f031db7270f23347cbc74df2e56d200a 236 SUPERFAMILY SSF52540 4 233 6.66E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26100 f031db7270f23347cbc74df2e56d200a 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS11365 20a8433eebd426d3c8fab53d47aeb2b7 258 Pfam PF09339 IclR helix-turn-helix domain 6 53 3.7E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS11365 20a8433eebd426d3c8fab53d47aeb2b7 258 Pfam PF01614 Bacterial transcriptional regulator 128 237 7.5E-15 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS11365 20a8433eebd426d3c8fab53d47aeb2b7 258 SMART SM00346 3 93 1.4E-6 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS11365 20a8433eebd426d3c8fab53d47aeb2b7 258 Gene3D G3DSA:3.30.450.40 69 246 2.9E-29 T 28-03-2018 IPR029016 GAF domain-like AL504_RS11365 20a8433eebd426d3c8fab53d47aeb2b7 258 SUPERFAMILY SSF46785 3 75 1.22E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11365 20a8433eebd426d3c8fab53d47aeb2b7 258 Gene3D G3DSA:1.10.10.10 1 64 5.6E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11365 20a8433eebd426d3c8fab53d47aeb2b7 258 SUPERFAMILY SSF55781 76 241 3.73E-29 T 28-03-2018 IPR029016 GAF domain-like AL504_RS27830 5faf9286bbc25bd84b89950f565527de 301 Pfam PF01263 Aldose 1-epimerase 16 291 8.7E-31 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL504_RS27830 5faf9286bbc25bd84b89950f565527de 301 Gene3D G3DSA:2.70.98.10 12 295 5.5E-51 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL504_RS27830 5faf9286bbc25bd84b89950f565527de 301 SUPERFAMILY SSF74650 14 292 4.65E-48 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL504_RS13455 39bdcdfc7bb66892f3fa2501b1572cdf 363 ProSitePatterns PS00534 Ferrochelatase signature. 223 242 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL504_RS13455 39bdcdfc7bb66892f3fa2501b1572cdf 363 Pfam PF00762 Ferrochelatase 35 353 2.6E-109 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL504_RS13455 39bdcdfc7bb66892f3fa2501b1572cdf 363 Gene3D G3DSA:3.40.50.1400 32 206 3.4E-44 T 28-03-2018 AL504_RS13455 39bdcdfc7bb66892f3fa2501b1572cdf 363 Gene3D G3DSA:3.40.50.1400 207 334 1.8E-40 T 28-03-2018 AL504_RS13455 39bdcdfc7bb66892f3fa2501b1572cdf 363 TIGRFAM TIGR00109 hemH: ferrochelatase 34 354 3.3E-89 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL504_RS13455 39bdcdfc7bb66892f3fa2501b1572cdf 363 SUPERFAMILY SSF53800 34 359 2.88E-104 T 28-03-2018 AL504_RS13455 39bdcdfc7bb66892f3fa2501b1572cdf 363 Hamap MF_00323 Ferrochelatase [hemH]. 34 354 37.825 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 SUPERFAMILY SSF54826 1 112 1.4E-33 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 Gene3D G3DSA:3.20.20.120 113 375 9.1E-56 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 Gene3D G3DSA:3.30.390.10 1 112 1.4E-35 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 110 3.2E-31 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 SMART SM00922 128 257 3.1E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 Pfam PF13378 Enolase C-terminal domain-like 135 377 2.8E-38 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AL504_RS16370 bab9d0602a4016198ed5969531805f04 403 SUPERFAMILY SSF51604 98 386 3.28E-75 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 Pfam PF08402 TOBE domain 266 331 2.0E-11 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 SUPERFAMILY SSF50331 258 331 2.07E-8 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 Gene3D G3DSA:3.40.50.300 1 248 1.5E-71 T 28-03-2018 AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 Pfam PF00005 ABC transporter 18 160 2.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 SUPERFAMILY SSF52540 3 242 4.92E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 SMART SM00382 27 210 3.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19550 cfcb1ecc149ac2d2bc92645a2a177016 335 Gene3D G3DSA:2.40.50.140 268 326 1.6E-6 T 28-03-2018 AL504_RS12785 b26e40b8c31329f2b241884231d34816 175 SUPERFAMILY SSF88946 7 82 4.32E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12785 b26e40b8c31329f2b241884231d34816 175 Gene3D G3DSA:1.10.10.10 77 170 4.4E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12785 b26e40b8c31329f2b241884231d34816 175 SUPERFAMILY SSF88659 103 171 2.83E-9 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12785 b26e40b8c31329f2b241884231d34816 175 Gene3D G3DSA:1.10.1740.10 1 76 4.2E-16 T 28-03-2018 AL504_RS12785 b26e40b8c31329f2b241884231d34816 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 163 3.5E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12785 b26e40b8c31329f2b241884231d34816 175 Pfam PF04542 Sigma-70 region 2 15 85 1.8E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS12785 b26e40b8c31329f2b241884231d34816 175 Pfam PF08281 Sigma-70, region 4 123 169 8.4E-8 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS08285 c7133c1e6d022089c0a5e24cea52b970 305 Pfam PF02567 Phenazine biosynthesis-like protein 9 297 5.8E-52 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS08285 c7133c1e6d022089c0a5e24cea52b970 305 Gene3D G3DSA:3.10.310.10 1 136 9.6E-29 T 28-03-2018 AL504_RS08285 c7133c1e6d022089c0a5e24cea52b970 305 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 299 1.4E-56 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS08285 c7133c1e6d022089c0a5e24cea52b970 305 PIRSF PIRSF016184 1 301 4.6E-72 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS08285 c7133c1e6d022089c0a5e24cea52b970 305 SUPERFAMILY SSF54506 1 299 3.56E-60 T 28-03-2018 AL504_RS08285 c7133c1e6d022089c0a5e24cea52b970 305 Gene3D G3DSA:3.10.310.10 137 294 2.6E-29 T 28-03-2018 AL504_RS21165 eb0c557c06a974c6566e2f831939cc9d 41 Pfam PF08173 Membrane bound YbgT-like protein 1 27 5.0E-16 T 28-03-2018 IPR012994 Membrane bound YbgT-like AL504_RS21165 eb0c557c06a974c6566e2f831939cc9d 41 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 5.3E-20 T 28-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AL504_RS21130 6c4ea9dacd4836c7af57a97446249333 210 Gene3D G3DSA:2.60.450.10 50 190 0.0011 T 28-03-2018 AL504_RS21130 6c4ea9dacd4836c7af57a97446249333 210 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 12 181 2.8E-39 T 28-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AL504_RS21130 6c4ea9dacd4836c7af57a97446249333 210 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 8 181 1.6E-40 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL504_RS11485 6dfc862ae4e8bacf7c18647fe47f9dcc 137 Pfam PF06078 Bacterial protein of unknown function (DUF937) 2 110 6.9E-10 T 28-03-2018 IPR009282 Protein of unknown function DUF937 AL504_RS11485 6dfc862ae4e8bacf7c18647fe47f9dcc 137 SUPERFAMILY SSF140804 9 128 4.84E-31 T 28-03-2018 IPR027405 YidB-like AL504_RS11485 6dfc862ae4e8bacf7c18647fe47f9dcc 137 Gene3D G3DSA:1.10.10.690 1 134 2.7E-36 T 28-03-2018 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 Pfam PF01494 FAD binding domain 13 326 7.6E-26 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 Gene3D G3DSA:3.50.50.60 4 391 1.4E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 6.0E-20 T 28-03-2018 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 6.0E-20 T 28-03-2018 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 6.0E-20 T 28-03-2018 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 357 6.0E-20 T 28-03-2018 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 6.0E-20 T 28-03-2018 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 SUPERFAMILY SSF54373 186 284 1.0E-14 T 28-03-2018 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 SUPERFAMILY SSF51905 13 182 3.63E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16240 8be66caa37f8e425464fa46a6b6063f3 407 SUPERFAMILY SSF51905 279 367 3.63E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21585 be53aac3a9474fa4a18b737a48c3056e 443 Pfam PF07690 Major Facilitator Superfamily 32 300 1.3E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS21585 be53aac3a9474fa4a18b737a48c3056e 443 Gene3D G3DSA:1.20.1250.20 11 227 2.5E-25 T 28-03-2018 AL504_RS21585 be53aac3a9474fa4a18b737a48c3056e 443 Gene3D G3DSA:1.20.1250.20 249 443 6.2E-22 T 28-03-2018 AL504_RS21585 be53aac3a9474fa4a18b737a48c3056e 443 SUPERFAMILY SSF103473 20 435 9.42E-66 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS21585 be53aac3a9474fa4a18b737a48c3056e 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 321 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS21585 be53aac3a9474fa4a18b737a48c3056e 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Gene3D G3DSA:1.25.40.10 530 650 1.1E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 SMART SM00028 620 653 13.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 SMART SM00028 688 721 350.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 SMART SM00028 654 687 20.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 SUPERFAMILY SSF48452 561 721 1.01E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Pfam PF13649 Methyltransferase domain 46 143 1.5E-12 T 28-03-2018 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Gene3D G3DSA:1.25.40.10 651 757 4.4E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Pfam PF13844 Glycosyl transferase family 41 775 914 3.5E-28 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Pfam PF13844 Glycosyl transferase family 41 937 1124 4.7E-16 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Gene3D G3DSA:3.40.50.150 18 517 2.3E-19 T 28-03-2018 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 SUPERFAMILY SSF53335 22 161 1.36E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Gene3D G3DSA:3.40.50.2000 921 1107 2.8E-18 T 28-03-2018 AL504_RS06570 a08d475d59edc31e6bceb9565fc6b7ca 1132 Pfam PF10119 Predicted methyltransferase regulatory domain 226 295 4.9E-10 T 28-03-2018 IPR018773 Methyltransferase regulatory domain, predicted AL504_RS29265 b790454049ab3c3a29c37df88368e809 247 Gene3D G3DSA:3.90.550.10 1 202 2.8E-20 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS29265 b790454049ab3c3a29c37df88368e809 247 SUPERFAMILY SSF53448 2 207 6.56E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS29265 b790454049ab3c3a29c37df88368e809 247 Pfam PF00535 Glycosyl transferase family 2 4 121 3.7E-8 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS09860 cb3b8a6aa92612808daa62857806bf43 605 Gene3D G3DSA:1.20.91.10 232 316 4.1E-12 T 28-03-2018 AL504_RS09860 cb3b8a6aa92612808daa62857806bf43 605 SUPERFAMILY SSF51735 406 533 2.31E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS09860 cb3b8a6aa92612808daa62857806bf43 605 Pfam PF00999 Sodium/hydrogen exchanger family 14 377 1.4E-69 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL504_RS09860 cb3b8a6aa92612808daa62857806bf43 605 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 288 1.8E-81 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AL504_RS09860 cb3b8a6aa92612808daa62857806bf43 605 Pfam PF02254 TrkA-N domain 406 518 1.8E-19 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL504_RS09860 cb3b8a6aa92612808daa62857806bf43 605 Gene3D G3DSA:3.40.50.720 405 563 8.7E-15 T 28-03-2018 AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 SUPERFAMILY SSF53850 90 295 1.09E-30 T 28-03-2018 AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 SUPERFAMILY SSF46785 2 110 2.73E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 Gene3D G3DSA:1.10.10.10 1 86 1.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 Pfam PF03466 LysR substrate binding domain 90 291 9.6E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 Gene3D G3DSA:3.40.190.10 177 269 5.6E-9 T 28-03-2018 AL504_RS05045 18381b05e20f2188a9fbf3bb1bfc2622 301 Gene3D G3DSA:3.40.190.10 88 176 7.9E-16 T 28-03-2018 AL504_RS19935 c83e3ddef0a598592fd49bc49819c660 716 Gene3D G3DSA:3.60.21.10 42 511 1.5E-25 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS19935 c83e3ddef0a598592fd49bc49819c660 716 SUPERFAMILY SSF56300 47 58 9.25E-20 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS19935 c83e3ddef0a598592fd49bc49819c660 716 SUPERFAMILY SSF56300 295 465 9.25E-20 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS19935 c83e3ddef0a598592fd49bc49819c660 716 SUPERFAMILY SSF56300 89 172 9.25E-20 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS19935 c83e3ddef0a598592fd49bc49819c660 716 Pfam PF00149 Calcineurin-like phosphoesterase 48 418 6.5E-8 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS25705 5ccc1544751fac77752a390e54488630 137 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 10 118 1.1E-17 T 28-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AL504_RS09245 6d616e74e0b221706a3eeebdff96bff0 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.0E-31 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL504_RS09245 6d616e74e0b221706a3eeebdff96bff0 105 SUPERFAMILY SSF103481 5 104 2.09E-19 T 28-03-2018 AL504_RS30760 38df23d3490362504770a5f6c3544325 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL504_RS30760 38df23d3490362504770a5f6c3544325 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 272 1.8E-140 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AL504_RS30760 38df23d3490362504770a5f6c3544325 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 167 6.1E-4 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS30760 38df23d3490362504770a5f6c3544325 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 273 56.153 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AL504_RS30760 38df23d3490362504770a5f6c3544325 273 SUPERFAMILY SSF51161 3 257 5.27E-76 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS30760 38df23d3490362504770a5f6c3544325 273 Gene3D G3DSA:1.10.166.10 4 70 1.7E-29 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AL504_RS30760 38df23d3490362504770a5f6c3544325 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 176 210 1.1E-13 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS30760 38df23d3490362504770a5f6c3544325 273 Gene3D G3DSA:2.160.10.10 88 258 1.1E-36 T 28-03-2018 AL504_RS30760 38df23d3490362504770a5f6c3544325 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 70 7.8E-27 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AL504_RS16055 c762f99b3b15997061ed11627e511614 650 Gene3D G3DSA:3.30.450.20 152 290 5.9E-9 T 28-03-2018 AL504_RS16055 c762f99b3b15997061ed11627e511614 650 Pfam PF00672 HAMP domain 324 372 2.3E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS16055 c762f99b3b15997061ed11627e511614 650 SMART SM00331 426 649 1.9E-4 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL504_RS16055 c762f99b3b15997061ed11627e511614 650 SMART SM00304 324 376 1.6E-16 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS16055 c762f99b3b15997061ed11627e511614 650 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 453 649 2.1E-22 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL504_RS16055 c762f99b3b15997061ed11627e511614 650 Gene3D G3DSA:3.60.40.10 391 650 3.6E-22 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL504_RS16055 c762f99b3b15997061ed11627e511614 650 SUPERFAMILY SSF158472 324 373 2.62E-11 T 28-03-2018 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 SMART SM00357 52 118 5.7E-17 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 8.0E-31 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 241.599 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 SUPERFAMILY SSF52540 90 371 9.09E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09320 3b94b94e501c58053105c916179ad106 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 6.4E-16 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 SMART SM00959 5 47 4.3E-17 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 SMART SM00382 170 337 9.8E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09320 3b94b94e501c58053105c916179ad106 419 Gene3D G3DSA:3.40.50.300 129 419 1.7E-57 T 28-03-2018 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 SUPERFAMILY SSF68912 1 46 8.24E-12 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 Gene3D G3DSA:2.40.50.140 2 126 1.2E-44 T 28-03-2018 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 SUPERFAMILY SSF50249 49 125 6.28E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS09320 3b94b94e501c58053105c916179ad106 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.9E-23 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS09320 3b94b94e501c58053105c916179ad106 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 418 9.4E-208 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL504_RS06220 7dd67540e214072928593c42a2102c2d 161 Pfam PF02600 Disulfide bond formation protein DsbB 7 151 7.9E-31 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AL504_RS06220 7dd67540e214072928593c42a2102c2d 161 Gene3D G3DSA:1.20.1550.10 1 160 6.5E-28 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL504_RS06220 7dd67540e214072928593c42a2102c2d 161 SUPERFAMILY SSF158442 10 151 4.97E-27 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL504_RS15935 d4608d80a7946ea466033d1d2e351874 54 Pfam PF00301 Rubredoxin 4 49 6.5E-23 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL504_RS15935 d4608d80a7946ea466033d1d2e351874 54 PRINTS PR00163 Rubredoxin signature 3 19 3.4E-8 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL504_RS15935 d4608d80a7946ea466033d1d2e351874 54 PRINTS PR00163 Rubredoxin signature 33 49 3.4E-8 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL504_RS15935 d4608d80a7946ea466033d1d2e351874 54 SUPERFAMILY SSF57802 1 53 3.2E-23 T 28-03-2018 AL504_RS15935 d4608d80a7946ea466033d1d2e351874 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 28-03-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 AL504_RS15935 d4608d80a7946ea466033d1d2e351874 54 Gene3D G3DSA:2.20.28.10 1 53 5.5E-25 T 28-03-2018 AL504_RS15935 d4608d80a7946ea466033d1d2e351874 54 PIRSF PIRSF000071 1 54 4.1E-26 T 28-03-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 AL504_RS22840 6225c4735bfeaa7c673809625cb37f5e 501 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 472 2.0E-126 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS22840 6225c4735bfeaa7c673809625cb37f5e 501 Gene3D G3DSA:1.20.1600.10 28 478 2.8E-103 T 28-03-2018 AL504_RS22840 6225c4735bfeaa7c673809625cb37f5e 501 SUPERFAMILY SSF56954 10 474 5.89E-116 T 28-03-2018 AL504_RS22840 6225c4735bfeaa7c673809625cb37f5e 501 Pfam PF02321 Outer membrane efflux protein 290 470 6.5E-32 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS22840 6225c4735bfeaa7c673809625cb37f5e 501 Pfam PF02321 Outer membrane efflux protein 72 262 1.7E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 273 6.6E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 Gene3D G3DSA:3.40.50.720 199 299 4.0E-11 T 28-03-2018 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 Gene3D G3DSA:3.50.50.60 141 198 0.029 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.5E-18 T 28-03-2018 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 3.5E-18 T 28-03-2018 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 3.5E-18 T 28-03-2018 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 3.5E-18 T 28-03-2018 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 220 236 3.5E-18 T 28-03-2018 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 SUPERFAMILY SSF51735 146 265 2.6E-5 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.0E-15 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 150 174 1.0E-15 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.0E-15 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 Gene3D G3DSA:3.50.50.60 4 140 1.7E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 SUPERFAMILY SSF51905 223 294 2.28E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS17075 7bc28b70282c754f487075ffabe15434 300 SUPERFAMILY SSF51905 1 119 2.28E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24580 f9621270e353788b1206d0f60ff74a06 202 SUPERFAMILY SSF47616 72 200 8.63E-25 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS24580 f9621270e353788b1206d0f60ff74a06 202 Gene3D G3DSA:1.20.1050.10 91 202 1.2E-21 T 28-03-2018 AL504_RS24580 f9621270e353788b1206d0f60ff74a06 202 Pfam PF14497 Glutathione S-transferase, C-terminal domain 121 198 5.3E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS24580 f9621270e353788b1206d0f60ff74a06 202 SUPERFAMILY SSF52833 3 85 4.75E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS24580 f9621270e353788b1206d0f60ff74a06 202 Gene3D G3DSA:3.40.30.10 1 90 7.6E-21 T 28-03-2018 AL504_RS24580 f9621270e353788b1206d0f60ff74a06 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 74 7.1E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS17885 261d26514bb3dec510934e31baf72e91 329 SUPERFAMILY SSF50891 186 309 1.1E-8 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS17885 261d26514bb3dec510934e31baf72e91 329 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 8 327 3.9E-83 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS17885 261d26514bb3dec510934e31baf72e91 329 SMART SM00797 29 321 1.1E-138 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS17885 261d26514bb3dec510934e31baf72e91 329 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 30 303 7.2E-85 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.3E-39 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.3E-39 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.3E-39 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.3E-39 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.3E-39 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 PIRSF PIRSF000149 1 336 1.4E-135 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 Gene3D G3DSA:3.40.50.720 1 164 9.1E-75 T 28-03-2018 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 9.2E-39 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 Gene3D G3DSA:3.30.360.10 165 317 5.6E-63 T 28-03-2018 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 SUPERFAMILY SSF55347 155 316 9.82E-70 T 28-03-2018 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 315 1.2E-63 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 SMART SM00846 3 155 1.0E-93 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 3.2E-128 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS25770 155f2aba2a24a351c4a4076704f74641 336 SUPERFAMILY SSF51735 3 176 1.14E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS18330 adce4bc0bc46a7959b5fada406928c0a 151 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 1.5E-4 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AL504_RS18330 adce4bc0bc46a7959b5fada406928c0a 151 SUPERFAMILY SSF47598 4 42 1.17E-5 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL504_RS18330 adce4bc0bc46a7959b5fada406928c0a 151 Gene3D G3DSA:1.10.1220.10 2 80 2.3E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 SUPERFAMILY SSF56420 2 164 3.79E-64 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 PIRSF PIRSF004749 1 169 2.1E-57 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 Gene3D G3DSA:3.90.45.10 1 169 1.7E-64 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 PRINTS PR01576 Peptide deformylase signature 121 150 1.1E-36 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 PRINTS PR01576 Peptide deformylase signature 90 101 1.1E-36 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 PRINTS PR01576 Peptide deformylase signature 102 120 1.1E-36 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-36 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.333 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 161 1.7E-55 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21255 8e6773bba14ebe7335523cb37c16bbae 170 Pfam PF01327 Polypeptide deformylase 5 153 1.8E-52 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS13650 a534305301be673d74321f36877642d9 306 Gene3D G3DSA:3.20.10.10 143 295 7.2E-47 T 28-03-2018 AL504_RS13650 a534305301be673d74321f36877642d9 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 2.7E-132 T 28-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AL504_RS13650 a534305301be673d74321f36877642d9 306 SUPERFAMILY SSF56752 1 303 4.71E-99 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS13650 a534305301be673d74321f36877642d9 306 Pfam PF01063 Amino-transferase class IV 37 267 1.3E-51 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS13650 a534305301be673d74321f36877642d9 306 Gene3D G3DSA:3.30.470.10 1 142 1.3E-40 T 28-03-2018 AL504_RS20435 0ae701e61d500085cbee6750df38895b 363 Gene3D G3DSA:3.40.640.10 1 237 8.9E-55 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS20435 0ae701e61d500085cbee6750df38895b 363 Gene3D G3DSA:3.90.1150.10 238 363 7.3E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS20435 0ae701e61d500085cbee6750df38895b 363 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 359 5.2E-128 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS20435 0ae701e61d500085cbee6750df38895b 363 PIRSF PIRSF000390 1 363 1.2E-105 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS20435 0ae701e61d500085cbee6750df38895b 363 SUPERFAMILY SSF53383 9 362 1.97E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS18455 de5c4b08b1f500ab1df21bd8f1e9b5e0 308 SUPERFAMILY SSF161098 92 288 3.4E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18455 de5c4b08b1f500ab1df21bd8f1e9b5e0 308 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 67 1.8E-9 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS18455 de5c4b08b1f500ab1df21bd8f1e9b5e0 308 Gene3D G3DSA:1.10.3720.10 16 297 1.9E-40 T 28-03-2018 AL504_RS18455 de5c4b08b1f500ab1df21bd8f1e9b5e0 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 308 8.5E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03530 d19f2b7a31306970f3e9516903ca8c0b 226 SUPERFAMILY SSF52499 13 204 1.83E-43 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS03530 d19f2b7a31306970f3e9516903ca8c0b 226 Pfam PF00857 Isochorismatase family 20 172 6.5E-19 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS03530 d19f2b7a31306970f3e9516903ca8c0b 226 Gene3D G3DSA:3.40.50.850 8 215 1.5E-35 T 28-03-2018 AL504_RS16875 9a5203c2ffb0f1464bbf9315e1da6b26 279 Pfam PF13230 Glutamine amidotransferases class-II 28 201 8.0E-14 T 28-03-2018 IPR026869 Putative glutamine amidotransferase type 2 AL504_RS16875 9a5203c2ffb0f1464bbf9315e1da6b26 279 SUPERFAMILY SSF56235 2 271 2.24E-31 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS16875 9a5203c2ffb0f1464bbf9315e1da6b26 279 Gene3D G3DSA:3.60.20.10 1 271 3.9E-43 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS08170 a1ca27ff551351e57e3073be34b8e7f0 176 Pfam PF02566 OsmC-like protein 63 166 5.9E-18 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS08170 a1ca27ff551351e57e3073be34b8e7f0 176 Gene3D G3DSA:3.30.300.20 11 174 1.0E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS08170 a1ca27ff551351e57e3073be34b8e7f0 176 SUPERFAMILY SSF82784 21 169 3.36E-32 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS20290 a38c2cc2fa5838c0aabc3f8024813c9e 293 Pfam PF00483 Nucleotidyl transferase 4 240 1.0E-67 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL504_RS20290 a38c2cc2fa5838c0aabc3f8024813c9e 293 Gene3D G3DSA:3.90.550.10 4 292 4.2E-72 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20290 a38c2cc2fa5838c0aabc3f8024813c9e 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 289 1.3E-155 T 28-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL504_RS20290 a38c2cc2fa5838c0aabc3f8024813c9e 293 SUPERFAMILY SSF53448 1 289 1.51E-92 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS19925 eacebc3ad95e4dba7d58d545d683996e 298 Pfam PF00561 alpha/beta hydrolase fold 36 271 1.3E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS19925 eacebc3ad95e4dba7d58d545d683996e 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 9.0E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS19925 eacebc3ad95e4dba7d58d545d683996e 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 9.0E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS19925 eacebc3ad95e4dba7d58d545d683996e 298 Gene3D G3DSA:3.40.50.1820 14 288 4.0E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS19925 eacebc3ad95e4dba7d58d545d683996e 298 SUPERFAMILY SSF53474 12 278 6.6E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS20985 234d6a109ee857ca84f1546ff2996e5c 102 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 102 22.992 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AL504_RS20985 234d6a109ee857ca84f1546ff2996e5c 102 SUPERFAMILY SSF141000 3 100 4.58E-24 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AL504_RS20985 234d6a109ee857ca84f1546ff2996e5c 102 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 97 6.0E-20 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AL504_RS20985 234d6a109ee857ca84f1546ff2996e5c 102 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 102 2.1E-25 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AL504_RS09340 9269aeaf37e0b1683f7ab060de8ebbf4 224 Gene3D G3DSA:3.40.50.620 42 199 1.1E-4 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS09340 9269aeaf37e0b1683f7ab060de8ebbf4 224 Pfam PF02677 Uncharacterized BCR, COG1636 18 192 1.3E-64 T 28-03-2018 IPR003828 Probable epoxyqueuosine reductase QueH AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 SUPERFAMILY SSF46785 4 110 3.81E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 Gene3D G3DSA:1.10.10.10 1 88 1.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 Pfam PF03466 LysR substrate binding domain 90 267 1.8E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 SUPERFAMILY SSF53850 84 281 7.76E-22 T 28-03-2018 AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 Gene3D G3DSA:3.40.190.10 89 220 1.2E-14 T 28-03-2018 AL504_RS11045 a55b1854acfd2dbf97714afb83d77bca 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 8.2E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 8.2E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 8.2E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 8.2E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 8.2E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 SUPERFAMILY SSF52540 4 207 1.93E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Pfam PF03144 Elongation factor Tu domain 2 219 290 2.3E-9 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Gene3D G3DSA:3.30.70.870 303 401 4.6E-32 T 28-03-2018 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 600 5.4E-286 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Gene3D G3DSA:2.40.30.10 191 301 9.6E-19 T 28-03-2018 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Gene3D G3DSA:2.40.50.250 484 574 4.1E-40 T 28-03-2018 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 134 1.6E-23 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 SUPERFAMILY SSF54980 303 388 2.66E-13 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Gene3D G3DSA:3.40.50.300 68 190 1.2E-28 T 28-03-2018 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Gene3D G3DSA:3.40.50.300 2 67 2.2E-10 T 28-03-2018 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 SUPERFAMILY SSF54980 399 514 5.28E-28 T 28-03-2018 IPR035647 EF-G domain III/V-like AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 SUPERFAMILY SSF50447 151 300 7.07E-29 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Gene3D G3DSA:3.30.70.240 402 482 8.1E-19 T 28-03-2018 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 4.7E-54 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 Pfam PF00679 Elongation factor G C-terminus 397 478 4.2E-22 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL504_RS11055 9512b3b5ca1540c28588d60bd90f3e38 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS19225 d59318136b4e1ebf51082047bf87a1d1 264 Gene3D G3DSA:1.10.3720.10 6 256 1.3E-41 T 28-03-2018 AL504_RS19225 d59318136b4e1ebf51082047bf87a1d1 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 252 4.4E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19225 d59318136b4e1ebf51082047bf87a1d1 264 SUPERFAMILY SSF161098 7 253 1.19E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13080 4576fa8342daeb2922621679ffcc56ad 313 Gene3D G3DSA:3.40.190.10 96 186 3.3E-9 T 28-03-2018 AL504_RS13080 4576fa8342daeb2922621679ffcc56ad 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 7.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS13080 4576fa8342daeb2922621679ffcc56ad 313 SUPERFAMILY SSF46785 8 88 1.84E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13080 4576fa8342daeb2922621679ffcc56ad 313 Pfam PF03466 LysR substrate binding domain 100 300 4.5E-20 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS13080 4576fa8342daeb2922621679ffcc56ad 313 SUPERFAMILY SSF53850 100 299 2.9E-30 T 28-03-2018 AL504_RS13080 4576fa8342daeb2922621679ffcc56ad 313 Gene3D G3DSA:1.10.10.10 5 90 2.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13080 4576fa8342daeb2922621679ffcc56ad 313 Gene3D G3DSA:3.40.190.10 187 273 1.6E-13 T 28-03-2018 AL504_RS17985 71132653b2390571566d08def9938b08 224 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 9 197 9.5E-60 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL504_RS17985 71132653b2390571566d08def9938b08 224 Pfam PF01634 ATP phosphoribosyltransferase 58 214 8.3E-49 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL504_RS17985 71132653b2390571566d08def9938b08 224 Gene3D G3DSA:3.40.190.10 6 129 3.7E-39 T 28-03-2018 AL504_RS17985 71132653b2390571566d08def9938b08 224 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AL504_RS17985 71132653b2390571566d08def9938b08 224 SUPERFAMILY SSF53850 8 218 2.06E-65 T 28-03-2018 AL504_RS17985 71132653b2390571566d08def9938b08 224 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 8 221 55.058 T 28-03-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AL504_RS17985 71132653b2390571566d08def9938b08 224 Gene3D G3DSA:3.40.190.10 130 222 2.4E-21 T 28-03-2018 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 SUPERFAMILY SSF48613 423 637 1.02E-27 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 Gene3D G3DSA:1.20.910.10 414 643 8.2E-33 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 SUPERFAMILY SSF53901 253 370 2.11E-16 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 Gene3D G3DSA:3.40.47.10 4 190 2.0E-23 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 Pfam PF14518 Iron-containing redox enzyme 519 630 4.6E-10 T 28-03-2018 IPR028201 PqqC-like protein AL504_RS20225 3811ea52db3de50e08681993e819a147 643 SUPERFAMILY SSF53901 6 201 3.33E-28 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 128 199 2.1E-4 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 Gene3D G3DSA:3.40.47.10 191 375 3.2E-18 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS20225 3811ea52db3de50e08681993e819a147 643 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 285 357 5.8E-9 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL504_RS12370 3cb33803d452844f22796c063a861ab3 387 Gene3D G3DSA:3.40.50.2300 155 282 2.1E-27 T 28-03-2018 AL504_RS12370 3cb33803d452844f22796c063a861ab3 387 Gene3D G3DSA:3.40.50.2300 283 367 2.3E-6 T 28-03-2018 AL504_RS12370 3cb33803d452844f22796c063a861ab3 387 Gene3D G3DSA:3.40.50.2300 9 154 6.4E-18 T 28-03-2018 AL504_RS12370 3cb33803d452844f22796c063a861ab3 387 SUPERFAMILY SSF53822 26 383 1.3E-74 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS12370 3cb33803d452844f22796c063a861ab3 387 Pfam PF13458 Periplasmic binding protein 25 379 6.0E-49 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS21665 9e53598283c8f4898977d7e3b407d274 265 PIRSF PIRSF002854 2 265 5.9E-95 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS21665 9e53598283c8f4898977d7e3b407d274 265 Pfam PF03180 NLPA lipoprotein 29 265 7.5E-88 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS21665 9e53598283c8f4898977d7e3b407d274 265 SUPERFAMILY SSF53850 28 265 7.17E-81 T 28-03-2018 AL504_RS21665 9e53598283c8f4898977d7e3b407d274 265 Gene3D G3DSA:3.40.190.10 25 122 3.8E-19 T 28-03-2018 AL504_RS21665 9e53598283c8f4898977d7e3b407d274 265 Gene3D G3DSA:3.40.190.10 123 265 6.8E-52 T 28-03-2018 AL504_RS21665 9e53598283c8f4898977d7e3b407d274 265 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 26 265 5.9E-76 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 SUPERFAMILY SSF56420 1 165 2.36E-58 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 PIRSF PIRSF004749 1 168 6.0E-48 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 PRINTS PR01576 Peptide deformylase signature 109 127 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 PRINTS PR01576 Peptide deformylase signature 97 108 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 PRINTS PR01576 Peptide deformylase signature 128 157 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 PRINTS PR01576 Peptide deformylase signature 33 62 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 Gene3D G3DSA:3.90.45.10 1 167 3.1E-54 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.1E-36 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 Pfam PF01327 Polypeptide deformylase 3 158 1.2E-48 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS14380 87953019b59fdd02e358a69b7461d507 177 Hamap MF_00163 Peptide deformylase [def]. 1 166 26.911 T 28-03-2018 IPR023635 Peptide deformylase AL504_RS21475 e35612f6e6eaba8da0b1e77a8c48315d 334 Gene3D G3DSA:3.30.1780.10 4 143 4.8E-36 T 28-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL504_RS21475 e35612f6e6eaba8da0b1e77a8c48315d 334 SUPERFAMILY SSF51735 3 333 2.19E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21475 e35612f6e6eaba8da0b1e77a8c48315d 334 Gene3D G3DSA:3.40.50.720 144 306 2.9E-19 T 28-03-2018 AL504_RS21475 e35612f6e6eaba8da0b1e77a8c48315d 334 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 14 323 2.3E-58 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS21475 e35612f6e6eaba8da0b1e77a8c48315d 334 PIRSF PIRSF001439 2 334 2.9E-85 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS24940 a230416d7ece204854cb14017102a865 466 Pfam PF01554 MatE 262 410 3.7E-21 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS24940 a230416d7ece204854cb14017102a865 466 Pfam PF01554 MatE 32 191 1.6E-19 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS24940 a230416d7ece204854cb14017102a865 466 PIRSF PIRSF006603 10 461 6.4E-70 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS24940 a230416d7ece204854cb14017102a865 466 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 410 8.2E-48 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 SMART SM00357 4 68 7.8E-32 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 6.9E-31 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 PRINTS PR00050 Cold shock protein signature 41 59 2.6E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 PRINTS PR00050 Cold shock protein signature 5 20 2.6E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 PRINTS PR00050 Cold shock protein signature 26 35 2.6E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 28-03-2018 IPR019844 Cold-shock conserved site AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 SUPERFAMILY SSF50249 3 67 4.5E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 PIRSF PIRSF002599 1 68 6.0E-27 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL504_RS19480 c71c025a07cc3184c414d4caff2e4d4e 68 Gene3D G3DSA:2.40.50.140 1 68 7.8E-29 T 28-03-2018 AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 Pfam PF01546 Peptidase family M20/M25/M40 74 356 5.3E-37 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 SUPERFAMILY SSF55031 184 297 3.66E-32 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 383 1.2E-112 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 SUPERFAMILY SSF53187 299 396 1.63E-88 T 28-03-2018 AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 SUPERFAMILY SSF53187 3 198 1.63E-88 T 28-03-2018 AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 PIRSF PIRSF005962 2 398 5.9E-134 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 Pfam PF07687 Peptidase dimerisation domain 186 282 4.9E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 Gene3D G3DSA:3.40.630.10 246 398 1.6E-23 T 28-03-2018 AL504_RS14640 91a149edb72aa92ffc616c1f5389ca98 398 Gene3D G3DSA:3.40.630.10 1 228 2.9E-53 T 28-03-2018 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 180 408 1.7E-79 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 5 409 3.0E-169 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 Gene3D G3DSA:3.90.1170.30 1 46 1.9E-13 T 28-03-2018 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 Pfam PF00364 Biotin-requiring enzyme 5 77 4.8E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 SUPERFAMILY SSF47005 114 153 1.44E-9 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 SUPERFAMILY SSF51230 2 97 3.27E-26 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 Gene3D G3DSA:4.10.320.10 117 166 2.2E-14 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 Pfam PF02817 e3 binding domain 118 151 8.2E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 Gene3D G3DSA:3.30.559.10 167 408 1.9E-88 T 28-03-2018 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 SUPERFAMILY SSF52777 180 409 2.45E-87 T 28-03-2018 AL504_RS11685 9a912948661e79722467bb2e1a37bd4f 410 Gene3D G3DSA:2.40.50.100 47 116 2.9E-6 T 28-03-2018 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 28-03-2018 IPR025505 FHIPEP conserved site AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 PIRSF PIRSF005419 1 697 1.5E-258 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 1.0E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 1.0E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 1.0E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 1.0E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 1.0E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 1.0E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 Pfam PF00771 FHIPEP family 26 687 3.4E-237 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS15440 5b4a8537d4c33d7fedc002f70c6e8a6c 697 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 695 4.1E-288 T 28-03-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 AL504_RS26060 8664c88fc2b7c1816adb4eea902a1f39 338 Gene3D G3DSA:3.40.190.10 139 249 2.9E-9 T 28-03-2018 AL504_RS26060 8664c88fc2b7c1816adb4eea902a1f39 338 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 334 1.9E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS26060 8664c88fc2b7c1816adb4eea902a1f39 338 PIRSF PIRSF017082 11 337 2.3E-72 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS26060 8664c88fc2b7c1816adb4eea902a1f39 338 SUPERFAMILY SSF53850 130 298 2.71E-10 T 28-03-2018 AL504_RS22475 d98f8ee415c849dded70c7622af5a92d 303 Gene3D G3DSA:3.40.190.10 85 184 9.8E-26 T 28-03-2018 AL504_RS22475 d98f8ee415c849dded70c7622af5a92d 303 Gene3D G3DSA:1.10.10.10 1 84 6.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22475 d98f8ee415c849dded70c7622af5a92d 303 Pfam PF03466 LysR substrate binding domain 92 297 4.5E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22475 d98f8ee415c849dded70c7622af5a92d 303 Gene3D G3DSA:3.40.190.10 185 268 4.5E-18 T 28-03-2018 AL504_RS22475 d98f8ee415c849dded70c7622af5a92d 303 SUPERFAMILY SSF53850 93 299 3.04E-40 T 28-03-2018 AL504_RS22475 d98f8ee415c849dded70c7622af5a92d 303 SUPERFAMILY SSF46785 5 116 2.56E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22475 d98f8ee415c849dded70c7622af5a92d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 7.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16230 d6ef92e7744e7daebb33334427beb167 334 SUPERFAMILY SSF53850 128 297 2.08E-13 T 28-03-2018 AL504_RS16230 d6ef92e7744e7daebb33334427beb167 334 Gene3D G3DSA:3.40.190.10 135 243 7.7E-13 T 28-03-2018 AL504_RS16230 d6ef92e7744e7daebb33334427beb167 334 PIRSF PIRSF017082 1 334 2.6E-71 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16230 d6ef92e7744e7daebb33334427beb167 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 331 4.3E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS17235 f4309e33d4b435dc969fb294b5d56e3d 196 Pfam PF00384 Molybdopterin oxidoreductase 108 140 3.1E-5 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS17235 f4309e33d4b435dc969fb294b5d56e3d 196 Gene3D G3DSA:2.20.25.90 37 109 5.3E-22 T 28-03-2018 AL504_RS17235 f4309e33d4b435dc969fb294b5d56e3d 196 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 104 6.8E-19 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS17235 f4309e33d4b435dc969fb294b5d56e3d 196 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 49 67 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL504_RS17235 f4309e33d4b435dc969fb294b5d56e3d 196 Gene3D G3DSA:3.40.50.740 110 196 4.4E-11 T 28-03-2018 AL504_RS17235 f4309e33d4b435dc969fb294b5d56e3d 196 SMART SM00926 44 105 9.4E-23 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS17235 f4309e33d4b435dc969fb294b5d56e3d 196 SUPERFAMILY SSF53706 37 196 1.96E-52 T 28-03-2018 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 Gene3D G3DSA:1.20.140.10 297 453 3.6E-22 T 28-03-2018 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 Gene3D G3DSA:2.40.110.10 179 296 1.2E-18 T 28-03-2018 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 SUPERFAMILY SSF56645 68 298 5.63E-48 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 SUPERFAMILY SSF47203 303 450 6.12E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 180 271 8.6E-11 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 303 450 5.5E-13 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 82 175 4.3E-14 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 Gene3D G3DSA:1.10.540.10 17 178 9.8E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS14385 baf5837f67109ae1d641481d95119a89 758 Pfam PF09317 Domain of unknown function (DUF1974) 457 734 1.0E-84 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AL504_RS09330 4ab6bfe39bf8a4c8ef988dc5b36fe296 1206 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 309 1186 1.8E-226 T 28-03-2018 IPR011836 Conserved hypothetical protein CHP02099 AL504_RS09330 4ab6bfe39bf8a4c8ef988dc5b36fe296 1206 Pfam PF13502 AsmA-like C-terminal region 944 1179 3.9E-50 T 28-03-2018 IPR032712 AsmA-like, C-terminal AL504_RS09330 4ab6bfe39bf8a4c8ef988dc5b36fe296 1206 Pfam PF13116 Protein of unknown function 410 691 1.9E-39 T 28-03-2018 IPR025263 Domain of unknown function DUF3971 AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 SUPERFAMILY SSF53901 1 251 1.96E-60 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 Gene3D G3DSA:3.40.47.10 4 259 2.2E-57 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 363 3.5E-29 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 3.2E-46 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 Gene3D G3DSA:3.40.47.10 260 406 8.9E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 SUPERFAMILY SSF53901 215 406 4.72E-61 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08050 5b203b3f16ee57f23f2e4f01836976e7 407 SMART SM00825 Beta-ketoacyl synthase 4 349 7.3E-10 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL504_RS23655 b5072845ba428e320762f1ded162e084 450 Gene3D G3DSA:3.30.565.10 300 450 1.4E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23655 b5072845ba428e320762f1ded162e084 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 295 2.3E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23655 b5072845ba428e320762f1ded162e084 450 SUPERFAMILY SSF47384 223 296 5.1E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23655 b5072845ba428e320762f1ded162e084 450 Gene3D G3DSA:1.10.287.130 220 296 6.4E-12 T 28-03-2018 AL504_RS23655 b5072845ba428e320762f1ded162e084 450 SMART SM00387 343 449 1.9E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23655 b5072845ba428e320762f1ded162e084 450 SMART SM00388 232 300 1.6E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS23655 b5072845ba428e320762f1ded162e084 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 446 3.7E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23655 b5072845ba428e320762f1ded162e084 450 SUPERFAMILY SSF55874 304 446 2.88E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS23655 b5072845ba428e320762f1ded162e084 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 4.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23655 b5072845ba428e320762f1ded162e084 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 4.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23655 b5072845ba428e320762f1ded162e084 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 4.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS23655 b5072845ba428e320762f1ded162e084 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 4.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10165 c70ea2310cc435ad0e32826dd220c84e 414 Gene3D G3DSA:3.90.1150.10 292 413 7.7E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS10165 c70ea2310cc435ad0e32826dd220c84e 414 Gene3D G3DSA:3.40.640.10 1 291 3.9E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS10165 c70ea2310cc435ad0e32826dd220c84e 414 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 408 2.3E-103 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS10165 c70ea2310cc435ad0e32826dd220c84e 414 PIRSF PIRSF001434 1 411 6.9E-117 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS10165 c70ea2310cc435ad0e32826dd220c84e 414 SUPERFAMILY SSF53383 5 409 2.1E-85 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS17105 9ce1969f7402555b0cfe3f355aac5f8c 433 SMART SM00925 167 326 6.0E-91 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL504_RS17105 9ce1969f7402555b0cfe3f355aac5f8c 433 Pfam PF03562 MltA specific insert domain 75 326 5.2E-80 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL504_RS17105 9ce1969f7402555b0cfe3f355aac5f8c 433 Pfam PF06725 3D domain 349 422 3.7E-23 T 28-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AL504_RS17105 9ce1969f7402555b0cfe3f355aac5f8c 433 PIRSF PIRSF019422 1 432 1.0E-124 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AL504_RS17105 9ce1969f7402555b0cfe3f355aac5f8c 433 SUPERFAMILY SSF50685 54 426 3.14E-121 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL504_RS17105 9ce1969f7402555b0cfe3f355aac5f8c 433 Gene3D G3DSA:2.40.40.10 285 432 4.0E-34 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL504_RS17105 9ce1969f7402555b0cfe3f355aac5f8c 433 Gene3D G3DSA:2.40.40.10 48 284 5.2E-33 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 SUPERFAMILY SSF50715 374 584 1.99E-64 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 SUPERFAMILY SSF52374 53 379 2.55E-95 T 28-03-2018 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Gene3D G3DSA:1.10.1160.10 295 372 1.6E-31 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Gene3D G3DSA:2.40.240.10 378 499 1.5E-44 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 585 51.686 T 28-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 53 371 1.3E-100 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Gene3D G3DSA:3.40.50.620 184 294 4.4E-17 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Gene3D G3DSA:3.40.50.620 53 181 3.9E-37 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Gene3D G3DSA:2.40.240.10 500 583 3.4E-26 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 53 585 9.9E-203 T 28-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 70 81 8.2E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 239 249 8.2E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 85 98 8.2E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 56 68 8.2E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS13790 6bb19020b4483fa4e4f27ca488daab63 588 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 374 564 5.3E-49 T 28-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 Gene3D G3DSA:3.40.250.10 162 304 3.6E-30 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 SUPERFAMILY SSF52821 172 298 3.01E-33 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 ProSitePatterns PS00380 Rhodanese signature 1. 57 68 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 SMART SM00450 169 295 4.7E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 SMART SM00450 31 145 1.7E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 Pfam PF00581 Rhodanese-like domain 32 141 2.2E-16 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 Pfam PF00581 Rhodanese-like domain 180 290 8.2E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 SUPERFAMILY SSF52821 26 150 4.32E-33 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 ProSitePatterns PS00683 Rhodanese C-terminal signature. 279 289 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL504_RS03020 9b2816059fe4377d8f7bdcc64c136081 308 Gene3D G3DSA:3.40.250.10 22 161 1.2E-28 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS11425 da867a0a121e95d3b36c5755fe05193d 300 Gene3D G3DSA:1.10.3660.10 197 300 3.6E-25 T 28-03-2018 AL504_RS11425 da867a0a121e95d3b36c5755fe05193d 300 SUPERFAMILY SSF51735 20 185 6.59E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS11425 da867a0a121e95d3b36c5755fe05193d 300 SUPERFAMILY SSF48179 189 297 3.74E-31 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS11425 da867a0a121e95d3b36c5755fe05193d 300 Pfam PF02153 Prephenate dehydrogenase 32 287 2.4E-67 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AL504_RS11425 da867a0a121e95d3b36c5755fe05193d 300 Gene3D G3DSA:3.40.50.720 20 187 1.2E-29 T 28-03-2018 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 Gene3D G3DSA:3.40.50.10600 8 131 1.7E-27 T 28-03-2018 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 SMART SM00091 8 74 2.5E-4 T 28-03-2018 IPR000014 PAS domain AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 SMART SM00283 280 527 2.7E-83 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 SMART SM00304 226 279 6.0E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 SUPERFAMILY SSF58104 254 528 9.02E-68 T 28-03-2018 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.1E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.1E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 455 484 1.1E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 1.1E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 114 9.0E-16 T 28-03-2018 IPR000014 PAS domain AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 Gene3D G3DSA:1.10.287.950 335 531 5.8E-45 T 28-03-2018 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 Gene3D G3DSA:1.10.287.950 199 334 1.3E-12 T 28-03-2018 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 SMART SM00086 80 121 0.0028 T 28-03-2018 IPR001610 PAC motif AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 SUPERFAMILY SSF55785 20 114 2.44E-27 T 28-03-2018 IPR000014 PAS domain AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 493 5.3E-50 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS02375 348451eaffa784722706fbd9d5fae349 563 Pfam PF08447 PAS fold 30 114 1.5E-15 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 Pfam PF00455 DeoR C terminal sensor domain 82 239 1.3E-53 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 Gene3D G3DSA:3.40.50.1360 77 244 2.7E-39 T 28-03-2018 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 ProSitePatterns PS00894 DeoR-type HTH domain signature. 13 47 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 SMART SM00420 13 65 1.0E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 SUPERFAMILY SSF100950 84 241 1.31E-26 T 28-03-2018 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 SMART SM01134 80 241 2.3E-73 T 28-03-2018 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 SUPERFAMILY SSF46785 10 66 5.55E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 Gene3D G3DSA:1.10.10.10 8 76 5.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 31 45 1.5E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 45 63 1.5E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS05470 6bc636c35b8c232c4c60a0956f2d1a84 270 Pfam PF08220 DeoR-like helix-turn-helix domain 13 68 8.4E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS09430 bdd474804d0b556953161af8817b2d08 535 Gene3D G3DSA:3.40.50.300 8 370 4.1E-25 T 28-03-2018 AL504_RS09430 bdd474804d0b556953161af8817b2d08 535 SUPERFAMILY SSF52540 28 406 3.15E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09430 bdd474804d0b556953161af8817b2d08 535 Pfam PF05872 Bacterial protein of unknown function (DUF853) 33 532 1.4E-231 T 28-03-2018 IPR033186 Helicase HerA-like C-terminal AL504_RS27120 848c4c83ba24435c69f21f4f4ba0f61c 495 Gene3D G3DSA:1.20.1600.10 22 493 1.3E-109 T 28-03-2018 AL504_RS27120 848c4c83ba24435c69f21f4f4ba0f61c 495 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 487 5.8E-124 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS27120 848c4c83ba24435c69f21f4f4ba0f61c 495 PIRSF PIRSF001892 4 492 3.9E-59 T 28-03-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 AL504_RS27120 848c4c83ba24435c69f21f4f4ba0f61c 495 Pfam PF02321 Outer membrane efflux protein 86 276 1.9E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS27120 848c4c83ba24435c69f21f4f4ba0f61c 495 Pfam PF02321 Outer membrane efflux protein 305 485 3.1E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS27120 848c4c83ba24435c69f21f4f4ba0f61c 495 SUPERFAMILY SSF56954 77 490 9.42E-117 T 28-03-2018 AL504_RS27120 848c4c83ba24435c69f21f4f4ba0f61c 495 SUPERFAMILY SSF56954 3 34 9.42E-117 T 28-03-2018 AL504_RS09370 f27144941b36f753978178ef7c2d699a 396 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 50 366 4.3E-45 T 28-03-2018 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 AL504_RS09370 f27144941b36f753978178ef7c2d699a 396 SUPERFAMILY SSF50969 23 369 1.26E-73 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL504_RS09370 f27144941b36f753978178ef7c2d699a 396 Gene3D G3DSA:2.130.10.10 300 393 2.3E-4 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS09370 f27144941b36f753978178ef7c2d699a 396 Gene3D G3DSA:2.130.10.10 41 299 3.7E-41 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS18025 1d92b7908a0be06eadfe0e704794781d 116 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 12 98 3.5E-27 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL504_RS18025 1d92b7908a0be06eadfe0e704794781d 116 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 101 2.5E-14 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL504_RS18025 1d92b7908a0be06eadfe0e704794781d 116 Gene3D G3DSA:1.10.287.1080 8 103 6.9E-22 T 28-03-2018 AL504_RS18025 1d92b7908a0be06eadfe0e704794781d 116 SUPERFAMILY SSF101386 13 102 2.99E-22 T 28-03-2018 AL504_RS18025 1d92b7908a0be06eadfe0e704794781d 116 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 9 98 20.658 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 77 181 1.6E-28 T 28-03-2018 IPR013856 Peptidase M4 domain GO:0004222 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 Gene3D G3DSA:1.10.390.10 187 353 4.3E-53 T 28-03-2018 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 Gene3D G3DSA:3.10.170.10 5 186 4.0E-57 T 28-03-2018 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 185 352 3.1E-47 T 28-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 173 189 8.5E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 194 205 8.5E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 275 291 8.5E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 137 157 8.5E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL504_RS24730 10551623d0a1efce156188ade38a456a 354 SUPERFAMILY SSF55486 74 352 3.66E-78 T 28-03-2018 AL504_RS05945 ae3033a9e34748f48997f15a8ba85d1a 403 Pfam PF07690 Major Facilitator Superfamily 28 364 8.5E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS05945 ae3033a9e34748f48997f15a8ba85d1a 403 Gene3D G3DSA:1.20.1250.20 204 399 7.5E-10 T 28-03-2018 AL504_RS05945 ae3033a9e34748f48997f15a8ba85d1a 403 Gene3D G3DSA:1.20.1250.20 5 195 1.4E-13 T 28-03-2018 AL504_RS05945 ae3033a9e34748f48997f15a8ba85d1a 403 SUPERFAMILY SSF103473 13 401 3.27E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS18355 599d93c7850d31c502b073883399ebf8 245 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 7 242 8.9E-67 T 28-03-2018 IPR014147 Type IV conjugative transfer protein TrbJ AL504_RS18355 599d93c7850d31c502b073883399ebf8 245 Gene3D G3DSA:1.20.58.430 27 220 2.6E-33 T 28-03-2018 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 SUPERFAMILY SSF55031 188 303 2.49E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 PIRSF PIRSF005962 2 395 8.8E-126 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 Gene3D G3DSA:3.40.630.10 254 393 9.0E-21 T 28-03-2018 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 Gene3D G3DSA:3.40.630.10 2 242 2.9E-46 T 28-03-2018 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 381 2.4E-113 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 SUPERFAMILY SSF53187 305 391 2.48E-86 T 28-03-2018 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 SUPERFAMILY SSF53187 7 202 2.48E-86 T 28-03-2018 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 Pfam PF01546 Peptidase family M20/M25/M40 78 390 3.4E-35 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS14815 1461fd871d1a83d34f02e2fcfd77797a 397 Pfam PF07687 Peptidase dimerisation domain 191 287 4.6E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS13800 27bd6850e846673a56d590cb66db890d 412 SUPERFAMILY SSF89796 14 408 6.67E-117 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS13800 27bd6850e846673a56d590cb66db890d 412 Pfam PF02515 CoA-transferase family III 17 384 5.0E-109 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS13800 27bd6850e846673a56d590cb66db890d 412 Gene3D G3DSA:3.40.50.10540 11 412 2.8E-120 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS27425 0b328aca3c3a390bb86fb6298339ea27 141 Gene3D G3DSA:2.20.25.10 1 45 1.1E-14 T 28-03-2018 AL504_RS27425 0b328aca3c3a390bb86fb6298339ea27 141 SUPERFAMILY SSF82784 7 139 1.57E-36 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS27425 0b328aca3c3a390bb86fb6298339ea27 141 Gene3D G3DSA:3.30.300.20 46 140 4.0E-21 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS27425 0b328aca3c3a390bb86fb6298339ea27 141 Pfam PF02566 OsmC-like protein 41 138 5.1E-15 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS27425 0b328aca3c3a390bb86fb6298339ea27 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 9 139 1.5E-44 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AL504_RS20590 a95ebf9a5762e724d1a4dcd0cc8f9455 324 Gene3D G3DSA:1.10.443.10 121 314 2.4E-43 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS20590 a95ebf9a5762e724d1a4dcd0cc8f9455 324 Gene3D G3DSA:1.10.150.130 5 120 4.2E-23 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS20590 a95ebf9a5762e724d1a4dcd0cc8f9455 324 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 16 321 5.0E-106 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AL504_RS20590 a95ebf9a5762e724d1a4dcd0cc8f9455 324 Pfam PF00589 Phage integrase family 119 306 7.0E-38 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS20590 a95ebf9a5762e724d1a4dcd0cc8f9455 324 SUPERFAMILY SSF56349 14 315 7.95E-52 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS20590 a95ebf9a5762e724d1a4dcd0cc8f9455 324 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 320 56.787 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AL504_RS20590 a95ebf9a5762e724d1a4dcd0cc8f9455 324 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 91 6.7E-17 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL504_RS18270 fa4d12e49aadc8eee8c29e458fdf8ff3 352 Pfam PF02515 CoA-transferase family III 12 345 2.7E-81 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS18270 fa4d12e49aadc8eee8c29e458fdf8ff3 352 SUPERFAMILY SSF89796 8 346 7.72E-95 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS18270 fa4d12e49aadc8eee8c29e458fdf8ff3 352 Gene3D G3DSA:3.40.50.10540 7 351 2.5E-92 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS26940 b15b40a17ff54edc43c615e67a2d3e98 124 Gene3D G3DSA:3.30.429.10 66 123 1.3E-10 T 28-03-2018 AL504_RS26940 b15b40a17ff54edc43c615e67a2d3e98 124 Gene3D G3DSA:3.30.429.10 1 65 8.5E-15 T 28-03-2018 AL504_RS26940 b15b40a17ff54edc43c615e67a2d3e98 124 SUPERFAMILY SSF55331 2 118 3.75E-24 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL504_RS26940 b15b40a17ff54edc43c615e67a2d3e98 124 Pfam PF01361 Tautomerase enzyme 2 56 8.5E-12 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AL504_RS26940 b15b40a17ff54edc43c615e67a2d3e98 124 Pfam PF01361 Tautomerase enzyme 68 114 1.0E-7 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 SUPERFAMILY SSF56024 111 316 1.1E-50 T 28-03-2018 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 Pfam PF13091 PLD-like domain 328 448 4.1E-24 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 Pfam PF13091 PLD-like domain 137 280 2.8E-16 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 SMART SM00155 220 247 11.0 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 SMART SM00155 398 425 6.6E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 Gene3D G3DSA:3.30.870.10 314 471 7.7E-28 T 28-03-2018 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 Gene3D G3DSA:3.30.870.10 111 303 1.2E-33 T 28-03-2018 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 SUPERFAMILY SSF56024 272 470 2.24E-45 T 28-03-2018 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 PIRSF PIRSF000850 316 375 0.78 T 28-03-2018 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 PIRSF PIRSF000850 370 460 2.1E-4 T 28-03-2018 AL504_RS27525 d480457bc813cdc2579ad799fe5f7cc2 485 PIRSF PIRSF000850 120 190 0.079 T 28-03-2018 AL504_RS25690 ae935f057530972ea98043947d04e1ea 290 SUPERFAMILY SSF52540 5 226 8.1E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25690 ae935f057530972ea98043947d04e1ea 290 Pfam PF00005 ABC transporter 24 166 9.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS25690 ae935f057530972ea98043947d04e1ea 290 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS25690 ae935f057530972ea98043947d04e1ea 290 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 4.0E-101 T 28-03-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AL504_RS25690 ae935f057530972ea98043947d04e1ea 290 Gene3D G3DSA:3.40.50.300 1 225 8.0E-54 T 28-03-2018 AL504_RS25690 ae935f057530972ea98043947d04e1ea 290 SMART SM00382 33 216 2.5E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13615 20a58c08b533014b717fc1210305825e 487 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 174 182 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL504_RS13615 20a58c08b533014b717fc1210305825e 487 SMART SM00490 279 360 4.1E-34 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS13615 20a58c08b533014b717fc1210305825e 487 SUPERFAMILY SSF52540 95 381 5.84E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13615 20a58c08b533014b717fc1210305825e 487 Pfam PF00271 Helicase conserved C-terminal domain 254 360 2.8E-28 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS13615 20a58c08b533014b717fc1210305825e 487 Pfam PF00270 DEAD/DEAH box helicase 43 217 4.6E-51 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS13615 20a58c08b533014b717fc1210305825e 487 Gene3D G3DSA:3.40.50.300 1 247 1.9E-64 T 28-03-2018 AL504_RS13615 20a58c08b533014b717fc1210305825e 487 Gene3D G3DSA:3.40.50.300 248 473 4.2E-46 T 28-03-2018 AL504_RS13615 20a58c08b533014b717fc1210305825e 487 SMART SM00487 38 243 1.2E-62 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS22155 97a5ae7a34a25b6acb915613d19ce507 112 Pfam PF05939 Phage minor tail protein 4 110 3.2E-32 T 28-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail AL504_RS08445 6a64427bc5c2f4ba027e031052960af0 496 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 39 199 2.1E-23 T 28-03-2018 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 Gene3D G3DSA:1.10.10.60 263 312 3.1E-12 T 28-03-2018 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 SMART SM00342 223 306 4.3E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 SUPERFAMILY SSF46689 206 256 2.82E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 Gene3D G3DSA:2.60.120.280 26 188 2.2E-14 T 28-03-2018 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 Pfam PF12833 Helix-turn-helix domain 231 308 5.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 Gene3D G3DSA:1.10.10.60 204 262 4.3E-13 T 28-03-2018 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 Pfam PF12852 Cupin 8 188 1.0E-32 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL504_RS01280 5c1df6a0622b88cdecfd3bbff2683155 312 SUPERFAMILY SSF46689 259 308 1.03E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS25060 b836f5efbfb0219f1c6102001dfa8827 257 Gene3D G3DSA:3.10.350.10 44 109 2.5E-17 T 28-03-2018 AL504_RS25060 b836f5efbfb0219f1c6102001dfa8827 257 Pfam PF01551 Peptidase family M23 157 250 6.6E-28 T 28-03-2018 IPR016047 Peptidase M23 AL504_RS25060 b836f5efbfb0219f1c6102001dfa8827 257 Gene3D G3DSA:2.70.70.10 110 257 4.7E-33 T 28-03-2018 AL504_RS25060 b836f5efbfb0219f1c6102001dfa8827 257 Pfam PF01476 LysM domain 56 98 3.2E-15 T 28-03-2018 IPR018392 LysM domain AL504_RS25060 b836f5efbfb0219f1c6102001dfa8827 257 SUPERFAMILY SSF51261 55 252 8.89E-45 T 28-03-2018 IPR011055 Duplicated hybrid motif AL504_RS25060 b836f5efbfb0219f1c6102001dfa8827 257 SMART SM00257 55 99 2.0E-14 T 28-03-2018 IPR018392 LysM domain AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 Gene3D G3DSA:1.20.1640.10 800 1018 2.8E-34 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 Gene3D G3DSA:1.20.1640.10 280 498 1.2E-46 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82714 183 266 2.22E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 Gene3D G3DSA:3.30.2090.10 697 786 5.3E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 Gene3D G3DSA:3.30.2090.10 181 269 8.3E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 Gene3D G3DSA:3.30.70.1430 551 649 5.8E-13 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82866 290 490 1.23E-45 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 535 552 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 602 616 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.6E-77 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82693 548 645 5.06E-15 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 Gene3D G3DSA:3.30.70.1430 40 143 5.3E-22 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82693 136 182 6.93E-24 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82693 268 324 6.93E-24 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82693 40 131 9.68E-22 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82866 809 1006 1.05E-43 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82714 699 783 5.36E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82693 659 698 8.11E-9 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 SUPERFAMILY SSF82693 785 831 8.11E-9 T 28-03-2018 AL504_RS02640 b8c5db85c98094525ebf86033a2f952d 1025 Pfam PF00873 AcrB/AcrD/AcrF family 5 1006 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS24825 2fe57ca47f98ebdedcb93fe7a0c8fd75 227 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 65 217 6.6E-40 T 28-03-2018 IPR018655 Protein of unknown function DUF2086 AL504_RS24825 2fe57ca47f98ebdedcb93fe7a0c8fd75 227 Gene3D G3DSA:2.60.120.620 13 220 3.4E-7 T 28-03-2018 AL504_RS01335 c1da823b3751eed0f91614c9a24e1a8c 248 PIRSF PIRSF016642 3 242 3.4E-47 T 28-03-2018 IPR015834 Uncharacterised conserved protein UCP016642 AL504_RS01335 c1da823b3751eed0f91614c9a24e1a8c 248 Gene3D G3DSA:3.40.50.880 26 246 2.0E-20 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS01335 c1da823b3751eed0f91614c9a24e1a8c 248 SUPERFAMILY SSF52317 31 217 6.07E-14 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS01335 c1da823b3751eed0f91614c9a24e1a8c 248 Pfam PF09825 Biotin-protein ligase, N terminal 34 127 1.8E-7 T 28-03-2018 IPR019197 Biotin-protein ligase, N-terminal Reactome: R-HSA-196780 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 Gene3D G3DSA:3.90.78.10 236 344 7.0E-42 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 Gene3D G3DSA:3.30.43.10 16 80 2.7E-14 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 SUPERFAMILY SSF56194 218 344 2.75E-49 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 221 344 4.9E-37 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 Gene3D G3DSA:3.30.465.10 81 233 3.5E-52 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 21 340 9.5E-66 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 83.857 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 SUPERFAMILY SSF56176 17 204 1.5E-37 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS13490 da9fe82b4e6987769902e8ee45bebd02 344 Pfam PF01565 FAD binding domain 31 162 8.5E-20 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 PIRSF PIRSF005457 11 272 6.8E-97 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 Pfam PF00753 Metallo-beta-lactamase superfamily 27 184 8.0E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 185 272 3.2E-27 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 18 272 3.1E-99 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 Gene3D G3DSA:3.60.15.10 10 272 2.2E-71 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 15 272 42.771 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 63 82 - T 28-03-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 SMART SM00849 25 184 3.9E-34 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS15220 49f005a38f5151e0afde02a8245f8270 273 SUPERFAMILY SSF56281 17 272 3.67E-69 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS20430 4ee59b8eed47937f2988c6cb5d4344bd 413 Pfam PF13692 Glycosyl transferases group 1 231 367 4.0E-10 T 28-03-2018 AL504_RS20430 4ee59b8eed47937f2988c6cb5d4344bd 413 Gene3D G3DSA:3.40.50.2000 218 391 5.5E-21 T 28-03-2018 AL504_RS20430 4ee59b8eed47937f2988c6cb5d4344bd 413 Gene3D G3DSA:3.40.50.2000 1 217 4.2E-25 T 28-03-2018 AL504_RS20430 4ee59b8eed47937f2988c6cb5d4344bd 413 SUPERFAMILY SSF53756 2 403 4.19E-43 T 28-03-2018 AL504_RS20430 4ee59b8eed47937f2988c6cb5d4344bd 413 Pfam PF13579 Glycosyl transferase 4-like domain 16 200 3.4E-20 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS06550 efec6a92210d239a018a13406319ae03 107 Pfam PF05247 Flagellar transcriptional activator (FlhD) 6 104 1.2E-41 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL504_RS06550 efec6a92210d239a018a13406319ae03 107 SUPERFAMILY SSF63592 6 99 2.09E-35 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL504_RS06550 efec6a92210d239a018a13406319ae03 107 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 99 4.0E-43 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL504_RS06550 efec6a92210d239a018a13406319ae03 107 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 3 106 27.56 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL504_RS06550 efec6a92210d239a018a13406319ae03 107 Gene3D G3DSA:1.10.4000.10 5 104 2.1E-37 T 28-03-2018 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 6.9E-148 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 148 2.3E-66 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 3.8E-46 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 3.8E-46 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 3.8E-46 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 3.8E-46 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 3.8E-46 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 3.8E-46 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 SUPERFAMILY SSF52096 5 316 6.82E-102 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.936 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL504_RS28105 e931d9b07593bf5fc291efcc7026becf 321 Gene3D G3DSA:3.90.226.10 9 313 1.0E-69 T 28-03-2018 AL504_RS07895 7a2bd7e50906d0020a26b7b4c688b38c 346 Gene3D G3DSA:2.30.110.10 198 318 2.7E-20 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS07895 7a2bd7e50906d0020a26b7b4c688b38c 346 Gene3D G3DSA:2.30.110.10 54 179 5.5E-4 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS07895 7a2bd7e50906d0020a26b7b4c688b38c 346 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 201 293 2.3E-14 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS07895 7a2bd7e50906d0020a26b7b4c688b38c 346 SUPERFAMILY SSF50475 199 314 3.93E-10 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 4.9E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 4.9E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 255 4.9E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 SUPERFAMILY SSF53738 2 187 5.89E-48 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 444 9.3E-174 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 140 8.7E-43 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 443 1.8E-12 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 371 1.2E-27 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Gene3D G3DSA:3.30.310.50 379 446 4.8E-18 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Gene3D G3DSA:3.40.120.10 162 275 1.3E-28 T 28-03-2018 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 SUPERFAMILY SSF53738 162 262 7.46E-28 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 44.799 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 260 1.9E-17 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 SUPERFAMILY SSF53738 264 371 3.18E-28 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Gene3D G3DSA:3.40.120.10 3 160 8.1E-50 T 28-03-2018 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 Gene3D G3DSA:3.40.120.10 276 378 7.4E-26 T 28-03-2018 AL504_RS26465 43079f1ce9982b144e6e3a519afb19dd 447 SUPERFAMILY SSF55957 363 444 7.46E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 Gene3D G3DSA:2.40.50.140 275 337 7.0E-5 T 28-03-2018 AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 Pfam PF00005 ABC transporter 20 161 7.5E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 SMART SM00382 28 211 1.3E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 Gene3D G3DSA:3.40.50.300 1 243 7.4E-73 T 28-03-2018 AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 Pfam PF08402 TOBE domain 272 341 8.5E-11 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 SUPERFAMILY SSF50331 268 341 5.53E-8 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS19160 d668e5f9adb8325dd8b2a1308fb47f2a 351 SUPERFAMILY SSF52540 4 241 1.06E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27440 70b874063af10b03e95f0231653c8ee2 230 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 11 210 5.0E-28 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL504_RS26890 589db3c1870630e1d9832490cf806c32 253 SUPERFAMILY SSF52540 7 248 6.23E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26890 589db3c1870630e1d9832490cf806c32 253 Gene3D G3DSA:3.40.50.300 4 251 1.2E-52 T 28-03-2018 AL504_RS26890 589db3c1870630e1d9832490cf806c32 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 248 1.2E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS26890 589db3c1870630e1d9832490cf806c32 253 SMART SM00382 32 226 4.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26890 589db3c1870630e1d9832490cf806c32 253 Pfam PF00005 ABC transporter 23 177 9.4E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 Pfam PF00437 Type II/IV secretion system protein 125 387 1.2E-85 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 Gene3D G3DSA:3.40.50.300 221 482 1.1E-63 T 28-03-2018 AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 SUPERFAMILY SSF160246 11 74 4.18E-8 T 28-03-2018 AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 315 329 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 11 479 3.3E-209 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 Gene3D G3DSA:3.30.450.90 84 220 5.9E-47 T 28-03-2018 AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 SUPERFAMILY SSF52540 102 479 2.06E-104 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04115 f5ecd29fede2fa97a3fbbabbd1f834e6 482 SMART SM00382 248 371 2.7E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS22470 8ff6d68f5af299f483c97a09574b1e78 278 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 65 277 30.162 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL504_RS22470 8ff6d68f5af299f483c97a09574b1e78 278 Gene3D G3DSA:3.40.50.150 71 278 4.9E-26 T 28-03-2018 AL504_RS22470 8ff6d68f5af299f483c97a09574b1e78 278 SUPERFAMILY SSF53335 59 276 6.25E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS22470 8ff6d68f5af299f483c97a09574b1e78 278 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 98 277 2.2E-51 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL504_RS22470 8ff6d68f5af299f483c97a09574b1e78 278 Pfam PF02390 Putative methyltransferase 105 272 1.0E-52 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL504_RS13820 a17d24be6754bc8251e883ad930aece7 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 3.2E-103 T 28-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AL504_RS13820 a17d24be6754bc8251e883ad930aece7 271 SUPERFAMILY SSF52540 1 269 1.78E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13820 a17d24be6754bc8251e883ad930aece7 271 PIRSF PIRSF003092 1 271 4.2E-91 T 28-03-2018 IPR025501 ATP binding protein MinD AL504_RS13820 a17d24be6754bc8251e883ad930aece7 271 Gene3D G3DSA:3.40.50.300 1 259 6.1E-53 T 28-03-2018 AL504_RS13820 a17d24be6754bc8251e883ad930aece7 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 2.8E-18 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL504_RS14110 365114b9c904d68cad0ec4054dee93eb 326 PIRSF PIRSF017082 1 324 8.8E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14110 365114b9c904d68cad0ec4054dee93eb 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 322 4.6E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14110 365114b9c904d68cad0ec4054dee93eb 326 SUPERFAMILY SSF53850 110 286 4.13E-12 T 28-03-2018 AL504_RS14110 365114b9c904d68cad0ec4054dee93eb 326 Gene3D G3DSA:3.40.190.10 124 236 2.2E-10 T 28-03-2018 AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 SUPERFAMILY SSF53850 90 295 9.37E-35 T 28-03-2018 AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 Gene3D G3DSA:1.10.10.10 1 86 1.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.7E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 Pfam PF03466 LysR substrate binding domain 90 278 2.9E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 SUPERFAMILY SSF46785 1 110 4.51E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 Gene3D G3DSA:3.40.190.10 88 179 5.5E-19 T 28-03-2018 AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05015 4dff339e178e6dfb50cbc1b3ecded04b 303 Gene3D G3DSA:3.40.190.10 180 264 7.6E-12 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 302 1.5E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.6E-12 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 9.6E-12 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 9.6E-12 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 9.6E-12 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 SUPERFAMILY SSF55424 315 404 1.37E-17 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 Gene3D G3DSA:3.50.50.60 4 131 1.5E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 Gene3D G3DSA:3.30.390.30 322 406 6.5E-20 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 SUPERFAMILY SSF51905 146 308 1.75E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 SUPERFAMILY SSF51905 6 192 4.57E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 2.0E-20 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.0E-20 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.0E-20 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 2.0E-20 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.0E-20 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 Gene3D G3DSA:3.40.50.720 132 305 6.9E-30 T 28-03-2018 AL504_RS03850 751109118e63da2b5a956f658b05ea33 408 Pfam PF14759 Reductase C-terminal 322 404 4.4E-20 T 28-03-2018 IPR028202 Reductase, C-terminal AL504_RS11525 6517fbe65b96e10ee090e96a071b2204 66 Pfam PF05532 CsbD-like 4 56 1.8E-20 T 28-03-2018 IPR008462 CsbD-like domain AL504_RS11525 6517fbe65b96e10ee090e96a071b2204 66 Gene3D G3DSA:1.10.1470.10 1 65 9.1E-22 T 28-03-2018 IPR008462 CsbD-like domain AL504_RS11525 6517fbe65b96e10ee090e96a071b2204 66 SUPERFAMILY SSF69047 1 65 1.7E-25 T 28-03-2018 IPR008462 CsbD-like domain AL504_RS11525 6517fbe65b96e10ee090e96a071b2204 66 PIRSF PIRSF039008 1 66 3.9E-31 T 28-03-2018 IPR026042 Stress response protein YjbJ AL504_RS26920 b0a9ff98db795dcad4743b3b9b935fa8 423 Gene3D G3DSA:3.40.50.150 107 391 9.9E-62 T 28-03-2018 AL504_RS26920 b0a9ff98db795dcad4743b3b9b935fa8 423 SUPERFAMILY SSF53335 121 392 2.32E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS26920 b0a9ff98db795dcad4743b3b9b935fa8 423 Pfam PF02353 Mycolic acid cyclopropane synthetase 110 387 5.3E-95 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS26920 b0a9ff98db795dcad4743b3b9b935fa8 423 PIRSF PIRSF003085 4 416 8.0E-131 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL504_RS11465 7c69e49ad37fceec7b2b32ace073989c 391 Pfam PF07690 Major Facilitator Superfamily 10 321 1.1E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS11465 7c69e49ad37fceec7b2b32ace073989c 391 Gene3D G3DSA:1.20.1250.20 3 190 3.5E-24 T 28-03-2018 AL504_RS11465 7c69e49ad37fceec7b2b32ace073989c 391 Gene3D G3DSA:1.20.1250.20 194 389 6.6E-22 T 28-03-2018 AL504_RS11465 7c69e49ad37fceec7b2b32ace073989c 391 SUPERFAMILY SSF103473 4 381 4.45E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Gene3D G3DSA:3.30.420.40 19 204 1.8E-56 T 28-03-2018 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 SUPERFAMILY SSF53067 19 194 2.85E-50 T 28-03-2018 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Pfam PF00012 Hsp70 protein 21 602 2.9E-178 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 619 42.767 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 334 348 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 618 1.0E-275 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 SUPERFAMILY SSF100920 387 537 4.84E-48 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 SUPERFAMILY SSF53067 198 378 1.36E-49 T 28-03-2018 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Gene3D G3DSA:3.90.640.10 247 300 2.1E-13 T 28-03-2018 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Gene3D G3DSA:2.60.34.10 390 532 2.3E-47 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 331 347 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 150 170 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 209 219 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 362 382 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.6E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 203 216 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Gene3D G3DSA:3.40.47.10 301 376 5.0E-4 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Gene3D G3DSA:3.30.420.40 205 246 6.1E-17 T 28-03-2018 AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 SUPERFAMILY SSF100934 507 618 1.63E-31 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL504_RS31280 414f34b2f345540979eaa34e070894bc 620 Gene3D G3DSA:1.20.1270.10 533 618 1.1E-10 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 Gene3D G3DSA:3.40.640.10 126 372 1.4E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 Gene3D G3DSA:1.10.10.10 1 87 9.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 SUPERFAMILY SSF46785 6 77 2.93E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 Pfam PF00155 Aminotransferase class I and II 141 452 4.0E-29 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 SMART SM00345 14 73 8.6E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 SUPERFAMILY SSF53383 104 466 7.04E-68 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 Gene3D G3DSA:3.90.1150.10 373 469 9.3E-13 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS02590 a891977bd8c89507954ff23fa7fbf5ac 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 7.6E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28845 407dbdb3bcdf7856d7a037f61781fd88 227 Gene3D G3DSA:1.10.3720.10 1 222 1.4E-39 T 28-03-2018 AL504_RS28845 407dbdb3bcdf7856d7a037f61781fd88 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 206 3.2E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS28845 407dbdb3bcdf7856d7a037f61781fd88 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 2.2E-27 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS28845 407dbdb3bcdf7856d7a037f61781fd88 227 SUPERFAMILY SSF161098 14 202 4.97E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 SUPERFAMILY SSF51735 14 252 1.67E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 3.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 Gene3D G3DSA:3.40.50.720 51 252 1.2E-48 T 28-03-2018 AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 Gene3D G3DSA:3.40.50.720 8 50 1.2E-4 T 28-03-2018 AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS07655 9c170643f9dfb1219c2b64366bd9d4dc 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 4.5E-49 T 28-03-2018 AL504_RS06820 e0f2c64c72bcc554ffe52d10bddd6430 204 Gene3D G3DSA:3.10.610.10 45 150 3.2E-9 T 28-03-2018 AL504_RS06820 e0f2c64c72bcc554ffe52d10bddd6430 204 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 3.2E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06820 e0f2c64c72bcc554ffe52d10bddd6430 204 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06820 e0f2c64c72bcc554ffe52d10bddd6430 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 3.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06820 e0f2c64c72bcc554ffe52d10bddd6430 204 Pfam PF11612 Type II secretion system (T2SS), protein J 64 197 1.6E-7 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL504_RS06820 e0f2c64c72bcc554ffe52d10bddd6430 204 SUPERFAMILY SSF54523 54 201 7.46E-11 T 28-03-2018 AL504_RS09250 586a3c70d450be5fc4d48c89cce64710 290 Pfam PF03473 MOSC domain 159 285 2.3E-28 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL504_RS09250 586a3c70d450be5fc4d48c89cce64710 290 SUPERFAMILY SSF50800 167 288 2.51E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL504_RS09250 586a3c70d450be5fc4d48c89cce64710 290 SUPERFAMILY SSF50800 1 51 2.51E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL504_RS09250 586a3c70d450be5fc4d48c89cce64710 290 SUPERFAMILY SSF141673 7 134 7.85E-39 T 28-03-2018 AL504_RS09250 586a3c70d450be5fc4d48c89cce64710 290 Gene3D G3DSA:2.40.33.20 1 289 1.9E-47 T 28-03-2018 AL504_RS09250 586a3c70d450be5fc4d48c89cce64710 290 Pfam PF03476 MOSC N-terminal beta barrel domain 2 120 1.3E-32 T 28-03-2018 IPR005303 MOSC, N-terminal beta barrel AL504_RS24030 87e77484940f7933e80a3c4913b42027 310 SUPERFAMILY SSF103481 36 141 6.54E-14 T 28-03-2018 AL504_RS24030 87e77484940f7933e80a3c4913b42027 310 Pfam PF00892 EamA-like transporter family 152 290 2.2E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS24030 87e77484940f7933e80a3c4913b42027 310 Pfam PF00892 EamA-like transporter family 8 137 2.6E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS24030 87e77484940f7933e80a3c4913b42027 310 SUPERFAMILY SSF103481 192 296 6.28E-12 T 28-03-2018 AL504_RS26840 90aa83272a71b42e46ab40018d16c4f1 352 Pfam PF06144 DNA polymerase III, delta subunit 25 198 2.5E-24 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AL504_RS26840 90aa83272a71b42e46ab40018d16c4f1 352 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 345 1.9E-74 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AL504_RS26840 90aa83272a71b42e46ab40018d16c4f1 352 Gene3D G3DSA:1.20.272.10 232 352 2.1E-22 T 28-03-2018 AL504_RS26840 90aa83272a71b42e46ab40018d16c4f1 352 SUPERFAMILY SSF48019 221 349 1.19E-24 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL504_RS26840 90aa83272a71b42e46ab40018d16c4f1 352 SUPERFAMILY SSF52540 13 219 8.5E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26840 90aa83272a71b42e46ab40018d16c4f1 352 Gene3D G3DSA:1.10.8.60 152 231 9.9E-25 T 28-03-2018 AL504_RS26840 90aa83272a71b42e46ab40018d16c4f1 352 Gene3D G3DSA:3.40.50.300 1 149 1.6E-16 T 28-03-2018 AL504_RS15550 ee9ac24610dbe319bbae5946f65ec03a 159 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 84.0 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL504_RS15550 ee9ac24610dbe319bbae5946f65ec03a 159 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 6.9E-59 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL504_RS15550 ee9ac24610dbe319bbae5946f65ec03a 159 Pfam PF03477 ATP cone domain 50 136 2.9E-14 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 SUPERFAMILY SSF51735 11 253 5.43E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 3.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 9.2E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 9.2E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 9.2E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 1.5E-64 T 28-03-2018 AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 Gene3D G3DSA:3.40.50.720 7 53 4.1E-6 T 28-03-2018 AL504_RS10645 bfcec0580458e4711b2dca3242881ade 254 Gene3D G3DSA:3.40.50.720 54 254 1.9E-67 T 28-03-2018 AL504_RS03090 e204bf9c1b090415af76a9404426e73a 150 Pfam PF12802 MarR family 40 105 2.3E-12 T 28-03-2018 AL504_RS03090 e204bf9c1b090415af76a9404426e73a 150 Gene3D G3DSA:1.10.10.10 2 150 9.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03090 e204bf9c1b090415af76a9404426e73a 150 SMART SM00347 34 148 3.3E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS03090 e204bf9c1b090415af76a9404426e73a 150 SUPERFAMILY SSF46785 12 144 2.13E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03090 e204bf9c1b090415af76a9404426e73a 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 80 114 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 84 4.0E-35 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 SUPERFAMILY SSF51344 3 85 2.22E-25 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 127 1.2E-40 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 Gene3D G3DSA:1.20.5.440 90 128 1.5E-5 T 28-03-2018 AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 Gene3D G3DSA:2.60.15.10 1 89 1.3E-30 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 SUPERFAMILY SSF46604 88 135 1.15E-7 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 6.5E-30 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16910 a9f667b7247c990f7cff7e15a3c7504e 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 132 21.577 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 Gene3D G3DSA:2.160.20.20 46 504 2.5E-5 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 Pfam PF03797 Autotransporter beta-domain 654 908 1.8E-58 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 Gene3D G3DSA:2.40.128.130 586 928 7.5E-59 T 28-03-2018 AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 409 928 1.4E-46 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 SUPERFAMILY SSF103515 595 928 2.09E-61 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 339 370 1.6E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 SMART SM00869 651 918 7.7E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 SUPERFAMILY SSF51126 147 237 3.77E-18 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS02530 d23a6d0815607b7770a34845431081ff 928 SUPERFAMILY SSF51126 265 487 3.77E-18 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Gene3D G3DSA:2.40.110.10 121 223 1.8E-8 T 28-03-2018 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Gene3D G3DSA:1.20.140.10 610 774 1.0E-32 T 28-03-2018 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 SUPERFAMILY SSF47203 230 371 4.51E-31 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Gene3D G3DSA:1.20.140.10 224 384 1.3E-28 T 28-03-2018 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 SUPERFAMILY SSF56645 404 633 1.28E-62 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Gene3D G3DSA:1.10.540.10 390 512 5.0E-22 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Gene3D G3DSA:1.10.540.10 6 118 2.8E-14 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Gene3D G3DSA:2.40.110.10 513 609 4.5E-29 T 28-03-2018 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 SUPERFAMILY SSF47203 622 771 1.51E-16 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 367 4.0E-25 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 622 771 2.8E-17 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 517 610 8.7E-19 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 86 2.0E-12 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 404 512 6.4E-17 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS00840 6e3a23408febaa7dbaefffe7d1bc8ed1 776 SUPERFAMILY SSF56645 7 219 8.38E-27 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS10435 ccd0eec0c1d51a4b1895122cc936998d 231 Pfam PF11254 Protein of unknown function (DUF3053) 12 225 6.7E-51 T 28-03-2018 IPR021413 Protein of unknown function DUF3053 AL504_RS10435 ccd0eec0c1d51a4b1895122cc936998d 231 Gene3D G3DSA:1.10.287.620 51 230 0.002 T 28-03-2018 AL504_RS23790 8c6006450196812a8ccb2969975b665d 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 180 1.4E-26 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23790 8c6006450196812a8ccb2969975b665d 181 Pfam PF08281 Sigma-70, region 4 124 176 4.1E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23790 8c6006450196812a8ccb2969975b665d 181 Gene3D G3DSA:1.10.1740.10 1 102 1.4E-21 T 28-03-2018 AL504_RS23790 8c6006450196812a8ccb2969975b665d 181 Pfam PF04542 Sigma-70 region 2 25 90 4.6E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23790 8c6006450196812a8ccb2969975b665d 181 SUPERFAMILY SSF88659 117 180 8.6E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23790 8c6006450196812a8ccb2969975b665d 181 Gene3D G3DSA:1.10.10.10 103 181 9.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23790 8c6006450196812a8ccb2969975b665d 181 SUPERFAMILY SSF88946 2 110 1.23E-24 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS02995 e2ec7b9c601c1737fa72eb6153133a30 208 Gene3D G3DSA:2.60.120.10 5 195 8.9E-23 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS02995 e2ec7b9c601c1737fa72eb6153133a30 208 SUPERFAMILY SSF51182 14 196 2.94E-36 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 Pfam PF03466 LysR substrate binding domain 96 301 1.5E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 1.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 Gene3D G3DSA:1.10.10.10 5 92 2.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 Gene3D G3DSA:3.40.190.10 96 188 7.7E-13 T 28-03-2018 AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 Gene3D G3DSA:3.40.190.10 189 273 1.8E-15 T 28-03-2018 AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 SUPERFAMILY SSF46785 6 118 2.32E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05720 a771e740766f5e6abfcf72ec89fe4874 321 SUPERFAMILY SSF53850 98 301 2.44E-38 T 28-03-2018 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 Gene3D G3DSA:3.40.190.10 31 149 8.8E-14 T 28-03-2018 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 SUPERFAMILY SSF53850 30 347 4.73E-58 T 28-03-2018 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 153 167 4.3E-8 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 4.3E-8 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 4.3E-8 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 39 55 4.3E-8 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 55 76 4.3E-8 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 Gene3D G3DSA:3.40.190.10 150 303 2.1E-27 T 28-03-2018 AL504_RS26660 b7145aa54d10f7a231c9e0d64c960d54 351 Pfam PF13416 Bacterial extracellular solute-binding protein 49 312 3.2E-28 T 28-03-2018 AL504_RS02555 7a84763fa8f48f08c0e0cb3d098c3840 212 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 177 199 3.7E-5 T 28-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AL504_RS02555 7a84763fa8f48f08c0e0cb3d098c3840 212 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 25 48 3.7E-5 T 28-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AL504_RS02555 7a84763fa8f48f08c0e0cb3d098c3840 212 Pfam PF01292 Prokaryotic cytochrome b561 22 211 3.4E-24 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL504_RS02555 7a84763fa8f48f08c0e0cb3d098c3840 212 Gene3D G3DSA:1.20.950.20 17 212 2.7E-33 T 28-03-2018 AL504_RS02555 7a84763fa8f48f08c0e0cb3d098c3840 212 SUPERFAMILY SSF81342 21 212 5.65E-33 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 SUPERFAMILY SSF53850 90 291 3.14E-37 T 28-03-2018 AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 Pfam PF03466 LysR substrate binding domain 88 291 4.1E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 Gene3D G3DSA:3.40.190.10 179 266 1.0E-19 T 28-03-2018 AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 Gene3D G3DSA:1.10.10.10 1 83 2.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 SUPERFAMILY SSF46785 2 84 4.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26720 979461ba3ffb75e17cbc11c17705bc93 307 Gene3D G3DSA:3.40.190.10 89 178 7.7E-17 T 28-03-2018 AL504_RS06240 37dd32c2eb3d43655bb39d3cea973df8 282 SUPERFAMILY SSF110997 205 279 1.7E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS06240 37dd32c2eb3d43655bb39d3cea973df8 282 Pfam PF05036 Sporulation related domain 204 279 7.8E-18 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS06240 37dd32c2eb3d43655bb39d3cea973df8 282 Gene3D G3DSA:3.30.70.1070 201 282 1.5E-17 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL504_RS25475 b4d6cc8fbb535b6d26b79b92785b6dc6 83 Pfam PF02597 ThiS family 9 83 1.5E-17 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AL504_RS25475 b4d6cc8fbb535b6d26b79b92785b6dc6 83 Gene3D G3DSA:3.10.20.30 6 83 4.8E-19 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS25475 b4d6cc8fbb535b6d26b79b92785b6dc6 83 SUPERFAMILY SSF54285 6 83 3.18E-16 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 Pfam PF03572 Peptidase family S41 250 416 1.2E-34 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 SUPERFAMILY SSF50156 137 239 3.15E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 SMART SM00245 198 418 2.0E-40 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 SMART SM00228 151 222 1.8E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 SUPERFAMILY SSF52096 115 169 4.31E-46 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 SUPERFAMILY SSF52096 243 418 4.31E-46 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 157 211 5.7E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 Gene3D G3DSA:2.30.42.10 136 223 2.8E-14 T 28-03-2018 AL504_RS23895 3a6a9d23359e49a10a6fc5f3fd37b8e6 470 Gene3D G3DSA:3.90.226.10 224 449 2.3E-40 T 28-03-2018 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 SUPERFAMILY SSF54713 151 288 8.5E-47 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 SUPERFAMILY SSF54713 56 147 1.31E-22 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 SUPERFAMILY SSF46934 3 56 7.96E-14 T 28-03-2018 IPR009060 UBA-like GO:0005515 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 Gene3D G3DSA:1.10.8.10 1 56 6.2E-19 T 28-03-2018 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 78.637 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 Gene3D G3DSA:3.30.479.20 157 287 2.0E-47 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 Pfam PF00889 Elongation factor TS 73 271 1.2E-69 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 287 5.9E-92 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 Gene3D G3DSA:3.30.479.20 58 156 2.5E-23 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS06195 f0ee42674612c13c8db90e1d541bfed9 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 SMART SM00138 13 276 1.2E-27 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 Gene3D G3DSA:3.40.50.150 78 278 2.7E-32 T 28-03-2018 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 SUPERFAMILY SSF53335 80 257 1.42E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 Pfam PF01739 CheR methyltransferase, SAM binding domain 80 257 4.0E-35 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 PRINTS PR00996 Glutamate methyltransferase family signature 140 156 3.4E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 3.4E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 3.4E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 3.4E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 3.4E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 3.4E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 SUPERFAMILY SSF47757 5 78 7.59E-6 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 Pfam PF03705 CheR methyltransferase, all-alpha domain 18 66 2.4E-10 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS23825 3b2b6074f088483322d50c3a9fabc593 281 Gene3D G3DSA:1.10.155.10 7 77 2.0E-5 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS20425 0561bc57161465b69deaa39ce0f87866 390 Gene3D G3DSA:3.40.640.10 2 250 6.6E-56 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS20425 0561bc57161465b69deaa39ce0f87866 390 SUPERFAMILY SSF53383 4 389 3.26E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS20425 0561bc57161465b69deaa39ce0f87866 390 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 385 1.1E-140 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS20425 0561bc57161465b69deaa39ce0f87866 390 Gene3D G3DSA:3.90.1150.10 251 390 4.7E-39 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS20425 0561bc57161465b69deaa39ce0f87866 390 PIRSF PIRSF000390 1 390 4.5E-113 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS15010 2d8bf7f164a78970c1b43f4f4e59a62a 230 Pfam PF13174 Tetratricopeptide repeat 184 216 6.0E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS15010 2d8bf7f164a78970c1b43f4f4e59a62a 230 Gene3D G3DSA:1.25.40.10 110 230 3.6E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15010 2d8bf7f164a78970c1b43f4f4e59a62a 230 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 109 226 3.6E-32 T 28-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal AL504_RS15010 2d8bf7f164a78970c1b43f4f4e59a62a 230 SUPERFAMILY SSF48452 111 228 1.7E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15010 2d8bf7f164a78970c1b43f4f4e59a62a 230 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 7 229 17.87 T 28-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AL504_RS15010 2d8bf7f164a78970c1b43f4f4e59a62a 230 Gene3D G3DSA:1.25.40.10 14 80 0.034 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15010 2d8bf7f164a78970c1b43f4f4e59a62a 230 Pfam PF13432 Tetratricopeptide repeat 113 180 2.0E-10 T 28-03-2018 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 514 72.961 T 28-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 Gene3D G3DSA:1.20.5.570 487 514 1.0E-18 T 28-03-2018 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 SUPERFAMILY SSF143968 350 514 2.35E-66 T 28-03-2018 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 SUPERFAMILY SSF50475 3 349 4.32E-109 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 281 1.9E-74 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 305 482 4.0E-75 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 Gene3D G3DSA:3.40.1670.10 350 486 4.9E-51 T 28-03-2018 AL504_RS25715 e1acccd6bc91b69c146d47ebcbcb1a58 514 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 458 2.1E-164 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL504_RS28425 a86d687de942ebd40b11a969e47871ba 376 SUPERFAMILY SSF53756 4 368 1.66E-68 T 28-03-2018 AL504_RS28425 a86d687de942ebd40b11a969e47871ba 376 Pfam PF13439 Glycosyltransferase Family 4 13 179 2.9E-21 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS28425 a86d687de942ebd40b11a969e47871ba 376 Pfam PF00534 Glycosyl transferases group 1 198 348 3.0E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS28425 a86d687de942ebd40b11a969e47871ba 376 Gene3D G3DSA:3.40.50.2000 1 185 1.7E-14 T 28-03-2018 AL504_RS28425 a86d687de942ebd40b11a969e47871ba 376 Gene3D G3DSA:3.40.50.2000 186 347 3.0E-33 T 28-03-2018 AL504_RS12010 d05b15f805469beeb7f6a2d9879400e6 197 Pfam PF00877 NlpC/P60 family 78 184 6.4E-28 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL504_RS12010 d05b15f805469beeb7f6a2d9879400e6 197 Gene3D G3DSA:2.30.260.10 111 185 7.5E-22 T 28-03-2018 AL504_RS12010 d05b15f805469beeb7f6a2d9879400e6 197 Gene3D G3DSA:3.90.1720.10 19 110 8.0E-14 T 28-03-2018 AL504_RS12010 d05b15f805469beeb7f6a2d9879400e6 197 SUPERFAMILY SSF54001 66 185 5.23E-39 T 28-03-2018 AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 SMART SM00862 154 231 3.1E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 2.7E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 SUPERFAMILY SSF46894 136 231 9.07E-25 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 Gene3D G3DSA:1.10.10.10 148 233 1.3E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 SMART SM00448 6 117 1.8E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 Pfam PF00072 Response regulator receiver domain 9 118 3.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 SUPERFAMILY SSF52172 4 129 8.82E-41 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS13765 0546956be5b05402b3a1a55e8e7e6930 233 Gene3D G3DSA:3.40.50.2300 1 147 3.3E-39 T 28-03-2018 AL504_RS22725 38eebd0e3cc0da45ee9e221d18747d0a 232 Gene3D G3DSA:1.20.1050.10 157 226 2.8E-15 T 28-03-2018 AL504_RS22725 38eebd0e3cc0da45ee9e221d18747d0a 232 Gene3D G3DSA:1.20.1050.10 112 156 2.2E-11 T 28-03-2018 AL504_RS22725 38eebd0e3cc0da45ee9e221d18747d0a 232 SUPERFAMILY SSF52833 12 102 1.14E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS22725 38eebd0e3cc0da45ee9e221d18747d0a 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 21 98 8.8E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS22725 38eebd0e3cc0da45ee9e221d18747d0a 232 Gene3D G3DSA:3.40.30.10 18 111 1.5E-24 T 28-03-2018 AL504_RS22725 38eebd0e3cc0da45ee9e221d18747d0a 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 142 222 1.5E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS22725 38eebd0e3cc0da45ee9e221d18747d0a 232 SUPERFAMILY SSF47616 102 229 1.04E-31 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS09170 67d03177cb27deffdfc3a2b50d81c2f5 243 SMART SM00382 26 213 1.0E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09170 67d03177cb27deffdfc3a2b50d81c2f5 243 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS09170 67d03177cb27deffdfc3a2b50d81c2f5 243 Gene3D G3DSA:3.40.50.300 1 242 1.1E-73 T 28-03-2018 AL504_RS09170 67d03177cb27deffdfc3a2b50d81c2f5 243 PIRSF PIRSF039085 1 241 1.3E-114 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS09170 67d03177cb27deffdfc3a2b50d81c2f5 243 SUPERFAMILY SSF52540 1 235 1.52E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09170 67d03177cb27deffdfc3a2b50d81c2f5 243 Pfam PF00005 ABC transporter 17 165 1.6E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 9.1E-33 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 SUPERFAMILY SSF50104 127 272 1.56E-60 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 Gene3D G3DSA:4.10.950.10 197 273 2.9E-35 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 Gene3D G3DSA:2.30.30.30 119 195 7.4E-31 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 Gene3D G3DSA:2.40.50.140 1 114 2.1E-43 T 28-03-2018 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 SUPERFAMILY SSF50249 3 124 2.16E-46 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.121 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 SMART SM01382 124 252 6.3E-88 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 SMART SM01383 42 118 1.8E-42 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 7.0E-56 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 1.4E-127 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19715 22721fd9be6e9cf39e2ae3614c88f450 275 PIRSF PIRSF002158 6 275 9.1E-101 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS20625 49bb72c90881ee76e06947ecf4faf72a 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS20625 49bb72c90881ee76e06947ecf4faf72a 434 Pfam PF07690 Major Facilitator Superfamily 33 377 5.6E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS20625 49bb72c90881ee76e06947ecf4faf72a 434 Gene3D G3DSA:1.20.1250.20 15 230 3.1E-27 T 28-03-2018 AL504_RS20625 49bb72c90881ee76e06947ecf4faf72a 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS20625 49bb72c90881ee76e06947ecf4faf72a 434 SUPERFAMILY SSF103473 23 433 6.93E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS20625 49bb72c90881ee76e06947ecf4faf72a 434 Gene3D G3DSA:1.20.1250.20 231 434 1.1E-26 T 28-03-2018 AL504_RS22715 d544e139f0a71fa8e0c5ef2168311c61 367 Gene3D G3DSA:3.60.15.10 19 367 1.2E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS22715 d544e139f0a71fa8e0c5ef2168311c61 367 Pfam PF12706 Beta-lactamase superfamily domain 205 331 2.3E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS22715 d544e139f0a71fa8e0c5ef2168311c61 367 SUPERFAMILY SSF56281 40 179 2.88E-43 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS22715 d544e139f0a71fa8e0c5ef2168311c61 367 SUPERFAMILY SSF56281 210 364 2.88E-43 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS22715 d544e139f0a71fa8e0c5ef2168311c61 367 SMART SM00849 60 309 0.0065 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 Gene3D G3DSA:1.10.3090.10 176 433 7.6E-42 T 28-03-2018 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 26 447 1.3E-155 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 SUPERFAMILY SSF81891 178 410 6.67E-52 T 28-03-2018 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 Pfam PF01743 Poly A polymerase head domain 54 179 1.6E-36 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 SUPERFAMILY SSF81301 29 176 1.96E-41 T 28-03-2018 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 208 266 5.5E-19 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 18 447 37.116 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 Gene3D G3DSA:3.30.460.10 23 175 4.4E-51 T 28-03-2018 AL504_RS14230 281f898d719a60b7f0e16856d0dda99a 458 Pfam PF12626 Polymerase A arginine-rich C-terminus 319 444 1.0E-40 T 28-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AL504_RS19245 e270500d5bdd5a94605018fe5f1ff583 318 Pfam PF01548 Transposase 8 140 5.5E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL504_RS19245 e270500d5bdd5a94605018fe5f1ff583 318 Gene3D G3DSA:3.40.50.10730 5 166 4.0E-4 T 28-03-2018 AL504_RS19245 e270500d5bdd5a94605018fe5f1ff583 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 273 2.8E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL504_RS11005 e270500d5bdd5a94605018fe5f1ff583 318 Pfam PF01548 Transposase 8 140 5.5E-21 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL504_RS11005 e270500d5bdd5a94605018fe5f1ff583 318 Gene3D G3DSA:3.40.50.10730 5 166 4.0E-4 T 28-03-2018 AL504_RS11005 e270500d5bdd5a94605018fe5f1ff583 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 273 2.8E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 Pfam PF08946 Osmosensory transporter coiled coil 461 512 7.4E-18 T 28-03-2018 IPR015041 Osmosensory transporter coiled coil AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 SUPERFAMILY SSF103473 30 452 2.35E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 Gene3D G3DSA:1.10.287.510 453 510 7.4E-4 T 28-03-2018 AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 Gene3D G3DSA:1.20.1250.20 253 452 6.9E-26 T 28-03-2018 AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 39 438 2.9E-134 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 337 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 Gene3D G3DSA:1.20.1250.20 5 252 5.1E-24 T 28-03-2018 AL504_RS26515 a8dc4fa330243e6aa67f71606da68c93 512 Pfam PF00083 Sugar (and other) transporter 33 452 1.7E-59 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS02350 e9f102da57d024d8b4abcc53be8e0581 110 Gene3D G3DSA:1.25.40.10 1 110 1.4E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS02350 e9f102da57d024d8b4abcc53be8e0581 110 SUPERFAMILY SSF48452 7 81 2.61E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 SUPERFAMILY SSF54631 70 204 1.39E-28 T 28-03-2018 AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 SUPERFAMILY SSF56176 205 286 3.27E-20 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 Pfam PF03471 Transporter associated domain 210 284 1.2E-17 T 28-03-2018 IPR005170 Transporter-associated domain AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 SMART SM01091 207 285 7.2E-25 T 28-03-2018 IPR005170 Transporter-associated domain AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 Pfam PF00571 CBS domain 99 131 0.0017 T 28-03-2018 IPR000644 CBS domain AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 Pfam PF00571 CBS domain 142 191 4.7E-4 T 28-03-2018 IPR000644 CBS domain AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 Gene3D G3DSA:3.10.580.10 52 197 6.2E-32 T 28-03-2018 AL504_RS25565 6b59649d14028ea91a83e0768dc777f4 296 Gene3D G3DSA:3.30.465.10 198 285 1.2E-24 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS15585 b8b9eb534078d813d1a70abbc1dc9483 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL504_RS15585 b8b9eb534078d813d1a70abbc1dc9483 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 123 6.6E-39 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL504_RS15585 b8b9eb534078d813d1a70abbc1dc9483 123 SUPERFAMILY SSF89360 15 109 1.9E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL504_RS15585 b8b9eb534078d813d1a70abbc1dc9483 123 Gene3D G3DSA:2.60.300.12 18 123 2.5E-39 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL504_RS15585 b8b9eb534078d813d1a70abbc1dc9483 123 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 123 37.466 T 28-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AL504_RS15585 b8b9eb534078d813d1a70abbc1dc9483 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 118 1.1E-20 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SUPERFAMILY SSF55781 294 494 6.38E-37 T 28-03-2018 IPR029016 GAF domain-like AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Gene3D G3DSA:1.10.287.130 497 565 1.9E-11 T 28-03-2018 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SUPERFAMILY SSF55874 559 722 1.63E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SMART SM00387 613 724 4.3E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SMART SM00388 507 569 3.8E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Pfam PF08446 PAS fold 16 116 2.5E-8 T 28-03-2018 IPR013654 PAS fold-2 GO:0006355 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SUPERFAMILY SSF47384 497 568 1.77E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Gene3D G3DSA:3.30.450.40 125 310 5.9E-39 T 28-03-2018 IPR029016 GAF domain-like AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Pfam PF00512 His Kinase A (phospho-acceptor) domain 508 569 1.6E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SUPERFAMILY SSF55781 130 309 1.08E-53 T 28-03-2018 IPR029016 GAF domain-like AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SUPERFAMILY SSF55785 10 120 4.34E-23 T 28-03-2018 IPR000014 PAS domain AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Pfam PF01590 GAF domain 143 307 4.9E-18 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Gene3D G3DSA:3.30.450.20 3 118 5.4E-12 T 28-03-2018 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 SMART SM00065 142 320 1.3E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Pfam PF00360 Phytochrome region 325 500 1.1E-36 T 28-03-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 614 719 1.3E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 PRINTS PR01033 Phytochrome signature 244 265 7.4E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 PRINTS PR01033 Phytochrome signature 426 445 7.4E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 PRINTS PR01033 Phytochrome signature 460 478 7.4E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 PRINTS PR01033 Phytochrome signature 157 176 7.4E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AL504_RS26365 3753852403bb3fb72b9eb9847fca938f 730 Gene3D G3DSA:3.30.565.10 574 729 3.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS05185 93231e08ecfe34042cfaf84da2908fb6 212 Pfam PF02660 Glycerol-3-phosphate acyltransferase 17 199 2.3E-52 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL504_RS05185 93231e08ecfe34042cfaf84da2908fb6 212 SMART SM01207 16 200 3.3E-87 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL504_RS05185 93231e08ecfe34042cfaf84da2908fb6 212 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 10 208 3.3E-61 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL504_RS05185 93231e08ecfe34042cfaf84da2908fb6 212 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 13 208 20.839 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL504_RS24410 28d9490b30b72b11ac4fa09e434d5dc9 317 Gene3D G3DSA:1.10.10.60 211 268 1.3E-7 T 28-03-2018 AL504_RS24410 28d9490b30b72b11ac4fa09e434d5dc9 317 Pfam PF12833 Helix-turn-helix domain 236 313 1.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24410 28d9490b30b72b11ac4fa09e434d5dc9 317 Gene3D G3DSA:1.10.10.60 269 317 7.0E-12 T 28-03-2018 AL504_RS24410 28d9490b30b72b11ac4fa09e434d5dc9 317 SMART SM00342 229 312 1.4E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24410 28d9490b30b72b11ac4fa09e434d5dc9 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 308 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS24410 28d9490b30b72b11ac4fa09e434d5dc9 317 SUPERFAMILY SSF46689 267 313 2.58E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 SUPERFAMILY SSF51735 4 218 2.84E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 Pfam PF00106 short chain dehydrogenase 4 191 7.6E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 Gene3D G3DSA:3.40.50.720 2 279 1.3E-49 T 28-03-2018 AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.2E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.2E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.2E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.2E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07380 56b57add0222bff7635fa120f7d4589b 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05060 c508026d098f8f854845880f021ddd54 241 SUPERFAMILY SSF56784 23 236 2.49E-45 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05060 c508026d098f8f854845880f021ddd54 241 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 23 234 5.1E-58 T 28-03-2018 AL504_RS05060 c508026d098f8f854845880f021ddd54 241 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 26 201 7.0E-30 T 28-03-2018 AL504_RS05060 c508026d098f8f854845880f021ddd54 241 Gene3D G3DSA:3.40.50.1000 21 51 0.31 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05060 c508026d098f8f854845880f021ddd54 241 Gene3D G3DSA:1.10.150.210 52 85 3.8E-21 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AL504_RS05060 c508026d098f8f854845880f021ddd54 241 Gene3D G3DSA:3.40.50.1000 86 235 1.7E-23 T 28-03-2018 IPR023214 HAD-like domain AL504_RS05060 c508026d098f8f854845880f021ddd54 241 Pfam PF12710 haloacid dehalogenase-like hydrolase 27 201 3.0E-23 T 28-03-2018 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 Gene3D G3DSA:3.50.50.60 3 357 8.7E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 290 303 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 384 3.6E-82 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 Pfam PF01494 FAD binding domain 150 315 5.8E-10 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.1E-13 T 28-03-2018 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 8.1E-13 T 28-03-2018 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 8.1E-13 T 28-03-2018 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 SUPERFAMILY SSF51905 6 180 4.64E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13715 04a7dd7cc61f944f4b736c5cb3d1f1a1 389 SUPERFAMILY SSF51905 263 376 4.64E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07465 d60a5fe36f39d6ac9bce013743840c1b 284 Pfam PF05853 beta-keto acid cleavage enzyme 15 281 4.6E-69 T 28-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 AL504_RS07465 d60a5fe36f39d6ac9bce013743840c1b 284 Gene3D G3DSA:3.20.20.70 13 284 5.8E-76 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS28680 16559f78a1b89d14ade1b669941c9558 370 PIRSF PIRSF015557 1 368 1.1E-138 T 28-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 AL504_RS28680 16559f78a1b89d14ade1b669941c9558 370 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 4 363 8.7E-133 T 28-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 AL504_RS28680 16559f78a1b89d14ade1b669941c9558 370 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 4 364 8.5E-136 T 28-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 AL504_RS28680 16559f78a1b89d14ade1b669941c9558 370 Gene3D G3DSA:3.40.50.720 14 369 8.1E-4 T 28-03-2018 AL504_RS24090 c16b752ab7dc4b2351e707433660a1ea 257 Gene3D G3DSA:3.40.30.10 113 255 4.6E-20 T 28-03-2018 AL504_RS24090 c16b752ab7dc4b2351e707433660a1ea 257 Pfam PF13098 Thioredoxin-like domain 121 253 2.5E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS24090 c16b752ab7dc4b2351e707433660a1ea 257 SUPERFAMILY SSF52833 96 252 4.49E-32 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS24090 c16b752ab7dc4b2351e707433660a1ea 257 SUPERFAMILY SSF54423 30 87 1.26E-10 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL504_RS24090 c16b752ab7dc4b2351e707433660a1ea 257 Gene3D G3DSA:3.10.450.70 34 95 1.6E-11 T 28-03-2018 AL504_RS21615 b69cbc225cf2da520c61098a95be4a88 214 PIRSF PIRSF006324 1 209 2.1E-47 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS21615 b69cbc225cf2da520c61098a95be4a88 214 Pfam PF01810 LysE type translocator 16 207 3.8E-30 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS03690 19dc057de974f2b39723a5923d77075f 212 PIRSF PIRSF006324 1 207 3.4E-47 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS03690 19dc057de974f2b39723a5923d77075f 212 Pfam PF01810 LysE type translocator 17 204 1.1E-28 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS09970 a09a9645933b72bd1788be89d09ab127 509 SUPERFAMILY SSF75304 8 498 2.49E-101 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS09970 a09a9645933b72bd1788be89d09ab127 509 Gene3D G3DSA:3.90.1300.10 6 508 9.7E-103 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS09970 a09a9645933b72bd1788be89d09ab127 509 ProSitePatterns PS00571 Amidases signature. 168 199 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS09970 a09a9645933b72bd1788be89d09ab127 509 Pfam PF01425 Amidase 32 489 1.8E-72 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 SUPERFAMILY SSF52777 205 428 2.0E-80 T 28-03-2018 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 204 428 4.9E-83 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 Pfam PF00364 Biotin-requiring enzyme 5 76 1.5E-13 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 Gene3D G3DSA:3.30.559.10 199 428 8.3E-92 T 28-03-2018 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 SUPERFAMILY SSF47005 146 188 5.1E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 Pfam PF02817 e3 binding domain 151 185 3.9E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 Gene3D G3DSA:2.40.50.100 5 78 2.4E-10 T 28-03-2018 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 Gene3D G3DSA:4.10.320.10 141 198 1.2E-16 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 5 428 1.5E-143 T 28-03-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 AL504_RS21925 c9e356593ebaab8f1587270796e98721 428 SUPERFAMILY SSF51230 4 95 1.22E-21 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS13965 93e221352988aaea7c91f853a3c9a20a 311 Pfam PF00535 Glycosyl transferase family 2 9 116 1.1E-26 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS13965 93e221352988aaea7c91f853a3c9a20a 311 Gene3D G3DSA:3.90.550.10 3 284 1.7E-34 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS13965 93e221352988aaea7c91f853a3c9a20a 311 SUPERFAMILY SSF53448 6 259 2.81E-40 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS13060 93b7cb097949f66a0aa933d40d2a7ad9 319 SUPERFAMILY SSF53850 82 273 2.17E-12 T 28-03-2018 AL504_RS13060 93b7cb097949f66a0aa933d40d2a7ad9 319 PIRSF PIRSF017082 1 318 5.2E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS13060 93b7cb097949f66a0aa933d40d2a7ad9 319 Gene3D G3DSA:3.40.190.10 117 228 3.3E-13 T 28-03-2018 AL504_RS13060 93b7cb097949f66a0aa933d40d2a7ad9 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 42 314 2.5E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11345 61093f820aa49353ea8a321d1d2f749d 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 28-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL504_RS11345 61093f820aa49353ea8a321d1d2f749d 249 PIRSF PIRSF000090 1 249 3.5E-87 T 28-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL504_RS11345 61093f820aa49353ea8a321d1d2f749d 249 SMART SM00893 23 211 7.7E-70 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS11345 61093f820aa49353ea8a321d1d2f749d 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 5.0E-48 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS11345 61093f820aa49353ea8a321d1d2f749d 249 SUPERFAMILY SSF52402 1 242 5.79E-88 T 28-03-2018 AL504_RS11345 61093f820aa49353ea8a321d1d2f749d 249 Gene3D G3DSA:3.40.50.620 1 248 1.6E-91 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS16670 e7551ee94314c9f7ed9184ec3a67b7aa 329 SUPERFAMILY SSF53850 92 289 1.81E-7 T 28-03-2018 AL504_RS16670 e7551ee94314c9f7ed9184ec3a67b7aa 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 323 1.0E-60 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16670 e7551ee94314c9f7ed9184ec3a67b7aa 329 PIRSF PIRSF017082 1 319 7.9E-63 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16670 e7551ee94314c9f7ed9184ec3a67b7aa 329 Gene3D G3DSA:3.40.190.10 135 299 1.7E-7 T 28-03-2018 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 SMART SM00493 256 327 1.7E-18 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Hamap MF_00974 DNA primase [dnaG]. 1 679 27.168 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 SUPERFAMILY SSF56731 119 419 3.14E-100 T 28-03-2018 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Gene3D G3DSA:3.90.980.10 110 237 4.0E-39 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 248 7.2E-36 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Pfam PF13662 Toprim domain 257 322 6.8E-16 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Gene3D G3DSA:1.10.860.10 546 681 2.0E-17 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Gene3D G3DSA:3.40.1360.20 252 366 4.9E-31 T 28-03-2018 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Pfam PF08278 DNA primase DnaG DnaB-binding 556 677 9.0E-14 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 TIGRFAM TIGR01391 dnaG: DNA primase 2 414 4.3E-137 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Pfam PF01807 CHC2 zinc finger 3 97 3.6E-37 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 SUPERFAMILY SSF57783 2 97 4.42E-36 T 28-03-2018 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Pfam PF10410 DnaB-helicase binding domain of primase 366 421 2.2E-9 T 28-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 SUPERFAMILY SSF117023 552 680 3.4E-13 T 28-03-2018 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 SMART SM00400 33 87 4.2E-34 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Gene3D G3DSA:1.20.50.20 367 418 1.6E-16 T 28-03-2018 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 SMART SM00766 554 678 2.5E-20 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL504_RS09070 c21eb1d76101c555bf9493a9dbbfb183 690 Gene3D G3DSA:3.90.580.10 1 100 4.2E-34 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL504_RS20310 b6cc7a49fcfb752e0fc54847990bd724 299 Gene3D G3DSA:3.90.550.10 2 266 1.7E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20310 b6cc7a49fcfb752e0fc54847990bd724 299 SUPERFAMILY SSF53448 4 272 7.67E-61 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20310 b6cc7a49fcfb752e0fc54847990bd724 299 Pfam PF00535 Glycosyl transferase family 2 6 192 5.0E-27 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 SUPERFAMILY SSF51905 314 395 1.62E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 SUPERFAMILY SSF51905 1 171 1.62E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 Pfam PF01494 FAD binding domain 319 389 1.9E-13 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 Gene3D G3DSA:3.50.50.60 4 399 2.8E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 38 3.1E-5 T 28-03-2018 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.3E-17 T 28-03-2018 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 323 338 2.3E-17 T 28-03-2018 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 374 2.3E-17 T 28-03-2018 AL504_RS24455 283967cd3ae9d567ec409543fcd80dba 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 354 2.3E-17 T 28-03-2018 AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 Pfam PF00501 AMP-binding enzyme 26 443 5.4E-91 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 Gene3D G3DSA:2.30.38.10 361 437 3.7E-19 T 28-03-2018 AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 Gene3D G3DSA:3.40.50.980 47 190 2.1E-38 T 28-03-2018 AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 Gene3D G3DSA:3.40.50.980 191 348 6.5E-34 T 28-03-2018 AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 Gene3D G3DSA:3.30.300.30 438 544 2.5E-27 T 28-03-2018 AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 SUPERFAMILY SSF56801 12 536 1.7E-139 T 28-03-2018 AL504_RS07855 27f1ea01ec7e9b195a09343b858e02a4 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 526 3.5E-20 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS15015 677ccd3a023c7324ac3592c28b55eda9 347 Pfam PF01032 FecCD transport family 30 343 1.6E-84 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS15015 677ccd3a023c7324ac3592c28b55eda9 347 PRINTS PR00173 Glutamate-aspartate symporter signature 19 39 3.7E-5 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS15015 677ccd3a023c7324ac3592c28b55eda9 347 PRINTS PR00173 Glutamate-aspartate symporter signature 321 347 3.7E-5 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS15015 677ccd3a023c7324ac3592c28b55eda9 347 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 3.7E-5 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS15015 677ccd3a023c7324ac3592c28b55eda9 347 SUPERFAMILY SSF81345 11 343 1.29E-78 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS15015 677ccd3a023c7324ac3592c28b55eda9 347 Gene3D G3DSA:1.10.3470.10 14 346 1.3E-70 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 123 143 2.7E-5 T 28-03-2018 AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 32 56 2.7E-5 T 28-03-2018 AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 410 429 2.7E-5 T 28-03-2018 AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 177 2.7E-5 T 28-03-2018 AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 Gene3D G3DSA:1.20.1250.20 269 460 2.1E-25 T 28-03-2018 AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 SUPERFAMILY SSF103473 15 211 7.85E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 SUPERFAMILY SSF103473 258 455 7.85E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 Pfam PF07690 Major Facilitator Superfamily 35 419 1.6E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS17750 ef8d23e52444346418cd7c20330c1b0a 463 Gene3D G3DSA:1.20.1250.20 24 213 8.4E-26 T 28-03-2018 AL504_RS01910 605ab2f97653ac87290f82fa3742f300 238 Gene3D G3DSA:1.25.40.10 4 131 3.3E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS01910 605ab2f97653ac87290f82fa3742f300 238 SUPERFAMILY SSF48452 25 92 1.21E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS07395 a36b77664afffa09fe1099aa63a8c9f9 264 SUPERFAMILY SSF52096 8 259 3.02E-61 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS07395 a36b77664afffa09fe1099aa63a8c9f9 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 258 6.0E-29 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS07395 a36b77664afffa09fe1099aa63a8c9f9 264 Gene3D G3DSA:3.90.226.10 4 264 3.8E-59 T 28-03-2018 AL504_RS11355 9307d72638568903aff4327589639f9d 386 SUPERFAMILY SSF53955 65 381 1.83E-75 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS11355 9307d72638568903aff4327589639f9d 386 Gene3D G3DSA:1.10.8.350 141 250 1.6E-31 T 28-03-2018 AL504_RS11355 9307d72638568903aff4327589639f9d 386 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 79 380 9.6E-108 T 28-03-2018 IPR011757 Lytic transglycosylase MltB AL504_RS11355 9307d72638568903aff4327589639f9d 386 Gene3D G3DSA:1.10.530.10 255 385 1.0E-26 T 28-03-2018 AL504_RS11355 9307d72638568903aff4327589639f9d 386 Pfam PF13406 Transglycosylase SLT domain 75 377 2.6E-82 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 Gene3D G3DSA:1.20.1250.20 25 213 2.6E-25 T 28-03-2018 AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 Pfam PF07690 Major Facilitator Superfamily 32 431 7.1E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 1.0E-5 T 28-03-2018 AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 1.0E-5 T 28-03-2018 AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 1.0E-5 T 28-03-2018 AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 SUPERFAMILY SSF103473 13 210 2.62E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 Gene3D G3DSA:1.20.1250.20 271 484 5.7E-16 T 28-03-2018 AL504_RS22030 f8fd8042b21bbec382cbcc374f969dc4 484 SUPERFAMILY SSF103473 218 478 3.14E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17285 42705af33ae59624029e98863360cc11 277 Gene3D G3DSA:3.40.190.10 31 127 1.4E-19 T 28-03-2018 AL504_RS17285 42705af33ae59624029e98863360cc11 277 Gene3D G3DSA:3.40.190.10 128 269 1.0E-37 T 28-03-2018 AL504_RS17285 42705af33ae59624029e98863360cc11 277 PIRSF PIRSF002854 1 268 1.1E-74 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS17285 42705af33ae59624029e98863360cc11 277 SUPERFAMILY SSF53850 33 267 9.88E-63 T 28-03-2018 AL504_RS17285 42705af33ae59624029e98863360cc11 277 Pfam PF03180 NLPA lipoprotein 33 265 9.3E-75 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS08570 ba72924788e835944b35341457d869d7 220 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 6 216 39.968 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL504_RS08570 ba72924788e835944b35341457d869d7 220 Gene3D G3DSA:3.20.20.70 5 218 5.0E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS08570 ba72924788e835944b35341457d869d7 220 SUPERFAMILY SSF51366 6 214 3.61E-56 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS08570 ba72924788e835944b35341457d869d7 220 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 8 211 5.1E-43 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL504_RS30355 4c3138870c89d8554495e0810adc1d95 326 Pfam PF04773 FecR protein 122 212 3.6E-18 T 28-03-2018 IPR006860 FecR protein AL504_RS30355 4c3138870c89d8554495e0810adc1d95 326 Pfam PF16220 Domain of unknown function (DUF4880) 3 42 1.7E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS30355 4c3138870c89d8554495e0810adc1d95 326 PIRSF PIRSF018266 1 324 6.0E-79 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 SUPERFAMILY SSF55920 6 255 7.33E-94 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 Pfam PF00557 Metallopeptidase family M24 15 243 2.0E-55 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 Hamap MF_01974 Methionine aminopeptidase [map]. 5 252 40.632 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 6 251 1.0E-94 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 Gene3D G3DSA:3.90.230.10 1 259 1.8E-86 T 28-03-2018 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 7.8E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 7.8E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 7.8E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS01800 034758f1f1ccb62014f76d40cf322922 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 7.8E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL504_RS18660 963ab5a488be376314dc276780b02b82 127 Pfam PF13411 MerR HTH family regulatory protein 7 70 8.8E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS18660 963ab5a488be376314dc276780b02b82 127 Gene3D G3DSA:1.10.1660.10 59 127 3.6E-11 T 28-03-2018 AL504_RS18660 963ab5a488be376314dc276780b02b82 127 SUPERFAMILY SSF46955 6 121 3.66E-24 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS18660 963ab5a488be376314dc276780b02b82 127 Gene3D G3DSA:1.10.1660.10 1 58 6.5E-19 T 28-03-2018 AL504_RS18660 963ab5a488be376314dc276780b02b82 127 SMART SM00422 6 73 1.8E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 SUPERFAMILY SSF50447 207 303 1.96E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.3E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Gene3D G3DSA:2.40.30.10 302 395 1.5E-32 T 28-03-2018 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Gene3D G3DSA:2.40.30.10 208 301 7.4E-31 T 28-03-2018 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.3E-25 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 4.1E-15 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 2.0E-226 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Gene3D G3DSA:3.40.50.300 74 205 1.5E-30 T 28-03-2018 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.217 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.7E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Gene3D G3DSA:3.40.50.300 2 73 1.5E-10 T 28-03-2018 AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.5E-32 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 SUPERFAMILY SSF52540 5 221 1.35E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19595 763a9892f101833ee3b3850a4dbc8d87 396 SUPERFAMILY SSF50465 304 396 9.5E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL504_RS05555 3a9b00040121db3c8187f7b07ed33842 351 Gene3D G3DSA:3.20.20.70 1 351 1.7E-120 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS05555 3a9b00040121db3c8187f7b07ed33842 351 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 1.3E-77 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL504_RS05555 3a9b00040121db3c8187f7b07ed33842 351 SUPERFAMILY SSF51395 1 349 1.3E-116 T 28-03-2018 AL504_RS18450 1f7d4a0e9703a33f38025b9b22bfb186 323 SUPERFAMILY SSF161098 92 305 1.96E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18450 1f7d4a0e9703a33f38025b9b22bfb186 323 Gene3D G3DSA:1.10.3720.10 3 308 7.0E-42 T 28-03-2018 AL504_RS18450 1f7d4a0e9703a33f38025b9b22bfb186 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 1.5E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 SUPERFAMILY SSF52210 128 291 2.62E-51 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 2.5E-33 T 28-03-2018 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 2.5E-33 T 28-03-2018 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 2.5E-33 T 28-03-2018 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 2.5E-33 T 28-03-2018 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 Gene3D G3DSA:3.40.50.261 125 293 1.0E-50 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 293 40.427 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 PIRSF PIRSF001553 1 293 1.2E-115 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 Gene3D G3DSA:3.40.50.720 1 124 3.4E-39 T 28-03-2018 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 SMART SM00881 4 103 3.0E-29 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 SUPERFAMILY SSF51735 1 127 8.45E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 Pfam PF02629 CoA binding domain 6 102 2.4E-23 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 293 1.8E-126 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS10690 adc28f8dd4bb59e4ee39bd92f79ecc76 293 Pfam PF00549 CoA-ligase 156 271 7.2E-15 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 SMART SM00490 259 340 6.0E-31 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 Pfam PF00271 Helicase conserved C-terminal domain 235 340 5.9E-27 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 Gene3D G3DSA:3.40.50.300 8 221 4.6E-59 T 28-03-2018 AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 SMART SM00487 20 222 1.4E-57 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 SUPERFAMILY SSF52540 73 361 5.05E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 Gene3D G3DSA:3.40.50.300 222 545 5.3E-45 T 28-03-2018 AL504_RS20735 859255cf082d60d44cec404e742ce6a3 600 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.7E-48 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS10520 4d041d25a8230264ae1827cbf3d5a641 367 SUPERFAMILY SSF56176 7 177 6.07E-35 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS10520 4d041d25a8230264ae1827cbf3d5a641 367 Gene3D G3DSA:1.10.45.10 330 363 1.1E-5 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL504_RS10520 4d041d25a8230264ae1827cbf3d5a641 367 Gene3D G3DSA:3.30.465.10 55 176 3.0E-30 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS10520 4d041d25a8230264ae1827cbf3d5a641 367 SUPERFAMILY SSF55103 199 365 9.97E-16 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS10520 4d041d25a8230264ae1827cbf3d5a641 367 Pfam PF01565 FAD binding domain 9 139 1.1E-22 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS20685 c4436e5a2b4adbb34a7ed276776b6591 332 PIRSF PIRSF017082 4 332 1.3E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS20685 c4436e5a2b4adbb34a7ed276776b6591 332 Gene3D G3DSA:3.40.190.10 41 299 3.1E-11 T 28-03-2018 AL504_RS20685 c4436e5a2b4adbb34a7ed276776b6591 332 SUPERFAMILY SSF53850 120 290 2.29E-10 T 28-03-2018 AL504_RS20685 c4436e5a2b4adbb34a7ed276776b6591 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 328 1.3E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21445 c8836cc1397236689633218c9505077d 378 SUPERFAMILY SSF82051 2 158 2.22E-55 T 28-03-2018 IPR006169 GTP1/OBG domain AL504_RS21445 c8836cc1397236689633218c9505077d 378 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 Pfam PF01926 50S ribosome-binding GTPase 161 289 7.4E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 PIRSF PIRSF002401 1 372 1.7E-132 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type AL504_RS21445 c8836cc1397236689633218c9505077d 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 5.1E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 5.1E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 5.1E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 5.1E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 SUPERFAMILY SSF52540 151 343 6.96E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21445 c8836cc1397236689633218c9505077d 378 Pfam PF01018 GTP1/OBG 4 158 3.9E-58 T 28-03-2018 IPR006169 GTP1/OBG domain AL504_RS21445 c8836cc1397236689633218c9505077d 378 Gene3D G3DSA:3.40.50.300 159 347 5.0E-33 T 28-03-2018 AL504_RS21445 c8836cc1397236689633218c9505077d 378 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 335 1.4E-136 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 Hamap MF_01454 GTPase Obg [obg]. 2 336 46.771 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL504_RS21445 c8836cc1397236689633218c9505077d 378 Gene3D G3DSA:2.70.210.12 2 156 2.7E-54 T 28-03-2018 IPR006169 GTP1/OBG domain AL504_RS18970 46ea90ebf02b09eac58e61b6b100c833 319 SUPERFAMILY SSF53850 26 318 6.08E-72 T 28-03-2018 AL504_RS18970 46ea90ebf02b09eac58e61b6b100c833 319 Gene3D G3DSA:3.40.190.10 160 318 8.5E-39 T 28-03-2018 AL504_RS18970 46ea90ebf02b09eac58e61b6b100c833 319 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 316 1.1E-101 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL504_RS18970 46ea90ebf02b09eac58e61b6b100c833 319 Gene3D G3DSA:3.40.190.10 23 155 2.7E-24 T 28-03-2018 AL504_RS18970 46ea90ebf02b09eac58e61b6b100c833 319 Pfam PF16868 NMT1-like family 31 316 3.4E-88 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL504_RS29885 1623d4ada39711cf1d2ca3da25408fef 305 Gene3D G3DSA:3.40.50.2300 4 115 3.0E-14 T 28-03-2018 AL504_RS29885 1623d4ada39711cf1d2ca3da25408fef 305 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 49 256 6.8E-9 T 28-03-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 AL504_RS29885 1623d4ada39711cf1d2ca3da25408fef 305 Gene3D G3DSA:3.40.50.2300 116 296 3.8E-8 T 28-03-2018 AL504_RS03290 5c0008e7eac01e124a8c536ab9b56e9b 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 89 189 2.0E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03290 5c0008e7eac01e124a8c536ab9b56e9b 740 SUPERFAMILY SSF56935 48 739 6.28E-123 T 28-03-2018 AL504_RS03290 5c0008e7eac01e124a8c536ab9b56e9b 740 Gene3D G3DSA:2.170.130.10 46 198 5.2E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03290 5c0008e7eac01e124a8c536ab9b56e9b 740 Gene3D G3DSA:2.40.170.20 199 740 1.3E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03290 5c0008e7eac01e124a8c536ab9b56e9b 740 Pfam PF00593 TonB dependent receptor 278 738 1.3E-51 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03290 5c0008e7eac01e124a8c536ab9b56e9b 740 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 91 739 7.9E-102 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS15820 16cf931ad3d2fb3d6a5e96d5b9697f22 635 SMART SM00955 235 516 7.6E-60 T 28-03-2018 AL504_RS15820 16cf931ad3d2fb3d6a5e96d5b9697f22 635 Pfam PF00773 RNB domain 238 470 4.8E-35 T 28-03-2018 AL504_RS15820 16cf931ad3d2fb3d6a5e96d5b9697f22 635 Pfam PF00773 RNB domain 475 514 6.7E-9 T 28-03-2018 AL504_RS15820 16cf931ad3d2fb3d6a5e96d5b9697f22 635 SUPERFAMILY SSF50249 228 566 8.57E-73 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS01675 ea4abb3501c48b8d5b6b781b432f7c27 148 SUPERFAMILY SSF52402 1 146 6.58E-37 T 28-03-2018 AL504_RS01675 ea4abb3501c48b8d5b6b781b432f7c27 148 Gene3D G3DSA:3.40.50.620 1 148 9.7E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS01675 ea4abb3501c48b8d5b6b781b432f7c27 148 PRINTS PR01438 Universal stress protein signature 123 145 3.9E-16 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS01675 ea4abb3501c48b8d5b6b781b432f7c27 148 PRINTS PR01438 Universal stress protein signature 105 117 3.9E-16 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS01675 ea4abb3501c48b8d5b6b781b432f7c27 148 PRINTS PR01438 Universal stress protein signature 2 20 3.9E-16 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS01675 ea4abb3501c48b8d5b6b781b432f7c27 148 Pfam PF00582 Universal stress protein family 1 145 6.2E-30 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS19220 dbc0c352a5255d3c2532aa443116c297 111 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 90 2.8E-22 T 28-03-2018 AL504_RS19220 dbc0c352a5255d3c2532aa443116c297 111 Gene3D G3DSA:3.10.20.30 8 100 2.1E-5 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS19220 dbc0c352a5255d3c2532aa443116c297 111 SUPERFAMILY SSF54292 15 91 1.37E-17 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 Gene3D G3DSA:3.40.640.10 177 302 7.3E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 PIRSF PIRSF000521 4 130 1.5E-5 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 PIRSF PIRSF000521 121 161 0.22 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 PIRSF PIRSF000521 174 417 4.2E-31 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 Gene3D G3DSA:3.90.1150.10 303 421 1.7E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 Pfam PF00202 Aminotransferase class-III 20 412 7.0E-77 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 Gene3D G3DSA:3.90.1150.10 4 161 1.5E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 SUPERFAMILY SSF53383 8 414 1.1E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 420 2.7E-143 T 28-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AL504_RS09265 6a5db5cd90c2bc51ab15c2a29e577e94 435 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 4 415 1.1E-195 T 28-03-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AL504_RS18265 096c49df3538116569ff7e0f83a3b639 558 Gene3D G3DSA:3.40.50.980 204 365 1.7E-26 T 28-03-2018 AL504_RS18265 096c49df3538116569ff7e0f83a3b639 558 Gene3D G3DSA:3.30.300.30 455 558 3.8E-27 T 28-03-2018 AL504_RS18265 096c49df3538116569ff7e0f83a3b639 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 542 1.4E-20 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS18265 096c49df3538116569ff7e0f83a3b639 558 SUPERFAMILY SSF56801 24 554 7.59E-129 T 28-03-2018 AL504_RS18265 096c49df3538116569ff7e0f83a3b639 558 Pfam PF00501 AMP-binding enzyme 31 458 2.6E-79 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS18265 096c49df3538116569ff7e0f83a3b639 558 Gene3D G3DSA:3.40.50.980 22 203 6.5E-33 T 28-03-2018 AL504_RS18265 096c49df3538116569ff7e0f83a3b639 558 Gene3D G3DSA:2.30.38.10 377 452 1.1E-17 T 28-03-2018 AL504_RS17060 4301c37a9094eb082f691db7d8351565 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17060 4301c37a9094eb082f691db7d8351565 308 Gene3D G3DSA:3.40.190.10 95 179 6.7E-11 T 28-03-2018 AL504_RS17060 4301c37a9094eb082f691db7d8351565 308 Gene3D G3DSA:3.40.190.10 180 261 1.9E-12 T 28-03-2018 AL504_RS17060 4301c37a9094eb082f691db7d8351565 308 Pfam PF03466 LysR substrate binding domain 93 293 4.8E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS17060 4301c37a9094eb082f691db7d8351565 308 SUPERFAMILY SSF46785 5 87 3.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17060 4301c37a9094eb082f691db7d8351565 308 Gene3D G3DSA:1.10.10.10 4 94 5.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17060 4301c37a9094eb082f691db7d8351565 308 SUPERFAMILY SSF53850 94 296 5.29E-30 T 28-03-2018 AL504_RS03170 e56f78d89b491db4dd3acbd9b9257306 170 Gene3D G3DSA:1.10.10.10 73 165 1.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03170 e56f78d89b491db4dd3acbd9b9257306 170 Pfam PF04542 Sigma-70 region 2 14 78 1.4E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03170 e56f78d89b491db4dd3acbd9b9257306 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 160 5.0E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03170 e56f78d89b491db4dd3acbd9b9257306 170 SUPERFAMILY SSF88659 104 162 3.27E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03170 e56f78d89b491db4dd3acbd9b9257306 170 Pfam PF08281 Sigma-70, region 4 110 162 1.6E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03170 e56f78d89b491db4dd3acbd9b9257306 170 Gene3D G3DSA:1.10.1740.10 1 72 4.2E-14 T 28-03-2018 AL504_RS03170 e56f78d89b491db4dd3acbd9b9257306 170 SUPERFAMILY SSF88946 9 99 3.57E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03905 64a83c6c95827c337dc29ecd4d3aee29 481 Pfam PF07364 Metallopeptidase family M81 2 288 9.1E-90 T 28-03-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal AL504_RS03905 64a83c6c95827c337dc29ecd4d3aee29 481 Pfam PF07171 MlrC C-terminus 297 471 6.3E-51 T 28-03-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal AL504_RS03905 64a83c6c95827c337dc29ecd4d3aee29 481 PIRSF PIRSF012702 1 481 2.7E-168 T 28-03-2018 IPR009197 Microcystin LR degradation protein MlrC AL504_RS04690 ff224d55f089790cf3a8b6b11747404b 687 Gene3D G3DSA:3.40.50.2000 480 652 8.9E-28 T 28-03-2018 AL504_RS04690 ff224d55f089790cf3a8b6b11747404b 687 Gene3D G3DSA:1.25.40.10 18 221 4.6E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04690 ff224d55f089790cf3a8b6b11747404b 687 Pfam PF00534 Glycosyl transferases group 1 485 626 1.3E-20 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS04690 ff224d55f089790cf3a8b6b11747404b 687 SUPERFAMILY SSF53756 248 298 2.35E-47 T 28-03-2018 AL504_RS04690 ff224d55f089790cf3a8b6b11747404b 687 SUPERFAMILY SSF53756 348 663 2.35E-47 T 28-03-2018 AL504_RS04690 ff224d55f089790cf3a8b6b11747404b 687 Gene3D G3DSA:3.40.50.2000 241 479 1.1E-8 T 28-03-2018 AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 7 23 1.4E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 237 255 1.4E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 1.4E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 66 1.4E-7 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 Gene3D G3DSA:3.40.50.2300 3 165 1.6E-28 T 28-03-2018 AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 SUPERFAMILY SSF53822 6 375 1.78E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 Gene3D G3DSA:3.40.50.2300 166 336 5.8E-14 T 28-03-2018 AL504_RS17005 3475ea18eeb21ae3a995c3c40d556548 384 Pfam PF13433 Periplasmic binding protein domain 7 370 3.3E-144 T 28-03-2018 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 177 3.8E-6 T 28-03-2018 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 91 113 3.8E-6 T 28-03-2018 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 31 55 3.8E-6 T 28-03-2018 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 415 434 3.8E-6 T 28-03-2018 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 SUPERFAMILY SSF103473 262 469 3.27E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 SUPERFAMILY SSF103473 9 212 3.27E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 Gene3D G3DSA:1.20.1250.20 24 218 3.5E-28 T 28-03-2018 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 29 433 4.3E-70 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 Gene3D G3DSA:1.20.1250.20 266 470 3.9E-24 T 28-03-2018 AL504_RS26805 ec25c6ff4508fe3a826ef7b62b27ec4b 470 Pfam PF07690 Major Facilitator Superfamily 32 424 3.1E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS20545 4a7314872971c1e535d55edde5a9be55 179 SUPERFAMILY SSF56235 3 177 3.46E-58 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS20545 4a7314872971c1e535d55edde5a9be55 179 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 2.9E-84 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL504_RS20545 4a7314872971c1e535d55edde5a9be55 179 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 41.029 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL504_RS20545 4a7314872971c1e535d55edde5a9be55 179 Pfam PF00227 Proteasome subunit 5 175 2.9E-21 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL504_RS20545 4a7314872971c1e535d55edde5a9be55 179 Gene3D G3DSA:3.60.20.10 7 178 3.3E-29 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS20545 4a7314872971c1e535d55edde5a9be55 179 PIRSF PIRSF039093 1 179 1.1E-85 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL504_RS31370 f044fa85c8a908a8ca5b055fe2116c3c 274 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 35 262 1.2E-53 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL504_RS31370 f044fa85c8a908a8ca5b055fe2116c3c 274 Pfam PF01168 Alanine racemase, N-terminal domain 36 262 6.9E-23 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS31370 f044fa85c8a908a8ca5b055fe2116c3c 274 Gene3D G3DSA:3.20.20.10 28 269 5.7E-64 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS31370 f044fa85c8a908a8ca5b055fe2116c3c 274 SUPERFAMILY SSF51419 30 260 2.22E-75 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS31370 f044fa85c8a908a8ca5b055fe2116c3c 274 PIRSF PIRSF004848 27 268 2.1E-68 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 Gene3D G3DSA:3.40.640.10 129 380 1.9E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 SMART SM00345 10 69 3.1E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 4.7E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 SUPERFAMILY SSF46785 2 73 6.67E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 Pfam PF00155 Aminotransferase class I and II 128 464 1.2E-28 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 SUPERFAMILY SSF53383 116 476 6.19E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 Gene3D G3DSA:3.90.1150.10 381 478 4.7E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS10820 98cd8028eb9ba20b1378d0c99164ab92 479 Gene3D G3DSA:1.10.10.10 1 82 3.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21670 49ee6f628864e76528d8b4979fbee54d 179 Pfam PF03079 ARD/ARD' family 23 164 6.5E-32 T 28-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 AL504_RS21670 49ee6f628864e76528d8b4979fbee54d 179 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 171 38.686 T 28-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 AL504_RS21670 49ee6f628864e76528d8b4979fbee54d 179 Gene3D G3DSA:2.60.120.10 2 156 1.4E-39 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS21670 49ee6f628864e76528d8b4979fbee54d 179 SUPERFAMILY SSF51182 17 176 2.16E-40 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS04885 7abb9a15dddd8333e28bf7b0b327c142 197 SUPERFAMILY SSF54001 56 187 1.47E-40 T 28-03-2018 AL504_RS04885 7abb9a15dddd8333e28bf7b0b327c142 197 Pfam PF00877 NlpC/P60 family 75 183 2.0E-31 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL504_RS04885 7abb9a15dddd8333e28bf7b0b327c142 197 Gene3D G3DSA:3.90.1720.10 53 196 3.3E-42 T 28-03-2018 AL504_RS28465 4227733395941f9c0fdaea0e84ea4684 181 Gene3D G3DSA:3.90.79.10 28 181 4.5E-21 T 28-03-2018 AL504_RS28465 4227733395941f9c0fdaea0e84ea4684 181 PIRSF PIRSF037599 28 180 1.7E-51 T 28-03-2018 IPR033715 GDP-mannose mannosyl hydrolase GO:0008727 AL504_RS28465 4227733395941f9c0fdaea0e84ea4684 181 SUPERFAMILY SSF55811 33 170 1.9E-24 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS28465 4227733395941f9c0fdaea0e84ea4684 181 Pfam PF00293 NUDIX domain 45 169 2.7E-13 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 Gene3D G3DSA:3.40.50.2300 1 132 2.0E-30 T 28-03-2018 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 Gene3D G3DSA:3.40.50.300 136 310 3.4E-27 T 28-03-2018 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 Pfam PF00072 Response regulator receiver domain 4 112 7.1E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 SUPERFAMILY SSF52172 1 183 2.85E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 Gene3D G3DSA:1.10.10.60 387 445 1.3E-17 T 28-03-2018 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 Pfam PF02954 Bacterial regulatory protein, Fis family 402 442 9.5E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 Gene3D G3DSA:1.10.8.60 312 380 7.4E-22 T 28-03-2018 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 SUPERFAMILY SSF52540 140 377 4.33E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 Pfam PF00158 Sigma-54 interaction domain 140 305 1.8E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 SUPERFAMILY SSF46689 349 444 1.51E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 SMART SM00448 2 112 4.2E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 SMART SM00382 159 302 1.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 7.6E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS23660 bd9dbf522c244b8586e8565c8a992ddb 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 7.6E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 Gene3D G3DSA:3.40.50.300 4 248 2.5E-50 T 28-03-2018 AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 Pfam PF00005 ABC transporter 24 173 2.2E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 Pfam PF00005 ABC transporter 276 430 3.1E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 SUPERFAMILY SSF52540 6 234 1.64E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 Gene3D G3DSA:3.40.50.300 264 503 7.8E-38 T 28-03-2018 AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 SMART SM00382 32 221 1.2E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 SMART SM00382 284 481 9.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS01430 fdfdff31e1b39f919ad2b91fcbdee7bf 507 SUPERFAMILY SSF52540 273 489 6.93E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS03205 6752e8b05e07aca5d3db2331f18b4e40 338 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 25 310 1.1E-51 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AL504_RS03205 6752e8b05e07aca5d3db2331f18b4e40 338 Gene3D G3DSA:3.60.130.10 5 313 4.0E-73 T 28-03-2018 AL504_RS03205 6752e8b05e07aca5d3db2331f18b4e40 338 SUPERFAMILY SSF51197 7 312 5.04E-90 T 28-03-2018 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 Gene3D G3DSA:2.102.10.10 48 213 4.4E-39 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 Gene3D G3DSA:1.20.5.510 19 47 5.8E-9 T 28-03-2018 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 SUPERFAMILY SSF50022 44 211 5.63E-39 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 24 206 1.2E-61 T 28-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 Pfam PF00355 Rieske [2Fe-2S] domain 68 193 3.9E-12 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 PRINTS PR00162 Rieske 2Fe-2S subunit signature 165 177 9.9E-7 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 PRINTS PR00162 Rieske 2Fe-2S subunit signature 178 190 9.9E-7 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL504_RS18070 d807a58fb6d9b88dca82b2806198ec92 213 PRINTS PR00162 Rieske 2Fe-2S subunit signature 133 144 9.9E-7 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL504_RS18975 e4e733851b7caf453f783026f5fa201b 674 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 139 588 4.1E-115 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS18975 e4e733851b7caf453f783026f5fa201b 674 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 29 664 1.1E-211 T 28-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein AL504_RS02240 c57cdea5f43e1e53525124f0310bc5cf 207 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 4 193 1.6E-46 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL504_RS02240 c57cdea5f43e1e53525124f0310bc5cf 207 SUPERFAMILY SSF52540 1 186 1.26E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS02240 c57cdea5f43e1e53525124f0310bc5cf 207 Hamap MF_00165 Thymidylate kinase [tmk]. 6 203 28.16 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL504_RS02240 c57cdea5f43e1e53525124f0310bc5cf 207 Pfam PF02223 Thymidylate kinase 10 193 4.5E-45 T 28-03-2018 AL504_RS02240 c57cdea5f43e1e53525124f0310bc5cf 207 Gene3D G3DSA:3.40.50.300 2 197 3.2E-49 T 28-03-2018 AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 Gene3D G3DSA:3.40.50.720 3 45 5.9E-9 T 28-03-2018 AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 Gene3D G3DSA:3.40.50.720 46 263 3.9E-67 T 28-03-2018 AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 Pfam PF00106 short chain dehydrogenase 12 198 1.3E-60 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 SUPERFAMILY SSF51735 6 262 1.99E-82 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16025 a187665eb78f2d17635b3898a3085ac1 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18335 f542bcdfcd510faeeead967008099765 345 Pfam PF00437 Type II/IV secretion system protein 27 294 6.4E-78 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL504_RS18335 f542bcdfcd510faeeead967008099765 345 Gene3D G3DSA:3.40.50.300 147 308 1.2E-10 T 28-03-2018 AL504_RS18335 f542bcdfcd510faeeead967008099765 345 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 314 1.3E-121 T 28-03-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 AL504_RS18335 f542bcdfcd510faeeead967008099765 345 SUPERFAMILY SSF52540 11 288 4.36E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18335 f542bcdfcd510faeeead967008099765 345 Gene3D G3DSA:3.30.450.90 19 123 9.7E-19 T 28-03-2018 AL504_RS17070 798ce4d5d0daab5930bd9674658c6397 298 Gene3D G3DSA:1.10.10.60 252 298 2.1E-9 T 28-03-2018 AL504_RS17070 798ce4d5d0daab5930bd9674658c6397 298 Pfam PF12833 Helix-turn-helix domain 222 298 6.7E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS17070 798ce4d5d0daab5930bd9674658c6397 298 Gene3D G3DSA:1.10.10.60 195 251 6.4E-9 T 28-03-2018 AL504_RS17070 798ce4d5d0daab5930bd9674658c6397 298 SMART SM00342 216 298 5.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS17070 798ce4d5d0daab5930bd9674658c6397 298 SUPERFAMILY SSF46689 253 298 1.88E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS17070 798ce4d5d0daab5930bd9674658c6397 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 253 294 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS09025 d32026f01bf8910557f85c3087ea2b64 324 Gene3D G3DSA:1.10.443.10 156 315 1.3E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS09025 d32026f01bf8910557f85c3087ea2b64 324 Gene3D G3DSA:1.10.150.130 52 155 9.4E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS09025 d32026f01bf8910557f85c3087ea2b64 324 SUPERFAMILY SSF56349 64 307 6.47E-53 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS09025 d32026f01bf8910557f85c3087ea2b64 324 Gene3D G3DSA:3.30.160.60 1 49 1.0E-7 T 28-03-2018 AL504_RS09025 d32026f01bf8910557f85c3087ea2b64 324 Pfam PF00589 Phage integrase family 155 308 7.4E-14 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 1.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 Pfam PF03466 LysR substrate binding domain 99 304 8.5E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 Gene3D G3DSA:1.10.10.10 14 95 3.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 SUPERFAMILY SSF53850 100 307 1.38E-39 T 28-03-2018 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 74 5.5E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 Gene3D G3DSA:3.40.190.10 100 188 9.4E-12 T 28-03-2018 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 Gene3D G3DSA:3.40.190.10 189 275 1.5E-18 T 28-03-2018 AL504_RS17615 f33503fac1e6905519d2da8f9f10a85b 314 SUPERFAMILY SSF46785 17 123 4.21E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01660 9bfdb66d6320c2d11ed51b7720366499 200 SUPERFAMILY SSF48498 88 176 7.42E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS01660 9bfdb66d6320c2d11ed51b7720366499 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 1.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01660 9bfdb66d6320c2d11ed51b7720366499 200 SUPERFAMILY SSF46689 6 84 3.64E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS01660 9bfdb66d6320c2d11ed51b7720366499 200 Gene3D G3DSA:1.10.357.10 2 199 2.4E-29 T 28-03-2018 AL504_RS01660 9bfdb66d6320c2d11ed51b7720366499 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS01660 9bfdb66d6320c2d11ed51b7720366499 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01660 9bfdb66d6320c2d11ed51b7720366499 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS21400 70b445f43237cda631bb74da1986dd36 251 Pfam PF00899 ThiF family 9 243 2.9E-66 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL504_RS21400 70b445f43237cda631bb74da1986dd36 251 Gene3D G3DSA:3.40.50.720 1 248 2.5E-74 T 28-03-2018 AL504_RS21400 70b445f43237cda631bb74da1986dd36 251 SUPERFAMILY SSF69572 2 248 4.32E-88 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL504_RS13620 b488cb6df69a83559932cc2a2241dc77 317 SUPERFAMILY SSF46689 263 311 8.96E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS13620 b488cb6df69a83559932cc2a2241dc77 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 305 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS13620 b488cb6df69a83559932cc2a2241dc77 317 Gene3D G3DSA:1.10.10.60 266 315 1.2E-9 T 28-03-2018 AL504_RS13620 b488cb6df69a83559932cc2a2241dc77 317 Gene3D G3DSA:1.10.10.60 206 265 2.0E-11 T 28-03-2018 AL504_RS13620 b488cb6df69a83559932cc2a2241dc77 317 Pfam PF12833 Helix-turn-helix domain 233 311 2.1E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS13620 b488cb6df69a83559932cc2a2241dc77 317 SUPERFAMILY SSF46689 211 261 1.21E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS13620 b488cb6df69a83559932cc2a2241dc77 317 SMART SM00342 227 309 1.3E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS08010 4a7307ac4542c559f66d159bc606319c 147 Gene3D G3DSA:3.10.129.10 5 146 8.5E-26 T 28-03-2018 AL504_RS08010 4a7307ac4542c559f66d159bc606319c 147 Pfam PF13279 Thioesterase-like superfamily 17 123 2.2E-9 T 28-03-2018 AL504_RS08010 4a7307ac4542c559f66d159bc606319c 147 SUPERFAMILY SSF54637 10 138 4.52E-31 T 28-03-2018 IPR029069 HotDog domain AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 SUPERFAMILY SSF58104 317 598 1.31E-69 T 28-03-2018 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 SUPERFAMILY SSF103190 89 171 3.53E-9 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 Gene3D G3DSA:1.10.287.1060 316 408 0.0059 T 28-03-2018 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 475 7.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 7.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 400 7.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 525 554 7.6E-45 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 564 2.4E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 SMART SM00283 350 597 3.2E-77 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 Gene3D G3DSA:3.30.450.20 33 156 1.4E-13 T 28-03-2018 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 Gene3D G3DSA:3.30.450.20 157 274 1.2E-16 T 28-03-2018 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 Gene3D G3DSA:1.10.287.950 409 601 9.5E-48 T 28-03-2018 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 SMART SM00304 295 349 6.1E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS24440 e60f0dead748f00e16bb8e845f0d47cd 614 Pfam PF02743 Cache domain 104 257 1.4E-16 T 28-03-2018 IPR033479 Double Cache domain 1 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 185 199 3.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 283 295 3.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 214 224 3.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 333 349 3.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 387 404 3.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 Gene3D G3DSA:3.30.70.1170 125 194 1.4E-16 T 28-03-2018 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 SUPERFAMILY SSF53335 100 404 6.0E-66 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 Gene3D G3DSA:3.40.50.150 195 413 2.0E-56 T 28-03-2018 AL504_RS30690 40d6322f960713d4af7e86a6851e8fa4 464 Pfam PF01189 16S rRNA methyltransferase RsmB/F 203 402 3.3E-46 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 Pfam PF00501 AMP-binding enzyme 11 416 2.1E-71 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 Gene3D G3DSA:3.40.50.980 2 178 1.2E-35 T 28-03-2018 AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 6.8E-14 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 Gene3D G3DSA:3.40.50.980 179 325 1.2E-29 T 28-03-2018 AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 SUPERFAMILY SSF56801 4 511 1.31E-120 T 28-03-2018 AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 Gene3D G3DSA:3.30.300.30 411 518 1.1E-22 T 28-03-2018 AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 Gene3D G3DSA:2.30.38.10 326 409 2.0E-19 T 28-03-2018 AL504_RS03125 eddd38e8eb43d2a6e53c77cd91f664dc 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 SMART SM00963 37 113 2.5E-16 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 Gene3D G3DSA:3.40.50.300 112 238 8.2E-8 T 28-03-2018 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 Gene3D G3DSA:1.20.120.140 9 111 4.3E-18 T 28-03-2018 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 SUPERFAMILY SSF52540 123 330 2.61E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 56 331 56.284 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 SMART SM00962 127 331 4.9E-102 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 56 329 1.2E-94 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 SMART SM00382 126 304 4.8E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 Gene3D G3DSA:1.20.120.140 239 332 8.5E-23 T 28-03-2018 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 Pfam PF02881 SRP54-type protein, helical bundle domain 47 107 1.0E-9 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 Pfam PF00448 SRP54-type protein, GTPase domain 128 330 2.7E-65 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS23375 02686e1482aa692572af3f6164bee12c 332 SUPERFAMILY SSF47364 32 106 6.8E-18 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL504_RS05725 be697688b59e35af7db190eb709bf4af 244 Pfam PF00005 ABC transporter 17 165 5.4E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05725 be697688b59e35af7db190eb709bf4af 244 SUPERFAMILY SSF52540 1 235 4.03E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05725 be697688b59e35af7db190eb709bf4af 244 SMART SM00382 26 221 2.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS05725 be697688b59e35af7db190eb709bf4af 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05725 be697688b59e35af7db190eb709bf4af 244 PIRSF PIRSF039085 1 241 2.1E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS05725 be697688b59e35af7db190eb709bf4af 244 Gene3D G3DSA:3.40.50.300 1 243 7.0E-76 T 28-03-2018 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 272 1.1E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 543 575 1.2E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 Gene3D G3DSA:3.40.50.300 3 308 1.6E-68 T 28-03-2018 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 Gene3D G3DSA:3.40.50.300 310 594 1.6E-71 T 28-03-2018 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 SUPERFAMILY SSF52540 313 563 2.5E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 SUPERFAMILY SSF52540 6 262 7.87E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 SMART SM00382 349 541 3.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 SMART SM00382 35 240 9.8E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 Pfam PF00005 ABC transporter 341 490 3.4E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS06755 fda54419aef66e61b0db5866902e5a3f 619 Pfam PF00005 ABC transporter 27 190 4.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 Pfam PF07702 UTRA domain 115 253 1.8E-37 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 90 1.6E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 SUPERFAMILY SSF64288 79 257 1.1E-42 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 SMART SM00345 31 90 1.1E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 1.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 1.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 SMART SM00866 111 253 1.4E-38 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 Gene3D G3DSA:1.10.10.10 20 92 4.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 Gene3D G3DSA:3.40.1410.10 98 258 2.3E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS11775 fe0ec34ca0598e953c42ac4caf1a5094 259 SUPERFAMILY SSF46785 25 102 7.94E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19010 e136b1147444ff8d3380a6ac44161c28 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 265 2.3E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19010 e136b1147444ff8d3380a6ac44161c28 275 Gene3D G3DSA:1.10.3720.10 69 268 9.0E-24 T 28-03-2018 AL504_RS19010 e136b1147444ff8d3380a6ac44161c28 275 SUPERFAMILY SSF161098 74 254 2.62E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 Pfam PF01266 FAD dependent oxidoreductase 21 363 1.0E-38 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 SUPERFAMILY SSF51905 103 317 4.21E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 SUPERFAMILY SSF51905 18 75 4.21E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 Gene3D G3DSA:3.50.50.60 3 229 9.9E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 93 105 4.4E-17 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 32 42 4.4E-17 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 386 398 4.4E-17 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 31 4.4E-17 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 356 4.4E-17 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 48 60 4.4E-17 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 Gene3D G3DSA:3.30.9.10 230 357 1.3E-30 T 28-03-2018 AL504_RS01445 572e6e8a4e66726c816f3665145d521c 573 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 419 544 6.1E-19 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS07910 45c5e1d7443f822f28ba43db5d263d03 319 SUPERFAMILY SSF53850 92 294 2.99E-27 T 28-03-2018 AL504_RS07910 45c5e1d7443f822f28ba43db5d263d03 319 Gene3D G3DSA:1.10.10.10 3 88 7.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07910 45c5e1d7443f822f28ba43db5d263d03 319 Gene3D G3DSA:3.40.190.10 89 224 6.1E-20 T 28-03-2018 AL504_RS07910 45c5e1d7443f822f28ba43db5d263d03 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.4E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07910 45c5e1d7443f822f28ba43db5d263d03 319 Pfam PF03466 LysR substrate binding domain 91 288 1.8E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07910 45c5e1d7443f822f28ba43db5d263d03 319 SUPERFAMILY SSF46785 4 114 4.01E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 2.6E-54 T 28-03-2018 AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 SUPERFAMILY SSF51735 6 254 6.2E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 Gene3D G3DSA:3.40.50.720 161 253 2.8E-23 T 28-03-2018 AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 179 0.0074 T 28-03-2018 AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 Gene3D G3DSA:3.40.50.720 4 160 2.2E-35 T 28-03-2018 AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24055 0c48b37c7cd59b3d4cd741bee8bb4366 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21405 fd7f49057b5daa8b32205531e277d8cf 396 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 214 377 1.9E-41 T 28-03-2018 IPR000160 GGDEF domain AL504_RS21405 fd7f49057b5daa8b32205531e277d8cf 396 SMART SM00267 206 378 3.0E-51 T 28-03-2018 IPR000160 GGDEF domain AL504_RS21405 fd7f49057b5daa8b32205531e277d8cf 396 Gene3D G3DSA:3.30.70.270 207 380 5.2E-52 T 28-03-2018 AL504_RS21405 fd7f49057b5daa8b32205531e277d8cf 396 Pfam PF00990 Diguanylate cyclase, GGDEF domain 217 373 4.0E-40 T 28-03-2018 IPR000160 GGDEF domain AL504_RS21405 fd7f49057b5daa8b32205531e277d8cf 396 SUPERFAMILY SSF55073 222 377 6.98E-43 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS19005 0d2ece0d604b8399f2b642edef387784 257 SUPERFAMILY SSF52540 2 234 2.18E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19005 0d2ece0d604b8399f2b642edef387784 257 Gene3D G3DSA:3.40.50.300 1 220 8.2E-60 T 28-03-2018 AL504_RS19005 0d2ece0d604b8399f2b642edef387784 257 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19005 0d2ece0d604b8399f2b642edef387784 257 SMART SM00382 31 212 4.3E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19005 0d2ece0d604b8399f2b642edef387784 257 Pfam PF00005 ABC transporter 24 162 4.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 466 3.1E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 318 1.1E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 Gene3D G3DSA:3.30.565.10 328 484 3.5E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 Pfam PF08521 Two-component sensor kinase N-terminal 33 178 1.2E-31 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 SMART SM00387 370 483 2.2E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 SUPERFAMILY SSF47384 239 319 9.22E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 2.3E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 2.3E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 SMART SM00388 256 321 2.2E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 Gene3D G3DSA:1.10.287.130 247 317 2.4E-10 T 28-03-2018 AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 SUPERFAMILY SSF55874 326 477 3.14E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19450 20ac12c55e6ecb1c118e6c5b5ab6f0e4 494 Gene3D G3DSA:1.20.5.1040 19 68 6.6E-4 T 28-03-2018 AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.2E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.2E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 SUPERFAMILY SSF48008 101 233 2.09E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 SMART SM00345 18 77 2.8E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 7.0E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 SMART SM00895 99 226 3.4E-20 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 Gene3D G3DSA:1.10.10.10 5 79 5.9E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 Pfam PF07729 FCD domain 102 224 2.7E-25 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 SUPERFAMILY SSF46785 8 81 3.05E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30320 35bbeb6ece1035dbb27a8c37d0b001d5 237 Gene3D G3DSA:1.20.120.530 84 237 1.3E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 SMART SM00448 36 151 2.4E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 SUPERFAMILY SSF52172 35 162 1.27E-19 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 SMART SM00421 180 237 2.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 ProSitePatterns PS00622 LuxR-type HTH domain signature. 197 224 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 Pfam PF00196 Bacterial regulatory proteins, luxR family 182 233 3.8E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 Gene3D G3DSA:1.10.10.10 163 238 7.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 SUPERFAMILY SSF46894 176 236 2.24E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 Pfam PF00072 Response regulator receiver domain 38 151 1.3E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 Gene3D G3DSA:3.40.50.2300 35 162 8.9E-21 T 28-03-2018 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 197 2.0E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 213 2.0E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28970 cc366a39219a1c5d889232b01d89e883 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 225 2.0E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 Gene3D G3DSA:2.40.50.100 47 116 1.5E-13 T 28-03-2018 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 SUPERFAMILY SSF111369 172 299 1.57E-6 T 28-03-2018 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 SUPERFAMILY SSF111369 119 176 8.37E-5 T 28-03-2018 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 SUPERFAMILY SSF111369 41 106 2.88E-7 T 28-03-2018 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 Gene3D G3DSA:1.10.287.470 118 176 8.5E-11 T 28-03-2018 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 Gene3D G3DSA:2.40.50.100 199 250 8.2E-7 T 28-03-2018 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 Pfam PF13533 Biotin-lipoyl like 49 94 5.5E-7 T 28-03-2018 AL504_RS22835 2bcd99339a9664868b779d37fec36562 355 Pfam PF13437 HlyD family secretion protein 215 320 2.3E-14 T 28-03-2018 AL504_RS14780 f4d01c92d2b77783fa515310c948ef9a 575 Gene3D G3DSA:3.90.1310.10 33 227 3.5E-46 T 28-03-2018 AL504_RS14780 f4d01c92d2b77783fa515310c948ef9a 575 SUPERFAMILY SSF56519 60 226 1.44E-45 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL504_RS14780 f4d01c92d2b77783fa515310c948ef9a 575 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 9.0E-67 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL504_RS14780 f4d01c92d2b77783fa515310c948ef9a 575 Gene3D G3DSA:3.40.710.10 228 572 2.9E-76 T 28-03-2018 AL504_RS14780 f4d01c92d2b77783fa515310c948ef9a 575 SUPERFAMILY SSF56601 178 561 2.64E-82 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS14780 f4d01c92d2b77783fa515310c948ef9a 575 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 212 4.3E-23 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL504_RS14875 25f636d33770297ce5a6e81df0644fbc 184 Gene3D G3DSA:3.30.1060.10 8 180 4.7E-66 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS14875 25f636d33770297ce5a6e81df0644fbc 184 Pfam PF01625 Peptide methionine sulfoxide reductase 12 164 3.1E-59 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS14875 25f636d33770297ce5a6e81df0644fbc 184 SUPERFAMILY SSF55068 6 175 3.14E-70 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS14875 25f636d33770297ce5a6e81df0644fbc 184 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 9 168 34.544 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS14875 25f636d33770297ce5a6e81df0644fbc 184 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 11 163 3.3E-53 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS23350 b003d1eb5648583b555ce9da06c93d73 385 Pfam PF03594 Benzoate membrane transport protein 2 376 2.6E-130 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AL504_RS23350 b003d1eb5648583b555ce9da06c93d73 385 TIGRFAM TIGR00843 benE: benzoate transporter 4 376 3.2E-105 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AL504_RS23350 b003d1eb5648583b555ce9da06c93d73 385 Gene3D G3DSA:3.40.50.261 4 352 5.7E-4 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS14870 78847999fcb8421640de207a2f313cd4 370 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 176 286 9.6E-14 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS14870 78847999fcb8421640de207a2f313cd4 370 SUPERFAMILY SSF54593 7 353 3.15E-82 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS14870 78847999fcb8421640de207a2f313cd4 370 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 16 365 3.7E-118 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL504_RS14870 78847999fcb8421640de207a2f313cd4 370 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 8 153 2.0E-64 T 28-03-2018 AL504_RS14870 78847999fcb8421640de207a2f313cd4 370 PIRSF PIRSF009283 1 367 3.0E-123 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL504_RS14870 78847999fcb8421640de207a2f313cd4 370 Gene3D G3DSA:3.10.180.10 170 367 2.6E-60 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS14870 78847999fcb8421640de207a2f313cd4 370 Gene3D G3DSA:3.10.180.10 5 165 2.3E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS11860 cce0cc62de3edd5e948db1d361935933 151 Gene3D G3DSA:1.20.5.400 28 72 0.001 T 28-03-2018 AL504_RS11860 cce0cc62de3edd5e948db1d361935933 151 Pfam PF04977 Septum formation initiator 11 88 4.9E-25 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AL504_RS11860 cce0cc62de3edd5e948db1d361935933 151 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.788 T 28-03-2018 IPR023081 Cell division protein FtsB AL504_RS28790 7afde5b89512bd776f0aa6e8228f9248 311 Gene3D G3DSA:3.20.20.70 1 311 1.1E-108 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS28790 7afde5b89512bd776f0aa6e8228f9248 311 Pfam PF05853 beta-keto acid cleavage enzyme 7 303 9.2E-106 T 28-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 AL504_RS13695 e651a02cc0efaf0707947811848bed9f 110 Gene3D G3DSA:3.30.70.260 21 102 2.2E-4 T 28-03-2018 AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 SUPERFAMILY SSF51735 2 228 7.57E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 8.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 8.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 Pfam PF00106 short chain dehydrogenase 2 187 1.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27420 b843ee3956ca93108135b12227c6df26 231 Gene3D G3DSA:3.40.50.720 1 223 9.2E-39 T 28-03-2018 AL504_RS16530 e5884c704567f71231371315031cdae0 794 SMART SM00965 57 108 2.0E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS16530 e5884c704567f71231371315031cdae0 794 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 155 794 5.5E-107 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS16530 e5884c704567f71231371315031cdae0 794 Gene3D G3DSA:2.170.130.10 108 267 9.5E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS16530 e5884c704567f71231371315031cdae0 794 SUPERFAMILY SSF56935 110 794 1.62E-106 T 28-03-2018 AL504_RS16530 e5884c704567f71231371315031cdae0 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 155 247 1.4E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS16530 e5884c704567f71231371315031cdae0 794 Gene3D G3DSA:2.40.170.20 268 794 1.6E-66 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS16530 e5884c704567f71231371315031cdae0 794 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 777 794 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS16530 e5884c704567f71231371315031cdae0 794 Pfam PF00593 TonB dependent receptor 336 791 7.2E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS01735 949c3a4cdcf88a2f323dad7f43559793 308 Gene3D G3DSA:3.40.190.10 174 263 7.8E-20 T 28-03-2018 AL504_RS01735 949c3a4cdcf88a2f323dad7f43559793 308 Pfam PF03466 LysR substrate binding domain 88 294 3.8E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01735 949c3a4cdcf88a2f323dad7f43559793 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.8E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01735 949c3a4cdcf88a2f323dad7f43559793 308 SUPERFAMILY SSF46785 1 110 1.46E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01735 949c3a4cdcf88a2f323dad7f43559793 308 Gene3D G3DSA:1.10.10.10 1 85 5.9E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01735 949c3a4cdcf88a2f323dad7f43559793 308 SUPERFAMILY SSF53850 89 297 9.77E-40 T 28-03-2018 AL504_RS01735 949c3a4cdcf88a2f323dad7f43559793 308 Gene3D G3DSA:3.40.190.10 88 173 4.3E-13 T 28-03-2018 AL504_RS27890 fc7126b9a20f694e04d34a16874f2873 125 SUPERFAMILY SSF54427 1 123 9.95E-38 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS27890 fc7126b9a20f694e04d34a16874f2873 125 Gene3D G3DSA:3.10.450.50 2 125 1.5E-21 T 28-03-2018 AL504_RS27890 fc7126b9a20f694e04d34a16874f2873 125 Pfam PF11533 Protein of unknown function (DUF3225) 1 123 1.6E-62 T 28-03-2018 IPR024507 Protein of unknown function DUF3225 AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 Gene3D G3DSA:3.40.50.720 3 258 2.1E-60 T 28-03-2018 AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 246 9.1E-57 T 28-03-2018 AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 SUPERFAMILY SSF51735 6 249 1.36E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.3E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.3E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.3E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.3E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.3E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.3E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07710 a768d27f287bcd225bd4abaa77470cf9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.3E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 Gene3D G3DSA:3.30.460.10 244 377 1.4E-35 T 28-03-2018 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 Pfam PF13328 HD domain 78 227 5.4E-51 T 28-03-2018 IPR003607 HD/PDEase domain AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 Gene3D G3DSA:3.10.20.30 434 509 5.7E-25 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 SUPERFAMILY SSF109604 59 241 1.15E-70 T 28-03-2018 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 78 759 1.1E-220 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 SUPERFAMILY SSF81301 233 444 3.27E-59 T 28-03-2018 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 Pfam PF04607 Region found in RelA / SpoT proteins 287 395 8.2E-30 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 SMART SM00954 287 397 2.4E-57 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 SUPERFAMILY SSF55021 691 758 7.63E-5 T 28-03-2018 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 Pfam PF13291 ACT domain 688 761 1.2E-15 T 28-03-2018 IPR002912 ACT domain AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 Pfam PF02824 TGS domain 440 499 7.0E-24 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 SMART SM00471 93 205 5.2E-9 T 28-03-2018 IPR003607 HD/PDEase domain AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 Gene3D G3DSA:3.30.70.260 680 764 1.1E-7 T 28-03-2018 AL504_RS04915 a67c00b6df95314f3c09f07d4316d3bf 764 SUPERFAMILY SSF81271 427 500 3.05E-23 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL504_RS04910 bdcf42895b93637133acc12388a0c0d4 67 SMART SM01409 8 59 1.1E-11 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL504_RS04910 bdcf42895b93637133acc12388a0c0d4 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 15.492 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS04910 bdcf42895b93637133acc12388a0c0d4 67 Gene3D G3DSA:3.90.940.10 1 65 3.4E-17 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL504_RS04910 bdcf42895b93637133acc12388a0c0d4 67 SUPERFAMILY SSF63562 1 63 2.09E-18 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL504_RS04910 bdcf42895b93637133acc12388a0c0d4 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 56 9.4E-16 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL504_RS04910 bdcf42895b93637133acc12388a0c0d4 67 Pfam PF01192 RNA polymerase Rpb6 8 56 8.5E-13 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL504_RS04280 e94497ecf3799895fc78ad30e663b7bc 313 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 310 3.5E-21 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS04280 e94497ecf3799895fc78ad30e663b7bc 313 Gene3D G3DSA:3.40.50.720 110 281 1.7E-55 T 28-03-2018 AL504_RS04280 e94497ecf3799895fc78ad30e663b7bc 313 SUPERFAMILY SSF51735 100 280 3.71E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04280 e94497ecf3799895fc78ad30e663b7bc 313 SUPERFAMILY SSF52283 3 133 1.21E-30 T 28-03-2018 AL504_RS04280 e94497ecf3799895fc78ad30e663b7bc 313 Gene3D G3DSA:3.40.50.720 1 109 1.1E-27 T 28-03-2018 AL504_RS04280 e94497ecf3799895fc78ad30e663b7bc 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 279 1.1E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS05315 38dde9c00c1e57a7f95da90852f1a38b 293 Gene3D G3DSA:2.160.20.70 64 140 0.21 T 28-03-2018 AL504_RS05315 38dde9c00c1e57a7f95da90852f1a38b 293 Gene3D G3DSA:2.160.20.70 141 216 0.033 T 28-03-2018 AL504_RS24280 690f7a2fc2c714af467c1d9acb8575ce 159 PIRSF PIRSF021700 1 159 8.9E-65 T 28-03-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AL504_RS24280 690f7a2fc2c714af467c1d9acb8575ce 159 SUPERFAMILY SSF54593 4 157 1.27E-47 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS24280 690f7a2fc2c714af467c1d9acb8575ce 159 Gene3D G3DSA:3.10.180.10 1 127 8.2E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS24280 690f7a2fc2c714af467c1d9acb8575ce 159 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 119 7.0E-44 T 28-03-2018 IPR028973 PhnB-like AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 SUPERFAMILY SSF53383 141 496 3.71E-75 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 SMART SM00345 22 81 1.2E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 8.1E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 8.1E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 Gene3D G3DSA:3.40.640.10 180 385 3.3E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 Gene3D G3DSA:3.90.1150.10 386 498 1.5E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 81 2.6E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 Gene3D G3DSA:1.10.10.10 10 83 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 Pfam PF00155 Aminotransferase class I and II 182 432 1.5E-14 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS29745 57121f142bd6e8bb714ac30222b558d6 498 SUPERFAMILY SSF46785 15 84 5.45E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 Hamap MF_01201 Alanine racemase. 2 374 32.692 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 Gene3D G3DSA:2.40.37.10 236 373 2.2E-55 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 282 297 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 356 369 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 265 280 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 130 142 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 303 320 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 36 52 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 167 178 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 208 235 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 PRINTS PR00992 Alanine racemase signature 70 88 4.9E-60 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 Pfam PF01168 Alanine racemase, N-terminal domain 10 235 1.2E-61 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 41 51 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 SMART SM01005 249 374 6.4E-63 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 Gene3D G3DSA:3.20.20.10 6 235 2.7E-40 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 SUPERFAMILY SSF50621 244 371 1.26E-44 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 TIGRFAM TIGR00492 alr: alanine racemase 5 371 5.1E-101 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 SUPERFAMILY SSF51419 9 250 8.11E-55 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS30235 e3556170a09b08baeb41db1a5d5d779a 375 Pfam PF00842 Alanine racemase, C-terminal domain 249 370 3.2E-41 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 535 2.0E-23 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 Gene3D G3DSA:3.40.50.980 195 346 1.9E-33 T 28-03-2018 AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 Gene3D G3DSA:3.40.50.980 18 194 2.6E-41 T 28-03-2018 AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 Gene3D G3DSA:2.30.38.10 347 439 2.2E-25 T 28-03-2018 AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 Pfam PF00501 AMP-binding enzyme 32 446 3.0E-85 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 SUPERFAMILY SSF56801 5 545 1.26E-150 T 28-03-2018 AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS11840 834cc185e54f08cdffcfd581ef1373d0 555 Gene3D G3DSA:3.30.300.30 441 555 1.7E-32 T 28-03-2018 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 Gene3D G3DSA:3.40.190.10 98 184 6.0E-15 T 28-03-2018 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 SUPERFAMILY SSF46785 2 85 2.88E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 SUPERFAMILY SSF53850 90 296 2.58E-43 T 28-03-2018 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 Gene3D G3DSA:3.40.190.10 185 270 4.2E-18 T 28-03-2018 AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 Gene3D G3DSA:1.10.10.10 1 86 6.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14025 7e40e808b6fc7f314b28f9f7cc556986 300 Pfam PF03466 LysR substrate binding domain 98 298 1.5E-27 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14480 c536e0d7be9cbd4b1df4126678139f8b 165 Gene3D G3DSA:1.10.1740.10 4 81 1.4E-14 T 28-03-2018 AL504_RS14480 c536e0d7be9cbd4b1df4126678139f8b 165 Pfam PF04542 Sigma-70 region 2 12 77 5.9E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14480 c536e0d7be9cbd4b1df4126678139f8b 165 SUPERFAMILY SSF88659 100 164 4.36E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14480 c536e0d7be9cbd4b1df4126678139f8b 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 160 2.0E-16 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14480 c536e0d7be9cbd4b1df4126678139f8b 165 Gene3D G3DSA:1.10.10.10 86 165 8.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14480 c536e0d7be9cbd4b1df4126678139f8b 165 SUPERFAMILY SSF88946 4 74 1.06E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14480 c536e0d7be9cbd4b1df4126678139f8b 165 Pfam PF08281 Sigma-70, region 4 108 160 5.8E-11 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22885 02d1b0b646b42f9f5fd3520b6274a261 77 SMART SM00530 6 62 7.0E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS22885 02d1b0b646b42f9f5fd3520b6274a261 77 SUPERFAMILY SSF47413 1 68 1.3E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS22885 02d1b0b646b42f9f5fd3520b6274a261 77 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 3.7E-24 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS22885 02d1b0b646b42f9f5fd3520b6274a261 77 Gene3D G3DSA:1.10.260.40 2 64 5.9E-12 T 28-03-2018 AL504_RS04010 2265a222fe343fea24843433e96d2e06 360 SUPERFAMILY SSF47823 21 76 7.45E-13 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AL504_RS04010 2265a222fe343fea24843433e96d2e06 360 SUPERFAMILY SSF47823 105 153 7.45E-13 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AL504_RS04010 2265a222fe343fea24843433e96d2e06 360 Gene3D G3DSA:1.10.443.10 161 349 1.3E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS04010 2265a222fe343fea24843433e96d2e06 360 SUPERFAMILY SSF56349 159 351 1.88E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS04010 2265a222fe343fea24843433e96d2e06 360 Gene3D G3DSA:1.10.150.130 18 156 6.7E-13 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS04010 2265a222fe343fea24843433e96d2e06 360 Pfam PF00589 Phage integrase family 163 338 2.0E-15 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS01190 0e3373a22657d0c5a25eb472e87ca8c9 116 PIRSF PIRSF029826 1 116 8.7E-44 T 28-03-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 AL504_RS01190 0e3373a22657d0c5a25eb472e87ca8c9 116 Gene3D G3DSA:1.10.4010.10 2 113 3.9E-24 T 28-03-2018 AL504_RS01190 0e3373a22657d0c5a25eb472e87ca8c9 116 SUPERFAMILY SSF101386 1 115 5.09E-37 T 28-03-2018 AL504_RS01190 0e3373a22657d0c5a25eb472e87ca8c9 116 Pfam PF12643 MazG-like family 36 116 1.6E-15 T 28-03-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 AL504_RS30125 2afe7b50e8d96affcb0c845c0cd5e392 111 Gene3D G3DSA:3.10.20.30 1 99 5.4E-22 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS30125 2afe7b50e8d96affcb0c845c0cd5e392 111 SUPERFAMILY SSF54292 3 89 1.84E-26 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS30125 2afe7b50e8d96affcb0c845c0cd5e392 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 81 6.9E-14 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 Gene3D G3DSA:3.30.450.40 7 169 4.2E-11 T 28-03-2018 IPR029016 GAF domain-like AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 208 221 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 SMART SM00382 204 347 3.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 397 406 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 SUPERFAMILY SSF55781 19 166 2.04E-10 T 28-03-2018 IPR029016 GAF domain-like AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 270 285 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 Gene3D G3DSA:1.10.10.60 464 506 2.6E-8 T 28-03-2018 AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 SUPERFAMILY SSF52540 183 417 1.28E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 SUPERFAMILY SSF46689 456 504 6.72E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 Gene3D G3DSA:1.10.8.60 357 463 3.1E-19 T 28-03-2018 AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 Pfam PF00158 Sigma-54 interaction domain 184 350 3.6E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS12770 fd2b1c6fd03a588bf5a9602431863135 506 Gene3D G3DSA:3.40.50.300 179 356 9.4E-30 T 28-03-2018 AL504_RS16905 890857ebc975763f685d6b1497ab49c7 268 SUPERFAMILY SSF46689 198 249 5.38E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16905 890857ebc975763f685d6b1497ab49c7 268 Gene3D G3DSA:3.40.50.2300 46 149 0.0016 T 28-03-2018 AL504_RS16905 890857ebc975763f685d6b1497ab49c7 268 Gene3D G3DSA:1.10.10.60 150 253 1.9E-10 T 28-03-2018 AL504_RS16905 890857ebc975763f685d6b1497ab49c7 268 Pfam PF02954 Bacterial regulatory protein, Fis family 209 245 1.0E-4 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS16905 890857ebc975763f685d6b1497ab49c7 268 SUPERFAMILY SSF52172 63 148 3.85E-5 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28110 3084dc417b02ab6a326a5c905bdfa449 312 Pfam PF01171 PP-loop family 1 182 6.4E-46 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL504_RS28110 3084dc417b02ab6a326a5c905bdfa449 312 Gene3D G3DSA:3.40.50.620 1 210 2.3E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS28110 3084dc417b02ab6a326a5c905bdfa449 312 SUPERFAMILY SSF52402 1 215 2.92E-49 T 28-03-2018 AL504_RS28110 3084dc417b02ab6a326a5c905bdfa449 312 SUPERFAMILY SSF82829 232 306 2.09E-18 T 28-03-2018 AL504_RS28110 3084dc417b02ab6a326a5c905bdfa449 312 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 295 19.596 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL504_RS28110 3084dc417b02ab6a326a5c905bdfa449 312 Pfam PF09179 TilS substrate binding domain 234 303 1.4E-14 T 28-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL504_RS28110 3084dc417b02ab6a326a5c905bdfa449 312 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 185 3.3E-42 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL504_RS16215 95638052dd1e265cef68601320d40395 232 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 231 1.1E-51 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS16215 95638052dd1e265cef68601320d40395 232 SUPERFAMILY SSF56529 21 231 6.54E-70 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS16215 95638052dd1e265cef68601320d40395 232 Gene3D G3DSA:3.90.850.10 4 232 2.7E-76 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 Pfam PF03466 LysR substrate binding domain 89 275 3.0E-21 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.4E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 Gene3D G3DSA:3.40.190.10 93 176 1.7E-11 T 28-03-2018 AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 Gene3D G3DSA:1.10.10.10 1 88 6.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 Gene3D G3DSA:3.40.190.10 177 256 4.6E-10 T 28-03-2018 AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 SUPERFAMILY SSF46785 5 112 9.91E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15500 0eeea6478d1a0c0c01f97f68b5dab2c3 285 SUPERFAMILY SSF53850 90 281 4.52E-21 T 28-03-2018 AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 PIRSF PIRSF000094 1 260 8.4E-114 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 SUPERFAMILY SSF51735 6 254 9.36E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 Gene3D G3DSA:3.40.50.720 2 42 0.084 T 28-03-2018 AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 Gene3D G3DSA:3.40.50.720 43 260 7.2E-38 T 28-03-2018 AL504_RS15230 9c9086e5640469ba89ba91c6a48d7af6 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 2.0E-87 T 28-03-2018 AL504_RS28445 0edf4b15a215674ca8ffb94403eb1707 317 Gene3D G3DSA:3.90.25.10 168 312 9.1E-43 T 28-03-2018 AL504_RS28445 0edf4b15a215674ca8ffb94403eb1707 317 SUPERFAMILY SSF51735 2 308 9.41E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28445 0edf4b15a215674ca8ffb94403eb1707 317 Gene3D G3DSA:3.40.50.720 7 167 1.5E-14 T 28-03-2018 AL504_RS28445 0edf4b15a215674ca8ffb94403eb1707 317 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 5 307 47.859 T 28-03-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 AL504_RS28445 0edf4b15a215674ca8ffb94403eb1707 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 239 2.4E-78 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Gene3D G3DSA:2.40.50.140 111 191 1.4E-10 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Gene3D G3DSA:2.40.50.140 196 280 4.2E-27 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Gene3D G3DSA:2.40.50.140 459 540 5.7E-18 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 304 323 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 122 138 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 98 117 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 140 157 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 169 189 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 53 67 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 35 53 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 226 247 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PRINTS PR00681 Ribosomal protein S1 signature 344 362 5.2E-81 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SMART SM00316 117 185 2.6E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SMART SM00316 204 274 1.9E-29 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SMART SM00316 289 361 4.2E-24 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SMART SM00316 33 101 0.0041 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SMART SM00316 376 448 2.0E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SMART SM00316 463 534 1.3E-15 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SUPERFAMILY SSF50249 18 127 8.58E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Gene3D G3DSA:2.40.50.140 288 362 6.9E-25 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Gene3D G3DSA:2.40.50.140 11 104 2.3E-7 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SUPERFAMILY SSF50249 117 199 7.25E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 17 534 4.9E-206 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SUPERFAMILY SSF50249 269 370 7.38E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SUPERFAMILY SSF50249 356 454 2.01E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SUPERFAMILY SSF50249 443 545 1.86E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 SUPERFAMILY SSF50249 204 291 1.29E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 PIRSF PIRSF002111 3 548 2.7E-213 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Gene3D G3DSA:2.40.50.140 373 454 2.4E-21 T 28-03-2018 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Pfam PF00575 S1 RNA binding domain 33 99 4.9E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Pfam PF00575 S1 RNA binding domain 376 448 4.6E-18 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Pfam PF00575 S1 RNA binding domain 463 534 4.6E-14 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Pfam PF00575 S1 RNA binding domain 290 361 1.3E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Pfam PF00575 S1 RNA binding domain 204 274 1.6E-23 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS11410 358b0d119f8b5f77063a7b0c7e7ebd6d 575 Pfam PF00575 S1 RNA binding domain 117 185 3.5E-12 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS29650 979322c6c0e20198a6f5e64640adea89 356 SUPERFAMILY SSF52540 39 254 3.26E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29650 979322c6c0e20198a6f5e64640adea89 356 Pfam PF00350 Dynamin family 47 215 6.5E-12 T 28-03-2018 IPR022812 Dynamin superfamily AL504_RS29650 979322c6c0e20198a6f5e64640adea89 356 Gene3D G3DSA:3.40.50.300 25 296 2.7E-25 T 28-03-2018 AL504_RS09960 b076233d131cadb999754454eb444601 226 SUPERFAMILY SSF100950 4 150 2.93E-40 T 28-03-2018 AL504_RS09960 b076233d131cadb999754454eb444601 226 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 54 218 1.4E-55 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS09960 b076233d131cadb999754454eb444601 226 Gene3D G3DSA:3.40.50.1360 1 142 1.7E-35 T 28-03-2018 AL504_RS09960 b076233d131cadb999754454eb444601 226 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 4 222 32.447 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS09960 b076233d131cadb999754454eb444601 226 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 8 219 1.0E-59 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL504_RS09960 b076233d131cadb999754454eb444601 226 SUPERFAMILY SSF75445 132 203 7.33E-21 T 28-03-2018 AL504_RS09960 b076233d131cadb999754454eb444601 226 Gene3D G3DSA:3.30.70.260 143 201 5.8E-21 T 28-03-2018 AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 Gene3D G3DSA:1.10.10.10 10 91 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 Pfam PF03466 LysR substrate binding domain 96 296 1.9E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 SUPERFAMILY SSF46785 8 90 1.01E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 SUPERFAMILY SSF53850 96 298 4.34E-30 T 28-03-2018 AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 6.8E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 Gene3D G3DSA:3.40.190.10 181 267 1.4E-18 T 28-03-2018 AL504_RS17170 77b5b05847e7bdb77a11c7064b6b0a58 309 Gene3D G3DSA:3.40.190.10 97 180 1.3E-11 T 28-03-2018 AL504_RS25570 18c19b040f94179453557ee8014007fd 157 Pfam PF02130 Uncharacterized protein family UPF0054 28 147 1.2E-27 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL504_RS25570 18c19b040f94179453557ee8014007fd 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 46 148 8.3E-27 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL504_RS25570 18c19b040f94179453557ee8014007fd 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 152 19.427 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL504_RS25570 18c19b040f94179453557ee8014007fd 157 Gene3D G3DSA:3.40.390.30 2 157 3.2E-39 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AL504_RS25570 18c19b040f94179453557ee8014007fd 157 SUPERFAMILY SSF55486 32 154 3.17E-36 T 28-03-2018 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 SUPERFAMILY SSF52540 20 265 6.74E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 277 0.0017 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 515 541 3.2E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 SMART SM00382 43 243 1.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 SMART SM00382 322 513 1.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 SUPERFAMILY SSF52540 286 535 7.62E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 Gene3D G3DSA:3.40.50.300 282 549 9.6E-73 T 28-03-2018 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 Gene3D G3DSA:3.40.50.300 13 281 3.3E-73 T 28-03-2018 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 Pfam PF00005 ABC transporter 315 463 1.0E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23030 3767e879dd6af499d541e7a3feec0baa 561 Pfam PF00005 ABC transporter 35 193 1.5E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS08530 f14424605c1b3db2d5e5afe2956c6abb 315 Pfam PF07859 alpha/beta hydrolase fold 85 287 2.6E-12 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AL504_RS08530 f14424605c1b3db2d5e5afe2956c6abb 315 Gene3D G3DSA:3.40.50.1820 52 315 2.8E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS08530 f14424605c1b3db2d5e5afe2956c6abb 315 SUPERFAMILY SSF53474 69 306 2.11E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS14400 52d5e9b0f94e247bc510bb1b77b5801f 384 SUPERFAMILY SSF110738 6 377 9.42E-130 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL504_RS14400 52d5e9b0f94e247bc510bb1b77b5801f 384 PIRSF PIRSF006078 5 381 3.4E-129 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL504_RS14400 52d5e9b0f94e247bc510bb1b77b5801f 384 Pfam PF02595 Glycerate kinase family 7 376 1.8E-143 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL504_RS14400 52d5e9b0f94e247bc510bb1b77b5801f 384 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 6 377 1.7E-145 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL504_RS14400 52d5e9b0f94e247bc510bb1b77b5801f 384 Gene3D G3DSA:3.90.1510.10 46 278 2.9E-93 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AL504_RS08575 6156ec045a0a4c05a2ed857e727c9a29 364 SUPERFAMILY SSF53850 165 319 1.94E-7 T 28-03-2018 AL504_RS08575 6156ec045a0a4c05a2ed857e727c9a29 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 323 2.4E-43 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS08575 6156ec045a0a4c05a2ed857e727c9a29 364 PIRSF PIRSF039026 1 357 3.1E-102 T 28-03-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL504_RS08575 6156ec045a0a4c05a2ed857e727c9a29 364 Gene3D G3DSA:3.40.190.10 162 315 7.4E-6 T 28-03-2018 AL504_RS17780 50433c08b014fb3bdebe9fed89600772 296 Pfam PF01040 UbiA prenyltransferase family 27 275 8.3E-56 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL504_RS17780 50433c08b014fb3bdebe9fed89600772 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 11 292 18.929 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL504_RS17780 50433c08b014fb3bdebe9fed89600772 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 14 291 4.1E-91 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 SUPERFAMILY SSF49354 2 127 1.05E-34 T 28-03-2018 IPR008962 PapD-like AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 Gene3D G3DSA:2.60.40.10 131 224 3.2E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 7 127 6.2E-35 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 SUPERFAMILY SSF49584 138 224 3.01E-17 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 PRINTS PR00969 Pili chaperone signature 52 73 1.2E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 PRINTS PR00969 Pili chaperone signature 84 101 1.2E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 PRINTS PR00969 Pili chaperone signature 7 16 1.2E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 PRINTS PR00969 Pili chaperone signature 146 161 1.2E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 PRINTS PR00969 Pili chaperone signature 109 124 1.2E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 152 211 3.1E-11 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AL504_RS27635 b1cdac5ecf04e168ea10d4e9ad0a3e0e 231 Gene3D G3DSA:2.60.40.10 6 128 3.2E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 SUPERFAMILY SSF46689 222 270 6.72E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 Pfam PF12833 Helix-turn-helix domain 192 269 6.1E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 Pfam PF12852 Cupin 3 155 7.3E-26 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 Gene3D G3DSA:1.10.10.60 144 227 3.4E-13 T 28-03-2018 AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 Gene3D G3DSA:1.10.10.60 228 278 1.4E-10 T 28-03-2018 AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 SMART SM00342 186 268 1.1E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 SUPERFAMILY SSF46689 169 219 8.97E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00085 ab771a7e569ba1226dda687d28962e42 280 Gene3D G3DSA:2.60.120.280 8 143 3.6E-6 T 28-03-2018 AL504_RS11900 01e3df1662e1cec319ad962453943ff6 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 74 1.1E-11 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS11900 01e3df1662e1cec319ad962453943ff6 300 Gene3D G3DSA:1.10.3720.10 25 287 4.3E-47 T 28-03-2018 AL504_RS11900 01e3df1662e1cec319ad962453943ff6 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 298 3.0E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS11900 01e3df1662e1cec319ad962453943ff6 300 SUPERFAMILY SSF161098 92 282 4.97E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS12310 b58d1852f10fe4839b7dbdb52e8eb7f4 257 SUPERFAMILY SSF52540 4 247 1.92E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12310 b58d1852f10fe4839b7dbdb52e8eb7f4 257 Pfam PF00005 ABC transporter 22 177 1.9E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12310 b58d1852f10fe4839b7dbdb52e8eb7f4 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 246 5.5E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS12310 b58d1852f10fe4839b7dbdb52e8eb7f4 257 Gene3D G3DSA:3.40.50.300 2 251 7.0E-56 T 28-03-2018 AL504_RS12310 b58d1852f10fe4839b7dbdb52e8eb7f4 257 SMART SM00382 30 224 3.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15070 bfa9a1a81fe259dbfbe92c65838bda1f 214 Pfam PF01810 LysE type translocator 30 202 4.2E-17 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS29340 0b66945799cfd13afa5e515992128550 639 SMART SM00560 202 353 0.0038 T 28-03-2018 IPR006558 LamG-like jellyroll fold AL504_RS29340 0b66945799cfd13afa5e515992128550 639 Pfam PF10102 Domain of unknown function (DUF2341) 72 153 1.3E-19 T 28-03-2018 IPR018765 Domain of unknown function DUF2341 AL504_RS29340 0b66945799cfd13afa5e515992128550 639 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 195 300 9.0E-14 T 28-03-2018 AL504_RS29340 0b66945799cfd13afa5e515992128550 639 Gene3D G3DSA:2.60.120.200 122 360 8.1E-29 T 28-03-2018 AL504_RS29340 0b66945799cfd13afa5e515992128550 639 SUPERFAMILY SSF49899 334 357 7.62E-26 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AL504_RS29340 0b66945799cfd13afa5e515992128550 639 SUPERFAMILY SSF49899 135 298 7.62E-26 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AL504_RS29340 0b66945799cfd13afa5e515992128550 639 Pfam PF01618 MotA/TolQ/ExbB proton channel family 481 590 6.3E-27 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL504_RS08670 850da1f5f87a86de8f867d62a578d24c 322 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 311 3.1E-95 T 28-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL504_RS08670 850da1f5f87a86de8f867d62a578d24c 322 Gene3D G3DSA:3.90.1200.10 107 316 9.2E-23 T 28-03-2018 AL504_RS08670 850da1f5f87a86de8f867d62a578d24c 322 Hamap MF_00301 Homoserine kinase [thrB]. 1 322 157.6 T 28-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL504_RS08670 850da1f5f87a86de8f867d62a578d24c 322 Gene3D G3DSA:3.30.200.20 1 102 3.7E-24 T 28-03-2018 AL504_RS08670 850da1f5f87a86de8f867d62a578d24c 322 Pfam PF01636 Phosphotransferase enzyme family 27 262 3.9E-33 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AL504_RS08670 850da1f5f87a86de8f867d62a578d24c 322 SUPERFAMILY SSF56112 5 314 1.44E-71 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS23540 e50b191a71912071bb12f4f368f3f75e 319 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 282 1.8E-21 T 28-03-2018 IPR017039 Virulence factor BrkB AL504_RS23540 e50b191a71912071bb12f4f368f3f75e 319 Pfam PF03631 Virulence factor BrkB 29 285 2.1E-53 T 28-03-2018 IPR017039 Virulence factor BrkB AL504_RS23540 e50b191a71912071bb12f4f368f3f75e 319 PIRSF PIRSF035875 6 307 3.8E-72 T 28-03-2018 IPR017039 Virulence factor BrkB AL504_RS10300 5e88fd72e1812fd3f00b630a212083ab 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 521 2.7E-44 T 28-03-2018 IPR000160 GGDEF domain AL504_RS10300 5e88fd72e1812fd3f00b630a212083ab 525 Gene3D G3DSA:3.30.70.270 358 525 1.6E-52 T 28-03-2018 AL504_RS10300 5e88fd72e1812fd3f00b630a212083ab 525 SUPERFAMILY SSF55073 370 521 2.9E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS10300 5e88fd72e1812fd3f00b630a212083ab 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 518 4.0E-42 T 28-03-2018 IPR000160 GGDEF domain AL504_RS10300 5e88fd72e1812fd3f00b630a212083ab 525 SMART SM00267 351 523 6.1E-54 T 28-03-2018 IPR000160 GGDEF domain AL504_RS10300 5e88fd72e1812fd3f00b630a212083ab 525 Gene3D G3DSA:3.30.450.20 52 180 0.0036 T 28-03-2018 AL504_RS10300 5e88fd72e1812fd3f00b630a212083ab 525 Gene3D G3DSA:3.30.450.20 181 288 6.8E-11 T 28-03-2018 AL504_RS29325 0cc34da8f51cec67fd0a2e89cd44c5c7 321 Pfam PF04773 FecR protein 121 209 3.3E-11 T 28-03-2018 IPR006860 FecR protein AL504_RS29325 0cc34da8f51cec67fd0a2e89cd44c5c7 321 PIRSF PIRSF018266 10 321 1.8E-62 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS29325 0cc34da8f51cec67fd0a2e89cd44c5c7 321 Gene3D G3DSA:2.60.120.10 136 247 2.2E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS29325 0cc34da8f51cec67fd0a2e89cd44c5c7 321 Pfam PF16220 Domain of unknown function (DUF4880) 20 59 1.4E-10 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS30270 a2e80c1e357dadc1e713890ccb3ac8c0 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 7.3E-67 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AL504_RS30270 a2e80c1e357dadc1e713890ccb3ac8c0 283 Gene3D G3DSA:3.40.830.10 2 275 8.9E-54 T 28-03-2018 AL504_RS30270 a2e80c1e357dadc1e713890ccb3ac8c0 283 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 3.9E-147 T 28-03-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 AL504_RS30270 a2e80c1e357dadc1e713890ccb3ac8c0 283 SUPERFAMILY SSF53213 12 277 9.16E-53 T 28-03-2018 AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 SUPERFAMILY SSF51735 11 258 6.99E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 1.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 1.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 Gene3D G3DSA:3.40.50.720 52 260 1.4E-58 T 28-03-2018 AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 Gene3D G3DSA:3.40.50.720 8 51 1.1E-10 T 28-03-2018 AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 200 0.0014 T 28-03-2018 AL504_RS19015 1376a1b9ed815d560a141a4d589b30ec 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 257 1.8E-59 T 28-03-2018 AL504_RS26605 7aceeb4db06e26e6c57970b8ab1c5395 199 SUPERFAMILY SSF53955 6 161 1.52E-23 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS26605 7aceeb4db06e26e6c57970b8ab1c5395 199 Gene3D G3DSA:1.10.530.10 33 193 1.0E-18 T 28-03-2018 AL504_RS19150 f1e7245c3c920158c17854e715bdf38e 266 SUPERFAMILY SSF161098 9 255 1.96E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19150 f1e7245c3c920158c17854e715bdf38e 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 254 1.1E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19150 f1e7245c3c920158c17854e715bdf38e 266 Gene3D G3DSA:1.10.3720.10 9 256 6.9E-43 T 28-03-2018 AL504_RS21565 205e96977e726e59eabe8cb21e7a89a8 302 Gene3D G3DSA:1.10.1040.10 171 296 1.9E-36 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS21565 205e96977e726e59eabe8cb21e7a89a8 302 SUPERFAMILY SSF48179 172 294 1.47E-38 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS21565 205e96977e726e59eabe8cb21e7a89a8 302 Gene3D G3DSA:3.40.50.720 1 170 4.2E-32 T 28-03-2018 AL504_RS21565 205e96977e726e59eabe8cb21e7a89a8 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 10 167 3.4E-39 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL504_RS21565 205e96977e726e59eabe8cb21e7a89a8 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 173 292 5.4E-38 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL504_RS21565 205e96977e726e59eabe8cb21e7a89a8 302 PIRSF PIRSF000103 3 296 8.3E-69 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS21565 205e96977e726e59eabe8cb21e7a89a8 302 SUPERFAMILY SSF51735 10 169 2.93E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS18430 78da8643998b44182ccfad23e917f902 295 SUPERFAMILY SSF46689 193 240 2.27E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS18430 78da8643998b44182ccfad23e917f902 295 SUPERFAMILY SSF46689 242 291 8.06E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS18430 78da8643998b44182ccfad23e917f902 295 SMART SM00342 206 289 2.9E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS18430 78da8643998b44182ccfad23e917f902 295 Gene3D G3DSA:1.10.10.60 245 295 9.8E-16 T 28-03-2018 AL504_RS18430 78da8643998b44182ccfad23e917f902 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS18430 78da8643998b44182ccfad23e917f902 295 Pfam PF12833 Helix-turn-helix domain 212 290 1.7E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS18430 78da8643998b44182ccfad23e917f902 295 Gene3D G3DSA:1.10.10.60 104 244 3.1E-13 T 28-03-2018 AL504_RS06965 fa97fe74ad601ebbe79f1b8cdf19f874 497 Pfam PF07171 MlrC C-terminus 304 481 1.1E-56 T 28-03-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal AL504_RS06965 fa97fe74ad601ebbe79f1b8cdf19f874 497 Pfam PF07364 Metallopeptidase family M81 3 291 1.8E-97 T 28-03-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal AL504_RS06965 fa97fe74ad601ebbe79f1b8cdf19f874 497 PIRSF PIRSF012702 1 496 2.9E-169 T 28-03-2018 IPR009197 Microcystin LR degradation protein MlrC AL504_RS06965 fa97fe74ad601ebbe79f1b8cdf19f874 497 Gene3D G3DSA:3.20.20.70 42 354 9.0E-5 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 SUPERFAMILY SSF56655 3 333 1.45E-117 T 28-03-2018 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 Gene3D G3DSA:3.40.190.80 202 336 5.0E-54 T 28-03-2018 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 Gene3D G3DSA:3.30.540.10 8 201 1.0E-59 T 28-03-2018 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PIRSF PIRSF500210 1 337 5.3E-126 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PIRSF PIRSF000904 1 338 2.7E-123 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 335 46.847 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 196 3.7E-61 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 1.6E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 181 204 1.6E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 150 173 1.6E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 1.6E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 207 234 1.6E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS10560 f9702df75100455f21f7c31e24ebadb1 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 309 334 1.6E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL504_RS05020 a56422c63bad4c40fa86d6d10a4eb10c 448 ProSitePatterns PS00571 Amidases signature. 153 184 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS05020 a56422c63bad4c40fa86d6d10a4eb10c 448 Gene3D G3DSA:3.90.1300.10 3 447 2.9E-116 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS05020 a56422c63bad4c40fa86d6d10a4eb10c 448 Pfam PF01425 Amidase 21 436 6.6E-82 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS05020 a56422c63bad4c40fa86d6d10a4eb10c 448 SUPERFAMILY SSF75304 4 446 3.01E-113 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS29980 4c60a7e3955a1bce49d603774925bfd7 510 Gene3D G3DSA:3.10.105.10 288 481 2.4E-40 T 28-03-2018 AL504_RS29980 4c60a7e3955a1bce49d603774925bfd7 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 1.7E-93 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS29980 4c60a7e3955a1bce49d603774925bfd7 510 PIRSF PIRSF002741 2 509 1.9E-102 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS29980 4c60a7e3955a1bce49d603774925bfd7 510 SUPERFAMILY SSF53850 28 505 3.08E-133 T 28-03-2018 AL504_RS29980 4c60a7e3955a1bce49d603774925bfd7 510 Gene3D G3DSA:3.40.190.10 153 287 2.1E-44 T 28-03-2018 AL504_RS29980 4c60a7e3955a1bce49d603774925bfd7 510 Gene3D G3DSA:3.90.76.10 56 152 8.1E-31 T 28-03-2018 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 SUPERFAMILY SSF53335 234 328 5.98E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 SUPERFAMILY SSF53335 5 134 5.98E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 SUPERFAMILY SSF81799 135 234 2.88E-33 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 43 328 6.2E-98 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 Gene3D G3DSA:3.40.50.150 230 328 0.073 T 28-03-2018 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 Pfam PF01795 MraW methylase family 2 328 1.7E-99 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 Gene3D G3DSA:1.10.150.170 143 229 9.1E-36 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 PIRSF PIRSF004486 1 330 2.0E-94 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 Gene3D G3DSA:3.40.50.150 5 142 8.9E-14 T 28-03-2018 AL504_RS14790 b0f557803103cbb50e0caba72ee6ecc7 365 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 329 36.253 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS13280 752eee25185440994806b15693e6baf2 212 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 40 201 1.8E-42 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL504_RS13280 752eee25185440994806b15693e6baf2 212 Gene3D G3DSA:2.50.20.10 26 212 1.9E-39 T 28-03-2018 AL504_RS13280 752eee25185440994806b15693e6baf2 212 SUPERFAMILY SSF89392 31 211 1.8E-42 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL504_RS13280 752eee25185440994806b15693e6baf2 212 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 11 209 2.3E-14 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL504_RS13280 752eee25185440994806b15693e6baf2 212 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 15 212 28.066 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL504_RS03600 f3cee8d1436884a29a9bf96f87c41896 365 Gene3D G3DSA:1.10.3720.10 18 365 1.5E-34 T 28-03-2018 AL504_RS03600 f3cee8d1436884a29a9bf96f87c41896 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 172 360 3.4E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03600 f3cee8d1436884a29a9bf96f87c41896 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 3.9E-16 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS03600 f3cee8d1436884a29a9bf96f87c41896 365 SUPERFAMILY SSF161098 155 345 1.96E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS25005 035f577b9084dd563bfb182b4fe32962 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 6.3E-85 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AL504_RS25005 035f577b9084dd563bfb182b4fe32962 204 Pfam PF00510 Cytochrome c oxidase subunit III 26 202 5.2E-15 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25005 035f577b9084dd563bfb182b4fe32962 204 Gene3D G3DSA:1.20.120.80 19 204 6.7E-51 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25005 035f577b9084dd563bfb182b4fe32962 204 SUPERFAMILY SSF81452 7 202 1.24E-57 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.0E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 Gene3D G3DSA:1.10.10.10 1 69 1.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 SMART SM01134 70 233 1.3E-54 T 28-03-2018 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 SMART SM00420 6 58 3.1E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 SUPERFAMILY SSF100950 72 232 3.35E-28 T 28-03-2018 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 Gene3D G3DSA:3.40.50.1360 70 237 1.9E-35 T 28-03-2018 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.1E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.1E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 Pfam PF00455 DeoR C terminal sensor domain 73 231 1.8E-41 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL504_RS19540 123b6364ac2cd4c5b334559e6f035813 253 SUPERFAMILY SSF46785 4 65 1.43E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06955 bc4f268ce8fe75b5b1acadafc28180fe 304 Gene3D G3DSA:3.40.190.10 91 177 3.6E-15 T 28-03-2018 AL504_RS06955 bc4f268ce8fe75b5b1acadafc28180fe 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS06955 bc4f268ce8fe75b5b1acadafc28180fe 304 SUPERFAMILY SSF53850 93 301 6.36E-34 T 28-03-2018 AL504_RS06955 bc4f268ce8fe75b5b1acadafc28180fe 304 Gene3D G3DSA:3.40.190.10 178 270 1.3E-19 T 28-03-2018 AL504_RS06955 bc4f268ce8fe75b5b1acadafc28180fe 304 Pfam PF03466 LysR substrate binding domain 92 298 5.0E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS06955 bc4f268ce8fe75b5b1acadafc28180fe 304 Gene3D G3DSA:1.10.10.10 1 86 9.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06955 bc4f268ce8fe75b5b1acadafc28180fe 304 SUPERFAMILY SSF46785 7 89 1.25E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19945 ef1d69620eb6b3d8b6c0c29f01e32aa4 254 Gene3D G3DSA:2.60.120.330 45 233 4.7E-48 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AL504_RS19945 ef1d69620eb6b3d8b6c0c29f01e32aa4 254 SUPERFAMILY SSF51197 61 221 1.37E-21 T 28-03-2018 AL504_RS19945 ef1d69620eb6b3d8b6c0c29f01e32aa4 254 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 54 210 3.8E-47 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AL504_RS01285 7fd0f366b6b16c50cf6c0afb9ed7e283 301 SUPERFAMILY SSF53850 94 300 1.76E-46 T 28-03-2018 AL504_RS01285 7fd0f366b6b16c50cf6c0afb9ed7e283 301 Gene3D G3DSA:3.40.190.10 180 269 4.8E-30 T 28-03-2018 AL504_RS01285 7fd0f366b6b16c50cf6c0afb9ed7e283 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 1.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01285 7fd0f366b6b16c50cf6c0afb9ed7e283 301 SUPERFAMILY SSF46785 11 115 1.67E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01285 7fd0f366b6b16c50cf6c0afb9ed7e283 301 Pfam PF03466 LysR substrate binding domain 94 298 1.1E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01285 7fd0f366b6b16c50cf6c0afb9ed7e283 301 Gene3D G3DSA:1.10.10.10 7 88 1.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01285 7fd0f366b6b16c50cf6c0afb9ed7e283 301 Gene3D G3DSA:3.40.190.10 93 179 2.0E-14 T 28-03-2018 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 227 243 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 111 129 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 420 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 256 275 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 446 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 148 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 374 392 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 42 67 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 350 368 6.4E-39 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 SUPERFAMILY SSF56235 6 534 6.18E-171 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS14925 b8a2013d66f1a71316b4543dee21b5a4 534 Pfam PF01019 Gamma-glutamyltranspeptidase 35 529 1.3E-150 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS09850 802cd5b7dadd32d5592d3607afc7a9c6 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 374 4.9E-39 T 28-03-2018 IPR000160 GGDEF domain AL504_RS09850 802cd5b7dadd32d5592d3607afc7a9c6 381 SMART SM00267 207 379 3.9E-52 T 28-03-2018 IPR000160 GGDEF domain AL504_RS09850 802cd5b7dadd32d5592d3607afc7a9c6 381 SUPERFAMILY SSF55073 223 377 7.06E-43 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS09850 802cd5b7dadd32d5592d3607afc7a9c6 381 Gene3D G3DSA:3.30.70.270 211 380 1.2E-52 T 28-03-2018 AL504_RS09850 802cd5b7dadd32d5592d3607afc7a9c6 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 379 2.3E-36 T 28-03-2018 IPR000160 GGDEF domain AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 Gene3D G3DSA:1.10.1040.10 160 291 3.2E-21 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 156 8.0E-35 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 Gene3D G3DSA:3.40.50.720 1 159 5.6E-28 T 28-03-2018 AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 283 2.6E-15 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 SUPERFAMILY SSF51735 1 162 3.4E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 PIRSF PIRSF000103 1 291 8.5E-67 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 SUPERFAMILY SSF48179 165 286 3.06E-24 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS24375 6a6b75f3610c4524e8c7969c1bfef283 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL504_RS10460 95f3a2997b70c5552ec79852cd73d2f0 152 SUPERFAMILY SSF47175 27 149 1.32E-40 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AL504_RS10460 95f3a2997b70c5552ec79852cd73d2f0 152 PIRSF PIRSF000027 6 151 1.5E-46 T 28-03-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL504_RS10460 95f3a2997b70c5552ec79852cd73d2f0 152 PRINTS PR00608 Class II cytochrome C signature 115 138 4.9E-9 T 28-03-2018 IPR015984 Cytochrome c prime, subgroup AL504_RS10460 95f3a2997b70c5552ec79852cd73d2f0 152 PRINTS PR00608 Class II cytochrome C signature 138 149 4.9E-9 T 28-03-2018 IPR015984 Cytochrome c prime, subgroup AL504_RS10460 95f3a2997b70c5552ec79852cd73d2f0 152 Pfam PF01322 Cytochrome C' 32 149 6.3E-37 T 28-03-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AL504_RS10460 95f3a2997b70c5552ec79852cd73d2f0 152 Gene3D G3DSA:1.20.120.10 26 152 3.9E-40 T 28-03-2018 AL504_RS26335 acdd9b482e40f3753e78e88cd5bb48dc 346 Pfam PF13379 NMT1-like family 33 271 4.7E-29 T 28-03-2018 AL504_RS26335 acdd9b482e40f3753e78e88cd5bb48dc 346 SUPERFAMILY SSF53850 33 282 9.37E-45 T 28-03-2018 AL504_RS26335 acdd9b482e40f3753e78e88cd5bb48dc 346 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 19 0.001 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL504_RS26335 acdd9b482e40f3753e78e88cd5bb48dc 346 Gene3D G3DSA:3.40.190.10 30 137 7.4E-14 T 28-03-2018 AL504_RS26335 acdd9b482e40f3753e78e88cd5bb48dc 346 SMART SM00062 34 267 0.0099 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS26335 acdd9b482e40f3753e78e88cd5bb48dc 346 Gene3D G3DSA:3.40.190.10 138 340 2.5E-33 T 28-03-2018 AL504_RS07530 abedbbcbb6138863043365cf1ba4dfbe 141 Pfam PF03918 Cytochrome C biogenesis protein 6 136 1.7E-47 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL504_RS30290 8cec1fd5784fb9650fc105f5b5e6eb8b 257 Pfam PF01925 Sulfite exporter TauE/SafE 10 251 5.3E-45 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS20415 49b6c5cdead464047e5c43f8a901f775 370 Gene3D G3DSA:3.40.50.2000 163 342 1.2E-41 T 28-03-2018 AL504_RS20415 49b6c5cdead464047e5c43f8a901f775 370 SUPERFAMILY SSF53756 13 360 2.28E-68 T 28-03-2018 AL504_RS20415 49b6c5cdead464047e5c43f8a901f775 370 Pfam PF00534 Glycosyl transferases group 1 172 336 8.3E-38 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS20415 49b6c5cdead464047e5c43f8a901f775 370 Pfam PF13477 Glycosyl transferase 4-like 2 132 4.6E-30 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS20415 49b6c5cdead464047e5c43f8a901f775 370 Gene3D G3DSA:3.40.50.2000 3 162 5.6E-13 T 28-03-2018 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 Gene3D G3DSA:1.10.287.80 5 158 5.9E-43 T 28-03-2018 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 SUPERFAMILY SSF52943 3 301 2.09E-88 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 Gene3D G3DSA:1.10.287.80 159 254 1.1E-21 T 28-03-2018 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 Gene3D G3DSA:1.10.287.80 255 296 9.1E-13 T 28-03-2018 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 301 1.0E-95 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 Pfam PF00231 ATP synthase 4 300 3.4E-89 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 287 300 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 PRINTS PR00126 ATP synthase gamma subunit signature 279 300 1.0E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 PRINTS PR00126 ATP synthase gamma subunit signature 248 267 1.0E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.0E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.0E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16920 4d6daabe58e6746f734ba6719aa7e89b 301 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 301 34.247 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 Pfam PF00175 Oxidoreductase NAD-binding domain 121 241 8.4E-9 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 SUPERFAMILY SSF63380 7 108 6.45E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 PRINTS PR00410 Phenol hydroxylase reductase family signature 120 139 6.2E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 154 6.2E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 6.2E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 SUPERFAMILY SSF52343 113 266 2.49E-30 T 28-03-2018 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 Gene3D G3DSA:2.40.30.10 1 105 8.4E-15 T 28-03-2018 AL504_RS12290 bcdd13694071460b5c1cfb29023621d6 266 Gene3D G3DSA:3.40.50.80 107 266 3.6E-23 T 28-03-2018 AL504_RS01050 721c0616a1c23c4d6eb235e2ae12c217 507 SUPERFAMILY SSF75304 6 461 4.84E-127 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS01050 721c0616a1c23c4d6eb235e2ae12c217 507 Gene3D G3DSA:3.90.1300.10 3 479 1.4E-125 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS01050 721c0616a1c23c4d6eb235e2ae12c217 507 Pfam PF01425 Amidase 28 452 3.9E-95 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS11905 2e29e656cbc8f6a9a6aa4e0f9aaa30a2 306 SUPERFAMILY SSF161098 94 289 1.96E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS11905 2e29e656cbc8f6a9a6aa4e0f9aaa30a2 306 Gene3D G3DSA:1.10.3720.10 3 293 6.8E-49 T 28-03-2018 AL504_RS11905 2e29e656cbc8f6a9a6aa4e0f9aaa30a2 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.3E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS30220 ee88741051a402bc10f243955a36a71c 443 Gene3D G3DSA:3.50.50.60 1 443 2.6E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS30220 ee88741051a402bc10f243955a36a71c 443 Pfam PF01593 Flavin containing amine oxidoreductase 11 435 5.8E-27 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL504_RS30220 ee88741051a402bc10f243955a36a71c 443 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 4 434 1.3E-111 T 28-03-2018 IPR017830 Squalene-associated FAD-dependent desaturase AL504_RS30220 ee88741051a402bc10f243955a36a71c 443 SUPERFAMILY SSF51905 396 435 1.07E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS30220 ee88741051a402bc10f243955a36a71c 443 SUPERFAMILY SSF51905 2 300 1.07E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07930 405d0f811d822d8e2279de2083eef5a6 313 PIRSF PIRSF037442 1 290 9.2E-103 T 28-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AL504_RS07930 405d0f811d822d8e2279de2083eef5a6 313 Pfam PF12146 Serine aminopeptidase, S33 32 148 2.7E-14 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS07930 405d0f811d822d8e2279de2083eef5a6 313 SUPERFAMILY SSF53474 2 284 5.87E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS07930 405d0f811d822d8e2279de2083eef5a6 313 Gene3D G3DSA:3.40.50.1820 1 293 7.8E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24480 81111125e77ba83d2b7103dbd8926250 116 PIRSF PIRSF028139 4 116 5.5E-37 T 28-03-2018 IPR014980 Dopa 4,5-dioxygenase AL504_RS24480 81111125e77ba83d2b7103dbd8926250 116 Gene3D G3DSA:3.30.70.1240 3 114 7.5E-40 T 28-03-2018 IPR023389 DOPA-like domain AL504_RS24480 81111125e77ba83d2b7103dbd8926250 116 SUPERFAMILY SSF143410 6 113 1.09E-41 T 28-03-2018 IPR023389 DOPA-like domain AL504_RS24480 81111125e77ba83d2b7103dbd8926250 116 Pfam PF08883 Dopa 4,5-dioxygenase family 11 111 2.0E-32 T 28-03-2018 IPR014980 Dopa 4,5-dioxygenase AL504_RS30555 45e2c1f4ac22801f69af1bb452bd57fe 492 SUPERFAMILY SSF56954 11 476 8.37E-95 T 28-03-2018 AL504_RS30555 45e2c1f4ac22801f69af1bb452bd57fe 492 Pfam PF02321 Outer membrane efflux protein 73 250 3.5E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS30555 45e2c1f4ac22801f69af1bb452bd57fe 492 Pfam PF02321 Outer membrane efflux protein 288 471 8.9E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS30555 45e2c1f4ac22801f69af1bb452bd57fe 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 22 473 1.6E-100 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS30555 45e2c1f4ac22801f69af1bb452bd57fe 492 Gene3D G3DSA:1.20.1600.10 28 478 2.7E-84 T 28-03-2018 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 Gene3D G3DSA:1.20.210.10 43 561 7.9E-187 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 28-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 Gene3D G3DSA:1.10.287.70 573 640 1.9E-16 T 28-03-2018 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 SUPERFAMILY SSF81442 43 558 3.79E-179 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 7.1E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25010 5869675a5c7a883e94578351c681a59d 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 4.9E-138 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS19955 a294f1c237d40651ec43daa5a175cb15 106 SUPERFAMILY SSF50104 3 100 1.35E-28 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL504_RS19955 a294f1c237d40651ec43daa5a175cb15 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 19.192 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19955 a294f1c237d40651ec43daa5a175cb15 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19955 a294f1c237d40651ec43daa5a175cb15 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 8.0E-23 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19955 a294f1c237d40651ec43daa5a175cb15 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 101 1.5E-30 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19955 a294f1c237d40651ec43daa5a175cb15 106 Gene3D G3DSA:2.30.30.30 2 92 6.3E-27 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL504_RS04665 3945c99c94e974456cd0e0a2a50933a6 638 SUPERFAMILY SSF48452 66 330 8.01E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04665 3945c99c94e974456cd0e0a2a50933a6 638 Gene3D G3DSA:1.25.40.10 20 144 3.0E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04665 3945c99c94e974456cd0e0a2a50933a6 638 Gene3D G3DSA:1.25.40.10 241 322 1.6E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04665 3945c99c94e974456cd0e0a2a50933a6 638 Gene3D G3DSA:1.25.40.10 323 413 0.0016 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS04665 3945c99c94e974456cd0e0a2a50933a6 638 Gene3D G3DSA:1.25.40.10 145 240 0.012 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS20995 3e37db5710dfb46ef0eb6da0023bcbd9 294 PIRSF PIRSF038471 7 288 2.7E-71 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL504_RS20995 3e37db5710dfb46ef0eb6da0023bcbd9 294 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 10 282 2.7E-55 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL504_RS20995 3e37db5710dfb46ef0eb6da0023bcbd9 294 Pfam PF04085 rod shape-determining protein MreC 128 274 2.5E-36 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 471 7.0E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 SMART SM00388 253 318 7.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 Gene3D G3DSA:1.10.287.130 244 314 2.3E-10 T 28-03-2018 AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 315 1.5E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 SUPERFAMILY SSF47384 236 316 1.18E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 SMART SM00387 369 486 4.7E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 Pfam PF08521 Two-component sensor kinase N-terminal 19 172 2.5E-32 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 SUPERFAMILY SSF55874 312 483 2.49E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 Gene3D G3DSA:3.30.565.10 322 490 2.0E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 7.6E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 7.6E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS14960 c12046537549b7dbacdf5bf63c153c94 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 7.6E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00885 5aff098a49820b3cd8b99d868a8190a9 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 179 4.2E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00885 5aff098a49820b3cd8b99d868a8190a9 731 Pfam PF00593 TonB dependent receptor 293 730 3.5E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00885 5aff098a49820b3cd8b99d868a8190a9 731 SUPERFAMILY SSF56935 37 731 2.51E-123 T 28-03-2018 AL504_RS00885 5aff098a49820b3cd8b99d868a8190a9 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 730 2.0E-109 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS00885 5aff098a49820b3cd8b99d868a8190a9 731 Gene3D G3DSA:2.170.130.10 36 189 3.1E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00885 5aff098a49820b3cd8b99d868a8190a9 731 Gene3D G3DSA:2.40.170.20 192 731 3.0E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 SUPERFAMILY SSF52540 10 76 1.26E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 SUPERFAMILY SSF52540 111 170 1.26E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 SUPERFAMILY SSF52540 348 640 1.26E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 SUPERFAMILY SSF52540 721 864 1.26E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 SUPERFAMILY SSF52540 898 924 1.26E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1020 1174 2.7E-6 T 28-03-2018 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 461 9.5E-43 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 Gene3D G3DSA:3.90.320.10 933 1181 9.5E-12 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 Gene3D G3DSA:3.40.50.300 6 467 2.8E-43 T 28-03-2018 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 Pfam PF13361 UvrD-like helicase C-terminal domain 820 918 2.4E-12 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 Pfam PF13361 UvrD-like helicase C-terminal domain 474 641 6.2E-7 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 Gene3D G3DSA:3.40.50.300 469 932 4.1E-31 T 28-03-2018 AL504_RS26290 160ba4e2f93946f7ce2f6812c7d58e23 1194 SUPERFAMILY SSF52980 1020 1169 9.65E-9 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 Gene3D G3DSA:3.50.50.60 165 346 1.1E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 118 126 1.3E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 302 320 1.3E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 67 77 1.3E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.3E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 Pfam PF04324 BFD-like [2Fe-2S] binding domain 384 436 2.7E-8 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PIRSF PIRSF037495 1 474 1.2E-160 T 28-03-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 SUPERFAMILY SSF51905 4 337 3.11E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 Gene3D G3DSA:3.50.50.60 131 164 5.3E-4 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 Gene3D G3DSA:3.40.50.720 2 130 2.2E-14 T 28-03-2018 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.6E-14 T 28-03-2018 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 117 135 7.6E-14 T 28-03-2018 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 7.6E-14 T 28-03-2018 AL504_RS19135 7d18a569eae4e0d7b682f2f78af64ac9 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 329 4.0E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23675 491b9ee9ced43b1c2e7db7559eccc23c 420 Pfam PF07690 Major Facilitator Superfamily 19 338 4.6E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS23675 491b9ee9ced43b1c2e7db7559eccc23c 420 Gene3D G3DSA:1.20.1250.20 207 399 1.3E-15 T 28-03-2018 AL504_RS23675 491b9ee9ced43b1c2e7db7559eccc23c 420 Gene3D G3DSA:1.20.1250.20 8 195 2.1E-15 T 28-03-2018 AL504_RS23675 491b9ee9ced43b1c2e7db7559eccc23c 420 SUPERFAMILY SSF103473 12 397 1.57E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS07280 f00f0d21ce4d719a41122bf672fd671f 234 SUPERFAMILY SSF52317 2 182 4.59E-52 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS07280 f00f0d21ce4d719a41122bf672fd671f 234 Pfam PF01965 DJ-1/PfpI family 3 162 9.7E-30 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS07280 f00f0d21ce4d719a41122bf672fd671f 234 Gene3D G3DSA:3.40.50.880 1 230 1.6E-61 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS30185 3648acab36d72d4e0183fde4c3d54708 276 Gene3D G3DSA:3.20.20.70 4 252 7.0E-128 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS30185 3648acab36d72d4e0183fde4c3d54708 276 Gene3D G3DSA:1.20.5.460 253 274 2.4E-11 T 28-03-2018 AL504_RS30185 3648acab36d72d4e0183fde4c3d54708 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 3.9E-133 T 28-03-2018 IPR009215 TIM-barrel domain, IGPS-like AL504_RS30185 3648acab36d72d4e0183fde4c3d54708 276 SUPERFAMILY SSF51621 3 197 6.59E-86 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS30185 3648acab36d72d4e0183fde4c3d54708 276 PIRSF PIRSF034452 1 276 4.6E-154 T 28-03-2018 IPR009215 TIM-barrel domain, IGPS-like AL504_RS07080 3681344b78aa18bae47b11909998b1ae 459 SUPERFAMILY SSF75304 23 453 8.9E-120 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS07080 3681344b78aa18bae47b11909998b1ae 459 Gene3D G3DSA:3.90.1300.10 22 455 2.1E-124 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS07080 3681344b78aa18bae47b11909998b1ae 459 Pfam PF01425 Amidase 40 247 2.5E-82 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS07080 3681344b78aa18bae47b11909998b1ae 459 Pfam PF01425 Amidase 343 447 1.0E-16 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Gene3D G3DSA:3.40.50.620 232 389 7.1E-12 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Pfam PF00512 His Kinase A (phospho-acceptor) domain 697 762 3.4E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 SUPERFAMILY SSF52402 258 360 2.34E-6 T 28-03-2018 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 SMART SM00387 807 919 6.2E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Gene3D G3DSA:3.30.565.10 758 919 3.3E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Pfam PF13493 Domain of unknown function (DUF4118) 434 539 1.0E-28 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 SUPERFAMILY SSF55874 753 920 3.27E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Gene3D G3DSA:3.40.50.300 26 157 1.3E-20 T 28-03-2018 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Gene3D G3DSA:1.20.120.620 433 531 2.1E-26 T 28-03-2018 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 811 918 8.4E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 SUPERFAMILY SSF55781 545 689 2.12E-6 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 SMART SM00388 696 763 3.5E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 SUPERFAMILY SSF47384 691 763 2.55E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 903 916 5.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 858 5.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 895 5.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 862 872 5.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Pfam PF13492 GAF domain 577 677 1.8E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Gene3D G3DSA:3.30.450.40 532 687 2.5E-8 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 27 235 4.2E-92 T 28-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AL504_RS13335 1c8a425098757e7897a58b5381af0185 928 Gene3D G3DSA:1.10.287.130 688 757 9.4E-15 T 28-03-2018 AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 Gene3D G3DSA:1.20.120.530 85 252 2.1E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 SUPERFAMILY SSF48008 93 240 2.56E-16 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 Pfam PF07729 FCD domain 100 233 6.4E-19 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 88 1.1E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 SMART SM00895 98 234 1.6E-7 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 Gene3D G3DSA:1.10.10.10 3 84 7.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 SUPERFAMILY SSF46785 23 97 1.09E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16685 ed74ae64b1313ce6e3cdc2e1b1138aea 253 SMART SM00345 30 88 2.0E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 SMART SM00267 97 272 2.0E-61 T 28-03-2018 IPR000160 GGDEF domain AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 Gene3D G3DSA:3.30.70.270 107 280 5.2E-58 T 28-03-2018 AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 Gene3D G3DSA:3.30.450.20 1 106 9.7E-14 T 28-03-2018 AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 SUPERFAMILY SSF55785 3 105 1.92E-11 T 28-03-2018 IPR000014 PAS domain AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 104 271 6.6E-36 T 28-03-2018 IPR000160 GGDEF domain AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 SUPERFAMILY SSF55073 113 273 3.84E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 SMART SM00052 282 528 1.3E-99 T 28-03-2018 IPR001633 EAL domain AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 Pfam PF08448 PAS fold 2 98 7.5E-10 T 28-03-2018 IPR013656 PAS fold-4 AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 108 266 1.1E-41 T 28-03-2018 IPR000160 GGDEF domain AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 Gene3D G3DSA:3.20.20.450 281 538 9.2E-88 T 28-03-2018 IPR001633 EAL domain AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 SUPERFAMILY SSF141868 288 535 1.7E-79 T 28-03-2018 IPR001633 EAL domain AL504_RS29850 47c4f73be151fcf4aa4da6e5e567bff8 538 Pfam PF00563 EAL domain 289 522 1.9E-66 T 28-03-2018 IPR001633 EAL domain AL504_RS26825 bf6cc3d94e12e90fce523913a5549b94 260 SUPERFAMILY SSF56529 13 257 2.14E-40 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS26825 bf6cc3d94e12e90fce523913a5549b94 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 66 249 1.3E-7 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS26825 bf6cc3d94e12e90fce523913a5549b94 260 Gene3D G3DSA:3.90.850.10 9 257 3.9E-21 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 Gene3D G3DSA:3.30.420.150 122 302 1.8E-35 T 28-03-2018 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 5 303 2.1E-99 T 28-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 SUPERFAMILY SSF53067 134 305 1.3E-42 T 28-03-2018 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 Gene3D G3DSA:3.30.420.40 1 121 3.8E-40 T 28-03-2018 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 SUPERFAMILY SSF109604 310 491 1.26E-40 T 28-03-2018 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 Pfam PF02541 Ppx/GppA phosphatase family 28 304 6.4E-77 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 PIRSF PIRSF001267 1 494 1.4E-189 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL504_RS26475 598330b4ad200a379a4aef1d8867cd9d 495 SUPERFAMILY SSF53067 5 130 6.48E-35 T 28-03-2018 AL504_RS06280 bce4a81a9f8e31ef631a3f2f135781be 462 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 223 444 2.0E-49 T 28-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AL504_RS06280 bce4a81a9f8e31ef631a3f2f135781be 462 Pfam PF07196 Flagellin hook IN motif 135 183 1.1E-7 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL504_RS06280 bce4a81a9f8e31ef631a3f2f135781be 462 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 108 4.8E-15 T 28-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AL504_RS04870 b031651846a38a1aa1c1b622396a8275 498 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 26 181 1.1E-53 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AL504_RS04870 b031651846a38a1aa1c1b622396a8275 498 Pfam PF01048 Phosphorylase superfamily 276 443 2.0E-13 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL504_RS04870 b031651846a38a1aa1c1b622396a8275 498 Hamap MF_01932 AMP nucleosidase [amn]. 17 498 61.769 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AL504_RS04870 b031651846a38a1aa1c1b622396a8275 498 SUPERFAMILY SSF53167 23 498 1.7E-153 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL504_RS04870 b031651846a38a1aa1c1b622396a8275 498 Gene3D G3DSA:3.40.50.1580 188 480 1.5E-64 T 28-03-2018 AL504_RS04870 b031651846a38a1aa1c1b622396a8275 498 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 26 498 1.3E-211 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AL504_RS04870 b031651846a38a1aa1c1b622396a8275 498 Gene3D G3DSA:3.30.1730.10 20 182 5.4E-56 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AL504_RS15555 d4241a1425e91c097f68d2cf28fb3eea 416 Pfam PF00464 Serine hydroxymethyltransferase 8 382 2.5E-171 T 28-03-2018 AL504_RS15555 d4241a1425e91c097f68d2cf28fb3eea 416 Gene3D G3DSA:3.40.640.10 37 272 4.9E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS15555 d4241a1425e91c097f68d2cf28fb3eea 416 Gene3D G3DSA:3.90.1150.10 273 412 2.2E-61 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS15555 d4241a1425e91c097f68d2cf28fb3eea 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 52.035 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL504_RS15555 d4241a1425e91c097f68d2cf28fb3eea 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL504_RS15555 d4241a1425e91c097f68d2cf28fb3eea 416 SUPERFAMILY SSF53383 8 414 5.5E-179 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS15555 d4241a1425e91c097f68d2cf28fb3eea 416 PIRSF PIRSF000412 1 416 4.4E-165 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 Gene3D G3DSA:3.40.50.720 8 237 1.1E-56 T 28-03-2018 AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 140 0.0051 T 28-03-2018 AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 SUPERFAMILY SSF51735 6 228 6.07E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.1E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.1E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.1E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.1E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.1E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24775 2a1a6cb2379e7e329957690fbffe6222 244 Pfam PF00106 short chain dehydrogenase 9 191 2.1E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS17370 b29266e4d23ecaa14b33f1033ea3a24f 145 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-16 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS17370 b29266e4d23ecaa14b33f1033ea3a24f 145 PRINTS PR01438 Universal stress protein signature 105 117 1.4E-16 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS17370 b29266e4d23ecaa14b33f1033ea3a24f 145 PRINTS PR01438 Universal stress protein signature 123 145 1.4E-16 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS17370 b29266e4d23ecaa14b33f1033ea3a24f 145 Gene3D G3DSA:3.40.50.620 1 145 5.1E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS17370 b29266e4d23ecaa14b33f1033ea3a24f 145 PIRSF PIRSF006276 1 145 2.5E-20 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS17370 b29266e4d23ecaa14b33f1033ea3a24f 145 SUPERFAMILY SSF52402 1 145 1.59E-34 T 28-03-2018 AL504_RS17370 b29266e4d23ecaa14b33f1033ea3a24f 145 Pfam PF00582 Universal stress protein family 1 145 7.1E-32 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS26785 4a43fd32419c58fd9af60375efe2ec65 131 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 129 27.725 T 28-03-2018 IPR023006 Uncharacterised protein family UPF0225 AL504_RS26785 4a43fd32419c58fd9af60375efe2ec65 131 Gene3D G3DSA:3.10.450.50 7 131 1.1E-43 T 28-03-2018 AL504_RS26785 4a43fd32419c58fd9af60375efe2ec65 131 SUPERFAMILY SSF54427 32 129 4.34E-33 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS25230 c57bdad8c4d6700ceb9d3e402292a9c1 142 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 1.5E-45 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AL504_RS25230 c57bdad8c4d6700ceb9d3e402292a9c1 142 Pfam PF03960 ArsC family 7 114 3.3E-15 T 28-03-2018 IPR006660 Arsenate reductase-like AL504_RS25230 c57bdad8c4d6700ceb9d3e402292a9c1 142 SUPERFAMILY SSF52833 3 138 2.24E-40 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25230 c57bdad8c4d6700ceb9d3e402292a9c1 142 Gene3D G3DSA:3.40.30.10 1 141 6.1E-44 T 28-03-2018 AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 Pfam PF08402 TOBE domain 283 355 4.6E-10 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 Pfam PF00005 ABC transporter 19 161 2.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 Gene3D G3DSA:2.40.50.140 283 349 7.9E-4 T 28-03-2018 AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 SUPERFAMILY SSF50331 252 356 4.68E-8 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 Gene3D G3DSA:3.40.50.300 1 239 2.0E-76 T 28-03-2018 AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 SUPERFAMILY SSF52540 4 242 4.37E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05070 b083d82cf49008bd65a045b375cbcc63 358 SMART SM00382 28 211 2.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 Pfam PF00366 Ribosomal protein S17 18 84 8.4E-31 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 13 88 24.491 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 14 84 6.7E-35 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 Gene3D G3DSA:2.40.50.140 11 92 8.6E-29 T 28-03-2018 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 SUPERFAMILY SSF50249 12 91 9.85E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 ProSitePatterns PS00056 Ribosomal protein S17 signature. 64 76 - T 28-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 13 84 6.0E-36 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 PRINTS PR00973 Ribosomal protein S17 family signature 32 55 6.8E-10 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 PRINTS PR00973 Ribosomal protein S17 family signature 74 81 6.8E-10 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19745 4d26bbfe1fbf0f5afec5a7a97d7aa594 93 PRINTS PR00973 Ribosomal protein S17 family signature 64 74 6.8E-10 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 Gene3D G3DSA:3.40.50.720 60 264 1.9E-51 T 28-03-2018 AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 Gene3D G3DSA:3.40.50.720 13 59 2.3E-8 T 28-03-2018 AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 SUPERFAMILY SSF51735 20 260 3.77E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 260 9.4E-53 T 28-03-2018 AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 1.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 5.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 5.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22200 728b27b0f247cd048edbcafafecb4db9 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 5.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10885 0053327ec45c5f05c7eb3f93cf8630e2 107 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 95 2.6E-29 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL504_RS10885 0053327ec45c5f05c7eb3f93cf8630e2 107 SUPERFAMILY SSF50249 1 97 2.63E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS10885 0053327ec45c5f05c7eb3f93cf8630e2 107 Hamap MF_00720 Primosomal replication protein N [priB]. 1 96 22.404 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL504_RS10885 0053327ec45c5f05c7eb3f93cf8630e2 107 Gene3D G3DSA:2.40.50.140 1 104 5.9E-6 T 28-03-2018 AL504_RS10885 0053327ec45c5f05c7eb3f93cf8630e2 107 PIRSF PIRSF003135 1 97 4.3E-13 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL504_RS23780 414ece75c4acea22b84e3f540f6827dc 285 Gene3D G3DSA:3.40.50.1820 41 247 7.0E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23780 414ece75c4acea22b84e3f540f6827dc 285 Pfam PF07859 alpha/beta hydrolase fold 60 156 2.2E-17 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AL504_RS23780 414ece75c4acea22b84e3f540f6827dc 285 SUPERFAMILY SSF53474 34 271 1.66E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 Gene3D G3DSA:3.40.190.10 91 189 1.6E-18 T 28-03-2018 AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 Gene3D G3DSA:1.10.10.10 3 90 2.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 SUPERFAMILY SSF46785 7 114 5.44E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 Pfam PF03466 LysR substrate binding domain 96 282 3.5E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 SUPERFAMILY SSF53850 95 283 9.77E-26 T 28-03-2018 AL504_RS03625 90ecbf7d8934838653fde3c194b032bf 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.6E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 Gene3D G3DSA:1.10.10.10 2 89 1.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 Gene3D G3DSA:3.40.190.10 90 175 3.5E-14 T 28-03-2018 AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 SUPERFAMILY SSF46785 7 113 1.48E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 Gene3D G3DSA:3.40.190.10 176 262 1.9E-12 T 28-03-2018 AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 Pfam PF03466 LysR substrate binding domain 90 292 1.7E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07920 21620524d66798e56d8e093bfe081d6d 294 SUPERFAMILY SSF53850 82 293 1.03E-33 T 28-03-2018 AL504_RS03285 9eda62ce755d9e548a4c1bd6a70bac36 352 Gene3D G3DSA:3.40.50.1980 34 174 1.8E-30 T 28-03-2018 AL504_RS03285 9eda62ce755d9e548a4c1bd6a70bac36 352 Pfam PF01497 Periplasmic binding protein 66 310 1.6E-17 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS03285 9eda62ce755d9e548a4c1bd6a70bac36 352 Gene3D G3DSA:3.40.50.1980 175 346 1.1E-24 T 28-03-2018 AL504_RS03285 9eda62ce755d9e548a4c1bd6a70bac36 352 SUPERFAMILY SSF53807 48 337 1.41E-43 T 28-03-2018 AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 Pfam PF03471 Transporter associated domain 439 516 2.9E-15 T 28-03-2018 IPR005170 Transporter-associated domain AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 Gene3D G3DSA:3.10.580.10 287 434 1.8E-22 T 28-03-2018 AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 Pfam PF03741 Integral membrane protein TerC family 17 206 5.7E-49 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 SMART SM01091 438 518 3.0E-18 T 28-03-2018 IPR005170 Transporter-associated domain AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 SUPERFAMILY SSF56176 436 516 2.21E-15 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 SUPERFAMILY SSF54631 294 426 6.81E-21 T 28-03-2018 AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 Gene3D G3DSA:3.30.465.10 435 521 8.6E-16 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS04215 c8e94e065fe2e53eea1559262f55955b 521 Pfam PF00571 CBS domain 374 424 2.3E-6 T 28-03-2018 IPR000644 CBS domain AL504_RS24910 477ab6174620b0f42a0042ba6bb1ddba 300 SUPERFAMILY SSF53474 6 292 7.88E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24910 477ab6174620b0f42a0042ba6bb1ddba 300 Gene3D G3DSA:3.40.50.1820 3 298 7.5E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24910 477ab6174620b0f42a0042ba6bb1ddba 300 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.0E-16 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS24910 477ab6174620b0f42a0042ba6bb1ddba 300 PRINTS PR00412 Epoxide hydrolase signature 270 292 1.0E-16 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS24910 477ab6174620b0f42a0042ba6bb1ddba 300 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.0E-16 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS24910 477ab6174620b0f42a0042ba6bb1ddba 300 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.0E-16 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS24910 477ab6174620b0f42a0042ba6bb1ddba 300 Pfam PF12697 Alpha/beta hydrolase family 28 288 4.3E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS01035 2fdf7aeed748ff2928e95184eafc426e 202 Gene3D G3DSA:1.20.1260.10 3 173 8.3E-23 T 28-03-2018 IPR012347 Ferritin-related AL504_RS01035 2fdf7aeed748ff2928e95184eafc426e 202 SUPERFAMILY SSF47240 9 82 1.87E-7 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS04750 dec7f58fffec6059d6de660e4a0cb026 323 SUPERFAMILY SSF53850 110 278 1.09E-13 T 28-03-2018 AL504_RS04750 dec7f58fffec6059d6de660e4a0cb026 323 PIRSF PIRSF017082 1 322 2.3E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04750 dec7f58fffec6059d6de660e4a0cb026 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 320 1.1E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04750 dec7f58fffec6059d6de660e4a0cb026 323 Gene3D G3DSA:3.40.190.10 125 232 1.2E-12 T 28-03-2018 AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 SUPERFAMILY SSF51735 3 243 3.64E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 240 1.2E-42 T 28-03-2018 AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.4E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.4E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.4E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.4E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.4E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.4E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05705 f51a3fa6adeb9ab4e76a82e9f610d0c0 244 Gene3D G3DSA:3.40.50.720 1 244 1.4E-56 T 28-03-2018 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 Gene3D G3DSA:2.102.10.10 37 144 1.0E-14 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 SUPERFAMILY SSF55961 168 379 1.88E-42 T 28-03-2018 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 SUPERFAMILY SSF50022 7 156 7.86E-29 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 177 378 2.0E-34 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 Gene3D G3DSA:3.90.380.10 145 384 8.9E-33 T 28-03-2018 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 Pfam PF00355 Rieske [2Fe-2S] domain 41 136 1.6E-9 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 74 94 4.0E-6 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS03305 b26c3bd33ef00f91f6c796efd66fc1a1 388 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 4.0E-6 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 Pfam PF00355 Rieske [2Fe-2S] domain 42 126 1.8E-19 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 SUPERFAMILY SSF55961 162 436 2.2E-56 T 28-03-2018 AL504_RS13910 e904199df00599239e4ca8586af29187 437 Gene3D G3DSA:3.90.380.10 152 437 2.0E-62 T 28-03-2018 AL504_RS13910 e904199df00599239e4ca8586af29187 437 Gene3D G3DSA:2.102.10.10 40 151 1.5E-23 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 197 434 2.1E-13 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 4.1E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 146 172 4.1E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 4.1E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 188 210 4.1E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 4.1E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 4.1E-34 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS13910 e904199df00599239e4ca8586af29187 437 SUPERFAMILY SSF50022 10 161 3.27E-42 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS19035 162b39487011885ded4b19c0142872eb 175 SMART SM00317 9 130 4.4E-27 T 28-03-2018 IPR001214 SET domain GO:0005515 AL504_RS19035 162b39487011885ded4b19c0142872eb 175 SUPERFAMILY SSF82199 8 150 1.57E-40 T 28-03-2018 AL504_RS19035 162b39487011885ded4b19c0142872eb 175 Gene3D G3DSA:2.170.270.10 5 153 3.2E-40 T 28-03-2018 AL504_RS19035 162b39487011885ded4b19c0142872eb 175 Pfam PF00856 SET domain 21 124 2.0E-17 T 28-03-2018 IPR001214 SET domain GO:0005515 AL504_RS16045 61861c5d0274cb3e54b971b894401153 125 Pfam PF09345 Domain of unknown function (DUF1987) 6 122 1.2E-38 T 28-03-2018 IPR018530 Domain of unknown function DUF1987 AL504_RS29515 9521465d20bce6a2498816373c855e54 256 SMART SM00342 170 252 8.0E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS29515 9521465d20bce6a2498816373c855e54 256 Gene3D G3DSA:1.10.10.60 208 256 5.2E-9 T 28-03-2018 AL504_RS29515 9521465d20bce6a2498816373c855e54 256 Pfam PF12833 Helix-turn-helix domain 176 254 8.5E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS29515 9521465d20bce6a2498816373c855e54 256 Pfam PF02311 AraC-like ligand binding domain 24 105 2.0E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS29515 9521465d20bce6a2498816373c855e54 256 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 205 248 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS29515 9521465d20bce6a2498816373c855e54 256 Gene3D G3DSA:2.60.120.10 5 79 2.9E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS29515 9521465d20bce6a2498816373c855e54 256 Gene3D G3DSA:1.10.10.60 80 207 2.7E-10 T 28-03-2018 AL504_RS29515 9521465d20bce6a2498816373c855e54 256 SUPERFAMILY SSF51182 13 197 3.76E-19 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS29515 9521465d20bce6a2498816373c855e54 256 SUPERFAMILY SSF46689 210 254 4.48E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 325 332 - T 28-03-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 Gene3D G3DSA:3.90.770.10 136 375 1.6E-61 T 28-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 Gene3D G3DSA:3.90.770.10 4 135 1.1E-24 T 28-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 50 71 3.5E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 77 97 3.5E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 313 334 3.5E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 174 192 3.5E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 16 386 1.3E-113 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 ProSitePatterns PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1. 176 190 - T 28-03-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 371 384 - T 28-03-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 SUPERFAMILY SSF55035 111 219 2.62E-31 T 28-03-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 SUPERFAMILY SSF56542 229 427 4.19E-105 T 28-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 SUPERFAMILY SSF56542 7 119 4.19E-105 T 28-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL504_RS02585 fd0cdf19135075ab44962cb974b4778c 429 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 4 386 1.6E-125 T 28-03-2018 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 0.0081 T 28-03-2018 AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 7.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 7.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 7.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 Gene3D G3DSA:3.40.50.720 1 250 7.4E-55 T 28-03-2018 AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 SUPERFAMILY SSF51735 3 247 1.26E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS30365 5751da32d43ee550f3cf0e61f5fbb1c8 252 Pfam PF00106 short chain dehydrogenase 6 195 1.6E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS03970 e65469358be71d02638393f10ca87563 392 SUPERFAMILY SSF53383 41 389 1.38E-96 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03970 e65469358be71d02638393f10ca87563 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 24 388 1.6E-88 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03970 e65469358be71d02638393f10ca87563 392 Gene3D G3DSA:3.40.640.10 12 262 1.1E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS03970 e65469358be71d02638393f10ca87563 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03970 e65469358be71d02638393f10ca87563 392 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 27 390 4.2E-118 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL504_RS03970 e65469358be71d02638393f10ca87563 392 Gene3D G3DSA:3.90.1150.10 263 392 2.6E-32 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS03970 e65469358be71d02638393f10ca87563 392 PIRSF PIRSF001434 2 392 6.0E-113 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 Gene3D G3DSA:3.40.50.300 351 559 5.1E-19 T 28-03-2018 AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 Pfam PF13638 PIN domain 112 256 8.6E-40 T 28-03-2018 IPR002716 PIN domain AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 SUPERFAMILY SSF88723 110 171 2.35E-11 T 28-03-2018 IPR029060 PIN domain-like AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 SUPERFAMILY SSF88723 207 258 2.35E-11 T 28-03-2018 IPR029060 PIN domain-like AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 SMART SM00670 110 244 4.8E-13 T 28-03-2018 IPR002716 PIN domain AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 Gene3D G3DSA:3.40.50.1010 109 350 1.1E-42 T 28-03-2018 IPR029060 PIN domain-like AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 Pfam PF02562 PhoH-like protein 352 554 1.1E-52 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 SUPERFAMILY SSF52540 233 288 1.8E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10595 1c26d0e5815f69abc19162edd1ad6b72 566 SUPERFAMILY SSF52540 351 544 1.8E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15575 f299cfbc49050ff0a296a0f735b484d3 469 Pfam PF01551 Peptidase family M23 323 419 1.9E-34 T 28-03-2018 IPR016047 Peptidase M23 AL504_RS15575 f299cfbc49050ff0a296a0f735b484d3 469 Gene3D G3DSA:2.70.70.10 276 422 1.4E-41 T 28-03-2018 AL504_RS15575 f299cfbc49050ff0a296a0f735b484d3 469 SUPERFAMILY SSF51261 169 421 1.46E-73 T 28-03-2018 IPR011055 Duplicated hybrid motif AL504_RS10960 7c031457a4c0b4aea91446178d295be1 376 SUPERFAMILY SSF52540 28 267 1.69E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10960 7c031457a4c0b4aea91446178d295be1 376 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 27 376 3.8E-155 T 28-03-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 AL504_RS10960 7c031457a4c0b4aea91446178d295be1 376 SMART SM00382 52 235 2.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS10960 7c031457a4c0b4aea91446178d295be1 376 Pfam PF00005 ABC transporter 43 185 2.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS10960 7c031457a4c0b4aea91446178d295be1 376 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS10960 7c031457a4c0b4aea91446178d295be1 376 Gene3D G3DSA:3.40.50.300 26 311 1.2E-73 T 28-03-2018 AL504_RS00980 c23b1b1d813021473e9718e3ff8ca053 435 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 199 427 1.5E-57 T 28-03-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal AL504_RS00980 c23b1b1d813021473e9718e3ff8ca053 435 Gene3D G3DSA:3.40.50.1820 124 427 3.6E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00980 c23b1b1d813021473e9718e3ff8ca053 435 PIRSF PIRSF016521 1 434 1.3E-104 T 28-03-2018 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 AL504_RS00980 c23b1b1d813021473e9718e3ff8ca053 435 SUPERFAMILY SSF53474 63 254 3.51E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00980 c23b1b1d813021473e9718e3ff8ca053 435 SUPERFAMILY SSF53474 413 427 3.51E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00980 c23b1b1d813021473e9718e3ff8ca053 435 SUPERFAMILY SSF53474 287 384 3.51E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00980 c23b1b1d813021473e9718e3ff8ca053 435 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 15 134 2.9E-31 T 28-03-2018 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase AL504_RS12130 3f7ce3efd8b84d9fe12492e0075fcd12 169 SUPERFAMILY SSF89069 16 79 3.53E-13 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL504_RS12130 3f7ce3efd8b84d9fe12492e0075fcd12 169 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 17 80 2.0E-12 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL504_RS02235 51c69e9c5241ac9f85c9d07027d26f74 378 Pfam PF02618 YceG-like family 45 329 8.6E-75 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AL504_RS02235 51c69e9c5241ac9f85c9d07027d26f74 378 Gene3D G3DSA:3.30.160.60 304 336 9.1E-10 T 28-03-2018 AL504_RS02235 51c69e9c5241ac9f85c9d07027d26f74 378 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 332 4.2E-81 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AL504_RS02235 51c69e9c5241ac9f85c9d07027d26f74 378 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 14 336 31.409 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AL504_RS02235 51c69e9c5241ac9f85c9d07027d26f74 378 Gene3D G3DSA:3.30.160.60 76 110 0.0016 T 28-03-2018 AL504_RS26065 d0e282a44ec347eef9d595f04efb517a 340 SMART SM00062 35 265 1.9E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS26065 d0e282a44ec347eef9d595f04efb517a 340 Gene3D G3DSA:3.40.190.10 141 231 1.0E-17 T 28-03-2018 AL504_RS26065 d0e282a44ec347eef9d595f04efb517a 340 SUPERFAMILY SSF53850 26 260 6.26E-46 T 28-03-2018 AL504_RS26065 d0e282a44ec347eef9d595f04efb517a 340 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 255 2.0E-29 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS26065 d0e282a44ec347eef9d595f04efb517a 340 Gene3D G3DSA:3.40.190.10 25 140 1.3E-15 T 28-03-2018 AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 9.7E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 SUPERFAMILY SSF50129 1 137 3.96E-37 T 28-03-2018 IPR011032 GroES-like AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 SUPERFAMILY SSF51735 111 287 4.17E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 Pfam PF00107 Zinc-binding dehydrogenase 151 277 1.0E-31 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 Gene3D G3DSA:3.90.180.10 1 132 9.3E-36 T 28-03-2018 AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 325 3.0E-147 T 28-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 Gene3D G3DSA:3.40.50.720 133 309 7.5E-43 T 28-03-2018 AL504_RS13035 383ef9e43108e7dd50c54b4fc04bc7cf 325 SMART SM00829 10 323 7.2E-53 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 Gene3D G3DSA:2.60.120.10 19 91 1.2E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 SMART SM00342 181 263 1.3E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 Gene3D G3DSA:1.10.10.60 134 222 1.2E-8 T 28-03-2018 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 Pfam PF02311 AraC-like ligand binding domain 19 95 5.5E-14 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 Gene3D G3DSA:1.10.10.60 223 268 1.8E-11 T 28-03-2018 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 SUPERFAMILY SSF51215 26 147 9.15E-15 T 28-03-2018 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 259 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 Pfam PF12833 Helix-turn-helix domain 187 264 6.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07935 eaae09856778ee0129be124ad67ea233 272 SUPERFAMILY SSF46689 217 265 9.86E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS21735 31d31150552a4c546a2a4a1c896980c7 444 Pfam PF11299 Protein of unknown function (DUF3100) 31 270 6.6E-87 T 28-03-2018 IPR021450 Protein of unknown function DUF3100 AL504_RS28610 26b8f1ef361f2b750bddf9148c21bd09 163 Pfam PF07811 TadE-like protein 19 61 1.2E-9 T 28-03-2018 IPR012495 TadE-like AL504_RS06075 5be4f7d84f9f37e559745ec58cb83032 146 Pfam PF01957 NfeD-like C-terminal, partner-binding 3 138 3.8E-7 T 28-03-2018 IPR002810 NfeD-like, C-terminal domain AL504_RS06075 5be4f7d84f9f37e559745ec58cb83032 146 Gene3D G3DSA:2.40.50.140 83 138 6.1E-4 T 28-03-2018 AL504_RS03845 5b60f4c86596e50eec516443c3517e3a 139 Gene3D G3DSA:3.10.450.50 2 136 5.6E-17 T 28-03-2018 AL504_RS03845 5b60f4c86596e50eec516443c3517e3a 139 SUPERFAMILY SSF54427 1 134 1.53E-17 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS03845 5b60f4c86596e50eec516443c3517e3a 139 Pfam PF13577 SnoaL-like domain 12 128 1.6E-6 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS20865 866325c38ff6f68373e70f94f3720f46 354 Gene3D G3DSA:1.10.3470.10 36 334 3.0E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS20865 866325c38ff6f68373e70f94f3720f46 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 329 1.1E-29 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 Gene3D G3DSA:2.40.30.110 281 366 5.5E-21 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 Hamap MF_00259 Aminomethyltransferase [gcvT]. 4 359 43.299 T 28-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 PIRSF PIRSF006487 1 366 1.9E-81 T 28-03-2018 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 SUPERFAMILY SSF101790 281 361 4.25E-22 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 359 3.9E-121 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 Gene3D G3DSA:3.30.1360.120 5 136 2.7E-35 T 28-03-2018 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 Gene3D G3DSA:3.30.1360.120 137 236 5.0E-19 T 28-03-2018 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 258 1.9E-88 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 SUPERFAMILY SSF103025 5 277 1.26E-92 T 28-03-2018 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 353 1.5E-13 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL504_RS23000 fbdc5f8aedf2e103e6ae55946eede0a2 366 Gene3D G3DSA:4.10.1250.10 237 278 1.2E-13 T 28-03-2018 AL504_RS30880 dd54ea507646e669443ea320b0831bfe 279 Gene3D G3DSA:3.40.50.300 82 267 5.8E-17 T 28-03-2018 AL504_RS30880 dd54ea507646e669443ea320b0831bfe 279 SMART SM00382 135 257 2.0E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30880 dd54ea507646e669443ea320b0831bfe 279 Pfam PF01695 IstB-like ATP binding protein 92 252 2.0E-18 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AL504_RS30880 dd54ea507646e669443ea320b0831bfe 279 SUPERFAMILY SSF52540 100 271 1.14E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07865 9de93e6173bc43319e1f65955e6abd17 337 SUPERFAMILY SSF53850 27 288 2.68E-28 T 28-03-2018 AL504_RS07865 9de93e6173bc43319e1f65955e6abd17 337 Gene3D G3DSA:3.40.190.10 22 139 9.4E-13 T 28-03-2018 AL504_RS07865 9de93e6173bc43319e1f65955e6abd17 337 Pfam PF13379 NMT1-like family 23 266 8.3E-29 T 28-03-2018 AL504_RS07865 9de93e6173bc43319e1f65955e6abd17 337 Gene3D G3DSA:3.40.190.10 140 335 4.1E-25 T 28-03-2018 AL504_RS20565 73a339c34a3b75a07588257ece76a195 240 Gene3D G3DSA:3.40.50.300 2 238 8.2E-52 T 28-03-2018 AL504_RS20565 73a339c34a3b75a07588257ece76a195 240 SMART SM00382 32 213 1.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS20565 73a339c34a3b75a07588257ece76a195 240 Pfam PF00005 ABC transporter 23 164 2.9E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS20565 73a339c34a3b75a07588257ece76a195 240 SUPERFAMILY SSF52540 7 226 9.63E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30755 163973751febc698e31417fe26f3559f 379 Pfam PF07687 Peptidase dimerisation domain 177 284 6.8E-25 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS30755 163973751febc698e31417fe26f3559f 379 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.732 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL504_RS30755 163973751febc698e31417fe26f3559f 379 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.8E-160 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL504_RS30755 163973751febc698e31417fe26f3559f 379 Pfam PF01546 Peptidase family M20/M25/M40 65 374 2.2E-45 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS30755 163973751febc698e31417fe26f3559f 379 Gene3D G3DSA:3.40.630.10 2 282 5.7E-64 T 28-03-2018 AL504_RS30755 163973751febc698e31417fe26f3559f 379 SUPERFAMILY SSF53187 6 180 1.76E-67 T 28-03-2018 AL504_RS30755 163973751febc698e31417fe26f3559f 379 SUPERFAMILY SSF53187 294 376 1.76E-67 T 28-03-2018 AL504_RS30755 163973751febc698e31417fe26f3559f 379 SUPERFAMILY SSF55031 181 290 5.68E-30 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS12880 d06fc6e7b35e8b7bb2928612b7d7f5f0 314 Pfam PF04773 FecR protein 108 199 1.8E-15 T 28-03-2018 IPR006860 FecR protein AL504_RS12880 d06fc6e7b35e8b7bb2928612b7d7f5f0 314 PIRSF PIRSF018266 1 313 5.8E-79 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS12880 d06fc6e7b35e8b7bb2928612b7d7f5f0 314 Pfam PF16220 Domain of unknown function (DUF4880) 8 49 4.4E-12 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS29545 bca56426f5e6402f5a0d06330f7aa2e4 167 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 20 134 5.2E-10 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS29545 bca56426f5e6402f5a0d06330f7aa2e4 167 SUPERFAMILY SSF54593 12 137 1.34E-36 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS29545 bca56426f5e6402f5a0d06330f7aa2e4 167 Gene3D G3DSA:3.10.180.10 12 148 2.4E-29 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS02385 e415fe1aaa3a3a1e6e4222979b1baf34 482 SUPERFAMILY SSF89796 49 219 3.66E-29 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS02385 e415fe1aaa3a3a1e6e4222979b1baf34 482 Gene3D G3DSA:3.40.50.10540 221 441 1.2E-67 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS02385 e415fe1aaa3a3a1e6e4222979b1baf34 482 Pfam PF02515 CoA-transferase family III 227 418 2.1E-44 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS02385 e415fe1aaa3a3a1e6e4222979b1baf34 482 Pfam PF02515 CoA-transferase family III 55 209 1.4E-6 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS02385 e415fe1aaa3a3a1e6e4222979b1baf34 482 Gene3D G3DSA:3.30.1540.10 109 204 3.3E-16 T 28-03-2018 AL504_RS02385 e415fe1aaa3a3a1e6e4222979b1baf34 482 SUPERFAMILY SSF89796 225 423 1.02E-54 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.9E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 SUPERFAMILY SSF46785 1 87 1.01E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 Gene3D G3DSA:3.40.190.10 92 174 2.0E-21 T 28-03-2018 AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 Pfam PF03466 LysR substrate binding domain 87 289 8.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 Gene3D G3DSA:3.40.190.10 175 262 2.2E-22 T 28-03-2018 AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 SUPERFAMILY SSF53850 87 292 4.34E-34 T 28-03-2018 AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16990 5a165b7d3ef7a5bf518c8609c8e3b8ae 293 Gene3D G3DSA:1.10.10.10 1 91 1.1E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19375 f0b5463a6a83fb7d27a027394c09a4d7 308 SUPERFAMILY SSF53686 5 308 4.06E-77 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS19375 f0b5463a6a83fb7d27a027394c09a4d7 308 Gene3D G3DSA:3.40.50.1100 141 308 3.4E-41 T 28-03-2018 AL504_RS19375 f0b5463a6a83fb7d27a027394c09a4d7 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AL504_RS19375 f0b5463a6a83fb7d27a027394c09a4d7 308 Gene3D G3DSA:3.40.50.1100 20 140 3.7E-30 T 28-03-2018 AL504_RS19375 f0b5463a6a83fb7d27a027394c09a4d7 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 303 3.0E-59 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 Gene3D G3DSA:3.40.50.720 1 65 2.1E-8 T 28-03-2018 AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 Gene3D G3DSA:3.30.9.10 231 361 1.8E-24 T 28-03-2018 AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 Gene3D G3DSA:3.30.9.10 133 230 1.2E-8 T 28-03-2018 AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 Pfam PF01266 FAD dependent oxidoreductase 4 400 2.2E-67 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 SUPERFAMILY SSF54373 271 363 3.01E-14 T 28-03-2018 AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 SUPERFAMILY SSF51905 1 55 5.96E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 SUPERFAMILY SSF51905 363 403 5.96E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS29775 320cf6c198ce8dc9f74d801093a50c5a 409 SUPERFAMILY SSF51905 106 271 5.96E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 127 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 141 161 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 107 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 SUPERFAMILY SSF46785 31 163 6.57E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 SMART SM00347 50 151 2.1E-26 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 Gene3D G3DSA:1.10.10.10 19 176 5.9E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02100 db3d5a0266388d8487357b0ba8aaefe2 177 Pfam PF01047 MarR family 57 115 8.8E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS25145 8a6105e22fe062a68bc12a80323c5c17 316 SUPERFAMILY SSF53850 97 305 3.8E-33 T 28-03-2018 AL504_RS25145 8a6105e22fe062a68bc12a80323c5c17 316 Gene3D G3DSA:3.40.190.10 101 190 6.0E-17 T 28-03-2018 AL504_RS25145 8a6105e22fe062a68bc12a80323c5c17 316 Gene3D G3DSA:3.40.190.10 191 278 1.3E-10 T 28-03-2018 AL504_RS25145 8a6105e22fe062a68bc12a80323c5c17 316 Pfam PF03466 LysR substrate binding domain 101 306 2.2E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS25145 8a6105e22fe062a68bc12a80323c5c17 316 Gene3D G3DSA:1.10.10.10 6 95 1.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25145 8a6105e22fe062a68bc12a80323c5c17 316 SUPERFAMILY SSF46785 10 92 5.44E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25145 8a6105e22fe062a68bc12a80323c5c17 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 4.7E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 Gene3D G3DSA:3.40.50.720 194 429 1.5E-75 T 28-03-2018 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 227 247 4.6E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 185 207 4.6E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 354 365 4.6E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 105 119 4.6E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 194 426 1.4E-74 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 SUPERFAMILY SSF53223 13 196 3.52E-68 T 28-03-2018 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 SMART SM00839 196 426 1.5E-95 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 48 176 2.9E-55 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 Gene3D G3DSA:3.40.50.10860 50 193 2.2E-55 T 28-03-2018 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 PIRSF PIRSF000185 16 429 2.1E-160 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 SUPERFAMILY SSF51735 194 428 1.17E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS02290 98ce6471c78cf5276aeef32d07d64ac7 429 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 113 126 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS22925 183752c8b140a43bc684e29565b202cb 245 SUPERFAMILY SSF52821 99 235 2.1E-25 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS22925 183752c8b140a43bc684e29565b202cb 245 Gene3D G3DSA:3.40.250.10 107 225 8.1E-22 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS22925 183752c8b140a43bc684e29565b202cb 245 SMART SM00450 119 220 5.4E-10 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS22925 183752c8b140a43bc684e29565b202cb 245 Pfam PF00581 Rhodanese-like domain 119 214 8.9E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS22925 183752c8b140a43bc684e29565b202cb 245 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 245 32.608 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 AL504_RS00690 8061a460de2f2bca112e689221825bf7 433 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 5.4E-54 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS00690 8061a460de2f2bca112e689221825bf7 433 Gene3D G3DSA:3.65.10.10 224 432 2.8E-30 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS00690 8061a460de2f2bca112e689221825bf7 433 Gene3D G3DSA:3.65.10.10 21 223 6.3E-39 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL504_RS00690 8061a460de2f2bca112e689221825bf7 433 SUPERFAMILY SSF55205 1 429 1.8E-92 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL504_RS20890 a83dd9df7687d2eab3ad491c37ab1d9c 153 SUPERFAMILY SSF46785 10 149 3.46E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20890 a83dd9df7687d2eab3ad491c37ab1d9c 153 SMART SM00347 37 136 6.1E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS20890 a83dd9df7687d2eab3ad491c37ab1d9c 153 Pfam PF01047 MarR family 44 102 1.1E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS20890 a83dd9df7687d2eab3ad491c37ab1d9c 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 9.6E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS20890 a83dd9df7687d2eab3ad491c37ab1d9c 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 9.6E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS20890 a83dd9df7687d2eab3ad491c37ab1d9c 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 9.6E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS20890 a83dd9df7687d2eab3ad491c37ab1d9c 153 Gene3D G3DSA:1.10.10.10 1 152 7.2E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17900 9ccd2f18a08e68e455c3be2c3a1540e8 80 Gene3D G3DSA:2.40.50.100 1 79 2.1E-16 T 28-03-2018 AL504_RS17900 9ccd2f18a08e68e455c3be2c3a1540e8 80 SUPERFAMILY SSF51230 4 79 1.2E-21 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS17900 9ccd2f18a08e68e455c3be2c3a1540e8 80 Pfam PF00364 Biotin-requiring enzyme 5 78 1.3E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS17900 9ccd2f18a08e68e455c3be2c3a1540e8 80 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 40 53 2.2E-13 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL504_RS17900 9ccd2f18a08e68e455c3be2c3a1540e8 80 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 8 21 2.2E-13 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL504_RS17900 9ccd2f18a08e68e455c3be2c3a1540e8 80 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 25 39 2.2E-13 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL504_RS30245 a796366e5f880a2be4926157401b6134 266 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 7.1E-120 T 28-03-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 AL504_RS30245 a796366e5f880a2be4926157401b6134 266 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 6.7E-62 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL504_RS30245 a796366e5f880a2be4926157401b6134 266 Gene3D G3DSA:3.20.20.60 2 253 2.3E-51 T 28-03-2018 AL504_RS30245 a796366e5f880a2be4926157401b6134 266 SUPERFAMILY SSF51621 3 257 1.11E-83 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS14760 b827a1284387d6c0429fe706d0781609 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 28 387 1.2E-121 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AL504_RS14760 b827a1284387d6c0429fe706d0781609 397 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 23 396 38.796 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AL504_RS14760 b827a1284387d6c0429fe706d0781609 397 Pfam PF01098 Cell cycle protein 30 389 4.9E-100 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AL504_RS26640 344a229e95bc82737e428b5f25202b08 337 SUPERFAMILY SSF54506 1 334 1.4E-94 T 28-03-2018 AL504_RS26640 344a229e95bc82737e428b5f25202b08 337 PIRSF PIRSF029792 1 337 1.9E-100 T 28-03-2018 IPR008794 Proline racemase family AL504_RS26640 344a229e95bc82737e428b5f25202b08 337 Gene3D G3DSA:3.10.310.10 154 312 3.4E-45 T 28-03-2018 AL504_RS26640 344a229e95bc82737e428b5f25202b08 337 Pfam PF05544 Proline racemase 9 334 5.3E-94 T 28-03-2018 IPR008794 Proline racemase family AL504_RS26640 344a229e95bc82737e428b5f25202b08 337 Gene3D G3DSA:3.10.310.10 1 153 8.7E-33 T 28-03-2018 AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 Gene3D G3DSA:2.40.128.20 1 173 2.1E-44 T 28-03-2018 IPR012674 Calycin AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 PIRSF PIRSF036893 1 173 5.2E-61 T 28-03-2018 IPR022271 Lipocalin, ApoD type AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 ProSitePatterns PS00213 Lipocalin signature. 33 44 - T 28-03-2018 IPR022272 Lipocalin family conserved site AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 SUPERFAMILY SSF50814 10 172 2.87E-47 T 28-03-2018 IPR012674 Calycin AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 PRINTS PR01171 Bacterial lipocalin signature 102 116 3.2E-12 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 PRINTS PR01171 Bacterial lipocalin signature 119 127 3.2E-12 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 PRINTS PR01171 Bacterial lipocalin signature 32 46 3.2E-12 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 PRINTS PR01171 Bacterial lipocalin signature 134 145 3.2E-12 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL504_RS16660 62a9bd6c47203b0d96e08a265e9cbeb3 173 Pfam PF08212 Lipocalin-like domain 32 172 1.3E-53 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AL504_RS12090 acee9be1eb1a5283013e7d1f3055f32d 305 Gene3D G3DSA:1.10.10.10 1 85 3.1E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12090 acee9be1eb1a5283013e7d1f3055f32d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS12090 acee9be1eb1a5283013e7d1f3055f32d 305 SUPERFAMILY SSF46785 2 80 7.07E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12090 acee9be1eb1a5283013e7d1f3055f32d 305 Pfam PF03466 LysR substrate binding domain 90 293 2.5E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS12090 acee9be1eb1a5283013e7d1f3055f32d 305 Gene3D G3DSA:3.40.190.10 179 267 8.4E-17 T 28-03-2018 AL504_RS12090 acee9be1eb1a5283013e7d1f3055f32d 305 SUPERFAMILY SSF53850 92 297 5.43E-37 T 28-03-2018 AL504_RS12090 acee9be1eb1a5283013e7d1f3055f32d 305 Gene3D G3DSA:3.40.190.10 89 178 1.0E-21 T 28-03-2018 AL504_RS17590 4a730dd9f72b1c86ab2be824767779dd 305 Gene3D G3DSA:3.40.190.10 95 189 5.7E-15 T 28-03-2018 AL504_RS17590 4a730dd9f72b1c86ab2be824767779dd 305 SUPERFAMILY SSF46785 8 94 5.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17590 4a730dd9f72b1c86ab2be824767779dd 305 Gene3D G3DSA:3.40.190.10 190 267 1.1E-5 T 28-03-2018 AL504_RS17590 4a730dd9f72b1c86ab2be824767779dd 305 Gene3D G3DSA:1.10.10.10 3 90 7.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17590 4a730dd9f72b1c86ab2be824767779dd 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 4.0E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS17590 4a730dd9f72b1c86ab2be824767779dd 305 Pfam PF03466 LysR substrate binding domain 98 297 4.0E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS17590 4a730dd9f72b1c86ab2be824767779dd 305 SUPERFAMILY SSF53850 113 299 6.7E-24 T 28-03-2018 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 2.4E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 2.4E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 2.4E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 2.4E-42 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 491 3.0E-44 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 SUPERFAMILY SSF58104 245 525 3.53E-61 T 28-03-2018 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 SMART SM00283 277 524 8.6E-72 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 Pfam PF12729 Four helix bundle sensory module for signal transduction 18 189 4.2E-10 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 Gene3D G3DSA:1.10.287.950 333 528 3.0E-46 T 28-03-2018 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 Gene3D G3DSA:1.10.287.950 181 332 1.4E-11 T 28-03-2018 AL504_RS13000 7be82612f556dc864c7c844eb3aef1ca 547 Gene3D G3DSA:1.20.120.30 31 180 1.1E-10 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS06255 48840840f50915b2740936a0a51098d9 323 SUPERFAMILY SSF53850 116 284 7.8E-14 T 28-03-2018 AL504_RS06255 48840840f50915b2740936a0a51098d9 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 319 1.3E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS06255 48840840f50915b2740936a0a51098d9 323 Gene3D G3DSA:3.40.190.10 125 278 2.0E-11 T 28-03-2018 AL504_RS06255 48840840f50915b2740936a0a51098d9 323 PIRSF PIRSF017082 1 323 3.2E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 Gene3D G3DSA:1.20.1640.10 87 302 4.1E-32 T 28-03-2018 AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 Pfam PF02355 Protein export membrane protein 107 291 1.9E-63 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 29.087 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 SUPERFAMILY SSF82866 73 294 1.83E-39 T 28-03-2018 AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 5.1E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 5.1E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 5.1E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 5.1E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 2.8E-75 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 Pfam PF07549 SecD/SecF GG Motif 32 59 2.3E-8 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL504_RS25610 7e14f673523fa7f673d960c7be5ee22b 311 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 95 280 2.0E-49 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL504_RS02865 a8d279b99a1c083098782757247d5685 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.2E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02865 a8d279b99a1c083098782757247d5685 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.2E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02865 a8d279b99a1c083098782757247d5685 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.2E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02865 a8d279b99a1c083098782757247d5685 294 SUPERFAMILY SSF53850 95 288 1.75E-33 T 28-03-2018 AL504_RS02865 a8d279b99a1c083098782757247d5685 294 Gene3D G3DSA:3.40.190.10 177 267 1.3E-26 T 28-03-2018 AL504_RS02865 a8d279b99a1c083098782757247d5685 294 Gene3D G3DSA:3.40.190.10 86 176 5.4E-18 T 28-03-2018 AL504_RS02865 a8d279b99a1c083098782757247d5685 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.9E-27 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02865 a8d279b99a1c083098782757247d5685 294 SUPERFAMILY SSF46785 1 110 1.65E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02865 a8d279b99a1c083098782757247d5685 294 Gene3D G3DSA:1.10.10.10 1 83 1.3E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02865 a8d279b99a1c083098782757247d5685 294 Pfam PF03466 LysR substrate binding domain 88 286 6.2E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 SUPERFAMILY SSF54909 64 149 3.75E-20 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 SMART SM00344 1 109 3.6E-44 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 Gene3D G3DSA:3.30.70.920 54 146 2.3E-23 T 28-03-2018 AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.3E-23 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 Gene3D G3DSA:1.10.10.10 2 53 1.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 6.1E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 6.1E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 6.1E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.0E-18 T 28-03-2018 AL504_RS15710 bee4fe79085ea7ae44f96c43203a3aab 149 SUPERFAMILY SSF46785 1 60 8.06E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30375 3482793f92374b2a4bdff4d1f00f53a9 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 244 9.2E-80 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL504_RS30375 3482793f92374b2a4bdff4d1f00f53a9 254 Gene3D G3DSA:3.90.550.10 1 254 1.6E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS30375 3482793f92374b2a4bdff4d1f00f53a9 254 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 251 40.5 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL504_RS30375 3482793f92374b2a4bdff4d1f00f53a9 254 Pfam PF02348 Cytidylyltransferase 4 221 1.4E-52 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AL504_RS30375 3482793f92374b2a4bdff4d1f00f53a9 254 SUPERFAMILY SSF53448 3 249 6.34E-62 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS06030 2c7fe2f72eab901648cb747f07e7dba6 145 SUPERFAMILY SSF54637 13 138 2.06E-27 T 28-03-2018 IPR029069 HotDog domain AL504_RS06030 2c7fe2f72eab901648cb747f07e7dba6 145 Pfam PF03061 Thioesterase superfamily 53 128 1.2E-13 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS06030 2c7fe2f72eab901648cb747f07e7dba6 145 Gene3D G3DSA:3.10.129.10 9 140 2.6E-25 T 28-03-2018 AL504_RS06030 2c7fe2f72eab901648cb747f07e7dba6 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 127 6.5E-16 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL504_RS29125 6c467fa6921b5c7f8bb4d9650f8db6b9 359 Pfam PF00924 Mechanosensitive ion channel 139 337 1.2E-47 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL504_RS29125 6c467fa6921b5c7f8bb4d9650f8db6b9 359 SUPERFAMILY SSF82861 97 179 1.57E-11 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL504_RS29125 6c467fa6921b5c7f8bb4d9650f8db6b9 359 Gene3D G3DSA:2.30.30.60 196 245 2.7E-9 T 28-03-2018 AL504_RS29125 6c467fa6921b5c7f8bb4d9650f8db6b9 359 SUPERFAMILY SSF50182 181 245 3.27E-11 T 28-03-2018 IPR010920 LSM domain AL504_RS29125 6c467fa6921b5c7f8bb4d9650f8db6b9 359 SUPERFAMILY SSF82689 247 347 7.59E-13 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL504_RS29125 6c467fa6921b5c7f8bb4d9650f8db6b9 359 Gene3D G3DSA:3.30.70.100 249 336 4.9E-13 T 28-03-2018 AL504_RS01155 7b024d477e40c2f1e0f180dd4f36b2d7 592 Pfam PF06276 Ferric iron reductase FhuF-like transporter 410 574 4.7E-26 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain AL504_RS01155 7b024d477e40c2f1e0f180dd4f36b2d7 592 Pfam PF04183 IucA / IucC family 144 382 5.1E-56 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AL504_RS07235 06322039c69668c819cd61ee951efa46 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 176 6.9E-5 T 28-03-2018 AL504_RS07235 06322039c69668c819cd61ee951efa46 254 SUPERFAMILY SSF51735 8 247 6.13E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.2E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.2E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.2E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.2E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.2E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.2E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.8E-64 T 28-03-2018 AL504_RS07235 06322039c69668c819cd61ee951efa46 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07235 06322039c69668c819cd61ee951efa46 254 Gene3D G3DSA:3.40.50.720 52 253 5.5E-60 T 28-03-2018 AL504_RS07235 06322039c69668c819cd61ee951efa46 254 Gene3D G3DSA:3.40.50.720 1 51 4.0E-8 T 28-03-2018 AL504_RS24880 af2997b6b252629baf4fb7186c97fd66 219 Gene3D G3DSA:2.60.120.590 17 219 1.2E-45 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL504_RS24880 af2997b6b252629baf4fb7186c97fd66 219 SUPERFAMILY SSF51197 26 217 2.33E-57 T 28-03-2018 AL504_RS24880 af2997b6b252629baf4fb7186c97fd66 219 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 37 216 6.6E-50 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL504_RS12715 18d51c3d812f6ba122f64fce7868ce71 520 SUPERFAMILY SSF53850 23 507 2.35E-120 T 28-03-2018 AL504_RS12715 18d51c3d812f6ba122f64fce7868ce71 520 Gene3D G3DSA:3.10.105.10 297 489 3.3E-45 T 28-03-2018 AL504_RS12715 18d51c3d812f6ba122f64fce7868ce71 520 PIRSF PIRSF002741 1 518 8.6E-98 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS12715 18d51c3d812f6ba122f64fce7868ce71 520 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 423 2.5E-91 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS12715 18d51c3d812f6ba122f64fce7868ce71 520 Gene3D G3DSA:3.40.190.10 152 296 2.9E-37 T 28-03-2018 AL504_RS12715 18d51c3d812f6ba122f64fce7868ce71 520 Gene3D G3DSA:3.90.76.10 51 151 8.8E-29 T 28-03-2018 AL504_RS15110 9c916d44298dddde7186282dadae6aaa 401 Gene3D G3DSA:3.40.50.2300 20 166 3.7E-14 T 28-03-2018 AL504_RS15110 9c916d44298dddde7186282dadae6aaa 401 Pfam PF13458 Periplasmic binding protein 30 365 4.7E-85 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS15110 9c916d44298dddde7186282dadae6aaa 401 SUPERFAMILY SSF53822 30 379 4.71E-85 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS15110 9c916d44298dddde7186282dadae6aaa 401 Gene3D G3DSA:3.40.50.2300 167 308 9.2E-33 T 28-03-2018 AL504_RS26905 5c347666adaa320926924d16adf9e44f 55 SUPERFAMILY SSF57829 1 53 2.81E-19 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL504_RS26905 5c347666adaa320926924d16adf9e44f 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.7E-25 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS26905 5c347666adaa320926924d16adf9e44f 55 Pfam PF00471 Ribosomal protein L33 7 53 1.7E-17 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS26905 5c347666adaa320926924d16adf9e44f 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.773 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 Gene3D G3DSA:2.170.130.10 111 257 3.5E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 152 801 1.0E-102 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 SUPERFAMILY SSF56935 114 801 8.25E-118 T 28-03-2018 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 Pfam PF07660 Secretin and TonB N terminus short domain 60 109 1.9E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 SMART SM00965 59 110 4.3E-15 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 247 4.2E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 Gene3D G3DSA:2.40.170.20 258 801 1.2E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03045 b2af6464dc5e2f6e58c9a48747d79925 801 Pfam PF00593 TonB dependent receptor 330 798 3.0E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23290 d882242c52e1a8fc7a39ed80afd6f996 198 SUPERFAMILY SSF53178 5 193 6.15E-66 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL504_RS23290 d882242c52e1a8fc7a39ed80afd6f996 198 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 192 6.9E-59 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL504_RS23290 d882242c52e1a8fc7a39ed80afd6f996 198 Gene3D G3DSA:3.40.50.1470 3 198 2.3E-69 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL504_RS23290 d882242c52e1a8fc7a39ed80afd6f996 198 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL504_RS23290 d882242c52e1a8fc7a39ed80afd6f996 198 Pfam PF01195 Peptidyl-tRNA hydrolase 7 188 5.8E-57 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL504_RS23290 d882242c52e1a8fc7a39ed80afd6f996 198 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 186 35.285 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL504_RS23290 d882242c52e1a8fc7a39ed80afd6f996 198 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 Pfam PF13432 Tetratricopeptide repeat 168 222 4.2E-6 T 28-03-2018 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 Pfam PF13432 Tetratricopeptide repeat 100 153 6.7E-6 T 28-03-2018 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 SUPERFAMILY SSF48452 63 224 4.55E-25 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 Gene3D G3DSA:1.25.40.10 175 233 1.8E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 SMART SM00028 189 222 0.0013 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 SMART SM00028 155 188 34.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 SMART SM00028 87 120 0.0043 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 Gene3D G3DSA:1.25.40.10 137 174 0.0029 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS26590 17145eabf42618c1cef8f1bf35682013 234 Gene3D G3DSA:1.25.40.10 34 136 3.1E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 Gene3D G3DSA:1.10.10.60 2 40 2.1E-14 T 28-03-2018 AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 SUPERFAMILY SSF48498 87 202 6.53E-21 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 Gene3D G3DSA:1.10.260.40 41 66 9.6E-14 T 28-03-2018 AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 SUPERFAMILY SSF46689 9 81 5.64E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 3.2E-17 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 Gene3D G3DSA:1.10.357.10 67 202 6.5E-21 T 28-03-2018 AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.0E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS16320 4aa2e93d3e603972be98659e7c3c9ed8 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.0E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS28165 0ec8946b62585a953a5d4e00c0f2398a 325 Gene3D G3DSA:1.10.760.10 67 165 1.0E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28165 0ec8946b62585a953a5d4e00c0f2398a 325 SUPERFAMILY SSF46626 178 281 4.66E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28165 0ec8946b62585a953a5d4e00c0f2398a 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 189 269 7.2E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28165 0ec8946b62585a953a5d4e00c0f2398a 325 SUPERFAMILY SSF46626 62 172 2.83E-29 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28165 0ec8946b62585a953a5d4e00c0f2398a 325 Gene3D G3DSA:1.10.760.10 174 272 4.1E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS20335 1619b86639247f78c60869542190580b 599 SUPERFAMILY SSF52540 354 562 9.71E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20335 1619b86639247f78c60869542190580b 599 Pfam PF00005 ABC transporter 368 497 8.4E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS20335 1619b86639247f78c60869542190580b 599 SMART SM00382 377 546 8.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS20335 1619b86639247f78c60869542190580b 599 Gene3D G3DSA:3.40.50.300 330 575 6.4E-44 T 28-03-2018 AL504_RS06825 5865d573191dcf1f2536936587400385 314 SUPERFAMILY SSF158544 110 210 3.66E-5 T 28-03-2018 AL504_RS06825 5865d573191dcf1f2536936587400385 314 SUPERFAMILY SSF47781 209 258 3.41E-5 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS06825 5865d573191dcf1f2536936587400385 314 Gene3D G3DSA:1.10.40.60 214 273 1.1E-8 T 28-03-2018 AL504_RS06825 5865d573191dcf1f2536936587400385 314 PIRSF PIRSF002786 4 314 1.2E-66 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL504_RS06825 5865d573191dcf1f2536936587400385 314 Pfam PF03934 Type II secretion system (T2SS), protein K 33 300 3.7E-59 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL504_RS06825 5865d573191dcf1f2536936587400385 314 Gene3D G3DSA:3.30.1300.30 29 145 3.1E-21 T 28-03-2018 AL504_RS06825 5865d573191dcf1f2536936587400385 314 SUPERFAMILY SSF54523 39 109 2.15E-5 T 28-03-2018 AL504_RS06825 5865d573191dcf1f2536936587400385 314 SUPERFAMILY SSF54523 274 301 2.15E-5 T 28-03-2018 AL504_RS11565 e64007fba636dcb3bbe0aaedeb9df0b9 525 PIRSF PIRSF029745 1 525 2.0E-145 T 28-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AL504_RS11565 e64007fba636dcb3bbe0aaedeb9df0b9 525 Pfam PF17287 POTRA domain 116 170 4.9E-19 T 28-03-2018 IPR035251 ShlB, POTRA domain AL504_RS11565 e64007fba636dcb3bbe0aaedeb9df0b9 525 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 176 488 4.1E-99 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AL504_RS11565 e64007fba636dcb3bbe0aaedeb9df0b9 525 Gene3D G3DSA:2.40.160.50 143 524 2.2E-44 T 28-03-2018 AL504_RS11565 e64007fba636dcb3bbe0aaedeb9df0b9 525 Pfam PF08479 POTRA domain, ShlB-type 40 115 5.7E-17 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AL504_RS11565 e64007fba636dcb3bbe0aaedeb9df0b9 525 Gene3D G3DSA:3.10.20.310 43 115 3.6E-9 T 28-03-2018 AL504_RS13310 dd2c63f950b9fac2e1a6546f55ef60bc 91 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 14 84 7.2E-28 T 28-03-2018 IPR019886 Sodium symporter small subunit, predicted AL504_RS13310 dd2c63f950b9fac2e1a6546f55ef60bc 91 Pfam PF13937 Domain of unknown function (DUF4212) 13 83 1.1E-25 T 28-03-2018 IPR019886 Sodium symporter small subunit, predicted AL504_RS08060 807fb19e1cea08a7a0870f5812800c35 153 SUPERFAMILY SSF89095 5 152 1.05E-35 T 28-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AL504_RS08060 807fb19e1cea08a7a0870f5812800c35 153 Gene3D G3DSA:1.10.10.410 94 153 2.4E-12 T 28-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AL504_RS08060 807fb19e1cea08a7a0870f5812800c35 153 Pfam PF09424 Yqey-like protein 7 152 1.4E-48 T 28-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial AL504_RS08060 807fb19e1cea08a7a0870f5812800c35 153 Gene3D G3DSA:1.10.1510.10 4 93 2.9E-29 T 28-03-2018 AL504_RS27655 8fcce82cd7cb96b1ca56f7fa1e28ed88 221 SMART SM00862 145 216 8.0E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS27655 8fcce82cd7cb96b1ca56f7fa1e28ed88 221 Gene3D G3DSA:1.10.10.10 122 220 6.7E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27655 8fcce82cd7cb96b1ca56f7fa1e28ed88 221 Pfam PF00072 Response regulator receiver domain 3 112 2.5E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS27655 8fcce82cd7cb96b1ca56f7fa1e28ed88 221 Gene3D G3DSA:3.40.50.2300 1 121 2.5E-30 T 28-03-2018 AL504_RS27655 8fcce82cd7cb96b1ca56f7fa1e28ed88 221 SMART SM00448 1 112 3.5E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS27655 8fcce82cd7cb96b1ca56f7fa1e28ed88 221 SUPERFAMILY SSF52172 1 171 1.04E-34 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS27655 8fcce82cd7cb96b1ca56f7fa1e28ed88 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 7.3E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 Gene3D G3DSA:1.10.10.60 213 260 1.1E-8 T 28-03-2018 AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 SUPERFAMILY SSF51182 17 88 9.25E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 Gene3D G3DSA:2.60.120.10 17 90 9.5E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 SUPERFAMILY SSF46689 210 257 5.38E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 SMART SM00342 173 255 3.7E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 Pfam PF12833 Helix-turn-helix domain 179 257 1.8E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS13855 9dfccca23c940308b1b5d0eff6c4bee2 262 Gene3D G3DSA:1.10.10.60 130 212 7.7E-7 T 28-03-2018 AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 Gene3D G3DSA:2.60.260.20 123 211 9.2E-21 T 28-03-2018 AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 Gene3D G3DSA:1.10.287.110 1 122 1.9E-29 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 SUPERFAMILY SSF49493 216 298 3.66E-17 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 Gene3D G3DSA:2.60.260.20 212 310 3.8E-18 T 28-03-2018 AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 SUPERFAMILY SSF46565 1 85 1.83E-28 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 Pfam PF01556 DnaJ C terminal domain 135 287 9.2E-31 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 PRINTS PR00625 DnaJ domain signature 25 40 2.8E-21 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 PRINTS PR00625 DnaJ domain signature 7 25 2.8E-21 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 PRINTS PR00625 DnaJ domain signature 41 61 2.8E-21 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 PRINTS PR00625 DnaJ domain signature 61 80 2.8E-21 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 Pfam PF00226 DnaJ domain 5 66 7.2E-23 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 SMART SM00271 4 61 3.8E-26 T 28-03-2018 IPR001623 DnaJ domain AL504_RS25830 033b73e1c39ba7cf7e7c07be3973fcb0 315 SUPERFAMILY SSF49493 126 224 1.44E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 Gene3D G3DSA:3.90.226.10 23 215 1.3E-46 T 28-03-2018 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 Pfam PF00574 Clp protease 34 213 1.1E-88 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 24 212 4.9E-104 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 PRINTS PR00127 Clp protease catalytic subunit P signature 189 208 5.6E-53 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 PRINTS PR00127 Clp protease catalytic subunit P signature 40 55 5.6E-53 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 PRINTS PR00127 Clp protease catalytic subunit P signature 132 151 5.6E-53 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 PRINTS PR00127 Clp protease catalytic subunit P signature 111 128 5.6E-53 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 PRINTS PR00127 Clp protease catalytic subunit P signature 80 100 5.6E-53 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 SUPERFAMILY SSF52096 32 214 8.88E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 24 214 44.808 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS31220 271d5d75f3965c2f1b2640319071f5de 217 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 133 146 - T 28-03-2018 IPR033135 ClpP, histidine active site AL504_RS11960 7f3025da1c3cae086bd66c9e298e1ead 377 Gene3D G3DSA:1.10.630.10 4 111 0.07 T 28-03-2018 AL504_RS11960 7f3025da1c3cae086bd66c9e298e1ead 377 Gene3D G3DSA:1.10.630.10 178 307 0.0097 T 28-03-2018 AL504_RS11960 7f3025da1c3cae086bd66c9e298e1ead 377 Gene3D G3DSA:1.10.630.10 308 346 0.0012 T 28-03-2018 AL504_RS11960 7f3025da1c3cae086bd66c9e298e1ead 377 SUPERFAMILY SSF48264 7 344 9.17E-23 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AL504_RS18860 164cf44d00a47878a9d90dcd028b04df 163 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 70 152 1.8E-25 T 28-03-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AL504_RS18860 164cf44d00a47878a9d90dcd028b04df 163 Pfam PF12823 Domain of unknown function (DUF3817) 69 153 5.9E-20 T 28-03-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AL504_RS12535 6c7417e01e3673613a215e9b28c46023 357 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 233 246 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12535 6c7417e01e3673613a215e9b28c46023 357 Pfam PF00146 NADH dehydrogenase 27 345 1.5E-125 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12535 6c7417e01e3673613a215e9b28c46023 357 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 21 352 24.793 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS10120 51de506c2cc1f14fa43f845e61c0ddfc 642 Pfam PF02705 K+ potassium transporter 30 562 1.1E-201 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AL504_RS10120 51de506c2cc1f14fa43f845e61c0ddfc 642 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 21 642 33.103 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup AL504_RS25375 c8ce8d9f6482a5e07571df53f62fb0ac 142 SUPERFAMILY SSF52402 3 142 2.86E-33 T 28-03-2018 AL504_RS25375 c8ce8d9f6482a5e07571df53f62fb0ac 142 Gene3D G3DSA:3.40.50.620 2 142 4.9E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS25375 c8ce8d9f6482a5e07571df53f62fb0ac 142 PRINTS PR01438 Universal stress protein signature 1 18 6.8E-15 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS25375 c8ce8d9f6482a5e07571df53f62fb0ac 142 PRINTS PR01438 Universal stress protein signature 102 114 6.8E-15 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS25375 c8ce8d9f6482a5e07571df53f62fb0ac 142 PRINTS PR01438 Universal stress protein signature 120 142 6.8E-15 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS25375 c8ce8d9f6482a5e07571df53f62fb0ac 142 Pfam PF00582 Universal stress protein family 3 142 7.0E-29 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS07885 c93fa6c323a9358d6ff55e8c9dc1289f 398 Gene3D G3DSA:1.20.1250.20 192 390 4.4E-12 T 28-03-2018 AL504_RS07885 c93fa6c323a9358d6ff55e8c9dc1289f 398 Gene3D G3DSA:1.20.1250.20 2 187 3.5E-22 T 28-03-2018 AL504_RS07885 c93fa6c323a9358d6ff55e8c9dc1289f 398 Pfam PF07690 Major Facilitator Superfamily 11 304 8.3E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS07885 c93fa6c323a9358d6ff55e8c9dc1289f 398 SUPERFAMILY SSF103473 5 386 2.75E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS25890 0fdb4e3ce2400dd9d8a0cba4714854ea 120 SMART SM00418 12 90 3.1E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS25890 0fdb4e3ce2400dd9d8a0cba4714854ea 120 SUPERFAMILY SSF46785 7 105 7.96E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25890 0fdb4e3ce2400dd9d8a0cba4714854ea 120 Pfam PF12840 Helix-turn-helix domain 11 69 1.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25890 0fdb4e3ce2400dd9d8a0cba4714854ea 120 Gene3D G3DSA:1.10.10.10 3 112 2.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 324 349 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 365 383 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 4.5E-81 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 PIRSF PIRSF000099 5 433 4.7E-157 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 Gene3D G3DSA:3.40.50.1980 230 375 3.8E-67 T 28-03-2018 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 SUPERFAMILY SSF53720 30 431 9.61E-87 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 Pfam PF00815 Histidinol dehydrogenase 27 430 2.1E-166 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 38 430 2.2E-159 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 431 40.339 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL504_RS17990 b81d8456a787782dc246cee52b671496 434 Gene3D G3DSA:3.40.50.1980 29 229 2.4E-86 T 28-03-2018 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 SUPERFAMILY SSF56104 6 291 1.96E-102 T 28-03-2018 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 ProSitePatterns PS01057 SAICAR synthetase signature 1. 106 120 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 Pfam PF01259 SAICAR synthetase 16 268 2.9E-102 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 ProSitePatterns PS01058 SAICAR synthetase signature 2. 205 213 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 293 25.88 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 Gene3D G3DSA:3.30.200.20 6 111 1.1E-31 T 28-03-2018 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 Gene3D G3DSA:3.30.470.20 112 249 4.1E-53 T 28-03-2018 AL504_RS26020 fd18d673aa0939d332aef3e8468ff52c 293 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 292 1.5E-82 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AL504_RS05375 ec913654df6e7b2eefdda407d8c32830 148 Gene3D G3DSA:1.10.10.10 1 145 4.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05375 ec913654df6e7b2eefdda407d8c32830 148 Pfam PF02082 Transcriptional regulator 1 81 8.7E-22 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL504_RS05375 ec913654df6e7b2eefdda407d8c32830 148 SUPERFAMILY SSF46785 6 131 6.84E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 Gene3D G3DSA:3.40.190.10 91 175 1.8E-19 T 28-03-2018 AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 Gene3D G3DSA:1.10.10.10 1 90 4.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 SUPERFAMILY SSF53850 90 292 7.91E-42 T 28-03-2018 AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 Gene3D G3DSA:3.40.190.10 176 261 5.3E-25 T 28-03-2018 AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 SUPERFAMILY SSF46785 1 111 3.11E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 Pfam PF03466 LysR substrate binding domain 88 289 8.8E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15085 6a7393bd695efe4f7195d782e66b3263 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 Pfam PF09339 IclR helix-turn-helix domain 22 71 4.7E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 SUPERFAMILY SSF55781 90 235 3.07E-27 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 Gene3D G3DSA:3.30.450.40 166 237 2.4E-12 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 SMART SM00346 20 109 1.3E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 Pfam PF01614 Bacterial transcriptional regulator 170 232 4.5E-7 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 SUPERFAMILY SSF46785 22 92 5.92E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 Gene3D G3DSA:3.30.450.40 83 165 1.2E-16 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13810 7c4234e34c558f9a2fe98718467ab1ad 243 Gene3D G3DSA:1.10.10.10 2 80 2.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15155 0ef094e052e700b5ffe1f84362ff215f 350 Gene3D G3DSA:3.90.550.10 27 236 4.7E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS15155 0ef094e052e700b5ffe1f84362ff215f 350 Pfam PF00535 Glycosyl transferase family 2 40 199 2.5E-32 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS15155 0ef094e052e700b5ffe1f84362ff215f 350 SUPERFAMILY SSF53448 38 264 3.79E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS07195 87d73d2220efceeb65abc7d1e00f3d7b 163 Gene3D G3DSA:1.10.10.10 1 163 2.9E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07195 87d73d2220efceeb65abc7d1e00f3d7b 163 SUPERFAMILY SSF46785 5 143 7.91E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07195 87d73d2220efceeb65abc7d1e00f3d7b 163 Pfam PF01638 HxlR-like helix-turn-helix 20 105 3.4E-23 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AL504_RS14515 e2012e9f83b4e9f97db961cfb128c6fe 201 Gene3D G3DSA:1.10.340.30 11 187 9.7E-75 T 28-03-2018 AL504_RS14515 e2012e9f83b4e9f97db961cfb128c6fe 201 SUPERFAMILY SSF48150 12 188 4.32E-70 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL504_RS14515 e2012e9f83b4e9f97db961cfb128c6fe 201 Pfam PF03352 Methyladenine glycosylase 16 186 2.7E-70 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL504_RS22805 7b58dc930dd28abf9022750c55cc2832 311 SUPERFAMILY SSF103481 38 136 2.09E-11 T 28-03-2018 AL504_RS22805 7b58dc930dd28abf9022750c55cc2832 311 SUPERFAMILY SSF103481 176 278 1.96E-16 T 28-03-2018 AL504_RS22805 7b58dc930dd28abf9022750c55cc2832 311 Pfam PF00892 EamA-like transporter family 143 274 1.1E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS22805 7b58dc930dd28abf9022750c55cc2832 311 Pfam PF00892 EamA-like transporter family 8 132 3.3E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 Pfam PF12833 Helix-turn-helix domain 264 342 2.1E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 SMART SM00342 258 341 3.5E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 Gene3D G3DSA:1.10.10.60 301 356 3.1E-14 T 28-03-2018 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 295 337 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 Gene3D G3DSA:1.10.10.60 241 300 1.1E-13 T 28-03-2018 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 SUPERFAMILY SSF52317 29 219 4.14E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 Gene3D G3DSA:3.40.50.880 26 240 3.7E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 Pfam PF01965 DJ-1/PfpI family 68 202 2.9E-14 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 SUPERFAMILY SSF46689 242 292 8.06E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 SUPERFAMILY SSF46689 294 345 6.72E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 325 1.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS26665 ac63761b3cb12f8f0de7f649de0485f3 360 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 325 341 1.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS19445 7b7655aa31a48c5b7298686049825789 225 Gene3D G3DSA:1.10.10.10 127 225 2.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19445 7b7655aa31a48c5b7298686049825789 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 2.3E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS19445 7b7655aa31a48c5b7298686049825789 225 Gene3D G3DSA:3.40.50.2300 1 126 3.2E-32 T 28-03-2018 AL504_RS19445 7b7655aa31a48c5b7298686049825789 225 SMART SM00862 146 219 1.1E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS19445 7b7655aa31a48c5b7298686049825789 225 Pfam PF00072 Response regulator receiver domain 3 113 2.3E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS19445 7b7655aa31a48c5b7298686049825789 225 SUPERFAMILY SSF52172 1 167 1.99E-34 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS19445 7b7655aa31a48c5b7298686049825789 225 SMART SM00448 1 113 1.2E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS13520 adf98915bdb1c91e5154085fa602ef21 159 Gene3D G3DSA:1.20.1290.10 1 152 9.5E-41 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS13520 adf98915bdb1c91e5154085fa602ef21 159 SUPERFAMILY SSF69118 4 145 1.66E-40 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS13520 adf98915bdb1c91e5154085fa602ef21 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 36 78 5.1E-12 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS13520 adf98915bdb1c91e5154085fa602ef21 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 94 1.2E-15 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 Gene3D G3DSA:3.40.50.10860 11 139 8.3E-49 T 28-03-2018 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 2.0E-69 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 SUPERFAMILY SSF53223 1 121 5.66E-42 T 28-03-2018 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.6E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.6E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.6E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.6E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.6E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.6E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.6E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 39.21 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 Gene3D G3DSA:3.40.50.720 140 263 4.9E-40 T 28-03-2018 AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 SUPERFAMILY SSF51735 122 280 1.89E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06670 d2727cf288d37d23a13c44333e806d6b 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 8.6E-43 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL504_RS27280 48282699562861d60480c45ebc5a2643 229 SUPERFAMILY SSF161098 14 205 2.35E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27280 48282699562861d60480c45ebc5a2643 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 112 8.8E-26 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS27280 48282699562861d60480c45ebc5a2643 229 Gene3D G3DSA:1.10.3720.10 2 222 3.9E-38 T 28-03-2018 AL504_RS27280 48282699562861d60480c45ebc5a2643 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 220 1.1E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03785 dfd18c685e0a5539c1f0607fbca94001 339 Pfam PF00850 Histone deacetylase domain 48 334 4.2E-69 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS03785 dfd18c685e0a5539c1f0607fbca94001 339 Gene3D G3DSA:3.40.800.20 1 339 7.5E-93 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS03785 dfd18c685e0a5539c1f0607fbca94001 339 PRINTS PR01270 Histone deacetylase superfamily signature 153 176 3.3E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS03785 dfd18c685e0a5539c1f0607fbca94001 339 PRINTS PR01270 Histone deacetylase superfamily signature 185 200 3.3E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS03785 dfd18c685e0a5539c1f0607fbca94001 339 PRINTS PR01270 Histone deacetylase superfamily signature 271 281 3.3E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS03785 dfd18c685e0a5539c1f0607fbca94001 339 SUPERFAMILY SSF52768 3 338 6.23E-89 T 28-03-2018 AL504_RS00945 3690f82a8be57b05273ee7f22bf250fa 243 Gene3D G3DSA:3.40.190.10 113 191 9.0E-6 T 28-03-2018 AL504_RS00945 3690f82a8be57b05273ee7f22bf250fa 243 Gene3D G3DSA:3.40.190.10 6 112 1.3E-12 T 28-03-2018 AL504_RS00945 3690f82a8be57b05273ee7f22bf250fa 243 SMART SM00062 14 233 7.5E-19 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS00945 3690f82a8be57b05273ee7f22bf250fa 243 SUPERFAMILY SSF53850 16 231 5.07E-29 T 28-03-2018 AL504_RS00945 3690f82a8be57b05273ee7f22bf250fa 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 229 3.4E-18 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS17945 50f677db3b245ea08ecba36bee0a71f5 262 Pfam PF02405 Permease MlaE 47 258 1.8E-74 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AL504_RS17945 50f677db3b245ea08ecba36bee0a71f5 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 20 260 3.8E-82 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AL504_RS10650 3e21edcfed969e51c43075ceb4955d2e 278 Gene3D G3DSA:1.10.10.10 1 78 2.4E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10650 3e21edcfed969e51c43075ceb4955d2e 278 SUPERFAMILY SSF46785 2 72 3.06E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10650 3e21edcfed969e51c43075ceb4955d2e 278 Pfam PF01614 Bacterial transcriptional regulator 122 242 4.7E-11 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS10650 3e21edcfed969e51c43075ceb4955d2e 278 SMART SM00346 1 90 8.5E-6 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS10650 3e21edcfed969e51c43075ceb4955d2e 278 SUPERFAMILY SSF55781 58 245 1.44E-29 T 28-03-2018 IPR029016 GAF domain-like AL504_RS10650 3e21edcfed969e51c43075ceb4955d2e 278 Gene3D G3DSA:3.30.450.40 79 257 5.5E-33 T 28-03-2018 IPR029016 GAF domain-like AL504_RS10650 3e21edcfed969e51c43075ceb4955d2e 278 Pfam PF09339 IclR helix-turn-helix domain 5 51 4.8E-7 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 SUPERFAMILY SSF52540 328 559 8.41E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 SMART SM00382 367 555 8.5E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 Gene3D G3DSA:3.40.50.300 334 565 6.0E-53 T 28-03-2018 AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 SUPERFAMILY SSF90123 7 321 2.49E-40 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 Pfam PF00005 ABC transporter 358 507 1.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 Gene3D G3DSA:1.20.1560.10 1 326 2.8E-35 T 28-03-2018 AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 536 5.3E-122 T 28-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 Pfam PF00664 ABC transporter transmembrane region 56 274 1.4E-15 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS21175 ac2d9c204c41a4039a28ac67cecd4f97 565 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 1.4E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 SUPERFAMILY SSF46785 5 115 9.98E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 Gene3D G3DSA:3.40.190.10 179 267 1.9E-22 T 28-03-2018 AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 Pfam PF03466 LysR substrate binding domain 92 296 4.3E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 Gene3D G3DSA:3.40.190.10 95 178 3.0E-11 T 28-03-2018 AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 Gene3D G3DSA:1.10.10.10 2 87 4.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19330 84a9ae0ce70bc0d58a6c4d5bc92fe5ca 307 SUPERFAMILY SSF53850 93 300 1.19E-44 T 28-03-2018 AL504_RS07555 27ab847950dd13a7b357639a76d53c5b 227 Pfam PF02613 Nitrate reductase delta subunit 74 187 4.0E-24 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL504_RS07555 27ab847950dd13a7b357639a76d53c5b 227 Gene3D G3DSA:1.10.3480.10 15 225 1.9E-34 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL504_RS07555 27ab847950dd13a7b357639a76d53c5b 227 SUPERFAMILY SSF89155 18 221 4.71E-36 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 418 1.6E-75 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 Gene3D G3DSA:1.20.1250.20 10 200 3.4E-28 T 28-03-2018 AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.3E-6 T 28-03-2018 AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.3E-6 T 28-03-2018 AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 Gene3D G3DSA:1.20.1250.20 260 464 4.2E-24 T 28-03-2018 AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 SUPERFAMILY SSF103473 249 461 2.88E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 SUPERFAMILY SSF103473 7 200 2.88E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS08315 35930125c6640487f5e9eea38afb512d 464 Pfam PF07690 Major Facilitator Superfamily 22 411 1.9E-50 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS11245 3a3a1a1b7b474b410f2f7d93e4f9fac4 416 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 24 202 1.8E-56 T 28-03-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 AL504_RS11245 3a3a1a1b7b474b410f2f7d93e4f9fac4 416 Gene3D G3DSA:3.30.2010.10 201 283 1.4E-24 T 28-03-2018 AL504_RS11245 3a3a1a1b7b474b410f2f7d93e4f9fac4 416 Pfam PF01435 Peptidase family M48 206 413 3.8E-37 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL504_RS04160 d3b90db6441a72d2b8a002c514c3c726 165 Pfam PF04657 Putative inner membrane exporter, YdcZ 18 154 1.7E-36 T 28-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AL504_RS19280 12f41988ac1c1e15a2fa954afe3b993e 229 SUPERFAMILY SSF161098 17 211 3.01E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19280 12f41988ac1c1e15a2fa954afe3b993e 229 Gene3D G3DSA:1.10.3720.10 2 227 1.3E-38 T 28-03-2018 AL504_RS19280 12f41988ac1c1e15a2fa954afe3b993e 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 226 2.1E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19280 12f41988ac1c1e15a2fa954afe3b993e 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 120 5.7E-23 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS18540 2a57e5da63baca5c65e820d7fa381dff 325 SUPERFAMILY SSF53850 115 287 9.77E-14 T 28-03-2018 AL504_RS18540 2a57e5da63baca5c65e820d7fa381dff 325 Gene3D G3DSA:3.40.190.10 124 289 9.2E-12 T 28-03-2018 AL504_RS18540 2a57e5da63baca5c65e820d7fa381dff 325 PIRSF PIRSF017082 1 325 2.7E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS18540 2a57e5da63baca5c65e820d7fa381dff 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 319 6.6E-70 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25115 9a1c0af822b643ed2f7f8b0bbd0e3cf5 306 SUPERFAMILY SSF53850 90 297 7.85E-41 T 28-03-2018 AL504_RS25115 9a1c0af822b643ed2f7f8b0bbd0e3cf5 306 Pfam PF03466 LysR substrate binding domain 89 294 2.1E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS25115 9a1c0af822b643ed2f7f8b0bbd0e3cf5 306 SUPERFAMILY SSF46785 1 113 4.63E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25115 9a1c0af822b643ed2f7f8b0bbd0e3cf5 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25115 9a1c0af822b643ed2f7f8b0bbd0e3cf5 306 Gene3D G3DSA:3.40.190.10 89 178 5.8E-21 T 28-03-2018 AL504_RS25115 9a1c0af822b643ed2f7f8b0bbd0e3cf5 306 Gene3D G3DSA:1.10.10.10 1 85 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25115 9a1c0af822b643ed2f7f8b0bbd0e3cf5 306 Gene3D G3DSA:3.40.190.10 179 268 1.6E-18 T 28-03-2018 AL504_RS05665 44588dc24155ade776a91ba86541468b 299 Pfam PF03466 LysR substrate binding domain 88 296 1.5E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS05665 44588dc24155ade776a91ba86541468b 299 Gene3D G3DSA:1.10.10.10 2 85 4.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05665 44588dc24155ade776a91ba86541468b 299 Gene3D G3DSA:3.40.190.10 179 269 9.3E-24 T 28-03-2018 AL504_RS05665 44588dc24155ade776a91ba86541468b 299 Gene3D G3DSA:3.40.190.10 86 178 3.5E-13 T 28-03-2018 AL504_RS05665 44588dc24155ade776a91ba86541468b 299 SUPERFAMILY SSF53850 90 297 1.15E-35 T 28-03-2018 AL504_RS05665 44588dc24155ade776a91ba86541468b 299 SUPERFAMILY SSF46785 3 111 1.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05665 44588dc24155ade776a91ba86541468b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS18805 65216ab10a3bc9dc1d91abe0176772a0 210 PIRSF PIRSF006324 1 209 1.9E-52 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS18805 65216ab10a3bc9dc1d91abe0176772a0 210 Pfam PF01810 LysE type translocator 16 207 1.6E-34 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 33 88 2.6E-18 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Gene3D G3DSA:3.40.50.980 274 439 4.2E-38 T 28-03-2018 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Pfam PF00501 AMP-binding enzyme 96 534 7.8E-95 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Pfam PF13193 AMP-binding enzyme C-terminal domain 543 624 1.0E-27 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 SUPERFAMILY SSF56801 17 655 1.44E-171 T 28-03-2018 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Gene3D G3DSA:2.30.38.10 440 527 6.7E-14 T 28-03-2018 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 ProSitePatterns PS00455 Putative AMP-binding domain signature. 268 279 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 29 657 5.7E-296 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 10 659 51.7 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Gene3D G3DSA:3.30.300.30 528 643 2.8E-27 T 28-03-2018 AL504_RS11990 ac3c5806a09678d0f4eb2f2052948ce0 659 Gene3D G3DSA:3.40.50.980 81 273 2.7E-46 T 28-03-2018 AL504_RS12580 04ac7900c402077e6705b9d2de613226 204 Gene3D G3DSA:1.10.357.10 1 204 5.8E-30 T 28-03-2018 AL504_RS12580 04ac7900c402077e6705b9d2de613226 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.7E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12580 04ac7900c402077e6705b9d2de613226 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.7E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12580 04ac7900c402077e6705b9d2de613226 204 SUPERFAMILY SSF46689 12 89 4.47E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS12580 04ac7900c402077e6705b9d2de613226 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 6.8E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 SMART SM00487 23 220 7.2E-60 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 Pfam PF00271 Helicase conserved C-terminal domain 231 336 1.6E-23 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 Pfam PF00270 DEAD/DEAH box helicase 28 195 1.8E-49 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 SUPERFAMILY SSF52540 73 359 9.52E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 Gene3D G3DSA:3.40.50.300 11 218 3.0E-59 T 28-03-2018 AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 SMART SM00490 256 337 2.8E-24 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 Pfam PF03880 DbpA RNA binding domain 387 457 1.2E-21 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL504_RS02405 3768c9de989bfacfa044665a890c8c13 462 Gene3D G3DSA:3.40.50.300 219 365 1.9E-36 T 28-03-2018 AL504_RS11190 b5eb7097fdcec41d39c8e1b06d04bf43 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 144 9.9E-27 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL504_RS11190 b5eb7097fdcec41d39c8e1b06d04bf43 157 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 34 146 1.7E-48 T 28-03-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 AL504_RS11190 b5eb7097fdcec41d39c8e1b06d04bf43 157 Gene3D G3DSA:3.10.129.10 8 149 1.6E-29 T 28-03-2018 AL504_RS11190 b5eb7097fdcec41d39c8e1b06d04bf43 157 SUPERFAMILY SSF54637 14 141 9.12E-31 T 28-03-2018 IPR029069 HotDog domain AL504_RS11190 b5eb7097fdcec41d39c8e1b06d04bf43 157 Pfam PF03061 Thioesterase superfamily 63 136 9.3E-13 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS26570 361dfc7442a414d30f013fe1d399a6e3 348 SUPERFAMILY SSF51430 1 319 9.17E-104 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS26570 361dfc7442a414d30f013fe1d399a6e3 348 Pfam PF00248 Aldo/keto reductase family 15 319 1.5E-80 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS26570 361dfc7442a414d30f013fe1d399a6e3 348 Gene3D G3DSA:3.20.20.100 3 322 1.3E-101 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS21800 8dc9cd93756a25377c9d58d67ef2ae7c 216 SMART SM00947 30 200 1.9E-63 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS21800 8dc9cd93756a25377c9d58d67ef2ae7c 216 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 89 109 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS21800 8dc9cd93756a25377c9d58d67ef2ae7c 216 SUPERFAMILY SSF53056 3 209 1.13E-57 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS21800 8dc9cd93756a25377c9d58d67ef2ae7c 216 Gene3D G3DSA:3.40.1050.10 3 210 8.6E-58 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS21800 8dc9cd93756a25377c9d58d67ef2ae7c 216 Pfam PF00484 Carbonic anhydrase 37 195 3.0E-47 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL504_RS28700 e14308fda566ec3fb9f955a9aadd3d72 235 SUPERFAMILY SSF63380 9 115 4.3E-11 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS28700 e14308fda566ec3fb9f955a9aadd3d72 235 Gene3D G3DSA:2.40.30.10 6 110 4.5E-22 T 28-03-2018 AL504_RS28700 e14308fda566ec3fb9f955a9aadd3d72 235 Pfam PF08021 Siderophore-interacting FAD-binding domain 60 108 1.5E-14 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AL504_RS28700 e14308fda566ec3fb9f955a9aadd3d72 235 Gene3D G3DSA:3.40.50.80 112 235 3.9E-18 T 28-03-2018 AL504_RS28700 e14308fda566ec3fb9f955a9aadd3d72 235 Pfam PF04954 Siderophore-interacting protein 118 229 1.5E-13 T 28-03-2018 IPR007037 Siderophore-interacting protein AL504_RS12350 f14f54041ad439b13e31b7c87f4f1bf9 135 Pfam PF04266 ASCH domain 23 128 1.3E-17 T 28-03-2018 IPR007374 ASCH domain AL504_RS12350 f14f54041ad439b13e31b7c87f4f1bf9 135 SMART SM01022 13 128 3.3E-35 T 28-03-2018 IPR007374 ASCH domain AL504_RS12350 f14f54041ad439b13e31b7c87f4f1bf9 135 SUPERFAMILY SSF88697 7 130 1.04E-36 T 28-03-2018 IPR015947 PUA-like domain AL504_RS12350 f14f54041ad439b13e31b7c87f4f1bf9 135 PIRSF PIRSF021320 4 131 4.9E-36 T 28-03-2018 IPR009326 Protein of unknown function DUF984 AL504_RS12350 f14f54041ad439b13e31b7c87f4f1bf9 135 Gene3D G3DSA:3.10.400.10 1 130 5.8E-43 T 28-03-2018 AL504_RS24865 1939c5f26d078a0db98757b6eee65495 328 SUPERFAMILY SSF56436 31 327 2.59E-73 T 28-03-2018 IPR016187 C-type lectin fold AL504_RS24865 1939c5f26d078a0db98757b6eee65495 328 Pfam PF03781 Sulfatase-modifying factor enzyme 1 33 325 3.0E-63 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL504_RS24865 1939c5f26d078a0db98757b6eee65495 328 Gene3D G3DSA:3.90.1580.10 17 328 5.1E-81 T 28-03-2018 AL504_RS25590 72bbdb8ebd53c4eb4ccd804feef9c55f 237 SUPERFAMILY SSF50447 4 91 6.36E-12 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS25590 72bbdb8ebd53c4eb4ccd804feef9c55f 237 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 190 233 3.4E-12 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL504_RS25590 72bbdb8ebd53c4eb4ccd804feef9c55f 237 Gene3D G3DSA:3.30.980.10 94 237 6.6E-28 T 28-03-2018 AL504_RS25590 72bbdb8ebd53c4eb4ccd804feef9c55f 237 SMART SM00863 190 233 3.4E-15 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL504_RS25590 72bbdb8ebd53c4eb4ccd804feef9c55f 237 SUPERFAMILY SSF55186 97 234 4.32E-31 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL504_RS25590 72bbdb8ebd53c4eb4ccd804feef9c55f 237 Pfam PF01411 tRNA synthetases class II (A) 14 96 5.3E-8 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 PIRSF PIRSF002599 1 68 2.5E-25 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 Gene3D G3DSA:2.40.50.140 1 67 1.3E-26 T 28-03-2018 AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 SMART SM00357 3 67 7.9E-28 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.6E-29 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 SUPERFAMILY SSF50249 1 66 1.37E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 PRINTS PR00050 Cold shock protein signature 25 34 8.0E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 PRINTS PR00050 Cold shock protein signature 40 58 8.0E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS31200 f3c755850c44679ef4e9bd2f13eca385 68 PRINTS PR00050 Cold shock protein signature 4 19 8.0E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SMART SM00382 1072 1526 3.7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SMART SM00382 1594 1881 2.9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SMART SM00382 675 962 0.62 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:1.20.1580.10 1142 1449 1.6E-62 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SUPERFAMILY SSF52540 1577 1888 6.31E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:3.40.50.300 2 33 0.0016 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 980 1.8E-289 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:3.40.50.300 1085 1116 0.01 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SUPERFAMILY SSF52540 664 966 2.12E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:3.40.50.300 1046 1084 0.0086 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SUPERFAMILY SSF52540 482 613 2.25E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SUPERFAMILY SSF52540 6 216 2.25E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 ProSitePatterns PS00211 ABC transporters family signature. 1449 1463 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SUPERFAMILY SSF52540 1055 1253 4.04E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 SUPERFAMILY SSF52540 1392 1531 4.04E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:3.40.50.300 1571 1916 5.2E-48 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:3.40.50.300 655 1000 2.2E-49 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 ProSitePatterns PS00211 ABC transporters family signature. 1792 1806 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:3.40.50.300 34 68 0.38 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Gene3D G3DSA:1.20.1580.10 92 531 1.9E-86 T 28-03-2018 AL504_RS13995 f494c0becae5ffd108ece108d9f4d248 1919 Pfam PF00005 ABC transporter 666 894 2.6E-6 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS22920 0447b225b5100d795d362addedded538 264 Pfam PF14302 Domain of unknown function (DUF4377) 184 259 4.2E-23 T 28-03-2018 IPR025485 Domain of unknown function DUF4377 AL504_RS22920 0447b225b5100d795d362addedded538 264 Pfam PF03724 META domain 44 162 2.3E-20 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL504_RS22000 1de445eb44060a6574beed9e56bac0cd 495 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 480 2.1E-121 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS22000 1de445eb44060a6574beed9e56bac0cd 495 Pfam PF02321 Outer membrane efflux protein 291 457 7.1E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS22000 1de445eb44060a6574beed9e56bac0cd 495 Pfam PF02321 Outer membrane efflux protein 75 267 4.1E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS22000 1de445eb44060a6574beed9e56bac0cd 495 SUPERFAMILY SSF56954 66 483 3.01E-108 T 28-03-2018 AL504_RS22000 1de445eb44060a6574beed9e56bac0cd 495 SUPERFAMILY SSF56954 3 36 3.01E-108 T 28-03-2018 AL504_RS22000 1de445eb44060a6574beed9e56bac0cd 495 Gene3D G3DSA:1.20.1600.10 22 485 1.6E-106 T 28-03-2018 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 Gene3D G3DSA:1.10.287.950 68 280 6.5E-35 T 28-03-2018 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 Gene3D G3DSA:1.10.287.500 281 360 0.085 T 28-03-2018 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 SMART SM00283 56 324 9.7E-28 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 SUPERFAMILY SSF58104 62 318 2.49E-47 T 28-03-2018 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 212 1.0E-14 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 154 181 1.0E-14 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 77 106 1.0E-14 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06490 dc0d67916230c913e373f2fb924e9a67 505 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 129 284 2.1E-29 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS10855 27d03f381f905c53a251341e2703db69 326 Gene3D G3DSA:3.40.718.10 1 326 2.4E-132 T 28-03-2018 AL504_RS10855 27d03f381f905c53a251341e2703db69 326 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 324 9.2E-119 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS10855 27d03f381f905c53a251341e2703db69 326 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 5.5E-110 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS10855 27d03f381f905c53a251341e2703db69 326 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 35.996 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS10855 27d03f381f905c53a251341e2703db69 326 SUPERFAMILY SSF53659 4 325 1.7E-110 T 28-03-2018 AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 Pfam PF07729 FCD domain 100 223 4.2E-22 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 SUPERFAMILY SSF46785 6 79 1.27E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.3E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 SMART SM00345 16 75 2.1E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 Gene3D G3DSA:1.10.10.10 5 77 1.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 SUPERFAMILY SSF48008 95 233 3.14E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 Gene3D G3DSA:1.20.120.530 81 235 1.9E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 SMART SM00895 99 225 2.7E-20 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.7E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21575 bc809e42f224752319d454ad04b5ea97 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.7E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 SUPERFAMILY SSF51905 360 421 1.13E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 SUPERFAMILY SSF51905 1 54 1.13E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 SUPERFAMILY SSF51905 107 270 1.13E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 Gene3D G3DSA:3.40.50.720 1 143 2.3E-9 T 28-03-2018 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 Gene3D G3DSA:3.30.9.10 144 213 4.5E-13 T 28-03-2018 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 Gene3D G3DSA:3.30.9.10 214 359 2.1E-27 T 28-03-2018 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 Pfam PF01266 FAD dependent oxidoreductase 2 397 6.7E-77 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 50.14 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AL504_RS05335 18cccad50bca23e06c6395607c53bdec 433 SUPERFAMILY SSF54373 270 360 6.93E-18 T 28-03-2018 AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 Pfam PF00085 Thioredoxin 3 100 1.8E-25 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 PRINTS PR00421 Thioredoxin family signature 68 79 4.7E-9 T 28-03-2018 AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 PRINTS PR00421 Thioredoxin family signature 29 38 4.7E-9 T 28-03-2018 AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 PRINTS PR00421 Thioredoxin family signature 21 29 4.7E-9 T 28-03-2018 AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 PIRSF PIRSF000077 1 104 3.7E-27 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 SUPERFAMILY SSF52833 2 105 2.45E-32 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS05210 98fcd0cc3c431128ac5f4a333f7b7a66 124 Gene3D G3DSA:3.40.30.10 1 124 1.0E-33 T 28-03-2018 AL504_RS31375 5b2ad64183d659deea62309f5506b1af 415 TIGRFAM TIGR00843 benE: benzoate transporter 18 388 1.8E-114 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AL504_RS31375 5b2ad64183d659deea62309f5506b1af 415 Pfam PF03594 Benzoate membrane transport protein 18 388 5.8E-130 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AL504_RS20400 06e3cc9ebb359ce52007feef658ef156 624 SUPERFAMILY SSF51735 287 542 3.1E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20400 06e3cc9ebb359ce52007feef658ef156 624 Pfam PF02719 Polysaccharide biosynthesis protein 289 580 9.9E-123 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AL504_RS20400 06e3cc9ebb359ce52007feef658ef156 624 SUPERFAMILY SSF51735 152 274 2.64E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20400 06e3cc9ebb359ce52007feef658ef156 624 Pfam PF13727 CoA-binding domain 70 245 3.1E-13 T 28-03-2018 AL504_RS20400 06e3cc9ebb359ce52007feef658ef156 624 Gene3D G3DSA:3.40.50.720 283 618 4.8E-55 T 28-03-2018 AL504_RS20400 06e3cc9ebb359ce52007feef658ef156 624 Gene3D G3DSA:3.40.50.720 147 270 1.9E-22 T 28-03-2018 AL504_RS16425 0edde01ada5eb46c8a34229a3a4d1024 269 SUPERFAMILY SSF110399 5 247 1.7E-89 T 28-03-2018 AL504_RS16425 0edde01ada5eb46c8a34229a3a4d1024 269 Pfam PF05690 Thiazole biosynthesis protein ThiG 9 255 2.5E-106 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL504_RS16425 0edde01ada5eb46c8a34229a3a4d1024 269 Gene3D G3DSA:3.20.20.70 4 266 1.8E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS16425 0edde01ada5eb46c8a34229a3a4d1024 269 Hamap MF_00443 Thiazole synthase [thiG]. 6 262 42.067 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL504_RS12170 67aa51efae15cd6b34868118b854ee1f 355 Gene3D G3DSA:3.40.718.10 1 335 1.1E-108 T 28-03-2018 AL504_RS12170 67aa51efae15cd6b34868118b854ee1f 355 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 338 1.7E-115 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL504_RS12170 67aa51efae15cd6b34868118b854ee1f 355 SUPERFAMILY SSF53659 2 333 1.32E-106 T 28-03-2018 AL504_RS12170 67aa51efae15cd6b34868118b854ee1f 355 Pfam PF02504 Fatty acid synthesis protein 2 322 1.6E-107 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AL504_RS12170 67aa51efae15cd6b34868118b854ee1f 355 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 338 155.131 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL504_RS12170 67aa51efae15cd6b34868118b854ee1f 355 PIRSF PIRSF002465 1 338 9.0E-133 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL504_RS12875 0349cbc4112044b5b4ceb68f29242564 815 Pfam PF07715 TonB-dependent Receptor Plug Domain 159 258 7.2E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12875 0349cbc4112044b5b4ceb68f29242564 815 SUPERFAMILY SSF56935 124 815 2.24E-120 T 28-03-2018 AL504_RS12875 0349cbc4112044b5b4ceb68f29242564 815 Gene3D G3DSA:2.40.170.20 268 815 4.0E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12875 0349cbc4112044b5b4ceb68f29242564 815 SMART SM00965 68 119 3.3E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS12875 0349cbc4112044b5b4ceb68f29242564 815 Gene3D G3DSA:2.170.130.10 115 267 1.6E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12875 0349cbc4112044b5b4ceb68f29242564 815 Pfam PF00593 TonB dependent receptor 366 814 5.6E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12875 0349cbc4112044b5b4ceb68f29242564 815 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 161 814 3.6E-108 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS15245 82cdb2fc308a972647c7ff6e18a16f25 328 SUPERFAMILY SSF53850 109 288 1.75E-12 T 28-03-2018 AL504_RS15245 82cdb2fc308a972647c7ff6e18a16f25 328 PIRSF PIRSF017082 1 328 4.0E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS15245 82cdb2fc308a972647c7ff6e18a16f25 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 324 4.0E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS15245 82cdb2fc308a972647c7ff6e18a16f25 328 Gene3D G3DSA:3.40.190.10 129 238 1.1E-11 T 28-03-2018 AL504_RS19940 946a9b3d7d1cc9c6f2c2007f196d12a5 475 Gene3D G3DSA:3.40.309.10 263 458 1.5E-69 T 28-03-2018 AL504_RS19940 946a9b3d7d1cc9c6f2c2007f196d12a5 475 SUPERFAMILY SSF53720 3 473 1.05E-162 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS19940 946a9b3d7d1cc9c6f2c2007f196d12a5 475 Gene3D G3DSA:3.40.605.10 2 262 9.2E-95 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS19940 946a9b3d7d1cc9c6f2c2007f196d12a5 475 Pfam PF00171 Aldehyde dehydrogenase family 14 471 1.1E-157 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS30035 dc3255ba5feca3492aa3b317401b6153 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 109 3.8E-19 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL504_RS30035 dc3255ba5feca3492aa3b317401b6153 131 SUPERFAMILY SSF51316 1 130 3.03E-40 T 28-03-2018 IPR011057 Mss4-like AL504_RS30035 dc3255ba5feca3492aa3b317401b6153 131 Gene3D G3DSA:3.90.1590.10 1 130 8.0E-36 T 28-03-2018 AL504_RS07170 00b6713f07b4f3cdb4a321e958ef1b6a 309 Gene3D G3DSA:3.40.190.10 185 271 1.3E-28 T 28-03-2018 AL504_RS07170 00b6713f07b4f3cdb4a321e958ef1b6a 309 Gene3D G3DSA:1.10.10.10 12 96 2.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07170 00b6713f07b4f3cdb4a321e958ef1b6a 309 Pfam PF03466 LysR substrate binding domain 97 300 5.0E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07170 00b6713f07b4f3cdb4a321e958ef1b6a 309 SUPERFAMILY SSF53850 99 304 6.88E-44 T 28-03-2018 AL504_RS07170 00b6713f07b4f3cdb4a321e958ef1b6a 309 Gene3D G3DSA:3.40.190.10 101 184 1.4E-8 T 28-03-2018 AL504_RS07170 00b6713f07b4f3cdb4a321e958ef1b6a 309 SUPERFAMILY SSF46785 15 96 6.04E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07170 00b6713f07b4f3cdb4a321e958ef1b6a 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 72 5.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16665 9d24e5f975c17c8a758480369fd13e97 314 Gene3D G3DSA:3.40.630.10 26 260 3.3E-13 T 28-03-2018 AL504_RS16665 9d24e5f975c17c8a758480369fd13e97 314 SUPERFAMILY SSF53187 3 310 1.62E-56 T 28-03-2018 AL504_RS16665 9d24e5f975c17c8a758480369fd13e97 314 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 31 198 1.1E-12 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL504_RS06720 2fd44c386f5e6e55eb4dc96a52e74033 206 Gene3D G3DSA:3.40.1410.10 6 188 4.7E-41 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS06720 2fd44c386f5e6e55eb4dc96a52e74033 206 Pfam PF04345 Chorismate lyase 23 188 4.7E-20 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AL504_RS06720 2fd44c386f5e6e55eb4dc96a52e74033 206 SUPERFAMILY SSF64288 11 187 1.41E-41 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS06720 2fd44c386f5e6e55eb4dc96a52e74033 206 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 13 189 24.258 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AL504_RS10035 a568b373d765b910bb667097402f4658 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 151 1.0E-28 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS14220 638cee5ed7011e1ea643c56a03c5f8f8 233 SUPERFAMILY SSF52540 33 206 3.88E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14220 638cee5ed7011e1ea643c56a03c5f8f8 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 4 226 8.8E-68 T 28-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AL504_RS14220 638cee5ed7011e1ea643c56a03c5f8f8 233 Pfam PF00308 Bacterial dnaA protein 17 206 7.0E-11 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AL504_RS14220 638cee5ed7011e1ea643c56a03c5f8f8 233 Gene3D G3DSA:1.10.8.60 161 226 3.3E-13 T 28-03-2018 AL504_RS14220 638cee5ed7011e1ea643c56a03c5f8f8 233 Gene3D G3DSA:3.40.50.300 14 158 3.4E-7 T 28-03-2018 AL504_RS26185 25dae991355bf168f044fb8469480d22 560 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 173 8.4E-53 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS26185 25dae991355bf168f044fb8469480d22 560 SUPERFAMILY SSF52467 158 357 1.59E-35 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS26185 25dae991355bf168f044fb8469480d22 560 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 328 3.8E-25 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS26185 25dae991355bf168f044fb8469480d22 560 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 389 535 6.7E-45 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS26185 25dae991355bf168f044fb8469480d22 560 SUPERFAMILY SSF52518 9 179 1.09E-51 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS26185 25dae991355bf168f044fb8469480d22 560 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL504_RS26185 25dae991355bf168f044fb8469480d22 560 Gene3D G3DSA:3.40.50.970 348 547 2.5E-44 T 28-03-2018 AL504_RS26185 25dae991355bf168f044fb8469480d22 560 Gene3D G3DSA:3.40.50.1220 191 347 6.3E-31 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS26185 25dae991355bf168f044fb8469480d22 560 Gene3D G3DSA:3.40.50.970 1 189 5.7E-50 T 28-03-2018 AL504_RS26185 25dae991355bf168f044fb8469480d22 560 SUPERFAMILY SSF52518 367 544 6.79E-61 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS30740 3b2d0ebc23f193ef5f72a63afa54405b 162 Pfam PF04542 Sigma-70 region 2 10 73 1.4E-7 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS30740 3b2d0ebc23f193ef5f72a63afa54405b 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 157 3.1E-19 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS30740 3b2d0ebc23f193ef5f72a63afa54405b 162 SUPERFAMILY SSF88946 5 84 1.26E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS30740 3b2d0ebc23f193ef5f72a63afa54405b 162 SUPERFAMILY SSF88659 90 160 5.45E-10 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS30740 3b2d0ebc23f193ef5f72a63afa54405b 162 Gene3D G3DSA:1.10.1740.10 2 69 3.1E-14 T 28-03-2018 AL504_RS30740 3b2d0ebc23f193ef5f72a63afa54405b 162 Gene3D G3DSA:1.10.10.10 70 162 3.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30740 3b2d0ebc23f193ef5f72a63afa54405b 162 Pfam PF08281 Sigma-70, region 4 105 156 1.2E-8 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 SUPERFAMILY SSF52425 2 187 5.63E-52 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 PRINTS PR00147 DNA photolyase signature 326 342 1.2E-24 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 PRINTS PR00147 DNA photolyase signature 385 399 1.2E-24 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 PRINTS PR00147 DNA photolyase signature 142 158 1.2E-24 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 PRINTS PR00147 DNA photolyase signature 346 364 1.2E-24 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 326 338 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 Gene3D G3DSA:3.40.50.620 1 130 1.3E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 Pfam PF00875 DNA photolyase 4 171 3.0E-45 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 Pfam PF03441 FAD binding domain of DNA photolyase 276 466 1.4E-77 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 Gene3D G3DSA:1.10.579.10 294 470 4.8E-68 T 28-03-2018 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 Gene3D G3DSA:1.25.40.80 132 292 1.1E-37 T 28-03-2018 AL504_RS02380 db26ba8089fbc02082be9d458aa0b51b 472 SUPERFAMILY SSF48173 196 467 3.4E-101 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 Pfam PF01180 Dihydroorotate dehydrogenase 53 340 2.0E-87 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 300 320 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 7 344 49.015 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 8 345 1.4E-123 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 SUPERFAMILY SSF51395 8 343 2.1E-102 T 28-03-2018 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 PIRSF PIRSF000164 16 346 1.5E-96 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 85 104 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL504_RS13580 b913c6686ee0b67549e8fdc78566e99b 346 Gene3D G3DSA:3.20.20.70 2 346 1.5E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS28155 0f77c6dc899a85fc4f589e6b8f077d41 52 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 9.9E-12 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL504_RS28155 0f77c6dc899a85fc4f589e6b8f077d41 52 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 6.4E-17 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 Gene3D G3DSA:3.30.565.10 312 464 2.8E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 Gene3D G3DSA:1.10.287.130 235 304 1.2E-13 T 28-03-2018 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 SUPERFAMILY SSF47384 228 306 1.16E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 SMART SM00387 351 463 1.3E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 SUPERFAMILY SSF158472 189 243 2.88E-8 T 28-03-2018 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 6.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 6.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 6.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 6.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 307 3.5E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 461 3.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 SMART SM00388 245 308 7.0E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 Pfam PF00672 HAMP domain 189 241 1.4E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 SMART SM00304 189 244 4.3E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS00170 2f3b43183a1b1f0543c3d34299827a9e 464 SUPERFAMILY SSF55874 302 461 5.63E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS14535 605ec0b7d20a12d0ed0f99b5fb939540 146 Gene3D G3DSA:1.10.10.10 2 88 1.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14535 605ec0b7d20a12d0ed0f99b5fb939540 146 Pfam PF01475 Ferric uptake regulator family 9 128 7.7E-38 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL504_RS14535 605ec0b7d20a12d0ed0f99b5fb939540 146 SUPERFAMILY SSF46785 5 132 7.91E-38 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21225 303dd93b0c527237f1f818c25959ca25 239 Gene3D G3DSA:3.20.20.10 3 239 2.2E-70 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS21225 303dd93b0c527237f1f818c25959ca25 239 Pfam PF01168 Alanine racemase, N-terminal domain 11 233 3.4E-26 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS21225 303dd93b0c527237f1f818c25959ca25 239 SUPERFAMILY SSF51419 4 231 9.03E-74 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS21225 303dd93b0c527237f1f818c25959ca25 239 PIRSF PIRSF004848 1 239 1.4E-73 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL504_RS21225 303dd93b0c527237f1f818c25959ca25 239 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 9 233 1.2E-54 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL504_RS24935 6e7b4325e7a000d0b82b47a24122810a 296 Gene3D G3DSA:3.40.190.10 89 178 4.4E-24 T 28-03-2018 AL504_RS24935 6e7b4325e7a000d0b82b47a24122810a 296 Gene3D G3DSA:1.10.10.10 1 88 1.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24935 6e7b4325e7a000d0b82b47a24122810a 296 Pfam PF03466 LysR substrate binding domain 89 290 2.4E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24935 6e7b4325e7a000d0b82b47a24122810a 296 Gene3D G3DSA:3.40.190.10 179 269 1.9E-19 T 28-03-2018 AL504_RS24935 6e7b4325e7a000d0b82b47a24122810a 296 SUPERFAMILY SSF53850 89 291 8.36E-39 T 28-03-2018 AL504_RS24935 6e7b4325e7a000d0b82b47a24122810a 296 SUPERFAMILY SSF46785 1 113 8.16E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24935 6e7b4325e7a000d0b82b47a24122810a 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04655 af61e7eb83a4560d228d0f0051e3a6b0 201 SUPERFAMILY SSF53474 6 171 4.82E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS04655 af61e7eb83a4560d228d0f0051e3a6b0 201 Gene3D G3DSA:3.40.50.1820 6 180 3.6E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS04655 af61e7eb83a4560d228d0f0051e3a6b0 201 Pfam PF06821 Serine hydrolase 6 171 9.0E-66 T 28-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AL504_RS15055 c093b5058773478e0b2a2226fd7f339c 114 Pfam PF04273 Putative phosphatase (DUF442) 7 113 4.1E-33 T 28-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AL504_RS15055 c093b5058773478e0b2a2226fd7f339c 114 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 5 111 1.6E-30 T 28-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AL504_RS15055 c093b5058773478e0b2a2226fd7f339c 114 Gene3D G3DSA:3.90.190.10 1 112 2.8E-5 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 SUPERFAMILY SSF52172 15 165 8.82E-27 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 220 4.4E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 Gene3D G3DSA:1.10.10.10 131 227 3.6E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 4.4E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 4.4E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 4.4E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 SUPERFAMILY SSF46894 154 226 3.4E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 Pfam PF00072 Response regulator receiver domain 16 121 5.6E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 SMART SM00421 163 220 6.9E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 SMART SM00448 14 128 1.9E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS25225 6d4616c077ddd35535e315dc9b42a06e 227 Gene3D G3DSA:3.40.50.2300 8 130 1.9E-24 T 28-03-2018 AL504_RS24665 8f18dcc62f81201a72bcca85b50a9fd4 347 PRINTS PR01270 Histone deacetylase superfamily signature 161 184 1.4E-13 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS24665 8f18dcc62f81201a72bcca85b50a9fd4 347 PRINTS PR01270 Histone deacetylase superfamily signature 280 290 1.4E-13 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS24665 8f18dcc62f81201a72bcca85b50a9fd4 347 PRINTS PR01270 Histone deacetylase superfamily signature 194 209 1.4E-13 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS24665 8f18dcc62f81201a72bcca85b50a9fd4 347 Pfam PF00850 Histone deacetylase domain 28 343 3.7E-64 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS24665 8f18dcc62f81201a72bcca85b50a9fd4 347 SUPERFAMILY SSF52768 2 347 3.84E-86 T 28-03-2018 AL504_RS24665 8f18dcc62f81201a72bcca85b50a9fd4 347 Gene3D G3DSA:3.40.800.20 1 347 1.5E-80 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS23510 9e8913f088718889da199500672470e0 143 SUPERFAMILY SSF55298 13 140 7.07E-33 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS23510 9e8913f088718889da199500672470e0 143 Gene3D G3DSA:3.30.1330.40 3 143 7.4E-33 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS23510 9e8913f088718889da199500672470e0 143 Pfam PF01042 Endoribonuclease L-PSP 16 138 3.7E-26 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS18800 3a9f2c75194cdaf6ef1f7d433b32e5eb 191 SUPERFAMILY SSF52499 5 190 8.11E-37 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS18800 3a9f2c75194cdaf6ef1f7d433b32e5eb 191 Gene3D G3DSA:3.40.50.850 1 191 1.3E-29 T 28-03-2018 AL504_RS18800 3a9f2c75194cdaf6ef1f7d433b32e5eb 191 Pfam PF00857 Isochorismatase family 13 184 2.8E-18 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS27800 e79d83393da3a7e933ec5828acd77995 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 70 129 0.001 T 28-03-2018 AL504_RS27800 e79d83393da3a7e933ec5828acd77995 173 Pfam PF13827 Domain of unknown function (DUF4189) 72 166 6.0E-18 T 28-03-2018 IPR025240 Domain of unknown function DUF4189 AL504_RS14070 4a9ebcd1a90a5bc0cfdebf6870d0c0e5 215 SUPERFAMILY SSF110857 39 154 5.49E-11 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL504_RS14070 4a9ebcd1a90a5bc0cfdebf6870d0c0e5 215 Gene3D G3DSA:3.10.490.10 23 210 7.1E-34 T 28-03-2018 AL504_RS14070 4a9ebcd1a90a5bc0cfdebf6870d0c0e5 215 Pfam PF04752 ChaC-like protein 39 204 3.9E-41 T 28-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 AL504_RS02735 5f9690ffdc516414acd59ae0bb5aa59c 296 Pfam PF01136 Peptidase family U32 112 247 5.9E-11 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL504_RS25620 27d361175e9d7ab78744ffc03073f7db 113 SMART SM01323 19 105 2.3E-43 T 28-03-2018 IPR003849 Preprotein translocase YajC AL504_RS25620 27d361175e9d7ab78744ffc03073f7db 113 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 4.3E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC AL504_RS25620 27d361175e9d7ab78744ffc03073f7db 113 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 4.3E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC AL504_RS25620 27d361175e9d7ab78744ffc03073f7db 113 Pfam PF02699 Preprotein translocase subunit 23 102 7.2E-31 T 28-03-2018 IPR003849 Preprotein translocase YajC AL504_RS25620 27d361175e9d7ab78744ffc03073f7db 113 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 105 8.3E-25 T 28-03-2018 IPR003849 Preprotein translocase YajC AL504_RS11480 6d00b674e2e7c53595e3b80273c2a6e9 297 Gene3D G3DSA:1.20.1510.10 14 209 1.7E-56 T 28-03-2018 AL504_RS11480 6d00b674e2e7c53595e3b80273c2a6e9 297 Pfam PF01545 Cation efflux family 18 209 5.0E-43 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL504_RS11480 6d00b674e2e7c53595e3b80273c2a6e9 297 Gene3D G3DSA:3.30.70.1350 211 290 5.2E-10 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AL504_RS11480 6d00b674e2e7c53595e3b80273c2a6e9 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 288 1.1E-83 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL504_RS11480 6d00b674e2e7c53595e3b80273c2a6e9 297 SUPERFAMILY SSF160240 214 286 5.23E-7 T 28-03-2018 AL504_RS11480 6d00b674e2e7c53595e3b80273c2a6e9 297 SUPERFAMILY SSF161111 16 210 2.22E-54 T 28-03-2018 AL504_RS07335 216fdf9c17e39b75173a695853ea1c73 261 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 210 2.3E-36 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS07335 216fdf9c17e39b75173a695853ea1c73 261 SMART SM01007 32 210 3.4E-41 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS07335 216fdf9c17e39b75173a695853ea1c73 261 Gene3D G3DSA:3.40.225.10 26 253 1.5E-46 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS07335 216fdf9c17e39b75173a695853ea1c73 261 SUPERFAMILY SSF53639 29 235 1.94E-52 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS04985 9ca52d3038f15947ae1b83f4a6ec8173 235 Pfam PF00005 ABC transporter 18 162 2.0E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04985 9ca52d3038f15947ae1b83f4a6ec8173 235 SUPERFAMILY SSF52540 2 233 1.07E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04985 9ca52d3038f15947ae1b83f4a6ec8173 235 SMART SM00382 26 215 1.6E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04985 9ca52d3038f15947ae1b83f4a6ec8173 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04985 9ca52d3038f15947ae1b83f4a6ec8173 235 Gene3D G3DSA:3.40.50.300 1 235 8.8E-55 T 28-03-2018 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 Gene3D G3DSA:3.40.50.970 1 293 1.8E-81 T 28-03-2018 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 SUPERFAMILY SSF52518 3 345 1.68E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 SUPERFAMILY SSF52922 487 613 6.15E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 616 45.474 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 Gene3D G3DSA:3.40.50.970 294 482 2.9E-59 T 28-03-2018 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 SMART SM00861 315 479 4.5E-59 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 613 1.5E-259 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 ProSitePatterns PS00802 Transketolase signature 2. 421 437 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 Pfam PF02779 Transketolase, pyrimidine binding domain 316 474 6.9E-37 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 278 3.6E-120 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 Gene3D G3DSA:3.40.50.920 491 616 1.7E-34 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 SUPERFAMILY SSF52518 291 474 1.81E-56 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS10905 82562dd65d0daadbcfe03afdb0cc2cfb 620 Pfam PF02780 Transketolase, C-terminal domain 491 607 5.9E-27 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL504_RS30350 6c3ca3d9bba37c0261349c850f69656e 87 Gene3D G3DSA:1.20.58.110 1 87 4.2E-28 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS30350 6c3ca3d9bba37c0261349c850f69656e 87 Pfam PF01649 Ribosomal protein S20 2 84 9.2E-26 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS30350 6c3ca3d9bba37c0261349c850f69656e 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.1E-28 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS30350 6c3ca3d9bba37c0261349c850f69656e 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.465 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS30350 6c3ca3d9bba37c0261349c850f69656e 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 4.0E-31 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS30350 6c3ca3d9bba37c0261349c850f69656e 87 SUPERFAMILY SSF46992 3 86 7.72E-30 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS29335 0d4f50b6bfd20d7a539937fc648b86be 538 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 182 500 1.3E-19 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AL504_RS29335 0d4f50b6bfd20d7a539937fc648b86be 538 Pfam PF08479 POTRA domain, ShlB-type 46 119 7.6E-16 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AL504_RS29335 0d4f50b6bfd20d7a539937fc648b86be 538 Gene3D G3DSA:2.40.160.50 151 538 1.1E-50 T 28-03-2018 AL504_RS29335 0d4f50b6bfd20d7a539937fc648b86be 538 Gene3D G3DSA:3.10.20.310 51 119 7.3E-13 T 28-03-2018 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.2E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 Gene3D G3DSA:3.40.190.10 91 178 9.1E-17 T 28-03-2018 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 SUPERFAMILY SSF53850 87 300 3.62E-25 T 28-03-2018 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 Pfam PF03466 LysR substrate binding domain 87 289 1.7E-21 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 Gene3D G3DSA:3.40.190.10 179 266 7.8E-5 T 28-03-2018 AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 Gene3D G3DSA:1.10.10.10 1 90 8.0E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07220 764f6936494f706bde4568c235be4d7c 319 SUPERFAMILY SSF46785 1 111 3.41E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17270 0f78250b04e857da5f1c9c847467d62f 441 Pfam PF11737 Protein of unknown function (DUF3300) 30 265 9.7E-92 T 28-03-2018 IPR021728 Protein of unknown function DUF3300 AL504_RS05450 78da763e3d8048af0cb97589d698a5b6 270 SUPERFAMILY SSF161098 6 269 7.46E-64 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05450 78da763e3d8048af0cb97589d698a5b6 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 259 4.0E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05450 78da763e3d8048af0cb97589d698a5b6 270 Gene3D G3DSA:1.10.3720.10 6 263 7.2E-41 T 28-03-2018 AL504_RS21065 ca28918d81384a88be2aa21b3ff3929a 160 Gene3D G3DSA:3.40.1350.10 49 160 1.0E-30 T 28-03-2018 AL504_RS21065 ca28918d81384a88be2aa21b3ff3929a 160 Hamap MF_00048 UPF0102 protein YraN [yraN]. 43 158 21.073 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL504_RS21065 ca28918d81384a88be2aa21b3ff3929a 160 SUPERFAMILY SSF52980 45 148 6.3E-16 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS21065 ca28918d81384a88be2aa21b3ff3929a 160 Pfam PF02021 Uncharacterised protein family UPF0102 51 144 5.0E-24 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL504_RS21065 ca28918d81384a88be2aa21b3ff3929a 160 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 41 158 1.3E-24 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL504_RS25240 dd3d1d28c9fcd8c2311df48c29311a4c 733 Gene3D G3DSA:2.170.130.10 36 172 6.5E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS25240 dd3d1d28c9fcd8c2311df48c29311a4c 733 Gene3D G3DSA:2.40.170.20 181 733 8.2E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS25240 dd3d1d28c9fcd8c2311df48c29311a4c 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 733 1.5E-67 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS25240 dd3d1d28c9fcd8c2311df48c29311a4c 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 166 3.9E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS25240 dd3d1d28c9fcd8c2311df48c29311a4c 733 SUPERFAMILY SSF56935 48 733 7.33E-115 T 28-03-2018 AL504_RS25240 dd3d1d28c9fcd8c2311df48c29311a4c 733 Pfam PF00593 TonB dependent receptor 292 731 3.1E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 SUPERFAMILY SSF53335 4 256 1.07E-73 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 SMART SM00650 20 188 3.0E-80 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 5 253 3.9E-82 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 Gene3D G3DSA:1.10.8.100 201 258 9.8E-16 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 Gene3D G3DSA:3.40.50.150 1 200 2.8E-54 T 28-03-2018 AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 253 5.3E-58 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AL504_RS14405 fc9838ef8f9c12ffdefae945a19f5eef 263 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 255 54.081 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL504_RS05090 6e4f33e0f04ecdd61d843d7731a5f40e 177 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 1 161 4.2E-26 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS05090 6e4f33e0f04ecdd61d843d7731a5f40e 177 Gene3D G3DSA:3.40.50.1110 1 177 7.5E-38 T 28-03-2018 AL504_RS05090 6e4f33e0f04ecdd61d843d7731a5f40e 177 SUPERFAMILY SSF52266 1 176 1.83E-48 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 8.6E-40 T 28-03-2018 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 8.6E-40 T 28-03-2018 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 8.6E-40 T 28-03-2018 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.6E-40 T 28-03-2018 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 8.6E-40 T 28-03-2018 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 Gene3D G3DSA:3.50.50.60 237 318 0.0011 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 2.2E-73 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 1.5E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 Gene3D G3DSA:3.50.50.60 132 236 3.1E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 Gene3D G3DSA:3.50.50.60 1 131 4.7E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 1.9E-119 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AL504_RS13290 c184b371e59ae5061c63a1abab284ca9 319 SUPERFAMILY SSF51905 1 314 1.69E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS18085 cdba9273572e06ac220027146aa1b317 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 188 8.8E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS18085 cdba9273572e06ac220027146aa1b317 203 Gene3D G3DSA:1.20.1050.10 88 203 4.4E-22 T 28-03-2018 AL504_RS18085 cdba9273572e06ac220027146aa1b317 203 SUPERFAMILY SSF47616 73 202 1.67E-23 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS18085 cdba9273572e06ac220027146aa1b317 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 7.2E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS18085 cdba9273572e06ac220027146aa1b317 203 SUPERFAMILY SSF52833 1 101 9.42E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS18085 cdba9273572e06ac220027146aa1b317 203 Gene3D G3DSA:3.40.30.10 1 87 5.1E-27 T 28-03-2018 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 Gene3D G3DSA:1.10.1040.10 186 279 3.2E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 SUPERFAMILY SSF48179 186 293 2.55E-26 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 Gene3D G3DSA:3.40.50.720 2 185 7.3E-51 T 28-03-2018 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 184 1.7E-62 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 SUPERFAMILY SSF48179 414 498 1.7E-19 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 SUPERFAMILY SSF51735 1 186 1.35E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 284 6.6E-24 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 499 2.7E-20 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 Gene3D G3DSA:3.40.50.720 280 416 0.084 T 28-03-2018 AL504_RS16760 d25279ab9349fae5b098a3c556d79198 508 Gene3D G3DSA:1.10.1040.10 417 506 2.1E-18 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 Gene3D G3DSA:1.10.10.10 2 91 2.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 Gene3D G3DSA:3.40.190.10 181 266 3.0E-9 T 28-03-2018 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 Pfam PF03466 LysR substrate binding domain 95 292 1.3E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 SUPERFAMILY SSF53850 90 292 3.58E-37 T 28-03-2018 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 Gene3D G3DSA:3.40.190.10 94 180 2.6E-15 T 28-03-2018 AL504_RS04165 0b4a41e42b5763a1a465cc80dc6dd8af 295 SUPERFAMILY SSF46785 5 85 2.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 Gene3D G3DSA:3.90.480.10 49 196 2.6E-19 T 28-03-2018 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 Gene3D G3DSA:3.90.480.10 213 404 8.7E-31 T 28-03-2018 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 SUPERFAMILY SSF55124 1 125 1.8E-29 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 Gene3D G3DSA:3.30.413.10 405 579 1.3E-31 T 28-03-2018 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 271 5.3E-40 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 411 562 2.0E-8 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 327 398 9.4E-18 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 1.2E-15 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 SUPERFAMILY SSF56014 408 563 1.83E-35 T 28-03-2018 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 SUPERFAMILY SSF55124 251 275 2.45E-26 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 SUPERFAMILY SSF55124 315 421 2.45E-26 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL504_RS21710 4e833c3909ea4599552b8fee4964903b 579 SUPERFAMILY SSF56014 120 281 1.01E-46 T 28-03-2018 AL504_RS22670 555fd6f4e75be5c5e29ccd5e19499a5e 602 Pfam PF01435 Peptidase family M48 125 310 1.2E-12 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL504_RS22670 555fd6f4e75be5c5e29ccd5e19499a5e 602 Gene3D G3DSA:1.25.40.10 384 520 2.4E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS22670 555fd6f4e75be5c5e29ccd5e19499a5e 602 Gene3D G3DSA:3.30.2010.10 79 167 7.1E-10 T 28-03-2018 AL504_RS24200 84287772d473d3b1677d10af1426b977 826 Gene3D G3DSA:2.170.130.10 127 279 9.8E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24200 84287772d473d3b1677d10af1426b977 826 Pfam PF00593 TonB dependent receptor 363 823 5.2E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24200 84287772d473d3b1677d10af1426b977 826 SUPERFAMILY SSF56935 130 824 4.0E-124 T 28-03-2018 AL504_RS24200 84287772d473d3b1677d10af1426b977 826 Pfam PF07715 TonB-dependent Receptor Plug Domain 170 272 1.0E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24200 84287772d473d3b1677d10af1426b977 826 Gene3D G3DSA:2.40.170.20 280 825 7.1E-80 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24200 84287772d473d3b1677d10af1426b977 826 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 172 823 6.7E-110 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS24200 84287772d473d3b1677d10af1426b977 826 SMART SM00965 71 122 4.8E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS00245 6fa33599abaca8d00f626398db267282 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 129 9.3E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS00245 6fa33599abaca8d00f626398db267282 152 Gene3D G3DSA:3.10.180.10 1 147 1.5E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS00245 6fa33599abaca8d00f626398db267282 152 SUPERFAMILY SSF54593 5 134 1.79E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS03185 4ef03947228a58b89c3499df934caaa7 174 SUPERFAMILY SSF88659 104 167 5.05E-10 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03185 4ef03947228a58b89c3499df934caaa7 174 Gene3D G3DSA:1.10.10.10 112 164 4.3E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03185 4ef03947228a58b89c3499df934caaa7 174 Gene3D G3DSA:1.10.1740.10 6 96 2.7E-16 T 28-03-2018 AL504_RS03185 4ef03947228a58b89c3499df934caaa7 174 Pfam PF04542 Sigma-70 region 2 15 80 1.4E-13 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03185 4ef03947228a58b89c3499df934caaa7 174 Pfam PF08281 Sigma-70, region 4 114 159 5.8E-10 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03185 4ef03947228a58b89c3499df934caaa7 174 SUPERFAMILY SSF88946 11 90 1.23E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03185 4ef03947228a58b89c3499df934caaa7 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 153 2.3E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 3.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 3.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 3.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 SUPERFAMILY SSF51735 2 235 3.82E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 Gene3D G3DSA:3.40.50.720 1 39 6.6E-7 T 28-03-2018 AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 Gene3D G3DSA:3.40.50.720 40 239 6.7E-55 T 28-03-2018 AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 171 0.0049 T 28-03-2018 AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30240 0a11d5f4289d62c72f8b71475026b92c 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 232 3.7E-51 T 28-03-2018 AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 Gene3D G3DSA:1.10.8.350 92 194 2.2E-32 T 28-03-2018 AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 SUPERFAMILY SSF53955 10 324 6.89E-98 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 Gene3D G3DSA:1.10.101.10 324 404 7.5E-16 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 25 320 5.6E-106 T 28-03-2018 IPR011970 Lytic murein transglycosylase AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 Gene3D G3DSA:1.10.530.10 200 323 2.7E-32 T 28-03-2018 AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 SUPERFAMILY SSF47090 324 394 1.99E-17 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 Pfam PF01471 Putative peptidoglycan binding domain 338 393 9.2E-13 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL504_RS11490 7894a9dfe6f41e29f4b253512f05e3af 409 Pfam PF13406 Transglycosylase SLT domain 26 317 4.7E-99 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 AL504_RS11100 698a1fc54cf364c6a4bc93674fd29274 299 SUPERFAMILY SSF46785 3 111 1.18E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11100 698a1fc54cf364c6a4bc93674fd29274 299 Gene3D G3DSA:3.40.190.10 176 262 2.8E-24 T 28-03-2018 AL504_RS11100 698a1fc54cf364c6a4bc93674fd29274 299 Gene3D G3DSA:1.10.10.10 3 84 3.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11100 698a1fc54cf364c6a4bc93674fd29274 299 Gene3D G3DSA:3.40.190.10 89 175 1.8E-11 T 28-03-2018 AL504_RS11100 698a1fc54cf364c6a4bc93674fd29274 299 Pfam PF03466 LysR substrate binding domain 89 291 2.3E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS11100 698a1fc54cf364c6a4bc93674fd29274 299 SUPERFAMILY SSF53850 89 297 3.98E-44 T 28-03-2018 AL504_RS11100 698a1fc54cf364c6a4bc93674fd29274 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 7.7E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00190 8bf566b4b89f3a24ce0c4c6a4fb2f050 324 SUPERFAMILY SSF81345 5 316 5.62E-60 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS00190 8bf566b4b89f3a24ce0c4c6a4fb2f050 324 Pfam PF01032 FecCD transport family 14 316 5.6E-63 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS00190 8bf566b4b89f3a24ce0c4c6a4fb2f050 324 Gene3D G3DSA:1.10.3470.10 3 322 1.0E-41 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS02715 5855135e99e4832a2570bd52522ab8a8 165 Gene3D G3DSA:3.40.50.300 1 164 2.6E-30 T 28-03-2018 AL504_RS02715 5855135e99e4832a2570bd52522ab8a8 165 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 160 9.1E-46 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL504_RS02715 5855135e99e4832a2570bd52522ab8a8 165 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 136 1.1E-49 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL504_RS02715 5855135e99e4832a2570bd52522ab8a8 165 SUPERFAMILY SSF52540 3 161 8.39E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS22745 898cbee8bd693c5a0adf773e80b48fdf 471 Pfam PF00890 FAD binding domain 3 431 1.2E-34 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS22745 898cbee8bd693c5a0adf773e80b48fdf 471 SUPERFAMILY SSF51905 394 458 4.45E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22745 898cbee8bd693c5a0adf773e80b48fdf 471 SUPERFAMILY SSF51905 2 230 4.45E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22745 898cbee8bd693c5a0adf773e80b48fdf 471 SUPERFAMILY SSF56425 234 395 2.41E-22 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL504_RS22745 898cbee8bd693c5a0adf773e80b48fdf 471 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 2 458 1.1E-210 T 28-03-2018 IPR012831 Precorrin 3B synthase CobZ AL504_RS22745 898cbee8bd693c5a0adf773e80b48fdf 471 Gene3D G3DSA:3.50.50.60 1 251 2.8E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22745 898cbee8bd693c5a0adf773e80b48fdf 471 Gene3D G3DSA:3.90.700.10 259 398 1.5E-27 T 28-03-2018 AL504_RS28865 199c2212d1fc9c8ba77553d9441a59a4 284 SUPERFAMILY SSF56529 60 277 3.79E-82 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS28865 199c2212d1fc9c8ba77553d9441a59a4 284 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 276 1.4E-72 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS28865 199c2212d1fc9c8ba77553d9441a59a4 284 Gene3D G3DSA:3.90.850.10 19 284 5.4E-83 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS21560 ae0f8fbf2eb56bbd9f12a48488a1b845 325 SUPERFAMILY SSF51735 1 318 3.81E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21560 ae0f8fbf2eb56bbd9f12a48488a1b845 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 205 5.9E-25 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS21560 ae0f8fbf2eb56bbd9f12a48488a1b845 325 Gene3D G3DSA:3.40.50.720 1 184 3.2E-33 T 28-03-2018 AL504_RS21560 ae0f8fbf2eb56bbd9f12a48488a1b845 325 Gene3D G3DSA:3.90.25.10 185 289 1.6E-42 T 28-03-2018 AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 Pfam PF03466 LysR substrate binding domain 98 308 4.4E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 Gene3D G3DSA:1.10.10.10 7 94 1.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 Gene3D G3DSA:3.40.190.10 193 278 2.9E-12 T 28-03-2018 AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 Gene3D G3DSA:3.40.190.10 101 192 3.1E-12 T 28-03-2018 AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 SUPERFAMILY SSF46785 11 121 1.31E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 1.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS25930 082bcdc02c3207c3970dbcea9de222e6 319 SUPERFAMILY SSF53850 100 313 5.61E-27 T 28-03-2018 AL504_RS29965 70881681a44cc0b5affaffe2cf77cfd9 579 SUPERFAMILY SSF53187 322 464 1.16E-17 T 28-03-2018 AL504_RS29965 70881681a44cc0b5affaffe2cf77cfd9 579 Gene3D G3DSA:3.40.630.10 332 488 8.5E-10 T 28-03-2018 AL504_RS26695 aac453a1d8e5b9e37dc6c13da184c07a 96 SUPERFAMILY SSF54909 1 96 5.37E-30 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS26695 aac453a1d8e5b9e37dc6c13da184c07a 96 Gene3D G3DSA:3.30.70.100 1 96 1.6E-21 T 28-03-2018 AL504_RS26695 aac453a1d8e5b9e37dc6c13da184c07a 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 1.6E-12 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL504_RS18765 e60576fc35349066c52b8e337d671456 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS18765 e60576fc35349066c52b8e337d671456 550 Gene3D G3DSA:3.40.50.980 197 352 2.6E-35 T 28-03-2018 AL504_RS18765 e60576fc35349066c52b8e337d671456 550 Gene3D G3DSA:3.40.50.980 23 196 3.1E-35 T 28-03-2018 AL504_RS18765 e60576fc35349066c52b8e337d671456 550 SUPERFAMILY SSF56801 14 543 4.32E-144 T 28-03-2018 AL504_RS18765 e60576fc35349066c52b8e337d671456 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 530 2.2E-22 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS18765 e60576fc35349066c52b8e337d671456 550 Gene3D G3DSA:3.30.300.30 441 541 3.9E-30 T 28-03-2018 AL504_RS18765 e60576fc35349066c52b8e337d671456 550 Pfam PF00501 AMP-binding enzyme 28 447 1.5E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS18765 e60576fc35349066c52b8e337d671456 550 Gene3D G3DSA:2.30.38.10 368 440 1.3E-20 T 28-03-2018 AL504_RS28290 440d556268a608d5318e824f17dc2360 240 SUPERFAMILY SSF52096 4 238 4.19E-39 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS28290 440d556268a608d5318e824f17dc2360 240 Gene3D G3DSA:3.90.226.10 1 226 2.9E-37 T 28-03-2018 AL504_RS28290 440d556268a608d5318e824f17dc2360 240 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 210 4.3E-26 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS22510 2ecda667b8b0a376960ee634e793da46 351 Pfam PF01904 Protein of unknown function DUF72 79 347 1.8E-38 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS22510 2ecda667b8b0a376960ee634e793da46 351 Gene3D G3DSA:3.20.20.410 46 351 2.0E-54 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS22510 2ecda667b8b0a376960ee634e793da46 351 SUPERFAMILY SSF117396 57 349 1.57E-45 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS18775 7be469fdcde3f6710a3a460b2b2968cc 310 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 1.3E-9 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS18775 7be469fdcde3f6710a3a460b2b2968cc 310 PIRSF PIRSF018266 1 310 2.6E-63 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS18775 7be469fdcde3f6710a3a460b2b2968cc 310 Pfam PF04773 FecR protein 107 194 9.3E-12 T 28-03-2018 IPR006860 FecR protein AL504_RS19965 7f05c17ab6b7e14dc581b025602ea05d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.559 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AL504_RS19965 7f05c17ab6b7e14dc581b025602ea05d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.1E-28 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19965 7f05c17ab6b7e14dc581b025602ea05d 101 SUPERFAMILY SSF57716 2 101 3.85E-39 T 28-03-2018 AL504_RS19965 7f05c17ab6b7e14dc581b025602ea05d 101 Gene3D G3DSA:4.10.830.10 1 101 5.5E-35 T 28-03-2018 AL504_RS19155 9fdf941e9d85f218b0b3f1fe8656f603 288 SUPERFAMILY SSF161098 7 278 1.7E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19155 9fdf941e9d85f218b0b3f1fe8656f603 288 Gene3D G3DSA:1.10.3720.10 6 281 1.7E-45 T 28-03-2018 AL504_RS19155 9fdf941e9d85f218b0b3f1fe8656f603 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 16 278 2.2E-7 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 SMART SM00895 81 206 6.1E-10 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 6.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 6.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 SUPERFAMILY SSF48008 78 212 2.22E-15 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 Pfam PF07729 FCD domain 82 203 5.9E-15 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 SMART SM00345 13 71 3.6E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 Gene3D G3DSA:1.10.10.10 3 74 4.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 SUPERFAMILY SSF46785 5 75 1.07E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 71 4.7E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS16570 4967dfc9a4c6a69ffcd118d061dac333 233 Gene3D G3DSA:1.20.120.530 75 224 7.8E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS30380 6fc583766d7053eeac1d2b2b83e65f67 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.178 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AL504_RS30380 6fc583766d7053eeac1d2b2b83e65f67 60 Gene3D G3DSA:2.20.25.10 8 60 1.4E-19 T 28-03-2018 AL504_RS30380 6fc583766d7053eeac1d2b2b83e65f67 60 Pfam PF03966 Trm112p-like protein 4 41 5.5E-10 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AL504_RS30380 6fc583766d7053eeac1d2b2b83e65f67 60 SUPERFAMILY SSF158997 1 55 1.29E-19 T 28-03-2018 AL504_RS20010 d3b872462a512256099bb9e49c928543 37 Pfam PF00444 Ribosomal protein L36 1 37 8.5E-18 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20010 d3b872462a512256099bb9e49c928543 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 1.0E-9 T 28-03-2018 AL504_RS20010 d3b872462a512256099bb9e49c928543 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20010 d3b872462a512256099bb9e49c928543 37 SUPERFAMILY SSF57840 1 37 1.7E-16 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20010 d3b872462a512256099bb9e49c928543 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.9E-21 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS20010 d3b872462a512256099bb9e49c928543 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.047 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 SMART SM01209 114 293 0.001 T 28-03-2018 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.8E-41 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Pfam PF00364 Biotin-requiring enzyme 604 669 1.2E-18 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Gene3D G3DSA:2.40.50.100 602 671 6.5E-20 T 28-03-2018 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 626 643 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 SUPERFAMILY SSF51230 595 669 1.7E-21 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 SUPERFAMILY SSF56059 83 348 2.65E-70 T 28-03-2018 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 SUPERFAMILY SSF52440 1 113 2.23E-44 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.8E-79 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 SMART SM00878 336 447 1.8E-55 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Pfam PF02785 Biotin carboxylase C-terminal domain 336 448 2.9E-35 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Gene3D G3DSA:3.30.470.20 210 450 6.1E-109 T 28-03-2018 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Gene3D G3DSA:3.30.1490.20 124 209 1.9E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 SUPERFAMILY SSF51246 331 451 8.89E-39 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL504_RS18705 5a9fc8eec7ca73ae13a7566efd52e24f 671 Gene3D G3DSA:3.40.50.20 1 123 2.1E-50 T 28-03-2018 AL504_RS19990 b3330c3bab0b36db9cb2d9739ca9e3ff 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 60 1.0E-24 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19990 b3330c3bab0b36db9cb2d9739ca9e3ff 61 PIRSF PIRSF002211 1 61 4.1E-27 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19990 b3330c3bab0b36db9cb2d9739ca9e3ff 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 60 20.263 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19990 b3330c3bab0b36db9cb2d9739ca9e3ff 61 SUPERFAMILY SSF55129 4 60 1.7E-20 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL504_RS19990 b3330c3bab0b36db9cb2d9739ca9e3ff 61 Pfam PF00327 Ribosomal protein L30p/L7e 6 56 2.6E-18 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL504_RS19990 b3330c3bab0b36db9cb2d9739ca9e3ff 61 Gene3D G3DSA:3.30.1390.20 6 60 8.3E-23 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL504_RS19990 b3330c3bab0b36db9cb2d9739ca9e3ff 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 24 56 - T 28-03-2018 IPR018038 Ribosomal protein L30, conserved site AL504_RS28020 aed6481531ca85de71fc5189cdd98ac0 166 Pfam PF05573 NosL 14 163 2.9E-47 T 28-03-2018 IPR008719 Nitrous oxide reductase accessory protein NosL AL504_RS28020 aed6481531ca85de71fc5189cdd98ac0 166 SUPERFAMILY SSF160387 54 163 4.71E-32 T 28-03-2018 AL504_RS03820 1f707bfabab90eba957afac88172b31c 335 SUPERFAMILY SSF53850 23 253 8.31E-48 T 28-03-2018 AL504_RS03820 1f707bfabab90eba957afac88172b31c 335 Gene3D G3DSA:3.40.190.10 126 261 1.6E-16 T 28-03-2018 AL504_RS03820 1f707bfabab90eba957afac88172b31c 335 Gene3D G3DSA:3.40.190.10 22 125 4.3E-16 T 28-03-2018 AL504_RS03820 1f707bfabab90eba957afac88172b31c 335 SMART SM00062 32 260 1.3E-36 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS03820 1f707bfabab90eba957afac88172b31c 335 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 250 8.9E-30 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS14145 f3d37c2c3bdb179b28f39e31b7d8ac51 373 Gene3D G3DSA:3.40.50.10540 5 370 2.6E-136 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS14145 f3d37c2c3bdb179b28f39e31b7d8ac51 373 Pfam PF02515 CoA-transferase family III 11 368 1.2E-122 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS14145 f3d37c2c3bdb179b28f39e31b7d8ac51 373 SUPERFAMILY SSF89796 9 367 1.57E-126 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS20420 d3bc97ff72e9b5658fc7cb264328a50f 197 Pfam PF02397 Bacterial sugar transferase 3 196 5.1E-56 T 28-03-2018 IPR003362 Bacterial sugar transferase AL504_RS15615 30109b71f0c59f2671ae074ce621bbff 262 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS15615 30109b71f0c59f2671ae074ce621bbff 262 SUPERFAMILY SSF52540 2 249 2.83E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15615 30109b71f0c59f2671ae074ce621bbff 262 Gene3D G3DSA:3.40.50.300 1 262 7.7E-64 T 28-03-2018 AL504_RS15615 30109b71f0c59f2671ae074ce621bbff 262 SMART SM00382 26 225 7.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15615 30109b71f0c59f2671ae074ce621bbff 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 4.6E-11 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS15615 30109b71f0c59f2671ae074ce621bbff 262 Pfam PF00005 ABC transporter 17 178 2.8E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 SUPERFAMILY SSF52540 362 613 1.52E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 ProSitePatterns PS00211 ABC transporters family signature. 515 529 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 Pfam PF00664 ABC transporter transmembrane region 54 312 4.4E-9 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 SMART SM00382 398 589 4.0E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 Pfam PF00005 ABC transporter 392 543 2.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 SUPERFAMILY SSF90123 38 354 2.35E-46 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 Gene3D G3DSA:1.20.1560.10 32 348 1.3E-32 T 28-03-2018 AL504_RS28325 a101ce63d1deb78d9cb75f2219dfbc66 621 Gene3D G3DSA:3.40.50.300 365 616 5.7E-74 T 28-03-2018 AL504_RS07270 1f26a43add80a9b31bb73fc63b58d18d 206 PIRSF PIRSF006324 1 206 2.5E-49 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS07270 1f26a43add80a9b31bb73fc63b58d18d 206 Pfam PF01810 LysE type translocator 10 205 7.6E-35 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS05030 d4324a5e223d5d5d09de3ddc9e065ec7 427 PIRSF PIRSF006066 1 427 3.4E-94 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS05030 d4324a5e223d5d5d09de3ddc9e065ec7 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 2.8E-96 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS05030 d4324a5e223d5d5d09de3ddc9e065ec7 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 2.3E-91 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS19465 142b240f22bb99725dec7478599b57f7 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 445 8.9E-139 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 SMART SM00839 204 446 1.3E-96 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 Gene3D G3DSA:3.40.50.720 209 373 1.2E-44 T 28-03-2018 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 SUPERFAMILY SSF51735 202 448 1.15E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 446 1.5E-87 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 1.9E-49 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 Gene3D G3DSA:3.40.50.10860 62 190 5.0E-54 T 28-03-2018 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 SUPERFAMILY SSF53223 7 196 9.6E-73 T 28-03-2018 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 PIRSF PIRSF000185 22 448 3.7E-115 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 9.9E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 9.9E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 9.9E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 9.9E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 Gene3D G3DSA:1.10.285.10 6 61 5.5E-8 T 28-03-2018 AL504_RS20950 1aa42a5425c5c0013ec8f9dc5aa5ddf7 448 Gene3D G3DSA:1.10.285.10 374 448 5.0E-29 T 28-03-2018 AL504_RS31320 6ad491414f9b45480f83bb915587d5f1 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 320 2.1E-33 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS31320 6ad491414f9b45480f83bb915587d5f1 345 Gene3D G3DSA:1.10.3470.10 3 325 7.5E-34 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS25195 2940b38a4ad4f1b2ad4cb59b94288ed4 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 27.812 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL504_RS25195 2940b38a4ad4f1b2ad4cb59b94288ed4 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.4E-59 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL504_RS25195 2940b38a4ad4f1b2ad4cb59b94288ed4 160 Gene3D G3DSA:3.30.70.860 95 159 8.6E-30 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain AL504_RS25195 2940b38a4ad4f1b2ad4cb59b94288ed4 160 SUPERFAMILY SSF89963 89 160 5.23E-27 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL504_RS25195 2940b38a4ad4f1b2ad4cb59b94288ed4 160 Gene3D G3DSA:3.30.70.990 10 94 2.0E-28 T 28-03-2018 IPR035570 UPF0234 N-terminal domain AL504_RS25195 2940b38a4ad4f1b2ad4cb59b94288ed4 160 SUPERFAMILY SSF89963 2 83 4.71E-28 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL504_RS04955 5549b8f2d19880422f2a066146843964 169 SUPERFAMILY SSF46785 22 148 5.08E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04955 5549b8f2d19880422f2a066146843964 169 Pfam PF13463 Winged helix DNA-binding domain 50 115 7.9E-19 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS04955 5549b8f2d19880422f2a066146843964 169 Gene3D G3DSA:1.10.10.10 13 168 4.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04955 5549b8f2d19880422f2a066146843964 169 PIRSF PIRSF036158 2 169 2.0E-76 T 28-03-2018 IPR014601 Transcriptional regulator with MarR-type HTH domain AL504_RS10600 2ac38273a31679e238b5908986426d01 43 Pfam PF08085 Entericidin EcnA/B family 21 41 2.1E-10 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AL504_RS04125 b20d628588dced1b3886e9098adaaadf 410 SUPERFAMILY SSF53067 15 141 3.63E-9 T 28-03-2018 AL504_RS04125 b20d628588dced1b3886e9098adaaadf 410 Pfam PF12693 GspL periplasmic domain 241 398 4.1E-13 T 28-03-2018 IPR025691 GspL periplasmic domain AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 148 7.2E-37 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 174 325 3.8E-18 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 SUPERFAMILY SSF55347 156 322 6.54E-49 T 28-03-2018 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 SMART SM00859 10 148 1.4E-56 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 Gene3D G3DSA:3.30.360.10 166 322 2.7E-55 T 28-03-2018 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 SUPERFAMILY SSF51735 7 173 3.41E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 9 354 4.0E-127 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 Gene3D G3DSA:3.40.50.720 2 165 4.9E-46 T 28-03-2018 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 9 348 41.49 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS15595 03868abe80ff8897aefa6b618f937aa3 354 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 151 167 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL504_RS23040 18950b52f47ab77f22f39c7a0c1c22c3 313 SUPERFAMILY SSF161098 92 297 2.22E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23040 18950b52f47ab77f22f39c7a0c1c22c3 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 8.4E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23040 18950b52f47ab77f22f39c7a0c1c22c3 313 Gene3D G3DSA:1.10.3720.10 3 301 1.4E-38 T 28-03-2018 AL504_RS02980 e4e40fbb51b80f959c5eda1d02aea8f0 245 Gene3D G3DSA:1.10.3720.10 3 241 7.8E-34 T 28-03-2018 AL504_RS02980 e4e40fbb51b80f959c5eda1d02aea8f0 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 239 7.5E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS02980 e4e40fbb51b80f959c5eda1d02aea8f0 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 30 133 3.1E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS02980 e4e40fbb51b80f959c5eda1d02aea8f0 245 SUPERFAMILY SSF161098 32 224 2.22E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16965 6dba9a7c7afd47aa435035d33a82833f 595 Pfam PF13180 PDZ domain 509 582 3.5E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS16965 6dba9a7c7afd47aa435035d33a82833f 595 Gene3D G3DSA:2.30.42.10 479 588 3.0E-10 T 28-03-2018 AL504_RS16965 6dba9a7c7afd47aa435035d33a82833f 595 SUPERFAMILY SSF55486 248 441 2.49E-8 T 28-03-2018 AL504_RS16965 6dba9a7c7afd47aa435035d33a82833f 595 Pfam PF05299 M61 glycyl aminopeptidase 293 409 2.1E-47 T 28-03-2018 IPR007963 Peptidase M61, catalytic domain AL504_RS16965 6dba9a7c7afd47aa435035d33a82833f 595 Gene3D G3DSA:1.10.390.10 283 478 8.3E-24 T 28-03-2018 AL504_RS16965 6dba9a7c7afd47aa435035d33a82833f 595 PIRSF PIRSF016493 8 593 1.5E-206 T 28-03-2018 IPR024191 Peptidase M61 AL504_RS16965 6dba9a7c7afd47aa435035d33a82833f 595 SUPERFAMILY SSF50156 514 585 1.2E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS14830 e5d9e1afffb3aaaf07ee20f970982654 202 Pfam PF01810 LysE type translocator 17 201 1.7E-19 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 Gene3D G3DSA:3.40.50.970 63 481 2.2E-83 T 28-03-2018 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 SUPERFAMILY SSF52922 715 901 5.65E-59 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 147 302 5.9E-9 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 PIRSF PIRSF000156 4 902 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 Gene3D G3DSA:3.40.50.970 482 717 1.5E-65 T 28-03-2018 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 Gene3D G3DSA:3.40.50.920 718 902 6.2E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 SUPERFAMILY SSF52518 483 711 1.18E-96 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 12 901 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL504_RS06655 61b1b0367f1a341f028a61d95c46a1fa 902 SUPERFAMILY SSF52518 64 477 2.44E-135 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS14565 0878bd82d7671c16dc89a5fbab6b0a67 425 Gene3D G3DSA:1.25.40.120 42 422 2.6E-4 T 28-03-2018 AL504_RS28055 b3ff52e5726b42e7aa1b3afa996faf1f 163 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 52 126 3.3E-33 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL504_RS28055 b3ff52e5726b42e7aa1b3afa996faf1f 163 SUPERFAMILY SSF141734 28 132 2.88E-42 T 28-03-2018 AL504_RS28055 b3ff52e5726b42e7aa1b3afa996faf1f 163 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 26 130 28.761 T 28-03-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL504_RS28055 b3ff52e5726b42e7aa1b3afa996faf1f 163 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 75 126 5.0E-21 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL504_RS04855 c2e0424cca0ca4ec2d3acfb77732a03a 309 Pfam PF08340 Domain of unknown function (DUF1732) 215 309 1.6E-33 T 28-03-2018 IPR013551 Domain of unknown function DUF1732 AL504_RS04855 c2e0424cca0ca4ec2d3acfb77732a03a 309 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.8E-35 T 28-03-2018 IPR013527 YicC-like, N-terminal AL504_RS04855 c2e0424cca0ca4ec2d3acfb77732a03a 309 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 309 1.3E-62 T 28-03-2018 IPR005229 Conserved hypothetical protein CHP00255 AL504_RS29750 29f6571e88affa45e7c2d17cdc2aa885 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 259 2.5E-37 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS29750 29f6571e88affa45e7c2d17cdc2aa885 262 Gene3D G3DSA:3.10.310.10 1 122 8.3E-34 T 28-03-2018 AL504_RS29750 29f6571e88affa45e7c2d17cdc2aa885 262 PIRSF PIRSF016184 1 262 1.6E-60 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS29750 29f6571e88affa45e7c2d17cdc2aa885 262 Gene3D G3DSA:3.10.310.10 123 250 1.9E-36 T 28-03-2018 AL504_RS29750 29f6571e88affa45e7c2d17cdc2aa885 262 SUPERFAMILY SSF54506 4 262 1.7E-83 T 28-03-2018 AL504_RS29750 29f6571e88affa45e7c2d17cdc2aa885 262 Pfam PF02567 Phenazine biosynthesis-like protein 9 256 1.1E-56 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS25905 a388ecd386449fbb1fe2b7b611ce78bd 326 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 290 6.9E-108 T 28-03-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 AL504_RS25905 a388ecd386449fbb1fe2b7b611ce78bd 326 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 277 1.1E-61 T 28-03-2018 AL504_RS25905 a388ecd386449fbb1fe2b7b611ce78bd 326 SUPERFAMILY SSF53850 48 241 3.74E-38 T 28-03-2018 AL504_RS25905 a388ecd386449fbb1fe2b7b611ce78bd 326 Gene3D G3DSA:3.40.190.10 127 275 7.6E-23 T 28-03-2018 AL504_RS25905 a388ecd386449fbb1fe2b7b611ce78bd 326 Gene3D G3DSA:3.40.190.10 20 126 1.7E-7 T 28-03-2018 AL504_RS25905 a388ecd386449fbb1fe2b7b611ce78bd 326 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 6 250 4.4E-76 T 28-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 SUPERFAMILY SSF51735 4 227 2.04E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 Pfam PF00106 short chain dehydrogenase 6 189 8.1E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 Gene3D G3DSA:3.40.50.720 2 268 4.9E-53 T 28-03-2018 AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 188 0.0013 T 28-03-2018 AL504_RS24920 289ed14790fb814c23a6ad15d6ac43c7 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS23390 d27cc810da15ec70e94d9028a04246ce 274 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 273 5.4E-88 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AL504_RS23390 d27cc810da15ec70e94d9028a04246ce 274 SUPERFAMILY SSF161098 77 264 4.84E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23390 d27cc810da15ec70e94d9028a04246ce 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 264 4.1E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23390 d27cc810da15ec70e94d9028a04246ce 274 Gene3D G3DSA:1.10.3720.10 25 273 4.9E-24 T 28-03-2018 AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 533 1.6E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 202 213 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 Gene3D G3DSA:2.30.38.10 363 441 1.2E-12 T 28-03-2018 AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 Gene3D G3DSA:3.40.50.980 28 181 2.3E-28 T 28-03-2018 AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 Gene3D G3DSA:3.30.300.30 442 554 8.8E-23 T 28-03-2018 AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 Pfam PF00501 AMP-binding enzyme 38 446 9.8E-56 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 SUPERFAMILY SSF56801 25 546 5.23E-106 T 28-03-2018 AL504_RS16335 4e1c2c871bc05bd1ba8c35cafc68c56d 559 Gene3D G3DSA:3.40.50.980 196 361 2.0E-23 T 28-03-2018 AL504_RS07045 07c715ed3704fbf3c3480a5ea0064465 329 PIRSF PIRSF005739 12 324 2.1E-13 T 28-03-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 AL504_RS07045 07c715ed3704fbf3c3480a5ea0064465 329 Gene3D G3DSA:3.40.50.150 86 325 7.0E-33 T 28-03-2018 AL504_RS07045 07c715ed3704fbf3c3480a5ea0064465 329 Pfam PF16864 Dimerisation domain 9 88 7.1E-11 T 28-03-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain AL504_RS07045 07c715ed3704fbf3c3480a5ea0064465 329 Gene3D G3DSA:1.10.10.10 5 85 1.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07045 07c715ed3704fbf3c3480a5ea0064465 329 Pfam PF00891 O-methyltransferase 103 310 2.1E-24 T 28-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 AL504_RS07045 07c715ed3704fbf3c3480a5ea0064465 329 SUPERFAMILY SSF53335 103 314 5.73E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS07045 07c715ed3704fbf3c3480a5ea0064465 329 SUPERFAMILY SSF46785 6 85 2.27E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 86 99 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 112 120 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 403 416 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 137 152 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 290 304 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 347 358 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 213 226 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 199 212 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 PRINTS PR00415 Aconitase family signature 123 136 2.3E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 469 3.4E-189 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 Pfam PF00330 Aconitase family (aconitate hydratase) 9 461 1.3E-140 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 Gene3D G3DSA:3.30.499.10 300 473 8.0E-52 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 ProSitePatterns PS01244 Aconitase family signature 2. 403 416 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 Gene3D G3DSA:3.40.1060.10 159 292 2.1E-36 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 ProSitePatterns PS00450 Aconitase family signature 1. 343 359 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 SUPERFAMILY SSF53732 3 472 4.05E-153 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 470 51.959 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL504_RS20645 b4ffdf09d3a78a0c106ed91bf6598d47 473 Gene3D G3DSA:3.30.499.10 1 158 1.9E-34 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS00990 427fa603b3041ff473af1fff2e64fb1b 344 SMART SM00382 62 254 1.3E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS00990 427fa603b3041ff473af1fff2e64fb1b 344 Pfam PF00005 ABC transporter 54 204 2.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS00990 427fa603b3041ff473af1fff2e64fb1b 344 SUPERFAMILY SSF52540 62 338 4.9E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00990 427fa603b3041ff473af1fff2e64fb1b 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 254 340 3.9E-29 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS00990 427fa603b3041ff473af1fff2e64fb1b 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 256 320 1.2E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS00990 427fa603b3041ff473af1fff2e64fb1b 344 Gene3D G3DSA:3.40.50.300 13 344 4.5E-78 T 28-03-2018 AL504_RS00990 427fa603b3041ff473af1fff2e64fb1b 344 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS22115 11bfceb128874a3f09b8381d36582c3c 182 Gene3D G3DSA:2.60.120.480 5 168 9.6E-23 T 28-03-2018 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AL504_RS22115 11bfceb128874a3f09b8381d36582c3c 182 SUPERFAMILY SSF51182 6 159 3.95E-26 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS22115 11bfceb128874a3f09b8381d36582c3c 182 Pfam PF04115 Ureidoglycolate lyase 57 134 5.6E-13 T 28-03-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 371 1.0E-110 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 481 503 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 434 457 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 270 285 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 343 363 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 517 540 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 235 253 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR00701 60kDa inner membrane protein signature 181 201 9.0E-65 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 Pfam PF14849 YidC periplasmic domain 88 362 2.8E-84 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 553 24.45 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 372 551 1.1E-67 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR01900 YidC translocation/secretion protein signature 487 502 5.3E-21 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR01900 YidC translocation/secretion protein signature 506 530 5.3E-21 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 PRINTS PR01900 YidC translocation/secretion protein signature 358 374 5.3E-21 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS19365 d562d693f2c0b2e8f22afa9e056b2cfe 563 Pfam PF02096 60Kd inner membrane protein 373 550 5.7E-57 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL504_RS29240 14c4c2af664dd1da75b30cc4278289cc 458 Gene3D G3DSA:3.40.605.10 1 245 7.8E-66 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS29240 14c4c2af664dd1da75b30cc4278289cc 458 Gene3D G3DSA:3.40.309.10 246 438 8.9E-66 T 28-03-2018 AL504_RS29240 14c4c2af664dd1da75b30cc4278289cc 458 Pfam PF00171 Aldehyde dehydrogenase family 3 451 2.0E-128 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS29240 14c4c2af664dd1da75b30cc4278289cc 458 SUPERFAMILY SSF53720 3 454 1.44E-134 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS07400 2301a671853179fdc35c819b116cc1ac 383 Gene3D G3DSA:3.40.50.10540 5 380 5.1E-122 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS07400 2301a671853179fdc35c819b116cc1ac 383 Pfam PF02515 CoA-transferase family III 11 376 1.2E-113 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS07400 2301a671853179fdc35c819b116cc1ac 383 SUPERFAMILY SSF89796 9 377 2.49E-118 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS03365 c48e6be9fffd3e3d4abe96c8492b09af 151 TIGRFAM TIGR02695 azurin: azurin 25 149 8.7E-45 T 28-03-2018 IPR014068 Azurin AL504_RS03365 c48e6be9fffd3e3d4abe96c8492b09af 151 SUPERFAMILY SSF49503 25 150 1.66E-33 T 28-03-2018 IPR008972 Cupredoxin AL504_RS03365 c48e6be9fffd3e3d4abe96c8492b09af 151 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 143 - T 28-03-2018 IPR028871 Blue (type 1) copper protein, binding site AL504_RS03365 c48e6be9fffd3e3d4abe96c8492b09af 151 Gene3D G3DSA:2.60.40.420 23 150 5.7E-8 T 28-03-2018 IPR008972 Cupredoxin AL504_RS03365 c48e6be9fffd3e3d4abe96c8492b09af 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 29 147 2.0E-30 T 28-03-2018 AL504_RS03365 c48e6be9fffd3e3d4abe96c8492b09af 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 25 149 1.3E-18 T 28-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AL504_RS16440 a9eddbf3b0c1fcde153b95d61496d7ab 443 SUPERFAMILY SSF56954 28 439 1.96E-82 T 28-03-2018 AL504_RS16440 a9eddbf3b0c1fcde153b95d61496d7ab 443 Gene3D G3DSA:1.20.1600.10 23 432 5.8E-64 T 28-03-2018 AL504_RS16440 a9eddbf3b0c1fcde153b95d61496d7ab 443 Pfam PF02321 Outer membrane efflux protein 240 423 1.0E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS16440 a9eddbf3b0c1fcde153b95d61496d7ab 443 Pfam PF02321 Outer membrane efflux protein 28 215 9.3E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS16440 a9eddbf3b0c1fcde153b95d61496d7ab 443 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 25 439 4.0E-90 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL504_RS17405 3dae44fb4531de8f6987e264800f0ff5 116 Gene3D G3DSA:3.10.20.30 1 113 1.0E-22 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS17405 3dae44fb4531de8f6987e264800f0ff5 116 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 87 8.9E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS17405 3dae44fb4531de8f6987e264800f0ff5 116 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL504_RS17405 3dae44fb4531de8f6987e264800f0ff5 116 SUPERFAMILY SSF54292 1 95 3.8E-21 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS02065 e28658640d593770c36921ee46e98825 290 Pfam PF04909 Amidohydrolase 24 288 3.9E-34 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS02065 e28658640d593770c36921ee46e98825 290 Gene3D G3DSA:3.20.20.140 5 290 3.0E-38 T 28-03-2018 AL504_RS02065 e28658640d593770c36921ee46e98825 290 SUPERFAMILY SSF51556 18 289 2.27E-66 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS15470 64ee84b842c692c822ab14fc0914196b 301 SUPERFAMILY SSF53850 94 298 2.9E-39 T 28-03-2018 AL504_RS15470 64ee84b842c692c822ab14fc0914196b 301 SUPERFAMILY SSF46785 5 114 5.99E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15470 64ee84b842c692c822ab14fc0914196b 301 Gene3D G3DSA:3.40.190.10 95 180 2.6E-22 T 28-03-2018 AL504_RS15470 64ee84b842c692c822ab14fc0914196b 301 Gene3D G3DSA:3.40.190.10 181 267 3.8E-16 T 28-03-2018 AL504_RS15470 64ee84b842c692c822ab14fc0914196b 301 Pfam PF03466 LysR substrate binding domain 92 294 8.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS15470 64ee84b842c692c822ab14fc0914196b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.8E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15470 64ee84b842c692c822ab14fc0914196b 301 Gene3D G3DSA:1.10.10.10 5 94 5.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18420 2a994d4e05d9e176be47455f7d58d993 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 210 230 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL504_RS18420 2a994d4e05d9e176be47455f7d58d993 401 SUPERFAMILY SSF53383 10 398 8.78E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS18420 2a994d4e05d9e176be47455f7d58d993 401 Gene3D G3DSA:3.40.640.10 32 276 6.5E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS18420 2a994d4e05d9e176be47455f7d58d993 401 Pfam PF00266 Aminotransferase class-V 28 389 8.0E-53 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS18420 2a994d4e05d9e176be47455f7d58d993 401 Gene3D G3DSA:3.90.1150.10 277 396 1.3E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS13895 54ea860e701bc85f7b24f9c9905b92c9 741 Gene3D G3DSA:3.40.50.970 406 609 4.3E-17 T 28-03-2018 AL504_RS13895 54ea860e701bc85f7b24f9c9905b92c9 741 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 463 607 2.9E-18 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS13895 54ea860e701bc85f7b24f9c9905b92c9 741 Gene3D G3DSA:3.40.50.970 22 191 2.3E-16 T 28-03-2018 AL504_RS13895 54ea860e701bc85f7b24f9c9905b92c9 741 SUPERFAMILY SSF52518 407 656 2.95E-31 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS13895 54ea860e701bc85f7b24f9c9905b92c9 741 SUPERFAMILY SSF52518 21 208 2.9E-26 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS13895 54ea860e701bc85f7b24f9c9905b92c9 741 Gene3D G3DSA:3.30.70.20 610 700 3.2E-5 T 28-03-2018 AL504_RS10080 08618b32c19d7f166ad59d4a2a51c5f9 271 Pfam PF04909 Amidohydrolase 6 270 1.1E-44 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS10080 08618b32c19d7f166ad59d4a2a51c5f9 271 SUPERFAMILY SSF51556 1 270 3.26E-77 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS10080 08618b32c19d7f166ad59d4a2a51c5f9 271 Gene3D G3DSA:3.20.20.140 1 270 6.1E-40 T 28-03-2018 AL504_RS15310 2c00dde7d14d7075afe97ae7d03b82af 132 Pfam PF05932 Tir chaperone protein (CesT) family 8 124 1.3E-6 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL504_RS15310 2c00dde7d14d7075afe97ae7d03b82af 132 SUPERFAMILY SSF69635 6 126 2.0E-9 T 28-03-2018 AL504_RS15310 2c00dde7d14d7075afe97ae7d03b82af 132 Gene3D G3DSA:3.30.1460.10 5 132 4.8E-19 T 28-03-2018 AL504_RS06695 f9a29c3c487d9de08a6d0c0777936e0f 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 472 4.8E-135 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS06695 f9a29c3c487d9de08a6d0c0777936e0f 496 Gene3D G3DSA:1.20.1600.10 20 478 2.1E-109 T 28-03-2018 AL504_RS06695 f9a29c3c487d9de08a6d0c0777936e0f 496 Pfam PF02321 Outer membrane efflux protein 67 257 6.0E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS06695 f9a29c3c487d9de08a6d0c0777936e0f 496 Pfam PF02321 Outer membrane efflux protein 288 470 1.0E-30 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS06695 f9a29c3c487d9de08a6d0c0777936e0f 496 SUPERFAMILY SSF56954 2 32 1.57E-118 T 28-03-2018 AL504_RS06695 f9a29c3c487d9de08a6d0c0777936e0f 496 SUPERFAMILY SSF56954 58 475 1.57E-118 T 28-03-2018 AL504_RS14235 83e3925c725c0f626ba965246d2d92e2 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 8 135 3.0E-34 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL504_RS14235 83e3925c725c0f626ba965246d2d92e2 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 135 4.9E-39 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL504_RS14235 83e3925c725c0f626ba965246d2d92e2 160 SUPERFAMILY SSF55083 6 148 3.01E-47 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL504_RS14235 83e3925c725c0f626ba965246d2d92e2 160 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL504_RS14235 83e3925c725c0f626ba965246d2d92e2 160 Gene3D G3DSA:3.30.70.560 4 159 1.1E-49 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL504_RS15235 a78b2336eaaef62c5619626787511a8f 132 Pfam PF02566 OsmC-like protein 32 124 5.7E-16 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS15235 a78b2336eaaef62c5619626787511a8f 132 Gene3D G3DSA:3.30.300.20 1 129 2.5E-24 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS15235 a78b2336eaaef62c5619626787511a8f 132 SUPERFAMILY SSF82784 8 121 1.44E-27 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 SUPERFAMILY SSF46689 243 294 1.79E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 Pfam PF02311 AraC-like ligand binding domain 31 149 1.0E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 Gene3D G3DSA:1.10.10.60 244 306 1.5E-16 T 28-03-2018 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 Gene3D G3DSA:1.10.10.60 182 243 5.7E-12 T 28-03-2018 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 SUPERFAMILY SSF51215 31 168 1.44E-8 T 28-03-2018 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 SUPERFAMILY SSF46689 192 238 4.21E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 Pfam PF12833 Helix-turn-helix domain 214 292 2.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 SMART SM00342 207 290 1.8E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 6.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 6.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS27515 b95b2630c4ae529cb96048d58cc0fb11 307 Gene3D G3DSA:2.60.120.280 10 176 1.5E-14 T 28-03-2018 AL504_RS20245 997a5c37b4a1e5ced90938f467ae76bf 220 Pfam PF04367 Protein of unknown function (DUF502) 56 161 3.8E-37 T 28-03-2018 IPR007462 Protein of unknown function DUF502 AL504_RS00920 cb5fefab346882b0fe8ee327a7675472 291 SUPERFAMILY SSF52047 65 270 4.08E-13 T 28-03-2018 AL504_RS00920 cb5fefab346882b0fe8ee327a7675472 291 Gene3D G3DSA:3.80.10.10 140 283 7.3E-14 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL504_RS00920 cb5fefab346882b0fe8ee327a7675472 291 Gene3D G3DSA:3.80.10.10 35 139 4.6E-5 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 Gene3D G3DSA:3.20.20.70 24 364 7.6E-76 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 Pfam PF06463 Molybdenum Cofactor Synthesis C 218 343 5.1E-35 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 28 364 1.0E-110 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 27 364 39.302 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 42 53 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 SUPERFAMILY SSF102114 28 309 6.02E-72 T 28-03-2018 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 SMART SM00729 36 249 1.6E-9 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 Pfam PF13394 4Fe-4S single cluster domain 43 134 8.8E-8 T 28-03-2018 AL504_RS25450 988ef40789e10733cdd459baa1bd05a3 364 Pfam PF04055 Radical SAM superfamily 40 209 1.7E-28 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS04380 318e7fe34df6ac6fc8eaa684aeec1f32 400 SUPERFAMILY SSF103473 11 391 5.36E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS04380 318e7fe34df6ac6fc8eaa684aeec1f32 400 Pfam PF07690 Major Facilitator Superfamily 13 281 1.2E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS04380 318e7fe34df6ac6fc8eaa684aeec1f32 400 Gene3D G3DSA:1.20.1250.20 202 394 7.7E-10 T 28-03-2018 AL504_RS04380 318e7fe34df6ac6fc8eaa684aeec1f32 400 Gene3D G3DSA:1.20.1250.20 6 201 3.6E-17 T 28-03-2018 AL504_RS26670 81783eaf48b6afb438eb19dacac016c3 236 SUPERFAMILY SSF47616 106 221 2.46E-20 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS26670 81783eaf48b6afb438eb19dacac016c3 236 Gene3D G3DSA:3.40.30.10 1 101 9.5E-18 T 28-03-2018 AL504_RS26670 81783eaf48b6afb438eb19dacac016c3 236 SUPERFAMILY SSF52833 1 84 2.5E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS26670 81783eaf48b6afb438eb19dacac016c3 236 Pfam PF14497 Glutathione S-transferase, C-terminal domain 110 216 3.0E-27 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS26670 81783eaf48b6afb438eb19dacac016c3 236 Gene3D G3DSA:1.20.1050.10 102 206 2.8E-23 T 28-03-2018 AL504_RS29640 6e43bd534f42794679005bfeb319af3e 348 Pfam PF13280 WYL domain 162 344 2.3E-23 T 28-03-2018 IPR026881 WYL domain AL504_RS23190 6ab47c1170a94f19d3bfc5ec34d24722 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 308 4.1E-93 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS23190 6ab47c1170a94f19d3bfc5ec34d24722 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 284 3.6E-73 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS23190 6ab47c1170a94f19d3bfc5ec34d24722 325 SUPERFAMILY SSF53850 141 254 2.35E-5 T 28-03-2018 AL504_RS23190 6ab47c1170a94f19d3bfc5ec34d24722 325 Gene3D G3DSA:3.40.190.10 142 234 4.9E-6 T 28-03-2018 AL504_RS23190 6ab47c1170a94f19d3bfc5ec34d24722 325 PIRSF PIRSF006470 2 325 3.4E-98 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS29285 2651310fee27782e5a847b215c4cfe87 318 SUPERFAMILY SSF53850 109 279 1.01E-13 T 28-03-2018 AL504_RS29285 2651310fee27782e5a847b215c4cfe87 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 42 313 3.4E-84 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29285 2651310fee27782e5a847b215c4cfe87 318 Gene3D G3DSA:3.40.190.10 118 230 2.7E-12 T 28-03-2018 AL504_RS29285 2651310fee27782e5a847b215c4cfe87 318 PIRSF PIRSF017082 1 318 1.7E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS28895 8cd6264a741d346c6f7fd3e842fd6c8c 399 Pfam PF00144 Beta-lactamase 113 395 2.4E-24 T 28-03-2018 IPR001466 Beta-lactamase-related AL504_RS28895 8cd6264a741d346c6f7fd3e842fd6c8c 399 Gene3D G3DSA:3.40.710.10 102 399 1.9E-45 T 28-03-2018 AL504_RS28895 8cd6264a741d346c6f7fd3e842fd6c8c 399 SUPERFAMILY SSF56601 53 388 5.63E-69 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS13315 1f12d820b80bc2598c0eca1e8e470a56 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 2.4E-11 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AL504_RS13315 1f12d820b80bc2598c0eca1e8e470a56 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 3.1E-10 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AL504_RS07245 b727d44870ff94801b6a5c7c7a26e894 390 Gene3D G3DSA:3.40.47.10 5 221 4.0E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS07245 b727d44870ff94801b6a5c7c7a26e894 390 Gene3D G3DSA:3.40.47.10 222 386 5.2E-22 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS07245 b727d44870ff94801b6a5c7c7a26e894 390 Pfam PF00108 Thiolase, N-terminal domain 6 184 4.3E-20 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS07245 b727d44870ff94801b6a5c7c7a26e894 390 SUPERFAMILY SSF53901 16 121 3.7E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS07245 b727d44870ff94801b6a5c7c7a26e894 390 SUPERFAMILY SSF53901 188 359 3.7E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS07245 b727d44870ff94801b6a5c7c7a26e894 390 PIRSF PIRSF000429 1 388 6.9E-66 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS07245 b727d44870ff94801b6a5c7c7a26e894 390 Pfam PF02803 Thiolase, C-terminal domain 262 365 1.8E-9 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS03055 01f5b3a02c5b8efb623a0157d98f456d 171 SUPERFAMILY SSF88946 10 99 2.94E-16 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03055 01f5b3a02c5b8efb623a0157d98f456d 171 Gene3D G3DSA:1.10.10.10 81 163 9.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03055 01f5b3a02c5b8efb623a0157d98f456d 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 161 2.6E-22 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03055 01f5b3a02c5b8efb623a0157d98f456d 171 SUPERFAMILY SSF88659 91 163 1.59E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03055 01f5b3a02c5b8efb623a0157d98f456d 171 Gene3D G3DSA:1.10.1740.10 7 80 2.5E-16 T 28-03-2018 AL504_RS03055 01f5b3a02c5b8efb623a0157d98f456d 171 Pfam PF04542 Sigma-70 region 2 15 80 1.1E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03055 01f5b3a02c5b8efb623a0157d98f456d 171 Pfam PF08281 Sigma-70, region 4 111 163 1.2E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18040 fc7faefccdc7022efc8124d8ae213757 210 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 2.7E-20 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL504_RS18040 fc7faefccdc7022efc8124d8ae213757 210 Pfam PF02416 mttA/Hcf106 family 4 50 5.9E-9 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL504_RS18040 fc7faefccdc7022efc8124d8ae213757 210 Gene3D G3DSA:1.10.287.1060 23 105 9.6E-4 T 28-03-2018 AL504_RS18040 fc7faefccdc7022efc8124d8ae213757 210 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.7E-15 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL504_RS18040 fc7faefccdc7022efc8124d8ae213757 210 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.7E-15 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL504_RS18040 fc7faefccdc7022efc8124d8ae213757 210 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.7E-15 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL504_RS18040 fc7faefccdc7022efc8124d8ae213757 210 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 195 17.643 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 SUPERFAMILY SSF52172 8 136 1.05E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 SMART SM00448 10 124 4.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 Gene3D G3DSA:3.40.50.2300 9 153 7.4E-30 T 28-03-2018 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 SMART SM00421 147 204 2.9E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 Gene3D G3DSA:1.10.10.10 154 212 2.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.8E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.8E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.8E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 SUPERFAMILY SSF46894 139 209 9.86E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 3.0E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS22090 2275c7e4f94bd14bd6540d032569e9aa 212 Pfam PF00072 Response regulator receiver domain 12 125 1.2E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28190 7d0f2500021a18af043a4fb4f955005d 347 SMART SM00450 1 129 3.1E-10 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS28190 7d0f2500021a18af043a4fb4f955005d 347 Gene3D G3DSA:3.40.50.300 138 344 3.3E-10 T 28-03-2018 AL504_RS28190 7d0f2500021a18af043a4fb4f955005d 347 Pfam PF00581 Rhodanese-like domain 11 125 7.6E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS28190 7d0f2500021a18af043a4fb4f955005d 347 SUPERFAMILY SSF52821 17 129 6.16E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS28190 7d0f2500021a18af043a4fb4f955005d 347 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 319 9.4E-106 T 28-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AL504_RS28190 7d0f2500021a18af043a4fb4f955005d 347 SUPERFAMILY SSF52540 139 273 5.15E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28190 7d0f2500021a18af043a4fb4f955005d 347 Gene3D G3DSA:3.40.250.10 8 135 1.1E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS12865 311939c45564ce17e89817485581e328 176 Pfam PF14081 Domain of unknown function (DUF4262) 28 151 1.6E-35 T 28-03-2018 IPR025358 Protein of unknown function DUF4262 AL504_RS18015 b669c06e2e66901c4020124b9eede7c3 272 Gene3D G3DSA:3.20.20.70 20 267 1.0E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS18015 b669c06e2e66901c4020124b9eede7c3 272 SUPERFAMILY SSF51366 18 271 2.67E-83 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS18015 b669c06e2e66901c4020124b9eede7c3 272 Pfam PF00977 Histidine biosynthesis protein 21 254 1.3E-89 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AL504_RS18015 b669c06e2e66901c4020124b9eede7c3 272 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 17 271 48.504 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL504_RS18015 b669c06e2e66901c4020124b9eede7c3 272 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 18 271 7.3E-113 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL504_RS21230 2963cf3d6578c6ab60f8f652b811137b 413 Pfam PF00155 Aminotransferase class I and II 61 394 1.8E-38 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS21230 2963cf3d6578c6ab60f8f652b811137b 413 Gene3D G3DSA:3.90.1150.10 300 402 1.2E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS21230 2963cf3d6578c6ab60f8f652b811137b 413 Gene3D G3DSA:3.40.640.10 52 299 5.7E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS21230 2963cf3d6578c6ab60f8f652b811137b 413 SUPERFAMILY SSF53383 12 399 9.35E-91 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 Pfam PF03466 LysR substrate binding domain 88 292 1.4E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 Gene3D G3DSA:1.10.10.10 1 90 1.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 Gene3D G3DSA:3.40.190.10 91 177 7.3E-16 T 28-03-2018 AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 SUPERFAMILY SSF53850 90 297 5.58E-26 T 28-03-2018 AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 SUPERFAMILY SSF46785 1 85 1.53E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01015 7c312a7430652611122fcb586f88cf26 327 Gene3D G3DSA:3.40.190.10 178 264 1.1E-14 T 28-03-2018 AL504_RS19125 3f9adac8823a9337c3bfe1824dcb6f44 128 SUPERFAMILY SSF55298 10 116 7.7E-27 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS19125 3f9adac8823a9337c3bfe1824dcb6f44 128 Pfam PF01042 Endoribonuclease L-PSP 10 115 1.1E-18 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS19125 3f9adac8823a9337c3bfe1824dcb6f44 128 Gene3D G3DSA:3.30.1330.40 3 119 5.7E-22 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 Gene3D G3DSA:3.50.50.60 361 428 8.6E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 Gene3D G3DSA:3.30.9.10 253 360 2.1E-24 T 28-03-2018 AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 Pfam PF01266 FAD dependent oxidoreductase 19 408 9.6E-54 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 SUPERFAMILY SSF51905 122 283 2.59E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 SUPERFAMILY SSF51905 370 427 2.59E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 SUPERFAMILY SSF51905 19 69 2.59E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 SUPERFAMILY SSF54373 285 370 2.88E-14 T 28-03-2018 AL504_RS19115 f0495d042208c12b6db8ea3e0247ff11 428 Gene3D G3DSA:3.50.50.60 5 252 5.6E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19110 8956026d90f3cb7d5f13d8f379d33db1 333 SUPERFAMILY SSF53850 121 289 1.3E-8 T 28-03-2018 AL504_RS19110 8956026d90f3cb7d5f13d8f379d33db1 333 Gene3D G3DSA:3.40.190.10 132 262 7.3E-11 T 28-03-2018 AL504_RS19110 8956026d90f3cb7d5f13d8f379d33db1 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 328 7.4E-62 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19110 8956026d90f3cb7d5f13d8f379d33db1 333 PIRSF PIRSF017082 1 329 7.5E-69 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 SUPERFAMILY SSF47203 227 371 5.96E-35 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 Gene3D G3DSA:1.10.540.10 1 117 9.9E-19 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 SUPERFAMILY SSF56645 1 223 6.02E-49 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 1.2E-13 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 Gene3D G3DSA:2.40.110.10 118 224 2.2E-25 T 28-03-2018 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 Gene3D G3DSA:1.20.140.10 227 360 8.4E-32 T 28-03-2018 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 213 3.8E-18 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS01715 29d39d2298f6a805e68653ed354c9cd7 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 353 4.9E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 Pfam PF00814 Glycoprotease family 37 134 1.4E-25 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 Gene3D G3DSA:3.30.420.40 1 141 6.1E-36 T 28-03-2018 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 238 8.2E-58 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 SUPERFAMILY SSF53067 5 107 4.86E-22 T 28-03-2018 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 SUPERFAMILY SSF55729 268 411 7.38E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 SUPERFAMILY SSF53067 114 236 1.09E-14 T 28-03-2018 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 Pfam PF00583 Acetyltransferase (GNAT) family 300 383 3.4E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 Gene3D G3DSA:3.40.630.30 268 421 9.8E-33 T 28-03-2018 AL504_RS12435 0682adf62c46f34a2c929adcc84f5e13 423 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 274 406 1.8E-29 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AL504_RS01595 3a2a0d62281b84806a9a03eef016c164 214 SUPERFAMILY SSF53448 5 195 4.55E-21 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS01595 3a2a0d62281b84806a9a03eef016c164 214 Pfam PF12804 MobA-like NTP transferase domain 7 171 4.6E-22 T 28-03-2018 IPR025877 MobA-like NTP transferase AL504_RS01595 3a2a0d62281b84806a9a03eef016c164 214 Gene3D G3DSA:3.90.550.10 2 205 2.3E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 4.1E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 4.1E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 512 4.1E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 SUPERFAMILY SSF55874 373 514 4.19E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 Gene3D G3DSA:3.30.565.10 346 514 1.0E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 SMART SM00304 253 304 2.9E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 SUPERFAMILY SSF47384 288 359 2.55E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 513 7.2E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 Pfam PF00672 HAMP domain 253 300 4.3E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 Gene3D G3DSA:1.10.287.130 295 345 6.3E-5 T 28-03-2018 AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 SMART SM00387 406 515 2.6E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS13760 c99b95b7b59a40548c31f01574e269dd 517 SUPERFAMILY SSF158472 253 301 2.35E-5 T 28-03-2018 AL504_RS05670 15537a957895081a5231fe26e40b3c37 296 SUPERFAMILY SSF51430 15 286 1.44E-62 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS05670 15537a957895081a5231fe26e40b3c37 296 Gene3D G3DSA:3.20.20.100 12 292 5.7E-62 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS05670 15537a957895081a5231fe26e40b3c37 296 Pfam PF00248 Aldo/keto reductase family 19 286 6.9E-47 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 Gene3D G3DSA:1.25.40.20 1 93 4.8E-25 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 SUPERFAMILY SSF48403 8 161 4.71E-36 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 SMART SM00248 69 98 0.004 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 SMART SM00248 36 65 0.13 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 SMART SM00248 135 164 180.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 SMART SM00248 102 131 0.057 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 Pfam PF12796 Ankyrin repeats (3 copies) 9 98 2.0E-13 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 Pfam PF12796 Ankyrin repeats (3 copies) 101 162 7.4E-9 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 Gene3D G3DSA:1.25.40.20 94 167 3.0E-21 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 PRINTS PR01415 Ankyrin repeat signature 85 99 3.9E-5 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS08275 233ae3684ec82ef649fbe804f56a885c 167 PRINTS PR01415 Ankyrin repeat signature 37 52 3.9E-5 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS24195 cdfd89f5bd539d888963a881ff5cb62e 340 PIRSF PIRSF018266 9 340 1.2E-79 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS24195 cdfd89f5bd539d888963a881ff5cb62e 340 Pfam PF16220 Domain of unknown function (DUF4880) 17 58 9.0E-12 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS24195 cdfd89f5bd539d888963a881ff5cb62e 340 Pfam PF04773 FecR protein 130 222 6.0E-20 T 28-03-2018 IPR006860 FecR protein AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 TIGRFAM TIGR03457 sulphoacet_xsc: sulfoacetaldehyde acetyltransferase 6 581 1.3E-280 T 28-03-2018 IPR017820 Sulphoacetaldehyde acetyltransferase GO:0000287|GO:0005737|GO:0019529|GO:0030976|GO:0050487 KEGG: 00430+2.3.3.15|MetaCyc: PWY-1281|MetaCyc: PWY-6637 AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 172 1.4E-48 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 SUPERFAMILY SSF52467 182 366 7.82E-42 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 329 6.1E-32 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 SUPERFAMILY SSF52518 3 182 2.95E-49 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 Gene3D G3DSA:3.40.50.970 1 187 5.6E-51 T 28-03-2018 AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 Gene3D G3DSA:3.40.50.970 359 570 1.9E-39 T 28-03-2018 AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 Gene3D G3DSA:3.40.50.1220 188 358 1.4E-42 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 SUPERFAMILY SSF52518 383 583 4.76E-51 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS02415 431a4736d69b95b03abe3fe91427af8a 603 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 406 554 1.3E-35 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 SMART SM00422 3 72 2.8E-30 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 SUPERFAMILY SSF46955 3 111 1.32E-27 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.2E-9 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.2E-9 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.2E-9 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 Gene3D G3DSA:1.10.1660.10 1 58 3.5E-21 T 28-03-2018 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 Pfam PF13411 MerR HTH family regulatory protein 4 70 6.4E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 Gene3D G3DSA:1.10.1660.10 59 131 1.5E-10 T 28-03-2018 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 Pfam PF07739 TipAS antibiotic-recognition domain 150 214 1.4E-7 T 28-03-2018 IPR012925 TipAS antibiotic-recognition domain AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 Gene3D G3DSA:1.10.490.50 148 232 2.5E-9 T 28-03-2018 AL504_RS08435 f81d20ea02efa2330db05dbeef135f67 338 Gene3D G3DSA:1.10.490.50 255 336 1.2E-6 T 28-03-2018 AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 SMART SM00419 161 209 1.2E-4 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 Pfam PF13545 Crp-like helix-turn-helix domain 153 215 1.5E-13 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 SUPERFAMILY SSF46785 154 219 3.36E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 Pfam PF00027 Cyclic nucleotide-binding domain 26 112 9.2E-15 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 Gene3D G3DSA:2.60.120.10 1 132 1.2E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 Gene3D G3DSA:1.10.10.10 133 227 2.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 SMART SM00100 7 128 2.1E-5 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS22525 0c40b5be775151eeb33fe06c254ebede 232 SUPERFAMILY SSF51206 5 133 2.88E-25 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS16430 4149dc52c33d5384b2038792319e2e65 280 Gene3D G3DSA:3.40.1190.20 1 280 1.2E-65 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS16430 4149dc52c33d5384b2038792319e2e65 280 Pfam PF08543 Phosphomethylpyrimidine kinase 23 274 2.0E-91 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL504_RS16430 4149dc52c33d5384b2038792319e2e65 280 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 16 276 5.9E-93 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS16430 4149dc52c33d5384b2038792319e2e65 280 SUPERFAMILY SSF53613 13 279 1.71E-78 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS17290 595e2af008736bbde07ef111ab8a85f0 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 55 220 6.4E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS17290 595e2af008736bbde07ef111ab8a85f0 220 Gene3D G3DSA:1.10.3720.10 6 220 6.9E-29 T 28-03-2018 AL504_RS17290 595e2af008736bbde07ef111ab8a85f0 220 SUPERFAMILY SSF161098 12 205 2.62E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15195 01122f84a959791b2d34f8fdc9a78eae 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 4.8E-87 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS15195 01122f84a959791b2d34f8fdc9a78eae 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 178 5.6E-57 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS15195 01122f84a959791b2d34f8fdc9a78eae 240 Gene3D G3DSA:3.30.420.10 2 176 1.8E-36 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS15195 01122f84a959791b2d34f8fdc9a78eae 240 SUPERFAMILY SSF53098 1 174 4.47E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS15195 01122f84a959791b2d34f8fdc9a78eae 240 SMART SM00479 2 174 2.7E-44 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL504_RS15195 01122f84a959791b2d34f8fdc9a78eae 240 Pfam PF00929 Exonuclease 4 164 2.4E-33 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL504_RS29560 b28a1de923f56230abbebbdec0a9e36f 345 Gene3D G3DSA:3.30.460.20 3 154 6.4E-17 T 28-03-2018 AL504_RS29560 b28a1de923f56230abbebbdec0a9e36f 345 Pfam PF01544 CorA-like Mg2+ transporter protein 55 338 9.2E-48 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AL504_RS29560 b28a1de923f56230abbebbdec0a9e36f 345 SUPERFAMILY SSF144083 280 341 5.62E-15 T 28-03-2018 AL504_RS29560 b28a1de923f56230abbebbdec0a9e36f 345 SUPERFAMILY SSF143865 14 276 6.67E-35 T 28-03-2018 AL504_RS29560 b28a1de923f56230abbebbdec0a9e36f 345 Gene3D G3DSA:1.20.58.340 157 274 3.0E-10 T 28-03-2018 AL504_RS29560 b28a1de923f56230abbebbdec0a9e36f 345 Gene3D G3DSA:1.20.58.340 275 344 1.4E-16 T 28-03-2018 AL504_RS14340 82ef5186e36211335f9eef424e0f73a3 255 Gene3D G3DSA:3.90.226.10 4 212 1.9E-61 T 28-03-2018 AL504_RS14340 82ef5186e36211335f9eef424e0f73a3 255 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL504_RS14340 82ef5186e36211335f9eef424e0f73a3 255 Gene3D G3DSA:1.10.12.10 213 255 4.1E-17 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS14340 82ef5186e36211335f9eef424e0f73a3 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 254 1.0E-56 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS14340 82ef5186e36211335f9eef424e0f73a3 255 SUPERFAMILY SSF52096 1 254 3.26E-79 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS18105 54f2a7feed2b778671593ffffa91657c 401 Gene3D G3DSA:1.10.150.130 94 203 5.9E-18 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS18105 54f2a7feed2b778671593ffffa91657c 401 Gene3D G3DSA:1.10.443.10 204 388 2.1E-28 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS18105 54f2a7feed2b778671593ffffa91657c 401 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 153 3.9E-8 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL504_RS18105 54f2a7feed2b778671593ffffa91657c 401 SUPERFAMILY SSF56349 98 378 7.36E-51 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS18105 54f2a7feed2b778671593ffffa91657c 401 Pfam PF13356 Arm DNA-binding domain 6 93 1.0E-13 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AL504_RS18105 54f2a7feed2b778671593ffffa91657c 401 Pfam PF00589 Phage integrase family 232 371 2.1E-15 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS05870 18387e899af3d8b82da89c8fc8220caf 390 Gene3D G3DSA:2.60.40.1090 218 390 1.6E-4 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AL504_RS29765 8dd2a38c4c30d8a74fb7f3beba714ff8 377 Pfam PF07690 Major Facilitator Superfamily 6 311 7.8E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS29765 8dd2a38c4c30d8a74fb7f3beba714ff8 377 SUPERFAMILY SSF103473 2 375 3.79E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS29765 8dd2a38c4c30d8a74fb7f3beba714ff8 377 Gene3D G3DSA:1.20.1250.20 1 183 3.9E-17 T 28-03-2018 AL504_RS29765 8dd2a38c4c30d8a74fb7f3beba714ff8 377 Gene3D G3DSA:1.20.1250.20 184 375 1.2E-13 T 28-03-2018 AL504_RS25755 5387e250d9e585d3c2f64856ca5c4ecd 243 PIRSF PIRSF015601 2 243 1.5E-53 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS25755 5387e250d9e585d3c2f64856ca5c4ecd 243 SUPERFAMILY SSF75217 74 242 1.73E-48 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL504_RS25755 5387e250d9e585d3c2f64856ca5c4ecd 243 SUPERFAMILY SSF88697 3 55 3.15E-13 T 28-03-2018 IPR015947 PUA-like domain AL504_RS25755 5387e250d9e585d3c2f64856ca5c4ecd 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 16 241 4.3E-49 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS25755 5387e250d9e585d3c2f64856ca5c4ecd 243 Pfam PF04452 RNA methyltransferase 20 237 1.7E-65 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS25755 5387e250d9e585d3c2f64856ca5c4ecd 243 Gene3D G3DSA:3.40.1280.10 1 243 1.3E-79 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL504_RS23730 1f21c188e73ee8962e39bbd06f5a6871 757 Gene3D G3DSA:2.40.170.20 230 757 4.3E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23730 1f21c188e73ee8962e39bbd06f5a6871 757 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 117 757 6.8E-121 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS23730 1f21c188e73ee8962e39bbd06f5a6871 757 Pfam PF00593 TonB dependent receptor 323 755 8.2E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23730 1f21c188e73ee8962e39bbd06f5a6871 757 SUPERFAMILY SSF56935 76 757 1.31E-100 T 28-03-2018 AL504_RS23730 1f21c188e73ee8962e39bbd06f5a6871 757 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 740 757 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS23730 1f21c188e73ee8962e39bbd06f5a6871 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 208 1.9E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS23730 1f21c188e73ee8962e39bbd06f5a6871 757 Gene3D G3DSA:2.170.130.10 71 229 1.4E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS07625 c86b4411d14b3abbf97940ac576a15ee 284 Pfam PF01040 UbiA prenyltransferase family 19 268 1.4E-50 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL504_RS07625 c86b4411d14b3abbf97940ac576a15ee 284 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site AL504_RS07625 c86b4411d14b3abbf97940ac576a15ee 284 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.975 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL504_RS07625 c86b4411d14b3abbf97940ac576a15ee 284 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 7.2E-80 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL504_RS23920 ef4f8d77848ead6c9aaf5cc7068fd81a 197 Gene3D G3DSA:3.30.1330.110 3 192 1.8E-72 T 28-03-2018 IPR009569 Amino acid synthesis, putative AL504_RS23920 ef4f8d77848ead6c9aaf5cc7068fd81a 197 SUPERFAMILY SSF160519 1 192 2.22E-69 T 28-03-2018 IPR009569 Amino acid synthesis, putative AL504_RS23920 ef4f8d77848ead6c9aaf5cc7068fd81a 197 Pfam PF06684 Amino acid synthesis 5 181 1.0E-67 T 28-03-2018 IPR009569 Amino acid synthesis, putative AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 SUPERFAMILY SSF51735 232 377 4.46E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Gene3D G3DSA:3.40.50.720 2 138 3.4E-27 T 28-03-2018 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 SUPERFAMILY SSF116726 136 221 2.88E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Gene3D G3DSA:3.30.70.1450 139 226 3.2E-16 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 SUPERFAMILY SSF51735 1 151 4.81E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Pfam PF02254 TrkA-N domain 3 124 4.3E-28 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Pfam PF02254 TrkA-N domain 234 351 9.3E-25 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.9E-21 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.9E-21 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.9E-21 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.9E-21 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.9E-21 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Pfam PF02080 TrkA-C domain 154 221 5.1E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Pfam PF02080 TrkA-C domain 390 452 2.0E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Gene3D G3DSA:3.30.70.1450 368 459 8.7E-18 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 Gene3D G3DSA:3.40.50.720 227 366 3.9E-27 T 28-03-2018 AL504_RS21330 4ca2ea74bbbe807ae6e276f6bc3f3c4b 459 SUPERFAMILY SSF116726 391 441 1.44E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 Pfam PF07715 TonB-dependent Receptor Plug Domain 149 260 1.2E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 152 785 1.2E-83 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 SUPERFAMILY SSF56935 139 785 1.06E-113 T 28-03-2018 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 Pfam PF07660 Secretin and TonB N terminus short domain 70 119 1.9E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 Pfam PF00593 TonB dependent receptor 355 784 1.5E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 SMART SM00965 69 120 7.6E-14 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 Gene3D G3DSA:2.40.170.20 270 786 4.9E-80 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS23970 8687c9dbdb2c7ff615472a037abeddd1 787 Gene3D G3DSA:2.170.130.10 120 269 1.1E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS05980 cf1be98379eb78e8e47538455849c441 189 Gene3D G3DSA:1.10.357.10 52 186 4.2E-11 T 28-03-2018 AL504_RS05980 cf1be98379eb78e8e47538455849c441 189 Gene3D G3DSA:1.10.10.60 5 51 1.5E-7 T 28-03-2018 AL504_RS05980 cf1be98379eb78e8e47538455849c441 189 SUPERFAMILY SSF46689 8 64 2.91E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS05980 cf1be98379eb78e8e47538455849c441 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 52 3.9E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS05980 cf1be98379eb78e8e47538455849c441 189 ProSitePatterns PS00356 LacI-type HTH domain signature. 26 44 - T 28-03-2018 AL504_RS05980 cf1be98379eb78e8e47538455849c441 189 SUPERFAMILY SSF48498 80 158 1.08E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS27010 29192a756fe30e70c9c35a4725869ba1 324 PIRSF PIRSF017082 1 323 5.3E-84 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS27010 29192a756fe30e70c9c35a4725869ba1 324 SUPERFAMILY SSF53850 92 287 1.01E-12 T 28-03-2018 AL504_RS27010 29192a756fe30e70c9c35a4725869ba1 324 Gene3D G3DSA:3.40.190.10 123 266 3.4E-12 T 28-03-2018 AL504_RS27010 29192a756fe30e70c9c35a4725869ba1 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 320 3.3E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11105 3ea73a93a305a05bbe2448ed71f36d54 335 Gene3D G3DSA:3.40.50.300 6 202 1.1E-34 T 28-03-2018 AL504_RS11105 3ea73a93a305a05bbe2448ed71f36d54 335 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 237 326 2.0E-11 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS11105 3ea73a93a305a05bbe2448ed71f36d54 335 SUPERFAMILY SSF52540 7 187 1.6E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11105 3ea73a93a305a05bbe2448ed71f36d54 335 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 188 5.0E-43 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL504_RS11105 3ea73a93a305a05bbe2448ed71f36d54 335 SUPERFAMILY SSF90002 236 326 7.72E-15 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS11105 3ea73a93a305a05bbe2448ed71f36d54 335 Gene3D G3DSA:3.30.1220.10 226 328 6.2E-10 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS11105 3ea73a93a305a05bbe2448ed71f36d54 335 SMART SM00833 236 330 7.2E-15 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 Gene3D G3DSA:3.40.50.970 463 647 3.4E-32 T 28-03-2018 AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 752 939 6.3E-22 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 SUPERFAMILY SSF53323 744 945 4.05E-31 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 Gene3D G3DSA:3.40.50.920 293 419 2.2E-6 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 SUPERFAMILY SSF52518 30 211 7.65E-21 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 Gene3D G3DSA:3.40.50.970 25 292 6.5E-22 T 28-03-2018 AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 SUPERFAMILY SSF52518 459 645 9.64E-17 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 Gene3D G3DSA:3.40.920.10 742 953 5.2E-49 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AL504_RS16310 42893dc6cdb1e55a07359ed8156a37b7 1203 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 479 628 1.3E-8 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 Gene3D G3DSA:3.40.50.720 1 256 1.0E-63 T 28-03-2018 AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 8.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 8.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.8E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 255 4.1E-58 T 28-03-2018 AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 SUPERFAMILY SSF51735 6 255 6.77E-72 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28860 ed5b80129e82b3fb5ade9355168369ef 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26080 eca297b419bec4b4de22749d7a39756d 263 SMART SM00079 35 258 0.0022 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL504_RS26080 eca297b419bec4b4de22749d7a39756d 263 Gene3D G3DSA:3.40.190.10 178 256 1.6E-10 T 28-03-2018 AL504_RS26080 eca297b419bec4b4de22749d7a39756d 263 SUPERFAMILY SSF53850 7 258 1.38E-59 T 28-03-2018 AL504_RS26080 eca297b419bec4b4de22749d7a39756d 263 Gene3D G3DSA:3.40.190.10 24 177 5.9E-36 T 28-03-2018 AL504_RS26080 eca297b419bec4b4de22749d7a39756d 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 256 1.0E-53 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS26080 eca297b419bec4b4de22749d7a39756d 263 SMART SM00062 35 259 9.7E-50 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS22995 0d02cb6fa3c138d95b1e1892f05b91ea 297 Gene3D G3DSA:1.20.1250.20 146 263 0.21 T 28-03-2018 AL504_RS22995 0d02cb6fa3c138d95b1e1892f05b91ea 297 Gene3D G3DSA:1.20.1250.20 2 133 0.028 T 28-03-2018 AL504_RS22995 0d02cb6fa3c138d95b1e1892f05b91ea 297 Pfam PF02535 ZIP Zinc transporter 147 292 4.3E-22 T 28-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AL504_RS25670 e5c87e5f12eb76e0848a8e63dc9c8c07 212 Gene3D G3DSA:3.40.50.2020 1 206 1.2E-58 T 28-03-2018 AL504_RS25670 e5c87e5f12eb76e0848a8e63dc9c8c07 212 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 1.6E-62 T 28-03-2018 AL504_RS25670 e5c87e5f12eb76e0848a8e63dc9c8c07 212 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.571 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL504_RS25670 e5c87e5f12eb76e0848a8e63dc9c8c07 212 SUPERFAMILY SSF53271 3 206 7.74E-66 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL504_RS25670 e5c87e5f12eb76e0848a8e63dc9c8c07 212 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 1.9E-83 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL504_RS14140 ba6e3717673a3fe7662ff3bd7cc5427e 325 SUPERFAMILY SSF53850 115 285 1.82E-12 T 28-03-2018 AL504_RS14140 ba6e3717673a3fe7662ff3bd7cc5427e 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 1.2E-91 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14140 ba6e3717673a3fe7662ff3bd7cc5427e 325 PIRSF PIRSF017082 1 325 3.8E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14140 ba6e3717673a3fe7662ff3bd7cc5427e 325 Gene3D G3DSA:3.40.190.10 34 296 1.2E-11 T 28-03-2018 AL504_RS25205 ead1b4b13a07da638b72fdfb2e911bbd 166 SUPERFAMILY SSF46767 71 152 2.75E-30 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS25205 ead1b4b13a07da638b72fdfb2e911bbd 166 Gene3D G3DSA:1.10.10.10 68 154 1.8E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25205 ead1b4b13a07da638b72fdfb2e911bbd 166 Gene3D G3DSA:3.30.160.70 1 67 1.9E-4 T 28-03-2018 AL504_RS25205 ead1b4b13a07da638b72fdfb2e911bbd 166 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 152 34.438 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AL504_RS25205 ead1b4b13a07da638b72fdfb2e911bbd 166 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 4.7E-33 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS25205 ead1b4b13a07da638b72fdfb2e911bbd 166 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 122 128 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL504_RS25205 ead1b4b13a07da638b72fdfb2e911bbd 166 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 152 5.8E-31 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL504_RS19605 cedf9fc447e24a1f8f74bfa1dcb8066e 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 118 1.6E-17 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL504_RS19605 cedf9fc447e24a1f8f74bfa1dcb8066e 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 119 2.7E-19 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS19605 cedf9fc447e24a1f8f74bfa1dcb8066e 126 Gene3D G3DSA:1.20.5.1030 67 118 6.5E-20 T 28-03-2018 AL504_RS19605 cedf9fc447e24a1f8f74bfa1dcb8066e 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 121 11.537 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL504_RS19605 cedf9fc447e24a1f8f74bfa1dcb8066e 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 4.9E-8 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL504_RS19605 cedf9fc447e24a1f8f74bfa1dcb8066e 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 4.9E-8 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL504_RS19605 cedf9fc447e24a1f8f74bfa1dcb8066e 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 4.9E-8 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL504_RS03990 6add998c24b38616340794cbfdfffe97 310 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 145 172 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL504_RS03990 6add998c24b38616340794cbfdfffe97 310 SUPERFAMILY SSF51735 99 280 2.04E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS03990 6add998c24b38616340794cbfdfffe97 310 Gene3D G3DSA:3.40.50.720 114 282 1.8E-51 T 28-03-2018 AL504_RS03990 6add998c24b38616340794cbfdfffe97 310 Gene3D G3DSA:3.40.50.720 2 113 8.5E-27 T 28-03-2018 AL504_RS03990 6add998c24b38616340794cbfdfffe97 310 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 11 290 2.1E-17 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS03990 6add998c24b38616340794cbfdfffe97 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 279 7.9E-48 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS03990 6add998c24b38616340794cbfdfffe97 310 SUPERFAMILY SSF52283 1 133 2.08E-28 T 28-03-2018 AL504_RS13375 b9fc02c12f7ad02439d43a861815685f 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL504_RS13375 b9fc02c12f7ad02439d43a861815685f 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 1.2E-217 T 28-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL504_RS13375 b9fc02c12f7ad02439d43a861815685f 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 412 1.6E-111 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS13375 b9fc02c12f7ad02439d43a861815685f 418 Gene3D G3DSA:3.40.718.10 19 418 1.7E-125 T 28-03-2018 AL504_RS13375 b9fc02c12f7ad02439d43a861815685f 418 SUPERFAMILY SSF53659 4 418 1.46E-140 T 28-03-2018 AL504_RS13375 b9fc02c12f7ad02439d43a861815685f 418 SMART SM01329 30 414 7.8E-164 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS21600 6df5f6476e1b097424ff6d63b657d186 261 SUPERFAMILY SSF51658 1 258 1.28E-76 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL504_RS21600 6df5f6476e1b097424ff6d63b657d186 261 Pfam PF01261 Xylose isomerase-like TIM barrel 22 218 3.2E-27 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL504_RS21600 6df5f6476e1b097424ff6d63b657d186 261 Gene3D G3DSA:3.20.20.150 1 261 1.8E-51 T 28-03-2018 AL504_RS21600 6df5f6476e1b097424ff6d63b657d186 261 PIRSF PIRSF006241 1 261 1.7E-95 T 28-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 Gene3D G3DSA:1.10.10.10 13 89 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 SUPERFAMILY SSF46785 21 89 6.25E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 SUPERFAMILY SSF53383 135 501 5.06E-88 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 8.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 8.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 Gene3D G3DSA:3.40.640.10 182 397 7.1E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 SMART SM00345 28 87 1.3E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 3.1E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 Pfam PF00155 Aminotransferase class I and II 154 420 2.0E-22 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS31380 c92b6f8f2bbb8562c8ba5c76b83e6498 503 Gene3D G3DSA:3.90.1150.10 398 503 2.3E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS10535 6eba8995075e4c84d9d74a5212bb14d6 357 SUPERFAMILY SSF51569 7 348 1.15E-136 T 28-03-2018 AL504_RS10535 6eba8995075e4c84d9d74a5212bb14d6 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.6E-164 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL504_RS10535 6eba8995075e4c84d9d74a5212bb14d6 357 Pfam PF00793 DAHP synthetase I family 40 338 7.6E-103 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL504_RS10535 6eba8995075e4c84d9d74a5212bb14d6 357 Gene3D G3DSA:3.20.20.70 8 354 1.2E-132 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS10535 6eba8995075e4c84d9d74a5212bb14d6 357 PIRSF PIRSF001361 1 352 9.3E-161 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL504_RS03505 da7b50fde639296dfcdab86d87230b94 507 Pfam PF04909 Amidohydrolase 95 324 3.0E-13 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS03505 da7b50fde639296dfcdab86d87230b94 507 SUPERFAMILY SSF51556 96 333 1.81E-37 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS03505 da7b50fde639296dfcdab86d87230b94 507 SUPERFAMILY SSF51556 396 481 1.81E-37 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS03505 da7b50fde639296dfcdab86d87230b94 507 SUPERFAMILY SSF51556 21 51 1.81E-37 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS03505 da7b50fde639296dfcdab86d87230b94 507 Gene3D G3DSA:3.20.20.140 17 482 4.1E-40 T 28-03-2018 AL504_RS06180 fd79d310ec5007c8d28b1ef1e5d308ca 254 Gene3D G3DSA:3.40.1180.10 1 246 7.4E-89 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL504_RS06180 fd79d310ec5007c8d28b1ef1e5d308ca 254 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.083 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL504_RS06180 fd79d310ec5007c8d28b1ef1e5d308ca 254 SUPERFAMILY SSF64005 12 238 9.94E-83 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL504_RS06180 fd79d310ec5007c8d28b1ef1e5d308ca 254 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 AL504_RS06180 fd79d310ec5007c8d28b1ef1e5d308ca 254 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 2.0E-77 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL504_RS06180 fd79d310ec5007c8d28b1ef1e5d308ca 254 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 2.2E-84 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL504_RS12315 eae887763103579c3706cbc3294c1a49 236 Pfam PF00005 ABC transporter 21 163 1.7E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12315 eae887763103579c3706cbc3294c1a49 236 Gene3D G3DSA:3.40.50.300 1 235 5.8E-48 T 28-03-2018 AL504_RS12315 eae887763103579c3706cbc3294c1a49 236 SUPERFAMILY SSF52540 4 229 3.42E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12315 eae887763103579c3706cbc3294c1a49 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS12315 eae887763103579c3706cbc3294c1a49 236 SMART SM00382 30 215 1.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS24240 44fe6979cab7279510327e39af649b17 578 SUPERFAMILY SSF52540 325 564 1.02E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS24240 44fe6979cab7279510327e39af649b17 578 SMART SM00382 355 541 3.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS24240 44fe6979cab7279510327e39af649b17 578 Gene3D G3DSA:3.40.50.300 321 571 8.0E-74 T 28-03-2018 AL504_RS24240 44fe6979cab7279510327e39af649b17 578 Pfam PF00664 ABC transporter transmembrane region 21 279 1.7E-20 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS24240 44fe6979cab7279510327e39af649b17 578 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS24240 44fe6979cab7279510327e39af649b17 578 SUPERFAMILY SSF90123 4 317 1.57E-46 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS24240 44fe6979cab7279510327e39af649b17 578 Gene3D G3DSA:1.20.1560.10 1 320 2.3E-39 T 28-03-2018 AL504_RS24240 44fe6979cab7279510327e39af649b17 578 Pfam PF00005 ABC transporter 346 495 7.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 Gene3D G3DSA:3.30.560.10 106 487 1.7E-104 T 28-03-2018 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 Pfam PF00732 GMC oxidoreductase 6 296 1.1E-88 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 255 269 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 Pfam PF05199 GMC oxidoreductase 388 523 1.4E-39 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 Gene3D G3DSA:4.10.450.10 43 105 5.0E-29 T 28-03-2018 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 Gene3D G3DSA:3.40.50.720 6 42 3.9E-4 T 28-03-2018 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 PIRSF PIRSF000137 1 536 9.3E-149 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 SUPERFAMILY SSF54373 291 474 3.83E-60 T 28-03-2018 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 SUPERFAMILY SSF51905 473 532 9.88E-89 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS00380 fb6b78c1fc0456729190d6768fea554b 536 SUPERFAMILY SSF51905 3 289 9.88E-89 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS18580 b5a30ddd32bec58da4d89a98d11187d6 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 256 1.6E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18580 b5a30ddd32bec58da4d89a98d11187d6 266 Gene3D G3DSA:1.10.3720.10 2 254 1.1E-36 T 28-03-2018 AL504_RS18580 b5a30ddd32bec58da4d89a98d11187d6 266 SUPERFAMILY SSF161098 7 265 2.49E-60 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27105 758219b2d88b2fa219d125c27e007c23 149 SUPERFAMILY SSF46894 54 140 1.11E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS27105 758219b2d88b2fa219d125c27e007c23 149 Gene3D G3DSA:1.10.10.10 41 145 6.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27105 758219b2d88b2fa219d125c27e007c23 149 Pfam PF00486 Transcriptional regulatory protein, C terminal 61 139 2.6E-11 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS27105 758219b2d88b2fa219d125c27e007c23 149 SMART SM00862 61 139 7.3E-10 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS18380 c40c35a89113ac3973d02452b7ada39b 82 Pfam PF10038 Protein of unknown function (DUF2274) 6 70 2.0E-25 T 28-03-2018 IPR018733 Protein of unknown function DUF2274 AL504_RS27745 f0c66f51da9b3dda6ccef0695c05db69 208 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.4E-53 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL504_RS27745 f0c66f51da9b3dda6ccef0695c05db69 208 SUPERFAMILY SSF55821 1 202 1.28E-57 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS27745 f0c66f51da9b3dda6ccef0695c05db69 208 Pfam PF01300 Telomere recombination 23 198 3.1E-39 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL504_RS27745 f0c66f51da9b3dda6ccef0695c05db69 208 Gene3D G3DSA:3.90.870.10 1 206 2.3E-55 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS20710 fab428c2e703a90d4facd06eea015df7 476 PIRSF PIRSF005522 1 476 1.3E-228 T 28-03-2018 IPR016450 Uncharacterised conserved protein UCP005522 AL504_RS20710 fab428c2e703a90d4facd06eea015df7 476 Pfam PF14403 Circularly permuted ATP-grasp type 2 77 452 7.3E-166 T 28-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 AL504_RS20710 fab428c2e703a90d4facd06eea015df7 476 SUPERFAMILY SSF56059 322 467 9.36E-62 T 28-03-2018 AL504_RS20710 fab428c2e703a90d4facd06eea015df7 476 SUPERFAMILY SSF56059 20 215 9.36E-62 T 28-03-2018 AL504_RS20710 fab428c2e703a90d4facd06eea015df7 476 Gene3D G3DSA:3.30.470.20 55 178 0.093 T 28-03-2018 AL504_RS20710 fab428c2e703a90d4facd06eea015df7 476 Gene3D G3DSA:3.30.470.20 341 468 5.5E-5 T 28-03-2018 AL504_RS08665 c1f9afe55d970a54165f3c5caef598f3 338 Pfam PF01207 Dihydrouridine synthase (Dus) 10 301 2.5E-73 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL504_RS08665 c1f9afe55d970a54165f3c5caef598f3 338 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 7 318 2.3E-121 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL504_RS08665 c1f9afe55d970a54165f3c5caef598f3 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL504_RS08665 c1f9afe55d970a54165f3c5caef598f3 338 Gene3D G3DSA:3.20.20.70 5 245 2.1E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS08665 c1f9afe55d970a54165f3c5caef598f3 338 SUPERFAMILY SSF51395 7 301 7.33E-65 T 28-03-2018 AL504_RS08665 c1f9afe55d970a54165f3c5caef598f3 338 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 2 322 46.172 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 264 274 1.0E-22 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 382 398 1.0E-22 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 235 249 1.0E-22 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 426 443 1.0E-22 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 332 344 1.0E-22 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 331 342 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 Gene3D G3DSA:1.10.287.730 161 186 3.8E-10 T 28-03-2018 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 Gene3D G3DSA:3.30.70.1170 188 243 9.1E-18 T 28-03-2018 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 108 444 7.6E-86 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 Gene3D G3DSA:1.10.940.10 18 160 3.1E-19 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 SUPERFAMILY SSF48013 32 164 7.19E-10 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 SUPERFAMILY SSF53335 157 443 6.18E-68 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 Gene3D G3DSA:3.40.50.150 244 445 4.2E-49 T 28-03-2018 AL504_RS21310 2959e7b3bb701acda197b59c6a6b59c4 445 Pfam PF01189 16S rRNA methyltransferase RsmB/F 254 441 8.4E-49 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS10990 79d59c53e60f7e210ee3724e7d03ede7 463 SUPERFAMILY SSF143548 17 157 6.54E-45 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL504_RS10990 79d59c53e60f7e210ee3724e7d03ede7 463 Gene3D G3DSA:3.30.1330.90 11 160 9.1E-55 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL504_RS10990 79d59c53e60f7e210ee3724e7d03ede7 463 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 460 8.4E-210 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL504_RS10990 79d59c53e60f7e210ee3724e7d03ede7 463 Pfam PF03313 Serine dehydratase alpha chain 187 457 3.1E-104 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AL504_RS10990 79d59c53e60f7e210ee3724e7d03ede7 463 Pfam PF03315 Serine dehydratase beta chain 4 156 1.5E-56 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL504_RS10990 79d59c53e60f7e210ee3724e7d03ede7 463 Gene3D G3DSA:1.10.4100.10 262 449 1.3E-30 T 28-03-2018 AL504_RS21105 732def65cf68603e5a545507680addf8 308 Pfam PF02603 HPr Serine kinase N terminus 3 127 2.3E-23 T 28-03-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AL504_RS21105 732def65cf68603e5a545507680addf8 308 Gene3D G3DSA:3.40.50.300 133 290 9.3E-42 T 28-03-2018 AL504_RS21105 732def65cf68603e5a545507680addf8 308 SUPERFAMILY SSF53795 132 298 1.95E-35 T 28-03-2018 AL504_RS21105 732def65cf68603e5a545507680addf8 308 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 1 306 37.481 T 28-03-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 AL504_RS21105 732def65cf68603e5a545507680addf8 308 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 3 301 8.8E-99 T 28-03-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 AL504_RS21105 732def65cf68603e5a545507680addf8 308 Gene3D G3DSA:3.40.1390.20 1 132 2.2E-29 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AL504_RS21105 732def65cf68603e5a545507680addf8 308 SUPERFAMILY SSF75138 7 131 1.7E-29 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AL504_RS21105 732def65cf68603e5a545507680addf8 308 Pfam PF07475 HPr Serine kinase C-terminal domain 129 299 1.5E-64 T 28-03-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AL504_RS09995 d28e327bddf71ed29f4398081780ad07 269 Gene3D G3DSA:1.10.3720.10 7 268 6.9E-40 T 28-03-2018 AL504_RS09995 d28e327bddf71ed29f4398081780ad07 269 SUPERFAMILY SSF161098 7 264 4.86E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS09995 d28e327bddf71ed29f4398081780ad07 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 260 1.2E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS11395 d020e66d49a605d832ad855b836c2b06 405 SUPERFAMILY SSF48452 40 176 1.59E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS11395 d020e66d49a605d832ad855b836c2b06 405 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 403 32.912 T 28-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AL504_RS11395 d020e66d49a605d832ad855b836c2b06 405 Gene3D G3DSA:1.25.40.10 14 177 1.0E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SUPERFAMILY SSF48403 208 262 7.19E-17 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SUPERFAMILY SSF48403 337 531 7.19E-17 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 Gene3D G3DSA:1.25.40.20 521 701 8.7E-19 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 Gene3D G3DSA:1.25.40.20 702 1100 3.7E-17 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 Gene3D G3DSA:1.25.40.20 108 325 1.9E-8 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 Gene3D G3DSA:1.25.40.20 332 454 2.2E-7 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SUPERFAMILY SSF48403 513 686 2.66E-25 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SUPERFAMILY SSF48403 796 867 2.66E-25 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 655 684 0.18 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 838 867 10.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 353 383 44.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 510 539 1700.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 475 504 0.22 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 805 834 0.24 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 440 469 250.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 622 651 5.1 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 SMART SM00248 215 244 36.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 Pfam PF13637 Ankyrin repeats (many copies) 807 858 2.1E-5 T 28-03-2018 AL504_RS30410 8c434b11347f5ab71e76aba577bb3222 1113 Gene3D G3DSA:1.25.40.20 455 520 3.9E-10 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 Pfam PF03466 LysR substrate binding domain 89 286 8.1E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 Gene3D G3DSA:3.40.190.10 180 259 2.1E-5 T 28-03-2018 AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 Gene3D G3DSA:1.10.10.10 1 85 1.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 Gene3D G3DSA:3.40.190.10 90 179 3.5E-13 T 28-03-2018 AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 SUPERFAMILY SSF46785 4 88 2.72E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15135 fa23a224f631eec1d706c30a6c594159 287 SUPERFAMILY SSF53850 90 286 7.6E-26 T 28-03-2018 AL504_RS13780 b978d572cef964a86bc2b94e36deec32 351 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 20 334 1.9E-60 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL504_RS09100 fc2c63a192548e6ed27c359a33a4437d 434 Pfam PF12221 Bacterial membrane protein N terminal 8 58 6.4E-11 T 28-03-2018 IPR020980 Menbrane protein HflK, N-terminal AL504_RS09100 fc2c63a192548e6ed27c359a33a4437d 434 TIGRFAM TIGR01933 hflK: HflK protein 101 376 3.9E-88 T 28-03-2018 IPR010201 HflK GO:0016021 AL504_RS09100 fc2c63a192548e6ed27c359a33a4437d 434 SMART SM00244 99 274 2.2E-21 T 28-03-2018 IPR001107 Band 7 domain AL504_RS09100 fc2c63a192548e6ed27c359a33a4437d 434 Pfam PF01145 SPFH domain / Band 7 family 103 289 1.1E-26 T 28-03-2018 IPR001107 Band 7 domain AL504_RS09100 fc2c63a192548e6ed27c359a33a4437d 434 SUPERFAMILY SSF117892 166 281 5.1E-18 T 28-03-2018 IPR001107 Band 7 domain AL504_RS22905 b34c2e319c100f7a1aa5f471ba95ce5d 131 Gene3D G3DSA:1.10.260.40 1 130 9.9E-19 T 28-03-2018 AL504_RS22905 b34c2e319c100f7a1aa5f471ba95ce5d 131 SUPERFAMILY SSF47413 9 74 2.69E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS22905 b34c2e319c100f7a1aa5f471ba95ce5d 131 Pfam PF01381 Helix-turn-helix 14 69 1.8E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS22905 b34c2e319c100f7a1aa5f471ba95ce5d 131 SMART SM00530 13 69 1.1E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS07965 0593320c036c7a0d68cb023cef20fe35 218 Gene3D G3DSA:3.90.470.20 93 184 1.2E-13 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS07965 0593320c036c7a0d68cb023cef20fe35 218 SUPERFAMILY SSF56214 82 196 5.89E-20 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS07965 0593320c036c7a0d68cb023cef20fe35 218 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 83 181 5.0E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS07965 0593320c036c7a0d68cb023cef20fe35 218 Gene3D G3DSA:3.90.470.20 55 92 3.2E-6 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 Pfam PF01965 DJ-1/PfpI family 17 173 8.4E-14 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 SMART SM00342 229 312 7.2E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 Pfam PF12833 Helix-turn-helix domain 235 313 6.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 SUPERFAMILY SSF46689 266 315 4.93E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 SUPERFAMILY SSF52317 8 194 1.63E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 308 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 Gene3D G3DSA:1.10.10.60 267 317 4.3E-11 T 28-03-2018 AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 SUPERFAMILY SSF46689 212 263 4.29E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 Gene3D G3DSA:3.40.50.880 3 211 4.6E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS00080 dc479f297e05b734dd9a74616dcffbd3 318 Gene3D G3DSA:1.10.10.60 212 266 1.8E-14 T 28-03-2018 AL504_RS28725 1eb4e2ff3a9deffad80daec27aa4af91 348 SUPERFAMILY SSF103088 241 346 5.1E-33 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS28725 1eb4e2ff3a9deffad80daec27aa4af91 348 Pfam PF00691 OmpA family 245 341 5.4E-21 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS28725 1eb4e2ff3a9deffad80daec27aa4af91 348 PRINTS PR01021 OMPA domain signature 291 307 2.0E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS28725 1eb4e2ff3a9deffad80daec27aa4af91 348 PRINTS PR01021 OMPA domain signature 246 268 2.0E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS28725 1eb4e2ff3a9deffad80daec27aa4af91 348 PRINTS PR01021 OMPA domain signature 276 291 2.0E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS28725 1eb4e2ff3a9deffad80daec27aa4af91 348 Pfam PF16234 Domain of unknown function (DUF4892) 55 148 5.2E-9 T 28-03-2018 IPR032608 Protein of unknown function DUF4892 AL504_RS28725 1eb4e2ff3a9deffad80daec27aa4af91 348 Gene3D G3DSA:3.30.1330.60 67 348 3.2E-36 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS29730 3eeaa3e941b35c76c32863cfb8768cc4 148 SUPERFAMILY SSF55961 2 145 4.66E-44 T 28-03-2018 AL504_RS29730 3eeaa3e941b35c76c32863cfb8768cc4 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 143 6.7E-30 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AL504_RS29730 3eeaa3e941b35c76c32863cfb8768cc4 148 Gene3D G3DSA:3.30.530.20 2 148 9.4E-31 T 28-03-2018 IPR023393 START-like domain AL504_RS19065 a8142f5191164a0539f4fe5d03fb6bdf 151 Pfam PF12680 SnoaL-like domain 34 133 1.5E-12 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS19065 a8142f5191164a0539f4fe5d03fb6bdf 151 Gene3D G3DSA:3.10.450.50 22 151 7.5E-24 T 28-03-2018 AL504_RS19065 a8142f5191164a0539f4fe5d03fb6bdf 151 SUPERFAMILY SSF54427 28 141 2.56E-24 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 Pfam PF07660 Secretin and TonB N terminus short domain 42 89 2.9E-8 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 Gene3D G3DSA:2.40.170.20 246 788 1.4E-58 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 Gene3D G3DSA:2.170.130.10 91 223 5.2E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 SUPERFAMILY SSF56935 103 789 2.49E-96 T 28-03-2018 AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 SMART SM00965 42 92 1.7E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 217 9.2E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 Pfam PF00593 TonB dependent receptor 311 786 3.0E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03620 f5cd9394ed8d429affbd3dac2ed0d04b 789 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 120 776 1.7E-115 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS26495 afd139f97e421841ae75946a899fd32c 284 SUPERFAMILY SSF161098 31 278 1.59E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26495 afd139f97e421841ae75946a899fd32c 284 Gene3D G3DSA:1.10.3720.10 10 280 3.2E-39 T 28-03-2018 AL504_RS26495 afd139f97e421841ae75946a899fd32c 284 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 21 282 1.6E-83 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL504_RS26495 afd139f97e421841ae75946a899fd32c 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 280 3.9E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07000 b60036bdf346eef326f41c685a59c9b1 537 Gene3D G3DSA:3.40.50.150 52 378 8.6E-8 T 28-03-2018 AL504_RS07000 b60036bdf346eef326f41c685a59c9b1 537 SUPERFAMILY SSF53335 174 329 6.05E-10 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Gene3D G3DSA:3.30.470.20 452 615 6.1E-27 T 28-03-2018 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Pfam PF00583 Acetyltransferase (GNAT) family 722 794 2.5E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 SUPERFAMILY SSF55729 652 801 3.26E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 146 271 7.1E-35 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 SUPERFAMILY SSF52210 277 435 2.22E-25 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Pfam PF13549 ATP-grasp domain 499 610 1.8E-22 T 28-03-2018 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Gene3D G3DSA:3.40.50.261 129 275 1.7E-28 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Gene3D G3DSA:3.40.630.30 642 813 3.0E-22 T 28-03-2018 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Gene3D G3DSA:3.40.50.261 276 440 4.1E-24 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 Gene3D G3DSA:3.40.50.720 9 128 6.5E-6 T 28-03-2018 AL504_RS15675 eab6d44d7d97bd73cb8cf746fb78cf27 813 SUPERFAMILY SSF52210 127 271 2.62E-31 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS28335 ba0c94ee6867aec6a0b9ab2f3c7f9fdb 324 SUPERFAMILY SSF53850 33 265 6.51E-7 T 28-03-2018 AL504_RS28335 ba0c94ee6867aec6a0b9ab2f3c7f9fdb 324 Gene3D G3DSA:3.40.190.10 124 253 1.6E-7 T 28-03-2018 AL504_RS28335 ba0c94ee6867aec6a0b9ab2f3c7f9fdb 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 317 2.7E-44 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS28335 ba0c94ee6867aec6a0b9ab2f3c7f9fdb 324 PIRSF PIRSF017082 2 323 3.2E-56 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 48 4.3E-6 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 73 119 2.4E-7 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 327 55.851 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 SUPERFAMILY SSF56349 135 324 6.47E-57 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 76 326 1.1E-101 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 Gene3D G3DSA:1.10.150.130 9 143 2.9E-20 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 Pfam PF00589 Phage integrase family 141 312 1.0E-49 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 10 327 57.338 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 Gene3D G3DSA:1.10.443.10 144 321 1.3E-47 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS26195 cebdf0efd15a47499d0e05ebfd02c46a 327 SUPERFAMILY SSF47823 11 129 9.81E-25 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AL504_RS22490 989ef27cfdac2ca773383909fadd1a0f 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 324 1.3E-88 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS22490 989ef27cfdac2ca773383909fadd1a0f 328 Gene3D G3DSA:3.40.190.10 128 255 1.9E-15 T 28-03-2018 AL504_RS22490 989ef27cfdac2ca773383909fadd1a0f 328 SUPERFAMILY SSF53850 95 286 1.45E-18 T 28-03-2018 AL504_RS22490 989ef27cfdac2ca773383909fadd1a0f 328 PIRSF PIRSF017082 2 328 1.2E-91 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 Pfam PF01546 Peptidase family M20/M25/M40 81 412 1.1E-28 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 414 2.4E-111 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 PIRSF PIRSF001235 8 419 6.6E-136 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 Gene3D G3DSA:3.40.630.10 7 250 4.1E-36 T 28-03-2018 AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 Gene3D G3DSA:3.40.630.10 251 420 9.0E-23 T 28-03-2018 AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 SUPERFAMILY SSF55031 216 334 8.37E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 SUPERFAMILY SSF53187 6 226 1.75E-85 T 28-03-2018 AL504_RS07755 c8ecfde99fc786cac50b6dd555885263 420 SUPERFAMILY SSF53187 342 415 1.75E-85 T 28-03-2018 AL504_RS09990 b9e8e51809e4bd3f8da413257bcbdbea 118 SUPERFAMILY SSF52833 4 116 4.16E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS09990 b9e8e51809e4bd3f8da413257bcbdbea 118 Pfam PF03960 ArsC family 43 114 1.3E-11 T 28-03-2018 IPR006660 Arsenate reductase-like AL504_RS09990 b9e8e51809e4bd3f8da413257bcbdbea 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 114 2.4E-27 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR AL504_RS09990 b9e8e51809e4bd3f8da413257bcbdbea 118 Gene3D G3DSA:3.40.30.10 1 117 2.0E-32 T 28-03-2018 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 Gene3D G3DSA:1.10.287.990 20 82 3.2E-27 T 28-03-2018 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 PIRSF PIRSF000349 1 192 1.5E-86 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 SUPERFAMILY SSF54719 85 191 2.62E-43 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.9E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 81 1.2E-34 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 SUPERFAMILY SSF46609 1 83 2.62E-36 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.1E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.1E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.1E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.1E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS30415 815f820b30ffd219b1679d0033f6e1d3 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.1E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS16725 eead608c7c24ee7e19de97f62bb7dc3d 374 Pfam PF07883 Cupin domain 279 346 1.9E-10 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS16725 eead608c7c24ee7e19de97f62bb7dc3d 374 Pfam PF07883 Cupin domain 108 174 4.8E-15 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS16725 eead608c7c24ee7e19de97f62bb7dc3d 374 Gene3D G3DSA:2.60.120.10 44 366 1.6E-35 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS16725 eead608c7c24ee7e19de97f62bb7dc3d 374 SUPERFAMILY SSF51182 22 371 2.07E-115 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS25630 9f4b8e70f3f1e3687055074effc6d380 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 90 2.2E-9 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL504_RS25630 9f4b8e70f3f1e3687055074effc6d380 93 Gene3D G3DSA:3.30.2310.20 3 90 4.3E-5 T 28-03-2018 AL504_RS25630 9f4b8e70f3f1e3687055074effc6d380 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 4.5E-18 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL504_RS30325 9ddb7b9a441c33893302ae35afad399d 368 SUPERFAMILY SSF89733 12 364 2.62E-98 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS30325 9ddb7b9a441c33893302ae35afad399d 368 Gene3D G3DSA:3.30.1370.60 87 328 5.8E-84 T 28-03-2018 AL504_RS30325 9ddb7b9a441c33893302ae35afad399d 368 Pfam PF02615 Malate/L-lactate dehydrogenase 15 354 3.0E-109 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS30325 9ddb7b9a441c33893302ae35afad399d 368 Gene3D G3DSA:1.10.1530.10 11 86 1.2E-19 T 28-03-2018 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 Gene3D G3DSA:3.30.470.20 211 444 4.8E-95 T 28-03-2018 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.1E-45 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 SMART SM00878 336 441 8.5E-65 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 SUPERFAMILY SSF56059 83 347 1.77E-70 T 28-03-2018 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 4.6E-78 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 Gene3D G3DSA:3.40.50.20 1 123 1.4E-53 T 28-03-2018 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.8E-221 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 SUPERFAMILY SSF51246 331 443 3.4E-43 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 Gene3D G3DSA:3.30.1490.20 124 210 3.2E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 7.2E-39 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS15790 1e9d0614fe72bd12e893d133cf553b14 448 SUPERFAMILY SSF52440 1 113 2.66E-48 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 Gene3D G3DSA:3.40.50.20 183 334 5.1E-15 T 28-03-2018 AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 134 2.9E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 Gene3D G3DSA:3.90.180.10 1 182 3.0E-49 T 28-03-2018 AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 SMART SM00829 14 334 0.0063 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 SUPERFAMILY SSF50129 2 171 1.52E-41 T 28-03-2018 IPR011032 GroES-like AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 SUPERFAMILY SSF51735 139 298 1.32E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL504_RS24075 982284f1f590e3d68033209bbaec6ab8 344 Pfam PF00107 Zinc-binding dehydrogenase 176 298 3.6E-20 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS14465 9f7c4cf3815e1dfec7f7f7cd94b18de4 207 SUPERFAMILY SSF52218 1 207 3.22E-34 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS14465 9f7c4cf3815e1dfec7f7f7cd94b18de4 207 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 204 21.612 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AL504_RS14465 9f7c4cf3815e1dfec7f7f7cd94b18de4 207 Gene3D G3DSA:3.40.50.360 1 207 5.7E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS14465 9f7c4cf3815e1dfec7f7f7cd94b18de4 207 Pfam PF02525 Flavodoxin-like fold 1 201 2.7E-31 T 28-03-2018 IPR003680 Flavodoxin-like fold AL504_RS20855 6df58280a084ef2d70da0faf69f4d7be 280 Gene3D G3DSA:3.40.50.300 11 258 1.1E-46 T 28-03-2018 AL504_RS20855 6df58280a084ef2d70da0faf69f4d7be 280 Pfam PF00005 ABC transporter 34 185 5.5E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS20855 6df58280a084ef2d70da0faf69f4d7be 280 SMART SM00382 43 235 7.9E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS20855 6df58280a084ef2d70da0faf69f4d7be 280 SUPERFAMILY SSF52540 16 257 1.22E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25635 5ef8837c3fe180bc0d56a867ef13e519 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 371 2.3E-159 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL504_RS25635 5ef8837c3fe180bc0d56a867ef13e519 378 Gene3D G3DSA:3.20.20.105 1 376 9.6E-157 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL504_RS25635 5ef8837c3fe180bc0d56a867ef13e519 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 372 55.233 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL504_RS25635 5ef8837c3fe180bc0d56a867ef13e519 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 371 3.8E-166 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL504_RS25635 5ef8837c3fe180bc0d56a867ef13e519 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 369 6.4E-91 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL504_RS25635 5ef8837c3fe180bc0d56a867ef13e519 378 SUPERFAMILY SSF51713 3 371 1.14E-157 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL504_RS20385 9b3bf5d61621c60f56547fc4c1cf02a7 389 Gene3D G3DSA:3.40.50.2000 2 209 5.9E-54 T 28-03-2018 AL504_RS20385 9b3bf5d61621c60f56547fc4c1cf02a7 389 Gene3D G3DSA:3.40.50.2000 210 349 4.3E-24 T 28-03-2018 AL504_RS20385 9b3bf5d61621c60f56547fc4c1cf02a7 389 SUPERFAMILY SSF53756 5 374 3.53E-95 T 28-03-2018 AL504_RS20385 9b3bf5d61621c60f56547fc4c1cf02a7 389 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 372 1.8E-93 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 AL504_RS20385 9b3bf5d61621c60f56547fc4c1cf02a7 389 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 5 370 5.9E-141 T 28-03-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-4085001 AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 Gene3D G3DSA:3.40.50.980 221 378 5.5E-41 T 28-03-2018 AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 Gene3D G3DSA:3.30.300.30 462 567 1.5E-27 T 28-03-2018 AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 SUPERFAMILY SSF56801 14 561 1.06E-147 T 28-03-2018 AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 Gene3D G3DSA:3.40.50.980 26 220 2.6E-41 T 28-03-2018 AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 Pfam PF00501 AMP-binding enzyme 35 468 1.4E-106 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 Pfam PF13193 AMP-binding enzyme C-terminal domain 477 551 2.1E-19 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS14635 c46458e3542084c7465bfda4fa8cd9d2 571 Gene3D G3DSA:2.30.38.10 379 461 3.2E-27 T 28-03-2018 AL504_RS24005 c6b220bd9b50415e2f5d471ddee5db53 301 Gene3D G3DSA:3.40.190.10 185 271 2.2E-19 T 28-03-2018 AL504_RS24005 c6b220bd9b50415e2f5d471ddee5db53 301 SUPERFAMILY SSF53850 99 299 8.28E-34 T 28-03-2018 AL504_RS24005 c6b220bd9b50415e2f5d471ddee5db53 301 Pfam PF03466 LysR substrate binding domain 98 294 6.5E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24005 c6b220bd9b50415e2f5d471ddee5db53 301 SUPERFAMILY SSF46785 11 92 1.25E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24005 c6b220bd9b50415e2f5d471ddee5db53 301 Gene3D G3DSA:1.10.10.10 8 92 2.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24005 c6b220bd9b50415e2f5d471ddee5db53 301 Gene3D G3DSA:3.40.190.10 96 184 2.5E-19 T 28-03-2018 AL504_RS24005 c6b220bd9b50415e2f5d471ddee5db53 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 5.9E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SUPERFAMILY SSF52821 379 527 5.11E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 Pfam PF00581 Rhodanese-like domain 139 232 2.3E-10 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 Pfam PF00581 Rhodanese-like domain 18 108 2.6E-11 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 Pfam PF00581 Rhodanese-like domain 277 363 4.3E-7 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 Gene3D G3DSA:3.40.250.10 121 259 2.0E-18 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SMART SM00450 380 473 5.2 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SMART SM00450 14 112 7.8E-15 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SMART SM00450 275 371 1.2E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SMART SM00450 138 236 1.0E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 Gene3D G3DSA:3.40.250.10 2 118 4.2E-22 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 Gene3D G3DSA:3.40.250.10 260 376 1.1E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SUPERFAMILY SSF52821 114 242 5.24E-29 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SUPERFAMILY SSF52821 11 127 5.5E-25 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 Gene3D G3DSA:3.40.250.10 377 489 6.3E-9 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS19530 12830c01ac2089ef5a94ee537a8e455e 531 SUPERFAMILY SSF52821 265 364 1.24E-23 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS18485 5075a2bb613217650fb2eb2421ff2880 209 PIRSF PIRSF006324 1 207 7.5E-51 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS18485 5075a2bb613217650fb2eb2421ff2880 209 Pfam PF01810 LysE type translocator 16 203 1.9E-30 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS03275 0cf79074fcf59dbb6a9fb7f61d80c202 352 SUPERFAMILY SSF81345 22 343 9.29E-57 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS03275 0cf79074fcf59dbb6a9fb7f61d80c202 352 Pfam PF01032 FecCD transport family 42 344 1.7E-67 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS03275 0cf79074fcf59dbb6a9fb7f61d80c202 352 Gene3D G3DSA:1.10.3470.10 26 352 6.8E-47 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS21510 23835b9d3e84e7f2a08753360ca67ecf 321 SUPERFAMILY SSF53474 48 316 8.04E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS21510 23835b9d3e84e7f2a08753360ca67ecf 321 Gene3D G3DSA:3.40.50.1820 45 320 1.1E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS21510 23835b9d3e84e7f2a08753360ca67ecf 321 Pfam PF00756 Putative esterase 68 243 9.2E-13 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AL504_RS06370 1796d2243be12de9a63b103f6fc6a8e0 89 PIRSF PIRSF004669 1 89 6.6E-31 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS06370 1796d2243be12de9a63b103f6fc6a8e0 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 9.4E-29 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS06370 1796d2243be12de9a63b103f6fc6a8e0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.3E-21 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS06370 1796d2243be12de9a63b103f6fc6a8e0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.3E-21 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS06370 1796d2243be12de9a63b103f6fc6a8e0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.3E-21 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS06370 1796d2243be12de9a63b103f6fc6a8e0 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 1.4E-30 T 28-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AL504_RS29590 7c6d81fc453ea98767ba1c8a7cdc9e0c 484 Gene3D G3DSA:2.30.40.10 10 82 7.0E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS29590 7c6d81fc453ea98767ba1c8a7cdc9e0c 484 SUPERFAMILY SSF51338 29 67 7.95E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS29590 7c6d81fc453ea98767ba1c8a7cdc9e0c 484 SUPERFAMILY SSF51338 384 455 7.95E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS29590 7c6d81fc453ea98767ba1c8a7cdc9e0c 484 Pfam PF01979 Amidohydrolase family 64 433 3.9E-41 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS29590 7c6d81fc453ea98767ba1c8a7cdc9e0c 484 SUPERFAMILY SSF51556 67 384 3.68E-66 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS29590 7c6d81fc453ea98767ba1c8a7cdc9e0c 484 Gene3D G3DSA:3.20.20.140 83 400 4.9E-48 T 28-03-2018 AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 Pfam PF14525 AraC-binding-like domain 53 230 2.1E-43 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 SUPERFAMILY SSF46689 303 353 3.09E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 Pfam PF12833 Helix-turn-helix domain 273 352 2.6E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 304 347 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 SMART SM00342 267 351 3.4E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 SUPERFAMILY SSF46689 251 301 3.71E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 Gene3D G3DSA:1.10.10.60 307 354 8.2E-8 T 28-03-2018 AL504_RS07675 e06a666271870ecb23a9a4d7991b4f37 355 Gene3D G3DSA:1.10.10.60 249 306 1.6E-12 T 28-03-2018 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 PRINTS PR01004 Flagellar FliJ protein signature 108 126 5.4E-14 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 PRINTS PR01004 Flagellar FliJ protein signature 44 61 5.4E-14 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 PRINTS PR01004 Flagellar FliJ protein signature 63 84 5.4E-14 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 PRINTS PR01004 Flagellar FliJ protein signature 4 26 5.4E-14 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 PRINTS PR01004 Flagellar FliJ protein signature 126 146 5.4E-14 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 PIRSF PIRSF019404 1 148 6.6E-49 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 8.8E-31 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL504_RS06335 00024b3bbb0bdf9a305d26366edece95 149 Pfam PF02050 Flagellar FliJ protein 19 141 4.6E-35 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL504_RS05575 68a8986837d30fef877efeb72dac1d66 147 Gene3D G3DSA:3.30.479.10 1 147 1.3E-38 T 28-03-2018 AL504_RS05575 68a8986837d30fef877efeb72dac1d66 147 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 117 3.7E-29 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL504_RS05575 68a8986837d30fef877efeb72dac1d66 147 PIRSF PIRSF006113 88 147 0.15 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL504_RS05575 68a8986837d30fef877efeb72dac1d66 147 PIRSF PIRSF006113 1 81 1.5E-17 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL504_RS05575 68a8986837d30fef877efeb72dac1d66 147 SUPERFAMILY SSF55620 1 145 2.33E-40 T 28-03-2018 AL504_RS05575 68a8986837d30fef877efeb72dac1d66 147 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 146 4.2E-36 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL504_RS13935 2c2eeb65042ba08fab3cf0d9fa736d0f 261 Gene3D G3DSA:3.50.30.50 16 261 5.7E-50 T 28-03-2018 AL504_RS13935 2c2eeb65042ba08fab3cf0d9fa736d0f 261 Pfam PF04199 Putative cyclase 21 197 4.2E-30 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS13935 2c2eeb65042ba08fab3cf0d9fa736d0f 261 SUPERFAMILY SSF102198 18 257 9.81E-52 T 28-03-2018 AL504_RS07905 eaabfe70d2f31e5972a45d2291de8dd8 295 Pfam PF03466 LysR substrate binding domain 83 286 5.2E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07905 eaabfe70d2f31e5972a45d2291de8dd8 295 Gene3D G3DSA:3.40.190.10 169 257 1.3E-24 T 28-03-2018 AL504_RS07905 eaabfe70d2f31e5972a45d2291de8dd8 295 SUPERFAMILY SSF53850 84 289 4.16E-41 T 28-03-2018 AL504_RS07905 eaabfe70d2f31e5972a45d2291de8dd8 295 Gene3D G3DSA:1.10.10.10 1 80 3.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07905 eaabfe70d2f31e5972a45d2291de8dd8 295 Gene3D G3DSA:3.40.190.10 86 168 1.3E-4 T 28-03-2018 AL504_RS07905 eaabfe70d2f31e5972a45d2291de8dd8 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 7.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07905 eaabfe70d2f31e5972a45d2291de8dd8 295 SUPERFAMILY SSF46785 2 104 1.19E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13785 058f956d9e84fe3e0e581610bd5067fe 447 PIRSF PIRSF006446 1 441 1.9E-93 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL504_RS13785 058f956d9e84fe3e0e581610bd5067fe 447 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 435 1.8E-94 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL504_RS10955 cf68328465ac8a1f19787e856264317c 597 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 53 593 7.5E-247 T 28-03-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AL504_RS10955 cf68328465ac8a1f19787e856264317c 597 Gene3D G3DSA:1.10.3720.10 47 307 5.7E-36 T 28-03-2018 AL504_RS10955 cf68328465ac8a1f19787e856264317c 597 Gene3D G3DSA:1.10.3720.10 325 590 8.5E-23 T 28-03-2018 AL504_RS10955 cf68328465ac8a1f19787e856264317c 597 SUPERFAMILY SSF161098 52 300 8.11E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS10955 cf68328465ac8a1f19787e856264317c 597 SUPERFAMILY SSF161098 334 576 5.1E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS10955 cf68328465ac8a1f19787e856264317c 597 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 414 579 2.7E-7 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS10955 cf68328465ac8a1f19787e856264317c 597 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 303 3.2E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23085 e161bb928bfe670aa032915dbe36d0c1 147 Gene3D G3DSA:3.30.300.20 25 141 3.5E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS23085 e161bb928bfe670aa032915dbe36d0c1 147 Pfam PF02566 OsmC-like protein 35 132 4.5E-17 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS23085 e161bb928bfe670aa032915dbe36d0c1 147 Gene3D G3DSA:2.20.25.10 1 24 5.0E-11 T 28-03-2018 AL504_RS23085 e161bb928bfe670aa032915dbe36d0c1 147 SUPERFAMILY SSF82784 1 138 1.96E-36 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 SUPERFAMILY SSF52954 329 426 1.25E-20 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 Gene3D G3DSA:3.30.930.10 4 327 7.5E-70 T 28-03-2018 AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 SUPERFAMILY SSF55681 10 319 5.36E-99 T 28-03-2018 AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 6 426 31.998 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 Pfam PF03129 Anticodon binding domain 333 426 6.0E-11 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 Pfam PF13393 Histidyl-tRNA synthetase 13 315 1.3E-46 T 28-03-2018 AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 Gene3D G3DSA:3.40.50.800 328 427 8.0E-20 T 28-03-2018 IPR004154 Anticodon-binding AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 PIRSF PIRSF001549 4 427 3.2E-112 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AL504_RS09135 328ea0296768cdab86e56a8823abfa04 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 10 407 5.2E-151 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL504_RS08780 07b02fe9190f59e52709de7681a83704 149 Pfam PF16778 Phage tail assembly chaperone protein 76 144 6.5E-10 T 28-03-2018 IPR031893 Phage tail assembly chaperone protein AL504_RS03955 c1ea81a4fdbf8bc602a94af71524d869 382 Gene3D G3DSA:3.40.390.10 163 313 3.7E-18 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL504_RS03955 c1ea81a4fdbf8bc602a94af71524d869 382 Pfam PF15887 Putative zinc-binding metallo-peptidase 128 376 2.8E-102 T 28-03-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase AL504_RS03955 c1ea81a4fdbf8bc602a94af71524d869 382 Pfam PF10005 zinc-ribbon domain 30 122 4.9E-27 T 28-03-2018 IPR011201 Zinc-ribbon domain, bacteria AL504_RS03955 c1ea81a4fdbf8bc602a94af71524d869 382 PIRSF PIRSF012641 27 382 8.8E-126 T 28-03-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 SUPERFAMILY SSF103473 256 465 1.83E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 SUPERFAMILY SSF103473 21 210 1.83E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 Pfam PF07690 Major Facilitator Superfamily 25 416 3.5E-52 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 Gene3D G3DSA:1.20.1250.20 18 209 7.8E-32 T 28-03-2018 AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 6.7E-12 T 28-03-2018 AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 6.7E-12 T 28-03-2018 AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 6.7E-12 T 28-03-2018 AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 407 426 6.7E-12 T 28-03-2018 AL504_RS01410 cbeec3abfe23df258579963cfa6374bc 468 Gene3D G3DSA:1.20.1250.20 267 467 6.5E-23 T 28-03-2018 AL504_RS09360 497f9e314cb76674f0e9cb41687a3c03 212 Pfam PF13098 Thioredoxin-like domain 76 175 2.7E-7 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS09360 497f9e314cb76674f0e9cb41687a3c03 212 Gene3D G3DSA:3.40.30.10 35 206 3.9E-17 T 28-03-2018 AL504_RS09360 497f9e314cb76674f0e9cb41687a3c03 212 SUPERFAMILY SSF52833 46 169 2.18E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS09360 497f9e314cb76674f0e9cb41687a3c03 212 TIGRFAM TIGR02661 MauD: methylamine dehydrogenase accessory protein MauD 4 191 1.4E-62 T 28-03-2018 IPR013478 Methylamine dehydrogenase accessory protein MauD GO:0030416 AL504_RS18740 97c1416f5372f26988b33059c64dc481 323 PIRSF PIRSF017082 1 322 1.2E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS18740 97c1416f5372f26988b33059c64dc481 323 SUPERFAMILY SSF53850 95 278 5.25E-14 T 28-03-2018 AL504_RS18740 97c1416f5372f26988b33059c64dc481 323 Gene3D G3DSA:3.40.190.10 123 235 2.8E-11 T 28-03-2018 AL504_RS18740 97c1416f5372f26988b33059c64dc481 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 318 1.6E-89 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11845 467f73261c6c18e0547e049342e015e0 173 SUPERFAMILY SSF51161 1 169 3.6E-42 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS11845 467f73261c6c18e0547e049342e015e0 173 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 5.3E-9 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS11845 467f73261c6c18e0547e049342e015e0 173 Gene3D G3DSA:2.160.10.10 2 173 1.7E-37 T 28-03-2018 AL504_RS20605 400ff0e765e1da9f60083fc8bd6ed8b6 296 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 17 287 2.8E-66 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL504_RS20605 400ff0e765e1da9f60083fc8bd6ed8b6 296 PIRSF PIRSF026649 1 296 1.4E-78 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Gene3D G3DSA:2.150.10.10 508 596 3.8E-6 T 28-03-2018 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Gene3D G3DSA:2.150.10.10 186 324 3.2E-31 T 28-03-2018 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Gene3D G3DSA:2.150.10.10 597 820 2.1E-4 T 28-03-2018 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Gene3D G3DSA:2.150.10.10 104 185 0.0019 T 28-03-2018 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 SUPERFAMILY SSF101967 159 330 3.4E-24 T 28-03-2018 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 SUPERFAMILY SSF101967 538 587 6.54E-5 T 28-03-2018 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 788 827 3.4E-9 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 565 602 5.0E-5 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 484 512 6.6E-8 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 304 339 1.5E-8 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Gene3D G3DSA:1.20.5.170 325 492 2.5E-7 T 28-03-2018 AL504_RS28960 24a4f5710a56775e7c4dbb8d5b718c85 1059 Pfam PF05658 Head domain of trimeric autotransporter adhesin 239 265 3.7E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AL504_RS15360 5ed09597d19d16fab5c1c5808b8a6cc3 218 Pfam PF06578 YOP proteins translocation protein K (YscK) 48 187 2.8E-8 T 28-03-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AL504_RS14045 0c26c99ca8b70d827bf5ee38175554b8 276 Pfam PF00899 ThiF family 21 274 5.0E-32 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL504_RS14045 0c26c99ca8b70d827bf5ee38175554b8 276 Gene3D G3DSA:3.40.50.720 6 276 2.2E-50 T 28-03-2018 AL504_RS14045 0c26c99ca8b70d827bf5ee38175554b8 276 SUPERFAMILY SSF69572 239 274 2.35E-54 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL504_RS14045 0c26c99ca8b70d827bf5ee38175554b8 276 SUPERFAMILY SSF69572 12 198 2.35E-54 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL504_RS08465 89ac14e493a94703aa6ff3b484ceec04 499 Gene3D G3DSA:3.40.309.10 283 479 1.6E-67 T 28-03-2018 AL504_RS08465 89ac14e493a94703aa6ff3b484ceec04 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS08465 89ac14e493a94703aa6ff3b484ceec04 499 Pfam PF00171 Aldehyde dehydrogenase family 29 492 1.0E-167 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS08465 89ac14e493a94703aa6ff3b484ceec04 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS08465 89ac14e493a94703aa6ff3b484ceec04 499 Gene3D G3DSA:3.40.605.10 7 282 1.9E-95 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS08465 89ac14e493a94703aa6ff3b484ceec04 499 SUPERFAMILY SSF53720 6 496 4.71E-165 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 SUPERFAMILY SSF46785 4 86 2.34E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 Gene3D G3DSA:1.10.10.10 1 89 2.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.8E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 SUPERFAMILY SSF53850 93 298 6.52E-37 T 28-03-2018 AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 Gene3D G3DSA:3.40.190.10 180 268 3.7E-19 T 28-03-2018 AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 Pfam PF03466 LysR substrate binding domain 92 294 1.3E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS07145 2d3de6d85d07cc24fba966bd14589850 305 Gene3D G3DSA:3.40.190.10 93 179 4.4E-17 T 28-03-2018 AL504_RS11010 c67298afa59b45a26c5f43c79d40f4d6 262 Pfam PF01738 Dienelactone hydrolase family 36 262 7.2E-64 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL504_RS11010 c67298afa59b45a26c5f43c79d40f4d6 262 SUPERFAMILY SSF53474 26 262 2.42E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS11010 c67298afa59b45a26c5f43c79d40f4d6 262 Gene3D G3DSA:3.40.50.1820 19 261 1.9E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 Pfam PF00175 Oxidoreductase NAD-binding domain 113 228 5.0E-7 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 Gene3D G3DSA:2.40.30.10 2 96 3.3E-16 T 28-03-2018 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 SUPERFAMILY SSF52343 102 256 3.8E-40 T 28-03-2018 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 Gene3D G3DSA:3.40.50.80 97 258 5.4E-20 T 28-03-2018 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 SUPERFAMILY SSF63380 6 99 4.6E-25 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.0E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.0E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.0E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.0E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL504_RS04755 ef73317a0492294692a8dcd004ceb3fc 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 1.4E-8 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL504_RS06535 d300bda95eda11fe636627ecde954168 329 Gene3D G3DSA:3.30.1330.60 113 301 3.9E-37 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS06535 d300bda95eda11fe636627ecde954168 329 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 65 5.1E-19 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain AL504_RS06535 d300bda95eda11fe636627ecde954168 329 Pfam PF00691 OmpA family 166 254 3.7E-11 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS06535 d300bda95eda11fe636627ecde954168 329 SUPERFAMILY SSF103088 159 270 1.83E-19 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS27810 70d9a45d60f9ba376bf582aa55f514e2 182 SUPERFAMILY SSF53597 2 180 1.83E-35 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS27810 70d9a45d60f9ba376bf582aa55f514e2 182 Pfam PF01872 RibD C-terminal domain 6 163 7.8E-15 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL504_RS27810 70d9a45d60f9ba376bf582aa55f514e2 182 Gene3D G3DSA:3.40.430.10 4 179 5.2E-35 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL504_RS24785 96fd8db4ec66138f790575266c981332 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 162 4.2E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24785 96fd8db4ec66138f790575266c981332 169 Gene3D G3DSA:1.10.1740.10 7 75 1.4E-13 T 28-03-2018 AL504_RS24785 96fd8db4ec66138f790575266c981332 169 SUPERFAMILY SSF88659 105 165 4.86E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24785 96fd8db4ec66138f790575266c981332 169 Pfam PF08281 Sigma-70, region 4 115 163 2.0E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24785 96fd8db4ec66138f790575266c981332 169 Gene3D G3DSA:1.10.10.10 76 167 4.1E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24785 96fd8db4ec66138f790575266c981332 169 SUPERFAMILY SSF88946 13 97 2.47E-12 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24785 96fd8db4ec66138f790575266c981332 169 Pfam PF04542 Sigma-70 region 2 16 79 1.5E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS13385 c1d9f161491cf5a1112848b87748552b 120 PRINTS PR00605 Class IC cytochrome C signature 35 46 1.5E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL504_RS13385 c1d9f161491cf5a1112848b87748552b 120 PRINTS PR00605 Class IC cytochrome C signature 87 109 1.5E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL504_RS13385 c1d9f161491cf5a1112848b87748552b 120 SUPERFAMILY SSF46626 5 113 8.48E-24 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS13385 c1d9f161491cf5a1112848b87748552b 120 Gene3D G3DSA:1.10.760.10 6 112 6.9E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS13385 c1d9f161491cf5a1112848b87748552b 120 Pfam PF00034 Cytochrome c 26 110 5.6E-14 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 772 928 1.3E-38 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 SUPERFAMILY SSF69255 440 534 2.62E-22 T 28-03-2018 AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 SUPERFAMILY SSF69279 259 358 1.87E-9 T 28-03-2018 AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 SUPERFAMILY SSF69279 411 429 1.87E-9 T 28-03-2018 AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 Gene3D G3DSA:3.55.50.10 105 204 1.4E-20 T 28-03-2018 AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 Gene3D G3DSA:2.40.50.260 440 564 1.1E-24 T 28-03-2018 AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 SUPERFAMILY SSF69279 18 187 8.5E-38 T 28-03-2018 AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 604 709 9.1E-31 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AL504_RS01855 f23608eb00764e1033f111e0090a0b57 958 Pfam PF05954 Phage late control gene D protein (GPD) 36 357 8.9E-65 T 28-03-2018 AL504_RS19885 d7c66687f731b6d620001b1fee377693 469 PIRSF PIRSF016636 1 469 1.8E-137 T 28-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AL504_RS19885 d7c66687f731b6d620001b1fee377693 469 PIRSF PIRSF500217 1 469 8.2E-142 T 28-03-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 AL504_RS19885 d7c66687f731b6d620001b1fee377693 469 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 91 345 1.1E-17 T 28-03-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT AL504_RS26200 6940ba30aa8a9bf1459dd007043c65ee 162 Gene3D G3DSA:3.90.960.10 1 161 8.7E-38 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS26200 6940ba30aa8a9bf1459dd007043c65ee 162 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 155 1.5E-48 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL504_RS26200 6940ba30aa8a9bf1459dd007043c65ee 162 SUPERFAMILY SSF55826 10 159 1.44E-43 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS26200 6940ba30aa8a9bf1459dd007043c65ee 162 Pfam PF04073 Aminoacyl-tRNA editing domain 37 150 1.6E-26 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS26200 6940ba30aa8a9bf1459dd007043c65ee 162 PIRSF PIRSF006181 5 162 5.9E-48 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL504_RS29070 ebfd43faf7d7a3b108ea2e7fa5c4bacb 515 Gene3D G3DSA:3.40.50.2000 246 473 8.2E-37 T 28-03-2018 AL504_RS29070 ebfd43faf7d7a3b108ea2e7fa5c4bacb 515 Gene3D G3DSA:3.40.50.2000 6 245 8.6E-15 T 28-03-2018 AL504_RS29070 ebfd43faf7d7a3b108ea2e7fa5c4bacb 515 Pfam PF00534 Glycosyl transferases group 1 286 447 6.3E-13 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS29070 ebfd43faf7d7a3b108ea2e7fa5c4bacb 515 Pfam PF08323 Starch synthase catalytic domain 1 232 1.2E-65 T 28-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL504_RS29070 ebfd43faf7d7a3b108ea2e7fa5c4bacb 515 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 2.7E-146 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL504_RS29070 ebfd43faf7d7a3b108ea2e7fa5c4bacb 515 SUPERFAMILY SSF53756 2 480 2.9E-99 T 28-03-2018 AL504_RS29070 ebfd43faf7d7a3b108ea2e7fa5c4bacb 515 Hamap MF_00484 Glycogen synthase [glgA]. 1 477 35.695 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL504_RS02425 d8bea09910eabcfe579531c0967cc448 130 Gene3D G3DSA:3.10.450.50 4 128 3.1E-28 T 28-03-2018 AL504_RS02425 d8bea09910eabcfe579531c0967cc448 130 SUPERFAMILY SSF54427 8 125 4.59E-30 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS02425 d8bea09910eabcfe579531c0967cc448 130 Pfam PF12680 SnoaL-like domain 12 114 3.6E-23 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 Gene3D G3DSA:3.20.20.70 2 338 2.7E-148 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 PIRSF PIRSF001415 4 337 1.0E-145 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 2.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 2.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 2.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 2.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 2.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 2.8E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 SUPERFAMILY SSF51569 7 336 5.27E-143 T 28-03-2018 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 SMART SM01004 10 334 2.8E-237 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS20060 e7c4718d6e845a89d30b02367812dbe6 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 332 8.1E-137 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL504_RS02890 088a17cf3a36ba849dc93a37cd26de69 360 Gene3D G3DSA:3.40.50.1980 156 334 2.1E-30 T 28-03-2018 AL504_RS02890 088a17cf3a36ba849dc93a37cd26de69 360 Pfam PF01497 Periplasmic binding protein 47 300 3.1E-18 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS02890 088a17cf3a36ba849dc93a37cd26de69 360 Gene3D G3DSA:3.40.50.1980 9 155 1.9E-18 T 28-03-2018 AL504_RS02890 088a17cf3a36ba849dc93a37cd26de69 360 SUPERFAMILY SSF53807 16 329 1.61E-38 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 Gene3D G3DSA:3.50.50.60 1 162 1.2E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 Gene3D G3DSA:3.50.50.60 173 352 1.9E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 454 2.5E-32 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 9.1E-66 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.9E-35 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.9E-35 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 1.9E-35 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-35 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.9E-35 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 322 7.3E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 PIRSF PIRSF000350 1 463 8.1E-68 T 28-03-2018 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 464 1.3E-150 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 Gene3D G3DSA:3.30.390.30 353 465 1.5E-36 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 SUPERFAMILY SSF51905 2 331 7.23E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS21920 91513ff8d85d3d03120086189fcf1c0c 465 SUPERFAMILY SSF55424 342 464 2.92E-36 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL504_RS26910 d86c25f538d29c3b2d6b0300c61b09c4 78 SUPERFAMILY SSF143800 1 77 1.77E-33 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS26910 d86c25f538d29c3b2d6b0300c61b09c4 78 Gene3D G3DSA:2.30.170.40 2 75 1.4E-33 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS26910 d86c25f538d29c3b2d6b0300c61b09c4 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.9E-31 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS26910 d86c25f538d29c3b2d6b0300c61b09c4 78 Pfam PF00830 Ribosomal L28 family 3 62 9.5E-31 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS26910 d86c25f538d29c3b2d6b0300c61b09c4 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 23.245 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS05580 1a9c1b82642496aed62bac439bdd746a 157 Gene3D G3DSA:1.10.10.10 4 157 1.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05580 1a9c1b82642496aed62bac439bdd746a 157 Pfam PF12802 MarR family 35 94 1.2E-10 T 28-03-2018 AL504_RS05580 1a9c1b82642496aed62bac439bdd746a 157 SMART SM00347 29 130 3.0E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS05580 1a9c1b82642496aed62bac439bdd746a 157 SUPERFAMILY SSF46785 7 145 2.77E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05580 1a9c1b82642496aed62bac439bdd746a 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 5.3E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS05580 1a9c1b82642496aed62bac439bdd746a 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 5.3E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS05580 1a9c1b82642496aed62bac439bdd746a 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 5.3E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS06055 171c72ed54c5aff048dea6e7c5e0bac2 144 Gene3D G3DSA:3.30.530.20 1 144 1.1E-33 T 28-03-2018 IPR023393 START-like domain AL504_RS06055 171c72ed54c5aff048dea6e7c5e0bac2 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 1.5E-34 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AL504_RS06055 171c72ed54c5aff048dea6e7c5e0bac2 144 SUPERFAMILY SSF55961 1 143 1.75E-37 T 28-03-2018 AL504_RS29680 d5c6f582e85e463ab581bb611a377fe6 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 9.8E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS29680 d5c6f582e85e463ab581bb611a377fe6 195 Gene3D G3DSA:1.10.10.60 6 53 1.3E-12 T 28-03-2018 AL504_RS29680 d5c6f582e85e463ab581bb611a377fe6 195 Gene3D G3DSA:1.10.357.10 54 192 1.6E-20 T 28-03-2018 AL504_RS29680 d5c6f582e85e463ab581bb611a377fe6 195 SUPERFAMILY SSF46689 8 83 1.15E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS29680 d5c6f582e85e463ab581bb611a377fe6 195 SUPERFAMILY SSF48498 78 191 3.15E-24 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS05640 54079ecc2385c229b032aed02f1a4b3d 232 PIRSF PIRSF037290 1 229 9.2E-80 T 28-03-2018 IPR017166 Uncharacterised conserved protein UCP037290 AL504_RS05640 54079ecc2385c229b032aed02f1a4b3d 232 SUPERFAMILY SSF52540 44 157 1.27E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05640 54079ecc2385c229b032aed02f1a4b3d 232 Gene3D G3DSA:3.40.50.300 43 158 2.5E-28 T 28-03-2018 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PIRSF PIRSF002560 1 157 1.9E-73 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 SUPERFAMILY SSF47240 1 154 4.28E-54 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 Pfam PF00210 Ferritin-like domain 9 143 2.3E-39 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.5E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.5E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.5E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.5E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.5E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.5E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.5E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 Gene3D G3DSA:1.20.1260.10 1 78 2.7E-16 T 28-03-2018 IPR012347 Ferritin-related AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 Gene3D G3DSA:1.20.5.420 85 138 1.3E-22 T 28-03-2018 AL504_RS18500 bbe9a726a33ebec863c4015a82b0f5c9 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 8.5E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL504_RS17600 b72339ecb22de8cf36e1e718d60c7ff3 369 SUPERFAMILY SSF52540 24 160 6.96E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17600 b72339ecb22de8cf36e1e718d60c7ff3 369 Gene3D G3DSA:3.40.50.300 77 240 5.0E-9 T 28-03-2018 AL504_RS17600 b72339ecb22de8cf36e1e718d60c7ff3 369 Gene3D G3DSA:3.40.50.300 5 76 1.1E-11 T 28-03-2018 AL504_RS17600 b72339ecb22de8cf36e1e718d60c7ff3 369 Pfam PF05128 Domain of unknown function (DUF697) 221 366 1.5E-8 T 28-03-2018 IPR021147 Protein of unknown function DUF697 AL504_RS17600 b72339ecb22de8cf36e1e718d60c7ff3 369 Pfam PF01926 50S ribosome-binding GTPase 31 151 1.8E-11 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS16795 c2c9dcbbd1a3ac09353ebe63ab1bd83e 289 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 13 284 20.651 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL504_RS16795 c2c9dcbbd1a3ac09353ebe63ab1bd83e 289 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 23 277 2.3E-54 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL504_RS16795 c2c9dcbbd1a3ac09353ebe63ab1bd83e 289 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 222 232 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AL504_RS16795 c2c9dcbbd1a3ac09353ebe63ab1bd83e 289 Pfam PF01256 Carbohydrate kinase 36 263 5.9E-46 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL504_RS16795 c2c9dcbbd1a3ac09353ebe63ab1bd83e 289 SUPERFAMILY SSF53613 15 281 4.0E-62 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS16795 c2c9dcbbd1a3ac09353ebe63ab1bd83e 289 Gene3D G3DSA:3.40.1190.20 16 283 2.8E-46 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS01515 07506278bcfd4d1c57592dbec14634cd 293 SUPERFAMILY SSF46785 5 86 1.98E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01515 07506278bcfd4d1c57592dbec14634cd 293 Gene3D G3DSA:3.40.190.10 174 262 7.7E-26 T 28-03-2018 AL504_RS01515 07506278bcfd4d1c57592dbec14634cd 293 SUPERFAMILY SSF53850 90 291 3.8E-44 T 28-03-2018 AL504_RS01515 07506278bcfd4d1c57592dbec14634cd 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01515 07506278bcfd4d1c57592dbec14634cd 293 Gene3D G3DSA:1.10.10.10 3 84 9.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01515 07506278bcfd4d1c57592dbec14634cd 293 Pfam PF03466 LysR substrate binding domain 88 291 5.5E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01515 07506278bcfd4d1c57592dbec14634cd 293 Gene3D G3DSA:3.40.190.10 88 173 3.7E-12 T 28-03-2018 AL504_RS12690 28fd258d48e823c286943f9f55740025 256 SMART SM00346 1 90 4.0E-10 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS12690 28fd258d48e823c286943f9f55740025 256 Pfam PF09339 IclR helix-turn-helix domain 4 50 1.1E-6 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS12690 28fd258d48e823c286943f9f55740025 256 Pfam PF01614 Bacterial transcriptional regulator 124 241 5.7E-14 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS12690 28fd258d48e823c286943f9f55740025 256 SUPERFAMILY SSF46785 1 72 7.12E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12690 28fd258d48e823c286943f9f55740025 256 Gene3D G3DSA:3.30.450.40 74 252 2.8E-33 T 28-03-2018 IPR029016 GAF domain-like AL504_RS12690 28fd258d48e823c286943f9f55740025 256 SUPERFAMILY SSF55781 58 242 4.58E-32 T 28-03-2018 IPR029016 GAF domain-like AL504_RS12690 28fd258d48e823c286943f9f55740025 256 Gene3D G3DSA:1.10.10.10 1 70 2.6E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 278 365 1.7E-16 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 Gene3D G3DSA:2.60.410.10 278 366 9.0E-17 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 Gene3D G3DSA:3.40.710.10 13 277 1.3E-51 T 28-03-2018 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 SUPERFAMILY SSF69189 278 368 4.32E-19 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 SMART SM00936 278 366 1.0E-22 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 SUPERFAMILY SSF56601 3 278 4.81E-78 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 257 9.2E-75 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 4.0E-19 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 4.0E-19 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS26870 a9ee815e671059aef04b16293a664df0 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 4.0E-19 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS19725 3612a28e6ac3e1c25461f40a0c6c205a 109 Gene3D G3DSA:3.90.470.10 1 109 3.2E-39 T 28-03-2018 AL504_RS19725 3612a28e6ac3e1c25461f40a0c6c205a 109 SUPERFAMILY SSF54843 1 107 5.49E-39 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL504_RS19725 3612a28e6ac3e1c25461f40a0c6c205a 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19725 3612a28e6ac3e1c25461f40a0c6c205a 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.4E-43 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19725 3612a28e6ac3e1c25461f40a0c6c205a 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 23.892 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19725 3612a28e6ac3e1c25461f40a0c6c205a 109 Pfam PF00237 Ribosomal protein L22p/L17e 7 107 9.1E-35 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL504_RS09520 3d91cf6e176e3d9c684b481df731ebd8 220 Pfam PF02586 SOS response associated peptidase (SRAP) 1 218 9.4E-29 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AL504_RS09520 3d91cf6e176e3d9c684b481df731ebd8 220 Gene3D G3DSA:3.90.1680.10 1 220 1.2E-41 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AL504_RS09520 3d91cf6e176e3d9c684b481df731ebd8 220 SUPERFAMILY SSF143081 2 218 8.89E-54 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.0E-250 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 SUPERFAMILY SSF56235 2 238 6.86E-73 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 Pfam PF01380 SIS domain 292 417 9.5E-27 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 Pfam PF01380 SIS domain 464 590 1.0E-25 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 39.161 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 Gene3D G3DSA:3.40.50.10490 460 608 5.1E-49 T 28-03-2018 AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 Gene3D G3DSA:3.60.20.10 2 242 3.5E-67 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 Gene3D G3DSA:3.40.50.10490 243 459 1.2E-59 T 28-03-2018 AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 SUPERFAMILY SSF53697 248 610 1.48E-109 T 28-03-2018 AL504_RS17720 b016e0b316c69e365627f5ed0eb3e3d8 610 Pfam PF13522 Glutamine amidotransferase domain 56 195 2.7E-22 T 28-03-2018 AL504_RS13260 f3180242ad84dab886a6c4573511e566 333 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS13260 f3180242ad84dab886a6c4573511e566 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 2.2E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13260 f3180242ad84dab886a6c4573511e566 333 SMART SM00382 47 238 5.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13260 f3180242ad84dab886a6c4573511e566 333 Pfam PF00005 ABC transporter 39 188 1.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS13260 f3180242ad84dab886a6c4573511e566 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 323 5.0E-24 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13260 f3180242ad84dab886a6c4573511e566 333 SUPERFAMILY SSF52540 47 311 1.38E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13260 f3180242ad84dab886a6c4573511e566 333 Gene3D G3DSA:3.40.50.300 11 330 6.8E-86 T 28-03-2018 AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 Gene3D G3DSA:3.40.50.720 1 48 9.0E-9 T 28-03-2018 AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 Gene3D G3DSA:3.40.50.720 49 256 5.2E-61 T 28-03-2018 AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 SUPERFAMILY SSF51735 6 252 4.23E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.6E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.6E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS22540 846611a9aa6f2a3c602701d1f0b60883 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 9.0E-59 T 28-03-2018 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 Pfam PF00199 Catalase 124 508 9.5E-179 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 ProSitePatterns PS00438 Catalase proximal active site signature. 160 176 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 PRINTS PR00067 Catalase signature 409 436 7.0E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 PRINTS PR00067 Catalase signature 200 218 7.0E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 PRINTS PR00067 Catalase signature 441 467 7.0E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 PRINTS PR00067 Catalase signature 221 238 7.0E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 PRINTS PR00067 Catalase signature 240 258 7.0E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 PRINTS PR00067 Catalase signature 137 160 7.0E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 PIRSF PIRSF038927 89 792 0.0 T 28-03-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 SUPERFAMILY SSF56634 106 619 4.45E-218 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 SUPERFAMILY SSF52317 640 752 3.41E-20 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 Gene3D G3DSA:2.40.180.10 102 479 1.6E-164 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 Gene3D G3DSA:3.40.50.880 638 790 9.6E-26 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 Pfam PF06628 Catalase-related immune-responsive 538 601 1.7E-18 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 SMART SM01060 124 512 2.0E-275 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL504_RS29260 1fe3ef5cde622e02452f8930a475592e 793 Pfam PF01965 DJ-1/PfpI family 641 752 4.4E-12 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS16975 d80dc519560822ef895e3f6d774d0856 234 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 8 213 3.6E-83 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AL504_RS16975 d80dc519560822ef895e3f6d774d0856 234 Pfam PF01144 Coenzyme A transferase 10 205 2.2E-31 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS16975 d80dc519560822ef895e3f6d774d0856 234 SUPERFAMILY SSF100950 8 218 8.84E-58 T 28-03-2018 AL504_RS16975 d80dc519560822ef895e3f6d774d0856 234 Gene3D G3DSA:3.40.1080.10 7 217 1.5E-53 T 28-03-2018 AL504_RS16975 d80dc519560822ef895e3f6d774d0856 234 SMART SM00882 10 207 2.4E-57 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS20285 60f065d64f6070b2d35aabfd8d7e6b05 298 Gene3D G3DSA:3.90.25.10 158 200 3.2E-6 T 28-03-2018 AL504_RS20285 60f065d64f6070b2d35aabfd8d7e6b05 298 Gene3D G3DSA:3.40.50.720 1 157 1.4E-13 T 28-03-2018 AL504_RS20285 60f065d64f6070b2d35aabfd8d7e6b05 298 Gene3D G3DSA:3.90.25.10 201 271 5.1E-19 T 28-03-2018 AL504_RS20285 60f065d64f6070b2d35aabfd8d7e6b05 298 Pfam PF04321 RmlD substrate binding domain 1 291 4.5E-99 T 28-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL504_RS20285 60f065d64f6070b2d35aabfd8d7e6b05 298 SUPERFAMILY SSF51735 1 292 9.09E-89 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20285 60f065d64f6070b2d35aabfd8d7e6b05 298 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 290 8.8E-95 T 28-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 Pfam PF03466 LysR substrate binding domain 94 291 1.6E-12 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 3 294 6.3E-116 T 28-03-2018 IPR017685 HTH-type transcriptional regulator ArgP AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 Gene3D G3DSA:1.10.10.10 1 87 1.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 Gene3D G3DSA:3.40.190.10 181 263 8.7E-5 T 28-03-2018 AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 Gene3D G3DSA:3.40.190.10 94 180 8.2E-40 T 28-03-2018 AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 SUPERFAMILY SSF46785 3 109 3.37E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.1E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS20940 f4e6fcae4e166158bff1f681bbb5e7d0 299 SUPERFAMILY SSF53850 91 293 5.07E-20 T 28-03-2018 AL504_RS16650 9c185db74ec0e6f38a50ee44a8da980a 302 SUPERFAMILY SSF53474 8 281 1.74E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16650 9c185db74ec0e6f38a50ee44a8da980a 302 Gene3D G3DSA:3.40.50.1820 2 287 7.0E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16650 9c185db74ec0e6f38a50ee44a8da980a 302 Pfam PF12146 Serine aminopeptidase, S33 38 264 2.2E-58 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 258 2.7E-66 T 28-03-2018 AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 Gene3D G3DSA:3.40.50.720 57 264 1.9E-63 T 28-03-2018 AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 Gene3D G3DSA:3.40.50.720 1 56 3.2E-7 T 28-03-2018 AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 9.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 9.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 9.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 9.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 9.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 SUPERFAMILY SSF51735 6 260 3.1E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS05620 a52b8e7f1995d7acf350dbd1b49b445f 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS10910 837b534a1bd820c179a05be88806a3f7 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL504_RS10910 837b534a1bd820c179a05be88806a3f7 303 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 92 108 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL504_RS10910 837b534a1bd820c179a05be88806a3f7 303 Gene3D G3DSA:1.10.600.10 1 303 4.6E-84 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS10910 837b534a1bd820c179a05be88806a3f7 303 Pfam PF00348 Polyprenyl synthetase 36 267 9.6E-53 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL504_RS10910 837b534a1bd820c179a05be88806a3f7 303 SUPERFAMILY SSF48576 8 294 1.98E-82 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS21100 296c9749610c25184436858df18fe3f1 477 Gene3D G3DSA:3.90.1150.10 348 472 1.2E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS21100 296c9749610c25184436858df18fe3f1 477 SUPERFAMILY SSF53383 96 467 2.79E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS21100 296c9749610c25184436858df18fe3f1 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.5E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21100 296c9749610c25184436858df18fe3f1 477 Gene3D G3DSA:3.40.640.10 122 347 3.8E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS21100 296c9749610c25184436858df18fe3f1 477 Pfam PF00155 Aminotransferase class I and II 148 449 6.7E-34 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS21100 296c9749610c25184436858df18fe3f1 477 SUPERFAMILY SSF46785 2 70 1.25E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21100 296c9749610c25184436858df18fe3f1 477 Gene3D G3DSA:1.10.10.10 1 68 1.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21100 296c9749610c25184436858df18fe3f1 477 SMART SM00345 7 66 3.6E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS31165 465faba02346f61c3b47091f76e811b7 131 Gene3D G3DSA:3.30.1330.40 2 130 1.5E-36 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS31165 465faba02346f61c3b47091f76e811b7 131 SUPERFAMILY SSF55298 3 129 8.64E-37 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS31165 465faba02346f61c3b47091f76e811b7 131 Pfam PF01042 Endoribonuclease L-PSP 9 128 7.5E-30 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS31165 465faba02346f61c3b47091f76e811b7 131 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 28-03-2018 IPR019897 RidA, conserved site AL504_RS18255 c573e9d4f4a16c5e2ae79b5c13255177 266 Gene3D G3DSA:3.90.226.10 11 223 8.5E-68 T 28-03-2018 AL504_RS18255 c573e9d4f4a16c5e2ae79b5c13255177 266 SUPERFAMILY SSF52096 5 265 2.68E-80 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS18255 c573e9d4f4a16c5e2ae79b5c13255177 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 266 1.5E-59 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS18255 c573e9d4f4a16c5e2ae79b5c13255177 266 Gene3D G3DSA:1.10.12.10 224 266 2.4E-14 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS29425 0afcbe57f931ae89578d7f88cd0da015 253 PIRSF PIRSF006648 4 253 5.1E-29 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS29425 0afcbe57f931ae89578d7f88cd0da015 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 3.7E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS29425 0afcbe57f931ae89578d7f88cd0da015 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 3.7E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS29425 0afcbe57f931ae89578d7f88cd0da015 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 3.7E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS29425 0afcbe57f931ae89578d7f88cd0da015 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 3.7E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS29425 0afcbe57f931ae89578d7f88cd0da015 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 3.7E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS29425 0afcbe57f931ae89578d7f88cd0da015 253 Pfam PF01061 ABC-2 type transporter 5 216 6.2E-35 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL504_RS06795 a5e44bd28e0548936da5e4588ffd80f4 651 Pfam PF05787 Bacterial protein of unknown function (DUF839) 203 559 8.5E-20 T 28-03-2018 IPR008557 Protein of unknown function DUF839 AL504_RS06795 a5e44bd28e0548936da5e4588ffd80f4 651 Gene3D G3DSA:3.40.190.10 21 617 1.8E-4 T 28-03-2018 AL504_RS14365 eb7718239c77ae9066a6b62ddcc56ab6 327 Pfam PF01863 Protein of unknown function DUF45 105 319 4.4E-60 T 28-03-2018 IPR002725 Protein of unknown function DUF45 AL504_RS21035 f56459708a991e88ed17a6afab907eff 248 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 29 211 8.6E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS21035 f56459708a991e88ed17a6afab907eff 248 Pfam PF13419 Haloacid dehalogenase-like hydrolase 30 211 1.4E-10 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21035 f56459708a991e88ed17a6afab907eff 248 Gene3D G3DSA:3.40.50.1000 13 226 1.4E-24 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21035 f56459708a991e88ed17a6afab907eff 248 SUPERFAMILY SSF56784 27 239 7.82E-32 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21035 f56459708a991e88ed17a6afab907eff 248 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 28 210 1.1E-45 T 28-03-2018 IPR010237 Pyrimidine 5-nucleotidase AL504_RS15495 b7fb1f0e9e17fd69b10e0e1522cf30d1 126 Gene3D G3DSA:3.30.429.10 1 126 5.5E-30 T 28-03-2018 AL504_RS15495 b7fb1f0e9e17fd69b10e0e1522cf30d1 126 Pfam PF14552 Tautomerase enzyme 38 119 6.5E-32 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AL504_RS15495 b7fb1f0e9e17fd69b10e0e1522cf30d1 126 SUPERFAMILY SSF55331 2 125 2.92E-42 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL504_RS01510 be283468a6a0e9c2fd1b65117aeba50e 509 Gene3D G3DSA:1.20.1250.20 9 201 3.4E-26 T 28-03-2018 AL504_RS01510 be283468a6a0e9c2fd1b65117aeba50e 509 Gene3D G3DSA:1.20.1250.20 253 506 9.3E-15 T 28-03-2018 AL504_RS01510 be283468a6a0e9c2fd1b65117aeba50e 509 SUPERFAMILY SSF103473 250 419 1.07E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01510 be283468a6a0e9c2fd1b65117aeba50e 509 SUPERFAMILY SSF103473 469 501 1.07E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01510 be283468a6a0e9c2fd1b65117aeba50e 509 SUPERFAMILY SSF103473 11 204 1.07E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01510 be283468a6a0e9c2fd1b65117aeba50e 509 Pfam PF07690 Major Facilitator Superfamily 20 403 6.0E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS04845 995bfd68166105e517de6cbd8ba5f774 454 SUPERFAMILY SSF103378 7 450 1.31E-120 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 AL504_RS04845 995bfd68166105e517de6cbd8ba5f774 454 Pfam PF03972 MmgE/PrpD family 11 443 3.8E-132 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 AL504_RS04845 995bfd68166105e517de6cbd8ba5f774 454 Gene3D G3DSA:1.10.4100.10 1 313 5.8E-97 T 28-03-2018 AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 Gene3D G3DSA:1.20.120.530 68 216 3.2E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 Pfam PF07729 FCD domain 82 197 1.2E-16 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 SUPERFAMILY SSF46785 5 76 1.96E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 SMART SM00895 82 205 2.2E-10 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 SMART SM00345 14 72 1.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 3.0E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 Gene3D G3DSA:1.10.10.10 1 67 5.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15125 a5c6b7ed749062ae054d2a90123bd8ca 216 SUPERFAMILY SSF48008 79 207 9.94E-15 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS03320 b4c6fbdc72e25a6afadb5f0244fa6519 201 Gene3D G3DSA:3.40.630.30 13 193 2.7E-20 T 28-03-2018 AL504_RS03320 b4c6fbdc72e25a6afadb5f0244fa6519 201 SUPERFAMILY SSF55729 20 189 3.54E-43 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS03320 b4c6fbdc72e25a6afadb5f0244fa6519 201 SMART SM01006 29 76 1.4E-12 T 28-03-2018 IPR019432 Siderophore biosynthesis protein, conserved domain AL504_RS03320 b4c6fbdc72e25a6afadb5f0244fa6519 201 Pfam PF13523 Acetyltransferase (GNAT) domain 32 175 2.5E-46 T 28-03-2018 AL504_RS01620 d10af1e7eb5fcb5d27ae71bf99cad395 277 Gene3D G3DSA:3.40.50.1820 12 272 2.2E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS01620 d10af1e7eb5fcb5d27ae71bf99cad395 277 Pfam PF00561 alpha/beta hydrolase fold 38 261 3.8E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS01620 d10af1e7eb5fcb5d27ae71bf99cad395 277 SUPERFAMILY SSF53474 14 274 1.05E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 1770 1865 1.2E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 3025 3105 0.047 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 1053 1170 0.3 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 1297 1404 1.2E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 1171 1296 2.6E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 2337 2432 0.018 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 944 1052 8.7E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 1408 1527 5.9E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 2433 2537 2.7E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 2669 2756 9.2E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 3236 3330 1.4E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:3.90.182.10 3352 3533 7.1E-7 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:3.90.182.10 3545 3831 4.0E-9 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 2234 2336 1.1E-5 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 1630 1766 2.3E-6 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 2876 2991 1.6E-5 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 2122 2233 1.0E-4 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 652 801 2.4E-7 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 1994 2121 8.3E-8 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 1528 1629 0.012 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 2757 2875 5.2E-6 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 330 434 0.37 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 2544 2668 0.2 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 1866 1993 8.3E-6 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.1310 802 943 0.33 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.650 456 564 8.1E-4 T 28-03-2018 AL504_RS14575 5a34ba7c49bce19045900cc844a61232 3918 Gene3D G3DSA:2.60.40.10 585 651 2.9E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS02960 42f88a989a76923eb48a4f41a677bb60 279 SUPERFAMILY SSF53850 36 257 2.48E-40 T 28-03-2018 AL504_RS02960 42f88a989a76923eb48a4f41a677bb60 279 SMART SM00062 40 262 5.0E-28 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS02960 42f88a989a76923eb48a4f41a677bb60 279 Gene3D G3DSA:3.40.190.10 30 136 5.9E-21 T 28-03-2018 AL504_RS02960 42f88a989a76923eb48a4f41a677bb60 279 Gene3D G3DSA:3.40.190.10 137 262 9.1E-17 T 28-03-2018 AL504_RS02960 42f88a989a76923eb48a4f41a677bb60 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 252 1.6E-32 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS12820 316aabd4aa8f9404b93b50ed570de7d3 232 Gene3D G3DSA:1.10.10.10 125 225 3.1E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12820 316aabd4aa8f9404b93b50ed570de7d3 232 Pfam PF00072 Response regulator receiver domain 3 111 5.1E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS12820 316aabd4aa8f9404b93b50ed570de7d3 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.7E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS12820 316aabd4aa8f9404b93b50ed570de7d3 232 SMART SM00448 1 112 1.2E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS12820 316aabd4aa8f9404b93b50ed570de7d3 232 SMART SM00862 145 218 2.4E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS12820 316aabd4aa8f9404b93b50ed570de7d3 232 Gene3D G3DSA:3.40.50.2300 1 124 1.3E-34 T 28-03-2018 AL504_RS12820 316aabd4aa8f9404b93b50ed570de7d3 232 SUPERFAMILY SSF52172 1 166 1.85E-39 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 262 8.7E-89 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 122 4.5E-37 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 Gene3D G3DSA:3.40.50.720 1 119 3.7E-29 T 28-03-2018 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 SUPERFAMILY SSF55347 124 233 2.4E-35 T 28-03-2018 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 Gene3D G3DSA:3.30.360.10 123 231 3.3E-31 T 28-03-2018 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 PIRSF PIRSF000161 1 263 1.3E-84 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 SUPERFAMILY SSF51735 1 123 8.85E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 SUPERFAMILY SSF51735 233 263 8.85E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 147 164 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 262 33.814 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS13485 ace9db3cf26a6b8da55171939e55b1ff 263 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 125 261 6.0E-41 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL504_RS10330 9505e221927825045f8951e287f10c6a 328 SUPERFAMILY SSF88874 182 326 1.8E-11 T 28-03-2018 AL504_RS10330 9505e221927825045f8951e287f10c6a 328 Gene3D G3DSA:4.10.1070.10 228 321 3.2E-10 T 28-03-2018 AL504_RS10330 9505e221927825045f8951e287f10c6a 328 Gene3D G3DSA:3.90.1340.10 12 227 4.4E-7 T 28-03-2018 IPR011083 Phage tail collar domain AL504_RS15580 d4c324da5ac1ddbcf7de0f4d7db86684 369 Gene3D G3DSA:3.30.420.40 4 185 4.1E-55 T 28-03-2018 AL504_RS15580 d4c324da5ac1ddbcf7de0f4d7db86684 369 Gene3D G3DSA:3.30.420.40 213 369 8.4E-25 T 28-03-2018 AL504_RS15580 d4c324da5ac1ddbcf7de0f4d7db86684 369 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 369 3.8E-138 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AL504_RS15580 d4c324da5ac1ddbcf7de0f4d7db86684 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.107 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AL504_RS15580 d4c324da5ac1ddbcf7de0f4d7db86684 369 SUPERFAMILY SSF53067 143 340 2.59E-27 T 28-03-2018 AL504_RS15580 d4c324da5ac1ddbcf7de0f4d7db86684 369 SUPERFAMILY SSF53067 68 113 2.59E-27 T 28-03-2018 AL504_RS15580 d4c324da5ac1ddbcf7de0f4d7db86684 369 SUPERFAMILY SSF53067 7 41 2.59E-27 T 28-03-2018 AL504_RS15385 b39efe84f591328a0a720a210d9af452 427 Gene3D G3DSA:1.10.1660.10 213 425 0.017 T 28-03-2018 AL504_RS15385 b39efe84f591328a0a720a210d9af452 427 Pfam PF04888 Secretion system effector C (SseC) like family 87 420 2.8E-34 T 28-03-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 AL504_RS21535 135e75996fae02b490f33cb0a00c0c41 294 Gene3D G3DSA:3.90.25.10 172 292 8.4E-16 T 28-03-2018 AL504_RS21535 135e75996fae02b490f33cb0a00c0c41 294 Gene3D G3DSA:3.40.50.720 1 171 4.5E-20 T 28-03-2018 AL504_RS21535 135e75996fae02b490f33cb0a00c0c41 294 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 1.1E-15 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS21535 135e75996fae02b490f33cb0a00c0c41 294 SUPERFAMILY SSF51735 2 291 2.86E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21915 804a9f2f358fbaa40dfcf5327bcb8072 293 Pfam PF03466 LysR substrate binding domain 89 292 1.7E-42 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21915 804a9f2f358fbaa40dfcf5327bcb8072 293 Gene3D G3DSA:1.10.10.10 1 85 1.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21915 804a9f2f358fbaa40dfcf5327bcb8072 293 SUPERFAMILY SSF46785 2 113 1.49E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21915 804a9f2f358fbaa40dfcf5327bcb8072 293 SUPERFAMILY SSF53850 89 292 1.9E-40 T 28-03-2018 AL504_RS21915 804a9f2f358fbaa40dfcf5327bcb8072 293 Gene3D G3DSA:3.40.190.10 179 261 5.6E-23 T 28-03-2018 AL504_RS21915 804a9f2f358fbaa40dfcf5327bcb8072 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21915 804a9f2f358fbaa40dfcf5327bcb8072 293 Gene3D G3DSA:3.40.190.10 87 178 6.5E-21 T 28-03-2018 AL504_RS24500 803ca603093972ec47f192ceac0bc4e4 296 SUPERFAMILY SSF51735 1 285 1.22E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24500 803ca603093972ec47f192ceac0bc4e4 296 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 211 4.6E-13 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS24500 803ca603093972ec47f192ceac0bc4e4 296 Gene3D G3DSA:3.40.50.720 1 115 8.9E-19 T 28-03-2018 AL504_RS24500 803ca603093972ec47f192ceac0bc4e4 296 Gene3D G3DSA:3.90.25.10 154 296 2.0E-16 T 28-03-2018 AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 Gene3D G3DSA:3.40.50.720 56 261 1.2E-68 T 28-03-2018 AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 5.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 5.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 5.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 230 1.6E-4 T 28-03-2018 AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 257 2.7E-73 T 28-03-2018 AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 Gene3D G3DSA:3.40.50.10090 7 55 1.5E-14 T 28-03-2018 AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.1E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.1E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.1E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.1E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.1E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.1E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 SUPERFAMILY SSF51735 13 258 9.66E-89 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21940 ff2b59e9ef1b5459be65d4f1b13ff4bb 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS26795 e24c0c9d00001866a52c6824883540a6 314 PIRSF PIRSF000105 5 270 2.3E-67 T 28-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AL504_RS26795 e24c0c9d00001866a52c6824883540a6 314 SUPERFAMILY SSF51735 10 189 2.37E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS26795 e24c0c9d00001866a52c6824883540a6 314 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 13 188 1.8E-49 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS26795 e24c0c9d00001866a52c6824883540a6 314 Gene3D G3DSA:3.40.50.720 2 189 1.7E-47 T 28-03-2018 AL504_RS26795 e24c0c9d00001866a52c6824883540a6 314 SUPERFAMILY SSF48179 192 284 1.02E-12 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS26795 e24c0c9d00001866a52c6824883540a6 314 Gene3D G3DSA:1.10.1040.10 192 293 9.8E-17 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS26795 e24c0c9d00001866a52c6824883540a6 314 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 192 254 3.4E-12 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 Pfam PF05195 Aminopeptidase P, N-terminal domain 11 126 9.5E-34 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 SMART SM01011 6 141 1.1E-56 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 SUPERFAMILY SSF55920 180 445 1.83E-80 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 353 365 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 Gene3D G3DSA:3.40.350.10 7 176 4.6E-44 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 Pfam PF00557 Metallopeptidase family M24 186 424 2.1E-60 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 SUPERFAMILY SSF53092 6 179 6.54E-47 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL504_RS13705 889fdbaf2ea36ddcf0d4c5bd6dc086d6 447 Gene3D G3DSA:3.90.230.10 177 447 1.4E-80 T 28-03-2018 AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 PIRSF PIRSF000089 1 310 6.3E-103 T 28-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 SMART SM00893 3 182 1.5E-55 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 28-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 Gene3D G3DSA:3.40.50.1220 185 310 9.0E-57 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 SUPERFAMILY SSF52467 189 309 3.33E-44 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 Gene3D G3DSA:3.40.50.620 1 183 8.0E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 Pfam PF01012 Electron transfer flavoprotein domain 4 169 5.9E-37 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 SUPERFAMILY SSF52402 3 186 1.95E-54 T 28-03-2018 AL504_RS18310 65da39ec73a7dc4bf405b3984f7c15bf 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 5.1E-35 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AL504_RS06920 47709cff1985b273f47f9b4f8cce175c 331 PIRSF PIRSF018266 8 324 1.8E-81 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS06920 47709cff1985b273f47f9b4f8cce175c 331 Pfam PF16220 Domain of unknown function (DUF4880) 19 57 1.2E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS06920 47709cff1985b273f47f9b4f8cce175c 331 Pfam PF04773 FecR protein 121 209 5.2E-18 T 28-03-2018 IPR006860 FecR protein AL504_RS03645 6a86662710d3d775bb07b5c3c2e7e167 339 SUPERFAMILY SSF51430 11 324 8.64E-62 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS03645 6a86662710d3d775bb07b5c3c2e7e167 339 Pfam PF00248 Aldo/keto reductase family 12 324 3.2E-48 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS03645 6a86662710d3d775bb07b5c3c2e7e167 339 Gene3D G3DSA:3.20.20.100 4 327 1.5E-57 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS15865 42bc877f8f4336b8ccaf0a8d92a099f1 392 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 365 5.1E-64 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL504_RS15865 42bc877f8f4336b8ccaf0a8d92a099f1 392 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 368 1.1E-89 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AL504_RS09910 cbcd1bce6d6ba8840bdc01a273ab1feb 363 SUPERFAMILY SSF53756 5 355 1.67E-76 T 28-03-2018 AL504_RS09910 cbcd1bce6d6ba8840bdc01a273ab1feb 363 Gene3D G3DSA:3.40.50.2000 1 166 3.3E-18 T 28-03-2018 AL504_RS09910 cbcd1bce6d6ba8840bdc01a273ab1feb 363 Pfam PF13439 Glycosyltransferase Family 4 12 158 1.3E-13 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS09910 cbcd1bce6d6ba8840bdc01a273ab1feb 363 Gene3D G3DSA:3.40.50.2000 167 341 2.5E-48 T 28-03-2018 AL504_RS09910 cbcd1bce6d6ba8840bdc01a273ab1feb 363 Pfam PF00534 Glycosyl transferases group 1 168 334 2.7E-36 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 SUPERFAMILY SSF48256 10 436 6.02E-161 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 Gene3D G3DSA:1.10.580.10 33 302 2.9E-88 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 PRINTS PR00143 Citrate synthase signature 387 401 2.6E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 PRINTS PR00143 Citrate synthase signature 367 383 2.6E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 PRINTS PR00143 Citrate synthase signature 169 182 2.6E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 PRINTS PR00143 Citrate synthase signature 223 238 2.6E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 PRINTS PR00143 Citrate synthase signature 245 273 2.6E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 PRINTS PR00143 Citrate synthase signature 303 323 2.6E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 Pfam PF00285 Citrate synthase, C-terminal domain 50 419 4.7E-129 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 Gene3D G3DSA:1.10.580.10 346 412 1.5E-8 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 430 2.0E-234 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AL504_RS11745 0abeae56684de06f6a6d290bbb0513ee 436 PIRSF PIRSF001369 41 436 1.4E-161 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type AL504_RS18175 65da94829d3d4e2a018ff888f4563fe2 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 6.1E-35 T 28-03-2018 IPR007948 Protein of unknown function DUF736 AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 4.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 Pfam PF00106 short chain dehydrogenase 4 196 3.0E-62 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 188 0.0012 T 28-03-2018 AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 6.5E-118 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 SUPERFAMILY SSF51735 3 244 1.7E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 Gene3D G3DSA:3.40.50.720 1 46 2.9E-7 T 28-03-2018 AL504_RS11595 1e94b3b0e3fec3d7061839521c5ec2bd 245 Gene3D G3DSA:3.40.50.720 47 245 4.4E-63 T 28-03-2018 AL504_RS15040 f2d519ce648e820e054a447a97c98db7 299 SUPERFAMILY SSF103481 186 285 1.96E-11 T 28-03-2018 AL504_RS15040 f2d519ce648e820e054a447a97c98db7 299 SUPERFAMILY SSF103481 34 135 2.09E-12 T 28-03-2018 AL504_RS15040 f2d519ce648e820e054a447a97c98db7 299 Pfam PF00892 EamA-like transporter family 2 133 1.2E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS15040 f2d519ce648e820e054a447a97c98db7 299 Pfam PF00892 EamA-like transporter family 148 283 5.8E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS07310 2340a8a85984404a137cf77d62030bc6 535 Gene3D G3DSA:2.30.38.10 337 422 5.1E-15 T 28-03-2018 AL504_RS07310 2340a8a85984404a137cf77d62030bc6 535 SUPERFAMILY SSF56801 7 528 8.11E-104 T 28-03-2018 AL504_RS07310 2340a8a85984404a137cf77d62030bc6 535 Gene3D G3DSA:3.40.50.980 185 336 1.9E-24 T 28-03-2018 AL504_RS07310 2340a8a85984404a137cf77d62030bc6 535 Gene3D G3DSA:3.40.50.980 4 184 7.2E-35 T 28-03-2018 AL504_RS07310 2340a8a85984404a137cf77d62030bc6 535 Pfam PF00501 AMP-binding enzyme 15 413 4.3E-62 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS07310 2340a8a85984404a137cf77d62030bc6 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 438 510 7.9E-6 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS07310 2340a8a85984404a137cf77d62030bc6 535 Gene3D G3DSA:3.30.300.30 425 532 7.2E-17 T 28-03-2018 AL504_RS13990 b273666babf4a6e50f4da8baa156fd1c 259 Gene3D G3DSA:3.30.450.40 81 255 5.4E-45 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13990 b273666babf4a6e50f4da8baa156fd1c 259 SUPERFAMILY SSF55781 65 247 7.85E-45 T 28-03-2018 IPR029016 GAF domain-like AL504_RS13990 b273666babf4a6e50f4da8baa156fd1c 259 SMART SM00346 9 97 3.5E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS13990 b273666babf4a6e50f4da8baa156fd1c 259 Pfam PF01614 Bacterial transcriptional regulator 125 238 1.3E-24 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS13990 b273666babf4a6e50f4da8baa156fd1c 259 Gene3D G3DSA:1.10.10.10 13 80 9.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13990 b273666babf4a6e50f4da8baa156fd1c 259 SUPERFAMILY SSF46785 12 81 2.54E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13990 b273666babf4a6e50f4da8baa156fd1c 259 Pfam PF09339 IclR helix-turn-helix domain 14 59 4.9E-11 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS28100 fbcb0d18c8ff324fb3c9b22f89ac870f 214 Gene3D G3DSA:1.10.1670.10 157 211 4.1E-13 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL504_RS28100 fbcb0d18c8ff324fb3c9b22f89ac870f 214 SMART SM00478 55 208 5.6E-16 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS28100 fbcb0d18c8ff324fb3c9b22f89ac870f 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 177 1.4E-10 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS28100 fbcb0d18c8ff324fb3c9b22f89ac870f 214 Gene3D G3DSA:1.10.340.30 43 155 1.2E-24 T 28-03-2018 AL504_RS28100 fbcb0d18c8ff324fb3c9b22f89ac870f 214 SUPERFAMILY SSF48150 35 207 3.49E-43 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 Gene3D G3DSA:2.40.10.10 140 239 2.1E-37 T 28-03-2018 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 SUPERFAMILY SSF50156 368 435 3.02E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 Gene3D G3DSA:2.30.42.10 349 436 2.6E-12 T 28-03-2018 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 SUPERFAMILY SSF50156 200 326 2.99E-21 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 Pfam PF13365 Trypsin-like peptidase domain 68 203 6.6E-33 T 28-03-2018 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 PRINTS PR00834 HtrA/DegQ protease family signature 283 295 1.7E-51 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 PRINTS PR00834 HtrA/DegQ protease family signature 99 119 1.7E-51 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 1.7E-51 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 PRINTS PR00834 HtrA/DegQ protease family signature 78 90 1.7E-51 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 PRINTS PR00834 HtrA/DegQ protease family signature 139 163 1.7E-51 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 PRINTS PR00834 HtrA/DegQ protease family signature 174 191 1.7E-51 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 Gene3D G3DSA:2.40.10.10 32 139 3.6E-34 T 28-03-2018 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 Gene3D G3DSA:2.30.42.10 240 346 4.3E-25 T 28-03-2018 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 Pfam PF13180 PDZ domain 368 435 6.0E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 Pfam PF13180 PDZ domain 243 332 8.9E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 SMART SM00228 242 325 8.4E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 SMART SM00228 345 428 0.24 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS27455 f0b7afd9fb0fb963cabd6da4928efabd 436 SUPERFAMILY SSF50494 33 239 6.08E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL504_RS20380 44405829597e3e513d5b195ab04565de 355 Gene3D G3DSA:3.90.1210.10 294 355 4.4E-11 T 28-03-2018 AL504_RS20380 44405829597e3e513d5b195ab04565de 355 SUPERFAMILY SSF51269 296 353 6.44E-11 T 28-03-2018 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 AL504_RS20380 44405829597e3e513d5b195ab04565de 355 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 3 353 2.0E-137 T 28-03-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 AL504_RS20380 44405829597e3e513d5b195ab04565de 355 Gene3D G3DSA:3.20.20.70 1 290 3.7E-83 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS20380 44405829597e3e513d5b195ab04565de 355 SUPERFAMILY SSF51569 2 158 1.47E-73 T 28-03-2018 AL504_RS20380 44405829597e3e513d5b195ab04565de 355 SUPERFAMILY SSF51569 185 313 1.47E-73 T 28-03-2018 AL504_RS20380 44405829597e3e513d5b195ab04565de 355 Pfam PF03102 NeuB family 23 290 3.1E-93 T 28-03-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.94 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 Pfam PF01165 Ribosomal protein S21 4 57 7.6E-21 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 Gene3D G3DSA:1.20.5.1150 16 52 6.2E-17 T 28-03-2018 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.0E-23 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09075 6d383598a056f513052a39578b6d37ff 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 57 1.0E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS28400 1e423045acf7a23d60562b4753113281 248 SMART SM00421 163 220 5.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28400 1e423045acf7a23d60562b4753113281 248 Gene3D G3DSA:1.10.10.10 113 228 5.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28400 1e423045acf7a23d60562b4753113281 248 SUPERFAMILY SSF46894 160 224 3.4E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS28400 1e423045acf7a23d60562b4753113281 248 SUPERFAMILY SSF52172 2 128 7.16E-6 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28400 1e423045acf7a23d60562b4753113281 248 Pfam PF00196 Bacterial regulatory proteins, luxR family 166 217 2.6E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28400 1e423045acf7a23d60562b4753113281 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 4.4E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28400 1e423045acf7a23d60562b4753113281 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 4.4E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS28400 1e423045acf7a23d60562b4753113281 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 4.4E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS17415 845cb2bdf8ad951fa5df7c77dd9145f3 112 Gene3D G3DSA:3.10.20.30 2 104 3.9E-18 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS17415 845cb2bdf8ad951fa5df7c77dd9145f3 112 SUPERFAMILY SSF54292 3 93 5.36E-17 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS17415 845cb2bdf8ad951fa5df7c77dd9145f3 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 85 1.8E-9 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 SUPERFAMILY SSF51338 14 59 2.59E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 SUPERFAMILY SSF51338 349 385 2.59E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 SUPERFAMILY SSF51556 59 147 2.95E-12 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 SUPERFAMILY SSF51556 189 348 2.95E-12 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 Gene3D G3DSA:3.20.20.140 70 367 2.7E-25 T 28-03-2018 AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 Gene3D G3DSA:2.30.40.10 12 69 1.7E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 PIRSF PIRSF038971 11 383 5.4E-105 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25945 b9ba6a1b132ca6c5ac8a32ba4e54d19e 398 Pfam PF01979 Amidohydrolase family 285 366 2.8E-6 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS31090 82dbf63a976e61d1b33a228154c8ed60 129 Pfam PF07007 Lysozyme inhibitor LprI 44 123 1.4E-11 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AL504_RS18945 2a8a6edeb19e6e7fe881b75bad57bdaf 222 Gene3D G3DSA:1.10.3720.10 2 222 1.9E-37 T 28-03-2018 AL504_RS18945 2a8a6edeb19e6e7fe881b75bad57bdaf 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 1.1E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18945 2a8a6edeb19e6e7fe881b75bad57bdaf 222 SUPERFAMILY SSF161098 15 205 6.8E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18945 2a8a6edeb19e6e7fe881b75bad57bdaf 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 2.7E-28 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 4 397 1.3E-114 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 Gene3D G3DSA:3.50.50.60 1 193 6.4E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 SUPERFAMILY SSF160996 187 345 4.45E-38 T 28-03-2018 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 Gene3D G3DSA:2.40.30.10 194 271 6.8E-24 T 28-03-2018 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 SUPERFAMILY SSF51905 343 400 5.48E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 SUPERFAMILY SSF51905 1 186 5.48E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 Gene3D G3DSA:1.10.8.260 272 328 1.8E-18 T 28-03-2018 IPR023166 HI0933 insert-like domain AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 Pfam PF03486 HI0933-like protein 2 398 6.6E-135 T 28-03-2018 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 2.7E-6 T 28-03-2018 AL504_RS22985 94e03f276b0be33f05953c998ac3bf5d 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.7E-6 T 28-03-2018 AL504_RS11275 7556807f878f2c434ab557eaafeee04c 446 Gene3D G3DSA:3.20.20.70 71 352 1.1E-29 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS11275 7556807f878f2c434ab557eaafeee04c 446 SUPERFAMILY SSF102114 82 316 2.09E-13 T 28-03-2018 AL504_RS11275 7556807f878f2c434ab557eaafeee04c 446 Pfam PF04055 Radical SAM superfamily 106 284 2.3E-11 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS11275 7556807f878f2c434ab557eaafeee04c 446 SMART SM00729 102 327 1.1E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS16960 6ea3f3956b38eef3bccd0ee46d370482 258 Gene3D G3DSA:1.10.12.10 219 256 8.8E-25 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS16960 6ea3f3956b38eef3bccd0ee46d370482 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 2.2E-83 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS16960 6ea3f3956b38eef3bccd0ee46d370482 258 Gene3D G3DSA:3.90.226.10 1 218 9.8E-77 T 28-03-2018 AL504_RS16960 6ea3f3956b38eef3bccd0ee46d370482 258 SUPERFAMILY SSF52096 1 258 4.7E-93 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS27910 f30fe3180cb270266374f9c43adccff4 60 Pfam PF13318 Protein of unknown function (DUF4089) 9 58 2.2E-9 T 28-03-2018 IPR025148 Protein of unknown function DUF4089 AL504_RS28750 241613555f06824d0d858ec790e616e6 255 SUPERFAMILY SSF51735 6 254 3.48E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28750 241613555f06824d0d858ec790e616e6 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 4.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28750 241613555f06824d0d858ec790e616e6 255 Gene3D G3DSA:3.40.50.720 45 255 5.2E-61 T 28-03-2018 AL504_RS28750 241613555f06824d0d858ec790e616e6 255 Gene3D G3DSA:3.40.50.720 1 44 3.3E-6 T 28-03-2018 AL504_RS28750 241613555f06824d0d858ec790e616e6 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 4.8E-61 T 28-03-2018 AL504_RS20165 eb90045233d3cbd997f6cdd5c9ea0cb1 205 SUPERFAMILY SSF48498 81 195 1.78E-27 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS20165 eb90045233d3cbd997f6cdd5c9ea0cb1 205 Gene3D G3DSA:1.10.357.10 62 196 1.2E-25 T 28-03-2018 AL504_RS20165 eb90045233d3cbd997f6cdd5c9ea0cb1 205 Gene3D G3DSA:1.10.10.60 5 61 1.5E-13 T 28-03-2018 AL504_RS20165 eb90045233d3cbd997f6cdd5c9ea0cb1 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.8E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS20165 eb90045233d3cbd997f6cdd5c9ea0cb1 205 SUPERFAMILY SSF46689 5 74 8.21E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS19380 0e4ccbf879d8f3b84a87a1e96106fae7 184 Pfam PF04542 Sigma-70 region 2 15 82 4.7E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS19380 0e4ccbf879d8f3b84a87a1e96106fae7 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 163 2.2E-17 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS19380 0e4ccbf879d8f3b84a87a1e96106fae7 184 Pfam PF08281 Sigma-70, region 4 113 166 1.9E-11 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS19380 0e4ccbf879d8f3b84a87a1e96106fae7 184 Gene3D G3DSA:1.10.1740.10 8 87 1.3E-14 T 28-03-2018 AL504_RS19380 0e4ccbf879d8f3b84a87a1e96106fae7 184 SUPERFAMILY SSF88659 96 166 7.19E-8 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS19380 0e4ccbf879d8f3b84a87a1e96106fae7 184 Gene3D G3DSA:1.10.10.10 88 170 1.1E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19380 0e4ccbf879d8f3b84a87a1e96106fae7 184 SUPERFAMILY SSF88946 11 79 8.63E-12 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17575 53d75d4a81a32951d458e6bd0ecc00a6 484 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 222 8.2E-21 T 28-03-2018 AL504_RS00020 57976b548c5a6a99b592cf61da8a8356 609 Pfam PF03432 Relaxase/Mobilisation nuclease domain 12 250 1.4E-59 T 28-03-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 AL504_RS03630 525d4a687e81d289a5aece9ef120b127 373 SUPERFAMILY SSF55909 38 373 9.46E-112 T 28-03-2018 AL504_RS03630 525d4a687e81d289a5aece9ef120b127 373 Gene3D G3DSA:3.75.10.10 29 373 6.8E-112 T 28-03-2018 AL504_RS03630 525d4a687e81d289a5aece9ef120b127 373 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 41 372 5.1E-101 T 28-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AL504_RS04370 d26d6312131324d3427ecffa3f72cac9 332 SUPERFAMILY SSF46689 233 285 1.79E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04370 d26d6312131324d3427ecffa3f72cac9 332 SMART SM00342 250 331 2.7E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS04370 d26d6312131324d3427ecffa3f72cac9 332 SUPERFAMILY SSF46689 286 330 8.56E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04370 d26d6312131324d3427ecffa3f72cac9 332 Gene3D G3DSA:1.10.10.60 286 331 1.6E-9 T 28-03-2018 AL504_RS04370 d26d6312131324d3427ecffa3f72cac9 332 Gene3D G3DSA:1.10.10.60 229 285 8.5E-8 T 28-03-2018 AL504_RS04370 d26d6312131324d3427ecffa3f72cac9 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 287 329 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS04370 d26d6312131324d3427ecffa3f72cac9 332 Pfam PF12833 Helix-turn-helix domain 256 330 1.3E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS17095 de3188b6726da856aff540bdc28be7ea 267 SUPERFAMILY SSF52833 128 266 3.25E-32 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS17095 de3188b6726da856aff540bdc28be7ea 267 Pfam PF13098 Thioredoxin-like domain 146 266 3.6E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS17095 de3188b6726da856aff540bdc28be7ea 267 Pfam PF10411 Disulfide bond isomerase protein N-terminus 66 117 2.4E-11 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL504_RS17095 de3188b6726da856aff540bdc28be7ea 267 ProSitePatterns PS00194 Thioredoxin family active site. 153 171 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS17095 de3188b6726da856aff540bdc28be7ea 267 Gene3D G3DSA:3.40.30.10 136 267 5.6E-18 T 28-03-2018 AL504_RS17095 de3188b6726da856aff540bdc28be7ea 267 Gene3D G3DSA:3.10.450.70 57 118 5.9E-12 T 28-03-2018 AL504_RS27995 40d94d079b2c4deaeb8ebf4d9d6ab8ab 329 Gene3D G3DSA:3.40.190.10 157 302 6.6E-14 T 28-03-2018 AL504_RS27995 40d94d079b2c4deaeb8ebf4d9d6ab8ab 329 PIRSF PIRSF017082 2 328 3.5E-91 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS27995 40d94d079b2c4deaeb8ebf4d9d6ab8ab 329 SUPERFAMILY SSF53850 113 293 1.85E-16 T 28-03-2018 AL504_RS27995 40d94d079b2c4deaeb8ebf4d9d6ab8ab 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 324 4.1E-101 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 180 8.9E-4 T 28-03-2018 AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 238 2.1E-55 T 28-03-2018 AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 3.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 Gene3D G3DSA:3.40.50.720 45 245 2.5E-57 T 28-03-2018 AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 Gene3D G3DSA:3.40.50.720 5 44 3.5E-9 T 28-03-2018 AL504_RS21755 ff9ebea60d1e71e3ac5caa58fb992ade 246 SUPERFAMILY SSF51735 9 241 1.88E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS12340 128930015a485cba4a6a085a380e93f1 281 Pfam PF01063 Amino-transferase class IV 32 252 3.4E-39 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS12340 128930015a485cba4a6a085a380e93f1 281 Gene3D G3DSA:3.30.470.10 1 121 1.7E-24 T 28-03-2018 AL504_RS12340 128930015a485cba4a6a085a380e93f1 281 Gene3D G3DSA:3.20.10.10 122 281 1.4E-32 T 28-03-2018 AL504_RS12340 128930015a485cba4a6a085a380e93f1 281 SUPERFAMILY SSF56752 4 276 1.29E-71 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS01385 92eaeb2fe3a38a42c3f754878d550e3f 325 SUPERFAMILY SSF53850 112 283 7.17E-14 T 28-03-2018 AL504_RS01385 92eaeb2fe3a38a42c3f754878d550e3f 325 PIRSF PIRSF017082 1 324 2.5E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01385 92eaeb2fe3a38a42c3f754878d550e3f 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 3.4E-88 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01385 92eaeb2fe3a38a42c3f754878d550e3f 325 Gene3D G3DSA:3.40.190.10 125 235 1.2E-12 T 28-03-2018 AL504_RS10605 be4e42a14be130dcb7198bdeab8c2f62 231 Gene3D G3DSA:3.90.850.10 3 231 9.2E-76 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS10605 be4e42a14be130dcb7198bdeab8c2f62 231 SUPERFAMILY SSF56529 20 231 2.75E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS10605 be4e42a14be130dcb7198bdeab8c2f62 231 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 230 1.7E-51 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS25110 57dcfd968a5458772e578a2725579639 377 Gene3D G3DSA:3.40.50.1100 187 376 4.3E-35 T 28-03-2018 AL504_RS25110 57dcfd968a5458772e578a2725579639 377 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 67 361 1.4E-64 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS25110 57dcfd968a5458772e578a2725579639 377 Gene3D G3DSA:3.40.50.1100 75 186 2.4E-21 T 28-03-2018 AL504_RS25110 57dcfd968a5458772e578a2725579639 377 SUPERFAMILY SSF53686 42 370 1.96E-82 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS15870 98099710e9d1a55887d7a6cf9c3c04c8 277 PIRSF PIRSF000903 3 274 5.8E-103 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL504_RS15870 98099710e9d1a55887d7a6cf9c3c04c8 277 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 3 271 43.693 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL504_RS15870 98099710e9d1a55887d7a6cf9c3c04c8 277 SUPERFAMILY SSF56300 2 258 2.24E-51 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS15870 98099710e9d1a55887d7a6cf9c3c04c8 277 Pfam PF00149 Calcineurin-like phosphoesterase 4 143 5.7E-9 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS15870 98099710e9d1a55887d7a6cf9c3c04c8 277 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 5 266 4.9E-73 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL504_RS15870 98099710e9d1a55887d7a6cf9c3c04c8 277 Gene3D G3DSA:3.60.21.10 2 275 2.4E-43 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SUPERFAMILY SSF55874 533 702 1.57E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Pfam PF00072 Response regulator receiver domain 837 943 2.5E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Gene3D G3DSA:3.40.50.2300 814 956 2.2E-34 T 28-03-2018 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Pfam PF01627 Hpt domain 985 1065 2.1E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SMART SM00387 591 706 1.1E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Pfam PF00512 His Kinase A (phospho-acceptor) domain 479 544 2.9E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Gene3D G3DSA:3.30.450.20 355 474 5.7E-12 T 28-03-2018 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SUPERFAMILY SSF55785 350 457 5.65E-8 T 28-03-2018 IPR000014 PAS domain AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SMART SM00073 974 1067 1.0E-6 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SUPERFAMILY SSF47384 463 545 1.31E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 684 1.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 646 1.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 660 1.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 703 1.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SMART SM00448 835 946 2.3E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 705 2.7E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SUPERFAMILY SSF47226 929 1047 1.83E-13 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SMART SM00388 479 544 8.0E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Gene3D G3DSA:1.10.287.130 475 540 5.7E-16 T 28-03-2018 AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Gene3D G3DSA:3.30.565.10 548 710 1.5E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 SUPERFAMILY SSF52172 834 950 2.56E-34 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28185 bd6fada448ba205bacfa8d55fe88f83e 1070 Gene3D G3DSA:1.20.120.160 964 1070 1.1E-13 T 28-03-2018 AL504_RS29950 83896bc98066c3995691e83cc61ce742 184 Pfam PF13302 Acetyltransferase (GNAT) domain 14 153 3.6E-22 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS29950 83896bc98066c3995691e83cc61ce742 184 Gene3D G3DSA:3.40.630.30 3 178 2.0E-22 T 28-03-2018 AL504_RS29950 83896bc98066c3995691e83cc61ce742 184 SUPERFAMILY SSF55729 9 156 3.04E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82693 568 661 7.32E-11 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 Pfam PF00873 AcrB/AcrD/AcrF family 4 1024 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 342 365 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 475 498 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 PRINTS PR00702 Acriflavin resistance protein family signature 369 390 4.6E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82866 302 502 5.1E-48 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82693 40 132 8.72E-22 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82693 281 336 1.59E-20 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82693 136 182 1.59E-20 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82714 183 265 4.45E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82866 808 1030 3.01E-43 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 Gene3D G3DSA:3.30.70.1430 40 142 2.9E-24 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 SUPERFAMILY SSF82714 719 799 1.44E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 Gene3D G3DSA:1.20.1640.10 817 1027 4.1E-34 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 Gene3D G3DSA:1.20.1640.10 293 513 3.6E-47 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 Gene3D G3DSA:3.30.70.1430 570 666 2.0E-8 T 28-03-2018 AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 Gene3D G3DSA:3.30.2090.10 181 269 2.9E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS10100 f71db2a83fac4ef0137b302161f35b99 1054 Gene3D G3DSA:3.30.2090.10 715 806 3.3E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 SUPERFAMILY SSF55031 180 290 2.54E-21 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 PIRSF PIRSF037238 1 375 1.9E-139 T 28-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 SUPERFAMILY SSF53187 299 374 2.21E-49 T 28-03-2018 AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 SUPERFAMILY SSF53187 6 189 2.21E-49 T 28-03-2018 AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 Pfam PF01546 Peptidase family M20/M25/M40 76 372 1.4E-28 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 Gene3D G3DSA:3.40.630.10 3 375 2.7E-53 T 28-03-2018 AL504_RS16855 4b646afd8e4d60452cd247ece17bf591 375 Pfam PF07687 Peptidase dimerisation domain 177 272 9.9E-18 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS29300 d9762608ecdcd95766ebcaa410feb448 184 Gene3D G3DSA:1.10.260.40 3 62 1.9E-17 T 28-03-2018 AL504_RS29300 d9762608ecdcd95766ebcaa410feb448 184 SUPERFAMILY SSF51182 75 181 4.07E-25 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS29300 d9762608ecdcd95766ebcaa410feb448 184 Gene3D G3DSA:2.60.120.10 63 184 3.0E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS29300 d9762608ecdcd95766ebcaa410feb448 184 SMART SM00530 7 62 4.5E-17 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS29300 d9762608ecdcd95766ebcaa410feb448 184 Pfam PF01381 Helix-turn-helix 8 60 2.2E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS29300 d9762608ecdcd95766ebcaa410feb448 184 Pfam PF07883 Cupin domain 127 181 9.0E-15 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS29300 d9762608ecdcd95766ebcaa410feb448 184 SUPERFAMILY SSF47413 2 67 7.6E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 Pfam PF00672 HAMP domain 221 266 2.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 489 1.3E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 2.5E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 2.5E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 101 116 2.5E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 SMART SM00283 274 521 5.1E-90 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 SMART SM00304 221 273 2.9E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 Gene3D G3DSA:1.10.287.950 62 328 3.8E-19 T 28-03-2018 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 Gene3D G3DSA:1.10.287.950 329 525 1.6E-48 T 28-03-2018 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 SUPERFAMILY SSF58104 241 523 7.19E-73 T 28-03-2018 AL504_RS30420 6b2e1054f8c0c4f477642638c2c15a65 574 Pfam PF12729 Four helix bundle sensory module for signal transduction 13 177 3.8E-9 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL504_RS27700 e5887f987f820cd25db1c3b7eab036c1 161 Gene3D G3DSA:3.40.630.30 2 89 3.8E-16 T 28-03-2018 AL504_RS27700 e5887f987f820cd25db1c3b7eab036c1 161 Gene3D G3DSA:3.40.630.30 90 152 1.4E-18 T 28-03-2018 AL504_RS27700 e5887f987f820cd25db1c3b7eab036c1 161 Pfam PF00583 Acetyltransferase (GNAT) family 48 136 3.8E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS27700 e5887f987f820cd25db1c3b7eab036c1 161 SUPERFAMILY SSF55729 8 160 1.44E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS17080 8d935152fb13db7ecdf4de38b4f1ffb7 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 5 116 1.5E-24 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL504_RS17080 8d935152fb13db7ecdf4de38b4f1ffb7 119 Gene3D G3DSA:3.30.1130.10 3 119 1.6E-29 T 28-03-2018 AL504_RS17080 8d935152fb13db7ecdf4de38b4f1ffb7 119 SUPERFAMILY SSF55620 3 119 1.5E-29 T 28-03-2018 AL504_RS17080 8d935152fb13db7ecdf4de38b4f1ffb7 119 SMART SM00905 6 117 2.2E-31 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL504_RS17080 8d935152fb13db7ecdf4de38b4f1ffb7 119 Pfam PF02152 Dihydroneopterin aldolase 6 116 1.5E-28 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL504_RS17080 8d935152fb13db7ecdf4de38b4f1ffb7 119 TIGRFAM TIGR00526 folB_dom: FolB domain 5 117 1.3E-19 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 4 372 38.738 T 28-03-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 Gene3D G3DSA:1.10.3410.10 201 305 4.1E-24 T 28-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 Pfam PF01966 HD domain 64 198 3.4E-15 T 28-03-2018 IPR006674 HD domain AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 168 1.6E-56 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 SMART SM00471 60 208 8.4E-11 T 28-03-2018 IPR003607 HD/PDEase domain AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 Pfam PF13286 Phosphohydrolase-associated domain 285 370 1.3E-30 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 Gene3D G3DSA:1.10.3210.10 1 200 3.2E-57 T 28-03-2018 AL504_RS20115 c4d9280ab652819b87e01479a0ef0711 375 SUPERFAMILY SSF109604 15 373 4.26E-91 T 28-03-2018 AL504_RS25355 51a05125c6514a404f366f3c05e20ecf 113 Pfam PF13670 Peptidase propeptide and YPEB domain 36 109 4.0E-9 T 28-03-2018 IPR025711 PepSY domain AL504_RS25355 51a05125c6514a404f366f3c05e20ecf 113 Gene3D G3DSA:3.10.450.40 20 110 4.0E-4 T 28-03-2018 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 SUPERFAMILY SSF69075 319 418 2.09E-27 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 101 124 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 6 413 1.5E-128 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 Gene3D G3DSA:3.40.50.720 163 315 8.5E-21 T 28-03-2018 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 322 417 2.4E-27 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 9 158 2.3E-45 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 SUPERFAMILY SSF51735 165 316 8.06E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 174 306 2.8E-43 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 SUPERFAMILY SSF69742 5 160 9.68E-44 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 Gene3D G3DSA:1.10.1200.70 334 418 1.8E-25 T 28-03-2018 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 4 417 29.188 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS21635 2c9eebad58632d27d0215a3c6e50d089 424 PIRSF PIRSF000445 3 424 3.5E-146 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL504_RS13960 c51cd7ce919df03c46d821446d0f666f 247 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 220 238 1.4E-4 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS13960 c51cd7ce919df03c46d821446d0f666f 247 Pfam PF00005 ABC transporter 22 167 1.6E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS13960 c51cd7ce919df03c46d821446d0f666f 247 Gene3D G3DSA:3.40.50.300 1 240 2.0E-51 T 28-03-2018 AL504_RS13960 c51cd7ce919df03c46d821446d0f666f 247 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS13960 c51cd7ce919df03c46d821446d0f666f 247 SUPERFAMILY SSF52540 5 238 4.35E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13960 c51cd7ce919df03c46d821446d0f666f 247 SMART SM00382 30 239 1.5E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS11080 bcc44c3cc01cdff8101f326ba128bb3c 167 Gene3D G3DSA:3.30.300.70 2 71 2.1E-17 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL504_RS11080 bcc44c3cc01cdff8101f326ba128bb3c 167 SUPERFAMILY SSF74942 75 156 3.14E-9 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL504_RS11080 bcc44c3cc01cdff8101f326ba128bb3c 167 Gene3D G3DSA:2.30.30.180 78 157 8.8E-16 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL504_RS11080 bcc44c3cc01cdff8101f326ba128bb3c 167 SUPERFAMILY SSF75420 3 74 2.35E-14 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL504_RS11080 bcc44c3cc01cdff8101f326ba128bb3c 167 Pfam PF17384 RimP C-terminal SH3 domain 77 158 5.1E-9 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL504_RS11080 bcc44c3cc01cdff8101f326ba128bb3c 167 Pfam PF02576 RimP N-terminal domain 9 74 4.9E-15 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL504_RS11080 bcc44c3cc01cdff8101f326ba128bb3c 167 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 2 160 20.859 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AL504_RS23845 e66869a01546260d0287e6fddc7a7020 302 Gene3D G3DSA:1.10.10.10 1 90 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23845 e66869a01546260d0287e6fddc7a7020 302 Pfam PF03466 LysR substrate binding domain 88 294 1.9E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS23845 e66869a01546260d0287e6fddc7a7020 302 SUPERFAMILY SSF46785 3 112 9.53E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23845 e66869a01546260d0287e6fddc7a7020 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23845 e66869a01546260d0287e6fddc7a7020 302 Gene3D G3DSA:3.40.190.10 92 177 1.8E-10 T 28-03-2018 AL504_RS23845 e66869a01546260d0287e6fddc7a7020 302 Gene3D G3DSA:3.40.190.10 178 263 4.7E-22 T 28-03-2018 AL504_RS23845 e66869a01546260d0287e6fddc7a7020 302 SUPERFAMILY SSF53850 90 297 1.27E-47 T 28-03-2018 AL504_RS05325 b0fc3e987f73fd46389a2112eb0502b5 875 Gene3D G3DSA:3.40.50.300 704 867 0.0046 T 28-03-2018 AL504_RS05325 b0fc3e987f73fd46389a2112eb0502b5 875 Pfam PF13514 AAA domain 1 47 7.4E-7 T 28-03-2018 AL504_RS05325 b0fc3e987f73fd46389a2112eb0502b5 875 Gene3D G3DSA:3.40.50.300 1 360 9.7E-21 T 28-03-2018 AL504_RS05325 b0fc3e987f73fd46389a2112eb0502b5 875 SUPERFAMILY SSF52540 1 167 4.14E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05325 b0fc3e987f73fd46389a2112eb0502b5 875 SUPERFAMILY SSF52540 769 859 4.14E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10655 3fb1da98e28e3c2b1c311ac25399db53 176 Gene3D G3DSA:3.90.80.10 1 176 2.9E-55 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL504_RS10655 3fb1da98e28e3c2b1c311ac25399db53 176 SUPERFAMILY SSF50324 3 175 6.41E-68 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL504_RS10655 3fb1da98e28e3c2b1c311ac25399db53 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.325 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL504_RS10655 3fb1da98e28e3c2b1c311ac25399db53 176 Pfam PF00719 Inorganic pyrophosphatase 18 174 5.4E-54 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL504_RS03325 0199eeed38ed5b4c89793c3542e813f8 466 Gene3D G3DSA:3.50.50.60 1 199 1.8E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03325 0199eeed38ed5b4c89793c3542e813f8 466 Gene3D G3DSA:3.50.50.60 200 432 4.8E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03325 0199eeed38ed5b4c89793c3542e813f8 466 SUPERFAMILY SSF51905 4 272 1.78E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03325 0199eeed38ed5b4c89793c3542e813f8 466 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 341 8.0E-120 T 28-03-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AL504_RS19980 f1496ab717510d180f3fd5d23a4db093 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 121 26.054 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19980 f1496ab717510d180f3fd5d23a4db093 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 121 3.3E-35 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19980 f1496ab717510d180f3fd5d23a4db093 121 Gene3D G3DSA:3.30.420.100 1 121 3.0E-36 T 28-03-2018 AL504_RS19980 f1496ab717510d180f3fd5d23a4db093 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 121 2.6E-36 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19980 f1496ab717510d180f3fd5d23a4db093 121 SUPERFAMILY SSF53137 3 119 2.03E-49 T 28-03-2018 AL504_RS12790 757a6b13f035ac0ef34058e3fc98fe55 117 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 11 116 1.2E-9 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL504_RS12790 757a6b13f035ac0ef34058e3fc98fe55 117 SUPERFAMILY SSF110857 9 116 1.02E-11 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL504_RS12790 757a6b13f035ac0ef34058e3fc98fe55 117 Gene3D G3DSA:3.10.490.10 1 117 8.0E-20 T 28-03-2018 AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 Gene3D G3DSA:3.40.710.10 272 749 3.8E-112 T 28-03-2018 AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 Gene3D G3DSA:1.10.3810.10 67 265 2.2E-76 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 Pfam PF00905 Penicillin binding protein transpeptidase domain 450 703 1.2E-36 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 Pfam PF00912 Transglycosylase 76 249 7.4E-62 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 84 734 1.4E-167 T 28-03-2018 AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 SUPERFAMILY SSF53955 61 270 7.03E-74 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 SUPERFAMILY SSF56601 230 252 6.3E-115 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 SUPERFAMILY SSF56601 444 757 6.3E-115 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 SUPERFAMILY SSF56601 285 336 6.3E-115 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS08125 bfaa9ff46b78e5cc9a38a0d479f1b90a 895 Pfam PF17092 Penicillin-binding protein OB-like domain 339 446 7.3E-17 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 Gene3D G3DSA:3.40.190.10 88 177 6.1E-25 T 28-03-2018 AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 SUPERFAMILY SSF46785 1 86 4.93E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 Pfam PF03466 LysR substrate binding domain 87 292 7.0E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 Gene3D G3DSA:1.10.10.10 1 85 2.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 Gene3D G3DSA:3.40.190.10 178 269 1.8E-28 T 28-03-2018 AL504_RS04410 99c5f3a0770f3cc30494bfa9b996c862 302 SUPERFAMILY SSF53850 88 297 6.95E-41 T 28-03-2018 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 PIRSF PIRSF000429 1 393 2.0E-125 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 Pfam PF02803 Thiolase, C-terminal domain 271 392 2.0E-45 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 SUPERFAMILY SSF53901 4 269 2.03E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 SUPERFAMILY SSF53901 271 392 3.35E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 Gene3D G3DSA:3.40.47.10 266 390 1.3E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 4.5E-91 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 Gene3D G3DSA:3.40.47.10 160 265 7.1E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 Gene3D G3DSA:3.40.47.10 1 159 5.2E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS26980 d00e7e5e4db7cc27b39a3330f137d872 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.2E-138 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 Gene3D G3DSA:2.30.40.10 25 158 6.8E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 SUPERFAMILY SSF51556 97 159 2.47E-44 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 SUPERFAMILY SSF51556 239 529 2.47E-44 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 SUPERFAMILY SSF51338 35 98 2.8E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 SUPERFAMILY SSF51338 529 579 2.8E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 Gene3D G3DSA:3.20.20.140 225 512 1.3E-34 T 28-03-2018 AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 Gene3D G3DSA:2.30.40.10 513 577 1.3E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS19305 acb335ec3c22bbcbfd82779e955ad408 661 Pfam PF07969 Amidohydrolase family 88 570 2.0E-118 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS24165 aa68c79990d3031c3b2c19404510c361 527 Gene3D G3DSA:3.40.190.10 150 291 3.2E-46 T 28-03-2018 AL504_RS24165 aa68c79990d3031c3b2c19404510c361 527 PIRSF PIRSF002741 2 527 8.9E-145 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS24165 aa68c79990d3031c3b2c19404510c361 527 Gene3D G3DSA:3.10.105.10 292 498 7.6E-49 T 28-03-2018 AL504_RS24165 aa68c79990d3031c3b2c19404510c361 527 Gene3D G3DSA:3.90.76.10 54 149 4.0E-33 T 28-03-2018 AL504_RS24165 aa68c79990d3031c3b2c19404510c361 527 SUPERFAMILY SSF53850 28 525 8.32E-135 T 28-03-2018 AL504_RS24165 aa68c79990d3031c3b2c19404510c361 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 429 1.4E-90 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 Gene3D G3DSA:1.10.3080.10 14 456 3.6E-70 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 Pfam PF00654 Voltage gated chloride channel 83 434 6.0E-70 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 PRINTS PR00762 Chloride channel signature 128 147 4.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 PRINTS PR00762 Chloride channel signature 184 203 4.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 PRINTS PR00762 Chloride channel signature 384 400 4.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 PRINTS PR00762 Chloride channel signature 402 421 4.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 PRINTS PR00762 Chloride channel signature 94 111 4.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 PRINTS PR00762 Chloride channel signature 354 374 4.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS30425 f58804afc036e78f238b7e451ec884f0 468 SUPERFAMILY SSF81340 14 449 4.32E-85 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS16605 e39503acf89fe7cdc2a74f73b518f90b 93 SMART SM00858 11 89 5.5E-10 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS16605 e39503acf89fe7cdc2a74f73b518f90b 93 Pfam PF08666 SAF domain 11 89 3.8E-5 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS16330 030691ed8efc364a24627fb8ce9f20fa 297 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 151 4.3E-15 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS16330 030691ed8efc364a24627fb8ce9f20fa 297 Gene3D G3DSA:3.10.180.10 1 88 1.4E-6 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS16330 030691ed8efc364a24627fb8ce9f20fa 297 Gene3D G3DSA:3.10.180.10 89 222 2.2E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS16330 030691ed8efc364a24627fb8ce9f20fa 297 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 131 150 - T 28-03-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AL504_RS16330 030691ed8efc364a24627fb8ce9f20fa 297 SUPERFAMILY SSF54593 9 153 2.69E-27 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS14005 bc2353ef11c8aa25eb369a5c71e71a8e 210 SUPERFAMILY SSF56752 4 206 2.09E-40 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS14005 bc2353ef11c8aa25eb369a5c71e71a8e 210 Gene3D G3DSA:3.30.470.10 4 79 2.8E-13 T 28-03-2018 AL504_RS14005 bc2353ef11c8aa25eb369a5c71e71a8e 210 Pfam PF01063 Amino-transferase class IV 5 206 1.4E-34 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS14005 bc2353ef11c8aa25eb369a5c71e71a8e 210 Gene3D G3DSA:3.20.10.10 83 208 5.4E-27 T 28-03-2018 AL504_RS19785 e9dfa6ee57f19e649a66fe5aec43fe07 354 Pfam PF01757 Acyltransferase family 5 317 2.5E-21 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 Gene3D G3DSA:3.40.50.970 429 620 1.8E-25 T 28-03-2018 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 731 918 6.3E-20 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 Gene3D G3DSA:3.40.50.920 282 387 7.2E-5 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 Gene3D G3DSA:3.40.50.970 24 281 4.0E-18 T 28-03-2018 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 SUPERFAMILY SSF53323 723 942 5.1E-24 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 SUPERFAMILY SSF52922 282 371 2.49E-6 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 Gene3D G3DSA:3.40.920.10 722 933 1.0E-45 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 SUPERFAMILY SSF52518 435 616 4.0E-10 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS15715 ec31612d2cf93c9c2bb731d2f9f8d21b 1168 SUPERFAMILY SSF52518 27 229 7.65E-15 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS27915 fe7bd3fa18bd4684ea9d656d66349e72 273 SUPERFAMILY SSF52540 27 248 1.12E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27915 fe7bd3fa18bd4684ea9d656d66349e72 273 SMART SM00382 51 232 5.9E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS27915 fe7bd3fa18bd4684ea9d656d66349e72 273 Pfam PF00005 ABC transporter 43 181 6.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS27915 fe7bd3fa18bd4684ea9d656d66349e72 273 Gene3D G3DSA:3.40.50.300 23 244 1.5E-57 T 28-03-2018 AL504_RS25000 e7328c37ade4834378634aa4e8002135 116 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 25 98 5.7E-14 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AL504_RS25000 e7328c37ade4834378634aa4e8002135 116 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 18 112 3.8E-34 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 SUPERFAMILY SSF56935 22 374 3.66E-72 T 28-03-2018 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00184 Neisseria sp. porin signature 156 173 1.1E-9 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00184 Neisseria sp. porin signature 56 81 1.1E-9 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00184 Neisseria sp. porin signature 328 352 1.1E-9 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 Pfam PF13609 Gram-negative porin 7 354 3.3E-56 T 28-03-2018 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 Gene3D G3DSA:2.40.160.10 8 374 2.1E-68 T 28-03-2018 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 3.4E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 157 168 3.4E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 331 348 3.4E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 3.4E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS21195 47f62b9063007d1e8b9abef3a853e290 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 199 211 3.4E-6 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS23985 f171b3547fbbcacf2299ef4b28c58b1e 406 Pfam PF03583 Secretory lipase 137 388 3.4E-17 T 28-03-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AL504_RS23985 f171b3547fbbcacf2299ef4b28c58b1e 406 SUPERFAMILY SSF53474 316 385 5.86E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23985 f171b3547fbbcacf2299ef4b28c58b1e 406 SUPERFAMILY SSF53474 88 241 5.86E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23985 f171b3547fbbcacf2299ef4b28c58b1e 406 Gene3D G3DSA:3.40.50.1820 16 387 2.7E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23985 f171b3547fbbcacf2299ef4b28c58b1e 406 PIRSF PIRSF029171 1 393 2.7E-111 T 28-03-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 SUPERFAMILY SSF46955 1 109 3.59E-22 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 Gene3D G3DSA:1.10.1660.10 1 57 1.6E-17 T 28-03-2018 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 SMART SM00422 1 70 4.6E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 Pfam PF00376 MerR family regulatory protein 2 39 2.8E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.6E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.6E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.6E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 Gene3D G3DSA:1.10.1660.10 58 135 6.2E-9 T 28-03-2018 AL504_RS01360 3e0b78d210f446d96bab399b4927de4f 136 Pfam PF09278 MerR, DNA binding 47 107 3.8E-13 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL504_RS18220 8a24ba96fbdd326cc181fb7baee4f50e 94 SUPERFAMILY SSF47598 47 88 4.89E-8 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL504_RS18220 8a24ba96fbdd326cc181fb7baee4f50e 94 Gene3D G3DSA:1.10.1220.10 6 89 5.4E-14 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS00035 a34df46c1dd237dcc004ba7c6d01cda7 306 Pfam PF11740 Plasmid replication region DNA-binding N-term 13 126 1.8E-17 T 28-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain AL504_RS00035 a34df46c1dd237dcc004ba7c6d01cda7 306 Gene3D G3DSA:1.20.120.330 70 227 2.1E-4 T 28-03-2018 AL504_RS00035 a34df46c1dd237dcc004ba7c6d01cda7 306 Gene3D G3DSA:1.10.10.60 2 56 1.9E-4 T 28-03-2018 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 PRINTS PR01693 Cyanase signature 34 51 2.0E-26 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 PRINTS PR01693 Cyanase signature 14 29 2.0E-26 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 PRINTS PR01693 Cyanase signature 132 142 2.0E-26 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 PRINTS PR01693 Cyanase signature 101 117 2.0E-26 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 PRINTS PR01693 Cyanase signature 83 97 2.0E-26 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 TIGRFAM TIGR00673 cynS: cyanase 6 147 1.0E-49 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 SUPERFAMILY SSF55234 80 147 1.31E-29 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 Gene3D G3DSA:1.10.260.40 1 80 1.5E-10 T 28-03-2018 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 Gene3D G3DSA:3.30.1160.10 81 146 3.2E-36 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 Pfam PF02560 Cyanate lyase C-terminal domain 79 145 3.2E-35 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 PIRSF PIRSF001263 1 147 1.0E-49 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 SUPERFAMILY SSF47413 1 77 4.3E-21 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 Hamap MF_00535 Cyanate hydratase [cynS]. 1 147 79.696 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS29390 32886e7f82d772acd44bc61bcb3a4b3b 147 SMART SM01116 75 147 1.3E-48 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS01125 24af37aa29e5ac95915f60b98d51a8f9 202 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 10 197 2.7E-80 T 28-03-2018 IPR018715 Protein of unknown function DUF2239 AL504_RS21220 7745919908387808ee7f61f7093ba0f2 322 PIRSF PIRSF017082 1 321 3.3E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21220 7745919908387808ee7f61f7093ba0f2 322 SUPERFAMILY SSF53850 113 282 5.24E-16 T 28-03-2018 AL504_RS21220 7745919908387808ee7f61f7093ba0f2 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 318 2.3E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21220 7745919908387808ee7f61f7093ba0f2 322 Gene3D G3DSA:3.40.190.10 121 231 6.1E-14 T 28-03-2018 AL504_RS11645 f94a2cadd4f7fcb7a4b6add2b90c593f 566 Pfam PF03929 PepSY-associated TM region 19 373 2.2E-66 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS12705 15643ea0ed01c8716788fe778f7a9d08 256 Gene3D G3DSA:3.20.20.370 2 256 9.5E-36 T 28-03-2018 AL504_RS12705 15643ea0ed01c8716788fe778f7a9d08 256 SUPERFAMILY SSF88713 39 251 3.56E-30 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS12705 15643ea0ed01c8716788fe778f7a9d08 256 Pfam PF01522 Polysaccharide deacetylase 42 145 1.8E-13 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL504_RS24155 90a0399aec43fb3e469d91fc90f7f069 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 293 5.2E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS24155 90a0399aec43fb3e469d91fc90f7f069 294 SUPERFAMILY SSF161098 88 277 1.44E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS24155 90a0399aec43fb3e469d91fc90f7f069 294 Gene3D G3DSA:1.10.3720.10 14 282 1.4E-44 T 28-03-2018 AL504_RS24155 90a0399aec43fb3e469d91fc90f7f069 294 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 60 3.5E-8 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS18720 09ddaac9b0f435a80140ef3681896664 410 SUPERFAMILY SSF103473 12 400 8.24E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS18720 09ddaac9b0f435a80140ef3681896664 410 Pfam PF05977 Transmembrane secretion effector 8 391 2.3E-34 T 28-03-2018 IPR010290 Transmembrane secretion effector AL504_RS18720 09ddaac9b0f435a80140ef3681896664 410 Gene3D G3DSA:1.20.1250.20 203 408 3.3E-12 T 28-03-2018 AL504_RS18720 09ddaac9b0f435a80140ef3681896664 410 Gene3D G3DSA:1.20.1250.20 8 202 8.8E-21 T 28-03-2018 AL504_RS27260 c67d89c465ee6a7c27234c2b51ef5d75 500 Gene3D G3DSA:3.40.309.10 272 468 7.3E-50 T 28-03-2018 AL504_RS27260 c67d89c465ee6a7c27234c2b51ef5d75 500 Pfam PF00171 Aldehyde dehydrogenase family 22 479 8.9E-130 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS27260 c67d89c465ee6a7c27234c2b51ef5d75 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS27260 c67d89c465ee6a7c27234c2b51ef5d75 500 SUPERFAMILY SSF53720 18 487 1.7E-133 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS27260 c67d89c465ee6a7c27234c2b51ef5d75 500 Gene3D G3DSA:3.40.605.10 12 271 4.0E-77 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS02630 08206273054caf95139f8dbb443650f6 308 Gene3D G3DSA:3.40.190.10 177 267 3.4E-16 T 28-03-2018 AL504_RS02630 08206273054caf95139f8dbb443650f6 308 Gene3D G3DSA:1.10.10.10 5 83 1.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02630 08206273054caf95139f8dbb443650f6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02630 08206273054caf95139f8dbb443650f6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02630 08206273054caf95139f8dbb443650f6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02630 08206273054caf95139f8dbb443650f6 308 Pfam PF03466 LysR substrate binding domain 92 294 1.6E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS02630 08206273054caf95139f8dbb443650f6 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02630 08206273054caf95139f8dbb443650f6 308 SUPERFAMILY SSF46785 6 111 5.06E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02630 08206273054caf95139f8dbb443650f6 308 SUPERFAMILY SSF53850 92 297 4.81E-32 T 28-03-2018 AL504_RS02630 08206273054caf95139f8dbb443650f6 308 Gene3D G3DSA:3.40.190.10 90 176 4.9E-18 T 28-03-2018 AL504_RS19960 e767f0d7a4658323aa95e7bc4f03338c 179 Gene3D G3DSA:3.30.1440.10 1 179 6.9E-75 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19960 e767f0d7a4658323aa95e7bc4f03338c 179 SUPERFAMILY SSF55282 3 179 5.18E-76 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19960 e767f0d7a4658323aa95e7bc4f03338c 179 PIRSF PIRSF002161 1 179 3.3E-62 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19960 e767f0d7a4658323aa95e7bc4f03338c 179 Pfam PF00281 Ribosomal protein L5 25 80 8.3E-26 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19960 e767f0d7a4658323aa95e7bc4f03338c 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.43 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19960 e767f0d7a4658323aa95e7bc4f03338c 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.6E-40 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19960 e767f0d7a4658323aa95e7bc4f03338c 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19915 4790ee163e85b3e353cf1f96b095b8f4 256 Gene3D G3DSA:3.40.50.300 1 256 3.0E-56 T 28-03-2018 AL504_RS19915 4790ee163e85b3e353cf1f96b095b8f4 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 248 4.5E-5 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS19915 4790ee163e85b3e353cf1f96b095b8f4 256 SUPERFAMILY SSF52540 2 247 1.61E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19915 4790ee163e85b3e353cf1f96b095b8f4 256 Pfam PF00005 ABC transporter 18 177 1.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19915 4790ee163e85b3e353cf1f96b095b8f4 256 SMART SM00382 26 226 1.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13465 e4f05adf0796eed44a8629f16ce19173 299 SUPERFAMILY SSF111331 5 290 2.22E-88 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AL504_RS13465 e4f05adf0796eed44a8629f16ce19173 299 Gene3D G3DSA:2.60.200.30 140 265 8.5E-37 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL504_RS13465 e4f05adf0796eed44a8629f16ce19173 299 Pfam PF01513 ATP-NAD kinase 52 272 1.8E-56 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL504_RS13465 e4f05adf0796eed44a8629f16ce19173 299 Gene3D G3DSA:3.40.50.10330 1 139 2.1E-38 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AL504_RS13465 e4f05adf0796eed44a8629f16ce19173 299 Hamap MF_00361 NAD kinase [nadK]. 4 288 32.756 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL504_RS22565 45a15aa69807c9a51e1b429f01698ba0 319 Pfam PF00753 Metallo-beta-lactamase superfamily 33 215 3.4E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS22565 45a15aa69807c9a51e1b429f01698ba0 319 Gene3D G3DSA:3.60.15.10 11 244 6.9E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS22565 45a15aa69807c9a51e1b429f01698ba0 319 SMART SM00849 33 222 7.0E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS22565 45a15aa69807c9a51e1b429f01698ba0 319 SUPERFAMILY SSF56281 15 310 1.05E-56 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS01065 29151e2b8017e044318a999429588e41 309 Gene3D G3DSA:3.40.190.10 181 272 1.2E-20 T 28-03-2018 AL504_RS01065 29151e2b8017e044318a999429588e41 309 SUPERFAMILY SSF46785 11 116 3.56E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01065 29151e2b8017e044318a999429588e41 309 Gene3D G3DSA:3.40.190.10 94 180 1.3E-19 T 28-03-2018 AL504_RS01065 29151e2b8017e044318a999429588e41 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01065 29151e2b8017e044318a999429588e41 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01065 29151e2b8017e044318a999429588e41 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01065 29151e2b8017e044318a999429588e41 309 Gene3D G3DSA:1.10.10.10 6 88 4.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01065 29151e2b8017e044318a999429588e41 309 Pfam PF03466 LysR substrate binding domain 93 299 3.1E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01065 29151e2b8017e044318a999429588e41 309 SUPERFAMILY SSF53850 95 301 4.34E-37 T 28-03-2018 AL504_RS01065 29151e2b8017e044318a999429588e41 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 5.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 Pfam PF07690 Major Facilitator Superfamily 39 354 6.5E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 Gene3D G3DSA:1.20.1250.20 18 196 7.0E-18 T 28-03-2018 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 PRINTS PR01035 Tetracycline resistance protein signature 257 277 5.2E-6 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 PRINTS PR01035 Tetracycline resistance protein signature 143 165 5.2E-6 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 PRINTS PR01035 Tetracycline resistance protein signature 55 74 5.2E-6 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 PRINTS PR01035 Tetracycline resistance protein signature 345 368 5.2E-6 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 Gene3D G3DSA:1.20.1250.20 206 391 5.0E-17 T 28-03-2018 AL504_RS14065 11aac3e5cf3e56623bf7bbda188ff361 402 SUPERFAMILY SSF103473 22 388 6.93E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS06250 e4d1388edaef2dc99521b4a08df4c3d7 138 Pfam PF07883 Cupin domain 49 116 4.7E-17 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS06250 e4d1388edaef2dc99521b4a08df4c3d7 138 SUPERFAMILY SSF51182 9 131 2.34E-28 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS06250 e4d1388edaef2dc99521b4a08df4c3d7 138 Gene3D G3DSA:2.60.120.10 1 133 4.9E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS12220 2c570f730c8dd85775a2956edf6cb87c 1013 Pfam PF00575 S1 RNA binding domain 36 117 3.2E-11 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL504_RS12220 2c570f730c8dd85775a2956edf6cb87c 1013 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 3.0E-157 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL504_RS12220 2c570f730c8dd85775a2956edf6cb87c 1013 Pfam PF10150 Ribonuclease E/G family 120 389 6.1E-91 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL504_RS12220 2c570f730c8dd85775a2956edf6cb87c 1013 SUPERFAMILY SSF50249 39 124 4.14E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS12220 2c570f730c8dd85775a2956edf6cb87c 1013 Hamap MF_00970 Ribonuclease E [rne]. 1 1001 36.06 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AL504_RS12220 2c570f730c8dd85775a2956edf6cb87c 1013 Gene3D G3DSA:2.40.50.140 32 123 1.7E-29 T 28-03-2018 AL504_RS12220 2c570f730c8dd85775a2956edf6cb87c 1013 SMART SM00316 37 118 7.1E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS02355 58b180d1cd52f89bbfa57a5819a07922 290 Gene3D G3DSA:1.10.10.10 3 92 2.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02355 58b180d1cd52f89bbfa57a5819a07922 290 SUPERFAMILY SSF53850 94 289 1.99E-27 T 28-03-2018 AL504_RS02355 58b180d1cd52f89bbfa57a5819a07922 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.4E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02355 58b180d1cd52f89bbfa57a5819a07922 290 SUPERFAMILY SSF46785 6 114 8.71E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02355 58b180d1cd52f89bbfa57a5819a07922 290 Pfam PF03466 LysR substrate binding domain 94 287 5.1E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS02355 58b180d1cd52f89bbfa57a5819a07922 290 Gene3D G3DSA:3.40.190.10 96 188 8.4E-10 T 28-03-2018 AL504_RS02355 58b180d1cd52f89bbfa57a5819a07922 290 Gene3D G3DSA:3.40.190.10 189 251 1.3E-7 T 28-03-2018 AL504_RS00225 c851ee4d9c47a8c6daf2e48b83acb473 326 Pfam PF16220 Domain of unknown function (DUF4880) 16 58 2.4E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS00225 c851ee4d9c47a8c6daf2e48b83acb473 326 Pfam PF04773 FecR protein 117 212 3.6E-16 T 28-03-2018 IPR006860 FecR protein AL504_RS00225 c851ee4d9c47a8c6daf2e48b83acb473 326 PIRSF PIRSF018266 5 326 1.3E-86 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS17020 3dbd45728a41b14224edce7428a859ec 345 SUPERFAMILY SSF56317 13 275 1.83E-54 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS17020 3dbd45728a41b14224edce7428a859ec 345 Gene3D G3DSA:3.60.110.10 1 344 3.4E-64 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS17020 3dbd45728a41b14224edce7428a859ec 345 Pfam PF00795 Carbon-nitrogen hydrolase 15 268 3.9E-48 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS07980 8537628af70a994f03bb94c342f4b889 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 1.6E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS07980 8537628af70a994f03bb94c342f4b889 86 Gene3D G3DSA:1.10.1200.10 2 86 7.4E-17 T 28-03-2018 AL504_RS07980 8537628af70a994f03bb94c342f4b889 86 SUPERFAMILY SSF47336 1 83 1.22E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS20905 14b5c294e1f12e453e9eb48e10540f66 240 Pfam PF00005 ABC transporter 17 166 2.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS20905 14b5c294e1f12e453e9eb48e10540f66 240 Gene3D G3DSA:3.40.50.300 1 239 7.3E-53 T 28-03-2018 AL504_RS20905 14b5c294e1f12e453e9eb48e10540f66 240 SMART SM00382 26 217 3.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS20905 14b5c294e1f12e453e9eb48e10540f66 240 SUPERFAMILY SSF52540 2 236 1.2E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20905 14b5c294e1f12e453e9eb48e10540f66 240 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS00280 6384b50ea555a87193b1a649db08f2e6 340 Gene3D G3DSA:3.40.50.1000 69 337 1.6E-19 T 28-03-2018 IPR023214 HAD-like domain AL504_RS00280 6384b50ea555a87193b1a649db08f2e6 340 Pfam PF12710 haloacid dehalogenase-like hydrolase 73 277 1.2E-25 T 28-03-2018 AL504_RS00280 6384b50ea555a87193b1a649db08f2e6 340 SUPERFAMILY SSF56784 71 325 8.68E-26 T 28-03-2018 IPR023214 HAD-like domain AL504_RS08430 ce63ac743f591a3150e283f57d86c2f5 451 SUPERFAMILY SSF102114 3 438 1.96E-133 T 28-03-2018 AL504_RS08430 ce63ac743f591a3150e283f57d86c2f5 451 Pfam PF04055 Radical SAM superfamily 50 220 4.1E-19 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS08430 ce63ac743f591a3150e283f57d86c2f5 451 Pfam PF06969 HemN C-terminal domain 357 424 2.4E-11 T 28-03-2018 IPR010723 HemN, C-terminal AL504_RS08430 ce63ac743f591a3150e283f57d86c2f5 451 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 451 6.7E-163 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL504_RS08430 ce63ac743f591a3150e283f57d86c2f5 451 PIRSF PIRSF000167 2 448 7.1E-161 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL504_RS08430 ce63ac743f591a3150e283f57d86c2f5 451 SMART SM00729 45 263 9.1E-48 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS08430 ce63ac743f591a3150e283f57d86c2f5 451 Gene3D G3DSA:3.20.20.70 24 352 9.1E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS15990 426fcf5aa2cdcfeea6ad176514312883 395 Pfam PF13458 Periplasmic binding protein 31 367 7.1E-71 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS15990 426fcf5aa2cdcfeea6ad176514312883 395 Gene3D G3DSA:3.40.50.2300 16 192 2.4E-29 T 28-03-2018 AL504_RS15990 426fcf5aa2cdcfeea6ad176514312883 395 Gene3D G3DSA:3.40.50.2300 195 355 6.2E-23 T 28-03-2018 AL504_RS15990 426fcf5aa2cdcfeea6ad176514312883 395 SUPERFAMILY SSF53822 32 390 4.21E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS26270 3518b81091003366c159b43e881e6f0a 83 Gene3D G3DSA:3.40.1620.10 3 52 1.4E-6 T 28-03-2018 AL504_RS26270 3518b81091003366c159b43e881e6f0a 83 SUPERFAMILY SSF143120 5 74 1.16E-8 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 Pfam PF16326 ABC transporter C-terminal domain 571 633 6.5E-8 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 ProSitePatterns PS00211 ABC transporters family signature. 435 449 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 SUPERFAMILY SSF52540 298 520 8.63E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 SMART SM00382 26 228 7.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 SMART SM00382 341 508 3.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 Gene3D G3DSA:1.20.58.410 562 641 1.7E-9 T 28-03-2018 AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 Gene3D G3DSA:3.40.50.300 2 278 4.0E-50 T 28-03-2018 AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 SUPERFAMILY SSF52540 2 229 9.28E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 Pfam PF12848 ABC transporter 216 292 5.2E-23 T 28-03-2018 IPR032781 ABC-transporter extension domain AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 Pfam PF00005 ABC transporter 332 463 6.2E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 Pfam PF00005 ABC transporter 17 177 5.6E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS30745 5cedc1351379dd6868f8bc1644651bf9 644 Gene3D G3DSA:3.40.50.300 311 561 9.3E-48 T 28-03-2018 AL504_RS26325 ea10442835ac98b86dec7f41b72f4ad8 202 TIGRFAM TIGR00615 recR: recombination protein RecR 8 200 2.9E-64 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL504_RS26325 ea10442835ac98b86dec7f41b72f4ad8 202 Pfam PF13662 Toprim domain 85 175 5.4E-21 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS26325 ea10442835ac98b86dec7f41b72f4ad8 202 SUPERFAMILY SSF111304 8 201 1.57E-67 T 28-03-2018 IPR023627 Recombination protein RecR AL504_RS26325 ea10442835ac98b86dec7f41b72f4ad8 202 Pfam PF02132 RecR protein 44 82 9.9E-13 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AL504_RS26325 ea10442835ac98b86dec7f41b72f4ad8 202 Gene3D G3DSA:3.40.1360.10 81 174 2.6E-31 T 28-03-2018 AL504_RS26325 ea10442835ac98b86dec7f41b72f4ad8 202 Hamap MF_00017 Recombination protein RecR [recR]. 1 202 87.795 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL504_RS26325 ea10442835ac98b86dec7f41b72f4ad8 202 SMART SM00493 84 169 4.4E-8 T 28-03-2018 IPR006171 TOPRIM domain AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 4.8E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 4.8E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 4.8E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 6.3E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 SUPERFAMILY SSF46785 2 62 4.39E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 5.1E-19 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 SUPERFAMILY SSF54909 65 151 1.09E-17 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 Gene3D G3DSA:1.10.10.10 1 52 3.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 Gene3D G3DSA:3.30.70.920 55 148 6.8E-23 T 28-03-2018 AL504_RS21620 8be42160e74e118c8d7cfca16d1e8dcc 158 SMART SM00344 3 112 3.9E-30 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 209 39.426 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 PIRSF PIRSF000190 1 209 1.8E-83 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 118 2.3E-28 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 Gene3D G3DSA:2.30.110.10 8 209 3.4E-79 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 209 1.8E-86 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 SUPERFAMILY SSF50475 6 209 4.12E-69 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 179 192 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS14075 a1ea9cc3f0fd817d55f8978e011fc06b 209 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 169 209 2.4E-21 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL504_RS00115 47057aaf9a74c53526c74f446afa238e 575 SUPERFAMILY SSF53098 171 368 1.29E-21 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS00115 47057aaf9a74c53526c74f446afa238e 575 Gene3D G3DSA:1.10.10.60 94 156 1.1E-12 T 28-03-2018 AL504_RS00115 47057aaf9a74c53526c74f446afa238e 575 Gene3D G3DSA:3.30.420.10 171 388 1.1E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS00115 47057aaf9a74c53526c74f446afa238e 575 Pfam PF09299 Mu transposase, C-terminal 393 455 1.1E-12 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal AL504_RS00115 47057aaf9a74c53526c74f446afa238e 575 Pfam PF13518 Helix-turn-helix domain 27 84 5.1E-10 T 28-03-2018 AL504_RS00115 47057aaf9a74c53526c74f446afa238e 575 Pfam PF00665 Integrase core domain 174 312 1.7E-24 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL504_RS00115 47057aaf9a74c53526c74f446afa238e 575 Gene3D G3DSA:2.30.30.130 394 457 1.1E-13 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal AL504_RS24145 f191d5d96580bb345e5ec5f35ff0ce29 570 SUPERFAMILY SSF56601 298 567 1.05E-43 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS24145 f191d5d96580bb345e5ec5f35ff0ce29 570 Gene3D G3DSA:3.30.2010.10 117 208 9.6E-7 T 28-03-2018 AL504_RS24145 f191d5d96580bb345e5ec5f35ff0ce29 570 Gene3D G3DSA:3.40.710.10 313 570 1.4E-35 T 28-03-2018 AL504_RS24145 f191d5d96580bb345e5ec5f35ff0ce29 570 Pfam PF05569 BlaR1 peptidase M56 86 238 2.6E-26 T 28-03-2018 IPR008756 Peptidase M56 AL504_RS24145 f191d5d96580bb345e5ec5f35ff0ce29 570 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 372 383 1.6E-7 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS24145 f191d5d96580bb345e5ec5f35ff0ce29 570 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 423 440 1.6E-7 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS24145 f191d5d96580bb345e5ec5f35ff0ce29 570 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 346 565 2.2E-40 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL504_RS06790 687a2d46b345e1a76cf7df8d9dcf944e 663 SUPERFAMILY SSF53649 45 329 5.52E-22 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS06790 687a2d46b345e1a76cf7df8d9dcf944e 663 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 487 649 1.3E-6 T 28-03-2018 AL504_RS06790 687a2d46b345e1a76cf7df8d9dcf944e 663 Gene3D G3DSA:2.60.120.200 422 661 3.1E-17 T 28-03-2018 AL504_RS06790 687a2d46b345e1a76cf7df8d9dcf944e 663 Gene3D G3DSA:3.40.720.10 44 348 4.8E-27 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS06790 687a2d46b345e1a76cf7df8d9dcf944e 663 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 47 118 1.8E-8 T 28-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AL504_RS06790 687a2d46b345e1a76cf7df8d9dcf944e 663 SUPERFAMILY SSF49899 425 655 1.94E-16 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AL504_RS03115 7f2e870df9815cd265d69aadf053cb84 293 Gene3D G3DSA:3.60.15.10 21 255 4.7E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS03115 7f2e870df9815cd265d69aadf053cb84 293 Pfam PF00753 Metallo-beta-lactamase superfamily 42 228 6.0E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS03115 7f2e870df9815cd265d69aadf053cb84 293 SMART SM00849 43 228 9.0E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS03115 7f2e870df9815cd265d69aadf053cb84 293 SUPERFAMILY SSF56281 27 252 1.2E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS27365 014a152388f4e27dec0c9e59d003726f 307 Gene3D G3DSA:3.40.190.10 182 268 1.1E-15 T 28-03-2018 AL504_RS27365 014a152388f4e27dec0c9e59d003726f 307 Gene3D G3DSA:1.10.10.10 2 88 1.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27365 014a152388f4e27dec0c9e59d003726f 307 Gene3D G3DSA:3.40.190.10 91 181 1.4E-9 T 28-03-2018 AL504_RS27365 014a152388f4e27dec0c9e59d003726f 307 SUPERFAMILY SSF46785 1 80 1.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27365 014a152388f4e27dec0c9e59d003726f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS27365 014a152388f4e27dec0c9e59d003726f 307 Pfam PF03466 LysR substrate binding domain 95 294 2.8E-18 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS27365 014a152388f4e27dec0c9e59d003726f 307 SUPERFAMILY SSF53850 92 294 1.99E-34 T 28-03-2018 AL504_RS21655 db9888affdc960451d87118642d3bafd 187 Gene3D G3DSA:3.40.50.1950 2 185 2.7E-50 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL504_RS21655 db9888affdc960451d87118642d3bafd 187 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 179 3.3E-71 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AL504_RS21655 db9888affdc960451d87118642d3bafd 187 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 185 36.662 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AL504_RS21655 db9888affdc960451d87118642d3bafd 187 Pfam PF02441 Flavoprotein 3 165 3.2E-25 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL504_RS21655 db9888affdc960451d87118642d3bafd 187 SUPERFAMILY SSF52507 2 181 8.5E-61 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 Pfam PF03707 Bacterial signalling protein N terminal repeat 183 246 4.1E-11 T 28-03-2018 IPR005330 MHYT domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 171 2.8E-16 T 28-03-2018 IPR005330 MHYT domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 Pfam PF03707 Bacterial signalling protein N terminal repeat 53 110 1.5E-21 T 28-03-2018 IPR005330 MHYT domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 SUPERFAMILY SSF55073 269 426 6.8E-52 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 262 418 1.1E-42 T 28-03-2018 IPR000160 GGDEF domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 SMART SM00052 434 680 2.1E-120 T 28-03-2018 IPR001633 EAL domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 Gene3D G3DSA:3.20.20.450 431 683 3.8E-100 T 28-03-2018 IPR001633 EAL domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 Gene3D G3DSA:3.30.70.270 258 430 8.8E-63 T 28-03-2018 AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 SUPERFAMILY SSF141868 440 684 1.07E-89 T 28-03-2018 IPR001633 EAL domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 Pfam PF00563 EAL domain 441 675 6.1E-74 T 28-03-2018 IPR001633 EAL domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 SMART SM00267 253 424 2.4E-65 T 28-03-2018 IPR000160 GGDEF domain AL504_RS23075 7ead5013d9b735771d2cf36dac184685 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 417 4.9E-49 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08260 78f4aa538d629b01feb76c45d7c6c5e9 287 SUPERFAMILY SSF46689 1 74 2.87E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS08260 78f4aa538d629b01feb76c45d7c6c5e9 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 73 2.6E-7 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL504_RS08260 78f4aa538d629b01feb76c45d7c6c5e9 287 Gene3D G3DSA:1.10.10.10 1 77 3.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08260 78f4aa538d629b01feb76c45d7c6c5e9 287 Gene3D G3DSA:3.40.50.10490 96 281 1.2E-21 T 28-03-2018 AL504_RS08260 78f4aa538d629b01feb76c45d7c6c5e9 287 SUPERFAMILY SSF53697 108 282 6.27E-19 T 28-03-2018 AL504_RS08260 78f4aa538d629b01feb76c45d7c6c5e9 287 Pfam PF01380 SIS domain 129 256 6.2E-16 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS31310 ecc24bdf52f8d178a4a084dfb5303d2b 273 Pfam PF00005 ABC transporter 26 187 1.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS31310 ecc24bdf52f8d178a4a084dfb5303d2b 273 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 258 6.8E-12 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS31310 ecc24bdf52f8d178a4a084dfb5303d2b 273 SUPERFAMILY SSF52540 8 258 8.47E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS31310 ecc24bdf52f8d178a4a084dfb5303d2b 273 SMART SM00382 34 235 2.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS31310 ecc24bdf52f8d178a4a084dfb5303d2b 273 Gene3D G3DSA:3.40.50.300 1 263 1.1E-57 T 28-03-2018 AL504_RS27050 b9ebb53819b477e9b86b7d0dc1059148 503 SUPERFAMILY SSF53335 207 475 1.78E-65 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS27050 b9ebb53819b477e9b86b7d0dc1059148 503 Gene3D G3DSA:1.20.1250.20 1 198 2.3E-6 T 28-03-2018 AL504_RS27050 b9ebb53819b477e9b86b7d0dc1059148 503 SUPERFAMILY SSF103473 2 192 1.57E-7 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS27050 b9ebb53819b477e9b86b7d0dc1059148 503 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 218 481 22.621 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AL504_RS27050 b9ebb53819b477e9b86b7d0dc1059148 503 Pfam PF01564 Spermine/spermidine synthase domain 264 440 1.1E-29 T 28-03-2018 AL504_RS27050 b9ebb53819b477e9b86b7d0dc1059148 503 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 285 298 - T 28-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AL504_RS27050 b9ebb53819b477e9b86b7d0dc1059148 503 Gene3D G3DSA:3.40.50.150 262 478 2.4E-37 T 28-03-2018 AL504_RS19290 74bcacb79525f549d618510d9a20fc58 302 SMART SM00062 35 269 2.5E-41 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS19290 74bcacb79525f549d618510d9a20fc58 302 SUPERFAMILY SSF53850 1 270 2.51E-54 T 28-03-2018 AL504_RS19290 74bcacb79525f549d618510d9a20fc58 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 267 1.1E-41 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS19290 74bcacb79525f549d618510d9a20fc58 302 Gene3D G3DSA:3.40.190.10 151 280 5.0E-12 T 28-03-2018 AL504_RS19290 74bcacb79525f549d618510d9a20fc58 302 Gene3D G3DSA:3.40.190.10 3 150 1.0E-25 T 28-03-2018 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 Pfam PF00072 Response regulator receiver domain 6 121 7.3E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.3E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.3E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.3E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 7.3E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 SUPERFAMILY SSF52172 3 134 4.98E-24 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 SMART SM00448 4 121 1.6E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 SMART SM00421 152 209 2.2E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 Gene3D G3DSA:3.40.50.2300 3 130 1.9E-26 T 28-03-2018 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 SUPERFAMILY SSF46894 147 215 4.42E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS24555 67b5a8de904bb46b91111dce85596398 216 Gene3D G3DSA:1.10.10.10 131 216 9.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 SMART SM00028 399 432 2.3E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 Gene3D G3DSA:1.25.40.10 412 464 5.7E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 Gene3D G3DSA:1.25.40.10 366 411 1.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 Gene3D G3DSA:3.40.50.150 66 255 2.9E-38 T 28-03-2018 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 SUPERFAMILY SSF53335 67 252 3.41E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 Pfam PF13181 Tetratricopeptide repeat 399 432 1.4E-5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 SUPERFAMILY SSF47757 7 64 6.15E-5 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 PRINTS PR00996 Glutamate methyltransferase family signature 202 216 7.2E-21 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 PRINTS PR00996 Glutamate methyltransferase family signature 133 149 7.2E-21 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 7.2E-21 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 PRINTS PR00996 Glutamate methyltransferase family signature 100 120 7.2E-21 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 PRINTS PR00996 Glutamate methyltransferase family signature 221 244 7.2E-21 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 Gene3D G3DSA:1.10.155.10 2 64 1.8E-6 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 Pfam PF01739 CheR methyltransferase, SAM binding domain 68 243 3.6E-36 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 SUPERFAMILY SSF48452 367 459 1.54E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS01540 802bffaf1e14fe850dccae1697ded041 467 SMART SM00138 1 262 1.1E-33 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL504_RS02145 b0f5d16d87c845172d1897cc0a8aa4e6 222 Gene3D G3DSA:3.40.50.1000 5 32 0.28 T 28-03-2018 IPR023214 HAD-like domain AL504_RS02145 b0f5d16d87c845172d1897cc0a8aa4e6 222 Gene3D G3DSA:1.10.150.240 33 78 2.3E-15 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL504_RS02145 b0f5d16d87c845172d1897cc0a8aa4e6 222 SUPERFAMILY SSF56784 6 222 6.51E-51 T 28-03-2018 IPR023214 HAD-like domain AL504_RS02145 b0f5d16d87c845172d1897cc0a8aa4e6 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 4.9E-25 T 28-03-2018 IPR023214 HAD-like domain AL504_RS02145 b0f5d16d87c845172d1897cc0a8aa4e6 222 Gene3D G3DSA:3.40.50.1000 79 222 1.2E-27 T 28-03-2018 IPR023214 HAD-like domain AL504_RS02145 b0f5d16d87c845172d1897cc0a8aa4e6 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 189 1.0E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS27450 07a0badf6c6a0180760f38f487392c47 420 Pfam PF03600 Citrate transporter 41 341 2.8E-27 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL504_RS27450 07a0badf6c6a0180760f38f487392c47 420 PRINTS PR00758 Arsenical pump membrane protein signature 107 131 2.2E-16 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AL504_RS27450 07a0badf6c6a0180760f38f487392c47 420 PRINTS PR00758 Arsenical pump membrane protein signature 358 383 2.2E-16 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AL504_RS27450 07a0badf6c6a0180760f38f487392c47 420 PRINTS PR00758 Arsenical pump membrane protein signature 276 300 2.2E-16 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AL504_RS12485 5b5f3b34e450f7ff943e6a2de5113fbc 1399 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.7E-8 T 28-03-2018 IPR024973 ESPR domain AL504_RS12485 5b5f3b34e450f7ff943e6a2de5113fbc 1399 Gene3D G3DSA:2.160.20.10 64 359 1.9E-61 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS12485 5b5f3b34e450f7ff943e6a2de5113fbc 1399 SUPERFAMILY SSF51126 91 359 9.42E-50 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS12485 5b5f3b34e450f7ff943e6a2de5113fbc 1399 SMART SM00912 68 180 8.5E-38 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS12485 5b5f3b34e450f7ff943e6a2de5113fbc 1399 Pfam PF05860 haemagglutination activity domain 80 179 2.2E-24 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS12485 5b5f3b34e450f7ff943e6a2de5113fbc 1399 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 103 176 6.6E-25 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS08700 906242afab082f4bcd7780a2ee024109 280 Pfam PF08666 SAF domain 55 112 4.8E-7 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS08700 906242afab082f4bcd7780a2ee024109 280 SMART SM00858 52 116 1.5E-4 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS08700 906242afab082f4bcd7780a2ee024109 280 Gene3D G3DSA:3.90.1210.10 54 115 4.7E-12 T 28-03-2018 AL504_RS08700 906242afab082f4bcd7780a2ee024109 280 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 16 251 3.0E-31 T 28-03-2018 IPR017592 Pilus assembly, Flp-type CpaB AL504_RS08700 906242afab082f4bcd7780a2ee024109 280 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 125 221 5.5E-10 T 28-03-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AL504_RS08950 1a6f2558f8a3f70aaf32e229a2136c8b 437 Pfam PF13391 HNH endonuclease 323 374 2.8E-7 T 28-03-2018 IPR003615 HNH nuclease AL504_RS29105 1476b2ac28164de86bdfd43bacbf65e6 168 Gene3D G3DSA:1.20.1260.10 1 165 4.7E-29 T 28-03-2018 IPR012347 Ferritin-related AL504_RS29105 1476b2ac28164de86bdfd43bacbf65e6 168 Pfam PF05974 Domain of unknown function (DUF892) 5 162 1.2E-60 T 28-03-2018 IPR010287 Domain of unknown function DUF892 AL504_RS29105 1476b2ac28164de86bdfd43bacbf65e6 168 SUPERFAMILY SSF47240 1 152 3.71E-55 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS20505 e2f60aeb9172707c1b976474b8250329 90 SUPERFAMILY SSF117991 6 90 2.22E-26 T 28-03-2018 IPR027471 YbeD-like domain AL504_RS20505 e2f60aeb9172707c1b976474b8250329 90 Gene3D G3DSA:3.30.70.260 6 90 6.7E-30 T 28-03-2018 AL504_RS20505 e2f60aeb9172707c1b976474b8250329 90 Pfam PF04359 Protein of unknown function (DUF493) 8 90 2.0E-29 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 AL504_RS20505 e2f60aeb9172707c1b976474b8250329 90 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 2 90 21.022 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 SUPERFAMILY SSF56801 4 521 8.24E-110 T 28-03-2018 AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 Gene3D G3DSA:3.30.300.30 415 527 4.2E-23 T 28-03-2018 AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 Gene3D G3DSA:3.40.50.980 2 170 6.6E-31 T 28-03-2018 AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 Gene3D G3DSA:2.30.38.10 325 413 1.2E-19 T 28-03-2018 AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 510 2.2E-15 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 Gene3D G3DSA:3.40.50.980 171 324 3.1E-30 T 28-03-2018 AL504_RS13920 b58b3caced257d03a05b1ea8fc75a6d1 543 Pfam PF00501 AMP-binding enzyme 35 420 1.3E-67 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS03000 86cf0d452a7a3caff4fdf25fe3ab4439 401 SUPERFAMILY SSF53383 29 390 9.22E-86 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03000 86cf0d452a7a3caff4fdf25fe3ab4439 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 390 2.8E-98 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03000 86cf0d452a7a3caff4fdf25fe3ab4439 401 PIRSF PIRSF001434 1 394 2.1E-121 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03000 86cf0d452a7a3caff4fdf25fe3ab4439 401 Gene3D G3DSA:3.40.640.10 6 262 6.1E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS03000 86cf0d452a7a3caff4fdf25fe3ab4439 401 Gene3D G3DSA:3.90.1150.10 264 400 1.5E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS03000 86cf0d452a7a3caff4fdf25fe3ab4439 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 10 390 5.6E-115 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL504_RS15290 6528f162e4d06baaa57ed67a8e6355be 396 Pfam PF04392 ABC transporter substrate binding protein 137 392 7.4E-17 T 28-03-2018 IPR007487 ABC transporter, substrate-binding protein AL504_RS15290 6528f162e4d06baaa57ed67a8e6355be 396 Gene3D G3DSA:3.40.50.2300 55 209 1.2E-7 T 28-03-2018 AL504_RS15290 6528f162e4d06baaa57ed67a8e6355be 396 Gene3D G3DSA:3.40.50.2300 210 361 6.3E-6 T 28-03-2018 AL504_RS05445 9c7b334013eae29c174fce3c878ca20b 102 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 4 102 3.5E-38 T 28-03-2018 IPR018678 Protein of unknown function DUF2160, transmembrane AL504_RS25075 1ec09a22e692219a4270b74ee97a71e1 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 4.1E-65 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS25075 1ec09a22e692219a4270b74ee97a71e1 261 Gene3D G3DSA:3.40.190.10 134 251 3.2E-30 T 28-03-2018 AL504_RS25075 1ec09a22e692219a4270b74ee97a71e1 261 SUPERFAMILY SSF53850 7 256 7.26E-70 T 28-03-2018 AL504_RS25075 1ec09a22e692219a4270b74ee97a71e1 261 Gene3D G3DSA:3.40.190.10 18 133 1.4E-32 T 28-03-2018 AL504_RS25075 1ec09a22e692219a4270b74ee97a71e1 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS25075 1ec09a22e692219a4270b74ee97a71e1 261 SMART SM00062 35 256 4.4E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 Gene3D G3DSA:3.90.20.20 22 125 4.3E-25 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 ProSitePatterns PS01071 grpE protein signature. 138 180 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 Hamap MF_01151 Protein GrpE [grpE]. 5 182 19.309 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 SUPERFAMILY SSF58014 31 124 1.83E-23 T 28-03-2018 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 PRINTS PR00773 GrpE protein signature 161 180 5.4E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 PRINTS PR00773 GrpE protein signature 54 70 5.4E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 PRINTS PR00773 GrpE protein signature 82 97 5.4E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 PRINTS PR00773 GrpE protein signature 135 150 5.4E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 Pfam PF01025 GrpE 24 181 1.1E-47 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 SUPERFAMILY SSF51064 131 183 1.01E-15 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL504_RS13445 761e5badd8a8541414155f4a8fc08a62 185 Gene3D G3DSA:2.30.22.10 127 185 3.3E-20 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL504_RS19350 5f5c62b5a2ba2a444f751f4a27ab7c46 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.935 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19350 5f5c62b5a2ba2a444f751f4a27ab7c46 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 6.0E-16 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19350 5f5c62b5a2ba2a444f751f4a27ab7c46 44 Pfam PF00468 Ribosomal protein L34 1 44 8.0E-23 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19350 5f5c62b5a2ba2a444f751f4a27ab7c46 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19350 5f5c62b5a2ba2a444f751f4a27ab7c46 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.5E-24 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS11500 f388caae1c080e9161b2a1388c9ec38e 379 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 375 2.3E-153 T 28-03-2018 IPR007434 Peptidogalycan biosysnthesis/recognition AL504_RS11500 f388caae1c080e9161b2a1388c9ec38e 379 Gene3D G3DSA:3.40.630.30 179 332 4.7E-37 T 28-03-2018 AL504_RS11500 f388caae1c080e9161b2a1388c9ec38e 379 Gene3D G3DSA:3.40.630.30 11 178 1.1E-20 T 28-03-2018 AL504_RS11500 f388caae1c080e9161b2a1388c9ec38e 379 SUPERFAMILY SSF55729 177 350 6.89E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS05885 233714814ae3c7c8eae40b9d61d5d3a7 386 Pfam PF13433 Periplasmic binding protein domain 14 376 6.0E-131 T 28-03-2018 AL504_RS05885 233714814ae3c7c8eae40b9d61d5d3a7 386 Gene3D G3DSA:3.40.50.2300 140 317 2.5E-34 T 28-03-2018 AL504_RS05885 233714814ae3c7c8eae40b9d61d5d3a7 386 SUPERFAMILY SSF53822 15 379 1.11E-89 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS05885 233714814ae3c7c8eae40b9d61d5d3a7 386 Gene3D G3DSA:3.40.50.2300 2 139 2.2E-15 T 28-03-2018 AL504_RS23050 35f13eb77c96d38b8f52de8f9615acf0 501 Pfam PF07171 MlrC C-terminus 304 481 2.5E-56 T 28-03-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal AL504_RS23050 35f13eb77c96d38b8f52de8f9615acf0 501 PIRSF PIRSF012702 1 500 2.6E-182 T 28-03-2018 IPR009197 Microcystin LR degradation protein MlrC AL504_RS23050 35f13eb77c96d38b8f52de8f9615acf0 501 Gene3D G3DSA:3.20.20.70 70 355 1.3E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS23050 35f13eb77c96d38b8f52de8f9615acf0 501 Pfam PF07364 Metallopeptidase family M81 2 292 1.5E-107 T 28-03-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 365 384 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 PIRSF PIRSF000774 7 478 6.2E-147 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 PRINTS PR00045 Sigma-54 factor signature 181 198 5.0E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 PRINTS PR00045 Sigma-54 factor signature 377 389 5.0E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 PRINTS PR00045 Sigma-54 factor signature 451 469 5.0E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 PRINTS PR00045 Sigma-54 factor signature 393 404 5.0E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 Pfam PF04552 Sigma-54, DNA binding domain 320 475 2.1E-62 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 Gene3D G3DSA:1.10.10.10 324 410 3.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 18 475 6.7E-132 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 456 463 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 12 55 6.6E-16 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL504_RS18530 34d43be5903467e99da0b6e2c1ae0544 481 Pfam PF04963 Sigma-54 factor, core binding domain 108 305 3.9E-52 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AL504_RS24335 b35b3d064d1bbae6745f930ffb949fcc 242 Pfam PF01925 Sulfite exporter TauE/SafE 10 237 1.2E-29 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS07160 0f97024a728509c1190d05070831a52d 402 Pfam PF07690 Major Facilitator Superfamily 28 279 7.9E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS07160 0f97024a728509c1190d05070831a52d 402 SUPERFAMILY SSF103473 25 392 6.8E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS07160 0f97024a728509c1190d05070831a52d 402 Gene3D G3DSA:1.20.1250.20 211 395 1.5E-19 T 28-03-2018 AL504_RS07160 0f97024a728509c1190d05070831a52d 402 Gene3D G3DSA:1.20.1250.20 23 210 8.1E-24 T 28-03-2018 AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 150 166 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 SUPERFAMILY SSF53901 10 232 1.7E-29 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 94 232 7.2E-19 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 242 335 1.3E-23 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 SUPERFAMILY SSF53901 206 397 1.68E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 Gene3D G3DSA:3.40.47.10 9 243 5.6E-29 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 Gene3D G3DSA:3.40.47.10 246 400 8.3E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS08035 4bd06dd341f2d391bbf3b21fcbf58bf4 400 SMART SM00825 Beta-ketoacyl synthase 10 397 7.1E-9 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL504_RS22140 ecfd896bcce71d9bd73a6791eb05d9a6 157 Pfam PF06222 Phage tail assembly chaperone 14 140 5.2E-27 T 28-03-2018 IPR010411 Bacteriophage tail assembly protein, Gp13/14 AL504_RS08875 6ed7b2dff0864d20ed50c7b45384c6a2 319 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 80 318 7.7E-73 T 28-03-2018 IPR020049 Protein of unknown function DUF2184 AL504_RS08875 6ed7b2dff0864d20ed50c7b45384c6a2 319 PIRSF PIRSF029202 25 318 1.0E-52 T 28-03-2018 IPR020049 Protein of unknown function DUF2184 AL504_RS18900 bf5b2ac06d7d1d7cf70e57284a75515a 155 Gene3D G3DSA:1.10.10.10 85 150 2.0E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18900 bf5b2ac06d7d1d7cf70e57284a75515a 155 Pfam PF08281 Sigma-70, region 4 96 149 9.4E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18900 bf5b2ac06d7d1d7cf70e57284a75515a 155 SUPERFAMILY SSF88659 74 150 8.6E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18900 bf5b2ac06d7d1d7cf70e57284a75515a 155 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 149 6.5E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18900 bf5b2ac06d7d1d7cf70e57284a75515a 155 SUPERFAMILY SSF88946 2 63 5.49E-7 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18900 bf5b2ac06d7d1d7cf70e57284a75515a 155 Pfam PF04542 Sigma-70 region 2 2 65 3.0E-5 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS18900 bf5b2ac06d7d1d7cf70e57284a75515a 155 Gene3D G3DSA:1.10.1740.10 1 70 1.8E-7 T 28-03-2018 AL504_RS04240 1cc276abb735f8efaf7b93319ba9d32c 237 Pfam PF02308 MgtC family 19 139 3.6E-34 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS04240 1cc276abb735f8efaf7b93319ba9d32c 237 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.1E-39 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS04240 1cc276abb735f8efaf7b93319ba9d32c 237 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.1E-39 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS04240 1cc276abb735f8efaf7b93319ba9d32c 237 PRINTS PR01837 MgtC/SapB protein signature 67 89 1.1E-39 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS04240 1cc276abb735f8efaf7b93319ba9d32c 237 PRINTS PR01837 MgtC/SapB protein signature 94 118 1.1E-39 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS04295 2cbe70f9c0c4b1f4b763eb7fa7c400da 182 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 175 2.4E-50 T 28-03-2018 IPR006286 Peptidase C56, PfpI AL504_RS04295 2cbe70f9c0c4b1f4b763eb7fa7c400da 182 Gene3D G3DSA:3.40.50.880 1 181 2.2E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS04295 2cbe70f9c0c4b1f4b763eb7fa7c400da 182 SUPERFAMILY SSF52317 9 177 5.16E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS04295 2cbe70f9c0c4b1f4b763eb7fa7c400da 182 Pfam PF01965 DJ-1/PfpI family 10 174 2.2E-52 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS05600 ea6db3117289f4f505070730fc55452d 473 Pfam PF02321 Outer membrane efflux protein 290 463 3.2E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS05600 ea6db3117289f4f505070730fc55452d 473 Pfam PF02321 Outer membrane efflux protein 68 259 1.3E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS05600 ea6db3117289f4f505070730fc55452d 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 470 1.9E-90 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS05600 ea6db3117289f4f505070730fc55452d 473 SUPERFAMILY SSF56954 3 28 2.09E-100 T 28-03-2018 AL504_RS05600 ea6db3117289f4f505070730fc55452d 473 SUPERFAMILY SSF56954 59 472 2.09E-100 T 28-03-2018 AL504_RS05600 ea6db3117289f4f505070730fc55452d 473 Gene3D G3DSA:1.20.1600.10 18 473 1.4E-91 T 28-03-2018 AL504_RS08655 c2c78be9e642426acdd34e91a0c1e16d 437 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 26 318 22.858 T 28-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AL504_RS08655 c2c78be9e642426acdd34e91a0c1e16d 437 Pfam PF03631 Virulence factor BrkB 41 286 3.4E-57 T 28-03-2018 IPR017039 Virulence factor BrkB AL504_RS08655 c2c78be9e642426acdd34e91a0c1e16d 437 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 35 286 1.1E-71 T 28-03-2018 IPR017039 Virulence factor BrkB AL504_RS08655 c2c78be9e642426acdd34e91a0c1e16d 437 Gene3D G3DSA:1.10.10.10 295 380 5.2E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30565 1a945909a9532732130ca2410eb6aee4 207 SUPERFAMILY SSF47616 79 199 2.05E-34 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS30565 1a945909a9532732130ca2410eb6aee4 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 9 75 6.1E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS30565 1a945909a9532732130ca2410eb6aee4 207 Gene3D G3DSA:1.20.1050.10 96 206 2.2E-30 T 28-03-2018 AL504_RS30565 1a945909a9532732130ca2410eb6aee4 207 Gene3D G3DSA:3.40.30.10 1 95 1.4E-31 T 28-03-2018 AL504_RS30565 1a945909a9532732130ca2410eb6aee4 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 192 7.4E-13 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS30565 1a945909a9532732130ca2410eb6aee4 207 SUPERFAMILY SSF52833 3 79 1.17E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS18885 4ff846480044a329534f0099c6714123 462 Gene3D G3DSA:3.40.50.300 5 279 1.3E-21 T 28-03-2018 AL504_RS18885 4ff846480044a329534f0099c6714123 462 Gene3D G3DSA:3.40.50.300 280 447 1.3E-16 T 28-03-2018 AL504_RS18885 4ff846480044a329534f0099c6714123 462 Pfam PF13361 UvrD-like helicase C-terminal domain 351 440 2.7E-11 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL504_RS18885 4ff846480044a329534f0099c6714123 462 Pfam PF13245 AAA domain 21 253 3.9E-7 T 28-03-2018 AL504_RS18885 4ff846480044a329534f0099c6714123 462 SUPERFAMILY SSF52540 9 441 1.95E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07945 1f69fc612651cec8c9a17d0c9ab57024 304 SUPERFAMILY SSF103481 41 138 1.44E-13 T 28-03-2018 AL504_RS07945 1f69fc612651cec8c9a17d0c9ab57024 304 SUPERFAMILY SSF103481 186 285 1.24E-11 T 28-03-2018 AL504_RS07945 1f69fc612651cec8c9a17d0c9ab57024 304 Pfam PF00892 EamA-like transporter family 151 283 1.7E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS07945 1f69fc612651cec8c9a17d0c9ab57024 304 Pfam PF00892 EamA-like transporter family 3 135 4.5E-23 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS00275 60b89f8199d6f493ac0a17f017ad97cb 551 Pfam PF00884 Sulfatase 47 376 5.9E-61 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL504_RS00275 60b89f8199d6f493ac0a17f017ad97cb 551 Gene3D G3DSA:3.40.720.10 273 414 1.6E-28 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS00275 60b89f8199d6f493ac0a17f017ad97cb 551 Gene3D G3DSA:3.40.720.10 43 272 7.4E-51 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS00275 60b89f8199d6f493ac0a17f017ad97cb 551 SUPERFAMILY SSF53649 44 486 1.31E-117 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS00275 60b89f8199d6f493ac0a17f017ad97cb 551 Gene3D G3DSA:3.30.1120.10 415 499 1.2E-17 T 28-03-2018 AL504_RS27925 3ff70ca7a13293101b3fa5b0853936e0 335 Gene3D G3DSA:3.40.190.10 36 147 1.4E-13 T 28-03-2018 AL504_RS27925 3ff70ca7a13293101b3fa5b0853936e0 335 Pfam PF09084 NMT1/THI5 like 53 272 2.9E-23 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS27925 3ff70ca7a13293101b3fa5b0853936e0 335 Gene3D G3DSA:3.40.190.10 148 334 5.9E-22 T 28-03-2018 AL504_RS27925 3ff70ca7a13293101b3fa5b0853936e0 335 SUPERFAMILY SSF53850 40 273 1.49E-36 T 28-03-2018 AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 174 1.2E-37 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 Pfam PF12833 Helix-turn-helix domain 209 284 1.3E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 SUPERFAMILY SSF46689 186 237 3.36E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 Gene3D G3DSA:1.10.10.60 243 298 8.1E-10 T 28-03-2018 AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 Gene3D G3DSA:1.10.10.60 185 242 1.7E-13 T 28-03-2018 AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 SUPERFAMILY SSF46689 239 290 3.23E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS23620 052dd432a3128c626d0a5888cf16b4e6 298 SMART SM00342 203 286 2.2E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS12740 7605c2ba62b3d8d3e40a3534f3232e9f 314 SUPERFAMILY SSF161098 89 298 4.09E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS12740 7605c2ba62b3d8d3e40a3534f3232e9f 314 Gene3D G3DSA:1.10.3720.10 3 301 1.7E-40 T 28-03-2018 AL504_RS12740 7605c2ba62b3d8d3e40a3534f3232e9f 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 4.1E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 Gene3D G3DSA:3.40.50.2300 180 341 3.4E-42 T 28-03-2018 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 Pfam PF13377 Periplasmic binding protein-like domain 181 341 1.1E-31 T 28-03-2018 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 SUPERFAMILY SSF47413 13 71 6.84E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 SUPERFAMILY SSF53822 70 329 7.61E-57 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 Gene3D G3DSA:1.10.260.40 29 69 4.8E-20 T 28-03-2018 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 SMART SM00354 13 83 1.6E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 Gene3D G3DSA:3.40.50.2300 70 179 5.5E-28 T 28-03-2018 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 60 8.1E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 28-03-2018 AL504_RS08505 eb626f0c50f398db247a42c476816fad 341 Gene3D G3DSA:1.10.10.10 7 28 5.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20265 597395dd71a6850572418d5341ad34ec 289 SUPERFAMILY SSF103481 38 140 4.84E-19 T 28-03-2018 AL504_RS20265 597395dd71a6850572418d5341ad34ec 289 Pfam PF00892 EamA-like transporter family 150 281 2.9E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS20265 597395dd71a6850572418d5341ad34ec 289 Pfam PF00892 EamA-like transporter family 9 136 5.6E-24 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS20265 597395dd71a6850572418d5341ad34ec 289 SUPERFAMILY SSF103481 185 281 4.32E-13 T 28-03-2018 AL504_RS09350 10dadcdd4d9b9e51458d12b3e50a5839 168 Gene3D G3DSA:1.10.760.10 3 140 5.5E-8 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS09350 10dadcdd4d9b9e51458d12b3e50a5839 168 SUPERFAMILY SSF46626 44 134 3.49E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 PIRSF PIRSF036979 30 316 5.4E-28 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 Pfam PF00491 Arginase family 44 313 8.8E-58 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 Gene3D G3DSA:3.40.800.10 1 316 8.1E-75 T 28-03-2018 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 PRINTS PR00116 Arginase signature 241 270 4.2E-5 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 PRINTS PR00116 Arginase signature 122 137 4.2E-5 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 SUPERFAMILY SSF52768 13 315 8.82E-75 T 28-03-2018 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 Hamap MF_00737 Formimidoylglutamase [hutG]. 6 315 40.749 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 ProSitePatterns PS01053 Arginase family signature. 244 265 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL504_RS02280 6800e737ceaf5f7681ac4e36bbf7d0e8 316 TIGRFAM TIGR01227 hutG: formimidoylglutamase 11 314 1.0E-84 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL504_RS29675 bdb4a99f8d4212f27cbe9979ac1246e1 135 Gene3D G3DSA:3.40.1580.10 1 134 9.7E-11 T 28-03-2018 AL504_RS29675 bdb4a99f8d4212f27cbe9979ac1246e1 135 Pfam PF14568 SMI1-KNR4 cell-wall 21 128 5.5E-10 T 28-03-2018 AL504_RS29675 bdb4a99f8d4212f27cbe9979ac1246e1 135 SUPERFAMILY SSF160631 11 130 6.54E-14 T 28-03-2018 AL504_RS25895 049b031a693753a63e00d21601dc49e6 143 SUPERFAMILY SSF51316 1 133 3.56E-47 T 28-03-2018 IPR011057 Mss4-like AL504_RS25895 049b031a693753a63e00d21601dc49e6 143 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 111 5.0E-19 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL504_RS25895 049b031a693753a63e00d21601dc49e6 143 Gene3D G3DSA:3.90.1590.10 1 142 5.0E-40 T 28-03-2018 AL504_RS05105 399f1a414e8366196ef60a3491da673c 249 Gene3D G3DSA:3.20.20.190 9 249 9.8E-61 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL504_RS05105 399f1a414e8366196ef60a3491da673c 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 16 242 3.1E-38 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL504_RS05105 399f1a414e8366196ef60a3491da673c 249 SUPERFAMILY SSF51695 12 246 3.66E-63 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL504_RS19840 d1546f942f843f09fdbc32ee79c8c9f6 241 Pfam PF10945 Cellulose biosynthesis protein BcsR 4 41 1.1E-4 T 28-03-2018 IPR024487 Cellulose biosynthesis protein BcsR AL504_RS19910 a38c83db0e7dea1329817d23b4a451d7 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS19910 a38c83db0e7dea1329817d23b4a451d7 250 SUPERFAMILY SSF52540 6 234 6.3E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19910 a38c83db0e7dea1329817d23b4a451d7 250 Pfam PF00005 ABC transporter 22 172 5.3E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19910 a38c83db0e7dea1329817d23b4a451d7 250 SMART SM00382 31 221 2.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19910 a38c83db0e7dea1329817d23b4a451d7 250 Gene3D G3DSA:3.40.50.300 3 244 3.6E-52 T 28-03-2018 AL504_RS05630 77cda8b8748e937e06c07acad72f798b 242 Gene3D G3DSA:3.40.50.1820 11 222 1.1E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS05630 77cda8b8748e937e06c07acad72f798b 242 Pfam PF02230 Phospholipase/Carboxylesterase 20 219 1.3E-30 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AL504_RS05630 77cda8b8748e937e06c07acad72f798b 242 SUPERFAMILY SSF53474 18 218 4.82E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24250 22ac2dee65ab5babf3b8901eb7f68d7c 683 Gene3D G3DSA:2.170.130.10 9 148 7.2E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24250 22ac2dee65ab5babf3b8901eb7f68d7c 683 Gene3D G3DSA:2.40.170.20 149 682 8.1E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24250 22ac2dee65ab5babf3b8901eb7f68d7c 683 Pfam PF07715 TonB-dependent Receptor Plug Domain 32 138 7.2E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS24250 22ac2dee65ab5babf3b8901eb7f68d7c 683 Pfam PF00593 TonB dependent receptor 261 682 1.3E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24250 22ac2dee65ab5babf3b8901eb7f68d7c 683 SUPERFAMILY SSF56935 7 683 7.33E-110 T 28-03-2018 AL504_RS03035 2ecbb32116ac08beca69e1c5c51baab4 220 Pfam PF16357 Putative PepSY_TM-like 24 212 3.8E-12 T 28-03-2018 IPR032307 Putative PepSY TM-like protein AL504_RS09900 7e7d72298b11a08ba6a2f64f4e3f48a6 251 Pfam PF00535 Glycosyl transferase family 2 4 120 4.2E-18 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS09900 7e7d72298b11a08ba6a2f64f4e3f48a6 251 Gene3D G3DSA:3.90.550.10 1 222 4.4E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS09900 7e7d72298b11a08ba6a2f64f4e3f48a6 251 SUPERFAMILY SSF53448 1 146 9.64E-29 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS18290 76bb32ba40bf05ae17e4d3c624924f39 455 SUPERFAMILY SSF103473 10 430 2.62E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS18290 76bb32ba40bf05ae17e4d3c624924f39 455 Gene3D G3DSA:1.20.1250.20 11 211 1.3E-37 T 28-03-2018 AL504_RS18290 76bb32ba40bf05ae17e4d3c624924f39 455 Gene3D G3DSA:1.20.1250.20 232 445 4.3E-20 T 28-03-2018 AL504_RS18290 76bb32ba40bf05ae17e4d3c624924f39 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS18290 76bb32ba40bf05ae17e4d3c624924f39 455 Pfam PF07690 Major Facilitator Superfamily 27 316 1.5E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS17940 16900220695a90d9757d1a2c96438053 278 SUPERFAMILY SSF52540 13 242 1.89E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17940 16900220695a90d9757d1a2c96438053 278 Pfam PF00005 ABC transporter 28 177 4.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17940 16900220695a90d9757d1a2c96438053 278 SMART SM00382 37 225 6.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17940 16900220695a90d9757d1a2c96438053 278 Gene3D G3DSA:3.40.50.300 10 272 5.1E-62 T 28-03-2018 AL504_RS17940 16900220695a90d9757d1a2c96438053 278 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS30070 d870211029f25ce4f41831c13fadc684 408 Gene3D G3DSA:1.20.1250.20 206 408 2.9E-22 T 28-03-2018 AL504_RS30070 d870211029f25ce4f41831c13fadc684 408 Gene3D G3DSA:1.20.1250.20 9 205 1.2E-15 T 28-03-2018 AL504_RS30070 d870211029f25ce4f41831c13fadc684 408 SUPERFAMILY SSF103473 11 396 3.92E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS30070 d870211029f25ce4f41831c13fadc684 408 Pfam PF07690 Major Facilitator Superfamily 263 396 2.9E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS30070 d870211029f25ce4f41831c13fadc684 408 Pfam PF07690 Major Facilitator Superfamily 22 241 1.2E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS14015 e4bce615507ce9bd5a4c86077dbc2858 314 Pfam PF04773 FecR protein 106 200 1.3E-21 T 28-03-2018 IPR006860 FecR protein AL504_RS14015 e4bce615507ce9bd5a4c86077dbc2858 314 Pfam PF16220 Domain of unknown function (DUF4880) 2 43 5.4E-12 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS14015 e4bce615507ce9bd5a4c86077dbc2858 314 PIRSF PIRSF018266 1 314 4.6E-87 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS13850 db99f5299ae979cfa8051ef46aa4290a 308 Pfam PF00892 EamA-like transporter family 162 291 4.6E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS13850 db99f5299ae979cfa8051ef46aa4290a 308 Pfam PF00892 EamA-like transporter family 16 146 1.4E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS13850 db99f5299ae979cfa8051ef46aa4290a 308 SUPERFAMILY SSF103481 55 149 2.48E-14 T 28-03-2018 AL504_RS13850 db99f5299ae979cfa8051ef46aa4290a 308 SUPERFAMILY SSF103481 196 295 2.75E-15 T 28-03-2018 AL504_RS01655 16690ed61ec9e02e7c7290865f402505 742 Gene3D G3DSA:2.40.170.20 189 742 3.4E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS01655 16690ed61ec9e02e7c7290865f402505 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 180 1.0E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS01655 16690ed61ec9e02e7c7290865f402505 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS01655 16690ed61ec9e02e7c7290865f402505 742 SUPERFAMILY SSF56935 50 742 1.61E-107 T 28-03-2018 AL504_RS01655 16690ed61ec9e02e7c7290865f402505 742 Gene3D G3DSA:2.170.130.10 49 188 2.3E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS01655 16690ed61ec9e02e7c7290865f402505 742 Pfam PF00593 TonB dependent receptor 289 740 4.3E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS24805 d34dd3934ce778aed34955c9ad783542 317 PIRSF PIRSF018266 2 317 3.3E-98 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS24805 d34dd3934ce778aed34955c9ad783542 317 Pfam PF04773 FecR protein 109 203 5.6E-20 T 28-03-2018 IPR006860 FecR protein AL504_RS24805 d34dd3934ce778aed34955c9ad783542 317 Pfam PF16220 Domain of unknown function (DUF4880) 11 53 5.4E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS31140 b761a1f0eec1f1b74928293e487ff8e8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.2E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS31140 b761a1f0eec1f1b74928293e487ff8e8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.2E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS31140 b761a1f0eec1f1b74928293e487ff8e8 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 4.0E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS31140 b761a1f0eec1f1b74928293e487ff8e8 193 SUPERFAMILY SSF48498 83 191 2.05E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS31140 b761a1f0eec1f1b74928293e487ff8e8 193 SUPERFAMILY SSF46689 3 87 9.23E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS31140 b761a1f0eec1f1b74928293e487ff8e8 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS31140 b761a1f0eec1f1b74928293e487ff8e8 193 Gene3D G3DSA:1.10.357.10 1 193 4.8E-42 T 28-03-2018 AL504_RS20390 5ebb64bfbd629cd39fc204c0f4257967 395 SUPERFAMILY SSF53383 34 391 2.86E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS20390 5ebb64bfbd629cd39fc204c0f4257967 395 PIRSF PIRSF000390 24 395 5.5E-95 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS20390 5ebb64bfbd629cd39fc204c0f4257967 395 Gene3D G3DSA:3.90.1150.10 277 394 4.4E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS20390 5ebb64bfbd629cd39fc204c0f4257967 395 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 38 393 1.4E-92 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL504_RS20390 5ebb64bfbd629cd39fc204c0f4257967 395 Gene3D G3DSA:3.40.640.10 27 276 5.2E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS20390 5ebb64bfbd629cd39fc204c0f4257967 395 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 27 387 4.4E-161 T 28-03-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family AL504_RS27880 ad85f402e4c9fdbf896ed050b71ccd1f 72 Pfam PF07311 Dodecin 5 68 5.1E-31 T 28-03-2018 IPR009923 Dodecin AL504_RS27880 ad85f402e4c9fdbf896ed050b71ccd1f 72 SUPERFAMILY SSF89807 3 68 1.44E-26 T 28-03-2018 IPR009923 Dodecin AL504_RS27880 ad85f402e4c9fdbf896ed050b71ccd1f 72 Gene3D G3DSA:3.30.1660.10 4 68 2.9E-32 T 28-03-2018 IPR025543 Dodecin-like AL504_RS24800 8845cda5ac99eb14f6b02a455ec8f77e 173 Gene3D G3DSA:1.10.1740.10 9 85 2.6E-14 T 28-03-2018 AL504_RS24800 8845cda5ac99eb14f6b02a455ec8f77e 173 SUPERFAMILY SSF88946 12 101 3.26E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24800 8845cda5ac99eb14f6b02a455ec8f77e 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 162 3.8E-17 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24800 8845cda5ac99eb14f6b02a455ec8f77e 173 Gene3D G3DSA:1.10.10.10 109 173 8.2E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24800 8845cda5ac99eb14f6b02a455ec8f77e 173 Pfam PF08281 Sigma-70, region 4 112 164 6.3E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24800 8845cda5ac99eb14f6b02a455ec8f77e 173 Pfam PF04542 Sigma-70 region 2 15 81 1.4E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24800 8845cda5ac99eb14f6b02a455ec8f77e 173 SUPERFAMILY SSF88659 107 164 2.11E-11 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS01175 656858cfa60fb37f6cba2d6b3067a13e 209 Pfam PF13599 Pentapeptide repeats (9 copies) 145 189 1.2E-6 T 28-03-2018 IPR001646 Pentapeptide repeat AL504_RS01175 656858cfa60fb37f6cba2d6b3067a13e 209 SUPERFAMILY SSF141571 83 182 6.77E-15 T 28-03-2018 AL504_RS01175 656858cfa60fb37f6cba2d6b3067a13e 209 Gene3D G3DSA:2.160.10.20 55 115 2.4E-5 T 28-03-2018 AL504_RS01175 656858cfa60fb37f6cba2d6b3067a13e 209 Gene3D G3DSA:2.160.10.20 116 209 1.4E-13 T 28-03-2018 AL504_RS02765 cc2a3903cb18fba1038c7ab7b9434619 270 Gene3D G3DSA:3.40.50.1820 30 269 2.0E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS02765 cc2a3903cb18fba1038c7ab7b9434619 270 Pfam PF12697 Alpha/beta hydrolase family 36 264 4.9E-13 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS02765 cc2a3903cb18fba1038c7ab7b9434619 270 SUPERFAMILY SSF53474 31 267 7.01E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 530 556 1.4E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 267 1.2E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 SMART SM00382 29 227 1.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 SMART SM00382 336 528 1.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 SUPERFAMILY SSF52540 307 550 5.95E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 Gene3D G3DSA:3.40.50.300 305 565 9.6E-75 T 28-03-2018 AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 Gene3D G3DSA:3.40.50.300 1 281 5.3E-67 T 28-03-2018 AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 Pfam PF00005 ABC transporter 22 177 4.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 Pfam PF00005 ABC transporter 328 478 8.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 SUPERFAMILY SSF52540 4 248 6.48E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17365 8643b5d5f33f6028819326f9c038e804 569 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS31105 c0b79ffbdbae5ae0a16c5ad955601ce8 318 SUPERFAMILY SSF54427 200 310 3.88E-29 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS31105 c0b79ffbdbae5ae0a16c5ad955601ce8 318 Gene3D G3DSA:1.10.3210.10 2 195 1.8E-35 T 28-03-2018 AL504_RS31105 c0b79ffbdbae5ae0a16c5ad955601ce8 318 Gene3D G3DSA:3.10.450.50 197 307 1.0E-14 T 28-03-2018 AL504_RS31105 c0b79ffbdbae5ae0a16c5ad955601ce8 318 SUPERFAMILY SSF109604 7 167 8.52E-33 T 28-03-2018 AL504_RS31105 c0b79ffbdbae5ae0a16c5ad955601ce8 318 Pfam PF12680 SnoaL-like domain 204 303 3.8E-12 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS31105 c0b79ffbdbae5ae0a16c5ad955601ce8 318 Pfam PF13023 HD domain 16 169 4.1E-36 T 28-03-2018 IPR006674 HD domain AL504_RS18725 383c9f03ca60f07934d8b5de8a10ab48 256 Gene3D G3DSA:3.30.450.40 77 255 1.5E-31 T 28-03-2018 IPR029016 GAF domain-like AL504_RS18725 383c9f03ca60f07934d8b5de8a10ab48 256 SUPERFAMILY SSF46785 9 80 1.83E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18725 383c9f03ca60f07934d8b5de8a10ab48 256 Gene3D G3DSA:1.10.10.10 9 71 1.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18725 383c9f03ca60f07934d8b5de8a10ab48 256 Pfam PF01614 Bacterial transcriptional regulator 130 250 8.3E-9 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS18725 383c9f03ca60f07934d8b5de8a10ab48 256 SUPERFAMILY SSF55781 66 252 2.16E-34 T 28-03-2018 IPR029016 GAF domain-like AL504_RS18725 383c9f03ca60f07934d8b5de8a10ab48 256 Pfam PF09339 IclR helix-turn-helix domain 16 61 7.4E-8 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS18725 383c9f03ca60f07934d8b5de8a10ab48 256 SMART SM00346 9 98 1.4E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS30875 e4796871f92fa13d507e517b91c608c3 313 Gene3D G3DSA:1.10.10.10 10 284 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30875 e4796871f92fa13d507e517b91c608c3 313 Pfam PF04492 Bacteriophage replication protein O 14 110 4.0E-23 T 28-03-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 AL504_RS30875 e4796871f92fa13d507e517b91c608c3 313 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 14 110 2.0E-19 T 28-03-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 AL504_RS24385 632098f634cf08c00f4f373a380ae86a 283 Gene3D G3DSA:3.40.50.1820 2 282 7.2E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24385 632098f634cf08c00f4f373a380ae86a 283 Pfam PF00561 alpha/beta hydrolase fold 52 151 1.1E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS24385 632098f634cf08c00f4f373a380ae86a 283 SUPERFAMILY SSF53474 23 280 2.51E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 6.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 6.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 6.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 Gene3D G3DSA:3.40.190.10 195 284 1.7E-16 T 28-03-2018 AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 Gene3D G3DSA:3.40.190.10 106 194 1.3E-15 T 28-03-2018 AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 80 1.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 Pfam PF03466 LysR substrate binding domain 105 313 9.5E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 SUPERFAMILY SSF53850 105 316 1.22E-34 T 28-03-2018 AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 Gene3D G3DSA:1.10.10.10 7 105 2.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03790 1bdd2d10b4c95cf8c0af61aa31db6d8d 323 SUPERFAMILY SSF46785 19 104 7.21E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21890 085f5f630222bca478b028ed1a547505 296 Gene3D G3DSA:3.40.190.10 183 267 1.5E-23 T 28-03-2018 AL504_RS21890 085f5f630222bca478b028ed1a547505 296 Gene3D G3DSA:3.40.190.10 91 182 7.4E-24 T 28-03-2018 AL504_RS21890 085f5f630222bca478b028ed1a547505 296 SUPERFAMILY SSF46785 4 114 7.92E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21890 085f5f630222bca478b028ed1a547505 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21890 085f5f630222bca478b028ed1a547505 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21890 085f5f630222bca478b028ed1a547505 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21890 085f5f630222bca478b028ed1a547505 296 Gene3D G3DSA:1.10.10.10 1 89 7.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21890 085f5f630222bca478b028ed1a547505 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.2E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21890 085f5f630222bca478b028ed1a547505 296 Pfam PF03466 LysR substrate binding domain 91 293 3.8E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21890 085f5f630222bca478b028ed1a547505 296 SUPERFAMILY SSF53850 90 294 2.47E-43 T 28-03-2018 AL504_RS18065 b944d74313676a23cb15846a92ed104a 152 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 7 151 3.9E-35 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AL504_RS18065 b944d74313676a23cb15846a92ed104a 152 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 7 149 7.4E-41 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AL504_RS18065 b944d74313676a23cb15846a92ed104a 152 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 100 108 3.1E-8 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AL504_RS18065 b944d74313676a23cb15846a92ed104a 152 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 109 118 3.1E-8 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AL504_RS18065 b944d74313676a23cb15846a92ed104a 152 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 10 24 3.1E-8 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AL504_RS18065 b944d74313676a23cb15846a92ed104a 152 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 7 152 23.86 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AL504_RS18065 b944d74313676a23cb15846a92ed104a 152 SUPERFAMILY SSF81330 17 145 2.48E-31 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AL504_RS25130 4aab1d4ee00d68ab3989b06a125409e7 230 Pfam PF13280 WYL domain 138 208 3.8E-12 T 28-03-2018 IPR026881 WYL domain AL504_RS25130 4aab1d4ee00d68ab3989b06a125409e7 230 SUPERFAMILY SSF46785 1 62 7.55E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25130 4aab1d4ee00d68ab3989b06a125409e7 230 Pfam PF08279 HTH domain 6 59 1.2E-15 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AL504_RS25130 4aab1d4ee00d68ab3989b06a125409e7 230 Gene3D G3DSA:1.10.10.10 1 64 9.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 SUPERFAMILY SSF52540 4 254 9.82E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 Pfam PF00005 ABC transporter 24 181 8.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 Pfam PF00005 ABC transporter 298 448 3.5E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 SMART SM00382 31 233 4.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 SMART SM00382 307 498 5.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 269 4.0E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 500 532 1.7E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 SUPERFAMILY SSF52540 273 520 3.24E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 Gene3D G3DSA:3.40.50.300 271 549 1.3E-75 T 28-03-2018 AL504_RS12730 f99a136e418093929ff6a75893b0245f 551 Gene3D G3DSA:3.40.50.300 1 270 2.9E-71 T 28-03-2018 AL504_RS15760 62bec08e6bc9b7d93ca24db556b630bc 78 Gene3D G3DSA:1.10.1200.10 1 78 7.4E-13 T 28-03-2018 AL504_RS15760 62bec08e6bc9b7d93ca24db556b630bc 78 SUPERFAMILY SSF47336 6 77 1.57E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS15760 62bec08e6bc9b7d93ca24db556b630bc 78 Pfam PF00550 Phosphopantetheine attachment site 22 74 1.8E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS11600 60eb48d55f45d5c9e7d7b03bb1cae46c 545 Gene3D G3DSA:3.40.50.1820 173 514 1.4E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS11600 60eb48d55f45d5c9e7d7b03bb1cae46c 545 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 48 214 1.7E-63 T 28-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AL504_RS11600 60eb48d55f45d5c9e7d7b03bb1cae46c 545 SUPERFAMILY SSF53474 172 474 1.35E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS11600 60eb48d55f45d5c9e7d7b03bb1cae46c 545 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 17 542 6.4E-197 T 28-03-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 AL504_RS26725 b3b2c8796a1f9c4066c9e20faca9daf4 505 SUPERFAMILY SSF100950 227 495 2.6E-79 T 28-03-2018 AL504_RS26725 b3b2c8796a1f9c4066c9e20faca9daf4 505 Gene3D G3DSA:3.40.1080.10 13 240 1.2E-38 T 28-03-2018 AL504_RS26725 b3b2c8796a1f9c4066c9e20faca9daf4 505 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 494 1.1E-227 T 28-03-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 AL504_RS26725 b3b2c8796a1f9c4066c9e20faca9daf4 505 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 215 1.3E-29 T 28-03-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 AL504_RS26725 b3b2c8796a1f9c4066c9e20faca9daf4 505 Gene3D G3DSA:3.40.1080.10 241 498 4.8E-59 T 28-03-2018 AL504_RS26725 b3b2c8796a1f9c4066c9e20faca9daf4 505 SUPERFAMILY SSF100950 4 222 8.37E-72 T 28-03-2018 AL504_RS26725 b3b2c8796a1f9c4066c9e20faca9daf4 505 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 320 463 2.7E-42 T 28-03-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AL504_RS22845 6cb058f9a710f7e2bf9f302d22c36352 506 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 18 184 6.3E-42 T 28-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AL504_RS22845 6cb058f9a710f7e2bf9f302d22c36352 506 Gene3D G3DSA:3.40.50.1820 143 440 7.2E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS22845 6cb058f9a710f7e2bf9f302d22c36352 506 SUPERFAMILY SSF53474 143 428 9.9E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16980 03b6f8caa5351dd2076364e5efc718ac 221 Gene3D G3DSA:3.40.1080.10 2 221 5.6E-75 T 28-03-2018 AL504_RS16980 03b6f8caa5351dd2076364e5efc718ac 221 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 220 2.3E-99 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AL504_RS16980 03b6f8caa5351dd2076364e5efc718ac 221 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS16980 03b6f8caa5351dd2076364e5efc718ac 221 Pfam PF01144 Coenzyme A transferase 8 218 1.7E-60 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS16980 03b6f8caa5351dd2076364e5efc718ac 221 SMART SM00882 6 219 1.5E-66 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS16980 03b6f8caa5351dd2076364e5efc718ac 221 SUPERFAMILY SSF100950 2 220 2.65E-72 T 28-03-2018 AL504_RS30080 047058c4f83d25772983691159b1a869 274 SMART SM00342 189 271 1.2E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS30080 047058c4f83d25772983691159b1a869 274 Gene3D G3DSA:1.10.10.60 226 272 3.8E-13 T 28-03-2018 AL504_RS30080 047058c4f83d25772983691159b1a869 274 SUPERFAMILY SSF46689 172 223 3.4E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS30080 047058c4f83d25772983691159b1a869 274 Gene3D G3DSA:1.10.10.60 168 225 1.8E-10 T 28-03-2018 AL504_RS30080 047058c4f83d25772983691159b1a869 274 Pfam PF12833 Helix-turn-helix domain 195 270 5.7E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS30080 047058c4f83d25772983691159b1a869 274 SUPERFAMILY SSF46689 226 270 1.48E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS30080 047058c4f83d25772983691159b1a869 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 267 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS23765 990a1e4d9af204b423cb0f7dd80ee798 421 Pfam PF01593 Flavin containing amine oxidoreductase 10 277 1.0E-23 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL504_RS23765 990a1e4d9af204b423cb0f7dd80ee798 421 SUPERFAMILY SSF51905 378 409 6.15E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23765 990a1e4d9af204b423cb0f7dd80ee798 421 SUPERFAMILY SSF51905 1 298 6.15E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23765 990a1e4d9af204b423cb0f7dd80ee798 421 Gene3D G3DSA:3.90.660.20 32 341 3.5E-41 T 28-03-2018 AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 Pfam PF03466 LysR substrate binding domain 87 292 1.9E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 Gene3D G3DSA:3.40.190.10 88 174 3.5E-18 T 28-03-2018 AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 SUPERFAMILY SSF53850 87 294 6.83E-38 T 28-03-2018 AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 Gene3D G3DSA:1.10.10.10 1 83 1.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.8E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 SUPERFAMILY SSF46785 1 86 1.63E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01100 2b372f5eeeb5c5587562b6cc1877ad1e 296 Gene3D G3DSA:3.40.190.10 175 267 3.4E-25 T 28-03-2018 AL504_RS31405 2f94145a5efab804fea324891347e5a2 436 Gene3D G3DSA:1.20.1250.20 238 432 6.3E-25 T 28-03-2018 AL504_RS31405 2f94145a5efab804fea324891347e5a2 436 Pfam PF07690 Major Facilitator Superfamily 34 395 1.0E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS31405 2f94145a5efab804fea324891347e5a2 436 Gene3D G3DSA:1.20.1250.20 17 228 1.1E-36 T 28-03-2018 AL504_RS31405 2f94145a5efab804fea324891347e5a2 436 SUPERFAMILY SSF103473 14 429 7.19E-88 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS04960 4f4299ecfeec2dc2cfdd92ca7a29f573 276 SUPERFAMILY SSF55811 97 251 8.65E-42 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS04960 4f4299ecfeec2dc2cfdd92ca7a29f573 276 ProSitePatterns PS00893 Nudix box signature. 178 199 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL504_RS04960 4f4299ecfeec2dc2cfdd92ca7a29f573 276 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 112 139 1.5E-9 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL504_RS04960 4f4299ecfeec2dc2cfdd92ca7a29f573 276 Pfam PF00293 NUDIX domain 149 250 4.3E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS04960 4f4299ecfeec2dc2cfdd92ca7a29f573 276 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 5 110 2.3E-6 T 28-03-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL504_RS04960 4f4299ecfeec2dc2cfdd92ca7a29f573 276 Gene3D G3DSA:3.90.79.10 145 271 1.1E-31 T 28-03-2018 AL504_RS03520 fa0f6d14d25ac72b1ad6b16b34167b16 291 SUPERFAMILY SSF161098 29 278 1.09E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03520 fa0f6d14d25ac72b1ad6b16b34167b16 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 285 3.2E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03520 fa0f6d14d25ac72b1ad6b16b34167b16 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 22 281 5.4E-93 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AL504_RS03520 fa0f6d14d25ac72b1ad6b16b34167b16 291 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 22 281 4.4E-103 T 28-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AL504_RS03520 fa0f6d14d25ac72b1ad6b16b34167b16 291 Gene3D G3DSA:1.10.3720.10 19 288 3.6E-48 T 28-03-2018 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 SMART SM00382 178 321 6.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 Pfam PF00158 Sigma-54 interaction domain 159 324 1.3E-65 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 244 259 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 Gene3D G3DSA:3.40.50.300 154 329 2.8E-24 T 28-03-2018 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 SUPERFAMILY SSF52172 17 203 7.26E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 SUPERFAMILY SSF52540 158 387 6.34E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 Gene3D G3DSA:1.10.8.60 330 410 6.4E-21 T 28-03-2018 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 Gene3D G3DSA:1.10.10.60 411 458 2.0E-15 T 28-03-2018 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 Gene3D G3DSA:3.40.50.2300 7 153 1.3E-29 T 28-03-2018 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 Pfam PF02954 Bacterial regulatory protein, Fis family 411 451 2.5E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 371 380 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 SUPERFAMILY SSF46689 369 454 3.94E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 SMART SM00448 17 128 3.7E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS09480 7b4e9bf9cb51c91a69abfa0b7a18f9b4 465 Pfam PF00072 Response regulator receiver domain 20 128 1.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS09415 6c56e1171944920c681217f460576e40 539 SUPERFAMILY SSF103473 271 442 4.71E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS09415 6c56e1171944920c681217f460576e40 539 SUPERFAMILY SSF103473 495 524 4.71E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS09415 6c56e1171944920c681217f460576e40 539 SUPERFAMILY SSF103473 25 216 4.71E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS09415 6c56e1171944920c681217f460576e40 539 Gene3D G3DSA:1.20.1250.20 30 219 8.8E-33 T 28-03-2018 AL504_RS09415 6c56e1171944920c681217f460576e40 539 Pfam PF07690 Major Facilitator Superfamily 40 432 5.2E-52 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS09415 6c56e1171944920c681217f460576e40 539 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 36 518 5.4E-159 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS09415 6c56e1171944920c681217f460576e40 539 Gene3D G3DSA:1.20.1250.20 275 525 5.0E-26 T 28-03-2018 AL504_RS26770 41db21e84d3e99509084f7d9eda90a69 254 Gene3D G3DSA:3.40.225.10 11 253 6.8E-52 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS26770 41db21e84d3e99509084f7d9eda90a69 254 SUPERFAMILY SSF53639 17 233 3.34E-50 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS26770 41db21e84d3e99509084f7d9eda90a69 254 SMART SM01007 22 203 4.4E-37 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS26770 41db21e84d3e99509084f7d9eda90a69 254 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 203 6.7E-35 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS07585 d7bec11f2ac674e2439d382b34a1244e 69 Pfam PF04995 Heme exporter protein D (CcmD) 16 54 9.1E-9 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL504_RS07585 d7bec11f2ac674e2439d382b34a1244e 69 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 54 5.2E-11 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL504_RS25505 061804dd503854cf0533973834ccf03e 471 Pfam PF07690 Major Facilitator Superfamily 11 184 2.4E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS25505 061804dd503854cf0533973834ccf03e 471 Pfam PF07690 Major Facilitator Superfamily 207 378 7.8E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS25505 061804dd503854cf0533973834ccf03e 471 Gene3D G3DSA:1.20.1250.20 193 385 2.4E-18 T 28-03-2018 AL504_RS25505 061804dd503854cf0533973834ccf03e 471 SUPERFAMILY SSF103473 9 368 3.92E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS25505 061804dd503854cf0533973834ccf03e 471 Gene3D G3DSA:1.20.1250.20 2 190 1.2E-15 T 28-03-2018 AL504_RS05455 c1e151225563d9c62f4fe02453318eaa 296 SUPERFAMILY SSF161098 50 275 8.63E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05455 c1e151225563d9c62f4fe02453318eaa 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 280 1.1E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05455 c1e151225563d9c62f4fe02453318eaa 296 Gene3D G3DSA:1.10.3720.10 7 286 2.1E-38 T 28-03-2018 AL504_RS30145 60129751ecce5209012841fd447366f5 242 Pfam PF13545 Crp-like helix-turn-helix domain 162 236 2.9E-20 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS30145 60129751ecce5209012841fd447366f5 242 ProSitePatterns PS00042 Crp-type HTH domain signature. 189 212 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL504_RS30145 60129751ecce5209012841fd447366f5 242 Gene3D G3DSA:2.60.120.10 26 158 3.2E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS30145 60129751ecce5209012841fd447366f5 242 SUPERFAMILY SSF51206 17 156 8.38E-24 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS30145 60129751ecce5209012841fd447366f5 242 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 203 218 5.9E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS30145 60129751ecce5209012841fd447366f5 242 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 203 5.9E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS30145 60129751ecce5209012841fd447366f5 242 SUPERFAMILY SSF46785 161 238 3.18E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30145 60129751ecce5209012841fd447366f5 242 SMART SM00419 181 229 2.3E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS30145 60129751ecce5209012841fd447366f5 242 SMART SM00100 24 145 2.6E-7 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS30145 60129751ecce5209012841fd447366f5 242 Pfam PF00027 Cyclic nucleotide-binding domain 44 126 4.5E-11 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS30145 60129751ecce5209012841fd447366f5 242 Gene3D G3DSA:1.10.10.10 159 241 1.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16110 8cc1c9fe9d7bb1f2e258e8e341305e22 221 SUPERFAMILY SSF46689 2 60 4.34E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16110 8cc1c9fe9d7bb1f2e258e8e341305e22 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 5.3E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS16110 8cc1c9fe9d7bb1f2e258e8e341305e22 221 Gene3D G3DSA:1.10.357.10 1 194 2.4E-23 T 28-03-2018 AL504_RS16110 8cc1c9fe9d7bb1f2e258e8e341305e22 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.7E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS16110 8cc1c9fe9d7bb1f2e258e8e341305e22 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.7E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS04090 4bc4db3a0395933c34e5299f9cc8f981 195 Gene3D G3DSA:3.30.1150.10 86 179 1.2E-4 T 28-03-2018 AL504_RS04090 4bc4db3a0395933c34e5299f9cc8f981 195 SUPERFAMILY SSF74653 80 173 6.41E-8 T 28-03-2018 AL504_RS04090 4bc4db3a0395933c34e5299f9cc8f981 195 SMART SM00965 26 77 6.0E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS15105 555403be2bab2e6f442b06bf8f5934f1 239 Gene3D G3DSA:3.40.50.300 7 237 6.3E-50 T 28-03-2018 AL504_RS15105 555403be2bab2e6f442b06bf8f5934f1 239 SMART SM00382 35 218 1.8E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15105 555403be2bab2e6f442b06bf8f5934f1 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS15105 555403be2bab2e6f442b06bf8f5934f1 239 SUPERFAMILY SSF52540 10 231 5.33E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15105 555403be2bab2e6f442b06bf8f5934f1 239 Pfam PF00005 ABC transporter 26 167 1.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS22325 983c7383311f865a67af7b783297abb1 236 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS22325 983c7383311f865a67af7b783297abb1 236 SMART SM00382 26 209 1.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS22325 983c7383311f865a67af7b783297abb1 236 SUPERFAMILY SSF52540 2 219 3.76E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS22325 983c7383311f865a67af7b783297abb1 236 Gene3D G3DSA:3.40.50.300 1 231 2.1E-57 T 28-03-2018 AL504_RS22325 983c7383311f865a67af7b783297abb1 236 Pfam PF00005 ABC transporter 17 161 3.4E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16555 b353d01d129d5a332940278275e30d4e 244 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 21 229 1.7E-56 T 28-03-2018 IPR010016 KipI family AL504_RS16555 b353d01d129d5a332940278275e30d4e 244 Gene3D G3DSA:3.30.1360.40 2 100 3.4E-19 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL504_RS16555 b353d01d129d5a332940278275e30d4e 244 SMART SM00796 15 220 1.8E-91 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL504_RS16555 b353d01d129d5a332940278275e30d4e 244 SUPERFAMILY SSF160467 16 111 4.18E-16 T 28-03-2018 AL504_RS16555 b353d01d129d5a332940278275e30d4e 244 SUPERFAMILY SSF50891 106 236 5.69E-47 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS16555 b353d01d129d5a332940278275e30d4e 244 Gene3D G3DSA:2.40.100.10 104 238 2.3E-49 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS16555 b353d01d129d5a332940278275e30d4e 244 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 15 219 2.9E-70 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL504_RS19710 8f39b4b97611f3c4589395c403dcb128 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.019 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL504_RS19710 8f39b4b97611f3c4589395c403dcb128 98 SUPERFAMILY SSF54189 2 92 5.76E-30 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19710 8f39b4b97611f3c4589395c403dcb128 98 Gene3D G3DSA:3.30.70.330 5 98 4.2E-29 T 28-03-2018 AL504_RS19710 8f39b4b97611f3c4589395c403dcb128 98 Pfam PF00276 Ribosomal protein L23 8 94 4.1E-30 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL504_RS25185 f91cfb98fdb7263d44ba18b08e008d16 332 Gene3D G3DSA:1.10.3470.10 4 332 5.7E-68 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS25185 f91cfb98fdb7263d44ba18b08e008d16 332 Pfam PF01032 FecCD transport family 18 327 1.1E-82 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS25185 f91cfb98fdb7263d44ba18b08e008d16 332 SUPERFAMILY SSF81345 4 327 1.44E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 12 308 2.9E-113 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 11 309 78.476 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 Gene3D G3DSA:3.40.50.1370 169 309 4.8E-46 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 SUPERFAMILY SSF53671 11 308 2.88E-102 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 139 150 2.0E-27 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 57 76 2.0E-27 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 273 296 2.0E-27 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 261 270 2.0E-27 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 306 3.8E-47 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 128 142 5.0E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 287 298 5.0E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 225 235 5.0E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 55 69 5.0E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 88 101 5.0E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 Gene3D G3DSA:3.40.50.1370 11 168 9.2E-64 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 12 151 1.4E-50 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL504_RS10055 f530465acca590b3dd5f752a02331e4e 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 57 64 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS24695 68d688f390d268ed3944dd8e8435e64b 297 SUPERFAMILY SSF53850 93 292 2.71E-19 T 28-03-2018 AL504_RS24695 68d688f390d268ed3944dd8e8435e64b 297 Gene3D G3DSA:3.40.190.10 193 263 1.6E-6 T 28-03-2018 AL504_RS24695 68d688f390d268ed3944dd8e8435e64b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24695 68d688f390d268ed3944dd8e8435e64b 297 Gene3D G3DSA:1.10.10.10 1 82 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24695 68d688f390d268ed3944dd8e8435e64b 297 SUPERFAMILY SSF46785 1 89 3.08E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24695 68d688f390d268ed3944dd8e8435e64b 297 Gene3D G3DSA:3.40.190.10 83 192 5.7E-6 T 28-03-2018 AL504_RS24695 68d688f390d268ed3944dd8e8435e64b 297 Pfam PF03466 LysR substrate binding domain 94 293 2.1E-16 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS12150 a892271b42322c69dd77fad38fe8ef6f 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.547 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL504_RS12150 a892271b42322c69dd77fad38fe8ef6f 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.7E-17 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS12150 a892271b42322c69dd77fad38fe8ef6f 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL504_RS12150 a892271b42322c69dd77fad38fe8ef6f 79 SUPERFAMILY SSF47336 2 76 1.44E-23 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS12150 a892271b42322c69dd77fad38fe8ef6f 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 1.7E-35 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL504_RS12150 a892271b42322c69dd77fad38fe8ef6f 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.004 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL504_RS12150 a892271b42322c69dd77fad38fe8ef6f 79 Gene3D G3DSA:1.10.1200.10 1 78 3.3E-28 T 28-03-2018 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 Pfam PF00034 Cytochrome c 39 134 4.3E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 PRINTS PR00605 Class IC cytochrome C signature 56 67 8.2E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 PRINTS PR00605 Class IC cytochrome C signature 207 229 8.2E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 166 228 1.3E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 Gene3D G3DSA:1.10.760.10 18 134 3.5E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 Gene3D G3DSA:1.10.760.10 136 231 5.1E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 PIRSF PIRSF000005 3 233 1.9E-60 T 28-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 SUPERFAMILY SSF46626 147 231 4.3E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS20070 8f01d910596272124984d2719a012a7a 233 SUPERFAMILY SSF46626 37 133 4.01E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS26560 910259a1bd155a53ac3dd2f987e975d3 323 Gene3D G3DSA:3.40.190.10 179 266 5.2E-18 T 28-03-2018 AL504_RS26560 910259a1bd155a53ac3dd2f987e975d3 323 Gene3D G3DSA:1.10.10.10 2 84 4.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26560 910259a1bd155a53ac3dd2f987e975d3 323 SUPERFAMILY SSF53850 89 297 3.26E-38 T 28-03-2018 AL504_RS26560 910259a1bd155a53ac3dd2f987e975d3 323 Gene3D G3DSA:3.40.190.10 88 178 1.6E-9 T 28-03-2018 AL504_RS26560 910259a1bd155a53ac3dd2f987e975d3 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26560 910259a1bd155a53ac3dd2f987e975d3 323 Pfam PF03466 LysR substrate binding domain 88 293 6.9E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26560 910259a1bd155a53ac3dd2f987e975d3 323 SUPERFAMILY SSF46785 3 86 7.26E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12360 24824ef6704acebca7cb32582e91dcb2 612 SMART SM00382 371 569 1.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12360 24824ef6704acebca7cb32582e91dcb2 612 Gene3D G3DSA:3.40.50.300 343 607 1.5E-58 T 28-03-2018 AL504_RS12360 24824ef6704acebca7cb32582e91dcb2 612 SUPERFAMILY SSF52540 345 590 2.61E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12360 24824ef6704acebca7cb32582e91dcb2 612 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 297 1.8E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS12360 24824ef6704acebca7cb32582e91dcb2 612 Pfam PF00005 ABC transporter 363 520 5.5E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12360 24824ef6704acebca7cb32582e91dcb2 612 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 570 591 1.2E-9 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS12360 24824ef6704acebca7cb32582e91dcb2 612 Gene3D G3DSA:1.10.3470.10 5 302 1.7E-39 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 SUPERFAMILY SSF90123 19 327 3.14E-41 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 Gene3D G3DSA:3.40.50.300 331 579 3.3E-61 T 28-03-2018 AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 Pfam PF00005 ABC transporter 357 509 1.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 Pfam PF00664 ABC transporter transmembrane region 35 290 2.0E-6 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 SMART SM00382 365 556 2.3E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 23 568 3.4E-222 T 28-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 Gene3D G3DSA:1.20.1560.10 12 325 1.3E-19 T 28-03-2018 AL504_RS22385 757ecc823be0f1d67940d2dc4112e2bd 645 SUPERFAMILY SSF52540 331 569 1.12E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14715 49067000294c9e1533b3debd2e6db707 327 SUPERFAMILY SSF51261 163 307 1.15E-57 T 28-03-2018 IPR011055 Duplicated hybrid motif AL504_RS14715 49067000294c9e1533b3debd2e6db707 327 Gene3D G3DSA:2.70.70.10 150 312 1.4E-46 T 28-03-2018 AL504_RS14715 49067000294c9e1533b3debd2e6db707 327 Pfam PF01551 Peptidase family M23 209 303 1.3E-34 T 28-03-2018 IPR016047 Peptidase M23 AL504_RS26895 dbba46087a21c78ef3f27435f22604a5 625 Pfam PF02653 Branched-chain amino acid transport system / permease component 348 605 4.5E-30 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS26895 dbba46087a21c78ef3f27435f22604a5 625 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 290 5.0E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS26895 dbba46087a21c78ef3f27435f22604a5 625 Gene3D G3DSA:1.10.3470.10 286 614 8.6E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS26895 dbba46087a21c78ef3f27435f22604a5 625 Gene3D G3DSA:1.10.3470.10 1 285 7.8E-44 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS16820 d6afa78a66e31db7d1247bf9f7d0dfd5 323 SUPERFAMILY SSF53187 16 321 3.64E-51 T 28-03-2018 AL504_RS16820 d6afa78a66e31db7d1247bf9f7d0dfd5 323 Gene3D G3DSA:3.40.630.10 36 261 1.5E-13 T 28-03-2018 AL504_RS16820 d6afa78a66e31db7d1247bf9f7d0dfd5 323 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 41 192 3.4E-11 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 SUPERFAMILY SSF63411 269 453 3.19E-24 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 Pfam PF05193 Peptidase M16 inactive domain 666 844 2.2E-25 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 Pfam PF05193 Peptidase M16 inactive domain 208 382 2.2E-27 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 SUPERFAMILY SSF63411 741 914 6.22E-30 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 Gene3D G3DSA:3.30.830.10 731 917 3.2E-32 T 28-03-2018 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 SUPERFAMILY SSF63411 479 716 1.62E-27 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 Pfam PF00675 Insulinase (Peptidase family M16) 53 199 1.6E-20 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 Gene3D G3DSA:3.30.830.10 29 250 1.1E-55 T 28-03-2018 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 SUPERFAMILY SSF63411 42 258 6.33E-52 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 Gene3D G3DSA:3.30.830.10 497 717 1.4E-27 T 28-03-2018 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 74 97 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL504_RS13420 32318e5d3b3c4b6034142cfde34811ae 917 Gene3D G3DSA:3.30.830.10 251 444 2.4E-24 T 28-03-2018 AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 SUPERFAMILY SSF46785 5 73 5.62E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 Gene3D G3DSA:1.10.10.10 73 146 0.0049 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 SMART SM00345 7 65 1.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 Gene3D G3DSA:1.20.120.530 148 297 2.0E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 Gene3D G3DSA:1.10.10.10 1 72 2.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 Pfam PF07729 FCD domain 160 283 5.7E-18 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 SMART SM00895 159 284 6.9E-11 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 SUPERFAMILY SSF48008 154 290 3.14E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS24815 b1745895cc9b0fd3f52ef3f23d60d911 298 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 64 7.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS00595 a1111346dc005bfa3768265c2376a048 322 PIRSF PIRSF017082 1 320 6.5E-72 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00595 a1111346dc005bfa3768265c2376a048 322 Gene3D G3DSA:3.40.190.10 124 321 7.4E-12 T 28-03-2018 AL504_RS00595 a1111346dc005bfa3768265c2376a048 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 317 6.1E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00595 a1111346dc005bfa3768265c2376a048 322 SUPERFAMILY SSF53850 109 283 5.73E-15 T 28-03-2018 AL504_RS20680 898202e1a9ee8e33e200bd3bd80ef62b 280 SUPERFAMILY SSF51730 3 279 1.08E-95 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS20680 898202e1a9ee8e33e200bd3bd80ef62b 280 Gene3D G3DSA:3.20.20.220 1 280 2.1E-96 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS20680 898202e1a9ee8e33e200bd3bd80ef62b 280 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 9 278 6.3E-99 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AL504_RS20680 898202e1a9ee8e33e200bd3bd80ef62b 280 Pfam PF02219 Methylenetetrahydrofolate reductase 4 278 6.0E-90 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL504_RS13230 fa60681dc9b1bde3f499903d76769c59 263 SUPERFAMILY SSF56317 2 259 4.97E-66 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS13230 fa60681dc9b1bde3f499903d76769c59 263 Pfam PF00795 Carbon-nitrogen hydrolase 4 246 7.4E-39 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS13230 fa60681dc9b1bde3f499903d76769c59 263 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 144 164 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AL504_RS13230 fa60681dc9b1bde3f499903d76769c59 263 Gene3D G3DSA:3.60.110.10 1 261 1.9E-62 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS13055 ad9435cedfd55c50335f959fa6176a3b 308 Pfam PF00682 HMGL-like 5 279 8.6E-47 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL504_RS13055 ad9435cedfd55c50335f959fa6176a3b 308 Gene3D G3DSA:3.20.20.70 1 296 5.5E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS13055 ad9435cedfd55c50335f959fa6176a3b 308 SUPERFAMILY SSF51569 1 282 5.86E-67 T 28-03-2018 AL504_RS23380 b06969c949c0e3ae013395e0d281a956 552 Pfam PF01928 CYTH domain 1 185 4.4E-18 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL504_RS23380 b06969c949c0e3ae013395e0d281a956 552 Pfam PF05235 CHAD domain 243 508 5.2E-42 T 28-03-2018 IPR007899 CHAD domain AL504_RS23380 b06969c949c0e3ae013395e0d281a956 552 SMART SM00880 242 544 2.5E-54 T 28-03-2018 IPR007899 CHAD domain AL504_RS23380 b06969c949c0e3ae013395e0d281a956 552 Gene3D G3DSA:2.40.320.10 1 200 1.7E-28 T 28-03-2018 AL504_RS23380 b06969c949c0e3ae013395e0d281a956 552 SUPERFAMILY SSF55154 1 191 8.34E-31 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AL504_RS23380 b06969c949c0e3ae013395e0d281a956 552 SMART SM01118 1 193 6.9E-26 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL504_RS00350 398cdf21a7219a9a05d087343680e5ba 109 Pfam PF02656 Domain of unknown function (DUF202) 6 65 4.6E-13 T 28-03-2018 IPR003807 Domain of unknown function DUF202 AL504_RS00350 398cdf21a7219a9a05d087343680e5ba 109 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 6 40 3.0E-5 T 28-03-2018 IPR020264 Uncharacterised protein family YidG AL504_RS25910 57878d8597a6f15835035383d75d98d7 264 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 263 5.2E-92 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AL504_RS25910 57878d8597a6f15835035383d75d98d7 264 Gene3D G3DSA:1.10.3720.10 16 264 1.4E-28 T 28-03-2018 AL504_RS25910 57878d8597a6f15835035383d75d98d7 264 SUPERFAMILY SSF161098 67 254 1.83E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS25910 57878d8597a6f15835035383d75d98d7 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 262 1.8E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 Pfam PF01207 Dihydrouridine synthase (Dus) 16 315 7.8E-100 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 5 321 1.1E-116 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 PIRSF PIRSF006621 2 329 3.8E-101 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 Gene3D G3DSA:3.20.20.70 8 254 1.6E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 3 326 49.632 T 28-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 Gene3D G3DSA:1.10.1200.80 256 332 7.1E-23 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AL504_RS13720 37dd4ce62837a0cc3c68bde7b79202ae 343 SUPERFAMILY SSF51395 12 322 9.52E-87 T 28-03-2018 AL504_RS21045 9a10e6ef1b15f50c6289a2de1c00bb50 262 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 21 261 3.6E-78 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS21045 9a10e6ef1b15f50c6289a2de1c00bb50 262 PIRSF PIRSF002854 2 262 5.1E-109 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS21045 9a10e6ef1b15f50c6289a2de1c00bb50 262 SUPERFAMILY SSF53850 26 262 7.21E-89 T 28-03-2018 AL504_RS21045 9a10e6ef1b15f50c6289a2de1c00bb50 262 Pfam PF03180 NLPA lipoprotein 27 262 5.4E-102 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL504_RS21045 9a10e6ef1b15f50c6289a2de1c00bb50 262 Gene3D G3DSA:3.40.190.10 23 120 4.4E-26 T 28-03-2018 AL504_RS21045 9a10e6ef1b15f50c6289a2de1c00bb50 262 Gene3D G3DSA:3.40.190.10 121 262 6.2E-58 T 28-03-2018 AL504_RS24830 a6eb70974ea249150abc93a3b83e74ad 212 SUPERFAMILY SSF48150 36 204 3.49E-42 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL504_RS24830 a6eb70974ea249150abc93a3b83e74ad 212 SMART SM00478 50 206 1.2E-17 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS24830 a6eb70974ea249150abc93a3b83e74ad 212 Gene3D G3DSA:1.10.1670.10 155 209 1.3E-17 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL504_RS24830 a6eb70974ea249150abc93a3b83e74ad 212 Gene3D G3DSA:1.10.340.30 38 153 1.0E-21 T 28-03-2018 AL504_RS24830 a6eb70974ea249150abc93a3b83e74ad 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 46 188 7.6E-13 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 SUPERFAMILY SSF50249 1 63 2.28E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Gene3D G3DSA:1.10.150.20 82 135 1.4E-15 T 28-03-2018 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 SMART SM00278 73 92 3.5 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 SMART SM00278 108 127 0.0015 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 189 30.101 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 SUPERFAMILY SSF47781 67 133 2.85E-19 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Pfam PF01330 RuvA N terminal domain 1 62 1.6E-20 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 188 1.8E-50 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.5E-17 T 28-03-2018 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Pfam PF07499 RuvA, C-terminal domain 146 188 1.2E-11 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 SUPERFAMILY SSF46929 145 189 5.89E-8 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Gene3D G3DSA:1.10.340.30 54 81 0.19 T 28-03-2018 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Gene3D G3DSA:1.10.8.10 137 190 4.5E-9 T 28-03-2018 AL504_RS13740 7523317a79c4ef29676fac001487a628 190 Gene3D G3DSA:2.40.50.140 1 53 9.7E-25 T 28-03-2018 AL504_RS16260 d54da7dbfafee3b539d57966c1257b98 338 SUPERFAMILY SSF53850 123 298 5.97E-12 T 28-03-2018 AL504_RS16260 d54da7dbfafee3b539d57966c1257b98 338 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 331 1.6E-89 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16260 d54da7dbfafee3b539d57966c1257b98 338 PIRSF PIRSF017082 1 337 7.3E-82 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16260 d54da7dbfafee3b539d57966c1257b98 338 Gene3D G3DSA:3.40.190.10 143 266 1.6E-12 T 28-03-2018 AL504_RS29475 92fd16148bd0b18c265ad6168a5ca936 393 Pfam PF00108 Thiolase, N-terminal domain 7 229 2.5E-26 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL504_RS29475 92fd16148bd0b18c265ad6168a5ca936 393 Gene3D G3DSA:3.40.47.10 234 390 7.4E-14 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29475 92fd16148bd0b18c265ad6168a5ca936 393 Pfam PF02803 Thiolase, C-terminal domain 264 361 7.1E-11 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS29475 92fd16148bd0b18c265ad6168a5ca936 393 SUPERFAMILY SSF53901 22 123 1.17E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29475 92fd16148bd0b18c265ad6168a5ca936 393 SUPERFAMILY SSF53901 192 362 1.17E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS29475 92fd16148bd0b18c265ad6168a5ca936 393 PIRSF PIRSF000429 3 389 4.2E-62 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS29475 92fd16148bd0b18c265ad6168a5ca936 393 Gene3D G3DSA:3.40.47.10 2 233 3.1E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 SUPERFAMILY SSF53244 313 460 1.01E-45 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 463 8.4E-164 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 Pfam PF08245 Mur ligase middle domain 110 294 2.3E-26 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 468 41.94 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 Pfam PF01225 Mur ligase family, catalytic domain 7 105 9.9E-25 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 SUPERFAMILY SSF53623 91 312 3.79E-69 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 Gene3D G3DSA:3.40.1190.10 94 314 1.4E-49 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 SUPERFAMILY SSF51984 6 92 1.83E-27 T 28-03-2018 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 405 1.1E-19 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 Gene3D G3DSA:3.90.190.20 315 467 9.3E-39 T 28-03-2018 AL504_RS14750 d108c4d09c9602cd535c5687f9a36f94 468 Gene3D G3DSA:3.40.50.720 1 93 6.6E-14 T 28-03-2018 AL504_RS15300 c1ed62f4c0183c9e8c92059e7092567d 202 Pfam PF08281 Sigma-70, region 4 138 189 1.2E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS15300 c1ed62f4c0183c9e8c92059e7092567d 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 193 1.1E-27 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS15300 c1ed62f4c0183c9e8c92059e7092567d 202 Gene3D G3DSA:1.10.1740.10 24 108 1.9E-18 T 28-03-2018 AL504_RS15300 c1ed62f4c0183c9e8c92059e7092567d 202 Gene3D G3DSA:1.10.10.10 115 199 2.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS15300 c1ed62f4c0183c9e8c92059e7092567d 202 SUPERFAMILY SSF88659 130 193 3.55E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS15300 c1ed62f4c0183c9e8c92059e7092567d 202 Pfam PF04542 Sigma-70 region 2 38 102 1.4E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS15300 c1ed62f4c0183c9e8c92059e7092567d 202 SUPERFAMILY SSF88946 30 117 8.24E-19 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS19740 18438ba5f5decb6339ef1ebf48bbd0da 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 28-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19740 18438ba5f5decb6339ef1ebf48bbd0da 63 SUPERFAMILY SSF46561 1 61 5.36E-20 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19740 18438ba5f5decb6339ef1ebf48bbd0da 63 Gene3D G3DSA:1.10.287.310 1 63 1.4E-21 T 28-03-2018 AL504_RS19740 18438ba5f5decb6339ef1ebf48bbd0da 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.1E-21 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19740 18438ba5f5decb6339ef1ebf48bbd0da 63 Pfam PF00831 Ribosomal L29 protein 4 60 4.5E-21 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19740 18438ba5f5decb6339ef1ebf48bbd0da 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.408 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 Pfam PF01782 RimM N-terminal domain 16 106 3.8E-23 T 28-03-2018 IPR002676 RimM protein GO:0006364 AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 14 205 23.266 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 Gene3D G3DSA:2.40.30.60 13 111 7.0E-24 T 28-03-2018 IPR002676 RimM protein GO:0006364 AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 SUPERFAMILY SSF50346 117 205 2.75E-11 T 28-03-2018 IPR011033 PRC-barrel-like AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 Pfam PF05239 PRC-barrel domain 114 197 4.1E-5 T 28-03-2018 IPR027275 PRC-barrel domain AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 15 204 4.6E-37 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 Gene3D G3DSA:2.30.30.240 113 200 1.2E-20 T 28-03-2018 AL504_RS09195 18eaa8acba4cb034269ac12b9d0ee559 205 SUPERFAMILY SSF50447 13 110 5.3E-17 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL504_RS12240 433e02c4f74253cd624b55b07fdc08c2 288 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 54 67 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12240 433e02c4f74253cd624b55b07fdc08c2 288 Gene3D G3DSA:3.20.20.70 7 284 3.2E-77 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS12240 433e02c4f74253cd624b55b07fdc08c2 288 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 21 254 5.8E-73 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12240 433e02c4f74253cd624b55b07fdc08c2 288 SUPERFAMILY SSF51366 8 254 1.51E-83 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS12240 433e02c4f74253cd624b55b07fdc08c2 288 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 19 277 33.6 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS12240 433e02c4f74253cd624b55b07fdc08c2 288 Pfam PF00290 Tryptophan synthase alpha chain 19 259 6.1E-85 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL504_RS24505 f3849245dba5ee00339d3e6ce1a478d6 349 PRINTS PR00069 Aldo-keto reductase signature 119 137 9.6E-9 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24505 f3849245dba5ee00339d3e6ce1a478d6 349 PRINTS PR00069 Aldo-keto reductase signature 167 184 9.6E-9 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS24505 f3849245dba5ee00339d3e6ce1a478d6 349 SUPERFAMILY SSF51430 1 347 1.96E-108 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS24505 f3849245dba5ee00339d3e6ce1a478d6 349 Gene3D G3DSA:3.20.20.100 1 349 1.1E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS24505 f3849245dba5ee00339d3e6ce1a478d6 349 Pfam PF00248 Aldo/keto reductase family 16 340 3.9E-72 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 Gene3D G3DSA:3.30.420.40 247 501 7.3E-52 T 28-03-2018 AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 SUPERFAMILY SSF53067 252 495 6.8E-52 T 28-03-2018 AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 SUPERFAMILY SSF53067 3 253 1.42E-37 T 28-03-2018 AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 250 4.8E-28 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 PIRSF PIRSF000538 1 501 1.1E-80 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 Gene3D G3DSA:3.30.420.40 1 246 3.5E-41 T 28-03-2018 AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 448 2.0E-33 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL504_RS22215 f66aeea1ab9bc15834ce5daaa8e7ed86 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL504_RS24485 26b62f610c72f5643e4e80f4fee0d806 119 Gene3D G3DSA:3.30.780.10 30 117 1.1E-14 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL504_RS24485 26b62f610c72f5643e4e80f4fee0d806 119 Pfam PF01253 Translation initiation factor SUI1 43 110 2.5E-15 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL504_RS24485 26b62f610c72f5643e4e80f4fee0d806 119 PIRSF PIRSF037511 1 119 1.3E-33 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL504_RS24485 26b62f610c72f5643e4e80f4fee0d806 119 SUPERFAMILY SSF55159 7 115 4.05E-27 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 Pfam PF00034 Cytochrome c 186 295 1.7E-4 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 Pfam PF00034 Cytochrome c 35 132 1.7E-4 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 322 406 6.1E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 SUPERFAMILY SSF46626 324 427 2.4E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 Gene3D G3DSA:1.10.760.10 316 436 3.4E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 Gene3D G3DSA:1.10.760.10 7 147 2.3E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 Gene3D G3DSA:1.10.760.10 163 315 1.5E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 SUPERFAMILY SSF46626 186 295 1.18E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 SUPERFAMILY SSF46626 24 154 2.21E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 PIRSF PIRSF000018 1 436 4.3E-163 T 28-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 PRINTS PR00605 Class IC cytochrome C signature 331 342 3.3E-6 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL504_RS01470 9359566219fa68b94634939f011e7b3b 437 PRINTS PR00605 Class IC cytochrome C signature 384 406 3.3E-6 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL504_RS23590 500ac4afde8b2fe5f057817197cc8a62 206 SUPERFAMILY SSF69118 4 177 1.38E-22 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS23590 500ac4afde8b2fe5f057817197cc8a62 206 Gene3D G3DSA:1.20.1290.10 15 178 1.3E-16 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS04435 e75b8c52ef97df6b2eef9e17d176d802 200 SUPERFAMILY SSF55729 8 181 4.97E-40 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS04435 e75b8c52ef97df6b2eef9e17d176d802 200 Pfam PF13302 Acetyltransferase (GNAT) domain 18 154 5.1E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS04435 e75b8c52ef97df6b2eef9e17d176d802 200 Gene3D G3DSA:3.40.630.30 2 198 3.1E-29 T 28-03-2018 AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 39 69 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 SUPERFAMILY SSF46689 21 92 1.3E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 7.5E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 7.5E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 Gene3D G3DSA:1.10.357.10 71 207 2.7E-22 T 28-03-2018 AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 SUPERFAMILY SSF48498 97 206 2.33E-20 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 2.3E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS16775 dcbc2b4457dbdfa0d1334cbe7744a746 207 Gene3D G3DSA:1.10.10.60 1 70 1.2E-20 T 28-03-2018 AL504_RS24345 a3cca6eeb9d4040fea4e350fe504ac20 254 SUPERFAMILY SSF53639 19 221 9.81E-60 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS24345 a3cca6eeb9d4040fea4e350fe504ac20 254 Gene3D G3DSA:3.40.225.10 9 254 2.2E-73 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS24345 a3cca6eeb9d4040fea4e350fe504ac20 254 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 25 203 4.0E-44 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS24345 a3cca6eeb9d4040fea4e350fe504ac20 254 SMART SM01007 24 203 1.9E-58 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS27945 eb3c2aa501a5b81520e51dba7d31e2bd 432 Pfam PF09375 Imelysin 36 404 9.4E-103 T 28-03-2018 IPR018976 Peptidase M75, Imelysin AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 Gene3D G3DSA:3.20.20.140 70 281 2.2E-51 T 28-03-2018 AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 Gene3D G3DSA:3.20.20.140 282 429 7.5E-45 T 28-03-2018 AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 Pfam PF01979 Amidohydrolase family 51 441 1.2E-21 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 Gene3D G3DSA:2.30.40.10 5 69 6.6E-16 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 SUPERFAMILY SSF51338 356 460 7.14E-38 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 SUPERFAMILY SSF51556 55 388 3.88E-94 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 8 460 1.9E-161 T 28-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 AL504_RS29565 96e554c99db9bb6adf60feba41630497 489 SUPERFAMILY SSF51338 5 63 4.57E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS07140 87681b658e850056873f420481955755 367 Gene3D G3DSA:3.30.9.10 53 306 7.9E-34 T 28-03-2018 AL504_RS07140 87681b658e850056873f420481955755 367 SUPERFAMILY SSF51905 1 223 1.21E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07140 87681b658e850056873f420481955755 367 SUPERFAMILY SSF51905 306 362 1.21E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07140 87681b658e850056873f420481955755 367 Pfam PF01266 FAD dependent oxidoreductase 1 333 5.7E-43 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS07140 87681b658e850056873f420481955755 367 SUPERFAMILY SSF54373 223 306 2.09E-13 T 28-03-2018 AL504_RS15670 4786153702e4137755e49e4b955c40c6 230 SUPERFAMILY SSF52499 19 220 6.02E-52 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS15670 4786153702e4137755e49e4b955c40c6 230 Gene3D G3DSA:3.40.50.850 18 230 5.4E-49 T 28-03-2018 AL504_RS15670 4786153702e4137755e49e4b955c40c6 230 Pfam PF00857 Isochorismatase family 29 214 2.5E-37 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS01575 62f177d24675371322c33a10a3c25c62 237 SMART SM00382 37 231 2.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS01575 62f177d24675371322c33a10a3c25c62 237 Pfam PF00005 ABC transporter 28 174 3.0E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS01575 62f177d24675371322c33a10a3c25c62 237 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS01575 62f177d24675371322c33a10a3c25c62 237 Gene3D G3DSA:3.40.50.300 10 229 2.6E-65 T 28-03-2018 AL504_RS01575 62f177d24675371322c33a10a3c25c62 237 SUPERFAMILY SSF52540 13 226 5.6E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14050 e895e6597c041525a6d60602bdc5bcdf 464 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 2 448 1.0E-81 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS14050 e895e6597c041525a6d60602bdc5bcdf 464 SUPERFAMILY SSF56954 2 452 1.57E-84 T 28-03-2018 AL504_RS14050 e895e6597c041525a6d60602bdc5bcdf 464 Gene3D G3DSA:1.20.1600.10 14 452 2.9E-83 T 28-03-2018 AL504_RS14050 e895e6597c041525a6d60602bdc5bcdf 464 Pfam PF02321 Outer membrane efflux protein 271 447 2.5E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS14050 e895e6597c041525a6d60602bdc5bcdf 464 Pfam PF02321 Outer membrane efflux protein 57 238 3.1E-17 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS29635 1922d4c542a23c5bd2de1af772e6856a 258 Pfam PF02146 Sir2 family 27 203 2.3E-30 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 AL504_RS29635 1922d4c542a23c5bd2de1af772e6856a 258 SUPERFAMILY SSF52467 11 254 2.25E-59 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS29635 1922d4c542a23c5bd2de1af772e6856a 258 Gene3D G3DSA:3.40.50.1220 7 256 1.1E-46 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 Gene3D G3DSA:1.10.10.60 161 223 2.0E-11 T 28-03-2018 AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 SMART SM00342 181 263 2.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 Pfam PF02311 AraC-like ligand binding domain 37 149 1.9E-8 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 SUPERFAMILY SSF46689 218 264 9.41E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 Gene3D G3DSA:2.60.120.10 2 115 3.6E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 Gene3D G3DSA:1.10.10.60 225 267 2.9E-9 T 28-03-2018 AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 SUPERFAMILY SSF51182 21 190 2.67E-24 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS08120 2addf3a66896109c2752160c7b0c267d 268 Pfam PF12833 Helix-turn-helix domain 187 264 2.8E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS29840 28cb889ff60533c328ff69a4ba2b40bc 431 Gene3D G3DSA:3.40.50.300 153 423 1.1E-102 T 28-03-2018 AL504_RS29840 28cb889ff60533c328ff69a4ba2b40bc 431 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 192 414 1.1E-106 T 28-03-2018 IPR022488 Polyphosphate kinase-2-related AL504_RS29840 28cb889ff60533c328ff69a4ba2b40bc 431 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 190 415 5.0E-119 T 28-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AL504_RS29840 28cb889ff60533c328ff69a4ba2b40bc 431 SUPERFAMILY SSF52540 221 402 3.06E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04005 baf8ab90abe243f83eeed05fd0180758 391 Gene3D G3DSA:3.40.190.10 158 250 2.6E-14 T 28-03-2018 AL504_RS04005 baf8ab90abe243f83eeed05fd0180758 391 SUPERFAMILY SSF53850 161 374 9.95E-33 T 28-03-2018 AL504_RS04005 baf8ab90abe243f83eeed05fd0180758 391 Gene3D G3DSA:1.10.10.10 70 157 9.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04005 baf8ab90abe243f83eeed05fd0180758 391 Gene3D G3DSA:3.40.190.10 251 344 1.8E-16 T 28-03-2018 AL504_RS04005 baf8ab90abe243f83eeed05fd0180758 391 SUPERFAMILY SSF46785 70 179 7.48E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04005 baf8ab90abe243f83eeed05fd0180758 391 Pfam PF03466 LysR substrate binding domain 161 368 2.3E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS04005 baf8ab90abe243f83eeed05fd0180758 391 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 72 130 1.1E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30590 c2df8fdf9392e1e6a19bc5fe8e457dc7 389 Pfam PF13458 Periplasmic binding protein 24 375 1.1E-46 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS30590 c2df8fdf9392e1e6a19bc5fe8e457dc7 389 Gene3D G3DSA:3.40.50.2300 9 150 1.3E-15 T 28-03-2018 AL504_RS30590 c2df8fdf9392e1e6a19bc5fe8e457dc7 389 SUPERFAMILY SSF53822 24 382 7.07E-65 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS30590 c2df8fdf9392e1e6a19bc5fe8e457dc7 389 Gene3D G3DSA:3.40.50.2300 151 313 1.8E-27 T 28-03-2018 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 Pfam PF00248 Aldo/keto reductase family 18 261 1.8E-50 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 Gene3D G3DSA:3.20.20.100 3 271 3.5E-98 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 PRINTS PR00069 Aldo-keto reductase signature 93 111 2.4E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 2.4E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 PRINTS PR00069 Aldo-keto reductase signature 159 188 2.4E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.4E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 PRINTS PR00069 Aldo-keto reductase signature 125 142 2.4E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 SUPERFAMILY SSF51430 6 266 6.81E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS08145 eeb22dc4660169cfa534128814679fcb 275 PIRSF PIRSF000097 1 269 7.8E-93 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS08745 c576799c5e43f0d823bfe15a379eaff4 381 SUPERFAMILY SSF47413 11 86 1.57E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS08745 c576799c5e43f0d823bfe15a379eaff4 381 Pfam PF01381 Helix-turn-helix 16 67 5.1E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS08745 c576799c5e43f0d823bfe15a379eaff4 381 Pfam PF06114 IrrE N-terminal-like domain 220 334 2.0E-5 T 28-03-2018 IPR010359 IrrE N-terminal-like domain AL504_RS08745 c576799c5e43f0d823bfe15a379eaff4 381 Gene3D G3DSA:1.10.260.40 1 84 1.3E-10 T 28-03-2018 AL504_RS08745 c576799c5e43f0d823bfe15a379eaff4 381 SMART SM00530 14 69 2.7E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 Gene3D G3DSA:1.20.1080.10 2 233 2.0E-69 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 PRINTS PR00783 Major intrinsic protein family signature 170 192 1.0E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 PRINTS PR00783 Major intrinsic protein family signature 6 25 1.0E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 PRINTS PR00783 Major intrinsic protein family signature 140 158 1.0E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 PRINTS PR00783 Major intrinsic protein family signature 209 229 1.0E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 PRINTS PR00783 Major intrinsic protein family signature 83 102 1.0E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 PRINTS PR00783 Major intrinsic protein family signature 46 70 1.0E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 TIGRFAM TIGR00861 MIP: MIP family channel proteins 10 226 2.9E-61 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 Hamap MF_01146 Aquaporin Z [aqpZ]. 5 233 35.056 T 28-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 Pfam PF00230 Major intrinsic protein 5 226 3.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 SUPERFAMILY SSF81338 6 230 2.88E-67 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL504_RS31095 1e27266522eb95b16eb79c18c3adfa97 236 ProSitePatterns PS00221 MIP family signature. 64 72 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL504_RS28775 98a043cd2dab46afde0685a3e0af1dcf 399 Gene3D G3DSA:3.40.50.2300 176 346 9.7E-31 T 28-03-2018 AL504_RS28775 98a043cd2dab46afde0685a3e0af1dcf 399 Pfam PF13458 Periplasmic binding protein 27 381 4.2E-60 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS28775 98a043cd2dab46afde0685a3e0af1dcf 399 SUPERFAMILY SSF53822 27 394 3.7E-75 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS28775 98a043cd2dab46afde0685a3e0af1dcf 399 Gene3D G3DSA:3.40.50.2300 22 175 1.3E-30 T 28-03-2018 AL504_RS02095 ce6cdf688d15af4abf6a60bbddc7a4e3 269 Gene3D G3DSA:3.30.460.10 10 139 8.6E-5 T 28-03-2018 AL504_RS02095 ce6cdf688d15af4abf6a60bbddc7a4e3 269 Pfam PF10127 Predicted nucleotidyltransferase 14 259 3.3E-86 T 28-03-2018 IPR018775 Nucleotidyltransferase, predicted AL504_RS23715 adf931e4b1d10c5aa6641b55d564d9a6 315 Pfam PF01032 FecCD transport family 27 310 8.3E-38 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS23715 adf931e4b1d10c5aa6641b55d564d9a6 315 Gene3D G3DSA:1.10.3470.10 9 315 2.4E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS23715 adf931e4b1d10c5aa6641b55d564d9a6 315 SUPERFAMILY SSF81345 4 310 4.05E-43 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS30490 f680403765470ac6c0042c1c17245b80 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 293 6.6E-45 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS30490 f680403765470ac6c0042c1c17245b80 309 Gene3D G3DSA:1.10.3470.10 1 298 3.0E-51 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS26645 ee52c84e07a908de07d9ab075eac971f 263 SUPERFAMILY SSF161098 3 249 1.15E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26645 ee52c84e07a908de07d9ab075eac971f 263 Gene3D G3DSA:1.10.3720.10 5 258 1.4E-35 T 28-03-2018 AL504_RS26645 ee52c84e07a908de07d9ab075eac971f 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 2.4E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS22175 09ab16f4ec5103cfc13b5b3fe5f3ac44 201 Pfam PF06805 Bacteriophage lambda tail assembly protein I 6 89 8.5E-10 T 28-03-2018 IPR010654 Bacteriophage lambda tail assembly I AL504_RS27150 8a32cb62db24091a99e45811f8f20a98 428 Gene3D G3DSA:1.20.1250.20 229 423 8.7E-20 T 28-03-2018 AL504_RS27150 8a32cb62db24091a99e45811f8f20a98 428 Pfam PF07690 Major Facilitator Superfamily 35 268 1.1E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS27150 8a32cb62db24091a99e45811f8f20a98 428 SUPERFAMILY SSF103473 12 412 1.09E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS27150 8a32cb62db24091a99e45811f8f20a98 428 Gene3D G3DSA:1.20.1250.20 9 211 6.6E-27 T 28-03-2018 AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 SUPERFAMILY SSF51126 461 486 5.96E-32 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 SUPERFAMILY SSF51126 293 413 5.96E-32 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 SUPERFAMILY SSF51126 165 259 5.96E-32 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 SMART SM00912 151 255 1.1E-23 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 4035 4145 1.9E-38 T 28-03-2018 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Gene3D G3DSA:2.160.20.10 1086 1504 7.2E-4 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Gene3D G3DSA:2.160.20.10 2480 2868 0.2 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Gene3D G3DSA:2.160.20.10 1532 1667 0.13 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Gene3D G3DSA:2.160.20.10 140 435 9.7E-34 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Gene3D G3DSA:2.160.20.10 1701 1967 4.6E-4 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Gene3D G3DSA:2.160.20.10 688 1004 1.3E-6 T 28-03-2018 IPR012334 Pectin lyase fold AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 Pfam PF05860 haemagglutination activity domain 155 255 6.3E-19 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS29330 f1ee4f9452f9f6ad1626dc22cbd7574a 4230 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 176 250 1.3E-18 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 SUPERFAMILY SSF103515 597 902 1.7E-44 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 Gene3D G3DSA:2.160.20.20 61 573 2.2E-38 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 Pfam PF12951 Passenger-associated-transport-repeat 389 419 1.6E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 Pfam PF03797 Autotransporter beta-domain 632 881 1.5E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 135 184 7.3E-11 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 246 293 1.0E-5 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 49 74 1.1E-5 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 186 233 2.2E-14 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 Gene3D G3DSA:2.40.128.130 589 902 1.6E-43 T 28-03-2018 AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 455 902 1.1E-102 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 SUPERFAMILY SSF51126 171 569 7.22E-41 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 SMART SM00869 629 891 3.6E-40 T 28-03-2018 IPR005546 Autotransporter beta-domain AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 Pfam PF03212 Pertactin 473 567 6.6E-6 T 28-03-2018 IPR004899 Pertactin, central region AL504_RS01040 6b9234aca48bd8f190ce3071c2c29479 902 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 388 420 4.0E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 SMART SM00347 42 142 3.0E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 Gene3D G3DSA:1.10.10.10 3 164 2.3E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 2.8E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 2.8E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 2.8E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 Pfam PF12802 MarR family 48 106 6.4E-13 T 28-03-2018 AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 ProSitePatterns PS01117 MarR-type HTH domain signature. 81 115 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS26250 b49076da7f62721456eaf0c6caaa4f94 178 SUPERFAMILY SSF46785 16 155 2.15E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17000 71cfc7de52bc8c3d2575da998ad61cdf 199 SUPERFAMILY SSF52172 6 189 1.74E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS17000 71cfc7de52bc8c3d2575da998ad61cdf 199 Pfam PF03861 ANTAR domain 137 189 1.8E-13 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL504_RS17000 71cfc7de52bc8c3d2575da998ad61cdf 199 SMART SM01012 134 189 3.7E-12 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL504_RS17000 71cfc7de52bc8c3d2575da998ad61cdf 199 Gene3D G3DSA:3.40.50.2300 3 127 2.1E-5 T 28-03-2018 AL504_RS17000 71cfc7de52bc8c3d2575da998ad61cdf 199 Gene3D G3DSA:1.10.10.10 138 191 7.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17000 71cfc7de52bc8c3d2575da998ad61cdf 199 PIRSF PIRSF036382 3 196 1.3E-38 T 28-03-2018 IPR008327 Signal transduction response regulator, antiterminator AL504_RS13245 6f6d878233b75dbee2fde1fc40a28776 313 SUPERFAMILY SSF161098 97 298 2.49E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13245 6f6d878233b75dbee2fde1fc40a28776 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 313 1.5E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13245 6f6d878233b75dbee2fde1fc40a28776 313 Gene3D G3DSA:1.10.3720.10 2 301 2.4E-47 T 28-03-2018 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 SUPERFAMILY SSF51905 353 410 1.63E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 SUPERFAMILY SSF51905 6 199 1.63E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 PRINTS PR00419 Adrenodoxin reductase family signature 7 29 2.0E-7 T 28-03-2018 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 PRINTS PR00419 Adrenodoxin reductase family signature 30 43 2.0E-7 T 28-03-2018 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 406 9.1E-81 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 Pfam PF03486 HI0933-like protein 7 407 6.4E-104 T 28-03-2018 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 Gene3D G3DSA:3.50.50.60 6 409 2.5E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 28 413 1.6E-158 T 28-03-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 AL504_RS10790 35f8409d0032a15a3865a509b085b877 425 SUPERFAMILY SSF160996 204 354 1.28E-10 T 28-03-2018 AL504_RS26505 7cb9309c5ebee289a0d61d26ac841036 451 Gene3D G3DSA:1.20.1250.20 234 436 2.3E-25 T 28-03-2018 AL504_RS26505 7cb9309c5ebee289a0d61d26ac841036 451 Gene3D G3DSA:1.20.1250.20 2 218 1.5E-34 T 28-03-2018 AL504_RS26505 7cb9309c5ebee289a0d61d26ac841036 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 91 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS26505 7cb9309c5ebee289a0d61d26ac841036 451 Pfam PF07690 Major Facilitator Superfamily 25 331 5.6E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS26505 7cb9309c5ebee289a0d61d26ac841036 451 SUPERFAMILY SSF103473 10 432 1.57E-74 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS26505 7cb9309c5ebee289a0d61d26ac841036 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS17905 b2513dbf814a409dc94638ada446745e 256 Pfam PF03746 LamB/YcsF family 6 244 6.6E-91 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL504_RS17905 b2513dbf814a409dc94638ada446745e 256 SUPERFAMILY SSF88713 5 252 3.48E-90 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS17905 b2513dbf814a409dc94638ada446745e 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 248 41.455 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL504_RS17905 b2513dbf814a409dc94638ada446745e 256 Gene3D G3DSA:3.20.20.370 5 252 1.0E-95 T 28-03-2018 AL504_RS16505 22c93db55f4f64879dbf151ef7d121cc 338 Gene3D G3DSA:2.40.128.130 178 338 3.1E-5 T 28-03-2018 AL504_RS16505 22c93db55f4f64879dbf151ef7d121cc 338 Pfam PF05275 Copper resistance protein B precursor (CopB) 133 338 7.5E-79 T 28-03-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AL504_RS24585 0bd0f0e8aae2de1aa9dd1ff43d4509cc 437 Gene3D G3DSA:1.10.8.10 268 355 3.0E-14 T 28-03-2018 AL504_RS24585 0bd0f0e8aae2de1aa9dd1ff43d4509cc 437 Gene3D G3DSA:3.90.1530.10 66 256 1.1E-42 T 28-03-2018 AL504_RS24585 0bd0f0e8aae2de1aa9dd1ff43d4509cc 437 SUPERFAMILY SSF110849 68 100 2.41E-47 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS24585 0bd0f0e8aae2de1aa9dd1ff43d4509cc 437 SUPERFAMILY SSF110849 171 307 2.41E-47 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS24585 0bd0f0e8aae2de1aa9dd1ff43d4509cc 437 Pfam PF08857 Putative ParB-like nuclease 72 299 3.8E-51 T 28-03-2018 IPR014956 Putative ParB-like nuclease AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 13 548 1.1E-281 T 28-03-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 SUPERFAMILY SSF51011 475 547 6.69E-19 T 28-03-2018 AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 Gene3D G3DSA:3.90.1200.10 832 1098 2.4E-16 T 28-03-2018 AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 SUPERFAMILY SSF56112 743 1065 1.7E-16 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 Gene3D G3DSA:2.60.40.1180 468 558 1.3E-27 T 28-03-2018 AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 Pfam PF16657 Maltogenic Amylase, C-terminal domain 468 545 1.9E-30 T 28-03-2018 IPR032091 Maltogenic Amylase, C-terminal AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 SUPERFAMILY SSF51445 12 331 4.29E-128 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 SUPERFAMILY SSF51445 358 465 4.29E-128 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 SMART SM00642 21 420 1.2E-103 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 Gene3D G3DSA:3.20.20.80 18 467 6.7E-122 T 28-03-2018 AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 Pfam PF00128 Alpha amylase, catalytic domain 36 389 1.5E-71 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29060 f2ac2c561c527ede0bb2d15aca27c319 1113 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 564 1094 8.8E-162 T 28-03-2018 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain AL504_RS29960 c7813061732c9294f6067e20faefb9c2 145 SUPERFAMILY SSF55729 1 143 3.72E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS29960 c7813061732c9294f6067e20faefb9c2 145 Pfam PF13673 Acetyltransferase (GNAT) domain 37 130 3.4E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS29960 c7813061732c9294f6067e20faefb9c2 145 Gene3D G3DSA:3.40.630.30 1 145 4.4E-24 T 28-03-2018 AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 SMART SM00267 199 372 6.6E-11 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 Pfam PF16448 LapD/MoxY periplasmic domain 3 122 8.1E-8 T 28-03-2018 IPR032244 LapD/MoxY, periplasmic domain AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 365 1.4E-10 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 Gene3D G3DSA:3.30.70.270 203 375 8.9E-26 T 28-03-2018 AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 SUPERFAMILY SSF55073 216 370 1.33E-19 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 SUPERFAMILY SSF141868 388 615 4.32E-29 T 28-03-2018 IPR001633 EAL domain AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 Pfam PF00563 EAL domain 388 612 4.7E-30 T 28-03-2018 IPR001633 EAL domain AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 364 4.9E-17 T 28-03-2018 IPR000160 GGDEF domain AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 SMART SM00052 382 613 1.4E-9 T 28-03-2018 IPR001633 EAL domain AL504_RS08630 8e54ee67144b2d66147e21c2ee9b1e1d 631 Gene3D G3DSA:3.20.20.450 376 624 3.1E-33 T 28-03-2018 IPR001633 EAL domain AL504_RS28480 9716d3ede083cd54c318910dc0a59e07 753 Gene3D G3DSA:3.40.50.300 526 737 3.0E-29 T 28-03-2018 AL504_RS28480 9716d3ede083cd54c318910dc0a59e07 753 Pfam PF02706 Chain length determinant protein 25 110 1.6E-11 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL504_RS28480 9716d3ede083cd54c318910dc0a59e07 753 SUPERFAMILY SSF52540 550 728 2.57E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28480 9716d3ede083cd54c318910dc0a59e07 753 TIGRFAM TIGR01005 eps_transp_fam: exopolysaccharide transport protein family 21 745 7.3E-146 T 28-03-2018 IPR005700 Exopolysaccharide transport protein GO:0006859|GO:0015542 AL504_RS28480 9716d3ede083cd54c318910dc0a59e07 753 Pfam PF13614 AAA domain 559 675 5.4E-8 T 28-03-2018 IPR025669 AAA domain AL504_RS28480 9716d3ede083cd54c318910dc0a59e07 753 Gene3D G3DSA:3.30.1890.10 47 447 2.2E-62 T 28-03-2018 AL504_RS28480 9716d3ede083cd54c318910dc0a59e07 753 Pfam PF13807 G-rich domain on putative tyrosine kinase 391 472 1.2E-30 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain AL504_RS28880 d1038f50c86b89079e0778d7c7ae5bff 378 SUPERFAMILY SSF52540 238 372 2.22E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28880 d1038f50c86b89079e0778d7c7ae5bff 378 Pfam PF13671 AAA domain 239 362 4.0E-12 T 28-03-2018 AL504_RS28880 d1038f50c86b89079e0778d7c7ae5bff 378 Pfam PF01966 HD domain 48 140 1.7E-5 T 28-03-2018 IPR006674 HD domain AL504_RS28880 d1038f50c86b89079e0778d7c7ae5bff 378 Gene3D G3DSA:3.40.50.300 237 371 4.4E-13 T 28-03-2018 AL504_RS28880 d1038f50c86b89079e0778d7c7ae5bff 378 Gene3D G3DSA:1.10.472.50 27 135 6.9E-12 T 28-03-2018 AL504_RS28880 d1038f50c86b89079e0778d7c7ae5bff 378 SUPERFAMILY SSF109604 41 176 4.71E-16 T 28-03-2018 AL504_RS01665 fd073205e807b70435f948652253ae15 511 SUPERFAMILY SSF103473 477 500 4.58E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01665 fd073205e807b70435f948652253ae15 511 SUPERFAMILY SSF103473 255 425 4.58E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01665 fd073205e807b70435f948652253ae15 511 SUPERFAMILY SSF103473 13 202 4.58E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01665 fd073205e807b70435f948652253ae15 511 Pfam PF07690 Major Facilitator Superfamily 26 415 1.0E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01665 fd073205e807b70435f948652253ae15 511 Gene3D G3DSA:1.20.1250.20 11 205 1.3E-27 T 28-03-2018 AL504_RS01665 fd073205e807b70435f948652253ae15 511 Gene3D G3DSA:1.20.1250.20 266 502 1.5E-21 T 28-03-2018 AL504_RS01665 fd073205e807b70435f948652253ae15 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 406 425 4.8E-6 T 28-03-2018 AL504_RS01665 fd073205e807b70435f948652253ae15 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 4.8E-6 T 28-03-2018 AL504_RS01665 fd073205e807b70435f948652253ae15 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 309 333 4.8E-6 T 28-03-2018 AL504_RS01665 fd073205e807b70435f948652253ae15 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 83 105 4.8E-6 T 28-03-2018 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Gene3D G3DSA:3.40.50.300 2 232 8.1E-36 T 28-03-2018 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1167 22.242 T 28-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 SUPERFAMILY SSF52540 2 210 8.69E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 SUPERFAMILY SSF52540 967 1167 8.69E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Gene3D G3DSA:1.20.120.330 382 502 5.2E-4 T 28-03-2018 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Gene3D G3DSA:3.40.50.300 786 1170 1.7E-22 T 28-03-2018 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 623 1.3E-6 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1165 0.0 T 28-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 SMART SM00968 518 625 3.1E-10 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 PIRSF PIRSF005719 1 1173 2.5E-248 T 28-03-2018 IPR024704 Structural maintenance of chromosomes protein AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 SUPERFAMILY SSF75553 519 673 4.05E-10 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1158 7.6E-64 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Gene3D G3DSA:1.10.287.620 235 381 7.1E-10 T 28-03-2018 AL504_RS12420 ec512d715d29b6dbddca5de477bc939f 1177 Gene3D G3DSA:1.20.120.330 653 783 3.4E-6 T 28-03-2018 AL504_RS15445 e1bf71d3604f53295da6a80579e98613 448 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 284 438 2.1E-8 T 28-03-2018 IPR032034 Yop protein translocation protein D, periplasmic domain AL504_RS15445 e1bf71d3604f53295da6a80579e98613 448 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 6 447 6.9E-59 T 28-03-2018 IPR012843 Type III secretion system YscD/HrpQ AL504_RS13030 7c9c18bf372ae8431695c7d31a8fddc7 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 10 240 6.0E-60 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS13030 7c9c18bf372ae8431695c7d31a8fddc7 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 168 178 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS13030 7c9c18bf372ae8431695c7d31a8fddc7 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 7 248 38.06 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS13030 7c9c18bf372ae8431695c7d31a8fddc7 248 Pfam PF00121 Triosephosphate isomerase 10 245 3.1E-85 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS13030 7c9c18bf372ae8431695c7d31a8fddc7 248 Gene3D G3DSA:3.20.20.70 5 248 8.1E-98 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS13030 7c9c18bf372ae8431695c7d31a8fddc7 248 SUPERFAMILY SSF51351 5 246 1.7E-86 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS04545 4e9c1736b02cc5b747f7e3ba7f2db194 390 Gene3D G3DSA:2.120.10.30 27 288 1.4E-56 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS04545 4e9c1736b02cc5b747f7e3ba7f2db194 390 Gene3D G3DSA:2.120.10.30 289 378 3.6E-17 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS04545 4e9c1736b02cc5b747f7e3ba7f2db194 390 SUPERFAMILY SSF50952 39 386 2.75E-50 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AL504_RS04545 4e9c1736b02cc5b747f7e3ba7f2db194 390 Pfam PF07995 Glucose / Sorbosone dehydrogenase 52 382 2.8E-142 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 Gene3D G3DSA:3.40.50.10490 99 239 1.5E-31 T 28-03-2018 AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 Gene3D G3DSA:3.40.50.10490 359 439 1.4E-8 T 28-03-2018 AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 Pfam PF00342 Phosphoglucose isomerase 114 327 1.9E-14 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 SUPERFAMILY SSF53697 82 434 8.65E-65 T 28-03-2018 AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 PRINTS PR00662 Glucose-6-phosphate isomerase signature 117 136 7.6E-9 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 PRINTS PR00662 Glucose-6-phosphate isomerase signature 229 247 7.6E-9 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 PRINTS PR00662 Glucose-6-phosphate isomerase signature 305 326 7.6E-9 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS29115 bf2db482992f4e81aae5acafb1e0fbb8 628 Gene3D G3DSA:3.40.50.10490 240 346 1.3E-18 T 28-03-2018 AL504_RS21455 8af858784e18f33b80d5beb068b6d805 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.1E-36 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21455 8af858784e18f33b80d5beb068b6d805 103 SUPERFAMILY SSF141091 1 101 1.7E-37 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21455 8af858784e18f33b80d5beb068b6d805 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.045 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21455 8af858784e18f33b80d5beb068b6d805 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.9E-39 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS21455 8af858784e18f33b80d5beb068b6d805 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 28-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS07070 eec4f7f495b2b18d72e6b9400eea8cf0 232 Pfam PF01914 MarC family integral membrane protein 14 224 1.2E-51 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL504_RS07070 eec4f7f495b2b18d72e6b9400eea8cf0 232 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 21 221 3.2E-32 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL504_RS24625 39cb71d624f23c330adbb42bee294a71 213 SUPERFAMILY SSF81452 18 210 6.15E-59 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24625 39cb71d624f23c330adbb42bee294a71 213 Pfam PF00510 Cytochrome c oxidase subunit III 27 210 1.5E-14 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24625 39cb71d624f23c330adbb42bee294a71 213 Gene3D G3DSA:1.20.120.80 27 212 1.6E-50 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24625 39cb71d624f23c330adbb42bee294a71 213 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 33 212 5.0E-83 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AL504_RS15165 527df2f95b1dd5c8b6f4d8f8f881c47a 402 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 20.99 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL504_RS15165 527df2f95b1dd5c8b6f4d8f8f881c47a 402 Pfam PF03616 Sodium/glutamate symporter 3 366 4.0E-110 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL504_RS15165 527df2f95b1dd5c8b6f4d8f8f881c47a 402 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 4 397 6.5E-117 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL504_RS15165 527df2f95b1dd5c8b6f4d8f8f881c47a 402 Gene3D G3DSA:1.20.91.10 244 327 0.0056 T 28-03-2018 AL504_RS18325 4fd777619e54d154a621e9b4ac7bcd8e 676 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 111 562 4.0E-101 T 28-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AL504_RS18325 4fd777619e54d154a621e9b4ac7bcd8e 676 SUPERFAMILY SSF52540 107 558 1.86E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18325 4fd777619e54d154a621e9b4ac7bcd8e 676 Gene3D G3DSA:3.40.50.300 97 561 2.9E-49 T 28-03-2018 AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 76 9.0E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 Gene3D G3DSA:1.10.10.10 3 78 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 Pfam PF07729 FCD domain 90 208 4.0E-20 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 SUPERFAMILY SSF46785 9 80 1.18E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 SUPERFAMILY SSF48008 85 216 3.4E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 SMART SM00345 18 76 1.1E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 SMART SM00895 86 210 1.3E-13 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS02815 8126a5cd4b5c933965809ecc87ae11aa 229 Gene3D G3DSA:1.20.120.530 79 229 1.8E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS27255 af3f7f27e2800aab46c9d11efb527647 427 PRINTS PR01486 Bacterial phospholipase A1 protein signature 337 355 6.6E-9 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL504_RS27255 af3f7f27e2800aab46c9d11efb527647 427 PRINTS PR01486 Bacterial phospholipase A1 protein signature 285 299 6.6E-9 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL504_RS27255 af3f7f27e2800aab46c9d11efb527647 427 PRINTS PR01486 Bacterial phospholipase A1 protein signature 207 224 6.6E-9 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL504_RS27255 af3f7f27e2800aab46c9d11efb527647 427 PRINTS PR01486 Bacterial phospholipase A1 protein signature 397 417 6.6E-9 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL504_RS27255 af3f7f27e2800aab46c9d11efb527647 427 Pfam PF02253 Phospholipase A1 209 425 2.7E-34 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL504_RS27255 af3f7f27e2800aab46c9d11efb527647 427 Gene3D G3DSA:2.40.230.10 178 427 4.4E-53 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL504_RS27255 af3f7f27e2800aab46c9d11efb527647 427 SUPERFAMILY SSF56931 187 426 4.05E-54 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL504_RS20155 c2c5d9822c2421ed09463920b67784cf 196 Gene3D G3DSA:1.10.10.60 3 59 1.5E-15 T 28-03-2018 AL504_RS20155 c2c5d9822c2421ed09463920b67784cf 196 Gene3D G3DSA:1.10.357.10 60 187 7.6E-20 T 28-03-2018 AL504_RS20155 c2c5d9822c2421ed09463920b67784cf 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS20155 c2c5d9822c2421ed09463920b67784cf 196 SUPERFAMILY SSF48498 79 186 6.16E-19 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS20155 c2c5d9822c2421ed09463920b67784cf 196 SUPERFAMILY SSF46689 5 76 3.08E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS20155 c2c5d9822c2421ed09463920b67784cf 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.1E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS20155 c2c5d9822c2421ed09463920b67784cf 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.1E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01705 68946e4613302f75b47f9b471b7a98e0 328 SUPERFAMILY SSF53850 119 291 2.17E-10 T 28-03-2018 AL504_RS01705 68946e4613302f75b47f9b471b7a98e0 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 323 1.1E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01705 68946e4613302f75b47f9b471b7a98e0 328 Gene3D G3DSA:3.40.190.10 136 301 2.5E-10 T 28-03-2018 AL504_RS01705 68946e4613302f75b47f9b471b7a98e0 328 PIRSF PIRSF017082 1 327 5.9E-86 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10610 1993d78449c58a15b0c0e3f446f1a6bc 100 SUPERFAMILY SSF54909 1 96 3.69E-18 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS10610 1993d78449c58a15b0c0e3f446f1a6bc 100 Gene3D G3DSA:3.30.70.100 1 100 7.9E-18 T 28-03-2018 AL504_RS10610 1993d78449c58a15b0c0e3f446f1a6bc 100 Pfam PF07876 Stress responsive A/B Barrel Domain 4 94 8.5E-11 T 28-03-2018 IPR013097 Stress responsive alpha-beta barrel AL504_RS10610 1993d78449c58a15b0c0e3f446f1a6bc 100 SMART SM00886 2 96 4.8E-16 T 28-03-2018 IPR013097 Stress responsive alpha-beta barrel AL504_RS01535 5fa76c1d135692423c31e2bb06c6c41f 178 SMART SM00260 16 157 8.8E-6 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01535 5fa76c1d135692423c31e2bb06c6c41f 178 Pfam PF01584 CheW-like domain 21 158 9.1E-22 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01535 5fa76c1d135692423c31e2bb06c6c41f 178 SUPERFAMILY SSF50341 21 162 2.75E-23 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL504_RS01535 5fa76c1d135692423c31e2bb06c6c41f 178 Gene3D G3DSA:2.40.50.180 39 135 1.2E-12 T 28-03-2018 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 2.6E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 2.6E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 2.6E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 2.6E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 176 1.4E-18 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 Gene3D G3DSA:1.10.287.950 317 539 1.5E-48 T 28-03-2018 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 Gene3D G3DSA:1.10.287.950 156 316 1.9E-8 T 28-03-2018 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 SMART SM00304 210 262 1.2E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 SMART SM00283 270 538 1.4E-48 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 504 6.3E-34 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS01530 94bcf06d51adfc647761a6399d5aa959 539 SUPERFAMILY SSF58104 230 539 1.18E-61 T 28-03-2018 AL504_RS16385 7ba401caca134749129cf52ecac71a22 221 Gene3D G3DSA:1.10.3720.10 1 220 1.2E-41 T 28-03-2018 AL504_RS16385 7ba401caca134749129cf52ecac71a22 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 6.6E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS16385 7ba401caca134749129cf52ecac71a22 221 SUPERFAMILY SSF161098 12 214 1.44E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16385 7ba401caca134749129cf52ecac71a22 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 5.4E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07770 ec81d6d246469774fef9ec68bd8b1675 295 Pfam PF00892 EamA-like transporter family 7 133 8.5E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS07770 ec81d6d246469774fef9ec68bd8b1675 295 Pfam PF00892 EamA-like transporter family 150 286 4.8E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS07770 ec81d6d246469774fef9ec68bd8b1675 295 SUPERFAMILY SSF103481 38 135 4.32E-15 T 28-03-2018 AL504_RS07770 ec81d6d246469774fef9ec68bd8b1675 295 SUPERFAMILY SSF103481 192 287 1.9E-12 T 28-03-2018 AL504_RS17090 82b7d2d0a25fc3ac5b58a770b3e7edca 318 SUPERFAMILY SSF52283 2 127 3.83E-23 T 28-03-2018 AL504_RS17090 82b7d2d0a25fc3ac5b58a770b3e7edca 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 312 4.9E-13 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS17090 82b7d2d0a25fc3ac5b58a770b3e7edca 318 Gene3D G3DSA:3.40.50.720 1 118 6.0E-30 T 28-03-2018 AL504_RS17090 82b7d2d0a25fc3ac5b58a770b3e7edca 318 SUPERFAMILY SSF51735 107 286 7.53E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS17090 82b7d2d0a25fc3ac5b58a770b3e7edca 318 Gene3D G3DSA:3.40.50.720 119 287 3.2E-50 T 28-03-2018 AL504_RS17090 82b7d2d0a25fc3ac5b58a770b3e7edca 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL504_RS17090 82b7d2d0a25fc3ac5b58a770b3e7edca 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 286 3.3E-53 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS23470 fc33422a98125b650cf685bf38828783 236 Pfam PF00005 ABC transporter 22 164 2.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23470 fc33422a98125b650cf685bf38828783 236 Gene3D G3DSA:3.40.50.300 1 231 2.2E-53 T 28-03-2018 AL504_RS23470 fc33422a98125b650cf685bf38828783 236 SMART SM00382 29 213 2.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23470 fc33422a98125b650cf685bf38828783 236 SUPERFAMILY SSF52540 4 227 9.2E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23470 fc33422a98125b650cf685bf38828783 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 249 3.9E-57 T 28-03-2018 AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 SUPERFAMILY SSF51735 11 251 2.88E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.2E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 Gene3D G3DSA:3.40.50.720 52 257 1.5E-54 T 28-03-2018 AL504_RS15965 c29bbed1d4c7953bba924adb78c9d8fc 268 Gene3D G3DSA:3.40.50.720 7 51 2.9E-9 T 28-03-2018 AL504_RS27185 a852063047bc6ebba6660e6765bb05d9 254 Pfam PF12697 Alpha/beta hydrolase family 15 243 5.2E-19 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS27185 a852063047bc6ebba6660e6765bb05d9 254 Gene3D G3DSA:3.40.50.1820 3 251 1.4E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS27185 a852063047bc6ebba6660e6765bb05d9 254 SUPERFAMILY SSF53474 5 248 1.35E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16095 97d21495c39e4ae72e09c87d35116d43 408 SUPERFAMILY SSF56266 16 405 8.37E-135 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS16095 97d21495c39e4ae72e09c87d35116d43 408 Pfam PF01960 ArgJ family 22 408 1.2E-138 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS16095 97d21495c39e4ae72e09c87d35116d43 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 155.258 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS16095 97d21495c39e4ae72e09c87d35116d43 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 406 6.0E-172 T 28-03-2018 AL504_RS16095 97d21495c39e4ae72e09c87d35116d43 408 Gene3D G3DSA:3.60.70.12 8 279 2.9E-103 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS16095 97d21495c39e4ae72e09c87d35116d43 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 408 1.7E-118 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS11605 78e4cc34011a1d2ae936bbd66d22df4e 254 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 24 250 2.1E-75 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL504_RS11605 78e4cc34011a1d2ae936bbd66d22df4e 254 Gene3D G3DSA:3.60.140.10 5 254 4.2E-90 T 28-03-2018 AL504_RS11605 78e4cc34011a1d2ae936bbd66d22df4e 254 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 32 251 1.4E-49 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL504_RS11605 78e4cc34011a1d2ae936bbd66d22df4e 254 SUPERFAMILY SSF64438 10 252 1.01E-76 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL504_RS14100 5a9cc7885d87bebc438e3a90b0ec26f7 395 SUPERFAMILY SSF56796 22 394 2.49E-68 T 28-03-2018 AL504_RS14100 5a9cc7885d87bebc438e3a90b0ec26f7 395 Gene3D G3DSA:3.40.50.1970 23 200 9.1E-30 T 28-03-2018 AL504_RS14100 5a9cc7885d87bebc438e3a90b0ec26f7 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 23 382 1.9E-67 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL504_RS14100 5a9cc7885d87bebc438e3a90b0ec26f7 395 Gene3D G3DSA:1.20.1090.10 202 395 5.4E-33 T 28-03-2018 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 483 36.818 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 Gene3D G3DSA:3.40.50.620 1 322 2.6E-73 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 SUPERFAMILY SSF47323 333 482 2.09E-31 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 Gene3D G3DSA:1.20.120.640 323 406 1.3E-17 T 28-03-2018 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 330 3.3E-109 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 SUPERFAMILY SSF52374 2 331 2.31E-83 T 28-03-2018 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 Pfam PF09190 DALR domain 359 413 1.0E-15 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 6.1E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.1E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 6.1E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.1E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 SMART SM00840 359 414 7.5E-23 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL504_RS28095 db251d59cf6460aeb795b2056f722723 484 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 483 1.3E-146 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL504_RS25575 5895e886591e88d5c5ab6c06ada6e001 341 Gene3D G3DSA:3.40.50.300 127 334 7.1E-30 T 28-03-2018 AL504_RS25575 5895e886591e88d5c5ab6c06ada6e001 341 SUPERFAMILY SSF52540 130 309 2.43E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25575 5895e886591e88d5c5ab6c06ada6e001 341 Pfam PF02562 PhoH-like protein 131 334 4.3E-95 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 AL504_RS16520 52b15067177a187093bc4cbf704e23a6 174 SUPERFAMILY SSF88659 96 166 2.62E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS16520 52b15067177a187093bc4cbf704e23a6 174 Gene3D G3DSA:1.10.1740.10 3 80 4.2E-15 T 28-03-2018 AL504_RS16520 52b15067177a187093bc4cbf704e23a6 174 Pfam PF04542 Sigma-70 region 2 15 83 5.1E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS16520 52b15067177a187093bc4cbf704e23a6 174 Pfam PF08281 Sigma-70, region 4 116 166 4.2E-11 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS16520 52b15067177a187093bc4cbf704e23a6 174 Gene3D G3DSA:1.10.10.10 81 168 1.1E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16520 52b15067177a187093bc4cbf704e23a6 174 SUPERFAMILY SSF88946 10 103 2.2E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS16520 52b15067177a187093bc4cbf704e23a6 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 166 3.8E-22 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 Gene3D G3DSA:3.40.1020.10 353 528 3.3E-71 T 28-03-2018 AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 Gene3D G3DSA:3.40.50.1100 48 162 6.3E-31 T 28-03-2018 AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 SUPERFAMILY SSF53686 19 379 5.5E-94 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 445 527 1.6E-20 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 345 433 2.0E-24 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 26 527 1.2E-232 T 28-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 Gene3D G3DSA:3.40.50.1100 163 341 1.9E-43 T 28-03-2018 AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 40 331 8.7E-75 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS03355 4872ab1bfb55aefc88a7e663497bfb4c 528 SUPERFAMILY SSF55021 434 527 7.55E-25 T 28-03-2018 AL504_RS04560 31148e030d5619102802424d95e6cf31 326 SUPERFAMILY SSF53850 113 284 1.22E-16 T 28-03-2018 AL504_RS04560 31148e030d5619102802424d95e6cf31 326 PIRSF PIRSF017082 1 324 1.6E-86 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04560 31148e030d5619102802424d95e6cf31 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 8.9E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04560 31148e030d5619102802424d95e6cf31 326 Gene3D G3DSA:3.40.190.10 124 281 1.1E-15 T 28-03-2018 AL504_RS00950 5a785c8de1e4361141c8c6dbae4461e8 256 Gene3D G3DSA:3.60.15.10 18 235 1.5E-33 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00950 5a785c8de1e4361141c8c6dbae4461e8 256 SMART SM00849 23 208 1.4E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00950 5a785c8de1e4361141c8c6dbae4461e8 256 SUPERFAMILY SSF56281 21 213 1.57E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS00950 5a785c8de1e4361141c8c6dbae4461e8 256 Pfam PF00753 Metallo-beta-lactamase superfamily 24 194 1.2E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS27620 1819e4630c2321914d1d66b1380c9e5e 320 PIRSF PIRSF018266 6 320 2.3E-75 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS27620 1819e4630c2321914d1d66b1380c9e5e 320 Pfam PF04773 FecR protein 115 207 8.1E-15 T 28-03-2018 IPR006860 FecR protein AL504_RS27620 1819e4630c2321914d1d66b1380c9e5e 320 Pfam PF16220 Domain of unknown function (DUF4880) 18 57 2.9E-12 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS20520 8ce3951486131e68f513c913c2f17981 270 SUPERFAMILY SSF53822 10 270 2.95E-37 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS20520 8ce3951486131e68f513c913c2f17981 270 Gene3D G3DSA:3.40.50.2300 8 110 3.6E-11 T 28-03-2018 AL504_RS20520 8ce3951486131e68f513c913c2f17981 270 Gene3D G3DSA:3.40.50.2300 111 270 2.9E-36 T 28-03-2018 AL504_RS20520 8ce3951486131e68f513c913c2f17981 270 Pfam PF13377 Periplasmic binding protein-like domain 111 263 3.1E-27 T 28-03-2018 AL504_RS01685 e0893a8f718f85df263d92df1d058bed 467 Gene3D G3DSA:3.30.70.360 205 368 5.7E-46 T 28-03-2018 AL504_RS01685 e0893a8f718f85df263d92df1d058bed 467 Gene3D G3DSA:3.40.630.10 9 204 6.3E-35 T 28-03-2018 AL504_RS01685 e0893a8f718f85df263d92df1d058bed 467 Pfam PF07687 Peptidase dimerisation domain 199 357 3.1E-19 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS01685 e0893a8f718f85df263d92df1d058bed 467 SUPERFAMILY SSF53187 372 457 6.86E-58 T 28-03-2018 AL504_RS01685 e0893a8f718f85df263d92df1d058bed 467 SUPERFAMILY SSF53187 7 201 6.86E-58 T 28-03-2018 AL504_RS01685 e0893a8f718f85df263d92df1d058bed 467 Pfam PF01546 Peptidase family M20/M25/M40 87 455 2.3E-32 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS05520 84662dc91630705545ea378f0dfebac2 239 Gene3D G3DSA:1.10.10.10 127 238 8.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05520 84662dc91630705545ea378f0dfebac2 239 SUPERFAMILY SSF52172 14 123 2.49E-6 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS05520 84662dc91630705545ea378f0dfebac2 239 SUPERFAMILY SSF46894 151 237 2.44E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS05520 84662dc91630705545ea378f0dfebac2 239 Gene3D G3DSA:3.40.50.2300 5 124 1.2E-6 T 28-03-2018 AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 SMART SM00895 88 212 6.1E-11 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 SMART SM00345 20 78 1.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 SUPERFAMILY SSF46785 19 82 4.36E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 Gene3D G3DSA:1.20.120.530 75 227 1.5E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 78 5.6E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 Pfam PF07729 FCD domain 88 210 6.4E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 Gene3D G3DSA:1.10.10.10 1 74 4.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07450 aa7043a4df96711b755bc2f9eca623eb 227 SUPERFAMILY SSF48008 85 218 1.41E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 Pfam PF13365 Trypsin-like peptidase domain 121 254 2.5E-34 T 28-03-2018 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 SMART SM00228 404 479 5.4E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 SMART SM00228 293 375 4.7E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 SUPERFAMILY SSF50156 274 383 1.24E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 Gene3D G3DSA:2.30.42.10 402 487 8.1E-17 T 28-03-2018 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 Gene3D G3DSA:2.40.10.10 187 287 2.4E-36 T 28-03-2018 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 Gene3D G3DSA:2.40.10.10 61 186 1.4E-36 T 28-03-2018 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 Gene3D G3DSA:2.30.42.10 288 397 2.1E-26 T 28-03-2018 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 SUPERFAMILY SSF50494 118 302 2.11E-62 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 SUPERFAMILY SSF50494 51 84 2.11E-62 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 PRINTS PR00834 HtrA/DegQ protease family signature 333 345 1.6E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 PRINTS PR00834 HtrA/DegQ protease family signature 225 242 1.6E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 1.6E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 1.6E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 1.6E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 PRINTS PR00834 HtrA/DegQ protease family signature 247 264 1.6E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 SUPERFAMILY SSF50156 404 488 2.63E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 65 484 1.6E-145 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 Pfam PF13180 PDZ domain 294 381 2.1E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS11135 72fc235bd0f4564951229d8a0d822082 489 Pfam PF13180 PDZ domain 406 488 1.7E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS26915 3e329933b7bc6e25c930486d622c05aa 382 Pfam PF07690 Major Facilitator Superfamily 5 344 4.0E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS26915 3e329933b7bc6e25c930486d622c05aa 382 Gene3D G3DSA:1.20.1250.20 185 376 2.0E-12 T 28-03-2018 AL504_RS26915 3e329933b7bc6e25c930486d622c05aa 382 Gene3D G3DSA:1.20.1250.20 1 179 3.2E-28 T 28-03-2018 AL504_RS26915 3e329933b7bc6e25c930486d622c05aa 382 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 374 3.1E-91 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL504_RS26915 3e329933b7bc6e25c930486d622c05aa 382 SUPERFAMILY SSF103473 3 372 1.31E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS00475 14f56a5ef32d90e8074318afb9fb20e2 281 SUPERFAMILY SSF89550 6 86 1.18E-50 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL504_RS00475 14f56a5ef32d90e8074318afb9fb20e2 281 SUPERFAMILY SSF89550 169 280 1.18E-50 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL504_RS00475 14f56a5ef32d90e8074318afb9fb20e2 281 Gene3D G3DSA:3.20.20.140 5 266 3.1E-43 T 28-03-2018 AL504_RS00475 14f56a5ef32d90e8074318afb9fb20e2 281 Pfam PF02811 PHP domain 9 120 2.4E-8 T 28-03-2018 IPR004013 PHP domain GO:0003824 AL504_RS00475 14f56a5ef32d90e8074318afb9fb20e2 281 SMART SM00481 8 73 1.1E-14 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL504_RS21180 dbd3c87da1ddceb27907595b53c199c9 183 Pfam PF00156 Phosphoribosyl transferase domain 50 158 1.1E-17 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL504_RS21180 dbd3c87da1ddceb27907595b53c199c9 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.31 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL504_RS21180 dbd3c87da1ddceb27907595b53c199c9 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 178 2.3E-68 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL504_RS21180 dbd3c87da1ddceb27907595b53c199c9 183 SUPERFAMILY SSF53271 10 179 2.75E-54 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL504_RS21180 dbd3c87da1ddceb27907595b53c199c9 183 Gene3D G3DSA:3.40.50.2020 2 183 1.7E-44 T 28-03-2018 AL504_RS08600 c041268514e2f7c2e59900ad15622949 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 51.571 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL504_RS08600 c041268514e2f7c2e59900ad15622949 358 Gene3D G3DSA:3.40.718.10 1 358 8.1E-125 T 28-03-2018 AL504_RS08600 c041268514e2f7c2e59900ad15622949 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL504_RS08600 c041268514e2f7c2e59900ad15622949 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 2.4E-149 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL504_RS08600 c041268514e2f7c2e59900ad15622949 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 353 1.9E-133 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS08600 c041268514e2f7c2e59900ad15622949 358 SUPERFAMILY SSF53659 1 357 1.69E-122 T 28-03-2018 AL504_RS08600 c041268514e2f7c2e59900ad15622949 358 SMART SM01329 4 353 3.0E-207 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL504_RS14890 dd8035dd3cf846cac6c67400f9850df5 262 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL504_RS14890 dd8035dd3cf846cac6c67400f9850df5 262 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 260 8.2E-84 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL504_RS14890 dd8035dd3cf846cac6c67400f9850df5 262 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 260 20.698 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL504_RS14890 dd8035dd3cf846cac6c67400f9850df5 262 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 8.5E-85 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL504_RS12700 5350580790aa96e2496e1520925f1d90 296 SUPERFAMILY SSF88713 70 289 1.58E-44 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS12700 5350580790aa96e2496e1520925f1d90 296 Pfam PF01522 Polysaccharide deacetylase 73 176 2.2E-17 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL504_RS12700 5350580790aa96e2496e1520925f1d90 296 Gene3D G3DSA:3.20.20.370 29 295 1.2E-45 T 28-03-2018 AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 396 3.0E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 341 2.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 2.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 2.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 Gene3D G3DSA:1.10.287.130 172 254 7.9E-6 T 28-03-2018 AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 SMART SM00387 288 397 2.2E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 SUPERFAMILY SSF55874 275 395 3.41E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 Gene3D G3DSA:3.30.565.10 255 397 1.1E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS25025 d287ea81ecc93822f4d8667f80ab9dfd 400 SUPERFAMILY SSF47384 197 241 2.75E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS24530 3b16b087b8f8d156b66ba4df11876c6d 422 Gene3D G3DSA:1.10.10.10 364 416 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24530 3b16b087b8f8d156b66ba4df11876c6d 422 SMART SM01012 359 414 2.0E-15 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL504_RS24530 3b16b087b8f8d156b66ba4df11876c6d 422 SUPERFAMILY SSF52172 341 414 7.45E-13 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS24530 3b16b087b8f8d156b66ba4df11876c6d 422 Pfam PF03861 ANTAR domain 364 414 4.7E-17 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL504_RS24530 3b16b087b8f8d156b66ba4df11876c6d 422 Pfam PF08376 Nitrate and nitrite sensing 39 281 4.9E-39 T 28-03-2018 IPR013587 Nitrate/nitrite sensing protein AL504_RS07975 f71efc9f1433a02ac7fe21fb03971ba0 299 Gene3D G3DSA:3.40.1130.10 51 270 1.2E-23 T 28-03-2018 AL504_RS07975 f71efc9f1433a02ac7fe21fb03971ba0 299 Pfam PF01553 Acyltransferase 87 202 1.4E-12 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS07975 f71efc9f1433a02ac7fe21fb03971ba0 299 SMART SM00563 97 205 5.1E-19 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS07975 f71efc9f1433a02ac7fe21fb03971ba0 299 SUPERFAMILY SSF69593 67 240 7.19E-24 T 28-03-2018 AL504_RS16190 8030d2742cc833bc09fbd3ce3a448c30 484 Gene3D G3DSA:1.20.1250.20 19 212 5.8E-31 T 28-03-2018 AL504_RS16190 8030d2742cc833bc09fbd3ce3a448c30 484 Pfam PF07690 Major Facilitator Superfamily 31 237 6.0E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS16190 8030d2742cc833bc09fbd3ce3a448c30 484 Pfam PF07690 Major Facilitator Superfamily 289 474 1.5E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS16190 8030d2742cc833bc09fbd3ce3a448c30 484 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 32 433 2.3E-69 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS16190 8030d2742cc833bc09fbd3ce3a448c30 484 Gene3D G3DSA:1.20.1250.20 271 482 6.8E-21 T 28-03-2018 AL504_RS16190 8030d2742cc833bc09fbd3ce3a448c30 484 SUPERFAMILY SSF103473 26 215 4.32E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS16190 8030d2742cc833bc09fbd3ce3a448c30 484 SUPERFAMILY SSF103473 261 466 4.32E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS06690 6b7e242a8945340ab8e932dfceb33f82 83 Pfam PF04226 Transglycosylase associated protein 33 79 1.8E-16 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 Gene3D G3DSA:2.40.110.10 135 233 3.7E-31 T 28-03-2018 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 SUPERFAMILY SSF56645 7 243 3.01E-76 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 SUPERFAMILY SSF47203 246 395 2.42E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 7.5E-34 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 Gene3D G3DSA:1.10.540.10 1 134 5.4E-38 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 Gene3D G3DSA:1.20.140.10 234 397 3.6E-37 T 28-03-2018 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 389 4.3E-29 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS26180 01839ec751e371794df6407303b54ed5 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 231 7.3E-21 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS24065 8747b946ad381f66e1592cb9c1191a67 222 SUPERFAMILY SSF51182 119 216 7.63E-12 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS24065 8747b946ad381f66e1592cb9c1191a67 222 Pfam PF12973 ChrR Cupin-like domain 19 108 1.1E-37 T 28-03-2018 IPR025979 ChrR-like cupin domain AL504_RS24065 8747b946ad381f66e1592cb9c1191a67 222 Pfam PF12973 ChrR Cupin-like domain 132 212 7.8E-7 T 28-03-2018 IPR025979 ChrR-like cupin domain AL504_RS24065 8747b946ad381f66e1592cb9c1191a67 222 SUPERFAMILY SSF51182 4 124 1.97E-31 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS24065 8747b946ad381f66e1592cb9c1191a67 222 Gene3D G3DSA:2.60.120.10 118 221 0.073 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS24065 8747b946ad381f66e1592cb9c1191a67 222 Gene3D G3DSA:2.60.120.10 3 117 1.7E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS00720 7599f8e214f7a82154b89d67c0f38610 142 Pfam PF13202 EF hand 103 118 3.6E-5 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 AL504_RS00720 7599f8e214f7a82154b89d67c0f38610 142 Gene3D G3DSA:1.10.238.10 81 108 2.9E-6 T 28-03-2018 AL504_RS00720 7599f8e214f7a82154b89d67c0f38610 142 SUPERFAMILY SSF47473 67 124 1.33E-10 T 28-03-2018 IPR011992 EF-hand domain pair AL504_RS00720 7599f8e214f7a82154b89d67c0f38610 142 Gene3D G3DSA:1.10.238.10 23 80 0.16 T 28-03-2018 AL504_RS00720 7599f8e214f7a82154b89d67c0f38610 142 Gene3D G3DSA:1.10.238.10 109 137 3.0E-4 T 28-03-2018 AL504_RS00720 7599f8e214f7a82154b89d67c0f38610 142 ProSitePatterns PS00018 EF-hand calcium-binding domain. 105 117 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site AL504_RS28785 53352641ce4fb0ca1652447f110db445 320 SUPERFAMILY SSF51735 8 187 3.66E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28785 53352641ce4fb0ca1652447f110db445 320 Gene3D G3DSA:1.10.1040.10 190 320 2.7E-18 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS28785 53352641ce4fb0ca1652447f110db445 320 SUPERFAMILY SSF48179 190 260 4.08E-14 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS28785 53352641ce4fb0ca1652447f110db445 320 Gene3D G3DSA:3.40.50.720 1 187 1.1E-41 T 28-03-2018 AL504_RS28785 53352641ce4fb0ca1652447f110db445 320 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 278 5.1E-16 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS28785 53352641ce4fb0ca1652447f110db445 320 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 211 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS28785 53352641ce4fb0ca1652447f110db445 320 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 185 6.2E-47 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS13665 8b1917f3d59282aa9225c957c1b204d2 366 Pfam PF00561 alpha/beta hydrolase fold 103 199 3.5E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS13665 8b1917f3d59282aa9225c957c1b204d2 366 PIRSF PIRSF005211 3 366 1.6E-117 T 28-03-2018 IPR012020 AB hydrolase 4 family AL504_RS13665 8b1917f3d59282aa9225c957c1b204d2 366 SUPERFAMILY SSF53474 96 343 1.75E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS13665 8b1917f3d59282aa9225c957c1b204d2 366 Gene3D G3DSA:3.40.50.1820 82 353 7.3E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 638 4.2E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 Pfam PF07730 Histidine kinase 440 506 2.8E-13 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 Gene3D G3DSA:3.30.565.10 504 645 6.1E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 SMART SM00304 199 251 2.0E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 SUPERFAMILY SSF55874 515 638 1.15E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 SMART SM00065 286 433 2.7E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 SUPERFAMILY SSF55781 286 436 2.16E-19 T 28-03-2018 IPR029016 GAF domain-like AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 Pfam PF13185 GAF domain 286 424 5.9E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 Gene3D G3DSA:3.30.450.40 236 434 3.9E-28 T 28-03-2018 IPR029016 GAF domain-like AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 SMART SM00387 546 641 5.8E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 Pfam PF00672 HAMP domain 200 247 4.2E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 PIRSF PIRSF003167 7 645 7.9E-190 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 44 153 4.2E-23 T 28-03-2018 IPR029095 NarX-like, N-terminal AL504_RS02720 254086ff57cbf41dc009fa9e03b88851 645 SUPERFAMILY SSF158472 200 249 1.11E-9 T 28-03-2018 AL504_RS08235 c850a1df4a264be922ef708af791eca3 303 SUPERFAMILY SSF103481 188 288 7.59E-9 T 28-03-2018 AL504_RS08235 c850a1df4a264be922ef708af791eca3 303 Pfam PF00892 EamA-like transporter family 14 141 2.6E-22 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS08235 c850a1df4a264be922ef708af791eca3 303 Pfam PF00892 EamA-like transporter family 154 287 4.4E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS08235 c850a1df4a264be922ef708af791eca3 303 SUPERFAMILY SSF103481 52 143 1.57E-13 T 28-03-2018 AL504_RS24945 73268dfdfb4c51bb25f603f96db760ae 156 SMART SM00347 34 134 1.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24945 73268dfdfb4c51bb25f603f96db760ae 156 Pfam PF13463 Winged helix DNA-binding domain 45 107 1.2E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24945 73268dfdfb4c51bb25f603f96db760ae 156 Gene3D G3DSA:1.10.10.10 10 147 5.4E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24945 73268dfdfb4c51bb25f603f96db760ae 156 SUPERFAMILY SSF46785 15 144 4.1E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 Pfam PF00072 Response regulator receiver domain 12 119 2.0E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 SUPERFAMILY SSF46894 156 239 1.76E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 SUPERFAMILY SSF52172 10 133 5.41E-30 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 SMART SM00862 162 238 1.5E-11 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 238 5.6E-10 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 Gene3D G3DSA:3.40.50.2300 8 132 1.7E-27 T 28-03-2018 AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 Gene3D G3DSA:1.10.10.10 133 240 8.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08640 3ea07c284a4d704901c8b6a6dec28b60 240 SMART SM00448 8 119 1.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS29615 ae7de23910d4e50e84dcb891a24d2a3d 244 Pfam PF00561 alpha/beta hydrolase fold 54 157 1.8E-14 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS29615 ae7de23910d4e50e84dcb891a24d2a3d 244 Gene3D G3DSA:3.40.50.1820 3 244 2.9E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29615 ae7de23910d4e50e84dcb891a24d2a3d 244 SUPERFAMILY SSF53474 2 241 9.7E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15115 771e5df31cde400fe6ccd654b28d140f 300 Gene3D G3DSA:1.10.3470.10 2 293 3.1E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS15115 771e5df31cde400fe6ccd654b28d140f 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 288 4.4E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 SUPERFAMILY SSF51905 3 250 4.36E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 343 3.9E-126 T 28-03-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 Gene3D G3DSA:3.50.50.60 3 211 2.8E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 Gene3D G3DSA:3.50.50.60 212 423 5.2E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 SUPERFAMILY SSF51905 261 350 3.14E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.0E-5 T 28-03-2018 AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 196 214 1.0E-5 T 28-03-2018 AL504_RS03250 4d636d1a8a16b6a6a80e47c9a0f84082 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.0E-5 T 28-03-2018 AL504_RS23125 237a36648dc4ccb4235251fdb5779f19 371 Pfam PF13579 Glycosyl transferase 4-like domain 13 172 2.3E-12 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS23125 237a36648dc4ccb4235251fdb5779f19 371 SUPERFAMILY SSF53756 2 366 1.73E-70 T 28-03-2018 AL504_RS23125 237a36648dc4ccb4235251fdb5779f19 371 Gene3D G3DSA:3.40.50.2000 198 351 3.9E-38 T 28-03-2018 AL504_RS23125 237a36648dc4ccb4235251fdb5779f19 371 Gene3D G3DSA:3.40.50.2000 1 197 2.9E-24 T 28-03-2018 AL504_RS23125 237a36648dc4ccb4235251fdb5779f19 371 Pfam PF00534 Glycosyl transferases group 1 190 343 1.3E-30 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 Gene3D G3DSA:1.10.10.10 4 90 6.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 Pfam PF03466 LysR substrate binding domain 94 301 2.6E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 Gene3D G3DSA:3.40.190.10 94 181 3.3E-16 T 28-03-2018 AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 SUPERFAMILY SSF53850 95 302 7.78E-44 T 28-03-2018 AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 SUPERFAMILY SSF46785 11 118 2.06E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 2.4E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22800 97f3c8803a869adfc39100130c0f6bce 303 Gene3D G3DSA:3.40.190.10 182 270 8.5E-22 T 28-03-2018 AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 Gene3D G3DSA:3.40.50.300 345 595 1.9E-56 T 28-03-2018 AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 SUPERFAMILY SSF52540 349 589 5.63E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 Gene3D G3DSA:1.20.1560.10 20 344 1.5E-34 T 28-03-2018 AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 SUPERFAMILY SSF90123 28 343 4.45E-47 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 Pfam PF00005 ABC transporter 370 519 2.1E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 SMART SM00382 379 565 4.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04385 3de52795b3bd4f28cc6d7020e3fabfb8 605 Pfam PF00664 ABC transporter transmembrane region 40 310 3.1E-18 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS10920 12bacca4229210c711ee6c044ea0454e 284 Gene3D G3DSA:1.10.10.10 28 106 3.3E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10920 12bacca4229210c711ee6c044ea0454e 284 SUPERFAMILY SSF46785 45 117 4.53E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10920 12bacca4229210c711ee6c044ea0454e 284 SMART SM00346 45 135 2.8E-17 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS10920 12bacca4229210c711ee6c044ea0454e 284 Pfam PF09339 IclR helix-turn-helix domain 47 98 7.8E-15 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS10920 12bacca4229210c711ee6c044ea0454e 284 Gene3D G3DSA:3.30.450.40 115 279 1.8E-35 T 28-03-2018 IPR029016 GAF domain-like AL504_RS10920 12bacca4229210c711ee6c044ea0454e 284 SUPERFAMILY SSF55781 117 279 2.22E-31 T 28-03-2018 IPR029016 GAF domain-like AL504_RS10920 12bacca4229210c711ee6c044ea0454e 284 Pfam PF01614 Bacterial transcriptional regulator 177 275 1.3E-8 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 Gene3D G3DSA:1.20.1250.20 16 209 3.0E-19 T 28-03-2018 AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 Gene3D G3DSA:1.20.1250.20 210 393 1.4E-15 T 28-03-2018 AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 SUPERFAMILY SSF103473 10 389 8.11E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 PRINTS PR01035 Tetracycline resistance protein signature 37 53 1.3E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 PRINTS PR01035 Tetracycline resistance protein signature 152 174 1.3E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 PRINTS PR01035 Tetracycline resistance protein signature 256 276 1.3E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 PRINTS PR01035 Tetracycline resistance protein signature 122 143 1.3E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS07165 afc75a9f2cc0b5d0526d1ae519324dac 395 Pfam PF07690 Major Facilitator Superfamily 29 336 9.3E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS21030 ec17fc329314f4215d4e81d6f90b03a7 191 SUPERFAMILY SSF46689 4 72 7.09E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS21030 ec17fc329314f4215d4e81d6f90b03a7 191 Gene3D G3DSA:1.10.10.60 2 54 4.0E-11 T 28-03-2018 AL504_RS21030 ec17fc329314f4215d4e81d6f90b03a7 191 SUPERFAMILY SSF48498 83 181 3.6E-8 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS21030 ec17fc329314f4215d4e81d6f90b03a7 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 7.4E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS21030 ec17fc329314f4215d4e81d6f90b03a7 191 Gene3D G3DSA:1.10.357.10 55 179 1.7E-11 T 28-03-2018 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 1.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 Pfam PF03466 LysR substrate binding domain 88 280 3.1E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 Gene3D G3DSA:3.40.190.10 87 170 1.1E-15 T 28-03-2018 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 Gene3D G3DSA:3.40.190.10 171 251 7.9E-19 T 28-03-2018 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 SUPERFAMILY SSF46785 2 78 4.88E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 SUPERFAMILY SSF53850 88 282 5.19E-31 T 28-03-2018 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 4.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00405 f425ba6cb0fcdf55549e0802613374a3 285 Gene3D G3DSA:1.10.10.10 1 84 8.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11890 fe128cecdc6862d9b0681ea055152e80 300 Pfam PF04951 D-aminopeptidase 1 290 1.4E-95 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase AL504_RS11890 fe128cecdc6862d9b0681ea055152e80 300 Gene3D G3DSA:3.30.1360.130 237 296 1.3E-13 T 28-03-2018 AL504_RS11890 fe128cecdc6862d9b0681ea055152e80 300 PIRSF PIRSF015853 226 300 7.4E-13 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase AL504_RS11890 fe128cecdc6862d9b0681ea055152e80 300 PIRSF PIRSF015853 1 220 1.5E-87 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase AL504_RS11890 fe128cecdc6862d9b0681ea055152e80 300 Gene3D G3DSA:3.40.50.10780 1 212 1.4E-81 T 28-03-2018 IPR027476 D-aminopeptidase, N-terminal AL504_RS11890 fe128cecdc6862d9b0681ea055152e80 300 SUPERFAMILY SSF63992 1 206 5.62E-98 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase AL504_RS11890 fe128cecdc6862d9b0681ea055152e80 300 SUPERFAMILY SSF63992 235 300 5.62E-98 T 28-03-2018 IPR007035 Peptidase M55, D-aminopeptidase AL504_RS04895 3638e86f183b2f71c990e4c4a2f38b90 241 Gene3D G3DSA:1.10.760.10 24 115 1.9E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04895 3638e86f183b2f71c990e4c4a2f38b90 241 Gene3D G3DSA:1.10.760.10 119 221 3.2E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04895 3638e86f183b2f71c990e4c4a2f38b90 241 SUPERFAMILY SSF46626 137 221 9.75E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04895 3638e86f183b2f71c990e4c4a2f38b90 241 SUPERFAMILY SSF46626 47 119 1.89E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04895 3638e86f183b2f71c990e4c4a2f38b90 241 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 153 218 1.3E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04895 3638e86f183b2f71c990e4c4a2f38b90 241 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 48 111 5.9E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04895 3638e86f183b2f71c990e4c4a2f38b90 241 PIRSF PIRSF000005 7 224 1.0E-59 T 28-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL504_RS19385 a6756383bdb212e3d81947582869db04 322 Pfam PF16220 Domain of unknown function (DUF4880) 2 44 1.8E-12 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS19385 a6756383bdb212e3d81947582869db04 322 PIRSF PIRSF018266 1 316 1.1E-82 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS19385 a6756383bdb212e3d81947582869db04 322 Pfam PF04773 FecR protein 111 203 1.1E-19 T 28-03-2018 IPR006860 FecR protein AL504_RS10505 eea2dc3305aab8daf1c7224182e77762 105 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 2.8E-35 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL504_RS28540 01a7bd1d18f708d74854b816537773a3 335 Gene3D G3DSA:1.20.58.340 149 268 3.1E-19 T 28-03-2018 AL504_RS28540 01a7bd1d18f708d74854b816537773a3 335 Gene3D G3DSA:3.30.460.20 2 142 9.2E-17 T 28-03-2018 AL504_RS28540 01a7bd1d18f708d74854b816537773a3 335 Gene3D G3DSA:1.20.58.340 269 335 1.8E-16 T 28-03-2018 AL504_RS28540 01a7bd1d18f708d74854b816537773a3 335 SUPERFAMILY SSF143865 13 262 6.54E-49 T 28-03-2018 AL504_RS28540 01a7bd1d18f708d74854b816537773a3 335 SUPERFAMILY SSF144083 271 332 7.98E-19 T 28-03-2018 AL504_RS28540 01a7bd1d18f708d74854b816537773a3 335 Pfam PF01544 CorA-like Mg2+ transporter protein 45 331 2.5E-50 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AL504_RS02495 b041a91e14f94ebd5bc675429de16caa 287 SUPERFAMILY SSF103481 182 282 5.36E-10 T 28-03-2018 AL504_RS02495 b041a91e14f94ebd5bc675429de16caa 287 Pfam PF00892 EamA-like transporter family 148 280 9.4E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS02495 b041a91e14f94ebd5bc675429de16caa 287 Pfam PF00892 EamA-like transporter family 6 134 2.0E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS02495 b041a91e14f94ebd5bc675429de16caa 287 SUPERFAMILY SSF103481 42 139 3.27E-7 T 28-03-2018 AL504_RS28075 e3ea9af1a60b2129a6bac095ac655482 287 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 6 284 17.879 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL504_RS28075 e3ea9af1a60b2129a6bac095ac655482 287 Pfam PF02673 Bacitracin resistance protein BacA 11 279 2.6E-82 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL504_RS17310 48539e8369b75f373295ee248b43aafb 390 SUPERFAMILY SSF51679 1 359 1.1E-90 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS17310 48539e8369b75f373295ee248b43aafb 390 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 358 9.1E-183 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AL504_RS17310 48539e8369b75f373295ee248b43aafb 390 Pfam PF00296 Luciferase-like monooxygenase 1 334 2.6E-84 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS17310 48539e8369b75f373295ee248b43aafb 390 Gene3D G3DSA:3.20.20.30 1 368 4.3E-87 T 28-03-2018 AL504_RS17310 48539e8369b75f373295ee248b43aafb 390 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 388 68.11 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AL504_RS19995 ef7cb5766f29cd23b9c50dbc00a83633 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 6 146 19.553 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AL504_RS19995 ef7cb5766f29cd23b9c50dbc00a83633 146 SUPERFAMILY SSF52080 7 144 1.83E-45 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P AL504_RS19995 ef7cb5766f29cd23b9c50dbc00a83633 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 5 145 4.6E-47 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19995 ef7cb5766f29cd23b9c50dbc00a83633 146 Gene3D G3DSA:3.100.10.10 45 146 1.4E-23 T 28-03-2018 AL504_RS19995 ef7cb5766f29cd23b9c50dbc00a83633 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 31 145 7.2E-29 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P AL504_RS26470 22e5be1e85ee9d83ff7fce1bd4d874c3 267 Gene3D G3DSA:3.40.630.30 23 206 2.8E-36 T 28-03-2018 AL504_RS26470 22e5be1e85ee9d83ff7fce1bd4d874c3 267 SUPERFAMILY SSF55729 26 232 1.36E-43 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS26470 22e5be1e85ee9d83ff7fce1bd4d874c3 267 Pfam PF13444 Acetyltransferase (GNAT) domain 42 143 1.7E-32 T 28-03-2018 AL504_RS30520 f9be694ccc5efb1903e8a024dac08851 427 SUPERFAMILY SSF103473 8 421 1.96E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS30520 f9be694ccc5efb1903e8a024dac08851 427 Gene3D G3DSA:1.20.1250.20 10 203 8.2E-25 T 28-03-2018 AL504_RS30520 f9be694ccc5efb1903e8a024dac08851 427 Pfam PF07690 Major Facilitator Superfamily 25 351 7.7E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS30520 f9be694ccc5efb1903e8a024dac08851 427 Gene3D G3DSA:1.20.1250.20 232 425 5.0E-23 T 28-03-2018 AL504_RS01835 f2602786cfd855c1234e8a5603a03536 1236 Pfam PF06761 Intracellular multiplication and human macrophage-killing 474 821 1.8E-90 T 28-03-2018 IPR009612 ImcF-related AL504_RS01835 f2602786cfd855c1234e8a5603a03536 1236 Gene3D G3DSA:3.40.50.300 83 402 1.8E-5 T 28-03-2018 AL504_RS01835 f2602786cfd855c1234e8a5603a03536 1236 Pfam PF14331 ImcF-related N-terminal domain 170 422 1.3E-80 T 28-03-2018 IPR025743 ImcF-related, N-terminal domain AL504_RS01835 f2602786cfd855c1234e8a5603a03536 1236 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 13 1187 9.9E-218 T 28-03-2018 IPR017731 Type VI secretion system, IcmF AL504_RS01835 f2602786cfd855c1234e8a5603a03536 1236 SUPERFAMILY SSF52540 101 294 1.17E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS01835 f2602786cfd855c1234e8a5603a03536 1236 Pfam PF06744 Type VI secretion protein IcmF C-terminal 958 1159 3.5E-52 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL504_RS09975 756a14c55c7d533dc4c6eaa48165d420 459 Pfam PF02646 RmuC family 136 423 2.3E-74 T 28-03-2018 IPR003798 DNA recombination RmuC AL504_RS09975 756a14c55c7d533dc4c6eaa48165d420 459 Gene3D G3DSA:1.20.120.20 24 173 8.7E-7 T 28-03-2018 AL504_RS09975 756a14c55c7d533dc4c6eaa48165d420 459 SUPERFAMILY SSF58113 30 148 1.83E-5 T 28-03-2018 AL504_RS09975 756a14c55c7d533dc4c6eaa48165d420 459 Gene3D G3DSA:1.20.1480.30 342 417 0.0068 T 28-03-2018 AL504_RS23580 d3abb542c73631aea476f401e932499e 372 Gene3D G3DSA:2.60.120.10 236 352 1.3E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23580 d3abb542c73631aea476f401e932499e 372 Pfam PF07883 Cupin domain 83 147 3.0E-7 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS23580 d3abb542c73631aea476f401e932499e 372 Gene3D G3DSA:2.60.120.10 87 151 9.2E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23580 d3abb542c73631aea476f401e932499e 372 SUPERFAMILY SSF51182 40 350 2.82E-47 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS23580 d3abb542c73631aea476f401e932499e 372 Pfam PF02311 AraC-like ligand binding domain 277 354 1.3E-4 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS23580 d3abb542c73631aea476f401e932499e 372 Gene3D G3DSA:3.30.559.10 1 86 0.001 T 28-03-2018 AL504_RS03060 94600c8efbaa95a6a553f0f238057f31 386 SUPERFAMILY SSF69304 249 365 5.62E-13 T 28-03-2018 AL504_RS03060 94600c8efbaa95a6a553f0f238057f31 386 SUPERFAMILY SSF69304 55 197 5.62E-13 T 28-03-2018 AL504_RS03060 94600c8efbaa95a6a553f0f238057f31 386 Gene3D G3DSA:2.120.10.30 7 130 1.2E-4 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS03060 94600c8efbaa95a6a553f0f238057f31 386 Gene3D G3DSA:2.130.10.10 134 369 1.5E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS13640 cae5fecaf99433287b1554034f8d4f24 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 11 107 6.9E-22 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AL504_RS21025 4cd3dcb0f5ba57e616ac2e0bccb43762 497 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 491 3.7E-71 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL504_RS21025 4cd3dcb0f5ba57e616ac2e0bccb43762 497 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 497 3.9E-127 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL504_RS21025 4cd3dcb0f5ba57e616ac2e0bccb43762 497 PIRSF PIRSF002457 3 497 1.1E-130 T 28-03-2018 IPR030676 Citrate carrier CitT-related AL504_RS02275 0b5349cda74fd2e1474ebe03f1ebaa0f 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS02275 0b5349cda74fd2e1474ebe03f1ebaa0f 260 SUPERFAMILY SSF52540 9 248 1.66E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS02275 0b5349cda74fd2e1474ebe03f1ebaa0f 260 Pfam PF00005 ABC transporter 25 178 1.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS02275 0b5349cda74fd2e1474ebe03f1ebaa0f 260 PIRSF PIRSF039085 6 254 1.6E-109 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS02275 0b5349cda74fd2e1474ebe03f1ebaa0f 260 Gene3D G3DSA:3.40.50.300 5 258 1.5E-71 T 28-03-2018 AL504_RS02275 0b5349cda74fd2e1474ebe03f1ebaa0f 260 SMART SM00382 34 226 2.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26925 21f7dc225a57781eb78d77a9e4c05261 333 Gene3D G3DSA:3.40.190.10 166 324 1.7E-30 T 28-03-2018 AL504_RS26925 21f7dc225a57781eb78d77a9e4c05261 333 SUPERFAMILY SSF53850 32 328 2.44E-79 T 28-03-2018 AL504_RS26925 21f7dc225a57781eb78d77a9e4c05261 333 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 312 1.5E-60 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AL504_RS26925 21f7dc225a57781eb78d77a9e4c05261 333 Gene3D G3DSA:3.40.190.10 27 165 3.9E-19 T 28-03-2018 AL504_RS22620 76aed454ea8a77b552645da84a498c9d 650 Gene3D G3DSA:2.130.10.120 309 526 0.0026 T 28-03-2018 AL504_RS22620 76aed454ea8a77b552645da84a498c9d 650 SUPERFAMILY SSF63829 523 607 7.85E-14 T 28-03-2018 AL504_RS22620 76aed454ea8a77b552645da84a498c9d 650 SUPERFAMILY SSF63829 462 481 7.85E-14 T 28-03-2018 AL504_RS22620 76aed454ea8a77b552645da84a498c9d 650 SUPERFAMILY SSF63829 318 406 7.85E-14 T 28-03-2018 AL504_RS22620 76aed454ea8a77b552645da84a498c9d 650 Gene3D G3DSA:2.130.10.10 527 639 2.8E-9 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 Gene3D G3DSA:3.30.300.30 328 437 1.2E-9 T 28-03-2018 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 14 435 4.6E-220 T 28-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 PIRSF PIRSF006444 3 437 6.2E-208 T 28-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 Gene3D G3DSA:3.40.50.980 16 99 0.35 T 28-03-2018 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 Pfam PF00501 AMP-binding enzyme 91 292 1.0E-17 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 Gene3D G3DSA:3.40.50.980 100 261 1.5E-22 T 28-03-2018 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 SUPERFAMILY SSF56801 20 432 3.66E-64 T 28-03-2018 AL504_RS11185 d1418b286b1c5b0e4c607b3a198775a5 438 Pfam PF14535 AMP-binding enzyme C-terminal domain 338 435 6.3E-24 T 28-03-2018 IPR028154 AMP-dependent ligase, C-terminal AL504_RS29535 870005f6a994f1cea3807473abda6572 357 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 93 281 1.4E-35 T 28-03-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AL504_RS29535 870005f6a994f1cea3807473abda6572 357 Pfam PF10503 Esterase PHB depolymerase 79 284 2.4E-62 T 28-03-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AL504_RS29535 870005f6a994f1cea3807473abda6572 357 Gene3D G3DSA:3.40.50.1820 15 352 1.8E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29535 870005f6a994f1cea3807473abda6572 357 SUPERFAMILY SSF53474 71 278 4.22E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS07390 bdf73a5f3210341f5fd3114e6829c7a5 285 SUPERFAMILY SSF53474 11 279 2.15E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS07390 bdf73a5f3210341f5fd3114e6829c7a5 285 Gene3D G3DSA:3.40.50.1820 8 282 3.4E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS07390 bdf73a5f3210341f5fd3114e6829c7a5 285 Pfam PF01738 Dienelactone hydrolase family 84 188 8.2E-6 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL504_RS30735 f29f0588960a745d34587eac55a24415 310 Pfam PF04773 FecR protein 110 196 3.9E-14 T 28-03-2018 IPR006860 FecR protein AL504_RS30735 f29f0588960a745d34587eac55a24415 310 Pfam PF16220 Domain of unknown function (DUF4880) 15 56 3.2E-11 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS30735 f29f0588960a745d34587eac55a24415 310 PIRSF PIRSF018266 5 309 5.2E-59 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 Gene3D G3DSA:1.10.10.10 1 85 8.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.7E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 Pfam PF03466 LysR substrate binding domain 90 291 3.0E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 SUPERFAMILY SSF46785 2 80 5.45E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 Gene3D G3DSA:3.40.190.10 181 258 1.3E-17 T 28-03-2018 AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 Gene3D G3DSA:3.40.190.10 87 180 9.2E-19 T 28-03-2018 AL504_RS26730 bacc61d306b9fec6ba358c6349149248 315 SUPERFAMILY SSF53850 92 294 1.21E-39 T 28-03-2018 AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 SUPERFAMILY SSF46785 8 87 4.08E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 Gene3D G3DSA:1.10.10.10 4 89 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 Gene3D G3DSA:3.40.190.10 194 274 3.8E-11 T 28-03-2018 AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 Gene3D G3DSA:3.40.190.10 91 193 1.6E-5 T 28-03-2018 AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 SUPERFAMILY SSF53850 99 288 1.12E-16 T 28-03-2018 AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 Pfam PF03466 LysR substrate binding domain 95 305 2.5E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00605 72508e4bda3cd4bae35d31e02de681ad 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.3E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 SMART SM01274 18 152 1.6E-74 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 SUPERFAMILY SSF51735 164 443 4.93E-85 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 SUPERFAMILY SSF53223 11 162 7.91E-49 T 28-03-2018 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 Gene3D G3DSA:3.40.718.10 448 720 1.7E-51 T 28-03-2018 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 Gene3D G3DSA:3.40.50.720 162 447 1.1E-85 T 28-03-2018 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 SUPERFAMILY SSF53659 430 753 5.76E-89 T 28-03-2018 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 Gene3D G3DSA:3.40.50.10380 5 161 8.6E-33 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 Pfam PF03949 Malic enzyme, NAD binding domain 166 361 8.6E-25 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 SMART SM00919 164 401 5.9E-141 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 750 3.4E-95 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 PIRSF PIRSF036684 1 758 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AL504_RS11730 1bd908754a0951ad8c178f02abbb6b19 765 Pfam PF00390 Malic enzyme, N-terminal domain 19 152 2.7E-26 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL504_RS20825 7a87200bb58045c42632d675280935b3 287 Pfam PF00753 Metallo-beta-lactamase superfamily 15 205 1.8E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS20825 7a87200bb58045c42632d675280935b3 287 SMART SM00849 14 205 6.9E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS20825 7a87200bb58045c42632d675280935b3 287 Gene3D G3DSA:3.60.15.10 1 287 1.7E-53 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS20825 7a87200bb58045c42632d675280935b3 287 SUPERFAMILY SSF56281 8 286 4.2E-48 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS17790 8de33f2307b9c4de3357f3ad572bf52c 191 Gene3D G3DSA:3.40.30.10 25 189 7.2E-8 T 28-03-2018 AL504_RS17790 8de33f2307b9c4de3357f3ad572bf52c 191 SUPERFAMILY SSF52833 47 185 7.47E-12 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 Gene3D G3DSA:2.140.10.10 275 384 6.2E-8 T 28-03-2018 AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 Gene3D G3DSA:2.140.10.10 184 274 1.8E-7 T 28-03-2018 AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 Gene3D G3DSA:2.140.10.10 27 183 1.2E-22 T 28-03-2018 AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 7 384 37.339 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 11 381 1.0E-124 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 SUPERFAMILY SSF50998 29 375 1.83E-67 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 SMART SM00564 322 353 0.26 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 SMART SM00564 146 177 0.0026 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 SMART SM00564 190 222 400.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 SMART SM00564 67 98 34.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 SMART SM00564 106 137 94.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL504_RS09125 bf68ef1c2f163c37647d6f171aaa945e 385 Pfam PF13360 PQQ-like domain 80 311 2.8E-48 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 SMART SM00567 E-Z type HEAT repeats 46 74 290.0 T 28-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 SMART SM00567 E-Z type HEAT repeats 225 255 800.0 T 28-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 SMART SM00567 E-Z type HEAT repeats 135 164 0.1 T 28-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 SMART SM00567 E-Z type HEAT repeats 187 216 670.0 T 28-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 Gene3D G3DSA:1.25.40.70 106 181 0.025 T 28-03-2018 AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 Pfam PF02653 Branched-chain amino acid transport system / permease component 250 527 4.5E-51 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 250 540 6.9E-129 T 28-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 SUPERFAMILY SSF48371 130 238 1.81E-9 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 AL504_RS25265 70bae7ed92fbdadae9723c215395f099 543 Gene3D G3DSA:1.10.3470.10 209 530 1.6E-48 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 SUPERFAMILY SSF81901 29 212 5.76E-42 T 28-03-2018 AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Gene3D G3DSA:2.60.40.1180 26 89 3.4E-17 T 28-03-2018 AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Gene3D G3DSA:2.60.40.1180 90 140 2.8E-14 T 28-03-2018 AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Gene3D G3DSA:2.60.40.1180 141 205 1.0E-12 T 28-03-2018 AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Pfam PF08238 Sel1 repeat 190 211 230.0 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Pfam PF08238 Sel1 repeat 117 150 0.0014 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Pfam PF08238 Sel1 repeat 158 186 0.0072 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Pfam PF08238 Sel1 repeat 79 112 1.3E-5 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 Pfam PF08238 Sel1 repeat 49 77 6.8E-6 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 SMART SM00671 151 186 0.011 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 SMART SM00671 116 150 0.56 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 SMART SM00671 78 113 3.7E-6 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS20515 ad80bb668e2b0068e047b5a7476a042d 242 SMART SM00671 42 77 3.5E-6 T 28-03-2018 IPR006597 Sel1-like repeat AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 1.6E-23 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 380 8.1E-41 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 SUPERFAMILY SSF47203 235 381 1.06E-42 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 121 1.6E-28 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 Gene3D G3DSA:1.20.140.10 224 381 3.9E-51 T 28-03-2018 AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 SUPERFAMILY SSF56645 7 245 5.5E-75 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 Gene3D G3DSA:1.10.540.10 9 123 1.3E-29 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS18275 2f24a4e8b47e0866966803ce33397529 381 Gene3D G3DSA:2.40.110.10 124 223 1.9E-36 T 28-03-2018 AL504_RS06155 af0abce5992c295fb9245bcaacf37248 186 SUPERFAMILY SSF111384 43 184 4.97E-37 T 28-03-2018 IPR024930 Skp domain AL504_RS06155 af0abce5992c295fb9245bcaacf37248 186 SMART SM00935 33 185 1.7E-58 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL504_RS06155 af0abce5992c295fb9245bcaacf37248 186 PIRSF PIRSF002094 22 186 3.1E-51 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL504_RS06155 af0abce5992c295fb9245bcaacf37248 186 Pfam PF03938 Outer membrane protein (OmpH-like) 31 184 1.5E-36 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL504_RS06155 af0abce5992c295fb9245bcaacf37248 186 Gene3D G3DSA:3.30.910.20 33 185 1.9E-24 T 28-03-2018 AL504_RS05625 b94bfc45b022c83cd5ae651f583398aa 268 SMART SM00346 19 110 1.1E-16 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS05625 b94bfc45b022c83cd5ae651f583398aa 268 SUPERFAMILY SSF55781 85 263 6.47E-41 T 28-03-2018 IPR029016 GAF domain-like AL504_RS05625 b94bfc45b022c83cd5ae651f583398aa 268 Pfam PF09339 IclR helix-turn-helix domain 21 73 1.0E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS05625 b94bfc45b022c83cd5ae651f583398aa 268 SUPERFAMILY SSF46785 20 93 3.84E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05625 b94bfc45b022c83cd5ae651f583398aa 268 Pfam PF01614 Bacterial transcriptional regulator 142 259 1.9E-19 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS05625 b94bfc45b022c83cd5ae651f583398aa 268 Gene3D G3DSA:3.30.450.40 86 267 2.7E-42 T 28-03-2018 IPR029016 GAF domain-like AL504_RS05625 b94bfc45b022c83cd5ae651f583398aa 268 Gene3D G3DSA:1.10.10.10 1 81 2.2E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20715 34a442fcd03f03e3d34d77a7b98773a3 224 PIRSF PIRSF006806 8 202 2.3E-24 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL504_RS20715 34a442fcd03f03e3d34d77a7b98773a3 224 SUPERFAMILY SSF100950 12 204 5.58E-41 T 28-03-2018 AL504_RS20715 34a442fcd03f03e3d34d77a7b98773a3 224 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 13 199 3.0E-38 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL504_RS20715 34a442fcd03f03e3d34d77a7b98773a3 224 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 13 199 8.6E-26 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL504_RS20715 34a442fcd03f03e3d34d77a7b98773a3 224 Gene3D G3DSA:3.40.50.10420 1 206 2.1E-50 T 28-03-2018 AL504_RS09050 7d4736dfa58256dd7d6198a1e99e32c5 380 Gene3D G3DSA:3.40.50.2000 172 349 5.3E-41 T 28-03-2018 AL504_RS09050 7d4736dfa58256dd7d6198a1e99e32c5 380 Pfam PF13439 Glycosyltransferase Family 4 13 155 3.2E-13 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS09050 7d4736dfa58256dd7d6198a1e99e32c5 380 Pfam PF00534 Glycosyl transferases group 1 177 343 2.7E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS09050 7d4736dfa58256dd7d6198a1e99e32c5 380 Gene3D G3DSA:3.40.50.2000 1 171 2.5E-13 T 28-03-2018 AL504_RS09050 7d4736dfa58256dd7d6198a1e99e32c5 380 SUPERFAMILY SSF53756 4 364 3.45E-63 T 28-03-2018 AL504_RS27795 0238331d96a4c93c288f25e431955e91 830 Pfam PF07715 TonB-dependent Receptor Plug Domain 161 261 5.9E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS27795 0238331d96a4c93c288f25e431955e91 830 Gene3D G3DSA:2.170.130.10 117 268 6.6E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS27795 0238331d96a4c93c288f25e431955e91 830 Gene3D G3DSA:2.40.170.20 269 830 5.4E-81 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS27795 0238331d96a4c93c288f25e431955e91 830 SMART SM00965 65 115 2.5E-13 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS27795 0238331d96a4c93c288f25e431955e91 830 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 162 827 1.0E-96 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS27795 0238331d96a4c93c288f25e431955e91 830 SUPERFAMILY SSF56935 120 829 1.19E-116 T 28-03-2018 AL504_RS27795 0238331d96a4c93c288f25e431955e91 830 Pfam PF00593 TonB dependent receptor 361 827 4.6E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS18365 bea32bf6514d580ea93f7f1af181b377 234 Pfam PF04335 VirB8 protein 23 225 1.3E-67 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AL504_RS18365 bea32bf6514d580ea93f7f1af181b377 234 SUPERFAMILY SSF54427 93 227 1.1E-26 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS25730 0b123f12c15a796686891c011eca6390 386 Gene3D G3DSA:3.90.1150.10 265 386 9.3E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS25730 0b123f12c15a796686891c011eca6390 386 Gene3D G3DSA:3.40.640.10 46 264 1.9E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS25730 0b123f12c15a796686891c011eca6390 386 SUPERFAMILY SSF53383 13 384 2.42E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS25730 0b123f12c15a796686891c011eca6390 386 Pfam PF00155 Aminotransferase class I and II 32 377 8.2E-56 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 ProSitePatterns PS01128 Shikimate kinase signature. 97 122 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 Hamap MF_00109 Shikimate kinase [aroK]. 41 207 28.999 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 Gene3D G3DSA:3.40.50.300 43 213 2.2E-30 T 28-03-2018 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 Pfam PF01202 Shikimate kinase 50 206 6.0E-49 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 SUPERFAMILY SSF52540 44 203 6.48E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 PRINTS PR01100 Shikimate kinase family signature 44 59 5.9E-25 T 28-03-2018 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 PRINTS PR01100 Shikimate kinase family signature 114 123 5.9E-25 T 28-03-2018 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 PRINTS PR01100 Shikimate kinase family signature 68 81 5.9E-25 T 28-03-2018 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 PRINTS PR01100 Shikimate kinase family signature 96 104 5.9E-25 T 28-03-2018 AL504_RS20105 a5864b57f9edb17460ce5535a3af9c4a 213 PRINTS PR01100 Shikimate kinase family signature 135 152 5.9E-25 T 28-03-2018 AL504_RS05010 b426bc7835dc6af447de07239c471d7c 268 Gene3D G3DSA:3.40.1640.10 2 167 6.6E-70 T 28-03-2018 AL504_RS05010 b426bc7835dc6af447de07239c471d7c 268 Gene3D G3DSA:3.40.1640.10 205 268 5.1E-9 T 28-03-2018 AL504_RS05010 b426bc7835dc6af447de07239c471d7c 268 Hamap MF_01830 UPF0317 protein . 13 267 55.602 T 28-03-2018 IPR016938 Uncharacterised protein family UPF0317 AL504_RS05010 b426bc7835dc6af447de07239c471d7c 268 SUPERFAMILY SSF160920 14 260 7.45E-115 T 28-03-2018 AL504_RS05010 b426bc7835dc6af447de07239c471d7c 268 PIRSF PIRSF029755 2 268 1.6E-125 T 28-03-2018 IPR016938 Uncharacterised protein family UPF0317 AL504_RS05010 b426bc7835dc6af447de07239c471d7c 268 Pfam PF07286 Protein of unknown function (DUF1445) 117 259 8.5E-68 T 28-03-2018 IPR009906 D-glutamate cyclase AL504_RS06065 7065aaad54e61d93a8170e8cb8ed0c70 396 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 380 1.0E-39 T 28-03-2018 IPR000160 GGDEF domain AL504_RS06065 7065aaad54e61d93a8170e8cb8ed0c70 396 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 378 6.3E-36 T 28-03-2018 IPR000160 GGDEF domain AL504_RS06065 7065aaad54e61d93a8170e8cb8ed0c70 396 Gene3D G3DSA:3.30.70.270 216 382 3.5E-48 T 28-03-2018 AL504_RS06065 7065aaad54e61d93a8170e8cb8ed0c70 396 SUPERFAMILY SSF55073 227 380 2.51E-43 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS06065 7065aaad54e61d93a8170e8cb8ed0c70 396 SMART SM00267 211 382 1.9E-41 T 28-03-2018 IPR000160 GGDEF domain AL504_RS30570 fe9bfb730b9d03afef44caca4996ddd9 347 Pfam PF00296 Luciferase-like monooxygenase 36 252 2.8E-38 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS30570 fe9bfb730b9d03afef44caca4996ddd9 347 Gene3D G3DSA:3.20.20.30 12 337 2.4E-59 T 28-03-2018 AL504_RS30570 fe9bfb730b9d03afef44caca4996ddd9 347 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 24 334 4.7E-114 T 28-03-2018 IPR020020 Luciferase-type oxidoreductase AL504_RS30570 fe9bfb730b9d03afef44caca4996ddd9 347 SUPERFAMILY SSF51679 31 334 8.98E-60 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS25270 b50fe2942fd33a80cdc4ad036ba3053e 417 Pfam PF13433 Periplasmic binding protein domain 32 408 1.7E-171 T 28-03-2018 AL504_RS25270 b50fe2942fd33a80cdc4ad036ba3053e 417 Gene3D G3DSA:3.40.50.2300 27 162 1.7E-22 T 28-03-2018 AL504_RS25270 b50fe2942fd33a80cdc4ad036ba3053e 417 Gene3D G3DSA:3.40.50.2300 163 355 2.1E-26 T 28-03-2018 AL504_RS25270 b50fe2942fd33a80cdc4ad036ba3053e 417 SUPERFAMILY SSF53822 31 410 1.15E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS25270 b50fe2942fd33a80cdc4ad036ba3053e 417 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 32 405 1.7E-178 T 28-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 SUPERFAMILY SSF53187 7 195 3.43E-50 T 28-03-2018 AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 SUPERFAMILY SSF53187 320 407 3.43E-50 T 28-03-2018 AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 89 98 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 Pfam PF01546 Peptidase family M20/M25/M40 90 404 4.6E-26 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 SUPERFAMILY SSF55031 196 311 3.14E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 Gene3D G3DSA:3.40.630.10 288 410 2.4E-6 T 28-03-2018 AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 Pfam PF07687 Peptidase dimerisation domain 192 302 1.4E-20 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS11715 e06a75587c24d124c45b22815a6a57cf 410 Gene3D G3DSA:3.40.630.10 2 287 8.3E-56 T 28-03-2018 AL504_RS01225 f2ea3671bab6c7859c14f2565b36a23e 144 SUPERFAMILY SSF54427 12 137 1.49E-11 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS01225 f2ea3671bab6c7859c14f2565b36a23e 144 Gene3D G3DSA:3.10.450.50 3 138 8.5E-14 T 28-03-2018 AL504_RS16205 ac91687703accf31badda66337bb50a7 311 SUPERFAMILY SSF53850 96 305 1.66E-35 T 28-03-2018 AL504_RS16205 ac91687703accf31badda66337bb50a7 311 Pfam PF03466 LysR substrate binding domain 93 300 7.1E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS16205 ac91687703accf31badda66337bb50a7 311 SUPERFAMILY SSF46785 5 110 6.53E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16205 ac91687703accf31badda66337bb50a7 311 Gene3D G3DSA:3.40.190.10 184 272 8.2E-16 T 28-03-2018 AL504_RS16205 ac91687703accf31badda66337bb50a7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16205 ac91687703accf31badda66337bb50a7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16205 ac91687703accf31badda66337bb50a7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16205 ac91687703accf31badda66337bb50a7 311 Gene3D G3DSA:1.10.10.10 2 89 1.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS16205 ac91687703accf31badda66337bb50a7 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 8.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS16205 ac91687703accf31badda66337bb50a7 311 Gene3D G3DSA:3.40.190.10 94 183 2.1E-18 T 28-03-2018 AL504_RS04790 92c4fd8cbd1503352ce6c5e6fe82c048 301 Pfam PF05726 Pirin C-terminal cupin domain 184 283 3.7E-26 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AL504_RS04790 92c4fd8cbd1503352ce6c5e6fe82c048 301 PIRSF PIRSF006232 9 291 1.1E-88 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL504_RS04790 92c4fd8cbd1503352ce6c5e6fe82c048 301 SUPERFAMILY SSF51182 13 286 2.71E-82 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS04790 92c4fd8cbd1503352ce6c5e6fe82c048 301 Pfam PF02678 Pirin 26 131 2.4E-35 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL504_RS04790 92c4fd8cbd1503352ce6c5e6fe82c048 301 Gene3D G3DSA:2.60.120.10 10 255 4.3E-64 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS20925 7b1407b3ed7ae6a1ce03786d07a28f1e 304 Gene3D G3DSA:3.40.190.10 92 177 2.2E-17 T 28-03-2018 AL504_RS20925 7b1407b3ed7ae6a1ce03786d07a28f1e 304 Gene3D G3DSA:1.10.10.10 5 84 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20925 7b1407b3ed7ae6a1ce03786d07a28f1e 304 SUPERFAMILY SSF46785 3 81 1.09E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20925 7b1407b3ed7ae6a1ce03786d07a28f1e 304 Pfam PF03466 LysR substrate binding domain 93 289 1.8E-29 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS20925 7b1407b3ed7ae6a1ce03786d07a28f1e 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 7.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS20925 7b1407b3ed7ae6a1ce03786d07a28f1e 304 SUPERFAMILY SSF53850 93 292 5.79E-35 T 28-03-2018 AL504_RS20925 7b1407b3ed7ae6a1ce03786d07a28f1e 304 Gene3D G3DSA:3.40.190.10 178 258 2.2E-17 T 28-03-2018 AL504_RS18590 b11fb7184db18a40fe4c9716b7126ce8 142 Pfam PF05932 Tir chaperone protein (CesT) family 37 121 1.6E-12 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL504_RS18590 b11fb7184db18a40fe4c9716b7126ce8 142 SUPERFAMILY SSF69635 1 131 9.81E-14 T 28-03-2018 AL504_RS18590 b11fb7184db18a40fe4c9716b7126ce8 142 Gene3D G3DSA:3.30.1460.10 1 136 6.3E-27 T 28-03-2018 AL504_RS03950 1dcfbba24d21ed807f222b77dfc35c18 283 Pfam PF13847 Methyltransferase domain 82 205 7.9E-9 T 28-03-2018 IPR025714 Methyltransferase domain AL504_RS03950 1dcfbba24d21ed807f222b77dfc35c18 283 SUPERFAMILY SSF53335 63 176 1.03E-26 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS03950 1dcfbba24d21ed807f222b77dfc35c18 283 Gene3D G3DSA:3.40.50.150 9 251 4.2E-18 T 28-03-2018 AL504_RS27600 8f022997b47e495f17151da56cd8182a 235 Gene3D G3DSA:3.40.50.2300 1 116 6.7E-21 T 28-03-2018 AL504_RS27600 8f022997b47e495f17151da56cd8182a 235 SMART SM00448 1 112 5.0E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS27600 8f022997b47e495f17151da56cd8182a 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 3.6E-6 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS27600 8f022997b47e495f17151da56cd8182a 235 SUPERFAMILY SSF52172 1 152 3.56E-24 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS27600 8f022997b47e495f17151da56cd8182a 235 SUPERFAMILY SSF46894 128 222 1.47E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS27600 8f022997b47e495f17151da56cd8182a 235 Pfam PF00072 Response regulator receiver domain 3 111 1.5E-11 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS27600 8f022997b47e495f17151da56cd8182a 235 Gene3D G3DSA:1.10.10.10 117 227 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05595 e5c0f4930bf48d0c3f9df9df02fd9e30 318 Gene3D G3DSA:2.40.50.100 121 159 0.11 T 28-03-2018 AL504_RS05595 e5c0f4930bf48d0c3f9df9df02fd9e30 318 Gene3D G3DSA:2.40.50.100 51 120 3.1E-15 T 28-03-2018 AL504_RS05595 e5c0f4930bf48d0c3f9df9df02fd9e30 318 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 234 1.4E-30 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS05595 e5c0f4930bf48d0c3f9df9df02fd9e30 318 SUPERFAMILY SSF111369 44 219 4.97E-22 T 28-03-2018 AL504_RS05595 e5c0f4930bf48d0c3f9df9df02fd9e30 318 Pfam PF13437 HlyD family secretion protein 160 241 6.7E-9 T 28-03-2018 AL504_RS05595 e5c0f4930bf48d0c3f9df9df02fd9e30 318 Gene3D G3DSA:2.40.50.100 160 312 0.03 T 28-03-2018 AL504_RS05595 e5c0f4930bf48d0c3f9df9df02fd9e30 318 Pfam PF13533 Biotin-lipoyl like 51 98 2.3E-18 T 28-03-2018 AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 3.0E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 3.5E-17 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 3.5E-17 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 3.7E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 SUPERFAMILY SSF54523 40 141 7.85E-37 T 28-03-2018 AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 Pfam PF08334 Type II secretion system (T2SS), protein G 36 140 5.6E-42 T 28-03-2018 IPR013545 Type II secretion system protein G AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 12 141 1.2E-53 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AL504_RS06805 2a5fbc13a68dd723c885bae338ebc01e 142 Gene3D G3DSA:3.30.700.10 27 140 1.1E-29 T 28-03-2018 AL504_RS30045 b2d61d88cc9c77fa009975ef5f01599a 215 Gene3D G3DSA:3.40.30.10 1 96 3.1E-29 T 28-03-2018 AL504_RS30045 b2d61d88cc9c77fa009975ef5f01599a 215 SUPERFAMILY SSF47616 72 201 1.17E-31 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS30045 b2d61d88cc9c77fa009975ef5f01599a 215 Gene3D G3DSA:1.20.1050.10 97 205 1.4E-28 T 28-03-2018 AL504_RS30045 b2d61d88cc9c77fa009975ef5f01599a 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 78 5.9E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS30045 b2d61d88cc9c77fa009975ef5f01599a 215 SUPERFAMILY SSF52833 1 84 2.24E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS30045 b2d61d88cc9c77fa009975ef5f01599a 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 196 3.8E-12 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS22855 a014a533c5257f68a7b83b93e652b431 792 Pfam PF07715 TonB-dependent Receptor Plug Domain 143 244 1.8E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS22855 a014a533c5257f68a7b83b93e652b431 792 Pfam PF00593 TonB dependent receptor 332 791 3.6E-58 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS22855 a014a533c5257f68a7b83b93e652b431 792 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 143 791 2.5E-106 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS22855 a014a533c5257f68a7b83b93e652b431 792 Gene3D G3DSA:2.170.130.10 102 257 2.8E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS22855 a014a533c5257f68a7b83b93e652b431 792 SUPERFAMILY SSF56935 132 792 3.66E-137 T 28-03-2018 AL504_RS22855 a014a533c5257f68a7b83b93e652b431 792 Gene3D G3DSA:2.40.170.20 258 792 2.6E-86 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS22855 a014a533c5257f68a7b83b93e652b431 792 SMART SM00965 49 100 2.6E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS11945 de79e81667fda491eff0e9fdda8a28a6 149 Gene3D G3DSA:3.10.129.10 14 144 1.6E-30 T 28-03-2018 AL504_RS11945 de79e81667fda491eff0e9fdda8a28a6 149 Pfam PF13279 Thioesterase-like superfamily 24 141 8.6E-17 T 28-03-2018 AL504_RS11945 de79e81667fda491eff0e9fdda8a28a6 149 SUPERFAMILY SSF54637 16 142 5.95E-30 T 28-03-2018 IPR029069 HotDog domain AL504_RS00925 027da7312f1bed1d260170d4374d6527 670 SUPERFAMILY SSF81901 496 626 5.62E-6 T 28-03-2018 AL504_RS00925 027da7312f1bed1d260170d4374d6527 670 Gene3D G3DSA:1.25.40.120 16 483 2.3E-8 T 28-03-2018 AL504_RS00925 027da7312f1bed1d260170d4374d6527 670 Gene3D G3DSA:2.60.40.1180 563 644 0.14 T 28-03-2018 AL504_RS00925 027da7312f1bed1d260170d4374d6527 670 Pfam PF13226 Domain of unknown function (DUF4034) 8 280 2.0E-76 T 28-03-2018 IPR025115 Domain of unknown function DUF4034 AL504_RS30040 0024aabe820edb1364e873dc147304d1 157 SUPERFAMILY SSF82784 4 151 1.57E-44 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS30040 0024aabe820edb1364e873dc147304d1 157 Gene3D G3DSA:3.30.300.20 1 157 8.1E-43 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS30040 0024aabe820edb1364e873dc147304d1 157 Pfam PF02566 OsmC-like protein 52 150 1.6E-11 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS30600 ab0e5d93f3ac51e28733885b344c383f 217 SUPERFAMILY SSF161098 14 200 3.01E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS30600 ab0e5d93f3ac51e28733885b344c383f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 5.0E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS30600 ab0e5d93f3ac51e28733885b344c383f 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.2E-27 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS30600 ab0e5d93f3ac51e28733885b344c383f 217 TIGRFAM TIGR03004 ectoine_ehuC: ectoine/hydroxyectoine ABC transporter, permease protein EhuC 10 215 1.3E-80 T 28-03-2018 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC AL504_RS30600 ab0e5d93f3ac51e28733885b344c383f 217 Gene3D G3DSA:1.10.3720.10 3 217 1.2E-43 T 28-03-2018 AL504_RS23955 69027a76cc00e31a7c15f356c075a5f0 174 Gene3D G3DSA:1.10.10.10 104 173 6.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23955 69027a76cc00e31a7c15f356c075a5f0 174 Gene3D G3DSA:1.10.1740.10 1 77 4.5E-16 T 28-03-2018 AL504_RS23955 69027a76cc00e31a7c15f356c075a5f0 174 Pfam PF04542 Sigma-70 region 2 7 74 1.2E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23955 69027a76cc00e31a7c15f356c075a5f0 174 SUPERFAMILY SSF88659 99 158 1.74E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23955 69027a76cc00e31a7c15f356c075a5f0 174 SUPERFAMILY SSF88946 6 87 1.88E-16 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23955 69027a76cc00e31a7c15f356c075a5f0 174 Pfam PF08281 Sigma-70, region 4 103 154 3.5E-18 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS23955 69027a76cc00e31a7c15f356c075a5f0 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 156 4.7E-24 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS00740 ca214a2f95c527d5b6ff303e3096d279 313 SUPERFAMILY SSF51735 3 259 1.14E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS00740 ca214a2f95c527d5b6ff303e3096d279 313 Gene3D G3DSA:3.40.50.720 2 163 1.9E-9 T 28-03-2018 AL504_RS00740 ca214a2f95c527d5b6ff303e3096d279 313 Pfam PF05368 NmrA-like family 7 240 4.7E-18 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AL504_RS00740 ca214a2f95c527d5b6ff303e3096d279 313 Gene3D G3DSA:3.90.25.10 164 288 1.3E-8 T 28-03-2018 AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 2.4E-120 T 28-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 SMART SM00382 27 214 1.2E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 SUPERFAMILY SSF52540 3 243 3.46E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 Gene3D G3DSA:3.40.50.300 1 279 8.8E-77 T 28-03-2018 AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 SUPERFAMILY SSF50331 240 349 2.15E-5 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 Pfam PF00005 ABC transporter 18 164 6.0E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS11295 4555f5c29ac21a901e079f89f8e43867 354 Pfam PF12857 TOBE-like domain 288 345 1.0E-14 T 28-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AL504_RS07065 d4de00af40b8a58b562b039dab400a64 354 Pfam PF13387 Domain of unknown function (DUF4105) 140 290 1.0E-40 T 28-03-2018 IPR025178 Domain of unknown function DUF4105 AL504_RS04285 d224dd68edd08aba635b3f349fd29555 393 Gene3D G3DSA:1.20.950.20 156 278 2.6E-4 T 28-03-2018 AL504_RS04285 d224dd68edd08aba635b3f349fd29555 393 Pfam PF03929 PepSY-associated TM region 16 371 9.3E-53 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 Gene3D G3DSA:3.40.1770.10 196 555 4.2E-164 T 28-03-2018 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 Gene3D G3DSA:3.40.1770.10 10 152 1.9E-29 T 28-03-2018 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 Pfam PF01175 Urocanase Rossmann-like domain 141 349 2.2E-86 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 SUPERFAMILY SSF111326 7 555 4.19E-262 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 Hamap MF_00577 Urocanate hydratase [hutU]. 2 556 50.841 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 Pfam PF17392 Urocanase C-terminal domain 352 546 5.1E-93 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 Pfam PF17391 Urocanase N-terminal domain 12 138 1.4E-62 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17500 be3e29adb132a1fb986e37dad23bcfb1 559 PIRSF PIRSF001423 2 559 1.8E-296 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 SUPERFAMILY SSF56719 42 516 3.4E-147 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 15 773 33.148 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 SMART SM00434 22 494 8.0E-214 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Gene3D G3DSA:3.90.199.10 45 298 8.3E-110 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Gene3D G3DSA:2.120.10.90 524 743 9.9E-46 T 28-03-2018 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 SUPERFAMILY SSF101904 531 757 3.53E-46 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Gene3D G3DSA:1.10.268.10 377 516 1.4E-40 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 22 757 2.4E-228 T 28-03-2018 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 43 500 2.4E-128 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 676 714 0.0064 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 628 664 4.0 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS09300 b8fe6d46a721e943615778f5cd10368b 773 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 574 616 0.37 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 Pfam PF12833 Helix-turn-helix domain 194 270 4.2E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 Gene3D G3DSA:1.10.10.60 228 277 7.6E-9 T 28-03-2018 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 SMART SM00342 188 270 9.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 Gene3D G3DSA:1.10.10.60 180 227 3.5E-11 T 28-03-2018 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 Gene3D G3DSA:2.60.120.10 3 179 2.2E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 9.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 9.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 Pfam PF02311 AraC-like ligand binding domain 47 156 3.4E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 SUPERFAMILY SSF51182 46 197 3.2E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS01320 e1c35af678ffc2799f0e8979c2401f44 277 SUPERFAMILY SSF46689 227 272 1.15E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS20915 1b7f5626516af110b104e472245179ad 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 8.0E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS20915 1b7f5626516af110b104e472245179ad 290 Gene3D G3DSA:1.10.3470.10 1 277 2.6E-43 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS05550 bc891d811dda8af652f483987228c438 283 Pfam PF02517 CAAX protease self-immunity 176 268 3.7E-23 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AL504_RS11530 a00bdd771f11e41a59ca7025ccd70f47 54 PIRSF PIRSF036466 1 54 2.0E-21 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AL504_RS11530 a00bdd771f11e41a59ca7025ccd70f47 54 Pfam PF07043 Protein of unknown function (DUF1328) 6 43 3.2E-15 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AL504_RS11530 a00bdd771f11e41a59ca7025ccd70f47 54 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 49 20.401 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AL504_RS04775 38d92869c5e942ba983dcdbbd4593e5f 325 Gene3D G3DSA:3.40.190.10 125 235 3.0E-9 T 28-03-2018 AL504_RS04775 38d92869c5e942ba983dcdbbd4593e5f 325 PIRSF PIRSF017082 1 325 3.5E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04775 38d92869c5e942ba983dcdbbd4593e5f 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 1.5E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS04775 38d92869c5e942ba983dcdbbd4593e5f 325 SUPERFAMILY SSF53850 121 287 2.85E-10 T 28-03-2018 AL504_RS04775 38d92869c5e942ba983dcdbbd4593e5f 325 Gene3D G3DSA:3.20.20.70 13 102 5.6E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS06960 af7761999b2460283e951837d7307745 433 Gene3D G3DSA:1.20.1250.20 12 223 1.4E-34 T 28-03-2018 AL504_RS06960 af7761999b2460283e951837d7307745 433 SUPERFAMILY SSF103473 11 425 4.19E-81 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS06960 af7761999b2460283e951837d7307745 433 Gene3D G3DSA:1.20.1250.20 235 433 2.7E-23 T 28-03-2018 AL504_RS06960 af7761999b2460283e951837d7307745 433 Pfam PF07690 Major Facilitator Superfamily 28 389 4.4E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 Gene3D G3DSA:1.10.287.950 186 316 2.9E-12 T 28-03-2018 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 481 2.6E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 Pfam PF00672 HAMP domain 215 261 8.4E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 SMART SM00304 213 265 3.8E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 SUPERFAMILY SSF47170 27 178 1.29E-18 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 Gene3D G3DSA:1.10.287.950 317 517 5.5E-46 T 28-03-2018 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 Pfam PF02203 Tar ligand binding domain homologue 1 153 1.2E-19 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 6.5E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 6.5E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 6.5E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 6.5E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 6.5E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 6.5E-63 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 SMART SM00283 266 513 4.9E-86 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 SUPERFAMILY SSF58104 233 518 1.44E-70 T 28-03-2018 AL504_RS26435 c3d830b9b403c466477ca81d84bcc86d 539 Gene3D G3DSA:1.20.120.30 24 185 1.7E-22 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS17110 850e5f2f7a5ca7f7dcf45c83426386c1 124 SUPERFAMILY SSF110069 5 124 5.76E-49 T 28-03-2018 IPR007474 ApaG domain AL504_RS17110 850e5f2f7a5ca7f7dcf45c83426386c1 124 Pfam PF04379 ApaG domain 16 101 3.9E-37 T 28-03-2018 IPR007474 ApaG domain AL504_RS17110 850e5f2f7a5ca7f7dcf45c83426386c1 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 32.644 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG AL504_RS17110 850e5f2f7a5ca7f7dcf45c83426386c1 124 Gene3D G3DSA:2.60.40.1470 3 124 1.2E-45 T 28-03-2018 IPR007474 ApaG domain AL504_RS18810 0f79baaff13ac4aa8b289041d4d83377 233 Gene3D G3DSA:2.160.20.80 1 183 3.0E-4 T 28-03-2018 AL504_RS02055 1da375c80677ab6c95fbf7d49c9e2efc 260 SUPERFAMILY SSF56529 3 259 1.53E-73 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS02055 1da375c80677ab6c95fbf7d49c9e2efc 260 Gene3D G3DSA:3.90.850.10 1 260 8.7E-42 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS02055 1da375c80677ab6c95fbf7d49c9e2efc 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 76 255 5.6E-6 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS02055 1da375c80677ab6c95fbf7d49c9e2efc 260 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 259 8.7E-116 T 28-03-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 AL504_RS30505 8121e0d64aeb89f60976c2cd9052d0e3 245 SUPERFAMILY SSF52540 7 240 2.33E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30505 8121e0d64aeb89f60976c2cd9052d0e3 245 PIRSF PIRSF039137 4 242 1.4E-109 T 28-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AL504_RS30505 8121e0d64aeb89f60976c2cd9052d0e3 245 SMART SM00382 33 235 8.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30505 8121e0d64aeb89f60976c2cd9052d0e3 245 Pfam PF00005 ABC transporter 25 169 8.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS30505 8121e0d64aeb89f60976c2cd9052d0e3 245 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS30505 8121e0d64aeb89f60976c2cd9052d0e3 245 Gene3D G3DSA:3.40.50.300 3 242 1.6E-57 T 28-03-2018 AL504_RS05565 0673a6b585070a235bd5238408328c4c 138 Gene3D G3DSA:3.30.160.20 1 138 8.8E-40 T 28-03-2018 AL504_RS05565 0673a6b585070a235bd5238408328c4c 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL504_RS05565 0673a6b585070a235bd5238408328c4c 138 SUPERFAMILY SSF75620 7 115 1.73E-13 T 28-03-2018 AL504_RS05565 0673a6b585070a235bd5238408328c4c 138 Pfam PF00472 RF-1 domain 8 132 5.7E-24 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL504_RS10320 cb28d4194e059965945375decbbda5d3 340 Pfam PF00589 Phage integrase family 140 303 4.6E-16 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS10320 cb28d4194e059965945375decbbda5d3 340 Gene3D G3DSA:1.10.443.10 136 320 1.9E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL504_RS10320 cb28d4194e059965945375decbbda5d3 340 Gene3D G3DSA:1.10.150.130 10 125 1.5E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL504_RS10320 cb28d4194e059965945375decbbda5d3 340 SUPERFAMILY SSF56349 15 309 5.0E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 SUPERFAMILY SSF51735 5 238 6.72E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 4.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 4.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 4.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 Gene3D G3DSA:3.40.50.720 1 241 1.1E-61 T 28-03-2018 AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 235 6.6E-43 T 28-03-2018 AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS13940 5f4f4593f9f19cc67e7f0ced1f1842a3 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 173 0.0078 T 28-03-2018 AL504_RS28625 68cc9ef9ff96843c36973c101f62336e 443 SUPERFAMILY SSF52540 151 174 9.44E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28625 68cc9ef9ff96843c36973c101f62336e 443 SUPERFAMILY SSF52540 204 415 9.44E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28625 68cc9ef9ff96843c36973c101f62336e 443 Gene3D G3DSA:3.40.50.300 146 418 1.6E-33 T 28-03-2018 AL504_RS28625 68cc9ef9ff96843c36973c101f62336e 443 SUPERFAMILY SSF52172 26 137 4.54E-8 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS28625 68cc9ef9ff96843c36973c101f62336e 443 Gene3D G3DSA:3.40.50.2300 13 140 1.6E-8 T 28-03-2018 AL504_RS03805 44accbe625ecc788b0c029b8fbf54f7e 176 SUPERFAMILY SSF46785 3 145 4.55E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03805 44accbe625ecc788b0c029b8fbf54f7e 176 Gene3D G3DSA:1.10.10.10 1 153 1.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03805 44accbe625ecc788b0c029b8fbf54f7e 176 PIRSF PIRSF006707 1 176 2.4E-56 T 28-03-2018 IPR026282 DNA-binding protein, MJ1563 type AL504_RS03805 44accbe625ecc788b0c029b8fbf54f7e 176 Pfam PF12802 MarR family 26 80 4.2E-9 T 28-03-2018 AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 SUPERFAMILY SSF46785 6 142 1.46E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 Gene3D G3DSA:1.10.10.10 3 145 4.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 9 132 3.0E-48 T 28-03-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 Pfam PF01047 MarR family 35 90 6.7E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 SMART SM00347 27 127 4.2E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 6.5E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 6.5E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS30275 4c1d446cd43fb728fdffd59f8c216f7e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 6.5E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 467 31.278 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00145 Argininosuccinate lyase family signature 105 127 3.2E-38 T 28-03-2018 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 3.2E-38 T 28-03-2018 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00145 Argininosuccinate lyase family signature 197 213 3.2E-38 T 28-03-2018 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00145 Argininosuccinate lyase family signature 235 259 3.2E-38 T 28-03-2018 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00145 Argininosuccinate lyase family signature 146 166 3.2E-38 T 28-03-2018 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 Pfam PF00206 Lyase 53 304 2.5E-43 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 TIGRFAM TIGR00838 argH: argininosuccinate lyase 39 467 3.4E-114 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 1.9E-21 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00149 Fumarate lyase superfamily signature 235 262 1.9E-21 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00149 Fumarate lyase superfamily signature 106 124 1.9E-21 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 PRINTS PR00149 Fumarate lyase superfamily signature 151 169 1.9E-21 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 Pfam PF14698 Argininosuccinate lyase C-terminal 368 445 3.1E-17 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 SUPERFAMILY SSF48557 33 468 4.71E-103 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 Gene3D G3DSA:1.20.200.10 111 379 7.6E-71 T 28-03-2018 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 Gene3D G3DSA:1.10.40.30 380 446 7.2E-17 T 28-03-2018 AL504_RS01380 fe6690fd0ca7041395d36bb1ca1b898a 507 Gene3D G3DSA:1.10.275.10 6 110 1.8E-13 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS15755 56dd90ce89dc298aefaf11ba76048aa2 392 Pfam PF04914 DltD protein 73 390 4.7E-58 T 28-03-2018 IPR006998 DltD AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.5E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.5E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.5E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 SUPERFAMILY SSF51735 1 253 5.44E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 Gene3D G3DSA:3.40.50.720 1 48 9.6E-13 T 28-03-2018 AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 Gene3D G3DSA:3.40.50.720 49 258 1.8E-39 T 28-03-2018 AL504_RS24840 277d9a90e7e243078eeec0ee468f048c 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 2.5E-36 T 28-03-2018 AL504_RS00290 f45cf40bf6b523cd1940709afd9ead38 503 SMART SM00327 92 260 2.2E-10 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS00290 f45cf40bf6b523cd1940709afd9ead38 503 Gene3D G3DSA:1.25.40.10 358 454 2.2E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00290 f45cf40bf6b523cd1940709afd9ead38 503 SUPERFAMILY SSF48452 361 426 1.16E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00290 f45cf40bf6b523cd1940709afd9ead38 503 SUPERFAMILY SSF53300 93 245 1.05E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS00290 f45cf40bf6b523cd1940709afd9ead38 503 Pfam PF13519 von Willebrand factor type A domain 95 201 4.9E-15 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS00290 f45cf40bf6b523cd1940709afd9ead38 503 SMART SM00028 386 419 4.6E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS00290 f45cf40bf6b523cd1940709afd9ead38 503 Gene3D G3DSA:3.40.50.410 92 266 2.1E-20 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 Gene3D G3DSA:3.40.1190.10 91 312 1.1E-41 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 SUPERFAMILY SSF53244 310 452 1.96E-36 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 Pfam PF08245 Mur ligase middle domain 108 291 8.7E-20 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 57.218 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 Gene3D G3DSA:3.40.50.720 1 90 2.1E-10 T 28-03-2018 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 Pfam PF01225 Mur ligase family, catalytic domain 2 97 3.8E-16 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 452 4.9E-200 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 SUPERFAMILY SSF51984 1 89 6.02E-19 T 28-03-2018 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 Gene3D G3DSA:3.90.190.20 313 454 1.0E-28 T 28-03-2018 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 SUPERFAMILY SSF53623 98 308 8.63E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL504_RS15810 4e972c7ab9125d37e5b1e6ab9148ab3f 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 390 2.6E-10 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL504_RS03085 e1c0a46f37978e1c5abb217a158ba35a 366 Pfam PF00571 CBS domain 221 271 2.7E-7 T 28-03-2018 IPR000644 CBS domain AL504_RS03085 e1c0a46f37978e1c5abb217a158ba35a 366 Pfam PF00571 CBS domain 292 346 9.0E-8 T 28-03-2018 IPR000644 CBS domain AL504_RS03085 e1c0a46f37978e1c5abb217a158ba35a 366 Gene3D G3DSA:3.10.580.10 210 362 8.2E-24 T 28-03-2018 AL504_RS03085 e1c0a46f37978e1c5abb217a158ba35a 366 Pfam PF04982 HPP family 34 153 7.3E-37 T 28-03-2018 IPR007065 HPP AL504_RS03085 e1c0a46f37978e1c5abb217a158ba35a 366 SUPERFAMILY SSF54631 208 346 1.89E-25 T 28-03-2018 AL504_RS03085 e1c0a46f37978e1c5abb217a158ba35a 366 SMART SM00116 227 275 0.2 T 28-03-2018 IPR000644 CBS domain AL504_RS03085 e1c0a46f37978e1c5abb217a158ba35a 366 SMART SM00116 299 346 0.03 T 28-03-2018 IPR000644 CBS domain AL504_RS18890 e0a3eacfbc369e4ec83a3deddbaf2f2a 155 Pfam PF13455 Meiotically up-regulated gene 113 80 143 3.1E-11 T 28-03-2018 AL504_RS18890 e0a3eacfbc369e4ec83a3deddbaf2f2a 155 SMART SM00974 74 149 4.2E-4 T 28-03-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding AL504_RS02670 064102101388e6e58057c99457b7b075 408 Gene3D G3DSA:1.20.1250.20 188 408 2.3E-26 T 28-03-2018 AL504_RS02670 064102101388e6e58057c99457b7b075 408 Gene3D G3DSA:1.20.1250.20 1 187 2.1E-22 T 28-03-2018 AL504_RS02670 064102101388e6e58057c99457b7b075 408 SUPERFAMILY SSF103473 2 397 2.62E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS02670 064102101388e6e58057c99457b7b075 408 Pfam PF07690 Major Facilitator Superfamily 10 286 7.8E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS17545 cc1365f538f792862df52a6731d26985 229 Gene3D G3DSA:1.10.10.10 127 229 4.6E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17545 cc1365f538f792862df52a6731d26985 229 SUPERFAMILY SSF52172 1 119 8.82E-39 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS17545 cc1365f538f792862df52a6731d26985 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 8.6E-91 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AL504_RS17545 cc1365f538f792862df52a6731d26985 229 Gene3D G3DSA:3.40.50.2300 1 126 7.7E-36 T 28-03-2018 AL504_RS17545 cc1365f538f792862df52a6731d26985 229 SMART SM00862 149 224 5.9E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS17545 cc1365f538f792862df52a6731d26985 229 Pfam PF00072 Response regulator receiver domain 3 111 3.6E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS17545 cc1365f538f792862df52a6731d26985 229 SMART SM00448 1 111 1.4E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS17545 cc1365f538f792862df52a6731d26985 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 2.2E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS17545 cc1365f538f792862df52a6731d26985 229 SUPERFAMILY SSF46894 127 225 9.64E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS20110 5bbbc78d6ee2f22830d88d07d0a8959a 358 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 343 3.7E-116 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL504_RS20110 5bbbc78d6ee2f22830d88d07d0a8959a 358 PIRSF PIRSF001455 14 357 2.7E-108 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL504_RS20110 5bbbc78d6ee2f22830d88d07d0a8959a 358 Gene3D G3DSA:1.20.1090.10 172 358 2.2E-64 T 28-03-2018 AL504_RS20110 5bbbc78d6ee2f22830d88d07d0a8959a 358 Pfam PF01761 3-dehydroquinate synthase 66 323 1.5E-106 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL504_RS20110 5bbbc78d6ee2f22830d88d07d0a8959a 358 SUPERFAMILY SSF56796 10 353 1.11E-110 T 28-03-2018 AL504_RS20110 5bbbc78d6ee2f22830d88d07d0a8959a 358 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 355 40.875 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL504_RS20110 5bbbc78d6ee2f22830d88d07d0a8959a 358 Gene3D G3DSA:3.40.50.1970 6 171 9.8E-47 T 28-03-2018 AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 SUPERFAMILY SSF55594 1 87 4.84E-28 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 Pfam PF00381 PTS HPr component phosphorylation site 5 82 2.4E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 Gene3D G3DSA:3.30.1340.10 1 87 4.8E-29 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.0E-29 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.4E-15 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.4E-15 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL504_RS08395 f2dc7e06929f846bf95dc9cf8da8fbeb 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.4E-15 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 Pfam PF00155 Aminotransferase class I and II 126 448 5.6E-39 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 SMART SM00345 11 70 2.0E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 SUPERFAMILY SSF53383 89 461 4.98E-83 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 Gene3D G3DSA:1.10.10.10 1 72 2.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 SUPERFAMILY SSF46785 3 73 3.87E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 Gene3D G3DSA:3.40.640.10 122 370 8.9E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 Gene3D G3DSA:3.90.1150.10 371 464 6.7E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS02500 5abe075b96e2919fec38a70889dae9c8 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 5.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS00060 87d4b189f0016167a2d6ffc45accd5d5 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 184 1.5E-11 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL504_RS00060 87d4b189f0016167a2d6ffc45accd5d5 210 SUPERFAMILY SSF52540 1 186 3.53E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00060 87d4b189f0016167a2d6ffc45accd5d5 210 Gene3D G3DSA:3.40.50.300 2 63 9.2E-14 T 28-03-2018 AL504_RS00060 87d4b189f0016167a2d6ffc45accd5d5 210 Gene3D G3DSA:3.40.50.300 64 209 3.6E-16 T 28-03-2018 AL504_RS00060 87d4b189f0016167a2d6ffc45accd5d5 210 PIRSF PIRSF009320 2 209 9.6E-30 T 28-03-2018 AL504_RS23415 d75c31efb46b80c79d1a1a0d1ad41234 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 227 1.8E-19 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL504_RS23415 d75c31efb46b80c79d1a1a0d1ad41234 268 Gene3D G3DSA:3.40.50.1000 13 263 3.2E-24 T 28-03-2018 IPR023214 HAD-like domain AL504_RS23415 d75c31efb46b80c79d1a1a0d1ad41234 268 SUPERFAMILY SSF56784 13 260 6.71E-29 T 28-03-2018 IPR023214 HAD-like domain AL504_RS23415 d75c31efb46b80c79d1a1a0d1ad41234 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 18 84 2.9E-6 T 28-03-2018 IPR023214 HAD-like domain AL504_RS03870 bdb1b10e4ad1a2c0d901998956cb5352 366 Pfam PF02311 AraC-like ligand binding domain 256 323 3.8E-7 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS03870 bdb1b10e4ad1a2c0d901998956cb5352 366 Gene3D G3DSA:2.60.120.10 11 331 1.2E-25 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS03870 bdb1b10e4ad1a2c0d901998956cb5352 366 SUPERFAMILY SSF51182 24 349 2.29E-54 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS09590 035665ec0db36bda3bdf761be4927399 96 Pfam PF08809 Phage related hypothetical protein (DUF1799) 14 93 1.5E-28 T 28-03-2018 IPR014915 Bacteriophage TLS, TfmB AL504_RS01060 5977c6c14bbcd50309c9e884cb6ab049 462 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 400 4.8E-51 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS01060 5977c6c14bbcd50309c9e884cb6ab049 462 SUPERFAMILY SSF53686 48 397 1.96E-46 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS01060 5977c6c14bbcd50309c9e884cb6ab049 462 Gene3D G3DSA:3.40.50.1100 106 222 1.6E-24 T 28-03-2018 AL504_RS01060 5977c6c14bbcd50309c9e884cb6ab049 462 Gene3D G3DSA:3.40.50.1100 223 440 6.2E-21 T 28-03-2018 AL504_RS01060 5977c6c14bbcd50309c9e884cb6ab049 462 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 455 196.442 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AL504_RS01060 5977c6c14bbcd50309c9e884cb6ab049 462 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 13 436 3.0E-154 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AL504_RS11495 9475e81cc86d548335b942539a1d5c1e 291 Pfam PF04305 Protein of unknown function (DUF455) 34 272 2.6E-92 T 28-03-2018 IPR007402 Protein of unknown function DUF455 AL504_RS11495 9475e81cc86d548335b942539a1d5c1e 291 SUPERFAMILY SSF47240 88 277 3.72E-20 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS11495 9475e81cc86d548335b942539a1d5c1e 291 Gene3D G3DSA:1.20.1260.10 74 249 1.8E-41 T 28-03-2018 IPR012347 Ferritin-related AL504_RS11495 9475e81cc86d548335b942539a1d5c1e 291 PIRSF PIRSF012318 17 279 3.3E-94 T 28-03-2018 IPR011197 Uncharacterised conserved protein UCP012318 AL504_RS10265 05966ce03e17325c85235c5ee98b3207 275 Pfam PF02230 Phospholipase/Carboxylesterase 158 260 6.4E-13 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AL504_RS10265 05966ce03e17325c85235c5ee98b3207 275 Gene3D G3DSA:3.40.50.1820 45 274 1.8E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS10265 05966ce03e17325c85235c5ee98b3207 275 SUPERFAMILY SSF53474 59 259 1.33E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS18385 7e0ed6e0178ba0a35cffc5f89448ce90 208 Gene3D G3DSA:3.30.450.40 13 207 6.0E-10 T 28-03-2018 IPR029016 GAF domain-like AL504_RS18385 7e0ed6e0178ba0a35cffc5f89448ce90 208 SUPERFAMILY SSF55781 95 189 1.96E-8 T 28-03-2018 IPR029016 GAF domain-like AL504_RS07460 c8391ad1718566e7473e129701476dda 320 SUPERFAMILY SSF51735 15 185 1.62E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07460 c8391ad1718566e7473e129701476dda 320 Gene3D G3DSA:1.10.1040.10 189 293 8.1E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS07460 c8391ad1718566e7473e129701476dda 320 Gene3D G3DSA:3.40.50.720 1 187 7.2E-42 T 28-03-2018 AL504_RS07460 c8391ad1718566e7473e129701476dda 320 SUPERFAMILY SSF48179 189 294 5.1E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS07460 c8391ad1718566e7473e129701476dda 320 PIRSF PIRSF000105 9 312 7.2E-70 T 28-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AL504_RS07460 c8391ad1718566e7473e129701476dda 320 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 288 3.8E-18 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS07460 c8391ad1718566e7473e129701476dda 320 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 211 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS07460 c8391ad1718566e7473e129701476dda 320 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 17 186 1.2E-41 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL504_RS02675 c4941111591444b3b576dadcf5107a39 461 SUPERFAMILY SSF103473 26 455 2.09E-36 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS02675 c4941111591444b3b576dadcf5107a39 461 Gene3D G3DSA:1.20.1250.20 10 233 2.1E-15 T 28-03-2018 AL504_RS02675 c4941111591444b3b576dadcf5107a39 461 Pfam PF07690 Major Facilitator Superfamily 36 370 1.6E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS02675 c4941111591444b3b576dadcf5107a39 461 Gene3D G3DSA:1.20.1250.20 238 458 1.7E-19 T 28-03-2018 AL504_RS02675 c4941111591444b3b576dadcf5107a39 461 TIGRFAM TIGR00886 2A0108: nitrite transporter 27 413 2.2E-105 T 28-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AL504_RS03255 a25790df4e5cbfde7344532b4153c540 378 SUPERFAMILY SSF55729 146 341 1.01E-64 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS03255 a25790df4e5cbfde7344532b4153c540 378 SMART SM01006 179 226 1.3E-14 T 28-03-2018 IPR019432 Siderophore biosynthesis protein, conserved domain AL504_RS03255 a25790df4e5cbfde7344532b4153c540 378 Pfam PF13523 Acetyltransferase (GNAT) domain 184 327 2.2E-49 T 28-03-2018 AL504_RS03255 a25790df4e5cbfde7344532b4153c540 378 Gene3D G3DSA:3.40.630.30 144 344 3.7E-29 T 28-03-2018 AL504_RS09930 12f8da3e42274980e2e1ba9f73d39d6a 577 SUPERFAMILY SSF161098 375 564 5.36E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS09930 12f8da3e42274980e2e1ba9f73d39d6a 577 Gene3D G3DSA:1.10.3720.10 62 271 1.0E-19 T 28-03-2018 AL504_RS09930 12f8da3e42274980e2e1ba9f73d39d6a 577 Gene3D G3DSA:1.10.3720.10 364 569 3.0E-20 T 28-03-2018 AL504_RS09930 12f8da3e42274980e2e1ba9f73d39d6a 577 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 253 5.1E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS09930 12f8da3e42274980e2e1ba9f73d39d6a 577 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 561 5.2E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS09930 12f8da3e42274980e2e1ba9f73d39d6a 577 SUPERFAMILY SSF161098 63 256 6.67E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19500 d5db8da5ff42d8401841a8a3761e5a5e 271 Gene3D G3DSA:3.40.630.30 47 269 3.8E-19 T 28-03-2018 AL504_RS19500 d5db8da5ff42d8401841a8a3761e5a5e 271 SUPERFAMILY SSF55729 99 258 4.71E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS19500 d5db8da5ff42d8401841a8a3761e5a5e 271 Pfam PF00583 Acetyltransferase (GNAT) family 179 254 1.8E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS27940 491f7aaca30c755518104a202814d03f 419 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS27940 491f7aaca30c755518104a202814d03f 419 SUPERFAMILY SSF103473 4 417 1.24E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS27940 491f7aaca30c755518104a202814d03f 419 Gene3D G3DSA:1.20.1250.20 213 419 2.7E-24 T 28-03-2018 AL504_RS27940 491f7aaca30c755518104a202814d03f 419 Pfam PF07690 Major Facilitator Superfamily 42 375 1.4E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS27940 491f7aaca30c755518104a202814d03f 419 Gene3D G3DSA:1.20.1250.20 3 212 1.8E-23 T 28-03-2018 AL504_RS27350 7b3c89078101500ced6750a0426ee541 296 Pfam PF13437 HlyD family secretion protein 145 226 1.0E-7 T 28-03-2018 AL504_RS27350 7b3c89078101500ced6750a0426ee541 296 Pfam PF13533 Biotin-lipoyl like 37 83 1.7E-17 T 28-03-2018 AL504_RS27350 7b3c89078101500ced6750a0426ee541 296 SUPERFAMILY SSF111369 32 171 6.28E-20 T 28-03-2018 AL504_RS27350 7b3c89078101500ced6750a0426ee541 296 Gene3D G3DSA:2.40.50.100 36 108 2.5E-16 T 28-03-2018 AL504_RS27350 7b3c89078101500ced6750a0426ee541 296 Gene3D G3DSA:2.40.50.100 140 278 0.0031 T 28-03-2018 AL504_RS27350 7b3c89078101500ced6750a0426ee541 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 204 1.4E-29 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS01300 0a4261e5ce0ec74dfe8bf6cf0604d05a 262 Gene3D G3DSA:3.40.50.720 2 128 1.5E-22 T 28-03-2018 AL504_RS01300 0a4261e5ce0ec74dfe8bf6cf0604d05a 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01300 0a4261e5ce0ec74dfe8bf6cf0604d05a 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01300 0a4261e5ce0ec74dfe8bf6cf0604d05a 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01300 0a4261e5ce0ec74dfe8bf6cf0604d05a 262 SUPERFAMILY SSF51735 3 227 9.03E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01300 0a4261e5ce0ec74dfe8bf6cf0604d05a 262 Gene3D G3DSA:3.40.50.720 129 228 9.5E-14 T 28-03-2018 AL504_RS01300 0a4261e5ce0ec74dfe8bf6cf0604d05a 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 206 2.3E-14 T 28-03-2018 AL504_RS28310 90ef6eaf77d57b487a34be2952755f29 350 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 8 334 31.272 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS28310 90ef6eaf77d57b487a34be2952755f29 350 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 12 334 1.2E-97 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS28310 90ef6eaf77d57b487a34be2952755f29 350 Gene3D G3DSA:3.40.718.10 1 336 9.7E-112 T 28-03-2018 AL504_RS28310 90ef6eaf77d57b487a34be2952755f29 350 SUPERFAMILY SSF53659 10 336 3.98E-94 T 28-03-2018 AL504_RS28310 90ef6eaf77d57b487a34be2952755f29 350 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 41 328 5.0E-91 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL504_RS30160 60644df72d970a92c0481b081f726920 146 Pfam PF07849 Protein of unknown function (DUF1641) 97 134 2.5E-5 T 28-03-2018 IPR012440 Protein of unknown function DUF1641 AL504_RS13645 32db1926f06a89c4fdca20f12b335658 222 Pfam PF03591 AzlC protein 6 150 1.0E-31 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 17 310 7.2E-117 T 28-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 62 82 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 187 205 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 207 228 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 293 311 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 251 272 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 273 292 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 37 60 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 163 186 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 PRINTS PR01002 Flagellar protein FlgJ signature 229 250 1.7E-58 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 Pfam PF10135 Rod binding protein 59 105 2.5E-12 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 Gene3D G3DSA:1.10.530.10 160 315 5.0E-34 T 28-03-2018 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 176 310 1.3E-20 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL504_RS06415 320fbbed9b5e4beccc951220bdc15279 327 SMART SM00047 158 318 2.0E-44 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL504_RS21325 d31831b01c5b6acbeda3d739069aa31c 229 Gene3D G3DSA:3.40.50.2300 1 140 1.9E-31 T 28-03-2018 AL504_RS21325 d31831b01c5b6acbeda3d739069aa31c 229 SUPERFAMILY SSF52172 1 127 3.27E-38 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS21325 d31831b01c5b6acbeda3d739069aa31c 229 SUPERFAMILY SSF46689 160 221 1.22E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS21325 d31831b01c5b6acbeda3d739069aa31c 229 SMART SM00448 2 114 8.3E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS21325 d31831b01c5b6acbeda3d739069aa31c 229 Gene3D G3DSA:1.10.10.60 165 226 1.6E-11 T 28-03-2018 AL504_RS21325 d31831b01c5b6acbeda3d739069aa31c 229 Pfam PF00072 Response regulator receiver domain 4 114 4.8E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS13070 ec24db63faf4c7368866becabcb4de3b 304 Gene3D G3DSA:3.40.190.10 188 274 2.5E-18 T 28-03-2018 AL504_RS13070 ec24db63faf4c7368866becabcb4de3b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 75 1.1E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS13070 ec24db63faf4c7368866becabcb4de3b 304 SUPERFAMILY SSF46785 14 122 3.81E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13070 ec24db63faf4c7368866becabcb4de3b 304 Pfam PF03466 LysR substrate binding domain 100 302 9.1E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS13070 ec24db63faf4c7368866becabcb4de3b 304 SUPERFAMILY SSF53850 101 302 4.71E-38 T 28-03-2018 AL504_RS13070 ec24db63faf4c7368866becabcb4de3b 304 Gene3D G3DSA:1.10.10.10 9 96 1.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13070 ec24db63faf4c7368866becabcb4de3b 304 Gene3D G3DSA:3.40.190.10 101 187 2.0E-16 T 28-03-2018 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 Pfam PF13087 AAA domain 1434 1612 7.7E-13 T 28-03-2018 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 Gene3D G3DSA:3.40.960.10 1660 1780 5.8E-28 T 28-03-2018 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 Gene3D G3DSA:3.40.50.300 698 1445 9.5E-42 T 28-03-2018 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 Pfam PF13195 Protein of unknown function (DUF4011) 412 585 2.0E-41 T 28-03-2018 IPR025103 Protein of unknown function DUF4011 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 Gene3D G3DSA:3.40.50.300 1446 1631 2.1E-16 T 28-03-2018 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 SUPERFAMILY SSF52980 1657 1768 2.31E-15 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 Pfam PF11784 Protein of unknown function (DUF3320) 1830 1877 1.8E-14 T 28-03-2018 IPR021754 Protein of unknown function DUF3320 AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 SUPERFAMILY SSF52540 689 764 1.34E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12945 07c5a738127377575418f61b2a249d6b 1996 SUPERFAMILY SSF52540 1329 1642 1.34E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 Pfam PF03466 LysR substrate binding domain 94 291 1.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 Gene3D G3DSA:1.10.10.10 1 87 1.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 Gene3D G3DSA:3.40.190.10 175 260 4.0E-20 T 28-03-2018 AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 SUPERFAMILY SSF46785 5 112 8.06E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 SUPERFAMILY SSF53850 94 293 4.76E-41 T 28-03-2018 AL504_RS30560 3674f1c1d925154dc9c08e286300523d 295 Gene3D G3DSA:3.40.190.10 94 174 1.4E-12 T 28-03-2018 AL504_RS26360 1781f02fc3da091c573abe63d175527a 121 Gene3D G3DSA:3.40.50.2300 1 120 2.9E-30 T 28-03-2018 AL504_RS26360 1781f02fc3da091c573abe63d175527a 121 SUPERFAMILY SSF52172 7 120 3.84E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS26360 1781f02fc3da091c573abe63d175527a 121 Pfam PF00072 Response regulator receiver domain 9 117 6.7E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS26360 1781f02fc3da091c573abe63d175527a 121 SMART SM00448 7 117 9.8E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 Pfam PF03466 LysR substrate binding domain 89 294 3.9E-29 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 SUPERFAMILY SSF53850 89 295 3.44E-29 T 28-03-2018 AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 SUPERFAMILY SSF46785 1 82 7.62E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 Gene3D G3DSA:1.10.10.10 1 83 8.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 Gene3D G3DSA:3.40.190.10 183 269 3.7E-14 T 28-03-2018 AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00445 3bd885ffe796fce940779a1e437e3052 295 Gene3D G3DSA:3.40.190.10 88 182 3.6E-13 T 28-03-2018 AL504_RS14940 49d66a96d55cba9ea6d9020161007060 313 Gene3D G3DSA:3.40.190.10 178 266 1.1E-29 T 28-03-2018 AL504_RS14940 49d66a96d55cba9ea6d9020161007060 313 Pfam PF03466 LysR substrate binding domain 88 295 2.2E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14940 49d66a96d55cba9ea6d9020161007060 313 SUPERFAMILY SSF46785 3 88 2.09E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14940 49d66a96d55cba9ea6d9020161007060 313 SUPERFAMILY SSF53850 89 298 7.6E-47 T 28-03-2018 AL504_RS14940 49d66a96d55cba9ea6d9020161007060 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.1E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14940 49d66a96d55cba9ea6d9020161007060 313 Gene3D G3DSA:1.10.10.10 1 90 4.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14940 49d66a96d55cba9ea6d9020161007060 313 Gene3D G3DSA:3.40.190.10 92 177 4.3E-9 T 28-03-2018 AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 Gene3D G3DSA:1.20.1560.10 9 347 7.3E-40 T 28-03-2018 AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 SMART SM00382 392 577 1.5E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 Pfam PF00664 ABC transporter transmembrane region 39 284 8.9E-33 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 Pfam PF00005 ABC transporter 386 531 6.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 35 572 3.4E-184 T 28-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 Gene3D G3DSA:3.40.50.300 352 581 3.5E-58 T 28-03-2018 AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 SUPERFAMILY SSF52540 363 578 2.09E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21170 976a328e5e308b11450dda2abf20e0f1 581 SUPERFAMILY SSF90123 22 351 2.88E-51 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS23950 03b1c351037bb8f9ef99e72e2709f6a0 498 SUPERFAMILY SSF50974 21 358 6.28E-63 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AL504_RS23950 03b1c351037bb8f9ef99e72e2709f6a0 498 Gene3D G3DSA:2.130.10.10 219 459 2.6E-19 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS23950 03b1c351037bb8f9ef99e72e2709f6a0 498 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 317 354 3.4E-10 T 28-03-2018 IPR011964 YVTN beta-propeller repeat AL504_RS23950 03b1c351037bb8f9ef99e72e2709f6a0 498 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 100 140 3.0E-7 T 28-03-2018 IPR011964 YVTN beta-propeller repeat AL504_RS23950 03b1c351037bb8f9ef99e72e2709f6a0 498 Gene3D G3DSA:2.130.10.10 123 218 6.6E-14 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS23950 03b1c351037bb8f9ef99e72e2709f6a0 498 Gene3D G3DSA:2.130.10.10 25 122 7.4E-11 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS22755 6bf7dc4147f9df6985b355405c60c102 324 SUPERFAMILY SSF53850 109 282 6.88E-14 T 28-03-2018 AL504_RS22755 6bf7dc4147f9df6985b355405c60c102 324 Gene3D G3DSA:3.40.190.10 124 234 4.4E-13 T 28-03-2018 AL504_RS22755 6bf7dc4147f9df6985b355405c60c102 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 319 7.5E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS22755 6bf7dc4147f9df6985b355405c60c102 324 PIRSF PIRSF017082 2 324 8.9E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 SUPERFAMILY SSF51905 9 191 1.01E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 SUPERFAMILY SSF51905 282 387 1.01E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 Gene3D G3DSA:3.50.50.60 3 431 1.1E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 Pfam PF01494 FAD binding domain 8 356 1.4E-85 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 8.3E-39 T 28-03-2018 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 326 8.3E-39 T 28-03-2018 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 328 346 8.3E-39 T 28-03-2018 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 8.3E-39 T 28-03-2018 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 346 362 8.3E-39 T 28-03-2018 AL504_RS01340 ff775043bc31469a1f58081f6c962a1b 512 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 170 185 8.3E-39 T 28-03-2018 AL504_RS07580 5641d28ac965bfe4cdb696740a247fcc 261 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 53 235 4.6E-59 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07580 5641d28ac965bfe4cdb696740a247fcc 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 53 70 4.0E-37 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07580 5641d28ac965bfe4cdb696740a247fcc 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 108 128 4.0E-37 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07580 5641d28ac965bfe4cdb696740a247fcc 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 164 190 4.0E-37 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07580 5641d28ac965bfe4cdb696740a247fcc 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 70 90 4.0E-37 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07580 5641d28ac965bfe4cdb696740a247fcc 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 129 149 4.0E-37 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07580 5641d28ac965bfe4cdb696740a247fcc 261 Pfam PF01578 Cytochrome C assembly protein 34 192 4.5E-24 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL504_RS08015 4065d37a75ded7ee81fddc12a73c2040 198 SUPERFAMILY SSF89392 22 182 3.57E-8 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL504_RS08015 4065d37a75ded7ee81fddc12a73c2040 198 Gene3D G3DSA:2.50.20.10 21 192 1.6E-14 T 28-03-2018 AL504_RS06330 c99a71c15faf39b7fc466911f237674c 491 SMART SM00382 201 388 1.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS06330 c99a71c15faf39b7fc466911f237674c 491 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 189 404 2.0E-70 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS06330 c99a71c15faf39b7fc466911f237674c 491 SUPERFAMILY SSF52540 136 410 9.1E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS06330 c99a71c15faf39b7fc466911f237674c 491 Gene3D G3DSA:3.40.50.300 109 404 2.9E-79 T 28-03-2018 AL504_RS06330 c99a71c15faf39b7fc466911f237674c 491 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 28 482 1.1E-175 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS06330 c99a71c15faf39b7fc466911f237674c 491 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 42 481 9.1E-193 T 28-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS06330 c99a71c15faf39b7fc466911f237674c 491 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 395 404 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL504_RS24895 fa7de905be5fbafe590dc6fbbbe29a1b 190 SUPERFAMILY SSF47413 12 80 6.48E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS24895 fa7de905be5fbafe590dc6fbbbe29a1b 190 Gene3D G3DSA:2.60.120.10 78 190 2.9E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS24895 fa7de905be5fbafe590dc6fbbbe29a1b 190 SUPERFAMILY SSF51182 68 189 8.16E-15 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS24895 fa7de905be5fbafe590dc6fbbbe29a1b 190 Gene3D G3DSA:1.10.260.40 8 77 2.6E-19 T 28-03-2018 AL504_RS24895 fa7de905be5fbafe590dc6fbbbe29a1b 190 SMART SM00530 18 73 1.4E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS24895 fa7de905be5fbafe590dc6fbbbe29a1b 190 Pfam PF13560 Helix-turn-helix domain 14 69 4.8E-15 T 28-03-2018 AL504_RS17705 c90bac707453e06c019e2c4b06ee8985 175 Pfam PF04542 Sigma-70 region 2 15 82 2.9E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17705 c90bac707453e06c019e2c4b06ee8985 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 165 7.3E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17705 c90bac707453e06c019e2c4b06ee8985 175 Gene3D G3DSA:1.10.1740.10 8 81 2.4E-15 T 28-03-2018 AL504_RS17705 c90bac707453e06c019e2c4b06ee8985 175 Pfam PF08281 Sigma-70, region 4 115 166 5.4E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17705 c90bac707453e06c019e2c4b06ee8985 175 Gene3D G3DSA:1.10.10.10 82 168 6.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17705 c90bac707453e06c019e2c4b06ee8985 175 SUPERFAMILY SSF88946 12 100 2.75E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS17705 c90bac707453e06c019e2c4b06ee8985 175 SUPERFAMILY SSF88659 107 166 9.42E-11 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 SUPERFAMILY SSF56059 1 238 2.83E-83 T 28-03-2018 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 Pfam PF00549 CoA-ligase 262 381 2.8E-25 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 Gene3D G3DSA:3.40.50.261 240 385 6.5E-45 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 Gene3D G3DSA:3.30.1490.20 21 95 3.1E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 PIRSF PIRSF001554 1 386 5.3E-153 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 3.4E-159 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 SUPERFAMILY SSF52210 239 385 5.1E-54 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 Gene3D G3DSA:3.30.470.20 96 239 4.0E-55 T 28-03-2018 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 Pfam PF08442 ATP-grasp domain 2 201 1.4E-79 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS10695 aab2ec90a9dad869ff8247577c02508e 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.793 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL504_RS14335 2e8a9ccbe14bd699956ff215f710f373 507 Pfam PF05683 Fumarase C-terminus 289 490 4.1E-81 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS14335 2e8a9ccbe14bd699956ff215f710f373 507 PIRSF PIRSF001394 1 507 2.5E-210 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AL504_RS14335 2e8a9ccbe14bd699956ff215f710f373 507 Pfam PF05681 Fumarate hydratase (Fumerase) 12 285 1.1E-98 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL504_RS14335 2e8a9ccbe14bd699956ff215f710f373 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 488 4.9E-46 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS14335 2e8a9ccbe14bd699956ff215f710f373 507 SUPERFAMILY SSF117457 320 488 7.06E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS14335 2e8a9ccbe14bd699956ff215f710f373 507 Gene3D G3DSA:3.20.130.10 316 489 1.2E-64 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS14335 2e8a9ccbe14bd699956ff215f710f373 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 285 7.7E-63 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL504_RS23635 4b121380945dcbc73b89356779fed05f 321 SUPERFAMILY SSF103481 60 160 3.01E-10 T 28-03-2018 AL504_RS23635 4b121380945dcbc73b89356779fed05f 321 Pfam PF00892 EamA-like transporter family 170 306 2.7E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS23635 4b121380945dcbc73b89356779fed05f 321 Pfam PF00892 EamA-like transporter family 32 158 2.0E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS23635 4b121380945dcbc73b89356779fed05f 321 SUPERFAMILY SSF103481 235 310 1.7E-10 T 28-03-2018 AL504_RS24550 dbbdf5d51bac87918d973d88b68d47cc 231 Pfam PF00805 Pentapeptide repeats (8 copies) 89 125 1.4E-10 T 28-03-2018 IPR001646 Pentapeptide repeat AL504_RS24550 dbbdf5d51bac87918d973d88b68d47cc 231 Pfam PF13599 Pentapeptide repeats (9 copies) 144 204 4.0E-9 T 28-03-2018 IPR001646 Pentapeptide repeat AL504_RS24550 dbbdf5d51bac87918d973d88b68d47cc 231 Pfam PF13599 Pentapeptide repeats (9 copies) 33 84 7.6E-7 T 28-03-2018 IPR001646 Pentapeptide repeat AL504_RS24550 dbbdf5d51bac87918d973d88b68d47cc 231 SUPERFAMILY SSF141571 81 228 5.3E-32 T 28-03-2018 AL504_RS24550 dbbdf5d51bac87918d973d88b68d47cc 231 Gene3D G3DSA:2.160.20.80 134 227 2.5E-19 T 28-03-2018 AL504_RS24550 dbbdf5d51bac87918d973d88b68d47cc 231 Gene3D G3DSA:2.160.20.80 2 133 3.2E-23 T 28-03-2018 AL504_RS05985 6c207b331682291b2715d42cae419b79 336 SUPERFAMILY SSF51430 1 311 5.11E-95 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS05985 6c207b331682291b2715d42cae419b79 336 Gene3D G3DSA:3.20.20.100 3 312 3.9E-88 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS05985 6c207b331682291b2715d42cae419b79 336 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.6E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS05985 6c207b331682291b2715d42cae419b79 336 PRINTS PR00069 Aldo-keto reductase signature 39 63 1.6E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS05985 6c207b331682291b2715d42cae419b79 336 PRINTS PR00069 Aldo-keto reductase signature 103 121 1.6E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS05985 6c207b331682291b2715d42cae419b79 336 Pfam PF00248 Aldo/keto reductase family 15 308 4.1E-63 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS10720 17a140d4c92fd5c25b7a92a7cda68232 250 Gene3D G3DSA:1.10.10.10 107 154 1.5E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10720 17a140d4c92fd5c25b7a92a7cda68232 250 Gene3D G3DSA:1.10.10.10 202 250 1.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10720 17a140d4c92fd5c25b7a92a7cda68232 250 Gene3D G3DSA:1.10.10.10 157 197 1.3E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10720 17a140d4c92fd5c25b7a92a7cda68232 250 Pfam PF02631 RecX family 133 245 1.1E-26 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AL504_RS10720 17a140d4c92fd5c25b7a92a7cda68232 250 Hamap MF_01114 Regulatory protein RecX [recX]. 106 250 13.615 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AL504_RS20135 8469b8432905cbe5660fb59b6d3f5cf9 173 Pfam PF00436 Single-strand binding protein family 4 109 2.3E-43 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL504_RS20135 8469b8432905cbe5660fb59b6d3f5cf9 173 Gene3D G3DSA:2.40.50.140 1 116 3.3E-43 T 28-03-2018 AL504_RS20135 8469b8432905cbe5660fb59b6d3f5cf9 173 PIRSF PIRSF002070 1 161 1.0E-36 T 28-03-2018 AL504_RS20135 8469b8432905cbe5660fb59b6d3f5cf9 173 Hamap MF_00984 Single-stranded DNA-binding protein. 4 113 38.478 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL504_RS20135 8469b8432905cbe5660fb59b6d3f5cf9 173 SUPERFAMILY SSF50249 3 173 7.2E-62 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS20135 8469b8432905cbe5660fb59b6d3f5cf9 173 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 173 2.0E-56 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 Pfam PF12833 Helix-turn-helix domain 192 270 9.5E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 Gene3D G3DSA:1.10.10.60 224 274 8.5E-10 T 28-03-2018 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 Gene3D G3DSA:1.10.10.60 179 223 8.7E-13 T 28-03-2018 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 SUPERFAMILY SSF51182 19 215 4.8E-21 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 264 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 SMART SM00342 186 268 4.5E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 SUPERFAMILY SSF46689 223 269 1.03E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 Gene3D G3DSA:2.60.120.10 5 178 2.4E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 5.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS21905 fcbc083a0c3ebef956d018bf5de9f201 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 5.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 SUPERFAMILY SSF56042 169 349 5.68E-47 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 162 2.0E-19 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 SUPERFAMILY SSF55326 12 167 4.34E-40 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 Hamap MF_00625 Selenide, water dikinase [selD]. 10 353 44.255 T 28-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 TIGRFAM TIGR00476 selD: selenide, water dikinase 12 321 5.5E-132 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 PIRSF PIRSF036407 6 352 6.8E-116 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 Gene3D G3DSA:3.90.650.10 169 349 4.1E-42 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 350 6.9E-29 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL504_RS17180 61ee27fdf4ad17077f8904fa86c74623 353 Gene3D G3DSA:3.30.1330.10 3 167 1.8E-33 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL504_RS26055 5df3a20bdd216f498a33de6ebb70b6ff 226 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 5.8E-109 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AL504_RS26055 5df3a20bdd216f498a33de6ebb70b6ff 226 Pfam PF01144 Coenzyme A transferase 8 217 1.1E-61 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS26055 5df3a20bdd216f498a33de6ebb70b6ff 226 Gene3D G3DSA:3.40.1080.10 2 224 9.5E-79 T 28-03-2018 AL504_RS26055 5df3a20bdd216f498a33de6ebb70b6ff 226 SUPERFAMILY SSF100950 2 219 2.99E-75 T 28-03-2018 AL504_RS26055 5df3a20bdd216f498a33de6ebb70b6ff 226 SMART SM00882 6 219 1.2E-75 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS11035 ddebf7ad688fb4552d2e5b4b881bb3d6 327 PIRSF PIRSF017082 1 325 4.9E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11035 ddebf7ad688fb4552d2e5b4b881bb3d6 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 321 1.5E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11035 ddebf7ad688fb4552d2e5b4b881bb3d6 327 SUPERFAMILY SSF53850 112 286 3.98E-11 T 28-03-2018 AL504_RS11035 ddebf7ad688fb4552d2e5b4b881bb3d6 327 Gene3D G3DSA:3.40.190.10 123 231 3.8E-7 T 28-03-2018 AL504_RS10980 c12d92dd48244de455c803d72f86d737 284 SUPERFAMILY SSF103481 37 136 2.09E-12 T 28-03-2018 AL504_RS10980 c12d92dd48244de455c803d72f86d737 284 Pfam PF00892 EamA-like transporter family 142 273 3.2E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS10980 c12d92dd48244de455c803d72f86d737 284 Pfam PF00892 EamA-like transporter family 3 132 2.5E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS10980 c12d92dd48244de455c803d72f86d737 284 SUPERFAMILY SSF103481 198 279 5.62E-9 T 28-03-2018 AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 PRINTS PR00412 Epoxide hydrolase signature 321 343 2.4E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 PRINTS PR00412 Epoxide hydrolase signature 80 98 2.4E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 PRINTS PR00412 Epoxide hydrolase signature 162 175 2.4E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 PRINTS PR00412 Epoxide hydrolase signature 100 115 2.4E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 PRINTS PR00412 Epoxide hydrolase signature 148 161 2.4E-13 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 SUPERFAMILY SSF53474 54 342 3.94E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 Gene3D G3DSA:3.40.50.1820 53 344 1.1E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS28890 98b6b7bcbf55a6a607b368f348a4703e 346 Pfam PF00561 alpha/beta hydrolase fold 77 206 3.7E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS11390 a981e71b6c88ec13487431486711e6fa 313 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 311 1.8E-126 T 28-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AL504_RS11390 a981e71b6c88ec13487431486711e6fa 313 Gene3D G3DSA:3.40.1190.20 1 310 8.2E-61 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS11390 a981e71b6c88ec13487431486711e6fa 313 Pfam PF00294 pfkB family carbohydrate kinase 13 301 4.8E-42 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL504_RS11390 a981e71b6c88ec13487431486711e6fa 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 52 75 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL504_RS11390 a981e71b6c88ec13487431486711e6fa 313 SUPERFAMILY SSF53613 13 309 3.12E-59 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS07025 55db76899fa07762da75a204a5e4d292 261 SUPERFAMILY SSF55681 84 251 3.87E-11 T 28-03-2018 AL504_RS07025 55db76899fa07762da75a204a5e4d292 261 Gene3D G3DSA:3.30.930.10 24 256 1.2E-12 T 28-03-2018 AL504_RS16290 e4db4b0bce425348120d1d7b47f993da 302 PIRSF PIRSF003097 2 302 5.2E-54 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AL504_RS16290 e4db4b0bce425348120d1d7b47f993da 302 Pfam PF02687 FtsX-like permease family 206 300 5.7E-6 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL504_RS05910 dde0c17a91c92cf743c67f519db91ede 296 Pfam PF00795 Carbon-nitrogen hydrolase 16 266 7.1E-53 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS05910 dde0c17a91c92cf743c67f519db91ede 296 SUPERFAMILY SSF56317 14 286 1.57E-76 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS05910 dde0c17a91c92cf743c67f519db91ede 296 Gene3D G3DSA:3.60.110.10 13 285 1.1E-80 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS28850 d65ccfdac3baf48848ef27524192113c 410 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 8 394 1.7E-118 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AL504_RS30090 2464c2f13e1077d32f64a381b3aef510 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 150 5.1E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30090 2464c2f13e1077d32f64a381b3aef510 694 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 692 6.8E-142 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS30090 2464c2f13e1077d32f64a381b3aef510 694 Gene3D G3DSA:2.40.170.20 159 694 1.7E-94 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS30090 2464c2f13e1077d32f64a381b3aef510 694 SUPERFAMILY SSF56935 16 693 7.06E-133 T 28-03-2018 AL504_RS30090 2464c2f13e1077d32f64a381b3aef510 694 Gene3D G3DSA:2.170.130.10 20 158 2.2E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30090 2464c2f13e1077d32f64a381b3aef510 694 Pfam PF00593 TonB dependent receptor 225 692 1.8E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS28575 b7674f842f234392ae27bedb0a70b45c 179 SMART SM00347 50 150 1.4E-4 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS28575 b7674f842f234392ae27bedb0a70b45c 179 Gene3D G3DSA:1.10.10.10 6 167 4.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28575 b7674f842f234392ae27bedb0a70b45c 179 Pfam PF12802 MarR family 56 113 7.3E-9 T 28-03-2018 AL504_RS28575 b7674f842f234392ae27bedb0a70b45c 179 SUPERFAMILY SSF46785 28 164 7.75E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05510 7b517addc248d489aa5db6cbf43733fa 381 Gene3D G3DSA:3.40.1710.10 46 201 1.6E-29 T 28-03-2018 AL504_RS05510 7b517addc248d489aa5db6cbf43733fa 381 Pfam PF12698 ABC-2 family transporter protein 33 373 1.1E-48 T 28-03-2018 AL504_RS27015 787ac5dc1509183d1d9d4ad2c778d243 318 SUPERFAMILY SSF51430 1 312 2.49E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS27015 787ac5dc1509183d1d9d4ad2c778d243 318 Pfam PF00248 Aldo/keto reductase family 15 311 4.1E-69 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS27015 787ac5dc1509183d1d9d4ad2c778d243 318 Gene3D G3DSA:3.20.20.100 1 317 1.4E-82 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS06740 56be96f024d009ab18c35fc4bce6211c 345 Gene3D G3DSA:3.90.180.10 2 151 1.3E-34 T 28-03-2018 AL504_RS06740 56be96f024d009ab18c35fc4bce6211c 345 SUPERFAMILY SSF51735 127 306 4.75E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06740 56be96f024d009ab18c35fc4bce6211c 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 116 6.6E-37 T 28-03-2018 AL504_RS06740 56be96f024d009ab18c35fc4bce6211c 345 SMART SM00829 19 339 7.8E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS06740 56be96f024d009ab18c35fc4bce6211c 345 SUPERFAMILY SSF50129 6 146 4.93E-40 T 28-03-2018 IPR011032 GroES-like AL504_RS06740 56be96f024d009ab18c35fc4bce6211c 345 Pfam PF00107 Zinc-binding dehydrogenase 161 295 7.0E-20 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS06740 56be96f024d009ab18c35fc4bce6211c 345 Gene3D G3DSA:3.40.50.720 152 282 2.4E-27 T 28-03-2018 AL504_RS01790 1411f02596a81c89b1dd20961db39434 213 SUPERFAMILY SSF52833 2 84 2.24E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS01790 1411f02596a81c89b1dd20961db39434 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 202 9.2E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS01790 1411f02596a81c89b1dd20961db39434 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 79 1.3E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS01790 1411f02596a81c89b1dd20961db39434 213 Gene3D G3DSA:3.40.30.10 1 95 1.8E-25 T 28-03-2018 AL504_RS01790 1411f02596a81c89b1dd20961db39434 213 Gene3D G3DSA:1.20.1050.10 96 208 3.3E-26 T 28-03-2018 AL504_RS01790 1411f02596a81c89b1dd20961db39434 213 SUPERFAMILY SSF47616 72 206 1.53E-29 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 SMART SM00862 159 235 1.2E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 Gene3D G3DSA:3.40.50.2300 6 134 2.8E-38 T 28-03-2018 AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 Pfam PF00072 Response regulator receiver domain 7 118 9.1E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 Gene3D G3DSA:1.10.10.10 135 241 3.0E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 SUPERFAMILY SSF46894 136 236 2.61E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 SMART SM00448 5 117 6.5E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 SUPERFAMILY SSF52172 4 134 4.13E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS27435 344c6be23c64e7af2db0c7da93aa5f8d 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 9.0E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS24245 74108b9eb65bbcd3ac105709b3a7be56 396 Pfam PF07690 Major Facilitator Superfamily 14 349 1.5E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS24245 74108b9eb65bbcd3ac105709b3a7be56 396 SUPERFAMILY SSF103473 4 394 1.28E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24245 74108b9eb65bbcd3ac105709b3a7be56 396 Gene3D G3DSA:1.20.1250.20 203 396 6.5E-12 T 28-03-2018 AL504_RS24245 74108b9eb65bbcd3ac105709b3a7be56 396 Gene3D G3DSA:1.20.1250.20 2 202 1.8E-12 T 28-03-2018 AL504_RS21235 eeb62ce132d0fb59784c5275dab7ba17 338 SUPERFAMILY SSF53850 24 257 2.12E-48 T 28-03-2018 AL504_RS21235 eeb62ce132d0fb59784c5275dab7ba17 338 SMART SM00062 33 263 3.3E-48 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS21235 eeb62ce132d0fb59784c5275dab7ba17 338 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 253 1.6E-31 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS21235 eeb62ce132d0fb59784c5275dab7ba17 338 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS21235 eeb62ce132d0fb59784c5275dab7ba17 338 Gene3D G3DSA:3.40.190.10 23 137 3.2E-19 T 28-03-2018 AL504_RS21235 eeb62ce132d0fb59784c5275dab7ba17 338 Gene3D G3DSA:3.40.190.10 138 226 2.8E-15 T 28-03-2018 AL504_RS27760 ff35fc4d66b0b9c9a134399716cd5725 374 Pfam PF06804 NlpB/DapX lipoprotein 40 372 6.5E-47 T 28-03-2018 IPR010653 NlpB/DapX lipoprotein AL504_RS10525 76cf0f3fa2c68a59eabcc594fecf44fe 499 SUPERFAMILY SSF56176 19 231 4.44E-68 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS10525 76cf0f3fa2c68a59eabcc594fecf44fe 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 471 2.2E-66 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS10525 76cf0f3fa2c68a59eabcc594fecf44fe 499 Gene3D G3DSA:3.30.43.10 5 108 1.2E-22 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS10525 76cf0f3fa2c68a59eabcc594fecf44fe 499 Gene3D G3DSA:3.30.465.10 109 253 5.5E-38 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS10525 76cf0f3fa2c68a59eabcc594fecf44fe 499 Gene3D G3DSA:1.10.45.10 432 471 5.4E-10 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL504_RS10525 76cf0f3fa2c68a59eabcc594fecf44fe 499 Pfam PF01565 FAD binding domain 56 195 1.0E-38 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS10525 76cf0f3fa2c68a59eabcc594fecf44fe 499 SUPERFAMILY SSF55103 205 474 7.85E-74 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS26040 f6867b79b04967e7ae111fca9dec7af5 349 PIRSF PIRSF004930 1 345 1.9E-92 T 28-03-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AL504_RS26040 f6867b79b04967e7ae111fca9dec7af5 349 SUPERFAMILY SSF55821 11 219 6.71E-52 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS26040 f6867b79b04967e7ae111fca9dec7af5 349 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 219 1.8E-47 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL504_RS26040 f6867b79b04967e7ae111fca9dec7af5 349 Gene3D G3DSA:3.90.870.10 1 224 2.6E-69 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL504_RS26040 f6867b79b04967e7ae111fca9dec7af5 349 Pfam PF03481 Putative GTP-binding controlling metal-binding 210 340 2.5E-19 T 28-03-2018 IPR005145 Putative GTP-binding controlling metal-binding domain AL504_RS26040 f6867b79b04967e7ae111fca9dec7af5 349 Pfam PF01300 Telomere recombination 20 208 1.9E-46 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL504_RS03995 5ed8d0dab6808b062d1187e9997e1f4d 334 SUPERFAMILY SSF53850 122 293 8.15E-11 T 28-03-2018 AL504_RS03995 5ed8d0dab6808b062d1187e9997e1f4d 334 Gene3D G3DSA:3.40.190.10 133 244 3.4E-13 T 28-03-2018 AL504_RS03995 5ed8d0dab6808b062d1187e9997e1f4d 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 330 4.6E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03995 5ed8d0dab6808b062d1187e9997e1f4d 334 PIRSF PIRSF017082 1 334 4.1E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10590 3bc5525106475faea5443afd4b148f4f 154 SUPERFAMILY SSF52833 2 153 1.79E-47 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS10590 3bc5525106475faea5443afd4b148f4f 154 PIRSF PIRSF000239 1 153 3.3E-29 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS10590 3bc5525106475faea5443afd4b148f4f 154 Pfam PF00578 AhpC/TSA family 5 131 2.9E-33 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS10590 3bc5525106475faea5443afd4b148f4f 154 Gene3D G3DSA:3.40.30.10 2 153 3.6E-33 T 28-03-2018 AL504_RS15890 9acd16d7881a2839c228003b5e0a5604 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS15890 9acd16d7881a2839c228003b5e0a5604 275 Gene3D G3DSA:3.40.190.10 150 267 2.0E-13 T 28-03-2018 AL504_RS15890 9acd16d7881a2839c228003b5e0a5604 275 Gene3D G3DSA:3.40.190.10 30 149 9.2E-30 T 28-03-2018 AL504_RS15890 9acd16d7881a2839c228003b5e0a5604 275 SMART SM00062 35 259 3.7E-49 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS15890 9acd16d7881a2839c228003b5e0a5604 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 257 4.6E-52 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS15890 9acd16d7881a2839c228003b5e0a5604 275 SUPERFAMILY SSF53850 1 258 8.69E-57 T 28-03-2018 AL504_RS11265 fe7e11bd0a47c0eec28ebfa83494be15 290 SUPERFAMILY SSF103481 39 141 7.98E-13 T 28-03-2018 AL504_RS11265 fe7e11bd0a47c0eec28ebfa83494be15 290 SUPERFAMILY SSF103481 209 287 4.05E-9 T 28-03-2018 AL504_RS11265 fe7e11bd0a47c0eec28ebfa83494be15 290 Pfam PF00892 EamA-like transporter family 153 287 3.0E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS19050 15b70de1f891997c1964b7c76361ba27 218 Gene3D G3DSA:1.10.10.60 1 66 2.8E-22 T 28-03-2018 AL504_RS19050 15b70de1f891997c1964b7c76361ba27 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS19050 15b70de1f891997c1964b7c76361ba27 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS19050 15b70de1f891997c1964b7c76361ba27 218 SUPERFAMILY SSF46689 9 89 1.57E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS19050 15b70de1f891997c1964b7c76361ba27 218 Gene3D G3DSA:1.10.357.10 67 208 1.4E-15 T 28-03-2018 AL504_RS19050 15b70de1f891997c1964b7c76361ba27 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.2E-17 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS23915 84c301a8e9092f9dd69f7313dc69c240 261 SUPERFAMILY SSF53474 6 251 5.13E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23915 84c301a8e9092f9dd69f7313dc69c240 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 36 51 1.4E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS23915 84c301a8e9092f9dd69f7313dc69c240 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 1.4E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS23915 84c301a8e9092f9dd69f7313dc69c240 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 1.4E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS23915 84c301a8e9092f9dd69f7313dc69c240 261 Gene3D G3DSA:3.40.50.1820 2 255 7.2E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23915 84c301a8e9092f9dd69f7313dc69c240 261 Pfam PF12146 Serine aminopeptidase, S33 13 238 2.4E-22 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS06430 1a1c1f1c9fc9e302b3e5abb13709945b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 3.4E-108 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AL504_RS06430 1a1c1f1c9fc9e302b3e5abb13709945b 261 Pfam PF00460 Flagella basal body rod protein 5 35 3.8E-11 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL504_RS06430 1a1c1f1c9fc9e302b3e5abb13709945b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 261 4.7E-25 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL504_RS06430 1a1c1f1c9fc9e302b3e5abb13709945b 261 SUPERFAMILY SSF117143 93 223 4.45E-34 T 28-03-2018 AL504_RS06430 1a1c1f1c9fc9e302b3e5abb13709945b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL504_RS06430 1a1c1f1c9fc9e302b3e5abb13709945b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 244 3.7E-30 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL504_RS06430 1a1c1f1c9fc9e302b3e5abb13709945b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 5.2E-43 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL504_RS11160 b1dfff7fddd738653b32227d6515e14f 209 TIGRFAM TIGR03035 trp_arylform: arylformamidase 3 208 4.1E-99 T 28-03-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS11160 b1dfff7fddd738653b32227d6515e14f 209 SUPERFAMILY SSF102198 2 206 4.45E-56 T 28-03-2018 AL504_RS11160 b1dfff7fddd738653b32227d6515e14f 209 Hamap MF_01969 Kynurenine formamidase [kynB]. 3 208 43.881 T 28-03-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS11160 b1dfff7fddd738653b32227d6515e14f 209 Pfam PF04199 Putative cyclase 6 151 1.4E-17 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS11160 b1dfff7fddd738653b32227d6515e14f 209 Gene3D G3DSA:3.50.30.50 1 207 3.4E-46 T 28-03-2018 AL504_RS17495 4c1134fc6d6857f3ef540df7c31bac7b 472 PIRSF PIRSF002744 1 468 4.8E-100 T 28-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 AL504_RS17495 4c1134fc6d6857f3ef540df7c31bac7b 472 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 442 2.7E-52 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 Gene3D G3DSA:2.60.120.10 18 161 6.6E-8 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 Pfam PF02311 AraC-like ligand binding domain 26 137 3.8E-11 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 Gene3D G3DSA:1.10.10.60 162 211 1.1E-9 T 28-03-2018 AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 Pfam PF12833 Helix-turn-helix domain 181 256 3.8E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 SUPERFAMILY SSF51182 30 182 4.89E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 SMART SM00342 173 255 1.9E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 SUPERFAMILY SSF46689 210 257 9.41E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS24600 dae58a3a758923919e8a307a5e28ac25 262 Gene3D G3DSA:1.10.10.60 212 260 1.6E-9 T 28-03-2018 AL504_RS21770 e33b263c6b32d660ff9f784d4424c7f1 254 Gene3D G3DSA:3.40.50.300 1 252 7.2E-59 T 28-03-2018 AL504_RS21770 e33b263c6b32d660ff9f784d4424c7f1 254 Pfam PF00005 ABC transporter 23 176 4.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21770 e33b263c6b32d660ff9f784d4424c7f1 254 SUPERFAMILY SSF52540 5 248 2.39E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21770 e33b263c6b32d660ff9f784d4424c7f1 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 3.5E-14 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS21770 e33b263c6b32d660ff9f784d4424c7f1 254 SMART SM00382 31 226 6.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS29720 322729399ef466e373f43eb64ccad441 249 Gene3D G3DSA:3.40.50.1820 2 246 5.4E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29720 322729399ef466e373f43eb64ccad441 249 Pfam PF12697 Alpha/beta hydrolase family 10 239 3.0E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS29720 322729399ef466e373f43eb64ccad441 249 SUPERFAMILY SSF53474 5 244 4.4E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 Gene3D G3DSA:2.40.50.140 292 341 1.7E-13 T 28-03-2018 AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 Pfam PF00005 ABC transporter 21 162 8.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 Gene3D G3DSA:2.40.50.100 240 291 4.6E-8 T 28-03-2018 AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 Pfam PF08402 TOBE domain 280 346 6.0E-9 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 SUPERFAMILY SSF50331 237 359 4.37E-23 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 SMART SM00382 29 212 9.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 Gene3D G3DSA:3.40.50.300 1 239 3.2E-72 T 28-03-2018 AL504_RS04625 6149a91e3262cc66314c940e0bd89606 362 SUPERFAMILY SSF52540 4 244 2.37E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04230 199a1c71166021ccc8a9f11e31d369d8 304 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 234 299 9.9E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04230 199a1c71166021ccc8a9f11e31d369d8 304 Pfam PF00034 Cytochrome c 126 201 2.7E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04230 199a1c71166021ccc8a9f11e31d369d8 304 SUPERFAMILY SSF46626 219 302 1.53E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04230 199a1c71166021ccc8a9f11e31d369d8 304 Gene3D G3DSA:1.10.760.10 104 204 5.7E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04230 199a1c71166021ccc8a9f11e31d369d8 304 Gene3D G3DSA:1.10.760.10 212 303 4.3E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS04230 199a1c71166021ccc8a9f11e31d369d8 304 SUPERFAMILY SSF46626 117 203 1.06E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS05750 88392ff476c2a8de3def6a74bcf2c1dd 226 Gene3D G3DSA:3.50.30.40 22 197 1.7E-51 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS05750 88392ff476c2a8de3def6a74bcf2c1dd 226 Pfam PF03737 Aldolase/RraA 30 177 4.9E-43 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS05750 88392ff476c2a8de3def6a74bcf2c1dd 226 SUPERFAMILY SSF89562 27 187 1.57E-44 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS18655 3e01270d1fd5e91159f716f7be79cc65 355 Pfam PF00753 Metallo-beta-lactamase superfamily 42 267 2.4E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS18655 3e01270d1fd5e91159f716f7be79cc65 355 SUPERFAMILY SSF56281 15 352 3.8E-70 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS18655 3e01270d1fd5e91159f716f7be79cc65 355 SMART SM00849 42 267 2.7E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS18655 3e01270d1fd5e91159f716f7be79cc65 355 Gene3D G3DSA:3.60.15.10 17 289 2.8E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS27400 b56e06f7ad029a40a588c74137c414c0 327 SUPERFAMILY SSF52540 8 255 9.52E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27400 b56e06f7ad029a40a588c74137c414c0 327 SMART SM00382 36 235 4.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS27400 b56e06f7ad029a40a588c74137c414c0 327 Gene3D G3DSA:3.40.50.300 4 322 2.0E-76 T 28-03-2018 AL504_RS27400 b56e06f7ad029a40a588c74137c414c0 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 5.2E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS27400 b56e06f7ad029a40a588c74137c414c0 327 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS27400 b56e06f7ad029a40a588c74137c414c0 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 319 1.6E-24 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS27400 b56e06f7ad029a40a588c74137c414c0 327 Pfam PF00005 ABC transporter 28 185 8.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS14035 930f8d4ae887a596072eb45fefb1fe09 157 SUPERFAMILY SSF54427 2 157 3.0E-46 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS14035 930f8d4ae887a596072eb45fefb1fe09 157 Gene3D G3DSA:3.10.450.50 3 156 6.0E-28 T 28-03-2018 AL504_RS14035 930f8d4ae887a596072eb45fefb1fe09 157 Pfam PF00866 Ring hydroxylating beta subunit 18 150 4.4E-12 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AL504_RS29900 6f6b446ff919fe67de0dfdf2ba8423db 497 Gene3D G3DSA:1.20.1250.20 1 196 5.8E-33 T 28-03-2018 AL504_RS29900 6f6b446ff919fe67de0dfdf2ba8423db 497 SUPERFAMILY SSF103473 1 199 2.7E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS29900 6f6b446ff919fe67de0dfdf2ba8423db 497 SUPERFAMILY SSF103473 245 415 2.7E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS29900 6f6b446ff919fe67de0dfdf2ba8423db 497 SUPERFAMILY SSF103473 463 491 2.7E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS29900 6f6b446ff919fe67de0dfdf2ba8423db 497 Gene3D G3DSA:1.20.1250.20 248 496 1.6E-26 T 28-03-2018 AL504_RS29900 6f6b446ff919fe67de0dfdf2ba8423db 497 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 9 460 2.2E-75 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS29900 6f6b446ff919fe67de0dfdf2ba8423db 497 Pfam PF07690 Major Facilitator Superfamily 15 405 7.8E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS19055 179643bf27c724ccdfc0d817f5572b8c 165 Gene3D G3DSA:3.40.50.450 1 165 7.6E-38 T 28-03-2018 AL504_RS19055 179643bf27c724ccdfc0d817f5572b8c 165 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 143 5.6E-45 T 28-03-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 Reactome: R-HSA-74259 AL504_RS19055 179643bf27c724ccdfc0d817f5572b8c 165 SUPERFAMILY SSF52309 1 161 6.1E-46 T 28-03-2018 AL504_RS29820 e0628f7b08fab1e4650c62e64c8ecb05 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 213 1.1E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29820 e0628f7b08fab1e4650c62e64c8ecb05 218 Gene3D G3DSA:1.10.3720.10 1 217 2.2E-40 T 28-03-2018 AL504_RS29820 e0628f7b08fab1e4650c62e64c8ecb05 218 SUPERFAMILY SSF161098 9 207 3.92E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04415 d7122d48521dba26a8a1a828baf8a5dd 541 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 22 120 2.6E-23 T 28-03-2018 IPR025554 Domain of unknown function DUF4140 AL504_RS04415 d7122d48521dba26a8a1a828baf8a5dd 541 Pfam PF13598 Domain of unknown function (DUF4139) 210 533 5.9E-64 T 28-03-2018 IPR011935 Conserved hypothetical protein CHP02231 AL504_RS04415 d7122d48521dba26a8a1a828baf8a5dd 541 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 19 538 2.1E-147 T 28-03-2018 IPR011935 Conserved hypothetical protein CHP02231 AL504_RS04415 d7122d48521dba26a8a1a828baf8a5dd 541 Gene3D G3DSA:1.20.5.340 76 346 2.5E-7 T 28-03-2018 AL504_RS04415 d7122d48521dba26a8a1a828baf8a5dd 541 Gene3D G3DSA:2.60.40.10 453 539 0.25 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS00360 6cc4bb913bb9783a8b34a5357ee6f34e 424 Gene3D G3DSA:1.20.1250.20 189 407 1.8E-23 T 28-03-2018 AL504_RS00360 6cc4bb913bb9783a8b34a5357ee6f34e 424 SUPERFAMILY SSF103473 2 399 1.57E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS00360 6cc4bb913bb9783a8b34a5357ee6f34e 424 Pfam PF07690 Major Facilitator Superfamily 4 308 1.6E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS00360 6cc4bb913bb9783a8b34a5357ee6f34e 424 Gene3D G3DSA:1.20.1250.20 1 188 4.7E-23 T 28-03-2018 AL504_RS29710 bb529ff0b0fd8f7c11c2759850d16861 231 Pfam PF07302 AroM protein 7 227 2.7E-80 T 28-03-2018 IPR010843 Uncharacterised protein family AroM AL504_RS29710 bb529ff0b0fd8f7c11c2759850d16861 231 Gene3D G3DSA:3.40.50.1860 148 228 4.5E-4 T 28-03-2018 AL504_RS29710 bb529ff0b0fd8f7c11c2759850d16861 231 Gene3D G3DSA:3.40.50.1860 58 147 0.0012 T 28-03-2018 AL504_RS29710 bb529ff0b0fd8f7c11c2759850d16861 231 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 7 226 6.0E-36 T 28-03-2018 IPR010843 Uncharacterised protein family AroM AL504_RS23755 2c98e779b91c18cfd1cb9d7bceca985a 424 Gene3D G3DSA:3.40.50.150 130 409 4.8E-63 T 28-03-2018 AL504_RS23755 2c98e779b91c18cfd1cb9d7bceca985a 424 PIRSF PIRSF003085 22 423 4.5E-118 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL504_RS23755 2c98e779b91c18cfd1cb9d7bceca985a 424 SUPERFAMILY SSF53335 25 363 2.34E-77 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS23755 2c98e779b91c18cfd1cb9d7bceca985a 424 Pfam PF02353 Mycolic acid cyclopropane synthetase 137 404 1.0E-80 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS16020 bca56599f3d9a2e98ba8030c4f34228b 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 33 284 1.5E-39 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS16020 bca56599f3d9a2e98ba8030c4f34228b 285 Gene3D G3DSA:1.10.12.10 243 285 1.8E-12 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS16020 bca56599f3d9a2e98ba8030c4f34228b 285 Gene3D G3DSA:3.90.226.10 28 242 1.1E-56 T 28-03-2018 AL504_RS16020 bca56599f3d9a2e98ba8030c4f34228b 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 125 145 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL504_RS16020 bca56599f3d9a2e98ba8030c4f34228b 285 SUPERFAMILY SSF52096 25 284 9.23E-73 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS04570 7148fe7099c7198015498f133827adac 247 Gene3D G3DSA:3.40.50.1860 125 223 7.0E-21 T 28-03-2018 AL504_RS04570 7148fe7099c7198015498f133827adac 247 TIGRFAM TIGR00035 asp_race: aspartate racemase 10 232 9.9E-45 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AL504_RS04570 7148fe7099c7198015498f133827adac 247 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 85 93 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS04570 7148fe7099c7198015498f133827adac 247 Gene3D G3DSA:3.40.50.1860 8 124 4.0E-33 T 28-03-2018 AL504_RS04570 7148fe7099c7198015498f133827adac 247 SUPERFAMILY SSF53681 10 121 8.99E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS04570 7148fe7099c7198015498f133827adac 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 13 232 2.8E-59 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS04570 7148fe7099c7198015498f133827adac 247 SUPERFAMILY SSF53681 125 235 1.08E-23 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS29945 d81ea7a4ccb2acbd0cafa6e14fc3b8c3 211 Gene3D G3DSA:3.40.50.150 11 202 1.7E-21 T 28-03-2018 AL504_RS29945 d81ea7a4ccb2acbd0cafa6e14fc3b8c3 211 Pfam PF13649 Methyltransferase domain 57 150 2.0E-11 T 28-03-2018 AL504_RS29945 d81ea7a4ccb2acbd0cafa6e14fc3b8c3 211 SUPERFAMILY SSF53335 32 202 3.25E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS20150 a7d9c06f028276b8afbdf3ea7bd5151a 101 Pfam PF13663 Domain of unknown function (DUF4148) 1 60 8.4E-13 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS20150 a7d9c06f028276b8afbdf3ea7bd5151a 101 Pfam PF13663 Domain of unknown function (DUF4148) 61 97 5.8E-10 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS20720 85d1887ea3d749ef185dbedb0902e0dc 715 Pfam PF14718 Soluble lytic murein transglycosylase L domain 469 528 4.3E-9 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL504_RS20720 85d1887ea3d749ef185dbedb0902e0dc 715 Gene3D G3DSA:1.25.20.10 94 450 4.5E-29 T 28-03-2018 AL504_RS20720 85d1887ea3d749ef185dbedb0902e0dc 715 Pfam PF01464 Transglycosylase SLT domain 548 653 5.3E-21 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL504_RS20720 85d1887ea3d749ef185dbedb0902e0dc 715 Gene3D G3DSA:1.10.530.10 529 697 7.6E-31 T 28-03-2018 AL504_RS20720 85d1887ea3d749ef185dbedb0902e0dc 715 Gene3D G3DSA:1.10.1240.20 466 528 1.5E-22 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL504_RS20720 85d1887ea3d749ef185dbedb0902e0dc 715 SUPERFAMILY SSF53955 545 702 2.14E-43 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS20720 85d1887ea3d749ef185dbedb0902e0dc 715 SUPERFAMILY SSF48435 97 538 3.14E-99 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AL504_RS17570 914fcac46f66578646d4a70852ba58f4 343 SUPERFAMILY SSF53448 5 223 3.87E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS17570 914fcac46f66578646d4a70852ba58f4 343 Gene3D G3DSA:3.90.550.10 2 242 5.1E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS17570 914fcac46f66578646d4a70852ba58f4 343 Pfam PF00535 Glycosyl transferase family 2 21 183 9.3E-33 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 SUPERFAMILY SSF52283 184 231 4.31E-111 T 28-03-2018 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 SUPERFAMILY SSF52283 392 472 4.31E-111 T 28-03-2018 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 SUPERFAMILY SSF52283 9 148 4.31E-111 T 28-03-2018 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 SMART SM00997 232 391 1.7E-112 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 PIRSF PIRSF001109 1 472 7.7E-188 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 Gene3D G3DSA:3.40.50.1480 249 445 8.7E-83 T 28-03-2018 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 Gene3D G3DSA:3.40.50.1480 2 248 3.3E-89 T 28-03-2018 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 254 270 - T 28-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 SUPERFAMILY SSF51735 232 391 1.6E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 11 471 2.3E-144 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 7 464 48.31 T 28-03-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 SMART SM00996 11 471 0.0 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 232 391 1.3E-80 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 12 464 9.6E-184 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS20670 826650010ea338f9f7fd92108be2b4b2 472 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 83 97 - T 28-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AL504_RS09925 3f53a16d65b04c1182984887f0b20bc4 431 SUPERFAMILY SSF52540 6 240 5.17E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09925 3f53a16d65b04c1182984887f0b20bc4 431 Pfam PF09821 C-terminal AAA-associated domain 299 417 1.9E-37 T 28-03-2018 IPR018632 C-terminal AAA-associated domain AL504_RS09925 3f53a16d65b04c1182984887f0b20bc4 431 SMART SM00382 36 220 1.6E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS09925 3f53a16d65b04c1182984887f0b20bc4 431 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS09925 3f53a16d65b04c1182984887f0b20bc4 431 Gene3D G3DSA:3.40.50.300 3 229 8.0E-58 T 28-03-2018 AL504_RS09925 3f53a16d65b04c1182984887f0b20bc4 431 Pfam PF00005 ABC transporter 27 166 5.4E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03435 97b5bae3dc6563a6da925b96bc451e6b 304 Pfam PF00701 Dihydrodipicolinate synthetase family 13 299 6.9E-54 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS03435 97b5bae3dc6563a6da925b96bc451e6b 304 PIRSF PIRSF001365 7 304 4.0E-59 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS03435 97b5bae3dc6563a6da925b96bc451e6b 304 Gene3D G3DSA:3.20.20.70 5 303 3.3E-71 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS03435 97b5bae3dc6563a6da925b96bc451e6b 304 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 11 302 44.463 T 28-03-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AL504_RS03435 97b5bae3dc6563a6da925b96bc451e6b 304 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 4 301 3.2E-135 T 28-03-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AL504_RS03435 97b5bae3dc6563a6da925b96bc451e6b 304 SUPERFAMILY SSF51569 13 302 1.99E-68 T 28-03-2018 AL504_RS03435 97b5bae3dc6563a6da925b96bc451e6b 304 SMART SM01130 11 302 4.6E-78 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS03425 97b5bae3dc6563a6da925b96bc451e6b 304 Pfam PF00701 Dihydrodipicolinate synthetase family 13 299 6.9E-54 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS03425 97b5bae3dc6563a6da925b96bc451e6b 304 PIRSF PIRSF001365 7 304 4.0E-59 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS03425 97b5bae3dc6563a6da925b96bc451e6b 304 Gene3D G3DSA:3.20.20.70 5 303 3.3E-71 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS03425 97b5bae3dc6563a6da925b96bc451e6b 304 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 11 302 44.463 T 28-03-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AL504_RS03425 97b5bae3dc6563a6da925b96bc451e6b 304 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 4 301 3.2E-135 T 28-03-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AL504_RS03425 97b5bae3dc6563a6da925b96bc451e6b 304 SUPERFAMILY SSF51569 13 302 1.99E-68 T 28-03-2018 AL504_RS03425 97b5bae3dc6563a6da925b96bc451e6b 304 SMART SM01130 11 302 4.6E-78 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS02105 40d2e43dd47584096166af9a53971445 253 SUPERFAMILY SSF48371 61 251 2.97E-35 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 AL504_RS02105 40d2e43dd47584096166af9a53971445 253 Gene3D G3DSA:1.25.40.290 144 253 1.1E-16 T 28-03-2018 AL504_RS01220 47b3cd34b6db503d0c5b07625f948291 163 Gene3D G3DSA:3.10.450.50 31 157 7.2E-17 T 28-03-2018 AL504_RS01220 47b3cd34b6db503d0c5b07625f948291 163 Pfam PF13474 SnoaL-like domain 38 154 1.1E-5 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS01220 47b3cd34b6db503d0c5b07625f948291 163 SUPERFAMILY SSF54427 32 154 1.82E-16 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS19275 5f095ccc5b3affe33336cc7966bdf70f 244 SMART SM00382 26 213 2.7E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19275 5f095ccc5b3affe33336cc7966bdf70f 244 Pfam PF00005 ABC transporter 17 165 2.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19275 5f095ccc5b3affe33336cc7966bdf70f 244 SUPERFAMILY SSF52540 1 226 1.96E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19275 5f095ccc5b3affe33336cc7966bdf70f 244 PIRSF PIRSF039085 1 243 2.0E-98 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS19275 5f095ccc5b3affe33336cc7966bdf70f 244 Gene3D G3DSA:3.40.50.300 1 239 7.8E-69 T 28-03-2018 AL504_RS19275 5f095ccc5b3affe33336cc7966bdf70f 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS00470 3793db573413431b5bdda20d6bc34156 311 Pfam PF12697 Alpha/beta hydrolase family 38 306 2.6E-16 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS00470 3793db573413431b5bdda20d6bc34156 311 SUPERFAMILY SSF53474 15 304 3.62E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00470 3793db573413431b5bdda20d6bc34156 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 2.1E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS00470 3793db573413431b5bdda20d6bc34156 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 2.1E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS00470 3793db573413431b5bdda20d6bc34156 311 Gene3D G3DSA:3.40.50.1820 7 310 1.2E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 Gene3D G3DSA:3.40.50.2300 28 218 1.1E-46 T 28-03-2018 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 Gene3D G3DSA:3.40.50.2300 219 358 2.5E-19 T 28-03-2018 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 Pfam PF13458 Periplasmic binding protein 30 366 1.2E-61 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 SUPERFAMILY SSF53822 30 370 2.62E-93 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 3.5E-34 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 296 3.5E-34 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 93 103 3.5E-34 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 3.5E-34 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 335 350 3.5E-34 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 3.5E-34 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS04650 f01c6688e536f7dfa2bb938ab4700d55 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 3.5E-34 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS30115 e1a34c1146134041cfb14c3fad3abc7c 339 SMART SM00829 13 335 4.5E-28 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS30115 e1a34c1146134041cfb14c3fad3abc7c 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 128 3.9E-10 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS30115 e1a34c1146134041cfb14c3fad3abc7c 339 Pfam PF00107 Zinc-binding dehydrogenase 171 298 1.5E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS30115 e1a34c1146134041cfb14c3fad3abc7c 339 SUPERFAMILY SSF50129 1 160 7.61E-36 T 28-03-2018 IPR011032 GroES-like AL504_RS30115 e1a34c1146134041cfb14c3fad3abc7c 339 Gene3D G3DSA:3.90.180.10 1 338 9.6E-79 T 28-03-2018 AL504_RS30115 e1a34c1146134041cfb14c3fad3abc7c 339 SUPERFAMILY SSF51735 133 308 2.11E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06590 2c70e92233e49a36abd7effc9d885dce 407 Pfam PF08421 Putative zinc binding domain 3 64 5.6E-19 T 28-03-2018 IPR013630 Methyltransferase putative zinc binding domain AL504_RS06590 2c70e92233e49a36abd7effc9d885dce 407 Pfam PF13489 Methyltransferase domain 80 238 4.1E-9 T 28-03-2018 AL504_RS06590 2c70e92233e49a36abd7effc9d885dce 407 Pfam PF08484 C-methyltransferase C-terminal domain 245 402 1.5E-63 T 28-03-2018 IPR013691 C-methyltransferase AL504_RS06590 2c70e92233e49a36abd7effc9d885dce 407 SUPERFAMILY SSF53335 61 252 1.21E-16 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS06590 2c70e92233e49a36abd7effc9d885dce 407 Gene3D G3DSA:3.40.50.150 55 256 4.2E-24 T 28-03-2018 AL504_RS02440 c446742f2bada4f901c12a8d15cea9f7 412 Pfam PF07690 Major Facilitator Superfamily 36 368 3.8E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS02440 c446742f2bada4f901c12a8d15cea9f7 412 SUPERFAMILY SSF103473 32 408 8.89E-27 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS02440 c446742f2bada4f901c12a8d15cea9f7 412 Gene3D G3DSA:1.20.1250.20 17 213 5.1E-18 T 28-03-2018 AL504_RS02440 c446742f2bada4f901c12a8d15cea9f7 412 Gene3D G3DSA:1.20.1250.20 220 411 3.2E-9 T 28-03-2018 AL504_RS17320 fbd064fef8f38d81564a28ff3b612caa 197 SUPERFAMILY SSF52218 1 169 1.64E-34 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS17320 fbd064fef8f38d81564a28ff3b612caa 197 Pfam PF03358 NADPH-dependent FMN reductase 1 142 3.3E-33 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL504_RS17320 fbd064fef8f38d81564a28ff3b612caa 197 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 3 171 4.6E-69 T 28-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AL504_RS17320 fbd064fef8f38d81564a28ff3b612caa 197 Gene3D G3DSA:3.40.50.360 1 177 3.4E-34 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS24900 074b8aa3a6c81190ad09a764b31026ff 178 SUPERFAMILY SSF55729 12 176 1.31E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS24900 074b8aa3a6c81190ad09a764b31026ff 178 Gene3D G3DSA:3.40.630.30 3 178 2.6E-32 T 28-03-2018 AL504_RS24900 074b8aa3a6c81190ad09a764b31026ff 178 Pfam PF13673 Acetyltransferase (GNAT) domain 61 154 2.1E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS03475 c05292a05d9c93035eff10c98e6b0a53 237 Pfam PF00117 Glutamine amidotransferase class-I 76 197 1.0E-16 T 28-03-2018 IPR017926 Glutamine amidotransferase AL504_RS03475 c05292a05d9c93035eff10c98e6b0a53 237 SUPERFAMILY SSF52317 47 234 4.14E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS03475 c05292a05d9c93035eff10c98e6b0a53 237 PRINTS PR00096 Glutamine amidotransferase superfamily signature 183 196 4.7E-5 T 28-03-2018 AL504_RS03475 c05292a05d9c93035eff10c98e6b0a53 237 PRINTS PR00096 Glutamine amidotransferase superfamily signature 92 103 4.7E-5 T 28-03-2018 AL504_RS03475 c05292a05d9c93035eff10c98e6b0a53 237 Gene3D G3DSA:3.40.50.880 19 234 1.0E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS16225 1f004cbd3bec7420f45dc80f60bfbcb1 132 Gene3D G3DSA:1.20.59.10 26 130 5.9E-21 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS16225 1f004cbd3bec7420f45dc80f60bfbcb1 132 Pfam PF01817 Chorismate mutase type II 37 118 8.6E-14 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS16225 1f004cbd3bec7420f45dc80f60bfbcb1 132 SMART SM00830 37 120 9.6E-17 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS16225 1f004cbd3bec7420f45dc80f60bfbcb1 132 PIRSF PIRSF029775 21 127 3.8E-32 T 28-03-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS16225 1f004cbd3bec7420f45dc80f60bfbcb1 132 SUPERFAMILY SSF48600 28 120 2.75E-18 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 SUPERFAMILY SSF50249 413 529 7.42E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 Gene3D G3DSA:3.30.1490.70 350 400 4.9E-15 T 28-03-2018 AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 227 527 5.8E-103 T 28-03-2018 IPR014146 DNA ligase D, ligase domain AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 5 160 6.4E-68 T 28-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 Pfam PF01068 ATP dependent DNA ligase domain 229 410 4.8E-22 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 242 866 8.2E-199 T 28-03-2018 IPR014143 DNA ligase D AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 596 838 9.6E-83 T 28-03-2018 IPR014145 DNA ligase D, polymerase domain AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 Gene3D G3DSA:2.40.50.140 401 523 1.5E-33 T 28-03-2018 AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 Pfam PF04679 ATP dependent DNA ligase C terminal region 431 521 1.3E-24 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 SUPERFAMILY SSF56091 224 410 7.91E-46 T 28-03-2018 AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 Gene3D G3DSA:3.30.470.30 199 349 4.9E-32 T 28-03-2018 AL504_RS29025 8c6be8c6cde1c5e7a6d819e558cdb769 883 Pfam PF13298 DNA polymerase Ligase (LigD) 36 140 2.5E-38 T 28-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain AL504_RS13610 539547314d26caeb42109f2f9171de26 127 Pfam PF00085 Thioredoxin 22 86 5.9E-9 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL504_RS13610 539547314d26caeb42109f2f9171de26 127 SUPERFAMILY SSF52833 22 93 5.31E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS13610 539547314d26caeb42109f2f9171de26 127 Gene3D G3DSA:3.40.30.10 8 109 1.2E-12 T 28-03-2018 AL504_RS21345 434b4f94a6ed6a9f36bdf4c25ee0c9a1 310 Gene3D G3DSA:3.40.50.150 37 293 8.5E-28 T 28-03-2018 AL504_RS21345 434b4f94a6ed6a9f36bdf4c25ee0c9a1 310 SUPERFAMILY SSF53335 39 237 1.01E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS21345 434b4f94a6ed6a9f36bdf4c25ee0c9a1 310 Pfam PF08241 Methyltransferase domain 58 167 3.4E-16 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL504_RS06890 bd9dbb777c26ee2013cd782363e4ab0b 677 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 374 672 5.8E-46 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AL504_RS06890 bd9dbb777c26ee2013cd782363e4ab0b 677 SUPERFAMILY SSF56059 361 672 2.0E-49 T 28-03-2018 AL504_RS06890 bd9dbb777c26ee2013cd782363e4ab0b 677 Gene3D G3DSA:3.50.30.10 233 350 1.8E-8 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS06890 bd9dbb777c26ee2013cd782363e4ab0b 677 Gene3D G3DSA:3.30.470.20 541 673 5.4E-25 T 28-03-2018 AL504_RS06890 bd9dbb777c26ee2013cd782363e4ab0b 677 SUPERFAMILY SSF52009 234 320 4.58E-5 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL504_RS06890 bd9dbb777c26ee2013cd782363e4ab0b 677 Gene3D G3DSA:3.30.1490.20 355 540 5.4E-36 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL504_RS21610 58817968245e4d3ceeaa2a40dadd2da0 299 Pfam PF00892 EamA-like transporter family 155 282 5.5E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS21610 58817968245e4d3ceeaa2a40dadd2da0 299 SUPERFAMILY SSF103481 202 285 5.49E-9 T 28-03-2018 AL504_RS21610 58817968245e4d3ceeaa2a40dadd2da0 299 SUPERFAMILY SSF103481 52 143 5.23E-6 T 28-03-2018 AL504_RS14560 9c634f4be82b199e98d1f729fe7929ab 143 SUPERFAMILY SSF55298 14 142 3.3E-24 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS14560 9c634f4be82b199e98d1f729fe7929ab 143 Pfam PF01042 Endoribonuclease L-PSP 26 140 3.0E-16 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS14560 9c634f4be82b199e98d1f729fe7929ab 143 Gene3D G3DSA:3.30.1330.40 13 141 5.3E-22 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS08475 e6e94710754cf1f8d3ffcffac9b7d1e4 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 4.2E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS08475 e6e94710754cf1f8d3ffcffac9b7d1e4 335 SUPERFAMILY SSF161098 95 313 4.45E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS08475 e6e94710754cf1f8d3ffcffac9b7d1e4 335 Gene3D G3DSA:1.10.3720.10 2 315 3.5E-44 T 28-03-2018 AL504_RS21570 b48dc813d4cd91bd8e6f2865f94da95b 420 Pfam PF07005 Putative sugar-binding N-terminal domain 5 227 1.7E-70 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL504_RS21570 b48dc813d4cd91bd8e6f2865f94da95b 420 SUPERFAMILY SSF142764 5 416 1.44E-125 T 28-03-2018 AL504_RS21570 b48dc813d4cd91bd8e6f2865f94da95b 420 Gene3D G3DSA:3.40.50.10840 4 238 4.0E-76 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL504_RS21570 b48dc813d4cd91bd8e6f2865f94da95b 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 252 412 1.5E-39 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 236 1.1E-35 T 28-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 Gene3D G3DSA:3.50.50.60 244 623 8.6E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 9 623 20.932 T 28-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 SUPERFAMILY SSF51905 254 465 1.81E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 SUPERFAMILY SSF51905 565 613 1.81E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 SUPERFAMILY SSF53335 52 117 5.22E-5 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 SUPERFAMILY SSF53335 148 223 5.22E-5 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 Gene3D G3DSA:3.40.50.150 11 243 6.4E-75 T 28-03-2018 AL504_RS14625 7fcf72cd15237a8f9036377dffabd424 623 Pfam PF01266 FAD dependent oxidoreductase 254 604 1.4E-25 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS20205 c4510f6ce0193a0abdcf3d30b4e20b1a 161 SMART SM00065 29 161 0.0022 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS20205 c4510f6ce0193a0abdcf3d30b4e20b1a 161 Gene3D G3DSA:3.30.450.40 4 161 2.2E-28 T 28-03-2018 IPR029016 GAF domain-like AL504_RS20205 c4510f6ce0193a0abdcf3d30b4e20b1a 161 SUPERFAMILY SSF55781 11 160 7.63E-44 T 28-03-2018 IPR029016 GAF domain-like AL504_RS20205 c4510f6ce0193a0abdcf3d30b4e20b1a 161 Pfam PF13185 GAF domain 54 153 1.0E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL504_RS20205 c4510f6ce0193a0abdcf3d30b4e20b1a 161 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 99 116 - T 28-03-2018 IPR000614 Free Met sulfoxide reductase conserved site AL504_RS13590 c7a3af7eb0d08ba4d6e59d81b6b0b75c 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 321 2.3E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS13590 c7a3af7eb0d08ba4d6e59d81b6b0b75c 325 Gene3D G3DSA:3.40.190.10 153 297 7.2E-9 T 28-03-2018 AL504_RS13590 c7a3af7eb0d08ba4d6e59d81b6b0b75c 325 SUPERFAMILY SSF53850 113 287 2.33E-11 T 28-03-2018 AL504_RS13590 c7a3af7eb0d08ba4d6e59d81b6b0b75c 325 PIRSF PIRSF017082 1 325 4.2E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS13590 c7a3af7eb0d08ba4d6e59d81b6b0b75c 325 Gene3D G3DSA:3.40.50.1980 12 150 9.1E-4 T 28-03-2018 AL504_RS22695 7b2ba938f4e79853f055399439105fa4 298 Gene3D G3DSA:3.40.190.10 94 179 2.3E-28 T 28-03-2018 AL504_RS22695 7b2ba938f4e79853f055399439105fa4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22695 7b2ba938f4e79853f055399439105fa4 298 SUPERFAMILY SSF53850 91 292 5.27E-44 T 28-03-2018 AL504_RS22695 7b2ba938f4e79853f055399439105fa4 298 Pfam PF03466 LysR substrate binding domain 90 290 2.0E-46 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22695 7b2ba938f4e79853f055399439105fa4 298 SUPERFAMILY SSF46785 2 113 5.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22695 7b2ba938f4e79853f055399439105fa4 298 Gene3D G3DSA:1.10.10.10 3 93 3.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22695 7b2ba938f4e79853f055399439105fa4 298 Gene3D G3DSA:3.40.190.10 180 266 3.4E-22 T 28-03-2018 AL504_RS20725 a8a93752607b2b6d15de8e276b82135c 367 SUPERFAMILY SSF81891 130 313 5.89E-32 T 28-03-2018 AL504_RS20725 a8a93752607b2b6d15de8e276b82135c 367 Pfam PF01743 Poly A polymerase head domain 12 130 2.2E-16 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL504_RS20725 a8a93752607b2b6d15de8e276b82135c 367 Gene3D G3DSA:1.10.3090.10 129 366 4.9E-26 T 28-03-2018 AL504_RS20725 a8a93752607b2b6d15de8e276b82135c 367 SUPERFAMILY SSF81301 7 127 9.92E-30 T 28-03-2018 AL504_RS20725 a8a93752607b2b6d15de8e276b82135c 367 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 156 217 4.4E-8 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL504_RS20725 a8a93752607b2b6d15de8e276b82135c 367 Gene3D G3DSA:3.30.460.10 2 128 4.1E-30 T 28-03-2018 AL504_RS20725 a8a93752607b2b6d15de8e276b82135c 367 PIRSF PIRSF000813 10 367 4.8E-121 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL504_RS06050 942f9f978a44f8dca07c10cf7cd6aaf1 115 Pfam PF03658 RnfH family Ubiquitin 11 93 2.9E-28 T 28-03-2018 IPR005346 RnfH protein AL504_RS06050 942f9f978a44f8dca07c10cf7cd6aaf1 115 Gene3D G3DSA:3.10.20.280 5 94 1.8E-30 T 28-03-2018 IPR005346 RnfH protein AL504_RS06050 942f9f978a44f8dca07c10cf7cd6aaf1 115 SUPERFAMILY SSF54285 10 84 1.37E-20 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL504_RS06050 942f9f978a44f8dca07c10cf7cd6aaf1 115 Hamap MF_00460 Protein RnfH [rnfH]. 11 101 21.938 T 28-03-2018 IPR005346 RnfH protein AL504_RS27705 89b5c9d762ba9e40b6127264340cf47c 220 PIRSF PIRSF010372 11 216 7.1E-69 T 28-03-2018 IPR007396 Transcriptional regulator PAI 2-type AL504_RS27705 89b5c9d762ba9e40b6127264340cf47c 220 SUPERFAMILY SSF50475 21 202 6.17E-41 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS27705 89b5c9d762ba9e40b6127264340cf47c 220 Gene3D G3DSA:2.30.110.10 11 217 5.8E-71 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS27705 89b5c9d762ba9e40b6127264340cf47c 220 Pfam PF04299 Putative FMN-binding domain 11 177 1.2E-63 T 28-03-2018 IPR007396 Transcriptional regulator PAI 2-type AL504_RS25920 bbe6453a5478c4d7304b721870491e28 323 Gene3D G3DSA:3.40.190.10 125 233 1.7E-9 T 28-03-2018 AL504_RS25920 bbe6453a5478c4d7304b721870491e28 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 320 9.0E-86 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25920 bbe6453a5478c4d7304b721870491e28 323 SUPERFAMILY SSF53850 114 281 8.32E-9 T 28-03-2018 AL504_RS25920 bbe6453a5478c4d7304b721870491e28 323 PIRSF PIRSF017082 1 323 1.3E-89 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 SMART SM00226 3 152 1.6E-51 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 6.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 48 64 6.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 124 139 6.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 6.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 SUPERFAMILY SSF52788 1 153 3.92E-54 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 Gene3D G3DSA:3.40.50.2300 1 161 8.1E-55 T 28-03-2018 AL504_RS31250 9393adcbae7694bd64d2eb787dce83e8 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 148 2.5E-42 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL504_RS28950 7c8a1a90db153faac10a32407c9bf17e 67 SUPERFAMILY SSF47413 16 62 2.49E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS28950 7c8a1a90db153faac10a32407c9bf17e 67 Gene3D G3DSA:1.10.260.40 6 65 2.3E-7 T 28-03-2018 AL504_RS28950 7c8a1a90db153faac10a32407c9bf17e 67 Pfam PF13560 Helix-turn-helix domain 18 56 2.0E-6 T 28-03-2018 AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 5.0E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 5.0E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 Gene3D G3DSA:1.10.10.60 15 71 3.0E-17 T 28-03-2018 AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 Pfam PF08359 YsiA-like protein, C-terminal region 78 202 1.5E-7 T 28-03-2018 IPR013570 Transcription regulator YsiA, C-terminal AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 SUPERFAMILY SSF48498 94 207 4.17E-20 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 67 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 Gene3D G3DSA:1.10.357.10 72 212 8.5E-22 T 28-03-2018 AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 SUPERFAMILY SSF46689 10 88 3.59E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07735 91efbd32a7633e94f017812093c7c14d 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 68 1.6E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01925 68e02ffbdec248121712c5c6fc290f74 167 SUPERFAMILY SSF141452 1 162 1.96E-43 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AL504_RS01925 68e02ffbdec248121712c5c6fc290f74 167 Pfam PF05638 Type VI secretion system effector, Hcp 5 139 3.8E-38 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AL504_RS01925 68e02ffbdec248121712c5c6fc290f74 167 Gene3D G3DSA:2.30.110.20 1 163 2.1E-46 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AL504_RS01925 68e02ffbdec248121712c5c6fc290f74 167 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 15 146 3.0E-24 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AL504_RS25470 5222824c914fca088f102f7a741093f7 163 Gene3D G3DSA:3.90.1170.40 1 153 3.8E-48 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS25470 5222824c914fca088f102f7a741093f7 163 SUPERFAMILY SSF54690 4 152 2.35E-45 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS25470 5222824c914fca088f102f7a741093f7 163 Pfam PF02391 MoaE protein 8 122 7.0E-32 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL504_RS18205 97a65cdef671fed8df0d6e358da2643b 285 Gene3D G3DSA:1.10.10.10 69 166 3.8E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18205 97a65cdef671fed8df0d6e358da2643b 285 Pfam PF10134 Replication initiator protein A 32 261 6.8E-93 T 28-03-2018 IPR018777 Replication initiator protein A AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 441 3.3E-29 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 Pfam PF13247 4Fe-4S dicluster domain 175 271 3.2E-37 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 494 2.8E-285 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 Gene3D G3DSA:3.30.70.20 5 197 5.4E-29 T 28-03-2018 AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 Gene3D G3DSA:3.30.70.20 237 359 3.0E-30 T 28-03-2018 AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 Gene3D G3DSA:3.30.70.20 360 471 6.5E-29 T 28-03-2018 AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 Gene3D G3DSA:3.30.70.20 198 236 2.7E-18 T 28-03-2018 AL504_RS02685 3d9d196ce9f6ccc3803879341723debb 520 SUPERFAMILY SSF54862 1 499 3.87E-179 T 28-03-2018 AL504_RS01405 83819886acfe088f9012098abda75056 296 Gene3D G3DSA:1.10.10.10 1 87 2.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01405 83819886acfe088f9012098abda75056 296 Pfam PF03466 LysR substrate binding domain 97 294 7.7E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01405 83819886acfe088f9012098abda75056 296 Gene3D G3DSA:3.40.190.10 180 266 7.8E-17 T 28-03-2018 AL504_RS01405 83819886acfe088f9012098abda75056 296 SUPERFAMILY SSF53850 89 293 1.65E-35 T 28-03-2018 AL504_RS01405 83819886acfe088f9012098abda75056 296 SUPERFAMILY SSF46785 2 82 5.44E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01405 83819886acfe088f9012098abda75056 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01405 83819886acfe088f9012098abda75056 296 Gene3D G3DSA:3.40.190.10 93 179 2.3E-10 T 28-03-2018 AL504_RS14995 6f33bc04890216c7601f09c0065ce099 373 SUPERFAMILY SSF74653 281 362 1.03E-13 T 28-03-2018 AL504_RS14995 6f33bc04890216c7601f09c0065ce099 373 Gene3D G3DSA:3.30.1150.10 271 371 8.9E-16 T 28-03-2018 AL504_RS14995 6f33bc04890216c7601f09c0065ce099 373 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 299 359 5.9E-11 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS14995 6f33bc04890216c7601f09c0065ce099 373 TIGRFAM TIGR02794 tolA_full: protein TolA 23 361 1.8E-54 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AL504_RS14995 6f33bc04890216c7601f09c0065ce099 373 Pfam PF13103 TonB C terminal 284 359 2.0E-12 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS27070 9210861816d3bbbb8ea534dfe2e66543 116 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 7 116 6.0E-35 T 28-03-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AL504_RS27070 9210861816d3bbbb8ea534dfe2e66543 116 Gene3D G3DSA:3.60.90.10 2 116 1.1E-38 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AL504_RS27070 9210861816d3bbbb8ea534dfe2e66543 116 Pfam PF02675 S-adenosylmethionine decarboxylase 10 116 1.1E-34 T 28-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AL504_RS27070 9210861816d3bbbb8ea534dfe2e66543 116 SUPERFAMILY SSF56276 7 116 1.96E-31 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AL504_RS27070 9210861816d3bbbb8ea534dfe2e66543 116 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 4 116 24.393 T 28-03-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 SUPERFAMILY SSF52518 2 175 1.05E-64 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 330 6.9E-45 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 565 5.6E-247 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 541 9.7E-48 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 Gene3D G3DSA:3.40.50.970 354 564 2.5E-49 T 28-03-2018 AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 Gene3D G3DSA:3.40.50.1220 193 353 5.5E-51 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 SUPERFAMILY SSF52518 371 566 1.79E-66 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 SUPERFAMILY SSF52467 187 361 4.82E-63 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 Gene3D G3DSA:3.40.50.970 1 192 3.8E-64 T 28-03-2018 AL504_RS13145 547ce1ed9a65a48d8a98154a3b28d1ed 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 5.6E-60 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL504_RS19030 c7c5f191c4282d35c474356f5e814766 306 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 284 6.9E-62 T 28-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 AL504_RS30780 e5b3bbe857d433b35065635cbc2d86b9 84 Gene3D G3DSA:1.10.10.60 3 57 5.6E-4 T 28-03-2018 AL504_RS19670 b7351c07b782f920d2fb7c5893a444c5 233 Gene3D G3DSA:1.10.10.10 134 233 5.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19670 b7351c07b782f920d2fb7c5893a444c5 233 SMART SM00862 152 230 1.8E-10 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS19670 b7351c07b782f920d2fb7c5893a444c5 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 230 6.8E-11 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS19670 b7351c07b782f920d2fb7c5893a444c5 233 Gene3D G3DSA:3.40.50.2300 1 133 8.1E-13 T 28-03-2018 AL504_RS19670 b7351c07b782f920d2fb7c5893a444c5 233 Pfam PF00072 Response regulator receiver domain 12 111 1.0E-5 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS19670 b7351c07b782f920d2fb7c5893a444c5 233 SUPERFAMILY SSF52172 1 121 1.99E-15 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS19670 b7351c07b782f920d2fb7c5893a444c5 233 SUPERFAMILY SSF46894 135 231 1.56E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS05205 417c0dc50ff6d7173fac9134a5493abc 340 Gene3D G3DSA:3.20.20.30 12 330 8.8E-75 T 28-03-2018 AL504_RS05205 417c0dc50ff6d7173fac9134a5493abc 340 SUPERFAMILY SSF51679 7 327 3.4E-82 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS05205 417c0dc50ff6d7173fac9134a5493abc 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 327 2.8E-130 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 AL504_RS05205 417c0dc50ff6d7173fac9134a5493abc 340 Pfam PF00296 Luciferase-like monooxygenase 21 303 2.0E-39 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS22080 7f5dc4e7fd69a8cca66eb49f32175013 187 SUPERFAMILY SSF88659 117 178 7.63E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22080 7f5dc4e7fd69a8cca66eb49f32175013 187 Pfam PF04542 Sigma-70 region 2 24 87 2.5E-13 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22080 7f5dc4e7fd69a8cca66eb49f32175013 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 178 2.4E-25 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22080 7f5dc4e7fd69a8cca66eb49f32175013 187 Gene3D G3DSA:1.10.10.10 109 184 1.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22080 7f5dc4e7fd69a8cca66eb49f32175013 187 Pfam PF08281 Sigma-70, region 4 122 173 1.0E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS22080 7f5dc4e7fd69a8cca66eb49f32175013 187 Gene3D G3DSA:1.10.1740.10 17 108 3.6E-17 T 28-03-2018 AL504_RS22080 7f5dc4e7fd69a8cca66eb49f32175013 187 SUPERFAMILY SSF88946 21 103 1.88E-17 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26085 1dbd226bfb4cbcaf6f1d922c537b3094 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 1.5E-30 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS26085 1dbd226bfb4cbcaf6f1d922c537b3094 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 1.8E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26085 1dbd226bfb4cbcaf6f1d922c537b3094 230 Gene3D G3DSA:1.10.3720.10 1 214 4.9E-46 T 28-03-2018 AL504_RS26085 1dbd226bfb4cbcaf6f1d922c537b3094 230 SUPERFAMILY SSF161098 13 207 5.23E-48 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 Gene3D G3DSA:3.40.50.980 157 312 3.6E-37 T 28-03-2018 AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 SUPERFAMILY SSF56801 2 506 2.35E-132 T 28-03-2018 AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 494 2.2E-21 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 Pfam PF00501 AMP-binding enzyme 8 410 1.2E-87 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 Gene3D G3DSA:2.30.38.10 313 403 1.6E-23 T 28-03-2018 AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 Gene3D G3DSA:3.30.300.30 404 510 6.3E-31 T 28-03-2018 AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 Gene3D G3DSA:3.40.50.980 1 156 3.7E-39 T 28-03-2018 AL504_RS29470 0ddb73e564ecdc951b1dfebe176d2de9 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS22245 2d4560ec1172ca62517373702b5b794e 311 Pfam PF13391 HNH endonuclease 208 259 7.1E-8 T 28-03-2018 IPR003615 HNH nuclease AL504_RS22345 64c805f6c798ed98f636b3c14998bc0b 338 Pfam PF05035 2-keto-3-deoxy-galactonokinase 15 320 2.4E-99 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 AL504_RS22345 64c805f6c798ed98f636b3c14998bc0b 338 Gene3D G3DSA:3.30.420.40 4 250 0.0013 T 28-03-2018 AL504_RS00315 37683a6e524de22ef074922b75eb15bc 382 Pfam PF03781 Sulfatase-modifying factor enzyme 1 50 363 2.2E-82 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL504_RS00315 37683a6e524de22ef074922b75eb15bc 382 SUPERFAMILY SSF56436 48 366 7.35E-83 T 28-03-2018 IPR016187 C-type lectin fold AL504_RS00315 37683a6e524de22ef074922b75eb15bc 382 Gene3D G3DSA:3.90.1580.10 34 379 1.1E-91 T 28-03-2018 AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 6.4E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 Gene3D G3DSA:1.10.10.10 118 225 4.3E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 SMART SM00862 145 218 7.5E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 Pfam PF00072 Response regulator receiver domain 3 112 8.2E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 Gene3D G3DSA:3.40.50.2300 1 117 9.8E-35 T 28-03-2018 AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 SMART SM00448 1 112 2.2E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 SUPERFAMILY SSF52172 1 120 3.98E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS10730 eb2e4fcebb74e20ced76c45c0f905b09 229 SUPERFAMILY SSF46894 120 219 5.39E-25 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS10415 cb3273b581e1f4c545a31a42d6719c40 253 Gene3D G3DSA:2.10.109.10 121 251 1.4E-16 T 28-03-2018 AL504_RS10415 cb3273b581e1f4c545a31a42d6719c40 253 Pfam PF00717 Peptidase S24-like 166 233 2.0E-8 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS10415 cb3273b581e1f4c545a31a42d6719c40 253 Gene3D G3DSA:1.10.260.40 10 72 1.6E-4 T 28-03-2018 AL504_RS10415 cb3273b581e1f4c545a31a42d6719c40 253 SUPERFAMILY SSF51306 149 249 4.06E-17 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS24095 d650123a479e4d0877538cea0409e951 255 Gene3D G3DSA:3.40.50.1820 17 251 1.1E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24095 d650123a479e4d0877538cea0409e951 255 SUPERFAMILY SSF53474 152 249 3.81E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24095 d650123a479e4d0877538cea0409e951 255 SUPERFAMILY SSF53474 27 123 3.81E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24095 d650123a479e4d0877538cea0409e951 255 Pfam PF12697 Alpha/beta hydrolase family 34 243 1.3E-16 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 109 238 4.5E-36 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 SUPERFAMILY SSF55174 3 84 1.02E-12 T 28-03-2018 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 SUPERFAMILY SSF55120 65 241 1.09E-37 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 Gene3D G3DSA:3.30.70.1560 162 220 3.6E-31 T 28-03-2018 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 Pfam PF01479 S4 domain 4 40 2.8E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 Pfam PF00849 RNA pseudouridylate synthase 66 161 1.9E-8 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 Gene3D G3DSA:3.30.70.580 69 161 2.3E-15 T 28-03-2018 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 Gene3D G3DSA:3.10.290.10 1 68 1.0E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS06715 3a84db3dd20130db5082732dd1c851b5 243 SMART SM00363 4 61 0.0016 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS13980 400a2f9bfeb3aea5cfa6c61c8fdf124d 307 Pfam PF00294 pfkB family carbohydrate kinase 6 296 5.9E-56 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL504_RS13980 400a2f9bfeb3aea5cfa6c61c8fdf124d 307 SUPERFAMILY SSF53613 2 305 2.18E-79 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS13980 400a2f9bfeb3aea5cfa6c61c8fdf124d 307 Gene3D G3DSA:3.40.1190.20 1 307 5.2E-66 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 SUPERFAMILY SSF52540 299 525 3.07E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 Pfam PF00005 ABC transporter 337 469 2.7E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 Pfam PF00005 ABC transporter 18 184 1.1E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 Gene3D G3DSA:3.40.50.300 2 283 5.9E-49 T 28-03-2018 AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 SUPERFAMILY SSF52540 6 237 4.58E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 SMART SM00382 345 514 2.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 SMART SM00382 26 238 3.2E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 Gene3D G3DSA:3.40.50.300 284 534 1.2E-46 T 28-03-2018 AL504_RS05245 f901a0653d57373214d7525f6f0f6e64 534 Pfam PF12848 ABC transporter 224 311 1.8E-18 T 28-03-2018 IPR032781 ABC-transporter extension domain AL504_RS15930 7a7bc272cf97484fdd72f9c37bd04fcb 196 Pfam PF02622 Uncharacterized ACR, COG1678 26 183 1.7E-44 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 AL504_RS15930 7a7bc272cf97484fdd72f9c37bd04fcb 196 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 15 196 37.37 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 AL504_RS15930 7a7bc272cf97484fdd72f9c37bd04fcb 196 Gene3D G3DSA:3.40.1740.10 121 187 8.9E-9 T 28-03-2018 AL504_RS15930 7a7bc272cf97484fdd72f9c37bd04fcb 196 Gene3D G3DSA:3.40.1740.10 2 105 2.0E-28 T 28-03-2018 AL504_RS15930 7a7bc272cf97484fdd72f9c37bd04fcb 196 SUPERFAMILY SSF143456 16 196 1.44E-59 T 28-03-2018 AL504_RS21270 a7443c9cb06665f976dc133aa7daca52 208 Gene3D G3DSA:3.40.50.1000 65 208 5.8E-24 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21270 a7443c9cb06665f976dc133aa7daca52 208 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 176 8.0E-27 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21270 a7443c9cb06665f976dc133aa7daca52 208 SUPERFAMILY SSF56784 2 207 1.63E-39 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21270 a7443c9cb06665f976dc133aa7daca52 208 Gene3D G3DSA:3.40.50.1000 1 60 0.11 T 28-03-2018 IPR023214 HAD-like domain AL504_RS16565 2c9a65696390b5c4d3d7a77bfb5c9758 256 Gene3D G3DSA:3.20.20.370 4 251 7.3E-108 T 28-03-2018 AL504_RS16565 2c9a65696390b5c4d3d7a77bfb5c9758 256 Pfam PF03746 LamB/YcsF family 5 243 6.0E-104 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL504_RS16565 2c9a65696390b5c4d3d7a77bfb5c9758 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 47.088 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL504_RS16565 2c9a65696390b5c4d3d7a77bfb5c9758 256 SUPERFAMILY SSF88713 4 250 1.11E-100 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS22750 006dc901c0bfbe20df5765d6bf76625f 401 Gene3D G3DSA:3.30.70.20 11 118 8.4E-5 T 28-03-2018 AL504_RS22750 006dc901c0bfbe20df5765d6bf76625f 401 Gene3D G3DSA:1.20.950.20 175 385 1.7E-31 T 28-03-2018 AL504_RS22750 006dc901c0bfbe20df5765d6bf76625f 401 SUPERFAMILY SSF54862 43 97 6.42E-6 T 28-03-2018 AL504_RS22750 006dc901c0bfbe20df5765d6bf76625f 401 TIGRFAM TIGR02484 CitB: CitB domain protein 40 395 7.1E-127 T 28-03-2018 IPR012830 Citrate utilization protein B AL504_RS22750 006dc901c0bfbe20df5765d6bf76625f 401 SUPERFAMILY SSF103501 180 392 3.01E-31 T 28-03-2018 IPR023234 NarG-like domain AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 Pfam PF02110 Hydroxyethylthiazole kinase family 21 262 2.1E-80 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 Gene3D G3DSA:3.40.1190.20 3 273 6.0E-55 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 21 267 32.115 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 21 264 7.3E-82 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 SUPERFAMILY SSF53613 18 261 2.18E-61 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 71 79 2.0E-37 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 40 61 2.0E-37 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 97 114 2.0E-37 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 171 188 2.0E-37 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 27 34 2.0E-37 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 127 141 2.0E-37 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS00210 246b7ddbe4757ff61b39f5729bbcb60f 273 PIRSF PIRSF000513 15 272 1.1E-91 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS30820 bfda79a100e937f11b929d05ef64e156 331 Gene3D G3DSA:3.90.1530.10 13 140 9.1E-5 T 28-03-2018 AL504_RS30820 bfda79a100e937f11b929d05ef64e156 331 SUPERFAMILY SSF109709 140 210 6.02E-10 T 28-03-2018 AL504_RS14905 186191cc377aedf17399f21ec3bc5742 103 Pfam PF05164 Cell division protein ZapA 4 89 1.2E-18 T 28-03-2018 IPR007838 Cell division protein ZapA-like AL504_RS14905 186191cc377aedf17399f21ec3bc5742 103 SUPERFAMILY SSF102829 3 97 1.7E-20 T 28-03-2018 IPR007838 Cell division protein ZapA-like AL504_RS11235 3dfef31d9fdc0803b28240ddeebaddd8 207 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 2 199 20.72 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL504_RS11235 3dfef31d9fdc0803b28240ddeebaddd8 207 Pfam PF03853 YjeF-related protein N-terminus 23 178 1.7E-36 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL504_RS11235 3dfef31d9fdc0803b28240ddeebaddd8 207 SUPERFAMILY SSF64153 6 198 3.53E-47 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL504_RS11235 3dfef31d9fdc0803b28240ddeebaddd8 207 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 22 198 8.5E-28 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL504_RS11235 3dfef31d9fdc0803b28240ddeebaddd8 207 Gene3D G3DSA:3.40.50.10260 3 200 1.5E-46 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 Pfam PF03379 CcmB protein 6 218 5.1E-63 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 9 217 5.2E-62 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PIRSF PIRSF002764 1 221 2.8E-73 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 2.3E-65 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 2.3E-65 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 2.3E-65 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 2.3E-65 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 2.3E-65 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 2.3E-65 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07500 e7ef0e69fbc15185d4943eed77a93a57 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 2.3E-65 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS23500 8adeb49014c2b3498bdcbf7ccf1ab182 183 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 4 172 33.176 T 28-03-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 AL504_RS23500 8adeb49014c2b3498bdcbf7ccf1ab182 183 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 8 166 2.9E-77 T 28-03-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 AL504_RS23500 8adeb49014c2b3498bdcbf7ccf1ab182 183 Gene3D G3DSA:2.60.120.10 9 174 2.3E-46 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS23500 8adeb49014c2b3498bdcbf7ccf1ab182 183 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 6 154 1.0E-44 T 28-03-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 AL504_RS23500 8adeb49014c2b3498bdcbf7ccf1ab182 183 SUPERFAMILY SSF51182 5 172 2.39E-51 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS18285 b7038972617d40436850ca70b094db73 317 SMART SM00849 9 228 2.3E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS18285 b7038972617d40436850ca70b094db73 317 Pfam PF00753 Metallo-beta-lactamase superfamily 8 217 2.1E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS18285 b7038972617d40436850ca70b094db73 317 Gene3D G3DSA:3.60.15.10 1 249 9.2E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS18285 b7038972617d40436850ca70b094db73 317 SUPERFAMILY SSF56281 8 316 2.75E-55 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS30210 1ab81cb233a0d56c857cfc2f4b39216c 184 Pfam PF03729 Short repeat of unknown function (DUF308) 19 87 1.0E-11 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane AL504_RS30210 1ab81cb233a0d56c857cfc2f4b39216c 184 Pfam PF03729 Short repeat of unknown function (DUF308) 133 180 4.7E-7 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane AL504_RS30210 1ab81cb233a0d56c857cfc2f4b39216c 184 Pfam PF03729 Short repeat of unknown function (DUF308) 76 145 1.9E-13 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 SUPERFAMILY SSF46689 220 268 3.51E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 Gene3D G3DSA:1.10.10.60 224 271 1.7E-11 T 28-03-2018 AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 1.9E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 1.9E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 Gene3D G3DSA:2.60.120.10 3 173 4.2E-8 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 Gene3D G3DSA:1.10.10.60 174 223 3.0E-13 T 28-03-2018 AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 SUPERFAMILY SSF51182 40 193 4.45E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 Pfam PF12833 Helix-turn-helix domain 190 267 7.1E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 SMART SM00342 184 266 5.4E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24460 5c6e66d28bfe72d9f551ca847efd84b8 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 616 47.848 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 Pfam PF02355 Protein export membrane protein 435 597 4.0E-19 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 SUPERFAMILY SSF82866 412 611 1.06E-40 T 28-03-2018 AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 361 595 1.4E-73 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 Pfam PF07549 SecD/SecF GG Motif 131 152 4.7E-6 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 Gene3D G3DSA:1.20.1640.10 393 609 5.6E-30 T 28-03-2018 AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 135 601 6.6E-143 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL504_RS25615 9028179a277e2dad5044d6b8ba897411 626 Pfam PF13721 SecD export protein N-terminal TM region 1 112 5.6E-34 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain AL504_RS11065 35f8d762bfc1caad940bb5534416c120 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 12 115 5.1E-20 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL504_RS11065 35f8d762bfc1caad940bb5534416c120 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 8 120 16.675 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL504_RS11065 35f8d762bfc1caad940bb5534416c120 133 SUPERFAMILY SSF89919 12 116 3.53E-25 T 28-03-2018 IPR023799 Ribosome-binding factor A domain AL504_RS11065 35f8d762bfc1caad940bb5534416c120 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 100 3.0E-41 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL504_RS11065 35f8d762bfc1caad940bb5534416c120 133 Gene3D G3DSA:3.30.300.20 11 119 9.9E-26 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS11065 35f8d762bfc1caad940bb5534416c120 133 Pfam PF02033 Ribosome-binding factor A 12 112 1.1E-23 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL504_RS16415 449132053430e25f482474c84457c30d 681 SUPERFAMILY SSF56935 22 681 4.45E-117 T 28-03-2018 AL504_RS16415 449132053430e25f482474c84457c30d 681 Gene3D G3DSA:2.170.130.10 24 163 1.1E-30 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS16415 449132053430e25f482474c84457c30d 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 2.8E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS16415 449132053430e25f482474c84457c30d 681 Pfam PF00593 TonB dependent receptor 237 680 9.3E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS16415 449132053430e25f482474c84457c30d 681 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 28-03-2018 IPR010916 TonB box, conserved site AL504_RS16415 449132053430e25f482474c84457c30d 681 Gene3D G3DSA:2.40.170.20 166 680 1.3E-69 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS25560 9ddb2417e284a0689ea9778d2af114ca 543 SUPERFAMILY SSF56317 237 519 5.1E-31 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS25560 9ddb2417e284a0689ea9778d2af114ca 543 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 68 489 3.9E-88 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL504_RS25560 9ddb2417e284a0689ea9778d2af114ca 543 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 9 527 21.055 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL504_RS25560 9ddb2417e284a0689ea9778d2af114ca 543 Gene3D G3DSA:3.60.110.10 229 507 4.7E-35 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS25560 9ddb2417e284a0689ea9778d2af114ca 543 Pfam PF00795 Carbon-nitrogen hydrolase 245 510 7.4E-22 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS11855 3e3818a422f998ac4d0d8685c1b28a76 212 Pfam PF07811 TadE-like protein 19 61 5.6E-7 T 28-03-2018 IPR012495 TadE-like AL504_RS13955 a084e9ffb7d02bb2f6c4df8f65708d00 597 Pfam PF00005 ABC transporter 367 523 2.9E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS13955 a084e9ffb7d02bb2f6c4df8f65708d00 597 SUPERFAMILY SSF52540 348 593 7.04E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13955 a084e9ffb7d02bb2f6c4df8f65708d00 597 Pfam PF02653 Branched-chain amino acid transport system / permease component 26 306 2.8E-30 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS13955 a084e9ffb7d02bb2f6c4df8f65708d00 597 Gene3D G3DSA:1.10.3470.10 9 311 4.8E-35 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS13955 a084e9ffb7d02bb2f6c4df8f65708d00 597 Gene3D G3DSA:3.40.50.300 344 594 3.0E-53 T 28-03-2018 AL504_RS13955 a084e9ffb7d02bb2f6c4df8f65708d00 597 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 572 594 7.1E-11 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS13955 a084e9ffb7d02bb2f6c4df8f65708d00 597 SMART SM00382 374 572 4.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS08220 ce38d7ebf18d9c54e6514adedfe1aa45 368 Gene3D G3DSA:1.50.10.10 8 367 1.4E-31 T 28-03-2018 AL504_RS08220 ce38d7ebf18d9c54e6514adedfe1aa45 368 SUPERFAMILY SSF48208 13 365 5.61E-79 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL504_RS08220 ce38d7ebf18d9c54e6514adedfe1aa45 368 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 42 360 1.8E-36 T 28-03-2018 AL504_RS29605 4b14a588d3f62695691fff6ec7d02f39 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 308 4.1E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29605 4b14a588d3f62695691fff6ec7d02f39 312 SUPERFAMILY SSF161098 92 295 2.35E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29605 4b14a588d3f62695691fff6ec7d02f39 312 Gene3D G3DSA:1.10.3720.10 2 299 7.4E-41 T 28-03-2018 AL504_RS25820 df077e27aa3d5f070ffe5b521fda7777 109 Gene3D G3DSA:2.60.120.10 5 108 5.5E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS25820 df077e27aa3d5f070ffe5b521fda7777 109 SUPERFAMILY SSF51182 29 88 3.39E-10 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.5E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.5E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 9.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 9.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 9.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 9.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 256 4.4E-52 T 28-03-2018 AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 Gene3D G3DSA:3.40.50.720 2 258 1.7E-58 T 28-03-2018 AL504_RS06995 0e7b82a8018a7969812bec677611d1f4 259 SUPERFAMILY SSF51735 12 256 1.48E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28245 2f58c7680c2c39a65062442988a43110 300 Gene3D G3DSA:1.10.10.10 3 92 1.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28245 2f58c7680c2c39a65062442988a43110 300 Gene3D G3DSA:3.40.190.10 177 264 1.3E-28 T 28-03-2018 AL504_RS28245 2f58c7680c2c39a65062442988a43110 300 Pfam PF03466 LysR substrate binding domain 89 293 4.5E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS28245 2f58c7680c2c39a65062442988a43110 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.1E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS28245 2f58c7680c2c39a65062442988a43110 300 SUPERFAMILY SSF46785 7 112 1.77E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28245 2f58c7680c2c39a65062442988a43110 300 SUPERFAMILY SSF53850 90 295 2.17E-51 T 28-03-2018 AL504_RS28245 2f58c7680c2c39a65062442988a43110 300 Gene3D G3DSA:3.40.190.10 93 176 8.5E-21 T 28-03-2018 AL504_RS12630 8ad68bd601fd0c5a03732a123a44b385 391 Gene3D G3DSA:2.40.50.100 181 377 2.4E-5 T 28-03-2018 AL504_RS12630 8ad68bd601fd0c5a03732a123a44b385 391 Gene3D G3DSA:1.10.287.470 148 180 0.24 T 28-03-2018 AL504_RS12630 8ad68bd601fd0c5a03732a123a44b385 391 Gene3D G3DSA:2.40.50.100 61 133 3.0E-18 T 28-03-2018 AL504_RS12630 8ad68bd601fd0c5a03732a123a44b385 391 SUPERFAMILY SSF111369 50 297 7.59E-74 T 28-03-2018 AL504_RS12630 8ad68bd601fd0c5a03732a123a44b385 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 372 3.0E-77 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS12630 8ad68bd601fd0c5a03732a123a44b385 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 291 9.5E-12 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 177 269 1.1E-25 T 28-03-2018 AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 SUPERFAMILY SSF51735 12 270 6.71E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 Pfam PF00106 short chain dehydrogenase 13 159 1.5E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 201 3.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 3.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 Gene3D G3DSA:3.40.50.720 2 271 1.9E-65 T 28-03-2018 AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 220 6.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 6.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 232 252 6.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 201 6.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20345 f5cefe6b0fd51ea9cd6bad43e576cefe 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS18950 5beced77dffeb7f77fb2e12e8a5ba40c 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 6.7E-28 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS18950 5beced77dffeb7f77fb2e12e8a5ba40c 218 Gene3D G3DSA:1.10.3720.10 2 218 4.3E-36 T 28-03-2018 AL504_RS18950 5beced77dffeb7f77fb2e12e8a5ba40c 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 212 4.9E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS18950 5beced77dffeb7f77fb2e12e8a5ba40c 218 SUPERFAMILY SSF161098 13 207 4.19E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 Gene3D G3DSA:3.40.50.620 4 125 1.6E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 9 466 2.8E-166 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 12 24 5.6E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 37 5.6E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 189 199 5.6E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 54 5.6E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 205 213 5.6E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 Gene3D G3DSA:3.40.50.620 126 241 1.6E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 Gene3D G3DSA:1.10.10.350 378 468 2.0E-19 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 SUPERFAMILY SSF48163 309 466 9.16E-38 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 Gene3D G3DSA:1.10.1160.10 242 324 4.9E-33 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 SUPERFAMILY SSF52374 9 305 1.37E-111 T 28-03-2018 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 8 468 30.978 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 315 1.0E-104 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL504_RS15680 f8a9fbee7a793dee22a0add4abec45cf 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS28170 ccfda4c6ddbf5167d58080aa103a1f11 241 Gene3D G3DSA:1.10.760.10 120 222 2.7E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28170 ccfda4c6ddbf5167d58080aa103a1f11 241 Gene3D G3DSA:1.10.760.10 26 115 5.5E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28170 ccfda4c6ddbf5167d58080aa103a1f11 241 Pfam PF00034 Cytochrome c 153 218 9.2E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28170 ccfda4c6ddbf5167d58080aa103a1f11 241 SUPERFAMILY SSF46626 47 118 2.28E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28170 ccfda4c6ddbf5167d58080aa103a1f11 241 PIRSF PIRSF000005 6 224 5.7E-59 T 28-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL504_RS28170 ccfda4c6ddbf5167d58080aa103a1f11 241 SUPERFAMILY SSF46626 136 221 1.25E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28170 ccfda4c6ddbf5167d58080aa103a1f11 241 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 48 111 6.0E-5 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 241 252 4.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 342 359 4.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 321 340 4.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 36 67 9.5E-13 T 28-03-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 Gene3D G3DSA:3.40.50.720 145 407 2.7E-34 T 28-03-2018 AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 Pfam PF00106 short chain dehydrogenase 171 360 6.7E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 SUPERFAMILY SSF51735 169 394 4.92E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 72 131 1.1E-6 T 28-03-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AL504_RS13930 b1ba29ca44dafd37b58e888b2056fff8 413 SUPERFAMILY SSF50249 37 133 2.06E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS30825 0689e4f2f9b154ef622e011e71df424e 230 Pfam PF01844 HNH endonuclease 178 229 1.2E-12 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AL504_RS30825 0689e4f2f9b154ef622e011e71df424e 230 Gene3D G3DSA:3.40.1800.10 161 229 8.3E-13 T 28-03-2018 AL504_RS30825 0689e4f2f9b154ef622e011e71df424e 230 SMART SM00507 165 225 2.6E-6 T 28-03-2018 IPR003615 HNH nuclease AL504_RS14705 2aca75346e376e0a2c961034ded76c23 239 Pfam PF13468 Glyoxalase-like domain 10 184 1.0E-31 T 28-03-2018 IPR025870 Glyoxalase-like domain AL504_RS14705 2aca75346e376e0a2c961034ded76c23 239 SUPERFAMILY SSF54593 6 109 5.64E-9 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS14705 2aca75346e376e0a2c961034ded76c23 239 Gene3D G3DSA:3.10.180.10 3 160 4.7E-11 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS12385 ae45cd014b774f1e74ec06b7736e9fe1 225 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS12385 ae45cd014b774f1e74ec06b7736e9fe1 225 Pfam PF00005 ABC transporter 26 161 2.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12385 ae45cd014b774f1e74ec06b7736e9fe1 225 SUPERFAMILY SSF52540 5 212 2.01E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12385 ae45cd014b774f1e74ec06b7736e9fe1 225 SMART SM00382 26 206 5.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12385 ae45cd014b774f1e74ec06b7736e9fe1 225 Gene3D G3DSA:3.40.50.300 1 224 1.6E-55 T 28-03-2018 AL504_RS27520 d9f64b46a12c80806f747605be228b53 142 Gene3D G3DSA:3.10.129.10 17 135 9.4E-27 T 28-03-2018 AL504_RS27520 d9f64b46a12c80806f747605be228b53 142 Pfam PF03061 Thioesterase superfamily 49 122 9.2E-15 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS27520 d9f64b46a12c80806f747605be228b53 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 36 116 6.2E-10 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL504_RS27520 d9f64b46a12c80806f747605be228b53 142 SUPERFAMILY SSF54637 7 134 4.27E-27 T 28-03-2018 IPR029069 HotDog domain AL504_RS28145 ba88a76f20dff1a50056061c46cfa5bf 236 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 11 186 9.0E-82 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL504_RS28145 ba88a76f20dff1a50056061c46cfa5bf 236 Gene3D G3DSA:1.10.760.10 42 217 4.0E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28145 ba88a76f20dff1a50056061c46cfa5bf 236 SUPERFAMILY SSF46626 21 202 3.01E-28 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS28145 ba88a76f20dff1a50056061c46cfa5bf 236 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 11 190 3.7E-78 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL504_RS02305 f0073b47c2d64e1d4848ee2f714b294f 91 SUPERFAMILY SSF82649 5 62 5.18E-5 T 28-03-2018 AL504_RS02305 f0073b47c2d64e1d4848ee2f714b294f 91 Gene3D G3DSA:3.30.390.50 1 88 2.1E-28 T 28-03-2018 AL504_RS02305 f0073b47c2d64e1d4848ee2f714b294f 91 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 7 63 6.4E-6 T 28-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 Gene3D G3DSA:1.10.10.10 1 76 2.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 SMART SM00895 163 288 1.2E-14 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 SUPERFAMILY SSF46785 8 83 1.14E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 SMART SM00345 16 74 3.0E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 SMART SM00345 95 151 1.8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 Pfam PF07729 FCD domain 163 287 2.1E-17 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 SUPERFAMILY SSF48008 160 291 1.15E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 Gene3D G3DSA:1.20.120.530 159 293 7.8E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 Gene3D G3DSA:1.10.10.10 88 158 2.0E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11970 722472d984558a719205ddd8c8ea0ffb 293 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 74 6.8E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS15835 506fca270c98731760255e8240f725ba 365 Gene3D G3DSA:3.40.190.10 150 317 2.7E-27 T 28-03-2018 AL504_RS15835 506fca270c98731760255e8240f725ba 365 Gene3D G3DSA:3.40.190.10 39 149 2.1E-7 T 28-03-2018 AL504_RS15835 506fca270c98731760255e8240f725ba 365 SUPERFAMILY SSF53850 47 344 2.93E-56 T 28-03-2018 AL504_RS15835 506fca270c98731760255e8240f725ba 365 Pfam PF13416 Bacterial extracellular solute-binding protein 62 323 6.3E-21 T 28-03-2018 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 Gene3D G3DSA:1.10.287.950 34 323 3.1E-21 T 28-03-2018 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 Gene3D G3DSA:1.10.287.950 324 521 2.9E-48 T 28-03-2018 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 Pfam PF02203 Tar ligand binding domain homologue 5 169 2.0E-13 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 8.5E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 8.5E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 8.5E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 8.5E-53 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 SUPERFAMILY SSF47170 33 181 3.14E-7 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 SMART SM00283 270 517 3.1E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 SMART SM00304 217 269 2.4E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 SUPERFAMILY SSF58104 237 522 1.26E-71 T 28-03-2018 AL504_RS17480 32523bb23ccf043098851bdd4e527a9e 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 485 2.1E-49 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 Gene3D G3DSA:3.40.50.980 48 238 1.2E-28 T 28-03-2018 AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 Gene3D G3DSA:3.40.50.980 239 394 7.3E-39 T 28-03-2018 AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 SUPERFAMILY SSF56801 47 587 4.19E-121 T 28-03-2018 AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 500 575 5.9E-16 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 Pfam PF00501 AMP-binding enzyme 55 490 1.2E-75 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 Gene3D G3DSA:2.30.38.10 395 483 1.1E-16 T 28-03-2018 AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 Gene3D G3DSA:3.30.300.30 485 602 2.1E-24 T 28-03-2018 AL504_RS01710 89e59a2a3de5c0fcfd3e8f0922bdd752 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 234 245 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS20730 3c71a8417bb9d60b6784f0ef2ae6c902 393 SUPERFAMILY SSF53335 25 385 6.58E-92 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS20730 3c71a8417bb9d60b6784f0ef2ae6c902 393 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 89 321 4.3E-54 T 28-03-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 AL504_RS20730 3c71a8417bb9d60b6784f0ef2ae6c902 393 Gene3D G3DSA:3.40.50.150 81 363 2.7E-10 T 28-03-2018 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 Gene3D G3DSA:3.40.50.300 618 949 3.0E-56 T 28-03-2018 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 SUPERFAMILY SSF52540 624 928 1.08E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 Gene3D G3DSA:3.40.50.300 9 36 0.012 T 28-03-2018 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 Gene3D G3DSA:1.10.8.280 286 403 5.4E-34 T 28-03-2018 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 Gene3D G3DSA:3.40.50.300 432 617 1.3E-21 T 28-03-2018 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 932 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 Gene3D G3DSA:3.40.50.300 37 87 1.8E-4 T 28-03-2018 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 ProSitePatterns PS00211 ABC transporters family signature. 837 851 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 Gene3D G3DSA:3.30.190.20 128 247 1.4E-41 T 28-03-2018 AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 SUPERFAMILY SSF52540 5 205 6.27E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 SUPERFAMILY SSF52540 438 577 6.27E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20125 72a4ac0cbf8903e788ddf9cb5c849a88 953 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 947 22.143 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AL504_RS02230 16b36bc0c051789e7b016f26bd3e1660 332 SUPERFAMILY SSF103025 17 247 1.13E-49 T 28-03-2018 AL504_RS02230 16b36bc0c051789e7b016f26bd3e1660 332 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 192 253 6.7E-27 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site AL504_RS02230 16b36bc0c051789e7b016f26bd3e1660 332 Gene3D G3DSA:3.30.70.1400 24 244 2.3E-24 T 28-03-2018 AL504_RS21550 43500a2d3c78befcd6b5da4520a16548 212 Gene3D G3DSA:3.40.225.10 3 195 1.5E-50 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS21550 43500a2d3c78befcd6b5da4520a16548 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 186 1.1E-41 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS21550 43500a2d3c78befcd6b5da4520a16548 212 SMART SM01007 9 187 2.7E-49 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS21550 43500a2d3c78befcd6b5da4520a16548 212 SUPERFAMILY SSF53639 4 207 1.33E-52 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS07550 bd5cc665be4d3ea7233b02163e1988d0 255 SUPERFAMILY SSF54862 53 233 2.41E-66 T 28-03-2018 AL504_RS07550 bd5cc665be4d3ea7233b02163e1988d0 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS07550 bd5cc665be4d3ea7233b02163e1988d0 255 Pfam PF13247 4Fe-4S dicluster domain 103 198 5.2E-29 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS07550 bd5cc665be4d3ea7233b02163e1988d0 255 Gene3D G3DSA:3.30.70.20 53 124 3.3E-16 T 28-03-2018 AL504_RS07550 bd5cc665be4d3ea7233b02163e1988d0 255 Gene3D G3DSA:3.30.70.20 125 163 6.4E-21 T 28-03-2018 AL504_RS07550 bd5cc665be4d3ea7233b02163e1988d0 255 Gene3D G3DSA:3.30.70.20 164 241 5.9E-25 T 28-03-2018 AL504_RS17035 a8a37dca1de76761acef9e0345c783fe 348 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 25 334 4.3E-124 T 28-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC AL504_RS17035 a8a37dca1de76761acef9e0345c783fe 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 324 1.2E-32 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS17035 a8a37dca1de76761acef9e0345c783fe 348 Gene3D G3DSA:1.10.3470.10 3 329 2.3E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS17215 3d2a750bb01c915b841a379cbd63affc 311 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 3 304 4.2E-87 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AL504_RS17215 3d2a750bb01c915b841a379cbd63affc 311 Pfam PF04216 Protein involved in formate dehydrogenase formation 17 305 3.1E-109 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AL504_RS17215 3d2a750bb01c915b841a379cbd63affc 311 Gene3D G3DSA:3.90.1670.10 19 309 6.6E-93 T 28-03-2018 IPR024064 FdhE-like AL504_RS17215 3d2a750bb01c915b841a379cbd63affc 311 PIRSF PIRSF018296 1 310 1.4E-98 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AL504_RS17215 3d2a750bb01c915b841a379cbd63affc 311 SUPERFAMILY SSF144020 22 307 5.23E-82 T 28-03-2018 IPR024064 FdhE-like AL504_RS17215 3d2a750bb01c915b841a379cbd63affc 311 Hamap MF_00611 Protein FdhE [fdhE]. 2 307 34.795 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AL504_RS21110 1afef0b90f98a04c2606d39256ac9796 151 Gene3D G3DSA:3.40.930.10 1 149 2.0E-37 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL504_RS21110 1afef0b90f98a04c2606d39256ac9796 151 SUPERFAMILY SSF55804 1 146 4.71E-41 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL504_RS21110 1afef0b90f98a04c2606d39256ac9796 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL504_RS21110 1afef0b90f98a04c2606d39256ac9796 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 147 7.8E-32 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL504_RS27285 502d73e0cb9de05af297a66535d7a678 430 Pfam PF01266 FAD dependent oxidoreductase 31 381 6.3E-53 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS27285 502d73e0cb9de05af297a66535d7a678 430 SUPERFAMILY SSF51905 30 254 1.49E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27285 502d73e0cb9de05af297a66535d7a678 430 SUPERFAMILY SSF51905 345 401 1.49E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27285 502d73e0cb9de05af297a66535d7a678 430 Gene3D G3DSA:3.50.50.60 4 225 7.3E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27285 502d73e0cb9de05af297a66535d7a678 430 Gene3D G3DSA:3.30.9.10 226 344 3.3E-17 T 28-03-2018 AL504_RS03410 f26f6883ffe54317028c4a9a04280f2a 402 Pfam PF00155 Aminotransferase class I and II 36 391 1.0E-63 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS03410 f26f6883ffe54317028c4a9a04280f2a 402 Gene3D G3DSA:3.90.1150.10 275 401 4.6E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS03410 f26f6883ffe54317028c4a9a04280f2a 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL504_RS03410 f26f6883ffe54317028c4a9a04280f2a 402 SUPERFAMILY SSF53383 5 397 4.08E-105 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03410 f26f6883ffe54317028c4a9a04280f2a 402 Gene3D G3DSA:3.40.640.10 64 274 1.5E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS18140 328bf2701bacd5b04201ccb497f5a021 376 Pfam PF04245 37-kD nucleoid-associated bacterial protein 18 359 2.8E-38 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL504_RS10900 1b4779db832c1c08008f932182303015 265 Pfam PF02649 Type I GTP cyclohydrolase folE2 11 261 2.4E-88 T 28-03-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AL504_RS10900 1b4779db832c1c08008f932182303015 265 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 11 265 35.342 T 28-03-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AL504_RS10900 1b4779db832c1c08008f932182303015 265 Gene3D G3DSA:3.10.270.10 10 264 3.3E-100 T 28-03-2018 AL504_RS24560 7137a18fc28bedd3ba2e461a47b5c8cd 258 Gene3D G3DSA:3.20.20.450 163 242 7.1E-5 T 28-03-2018 IPR001633 EAL domain AL504_RS18715 e51d00c8802bd3f99331430b5dbbf534 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 128 9.4E-8 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS18715 e51d00c8802bd3f99331430b5dbbf534 138 Gene3D G3DSA:3.10.180.10 13 138 6.2E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS18715 e51d00c8802bd3f99331430b5dbbf534 138 SUPERFAMILY SSF54593 13 134 3.49E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS30915 aa5a7b235d74e8410009852c4761f5dc 165 Pfam PF07471 Phage DNA packaging protein Nu1 69 150 5.2E-15 T 28-03-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit AL504_RS17490 403451028d606209ffe7b784c7d71481 509 SUPERFAMILY SSF48557 3 504 1.02E-189 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS17490 403451028d606209ffe7b784c7d71481 509 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL504_RS17490 403451028d606209ffe7b784c7d71481 509 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 503 44.221 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17490 403451028d606209ffe7b784c7d71481 509 Pfam PF00221 Aromatic amino acid lyase 10 470 7.2E-185 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL504_RS17490 403451028d606209ffe7b784c7d71481 509 Gene3D G3DSA:1.20.200.10 198 504 2.0E-121 T 28-03-2018 AL504_RS17490 403451028d606209ffe7b784c7d71481 509 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 507 1.8E-219 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL504_RS17490 403451028d606209ffe7b784c7d71481 509 Gene3D G3DSA:1.10.275.10 1 196 6.5E-72 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS26165 0b73207614727c2a47d952db7c5a7556 557 Gene3D G3DSA:3.90.1340.10 222 310 2.5E-15 T 28-03-2018 IPR011083 Phage tail collar domain AL504_RS26165 0b73207614727c2a47d952db7c5a7556 557 SUPERFAMILY SSF88874 235 423 3.14E-7 T 28-03-2018 AL504_RS26165 0b73207614727c2a47d952db7c5a7556 557 Gene3D G3DSA:4.10.1070.10 311 415 1.2E-5 T 28-03-2018 AL504_RS18550 0e86e8ebebedd61b9cdac8924eaabf4a 442 SUPERFAMILY SSF75304 5 423 1.7E-118 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS18550 0e86e8ebebedd61b9cdac8924eaabf4a 442 Pfam PF01425 Amidase 27 415 1.4E-86 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS18550 0e86e8ebebedd61b9cdac8924eaabf4a 442 Gene3D G3DSA:3.90.1300.10 1 437 4.5E-119 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS07105 fad63e92b6090c404eecb95c7326537c 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 3.3E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS07105 fad63e92b6090c404eecb95c7326537c 327 SUPERFAMILY SSF52540 4 253 8.76E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07105 fad63e92b6090c404eecb95c7326537c 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 3.0E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS07105 fad63e92b6090c404eecb95c7326537c 327 Gene3D G3DSA:3.40.50.300 1 324 1.6E-83 T 28-03-2018 AL504_RS07105 fad63e92b6090c404eecb95c7326537c 327 Pfam PF00005 ABC transporter 32 182 1.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS07105 fad63e92b6090c404eecb95c7326537c 327 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS07105 fad63e92b6090c404eecb95c7326537c 327 SMART SM00382 40 232 1.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07015 51d0c435ab20bc14e53b825273387e4f 157 Gene3D G3DSA:3.90.470.20 6 66 9.0E-6 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS07015 51d0c435ab20bc14e53b825273387e4f 157 SUPERFAMILY SSF56214 44 110 4.01E-9 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS07015 51d0c435ab20bc14e53b825273387e4f 157 Gene3D G3DSA:3.90.470.20 67 156 0.33 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS30660 d108bf0ae22e20bc9adb6acb72186f71 329 Gene3D G3DSA:3.40.190.10 130 238 3.8E-10 T 28-03-2018 AL504_RS30660 d108bf0ae22e20bc9adb6acb72186f71 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 324 4.9E-68 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS30660 d108bf0ae22e20bc9adb6acb72186f71 329 PIRSF PIRSF017082 1 328 4.1E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS30660 d108bf0ae22e20bc9adb6acb72186f71 329 SUPERFAMILY SSF53850 119 284 3.04E-10 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 21 97 6.5E-23 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Pfam PF00384 Molybdopterin oxidoreductase 297 728 1.8E-75 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 213 224 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 SUPERFAMILY SSF54292 22 95 2.42E-20 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:3.30.70.20 145 178 0.0017 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:2.40.40.20 793 943 2.6E-34 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:3.10.20.30 18 134 2.9E-18 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 PIRSF PIRSF036643 18 955 0.0 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Pfam PF00037 4Fe-4S binding domain 210 226 1.3E-5 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 SUPERFAMILY SSF50692 768 923 2.03E-41 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:2.20.25.90 239 299 4.6E-16 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:3.40.50.740 300 506 5.3E-50 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:3.30.70.20 179 213 1.3E-8 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 SMART SM00929 104 144 9.9E-19 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 SUPERFAMILY SSF53706 241 770 7.46E-193 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 241 292 2.7E-16 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:3.30.70.20 214 238 5.7E-5 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 245 920 2.2E-285 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 SUPERFAMILY SSF54862 96 233 5.02E-38 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Pfam PF01568 Molydopterin dinucleotide binding domain 812 916 7.8E-28 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 104 143 8.5E-17 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 Gene3D G3DSA:3.40.50.740 507 780 2.0E-78 T 28-03-2018 AL504_RS25430 feb53ce13224a1a8d86fdd6f81b89738 958 SMART SM00926 240 294 3.1E-16 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS14030 6865f9c820389512393bfd456920a004 423 Gene3D G3DSA:3.90.380.10 161 423 5.5E-50 T 28-03-2018 AL504_RS14030 6865f9c820389512393bfd456920a004 423 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 88 111 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 29 54 6.3E-30 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 193 215 6.3E-30 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 6.3E-30 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 6.3E-30 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 154 180 6.3E-30 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 6.3E-30 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 SUPERFAMILY SSF55961 179 417 4.0E-51 T 28-03-2018 AL504_RS14030 6865f9c820389512393bfd456920a004 423 Pfam PF00355 Rieske [2Fe-2S] domain 45 131 2.6E-20 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 Gene3D G3DSA:2.102.10.10 43 160 1.1E-25 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 418 9.8E-18 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL504_RS14030 6865f9c820389512393bfd456920a004 423 SUPERFAMILY SSF50022 14 170 2.49E-45 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS15335 bda898c1f2268580a17756501a364021 346 Gene3D G3DSA:2.30.330.10 171 238 1.8E-7 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL504_RS15335 bda898c1f2268580a17756501a364021 346 PRINTS PR00956 Flagellar motor switch protein FliN signature 318 333 2.5E-8 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL504_RS15335 bda898c1f2268580a17756501a364021 346 PRINTS PR00956 Flagellar motor switch protein FliN signature 271 287 2.5E-8 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL504_RS15335 bda898c1f2268580a17756501a364021 346 PRINTS PR00956 Flagellar motor switch protein FliN signature 288 304 2.5E-8 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL504_RS15335 bda898c1f2268580a17756501a364021 346 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 272 340 1.1E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL504_RS15335 bda898c1f2268580a17756501a364021 346 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 52 341 1.0E-44 T 28-03-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 AL504_RS15335 bda898c1f2268580a17756501a364021 346 Gene3D G3DSA:2.30.330.10 260 345 1.1E-19 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL504_RS15335 bda898c1f2268580a17756501a364021 346 SUPERFAMILY SSF101801 272 342 2.35E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL504_RS11125 f52ebed54e1b869904e21f0052fe503e 219 SMART SM00448 1 112 3.3E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS11125 f52ebed54e1b869904e21f0052fe503e 219 Gene3D G3DSA:3.40.50.2300 1 118 5.0E-34 T 28-03-2018 AL504_RS11125 f52ebed54e1b869904e21f0052fe503e 219 Pfam PF00072 Response regulator receiver domain 3 112 3.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS11125 f52ebed54e1b869904e21f0052fe503e 219 Gene3D G3DSA:1.10.10.10 119 218 1.1E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11125 f52ebed54e1b869904e21f0052fe503e 219 SUPERFAMILY SSF52172 1 177 5.12E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS11125 f52ebed54e1b869904e21f0052fe503e 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 5.2E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS11125 f52ebed54e1b869904e21f0052fe503e 219 SMART SM00862 145 216 4.4E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS30610 b7aea892c6318d4809cdb7b057b56539 256 PIRSF PIRSF039085 1 254 1.3E-103 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL504_RS30610 b7aea892c6318d4809cdb7b057b56539 256 SUPERFAMILY SSF52540 5 248 1.77E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30610 b7aea892c6318d4809cdb7b057b56539 256 Gene3D G3DSA:3.40.50.300 1 255 1.6E-71 T 28-03-2018 AL504_RS30610 b7aea892c6318d4809cdb7b057b56539 256 SMART SM00382 29 241 2.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30610 b7aea892c6318d4809cdb7b057b56539 256 TIGRFAM TIGR03005 ectoine_ehuA: ectoine/hydroxyectoine ABC transporter, ATP-binding protein EhuA 5 254 8.3E-106 T 28-03-2018 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein AL504_RS30610 b7aea892c6318d4809cdb7b057b56539 256 Pfam PF00005 ABC transporter 20 177 1.0E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS30610 b7aea892c6318d4809cdb7b057b56539 256 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 SUPERFAMILY SSF46689 215 262 3.3E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 Pfam PF01965 DJ-1/PfpI family 8 174 1.7E-15 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 Gene3D G3DSA:1.10.10.60 270 317 7.5E-10 T 28-03-2018 AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 Gene3D G3DSA:3.40.50.880 2 229 3.0E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 SUPERFAMILY SSF46689 265 315 7.17E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 SMART SM00342 228 311 2.0E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 Gene3D G3DSA:1.10.10.60 230 269 4.7E-11 T 28-03-2018 AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 Pfam PF12833 Helix-turn-helix domain 234 312 1.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS18865 8e47251497e1d6b3327612c21ed18acb 318 SUPERFAMILY SSF52317 6 193 3.25E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS21515 6830103ec78b3416c202693a4537b2b9 287 SUPERFAMILY SSF53850 90 283 1.99E-32 T 28-03-2018 AL504_RS21515 6830103ec78b3416c202693a4537b2b9 287 Gene3D G3DSA:1.10.10.10 1 87 5.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21515 6830103ec78b3416c202693a4537b2b9 287 Pfam PF03466 LysR substrate binding domain 89 277 5.2E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21515 6830103ec78b3416c202693a4537b2b9 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.3E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21515 6830103ec78b3416c202693a4537b2b9 287 Gene3D G3DSA:3.40.190.10 88 222 1.3E-18 T 28-03-2018 AL504_RS21515 6830103ec78b3416c202693a4537b2b9 287 SUPERFAMILY SSF46785 1 111 4.02E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02760 ba61aecbb8ec1d1eaa623c8067fb068f 431 PIRSF PIRSF001434 1 431 4.2E-130 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS02760 ba61aecbb8ec1d1eaa623c8067fb068f 431 SUPERFAMILY SSF53383 9 429 1.46E-130 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS02760 ba61aecbb8ec1d1eaa623c8067fb068f 431 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS02760 ba61aecbb8ec1d1eaa623c8067fb068f 431 Gene3D G3DSA:3.40.640.10 9 295 1.2E-61 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS02760 ba61aecbb8ec1d1eaa623c8067fb068f 431 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 11 429 8.4E-197 T 28-03-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 AL504_RS02760 ba61aecbb8ec1d1eaa623c8067fb068f 431 Gene3D G3DSA:3.90.1150.10 297 431 1.9E-49 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS02760 ba61aecbb8ec1d1eaa623c8067fb068f 431 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 428 1.9E-141 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS08370 927b99e839c4e5d5b699a66e8e979aac 83 Pfam PF04380 Membrane fusogenic activity 4 75 1.8E-25 T 28-03-2018 IPR007475 Membrane fusogenic activity AL504_RS08370 927b99e839c4e5d5b699a66e8e979aac 83 Gene3D G3DSA:1.20.120.330 3 83 6.5E-5 T 28-03-2018 AL504_RS04425 3f650af0731685031ae15e4bcd46eb08 375 Gene3D G3DSA:3.20.20.70 28 375 2.4E-128 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS04425 3f650af0731685031ae15e4bcd46eb08 375 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 26 370 7.9E-154 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL504_RS04425 3f650af0731685031ae15e4bcd46eb08 375 PIRSF PIRSF001361 14 373 4.0E-160 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL504_RS04425 3f650af0731685031ae15e4bcd46eb08 375 SUPERFAMILY SSF51569 27 369 5.68E-132 T 28-03-2018 AL504_RS04425 3f650af0731685031ae15e4bcd46eb08 375 Pfam PF00793 DAHP synthetase I family 60 355 9.6E-100 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL504_RS00465 4ccffe19fabd4c490dbc78c4372b9ed1 190 SUPERFAMILY SSF52540 134 179 1.22E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00465 4ccffe19fabd4c490dbc78c4372b9ed1 190 SUPERFAMILY SSF52540 4 106 1.22E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00465 4ccffe19fabd4c490dbc78c4372b9ed1 190 Gene3D G3DSA:3.40.50.300 1 183 4.1E-18 T 28-03-2018 AL504_RS02170 9fba1c1d559215f223986aead5e7d7f9 135 SUPERFAMILY SSF54593 6 130 5.64E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS02170 9fba1c1d559215f223986aead5e7d7f9 135 Gene3D G3DSA:3.10.180.10 5 135 4.3E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS03460 5f37dea3cbfafe1cd6a2cccf82ded684 118 Pfam PF04234 CopC domain 21 116 2.9E-23 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AL504_RS03460 5f37dea3cbfafe1cd6a2cccf82ded684 118 SUPERFAMILY SSF81296 20 117 5.74E-26 T 28-03-2018 IPR014756 Immunoglobulin E-set AL504_RS03460 5f37dea3cbfafe1cd6a2cccf82ded684 118 Gene3D G3DSA:2.60.40.1220 20 117 3.5E-27 T 28-03-2018 AL504_RS15850 1cf8b0826d47640810dd94db21d880ae 299 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 214 289 8.0E-14 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS15850 1cf8b0826d47640810dd94db21d880ae 299 SUPERFAMILY SSF74653 180 289 1.7E-18 T 28-03-2018 AL504_RS15850 1cf8b0826d47640810dd94db21d880ae 299 Gene3D G3DSA:3.30.1150.10 63 298 1.4E-20 T 28-03-2018 AL504_RS15850 1cf8b0826d47640810dd94db21d880ae 299 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 213 289 2.0E-12 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS13625 6025c629bb049ece415180b25f245095 695 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 693 7.2E-76 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS13625 6025c629bb049ece415180b25f245095 695 Pfam PF00593 TonB dependent receptor 258 693 4.7E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS13625 6025c629bb049ece415180b25f245095 695 Gene3D G3DSA:2.170.130.10 24 155 2.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS13625 6025c629bb049ece415180b25f245095 695 SUPERFAMILY SSF56935 24 694 4.71E-103 T 28-03-2018 AL504_RS13625 6025c629bb049ece415180b25f245095 695 Gene3D G3DSA:2.40.170.20 156 694 1.4E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS13625 6025c629bb049ece415180b25f245095 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 152 1.8E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS15730 14e67e0db6d64ec24cfb0b0560815dd8 213 Pfam PF07382 Histone H1-like nucleoprotein HC2 49 212 1.1E-27 T 28-03-2018 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 AL504_RS15730 14e67e0db6d64ec24cfb0b0560815dd8 213 Pfam PF07382 Histone H1-like nucleoprotein HC2 1 157 1.8E-23 T 28-03-2018 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 AL504_RS11255 35084d9e49444281f42d9c575a2e0ad5 243 SUPERFAMILY SSF55811 69 229 1.9E-36 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS11255 35084d9e49444281f42d9c575a2e0ad5 243 Pfam PF00293 NUDIX domain 78 158 1.0E-14 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS11255 35084d9e49444281f42d9c575a2e0ad5 243 Gene3D G3DSA:3.90.79.10 47 238 1.1E-41 T 28-03-2018 AL504_RS23445 65ca92503bc15c24d90124993abdabb8 188 Gene3D G3DSA:3.90.950.20 13 184 6.1E-54 T 28-03-2018 AL504_RS23445 65ca92503bc15c24d90124993abdabb8 188 SUPERFAMILY SSF142433 22 181 1.44E-51 T 28-03-2018 IPR008136 CinA, C-terminal AL504_RS23445 65ca92503bc15c24d90124993abdabb8 188 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 30 178 1.4E-40 T 28-03-2018 IPR008136 CinA, C-terminal AL504_RS23445 65ca92503bc15c24d90124993abdabb8 188 Pfam PF02464 Competence-damaged protein 25 180 7.7E-54 T 28-03-2018 IPR008136 CinA, C-terminal AL504_RS25860 ad5b7fbce9a9a82c9aac46d885e5c18a 215 Pfam PF00994 Probable molybdopterin binding domain 19 162 2.1E-28 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25860 ad5b7fbce9a9a82c9aac46d885e5c18a 215 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 17 161 7.9E-34 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25860 ad5b7fbce9a9a82c9aac46d885e5c18a 215 Gene3D G3DSA:3.40.980.10 10 203 6.7E-39 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25860 ad5b7fbce9a9a82c9aac46d885e5c18a 215 SMART SM00852 18 168 5.9E-23 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS25860 ad5b7fbce9a9a82c9aac46d885e5c18a 215 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 80 93 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL504_RS25860 ad5b7fbce9a9a82c9aac46d885e5c18a 215 SUPERFAMILY SSF53218 15 203 1.11E-44 T 28-03-2018 IPR001453 MoaB/Mog domain AL504_RS00125 c6cb614a7cd6e7594edce389999a693c 90 SUPERFAMILY SSF47598 2 42 3.95E-11 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL504_RS00125 c6cb614a7cd6e7594edce389999a693c 90 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 2.5E-7 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AL504_RS00125 c6cb614a7cd6e7594edce389999a693c 90 Gene3D G3DSA:1.10.1220.10 1 46 4.0E-8 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS17210 e607c161b6eb2b1074af2875e0c17782 477 SUPERFAMILY SSF53383 75 375 1.44E-43 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS17210 e607c161b6eb2b1074af2875e0c17782 477 Pfam PF03841 L-seryl-tRNA selenium transferase 83 453 2.4E-162 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AL504_RS17210 e607c161b6eb2b1074af2875e0c17782 477 Pfam PF12390 Selenocysteine synthase N terminal 9 46 1.1E-7 T 28-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AL504_RS17210 e607c161b6eb2b1074af2875e0c17782 477 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 466 1.4E-179 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AL504_RS17210 e607c161b6eb2b1074af2875e0c17782 477 Gene3D G3DSA:3.40.640.10 95 354 3.6E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS17210 e607c161b6eb2b1074af2875e0c17782 477 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 471 236.933 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AL504_RS12495 2feffeadd767204e95edf9229ecbce02 749 Pfam PF00593 TonB dependent receptor 256 748 1.2E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12495 2feffeadd767204e95edf9229ecbce02 749 Gene3D G3DSA:2.170.130.10 48 186 5.7E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12495 2feffeadd767204e95edf9229ecbce02 749 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 747 7.4E-81 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS12495 2feffeadd767204e95edf9229ecbce02 749 Gene3D G3DSA:2.40.170.20 192 749 1.1E-79 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12495 2feffeadd767204e95edf9229ecbce02 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 178 8.0E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12495 2feffeadd767204e95edf9229ecbce02 749 SUPERFAMILY SSF56935 70 749 5.5E-124 T 28-03-2018 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 Gene3D G3DSA:1.10.10.60 235 283 1.1E-10 T 28-03-2018 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 Gene3D G3DSA:1.10.10.60 177 234 8.2E-13 T 28-03-2018 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 Gene3D G3DSA:2.60.120.280 38 162 2.5E-6 T 28-03-2018 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 SUPERFAMILY SSF51215 47 160 6.54E-5 T 28-03-2018 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 276 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 SUPERFAMILY SSF46689 181 231 9.41E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 SMART SM00342 198 280 1.5E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 Pfam PF12852 Cupin 6 163 8.8E-29 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 Pfam PF12833 Helix-turn-helix domain 204 281 5.9E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24870 8d4931c2ddc85398a9de456445f93cad 285 SUPERFAMILY SSF46689 234 282 4.93E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.7E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.7E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.7E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.7E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.7E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.7E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 Gene3D G3DSA:3.40.50.720 48 253 3.2E-62 T 28-03-2018 AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 Gene3D G3DSA:3.40.50.10090 2 47 6.8E-7 T 28-03-2018 AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 8.0E-56 T 28-03-2018 AL504_RS00260 09bf4d5b375e91f3f575278c32228d31 253 SUPERFAMILY SSF51735 9 252 1.47E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS25625 1022c3fc5fb9bfc52cd2cc966afb669f 98 Pfam PF04221 RelB antitoxin 4 53 4.7E-15 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AL504_RS25625 1022c3fc5fb9bfc52cd2cc966afb669f 98 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 4 67 2.0E-15 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AL504_RS13210 caeb979d02cd59f1262024b69cef426d 112 Pfam PF12778 PXPV repeat (3 copies) 37 56 1.0E-5 T 28-03-2018 IPR024446 PXPV repeat AL504_RS13210 caeb979d02cd59f1262024b69cef426d 112 Pfam PF12778 PXPV repeat (3 copies) 57 76 0.0021 T 28-03-2018 IPR024446 PXPV repeat AL504_RS18470 d14d48a4fe87d8109d3357c489ccae02 485 Pfam PF06097 Bacterial protein of unknown function (DUF945) 8 473 2.4E-79 T 28-03-2018 IPR010352 Protein of unknown function DUF945 AL504_RS18600 547fd8026c66c2876b9db6ff9e93e24b 151 SUPERFAMILY SSF69635 49 142 5.1E-7 T 28-03-2018 AL504_RS18600 547fd8026c66c2876b9db6ff9e93e24b 151 Pfam PF05932 Tir chaperone protein (CesT) family 49 128 3.8E-6 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL504_RS18600 547fd8026c66c2876b9db6ff9e93e24b 151 Gene3D G3DSA:3.30.1460.10 4 146 6.7E-19 T 28-03-2018 AL504_RS25125 f1f0a9ca84f86744572b884774516542 140 PIRSF PIRSF039020 1 122 1.6E-45 T 28-03-2018 IPR026275 Glyoxalase/dioxygenase/EhpR AL504_RS25125 f1f0a9ca84f86744572b884774516542 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 115 7.9E-6 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS25125 f1f0a9ca84f86744572b884774516542 140 SUPERFAMILY SSF54593 6 130 2.06E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS25125 f1f0a9ca84f86744572b884774516542 140 Gene3D G3DSA:3.10.180.10 4 120 1.2E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS18940 b28a1c24e0bacafe3d3297a2b85318f2 260 Gene3D G3DSA:3.40.190.10 30 158 9.4E-30 T 28-03-2018 AL504_RS18940 b28a1c24e0bacafe3d3297a2b85318f2 260 SMART SM00062 35 255 4.4E-43 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS18940 b28a1c24e0bacafe3d3297a2b85318f2 260 Gene3D G3DSA:3.40.190.10 159 260 1.4E-9 T 28-03-2018 AL504_RS18940 b28a1c24e0bacafe3d3297a2b85318f2 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 2.0E-50 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS18940 b28a1c24e0bacafe3d3297a2b85318f2 260 SUPERFAMILY SSF53850 7 255 5.44E-56 T 28-03-2018 AL504_RS21160 ed81c52747aa03932c24d6aa3361d657 383 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 377 6.8E-132 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL504_RS21160 ed81c52747aa03932c24d6aa3361d657 383 PIRSF PIRSF000267 7 381 4.0E-116 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL504_RS21160 ed81c52747aa03932c24d6aa3361d657 383 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 12 367 1.8E-102 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL504_RS30250 4be4d65a597b3f662a7c64c47adddb45 267 Gene3D G3DSA:3.90.850.10 1 267 4.3E-46 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS30250 4be4d65a597b3f662a7c64c47adddb45 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 266 8.8E-133 T 28-03-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 AL504_RS30250 4be4d65a597b3f662a7c64c47adddb45 267 SUPERFAMILY SSF56529 2 266 9.03E-76 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS30250 4be4d65a597b3f662a7c64c47adddb45 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 264 6.4E-8 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 SUPERFAMILY SSF56801 12 300 1.96E-113 T 28-03-2018 AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 SUPERFAMILY SSF56801 352 614 1.96E-113 T 28-03-2018 AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 Gene3D G3DSA:2.30.38.10 403 475 1.1E-20 T 28-03-2018 AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 Gene3D G3DSA:3.30.300.30 477 618 1.3E-4 T 28-03-2018 AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 Gene3D G3DSA:3.40.50.980 203 402 6.9E-36 T 28-03-2018 AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 Pfam PF00501 AMP-binding enzyme 25 482 2.9E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS20880 e9c6e75ac6f85194eaa8cf5009a76cc9 658 Gene3D G3DSA:3.40.50.980 13 202 5.7E-40 T 28-03-2018 AL504_RS02915 1dffad602e099a53f43cbd2affea0873 319 Gene3D G3DSA:3.40.190.10 89 176 8.2E-20 T 28-03-2018 AL504_RS02915 1dffad602e099a53f43cbd2affea0873 319 SUPERFAMILY SSF53850 90 297 4.34E-42 T 28-03-2018 AL504_RS02915 1dffad602e099a53f43cbd2affea0873 319 Pfam PF03466 LysR substrate binding domain 89 294 8.0E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS02915 1dffad602e099a53f43cbd2affea0873 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02915 1dffad602e099a53f43cbd2affea0873 319 Gene3D G3DSA:1.10.10.10 3 84 6.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02915 1dffad602e099a53f43cbd2affea0873 319 Gene3D G3DSA:3.40.190.10 177 267 1.4E-23 T 28-03-2018 AL504_RS02915 1dffad602e099a53f43cbd2affea0873 319 SUPERFAMILY SSF46785 4 111 2.47E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00365 7abb60699b5151756f42bae7fc7114d4 498 Pfam PF00171 Aldehyde dehydrogenase family 32 490 4.0E-152 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS00365 7abb60699b5151756f42bae7fc7114d4 498 Gene3D G3DSA:3.40.605.10 18 285 4.2E-90 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS00365 7abb60699b5151756f42bae7fc7114d4 498 SUPERFAMILY SSF53720 19 493 2.49E-154 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS00365 7abb60699b5151756f42bae7fc7114d4 498 Gene3D G3DSA:3.40.309.10 286 476 1.7E-64 T 28-03-2018 AL504_RS06975 44c7cbf09b12188a8d9a78b5473f98ea 478 Gene3D G3DSA:3.40.605.10 1 263 8.2E-97 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS06975 44c7cbf09b12188a8d9a78b5473f98ea 478 Pfam PF00171 Aldehyde dehydrogenase family 12 474 6.8E-159 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS06975 44c7cbf09b12188a8d9a78b5473f98ea 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS06975 44c7cbf09b12188a8d9a78b5473f98ea 478 Gene3D G3DSA:3.40.309.10 264 460 4.1E-64 T 28-03-2018 AL504_RS06975 44c7cbf09b12188a8d9a78b5473f98ea 478 SUPERFAMILY SSF53720 3 477 1.7E-157 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS28830 b4af4cb31337df277d87accad77b67e6 272 Gene3D G3DSA:3.40.190.10 37 165 3.6E-31 T 28-03-2018 AL504_RS28830 b4af4cb31337df277d87accad77b67e6 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 260 1.2E-48 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS28830 b4af4cb31337df277d87accad77b67e6 272 Gene3D G3DSA:3.40.190.10 166 260 2.4E-7 T 28-03-2018 AL504_RS28830 b4af4cb31337df277d87accad77b67e6 272 SMART SM00062 42 262 1.3E-40 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS28830 b4af4cb31337df277d87accad77b67e6 272 SUPERFAMILY SSF53850 17 262 1.86E-54 T 28-03-2018 AL504_RS21810 71e2a477d266d9c9601bf9f1b070c327 123 Pfam PF07769 psiF repeat 48 79 1.1E-15 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AL504_RS21810 71e2a477d266d9c9601bf9f1b070c327 123 Pfam PF07769 psiF repeat 90 122 6.2E-18 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AL504_RS25600 4af8357eccf8fa9e19a4b2749fa66c68 103 Gene3D G3DSA:1.10.260.40 15 92 1.1E-10 T 28-03-2018 AL504_RS25600 4af8357eccf8fa9e19a4b2749fa66c68 103 Pfam PF13744 Helix-turn-helix domain 11 89 5.2E-27 T 28-03-2018 AL504_RS25600 4af8357eccf8fa9e19a4b2749fa66c68 103 SUPERFAMILY SSF47413 18 92 3.64E-20 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS25600 4af8357eccf8fa9e19a4b2749fa66c68 103 SMART SM00530 31 87 0.0041 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 Gene3D G3DSA:3.40.50.10490 137 247 1.2E-31 T 28-03-2018 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 Gene3D G3DSA:3.40.50.10490 248 500 5.6E-86 T 28-03-2018 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 512 32.011 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 250 268 3.4E-41 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 453 471 3.4E-41 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 485 498 3.4E-41 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 327 348 3.4E-41 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 471 485 3.4E-41 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 141 160 3.4E-41 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 Pfam PF00342 Phosphoglucose isomerase 67 530 1.1E-132 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 SUPERFAMILY SSF53697 44 540 1.35E-142 T 28-03-2018 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 485 502 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 Gene3D G3DSA:3.40.50.10490 18 136 1.3E-11 T 28-03-2018 AL504_RS28490 445b0a247d2f5c9fd5142b01a8be9521 557 Gene3D G3DSA:1.10.1390.10 501 548 4.7E-15 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL504_RS11380 ef8372427dfff5fc279f00cb78703642 234 Pfam PF12836 Helix-hairpin-helix motif 53 109 2.1E-13 T 28-03-2018 AL504_RS11380 ef8372427dfff5fc279f00cb78703642 234 SUPERFAMILY SSF47781 48 113 4.0E-16 T 28-03-2018 IPR010994 RuvA domain 2-like AL504_RS11380 ef8372427dfff5fc279f00cb78703642 234 Gene3D G3DSA:1.10.150.310 71 172 6.2E-12 T 28-03-2018 AL504_RS11380 ef8372427dfff5fc279f00cb78703642 234 SMART SM00278 93 112 85.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS11380 ef8372427dfff5fc279f00cb78703642 234 SMART SM00278 62 81 0.68 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL504_RS11380 ef8372427dfff5fc279f00cb78703642 234 Gene3D G3DSA:1.10.150.20 24 70 2.7E-5 T 28-03-2018 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 TIGRFAM TIGR00433 bioB: biotin synthase 27 323 1.7E-123 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 Hamap MF_01694 Biotin synthase [bioB]. 18 326 42.26 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 Pfam PF04055 Radical SAM superfamily 63 216 1.6E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 SMART SM00876 233 325 2.6E-47 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 SMART SM00729 56 268 1.3E-39 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 233 323 7.3E-19 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 SUPERFAMILY SSF102114 20 324 2.22E-95 T 28-03-2018 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 PIRSF PIRSF001619 10 332 1.3E-132 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL504_RS25515 c4d476b641bf19ec20ac684d21e7e25a 341 Gene3D G3DSA:3.20.20.70 17 328 6.8E-57 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS18010 a078e5257b37773dcd12ebf83250a308 246 Pfam PF00977 Histidine biosynthesis protein 3 232 1.2E-78 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AL504_RS18010 a078e5257b37773dcd12ebf83250a308 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 8.6E-77 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL504_RS18010 a078e5257b37773dcd12ebf83250a308 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.247 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL504_RS18010 a078e5257b37773dcd12ebf83250a308 246 SUPERFAMILY SSF51366 1 238 1.57E-74 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS18010 a078e5257b37773dcd12ebf83250a308 246 Gene3D G3DSA:3.20.20.70 2 244 7.1E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS25750 fcfb68cb96f4fb58f4adecc5d3eead7d 155 SUPERFAMILY SSF52038 41 128 2.35E-18 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) AL504_RS25750 fcfb68cb96f4fb58f4adecc5d3eead7d 155 Pfam PF01337 Barstar (barnase inhibitor) 43 123 3.9E-21 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) AL504_RS25750 fcfb68cb96f4fb58f4adecc5d3eead7d 155 Gene3D G3DSA:3.30.370.10 39 135 3.5E-15 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) AL504_RS13685 a1f770c9a3a7463c9ab5316983654175 368 PRINTS PR00184 Neisseria sp. porin signature 59 84 4.3E-6 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS13685 a1f770c9a3a7463c9ab5316983654175 368 PRINTS PR00184 Neisseria sp. porin signature 157 174 4.3E-6 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS13685 a1f770c9a3a7463c9ab5316983654175 368 PRINTS PR00184 Neisseria sp. porin signature 317 341 4.3E-6 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS13685 a1f770c9a3a7463c9ab5316983654175 368 SUPERFAMILY SSF56935 29 368 4.27E-60 T 28-03-2018 AL504_RS13685 a1f770c9a3a7463c9ab5316983654175 368 Gene3D G3DSA:2.40.160.10 29 368 8.2E-57 T 28-03-2018 AL504_RS13685 a1f770c9a3a7463c9ab5316983654175 368 Pfam PF13609 Gram-negative porin 6 343 3.8E-49 T 28-03-2018 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 Gene3D G3DSA:1.10.10.60 4 24 0.0042 T 28-03-2018 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 Pfam PF13377 Periplasmic binding protein-like domain 174 331 5.3E-33 T 28-03-2018 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 Gene3D G3DSA:3.40.50.2300 180 313 2.0E-36 T 28-03-2018 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 SMART SM00354 8 78 2.0E-22 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 SUPERFAMILY SSF47413 8 66 3.94E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 SUPERFAMILY SSF53822 66 318 1.73E-64 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 Gene3D G3DSA:3.40.50.2300 61 179 1.4E-34 T 28-03-2018 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 1.2E-10 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL504_RS18555 58336b4ea40d443c6b10d65626b086d3 337 Gene3D G3DSA:1.10.260.40 25 60 5.7E-19 T 28-03-2018 AL504_RS04620 66685da50d0804b45282d5f9ab3315e8 283 SUPERFAMILY SSF161098 4 279 1.96E-59 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04620 66685da50d0804b45282d5f9ab3315e8 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 1.1E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04620 66685da50d0804b45282d5f9ab3315e8 283 Gene3D G3DSA:1.10.3720.10 2 272 7.8E-33 T 28-03-2018 AL504_RS24930 b8d8147834f2b57ef598c5d8c3065cf5 136 Gene3D G3DSA:2.60.40.1180 20 87 0.001 T 28-03-2018 AL504_RS24930 b8d8147834f2b57ef598c5d8c3065cf5 136 SUPERFAMILY SSF81901 45 120 3.53E-7 T 28-03-2018 AL504_RS16125 511c699efafa6ef107ba23c0118877f4 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 329 2.2E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16125 511c699efafa6ef107ba23c0118877f4 332 PIRSF PIRSF017082 4 332 1.7E-84 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16125 511c699efafa6ef107ba23c0118877f4 332 Gene3D G3DSA:3.40.190.10 131 262 2.3E-11 T 28-03-2018 AL504_RS16125 511c699efafa6ef107ba23c0118877f4 332 SUPERFAMILY SSF53850 121 293 8.54E-11 T 28-03-2018 AL504_RS02080 5cbfc9be3ec70a158d94b2fc55b6050c 210 SMART SM00903 19 171 9.3E-25 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS02080 5cbfc9be3ec70a158d94b2fc55b6050c 210 SUPERFAMILY SSF50475 3 192 9.81E-46 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS02080 5cbfc9be3ec70a158d94b2fc55b6050c 210 Gene3D G3DSA:2.30.110.10 9 187 1.5E-46 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS02080 5cbfc9be3ec70a158d94b2fc55b6050c 210 Pfam PF01613 Flavin reductase like domain 22 163 3.9E-19 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS22310 3acc9fdafcfb558892edf0559cb2ee79 722 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 722 8.6E-81 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS22310 3acc9fdafcfb558892edf0559cb2ee79 722 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 155 2.5E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS22310 3acc9fdafcfb558892edf0559cb2ee79 722 Gene3D G3DSA:2.170.130.10 18 162 2.6E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS22310 3acc9fdafcfb558892edf0559cb2ee79 722 Pfam PF00593 TonB dependent receptor 233 720 2.6E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS22310 3acc9fdafcfb558892edf0559cb2ee79 722 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 705 722 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS22310 3acc9fdafcfb558892edf0559cb2ee79 722 SUPERFAMILY SSF56935 24 722 6.99E-116 T 28-03-2018 AL504_RS22310 3acc9fdafcfb558892edf0559cb2ee79 722 Gene3D G3DSA:2.40.170.20 169 722 7.0E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 Gene3D G3DSA:1.10.10.10 2 72 5.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 4.0E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 Pfam PF07702 UTRA domain 102 231 6.5E-24 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 SUPERFAMILY SSF64288 61 236 7.69E-33 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 SUPERFAMILY SSF46785 1 82 6.92E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 3 236 3.4E-71 T 28-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 SMART SM00866 94 233 4.8E-22 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 9.2E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 9.2E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 Gene3D G3DSA:3.40.1410.10 73 237 8.0E-28 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS25950 ed8850c6d47cf5ff65b4065e6409084b 240 SMART SM00345 14 73 1.2E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 SUPERFAMILY SSF46785 1 103 8.57E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 Pfam PF03466 LysR substrate binding domain 87 292 9.8E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 Gene3D G3DSA:1.10.10.10 1 85 8.0E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 Gene3D G3DSA:3.40.190.10 86 181 4.1E-18 T 28-03-2018 AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 Gene3D G3DSA:3.40.190.10 182 264 4.2E-9 T 28-03-2018 AL504_RS21580 572a552991ee49cf52a8b1a5546f64bc 296 SUPERFAMILY SSF53850 88 293 1.34E-28 T 28-03-2018 AL504_RS21885 8e1fb373a5e902cf7ebaf6df80d82e69 185 SUPERFAMILY SSF55729 14 177 4.88E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS21885 8e1fb373a5e902cf7ebaf6df80d82e69 185 Pfam PF13420 Acetyltransferase (GNAT) domain 14 168 5.5E-22 T 28-03-2018 AL504_RS21885 8e1fb373a5e902cf7ebaf6df80d82e69 185 Gene3D G3DSA:3.40.630.30 9 184 2.7E-35 T 28-03-2018 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 SUPERFAMILY SSF46689 283 334 1.16E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 SMART SM00342 248 330 9.8E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 Pfam PF12833 Helix-turn-helix domain 256 331 8.6E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 283 326 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 Gene3D G3DSA:1.10.10.60 83 114 0.028 T 28-03-2018 AL504_RS01400 bc8ab9131fd57ccd5853fc229f53b524 344 Gene3D G3DSA:1.10.10.60 284 339 2.2E-11 T 28-03-2018 AL504_RS18760 3944d0d50ebd82f59f15ddb566da2540 354 Pfam PF01636 Phosphotransferase enzyme family 35 284 4.9E-50 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AL504_RS18760 3944d0d50ebd82f59f15ddb566da2540 354 SUPERFAMILY SSF56112 16 338 9.62E-59 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS18760 3944d0d50ebd82f59f15ddb566da2540 354 Gene3D G3DSA:3.90.1200.10 113 302 5.1E-33 T 28-03-2018 AL504_RS18760 3944d0d50ebd82f59f15ddb566da2540 354 Gene3D G3DSA:3.30.200.20 15 112 2.4E-28 T 28-03-2018 AL504_RS17315 d2f12bb5002bfed6e034b9ea0d4c0107 321 Gene3D G3DSA:3.40.190.10 31 138 3.4E-17 T 28-03-2018 AL504_RS17315 d2f12bb5002bfed6e034b9ea0d4c0107 321 Pfam PF09084 NMT1/THI5 like 62 256 1.5E-17 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS17315 d2f12bb5002bfed6e034b9ea0d4c0107 321 SUPERFAMILY SSF53850 35 273 2.04E-55 T 28-03-2018 AL504_RS17315 d2f12bb5002bfed6e034b9ea0d4c0107 321 Gene3D G3DSA:3.40.190.10 139 320 3.1E-35 T 28-03-2018 AL504_RS17315 d2f12bb5002bfed6e034b9ea0d4c0107 321 SMART SM00062 36 267 3.9E-30 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS17315 d2f12bb5002bfed6e034b9ea0d4c0107 321 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 37 314 5.0E-74 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AL504_RS00495 2758b299b5791e27330d2f748bc16467 337 Pfam PF04773 FecR protein 135 225 3.5E-14 T 28-03-2018 IPR006860 FecR protein AL504_RS00495 2758b299b5791e27330d2f748bc16467 337 Pfam PF16220 Domain of unknown function (DUF4880) 28 70 8.6E-10 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS00495 2758b299b5791e27330d2f748bc16467 337 PIRSF PIRSF018266 17 337 1.0E-63 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS28355 ecd2c2edf10e1bcd4a83167f322c9aa3 182 SUPERFAMILY SSF54637 11 155 8.96E-21 T 28-03-2018 IPR029069 HotDog domain AL504_RS28355 ecd2c2edf10e1bcd4a83167f322c9aa3 182 Gene3D G3DSA:3.10.129.10 5 167 8.4E-22 T 28-03-2018 AL504_RS28355 ecd2c2edf10e1bcd4a83167f322c9aa3 182 Pfam PF14539 Domain of unknown function (DUF4442) 20 155 2.8E-16 T 28-03-2018 IPR027961 Protein of unknown function DUF4442 AL504_RS23025 94871f1de3d447e6b831fdc182744d60 469 SUPERFAMILY SSF75304 3 455 8.9E-116 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS23025 94871f1de3d447e6b831fdc182744d60 469 Pfam PF01425 Amidase 25 446 1.6E-79 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS23025 94871f1de3d447e6b831fdc182744d60 469 Gene3D G3DSA:3.90.1300.10 1 468 8.1E-115 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS21150 b8b5fe0dde19ef36c0e357f9c320d384 181 Pfam PF12802 MarR family 26 80 5.0E-7 T 28-03-2018 AL504_RS21150 b8b5fe0dde19ef36c0e357f9c320d384 181 SUPERFAMILY SSF46785 4 149 2.85E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21150 b8b5fe0dde19ef36c0e357f9c320d384 181 Gene3D G3DSA:1.10.10.10 3 172 2.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21150 b8b5fe0dde19ef36c0e357f9c320d384 181 PIRSF PIRSF006707 1 174 4.3E-55 T 28-03-2018 IPR026282 DNA-binding protein, MJ1563 type AL504_RS25480 f6c78449033007caf49c240c1e9efd66 162 Pfam PF01967 MoaC family 19 154 1.0E-47 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL504_RS25480 f6c78449033007caf49c240c1e9efd66 162 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 6 162 32.368 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AL504_RS25480 f6c78449033007caf49c240c1e9efd66 162 Gene3D G3DSA:3.30.70.640 6 162 3.8E-62 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL504_RS25480 f6c78449033007caf49c240c1e9efd66 162 SUPERFAMILY SSF55040 15 159 1.28E-55 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL504_RS25480 f6c78449033007caf49c240c1e9efd66 162 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 8 156 1.4E-54 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AL504_RS23310 7289e606f78518be9900b2d846432205 346 Pfam PF06250 Protein of unknown function (DUF1016) 21 331 5.9E-123 T 28-03-2018 IPR009362 Protein of unknown function DUF1016 AL504_RS07325 d7f5b3286a7246efd634824ba72e3448 199 Pfam PF01323 DSBA-like thioredoxin domain 3 195 3.9E-34 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL504_RS07325 d7f5b3286a7246efd634824ba72e3448 199 Gene3D G3DSA:3.40.30.10 1 199 7.2E-38 T 28-03-2018 AL504_RS07325 d7f5b3286a7246efd634824ba72e3448 199 PIRSF PIRSF006386 1 199 1.2E-52 T 28-03-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590 AL504_RS07325 d7f5b3286a7246efd634824ba72e3448 199 SUPERFAMILY SSF52833 3 198 3.98E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS15520 7ced0555192e5ab8e7d044603607a5a9 641 Pfam PF08298 PrkA AAA domain 21 377 2.2E-173 T 28-03-2018 IPR013153 PrkA AAA domain AL504_RS15520 7ced0555192e5ab8e7d044603607a5a9 641 PIRSF PIRSF000549 1 641 1.0E-294 T 28-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AL504_RS15520 7ced0555192e5ab8e7d044603607a5a9 641 SMART SM00763 20 377 8.7E-218 T 28-03-2018 IPR013153 PrkA AAA domain AL504_RS15520 7ced0555192e5ab8e7d044603607a5a9 641 Gene3D G3DSA:3.40.50.300 64 351 5.5E-9 T 28-03-2018 AL504_RS15520 7ced0555192e5ab8e7d044603607a5a9 641 SUPERFAMILY SSF52540 76 346 8.9E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15520 7ced0555192e5ab8e7d044603607a5a9 641 Pfam PF06798 PrkA serine protein kinase C-terminal domain 380 633 1.7E-73 T 28-03-2018 IPR010650 PrkA C-terminal domain AL504_RS20705 6a9d30f9d741bd48387da89acfaf9088 328 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 323 8.3E-102 T 28-03-2018 IPR007296 Domain of unknown function DUF403 AL504_RS03825 4e74d4be883ba37f945f40a5b6f03ccb 400 SUPERFAMILY SSF53383 29 399 1.58E-103 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03825 4e74d4be883ba37f945f40a5b6f03ccb 400 Gene3D G3DSA:3.40.640.10 11 265 8.5E-61 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS03825 4e74d4be883ba37f945f40a5b6f03ccb 400 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 399 1.1E-123 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03825 4e74d4be883ba37f945f40a5b6f03ccb 400 PIRSF PIRSF001434 1 400 2.1E-137 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03825 4e74d4be883ba37f945f40a5b6f03ccb 400 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 206 220 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS03825 4e74d4be883ba37f945f40a5b6f03ccb 400 Gene3D G3DSA:3.90.1150.10 267 400 1.1E-41 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 SMART SM00382 32 232 5.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 SMART SM00382 291 486 1.6E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 SUPERFAMILY SSF52540 6 234 1.64E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 Pfam PF00005 ABC transporter 283 437 3.8E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 Pfam PF00005 ABC transporter 23 176 9.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 Gene3D G3DSA:3.40.50.300 4 251 1.3E-49 T 28-03-2018 AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 Gene3D G3DSA:3.40.50.300 252 508 2.2E-35 T 28-03-2018 AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 SUPERFAMILY SSF52540 267 496 2.66E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26965 fbc720fef6d5a9f37d2119a6c2054d83 515 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 7 506 2.9E-234 T 28-03-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 AL504_RS24330 6e80c0cf22452158a8a549f95a6e7254 289 SUPERFAMILY SSF53448 1 210 1.29E-14 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS24330 6e80c0cf22452158a8a549f95a6e7254 289 Gene3D G3DSA:3.90.550.10 18 240 3.4E-11 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS30095 4f1a865dac4d6089304545c6cc5f4f66 132 SUPERFAMILY SSF51182 55 116 2.97E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS30095 4f1a865dac4d6089304545c6cc5f4f66 132 Gene3D G3DSA:2.60.120.10 23 131 4.1E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS30095 4f1a865dac4d6089304545c6cc5f4f66 132 Pfam PF07883 Cupin domain 55 115 5.2E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS07350 70d8dae7c1113b3358a3c61c4e52c62c 269 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 8 250 5.4E-80 T 28-03-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 AL504_RS07350 70d8dae7c1113b3358a3c61c4e52c62c 269 SUPERFAMILY SSF56112 33 250 4.96E-30 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS07350 70d8dae7c1113b3358a3c61c4e52c62c 269 Gene3D G3DSA:3.90.1200.10 76 244 1.7E-10 T 28-03-2018 AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 SUPERFAMILY SSF54211 8 189 1.67E-22 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 418 510 7.0E-28 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 306 320 9.8E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 228 243 9.8E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 334 347 9.8E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 358 370 9.8E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 510 3.5E-153 T 28-03-2018 IPR004482 Mg chelatase-related protein AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 SUPERFAMILY SSF52540 210 512 1.7E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 SMART SM00382 229 409 5.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 160 5.5E-34 T 28-03-2018 AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 Pfam PF01078 Magnesium chelatase, subunit ChlI 210 410 6.7E-90 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 Gene3D G3DSA:3.40.50.300 208 471 7.8E-22 T 28-03-2018 AL504_RS08365 d648d4dbccc470e01cd57f78a04f5d30 514 Gene3D G3DSA:3.30.230.10 2 188 3.0E-36 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL504_RS18920 74cbcd35eb99df7df26f8ad05fd600b6 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 316 1.0E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS18920 74cbcd35eb99df7df26f8ad05fd600b6 321 PIRSF PIRSF017082 1 320 8.5E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS18920 74cbcd35eb99df7df26f8ad05fd600b6 321 Gene3D G3DSA:3.40.190.10 120 260 2.3E-7 T 28-03-2018 AL504_RS18920 74cbcd35eb99df7df26f8ad05fd600b6 321 SUPERFAMILY SSF53850 86 284 1.99E-10 T 28-03-2018 AL504_RS16100 72a6147ba08c1844ccb61630e9880662 288 SUPERFAMILY SSF52540 30 194 4.67E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16100 72a6147ba08c1844ccb61630e9880662 288 Pfam PF05673 Protein of unknown function (DUF815) 35 286 7.1E-105 T 28-03-2018 IPR008533 Domain of unknown function DUF815 AL504_RS16100 72a6147ba08c1844ccb61630e9880662 288 Gene3D G3DSA:3.40.50.300 68 200 7.3E-14 T 28-03-2018 AL504_RS07525 001b58a0b167108fc2b28ae7d75073ca 173 SUPERFAMILY SSF52833 30 170 6.62E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS07525 001b58a0b167108fc2b28ae7d75073ca 173 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS07525 001b58a0b167108fc2b28ae7d75073ca 173 Pfam PF08534 Redoxin 36 154 1.1E-15 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL504_RS07525 001b58a0b167108fc2b28ae7d75073ca 173 Gene3D G3DSA:3.40.30.10 30 173 1.8E-27 T 28-03-2018 AL504_RS07525 001b58a0b167108fc2b28ae7d75073ca 173 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 170 1.8E-54 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL504_RS22430 edc8cc8494dc393b09c4b34f127066fa 192 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 64 171 2.4E-24 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS22430 edc8cc8494dc393b09c4b34f127066fa 192 Gene3D G3DSA:3.40.80.10 5 183 1.3E-49 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS22430 edc8cc8494dc393b09c4b34f127066fa 192 SUPERFAMILY SSF55846 16 180 2.49E-60 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS22430 edc8cc8494dc393b09c4b34f127066fa 192 SMART SM00644 22 170 4.9E-45 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL504_RS12910 53eddd13f690077f6199553639e1b0d7 709 Gene3D G3DSA:2.170.130.10 31 179 2.7E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12910 53eddd13f690077f6199553639e1b0d7 709 Gene3D G3DSA:2.40.170.20 185 709 1.8E-64 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12910 53eddd13f690077f6199553639e1b0d7 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 173 1.1E-6 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12910 53eddd13f690077f6199553639e1b0d7 709 Pfam PF00593 TonB dependent receptor 242 708 1.2E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12910 53eddd13f690077f6199553639e1b0d7 709 SUPERFAMILY SSF56935 31 709 1.08E-86 T 28-03-2018 AL504_RS13725 ab84fdccd7a632722e7945f8102b9ce9 79 Pfam PF02954 Bacterial regulatory protein, Fis family 38 72 1.7E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS13725 ab84fdccd7a632722e7945f8102b9ce9 79 Gene3D G3DSA:1.10.10.60 1 78 8.5E-18 T 28-03-2018 AL504_RS13725 ab84fdccd7a632722e7945f8102b9ce9 79 PIRSF PIRSF002097 1 78 1.3E-26 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL504_RS13725 ab84fdccd7a632722e7945f8102b9ce9 79 SUPERFAMILY SSF46689 9 77 1.36E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS13725 ab84fdccd7a632722e7945f8102b9ce9 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 1.3E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS13725 ab84fdccd7a632722e7945f8102b9ce9 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 1.3E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS14310 5a76a21e35a257592c4c7a84d16a987a 299 Gene3D G3DSA:1.10.10.10 1 85 6.9E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14310 5a76a21e35a257592c4c7a84d16a987a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.7E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14310 5a76a21e35a257592c4c7a84d16a987a 299 Pfam PF03466 LysR substrate binding domain 89 296 3.1E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14310 5a76a21e35a257592c4c7a84d16a987a 299 Gene3D G3DSA:3.40.190.10 90 176 2.0E-22 T 28-03-2018 AL504_RS14310 5a76a21e35a257592c4c7a84d16a987a 299 Gene3D G3DSA:3.40.190.10 177 266 1.4E-18 T 28-03-2018 AL504_RS14310 5a76a21e35a257592c4c7a84d16a987a 299 SUPERFAMILY SSF46785 2 112 1.54E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14310 5a76a21e35a257592c4c7a84d16a987a 299 SUPERFAMILY SSF53850 90 297 3.65E-41 T 28-03-2018 AL504_RS07120 a2459782cfbf0313bb72a5e2d93d7caa 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 311 7.9E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07120 a2459782cfbf0313bb72a5e2d93d7caa 313 Gene3D G3DSA:1.10.3720.10 1 300 8.3E-48 T 28-03-2018 AL504_RS07120 a2459782cfbf0313bb72a5e2d93d7caa 313 SUPERFAMILY SSF161098 94 297 6.28E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13870 80a9424b08f4f51c5585275cc124c979 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 1.1E-22 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13870 80a9424b08f4f51c5585275cc124c979 326 SMART SM00382 33 232 2.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS13870 80a9424b08f4f51c5585275cc124c979 326 SUPERFAMILY SSF52540 4 253 5.98E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13870 80a9424b08f4f51c5585275cc124c979 326 Pfam PF00005 ABC transporter 24 182 1.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS13870 80a9424b08f4f51c5585275cc124c979 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 298 3.0E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS13870 80a9424b08f4f51c5585275cc124c979 326 Gene3D G3DSA:3.40.50.300 1 326 2.6E-77 T 28-03-2018 AL504_RS13870 80a9424b08f4f51c5585275cc124c979 326 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 131 149 1.4E-27 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 105 127 1.4E-27 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 21 38 1.4E-27 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 81 101 1.4E-27 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 Hamap MF_00821 Protein-export protein SecB [secB]. 1 153 30.953 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 SUPERFAMILY SSF54611 7 149 1.24E-46 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 Gene3D G3DSA:3.10.420.10 9 161 5.1E-47 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 15 148 4.1E-43 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS21370 bbac7d9196196cfa1aa5a7c47ffc5656 177 Pfam PF02556 Preprotein translocase subunit SecB 14 151 1.7E-50 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL504_RS07600 7ffa19107dec7635abc8714e978ed6ed 177 Pfam PF08534 Redoxin 36 160 5.5E-16 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL504_RS07600 7ffa19107dec7635abc8714e978ed6ed 177 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS07600 7ffa19107dec7635abc8714e978ed6ed 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 169 3.4E-53 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL504_RS07600 7ffa19107dec7635abc8714e978ed6ed 177 Gene3D G3DSA:3.40.30.10 27 174 1.2E-29 T 28-03-2018 AL504_RS07600 7ffa19107dec7635abc8714e978ed6ed 177 SUPERFAMILY SSF52833 40 168 1.46E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 Gene3D G3DSA:1.10.10.10 1 86 5.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 Gene3D G3DSA:3.40.190.10 87 172 3.0E-15 T 28-03-2018 AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 SUPERFAMILY SSF46785 1 110 5.99E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 SUPERFAMILY SSF53850 89 290 6.4E-29 T 28-03-2018 AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 Pfam PF03466 LysR substrate binding domain 87 288 5.2E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS14160 6941727f52a8bb487a3be2aefbfabd10 297 Gene3D G3DSA:3.40.190.10 173 262 8.7E-10 T 28-03-2018 AL504_RS17460 ab3364cb2ce3f8f11b3516e320a17523 781 Pfam PF00577 Outer membrane usher protein 208 397 2.8E-6 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17460 ab3364cb2ce3f8f11b3516e320a17523 781 Pfam PF00577 Outer membrane usher protein 478 688 7.6E-22 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AL504_RS17460 ab3364cb2ce3f8f11b3516e320a17523 781 Pfam PF13953 PapC C-terminal domain 700 756 1.2E-8 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AL504_RS02965 2ec175319b3b39ef2a05f23dd6cf6127 286 Gene3D G3DSA:3.40.190.10 24 188 6.6E-34 T 28-03-2018 AL504_RS02965 2ec175319b3b39ef2a05f23dd6cf6127 286 SMART SM00062 35 260 1.8E-34 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS02965 2ec175319b3b39ef2a05f23dd6cf6127 286 SUPERFAMILY SSF53850 31 257 1.75E-41 T 28-03-2018 AL504_RS02965 2ec175319b3b39ef2a05f23dd6cf6127 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 256 3.3E-36 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS23820 6cb263d9a4749c2df86550b6eaea55a5 203 SUPERFAMILY SSF52738 16 198 1.23E-51 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS23820 6cb263d9a4749c2df86550b6eaea55a5 203 Pfam PF01339 CheB methylesterase 18 193 1.3E-51 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS23820 6cb263d9a4749c2df86550b6eaea55a5 203 Gene3D G3DSA:3.40.50.180 7 203 1.3E-61 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL504_RS31365 12ba4fb46aaf00a8e0c152da5c94e65f 269 Gene3D G3DSA:3.40.50.10070 18 237 9.5E-6 T 28-03-2018 AL504_RS16270 898021ea64c72677cb2fad7f451dfa63 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 175 361 7.7E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16270 898021ea64c72677cb2fad7f451dfa63 367 Gene3D G3DSA:1.10.3720.10 28 367 3.4E-39 T 28-03-2018 AL504_RS16270 898021ea64c72677cb2fad7f451dfa63 367 SUPERFAMILY SSF161098 156 347 1.96E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16270 898021ea64c72677cb2fad7f451dfa63 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 157 253 2.1E-18 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS09460 3f890ef9844a821fe4bb2a35d89c7a61 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 3.1E-47 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS09460 3f890ef9844a821fe4bb2a35d89c7a61 156 Gene3D G3DSA:3.40.1280.10 1 155 3.3E-50 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL504_RS09460 3f890ef9844a821fe4bb2a35d89c7a61 156 SUPERFAMILY SSF75217 2 154 1.88E-46 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL504_RS09460 3f890ef9844a821fe4bb2a35d89c7a61 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.116 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS09460 3f890ef9844a821fe4bb2a35d89c7a61 156 PIRSF PIRSF004505 1 155 7.6E-44 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL504_RS27345 77f13dca40437016e1bbbb8500a860d0 502 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 476 2.3E-100 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS27345 77f13dca40437016e1bbbb8500a860d0 502 Pfam PF02321 Outer membrane efflux protein 292 474 1.6E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS27345 77f13dca40437016e1bbbb8500a860d0 502 Pfam PF02321 Outer membrane efflux protein 76 246 1.0E-19 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS27345 77f13dca40437016e1bbbb8500a860d0 502 SUPERFAMILY SSF56954 13 479 1.44E-97 T 28-03-2018 AL504_RS27345 77f13dca40437016e1bbbb8500a860d0 502 Gene3D G3DSA:1.20.1600.10 31 482 2.2E-85 T 28-03-2018 AL504_RS24130 b52abd4ee4c04cbb47c9b0f1890bb8fb 108 SUPERFAMILY SSF46785 3 94 2.19E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24130 b52abd4ee4c04cbb47c9b0f1890bb8fb 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.6E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24130 b52abd4ee4c04cbb47c9b0f1890bb8fb 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.6E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24130 b52abd4ee4c04cbb47c9b0f1890bb8fb 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.6E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24130 b52abd4ee4c04cbb47c9b0f1890bb8fb 108 SMART SM00418 9 88 1.3E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS24130 b52abd4ee4c04cbb47c9b0f1890bb8fb 108 Gene3D G3DSA:1.10.10.10 1 97 4.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24130 b52abd4ee4c04cbb47c9b0f1890bb8fb 108 Pfam PF12840 Helix-turn-helix domain 10 69 6.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 246 7.8E-37 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 293 43.375 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 Gene3D G3DSA:3.40.50.620 3 114 1.1E-31 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 272 1.9E-110 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.5E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 1.5E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 1.5E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.5E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.5E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 Gene3D G3DSA:3.40.50.620 115 232 6.8E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS18985 8c5f676335d36569cdda57a8b4e2ffe4 293 SUPERFAMILY SSF52374 3 268 7.7E-77 T 28-03-2018 AL504_RS18915 3fac13e469ee3ca44887b5be25ba6c7f 397 SUPERFAMILY SSF53383 14 391 2.93E-110 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS18915 3fac13e469ee3ca44887b5be25ba6c7f 397 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS18915 3fac13e469ee3ca44887b5be25ba6c7f 397 Pfam PF00202 Aminotransferase class-III 20 388 2.6E-101 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS18915 3fac13e469ee3ca44887b5be25ba6c7f 397 Gene3D G3DSA:3.40.640.10 45 282 8.0E-71 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS18915 3fac13e469ee3ca44887b5be25ba6c7f 397 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 392 40.623 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL504_RS18915 3fac13e469ee3ca44887b5be25ba6c7f 397 PIRSF PIRSF000521 19 394 2.3E-39 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS18915 3fac13e469ee3ca44887b5be25ba6c7f 397 Gene3D G3DSA:3.90.1150.10 283 397 5.5E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS13875 fefe5be5b0ae6328e20143a9f5687869 304 Gene3D G3DSA:1.10.3720.10 10 293 7.6E-38 T 28-03-2018 AL504_RS13875 fefe5be5b0ae6328e20143a9f5687869 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 303 5.0E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS13875 fefe5be5b0ae6328e20143a9f5687869 304 SUPERFAMILY SSF161098 87 292 9.16E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16835 7b05b7e44e2cd019c6f8626ebce4e42f 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 304 3.9E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16835 7b05b7e44e2cd019c6f8626ebce4e42f 305 SUPERFAMILY SSF161098 99 292 1.7E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16835 7b05b7e44e2cd019c6f8626ebce4e42f 305 Gene3D G3DSA:1.10.3720.10 24 296 1.7E-43 T 28-03-2018 AL504_RS16835 7b05b7e44e2cd019c6f8626ebce4e42f 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 67 2.1E-5 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS26005 bb080bacf76c06b9b612415d3f9ffc13 299 SUPERFAMILY SSF63829 7 293 3.76E-50 T 28-03-2018 AL504_RS26005 bb080bacf76c06b9b612415d3f9ffc13 299 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 17 270 1.1E-44 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AL504_RS26005 bb080bacf76c06b9b612415d3f9ffc13 299 Gene3D G3DSA:2.120.10.30 2 299 4.2E-33 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS12330 2d478627ca3cc45a994d7d7f2bc133ff 327 Gene3D G3DSA:1.10.3470.10 12 309 2.2E-39 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS12330 2d478627ca3cc45a994d7d7f2bc133ff 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 302 2.2E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS27125 d6e1a14e07223a1d98600bf1e7088663 246 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 235 9.6E-98 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL504_RS27125 d6e1a14e07223a1d98600bf1e7088663 246 SUPERFAMILY SSF63892 1 238 1.07E-93 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL504_RS27125 d6e1a14e07223a1d98600bf1e7088663 246 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 236 5.5E-88 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL504_RS27125 d6e1a14e07223a1d98600bf1e7088663 246 Gene3D G3DSA:3.20.20.70 2 235 2.2E-98 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS27125 d6e1a14e07223a1d98600bf1e7088663 246 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 240 125.518 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL504_RS02535 d046dcd1f94447adcbd6befee7720c73 231 Gene3D G3DSA:3.30.1060.10 47 220 2.0E-61 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS02535 d046dcd1f94447adcbd6befee7720c73 231 SUPERFAMILY SSF55068 39 212 4.97E-66 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS02535 d046dcd1f94447adcbd6befee7720c73 231 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 49 199 2.6E-50 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS02535 d046dcd1f94447adcbd6befee7720c73 231 Pfam PF01625 Peptide methionine sulfoxide reductase 50 202 3.1E-56 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS02535 d046dcd1f94447adcbd6befee7720c73 231 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 48 208 35.494 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 Gene3D G3DSA:3.30.565.10 1 228 3.8E-54 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PIRSF PIRSF002583 1 629 8.1E-216 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 SUPERFAMILY SSF110942 516 628 2.62E-34 T 28-03-2018 AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 SUPERFAMILY SSF55874 7 217 4.71E-68 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 Pfam PF00183 Hsp90 protein 217 627 2.3E-129 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 628 32.709 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 SMART SM00387 30 185 1.9E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 183 3.1E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 SUPERFAMILY SSF54211 235 490 5.46E-99 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PRINTS PR00775 90kDa heat shock protein signature 78 95 5.4E-60 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PRINTS PR00775 90kDa heat shock protein signature 8 28 5.4E-60 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PRINTS PR00775 90kDa heat shock protein signature 191 209 5.4E-60 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PRINTS PR00775 90kDa heat shock protein signature 96 113 5.4E-60 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PRINTS PR00775 90kDa heat shock protein signature 29 51 5.4E-60 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PRINTS PR00775 90kDa heat shock protein signature 173 190 5.4E-60 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL504_RS22290 94bcca91ba202567c777bbe913aeea44 629 PRINTS PR00775 90kDa heat shock protein signature 123 145 5.4E-60 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL504_RS07345 4583aba179ae0fc1ad1c270728ebb971 148 SUPERFAMILY SSF55811 4 125 2.17E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS07345 4583aba179ae0fc1ad1c270728ebb971 148 PRINTS PR00502 NUDIX hydrolase family signature 50 65 4.6E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL504_RS07345 4583aba179ae0fc1ad1c270728ebb971 148 PRINTS PR00502 NUDIX hydrolase family signature 36 50 4.6E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL504_RS07345 4583aba179ae0fc1ad1c270728ebb971 148 Pfam PF00293 NUDIX domain 12 122 1.2E-21 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS07345 4583aba179ae0fc1ad1c270728ebb971 148 Gene3D G3DSA:3.90.79.10 1 145 6.6E-32 T 28-03-2018 AL504_RS30535 271168f978eed53e59b638a032b083a1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.9E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30535 271168f978eed53e59b638a032b083a1 305 Gene3D G3DSA:3.40.190.10 92 182 1.7E-11 T 28-03-2018 AL504_RS30535 271168f978eed53e59b638a032b083a1 305 SUPERFAMILY SSF53850 92 295 1.18E-34 T 28-03-2018 AL504_RS30535 271168f978eed53e59b638a032b083a1 305 SUPERFAMILY SSF46785 2 83 7.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30535 271168f978eed53e59b638a032b083a1 305 Pfam PF03466 LysR substrate binding domain 93 296 3.2E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS30535 271168f978eed53e59b638a032b083a1 305 Gene3D G3DSA:1.10.10.10 2 89 6.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30535 271168f978eed53e59b638a032b083a1 305 Gene3D G3DSA:3.40.190.10 183 269 4.4E-15 T 28-03-2018 AL504_RS14370 b88cd091c419f93e5d452f11665d4513 380 Gene3D G3DSA:3.40.640.10 12 269 7.4E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS14370 b88cd091c419f93e5d452f11665d4513 380 PIRSF PIRSF000524 1 373 9.2E-52 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AL504_RS14370 b88cd091c419f93e5d452f11665d4513 380 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 368 122.179 T 28-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL504_RS14370 b88cd091c419f93e5d452f11665d4513 380 Pfam PF00266 Aminotransferase class-V 28 301 2.9E-21 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS14370 b88cd091c419f93e5d452f11665d4513 380 SUPERFAMILY SSF53383 2 363 4.95E-71 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS14370 b88cd091c419f93e5d452f11665d4513 380 Gene3D G3DSA:3.90.1150.10 270 373 2.4E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS23835 4fdcfc454f838f5191ba0acd82902e88 139 Pfam PF00072 Response regulator receiver domain 1 107 3.5E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23835 4fdcfc454f838f5191ba0acd82902e88 139 SUPERFAMILY SSF52172 1 113 9.53E-27 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS23835 4fdcfc454f838f5191ba0acd82902e88 139 Gene3D G3DSA:3.40.50.2300 1 138 3.0E-25 T 28-03-2018 AL504_RS23835 4fdcfc454f838f5191ba0acd82902e88 139 SMART SM00448 1 108 1.7E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS13630 958ee4d933970490f4dbe0993cea0c2c 416 Pfam PF07690 Major Facilitator Superfamily 24 304 2.2E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS13630 958ee4d933970490f4dbe0993cea0c2c 416 SUPERFAMILY SSF103473 8 410 2.22E-32 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS13630 958ee4d933970490f4dbe0993cea0c2c 416 Gene3D G3DSA:1.20.1250.20 209 414 3.0E-16 T 28-03-2018 AL504_RS13630 958ee4d933970490f4dbe0993cea0c2c 416 Gene3D G3DSA:1.20.1250.20 2 205 4.0E-15 T 28-03-2018 AL504_RS20190 e6742953ae358e9b18de1b30cb4abbf2 136 Gene3D G3DSA:1.10.287.620 24 136 3.7E-6 T 28-03-2018 AL504_RS20190 e6742953ae358e9b18de1b30cb4abbf2 136 Pfam PF06476 Protein of unknown function (DUF1090) 25 127 2.9E-32 T 28-03-2018 IPR009468 Protein of unknown function DUF1090 AL504_RS21155 025d114f4aa0d5e1e6d7fdd1d566ccfd 524 PIRSF PIRSF006446 2 325 6.0E-113 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL504_RS21155 025d114f4aa0d5e1e6d7fdd1d566ccfd 524 PIRSF PIRSF006446 337 523 3.3E-39 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL504_RS21155 025d114f4aa0d5e1e6d7fdd1d566ccfd 524 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 7.1E-177 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL504_RS27275 d95493f53197a0a1c33e68eb582c0665 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 116 3.6E-21 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS27275 d95493f53197a0a1c33e68eb582c0665 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 214 2.2E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27275 d95493f53197a0a1c33e68eb582c0665 230 SUPERFAMILY SSF161098 18 208 1.83E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27275 d95493f53197a0a1c33e68eb582c0665 230 Gene3D G3DSA:1.10.3720.10 2 224 1.2E-36 T 28-03-2018 AL504_RS24545 1bd7d598293fa96a55f0a9ebbf3be1a3 744 Gene3D G3DSA:3.40.720.10 118 481 3.2E-21 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS24545 1bd7d598293fa96a55f0a9ebbf3be1a3 744 Pfam PF05506 Domain of unknown function (DUF756) 647 729 1.4E-20 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS24545 1bd7d598293fa96a55f0a9ebbf3be1a3 744 Pfam PF05506 Domain of unknown function (DUF756) 548 636 8.0E-26 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS24545 1bd7d598293fa96a55f0a9ebbf3be1a3 744 Pfam PF04185 Phosphoesterase family 46 476 5.8E-107 T 28-03-2018 IPR007312 Phosphoesterase GO:0016788 AL504_RS24545 1bd7d598293fa96a55f0a9ebbf3be1a3 744 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 743 2.1E-289 T 28-03-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS29975 9e750c3d30c0c4edcd4270ccb9cc5591 307 SUPERFAMILY SSF161098 92 291 3.4E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29975 9e750c3d30c0c4edcd4270ccb9cc5591 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 305 5.4E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29975 9e750c3d30c0c4edcd4270ccb9cc5591 307 Gene3D G3DSA:1.10.3720.10 3 294 9.2E-44 T 28-03-2018 AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 Pfam PF01965 DJ-1/PfpI family 3 171 6.8E-14 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 Pfam PF12833 Helix-turn-helix domain 233 312 5.2E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 Gene3D G3DSA:1.10.10.60 209 263 3.6E-12 T 28-03-2018 AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 SUPERFAMILY SSF52317 1 192 1.53E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 SMART SM00342 227 310 2.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 SUPERFAMILY SSF46689 264 315 4.48E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 SUPERFAMILY SSF46689 211 261 1.65E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 Gene3D G3DSA:3.40.50.880 1 208 4.8E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS04920 94de5c1ff256103d49984ca8f13711fc 332 Gene3D G3DSA:1.10.10.60 264 325 4.7E-11 T 28-03-2018 AL504_RS27320 bde7a1d0e36cae0407f1e4dfcbaef22c 195 Gene3D G3DSA:3.30.460.10 26 193 5.5E-52 T 28-03-2018 AL504_RS27320 bde7a1d0e36cae0407f1e4dfcbaef22c 195 Pfam PF04229 GrpB protein 30 187 1.7E-50 T 28-03-2018 IPR007344 GrpB/Dephospho-CoA kinase AL504_RS27320 bde7a1d0e36cae0407f1e4dfcbaef22c 195 SUPERFAMILY SSF81301 32 190 1.01E-44 T 28-03-2018 AL504_RS12665 49a6fe8794de3ffaa326a5cb787eefd5 656 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 495 3.3E-195 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL504_RS12665 49a6fe8794de3ffaa326a5cb787eefd5 656 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 496 1.1E-158 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL504_RS12665 49a6fe8794de3ffaa326a5cb787eefd5 656 ProSitePatterns PS01303 BCCT family of transporters signature. 314 323 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AL504_RS11920 d4c3f86484c9db8dc599cd83166e9182 326 SUPERFAMILY SSF56235 3 155 4.12E-100 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS11920 d4c3f86484c9db8dc599cd83166e9182 326 SUPERFAMILY SSF56235 190 324 4.12E-100 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS11920 d4c3f86484c9db8dc599cd83166e9182 326 Pfam PF01112 Asparaginase 4 325 6.6E-122 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AL504_RS11920 d4c3f86484c9db8dc599cd83166e9182 326 Gene3D G3DSA:3.60.20.30 193 326 2.9E-47 T 28-03-2018 AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 Gene3D G3DSA:3.40.50.720 152 333 4.3E-35 T 28-03-2018 AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 Gene3D G3DSA:3.90.180.10 2 151 1.2E-54 T 28-03-2018 AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 SMART SM00829 14 338 6.4E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 Pfam PF00107 Zinc-binding dehydrogenase 179 304 3.7E-30 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 SUPERFAMILY SSF51735 143 308 5.64E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 134 8.7E-34 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL504_RS26210 93e8b769b4ac13c78cbb5abbd91effc7 342 SUPERFAMILY SSF50129 2 184 8.52E-56 T 28-03-2018 IPR011032 GroES-like AL504_RS21125 2d298ffab85977f7f36a19bb712f5163 214 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 8 194 21.755 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL504_RS21125 2d298ffab85977f7f36a19bb712f5163 214 Gene3D G3DSA:2.60.450.10 43 191 5.7E-20 T 28-03-2018 AL504_RS21125 2d298ffab85977f7f36a19bb712f5163 214 Pfam PF03968 OstA-like protein 53 170 5.4E-23 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL504_RS21125 2d298ffab85977f7f36a19bb712f5163 214 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 50 193 3.8E-26 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL504_RS18965 93d34c889ce4abd659d684f06e555004 379 Gene3D G3DSA:3.20.20.10 15 266 1.3E-46 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS18965 93d34c889ce4abd659d684f06e555004 379 SMART SM01119 274 362 1.6E-31 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL504_RS18965 93d34c889ce4abd659d684f06e555004 379 Pfam PF01168 Alanine racemase, N-terminal domain 31 257 4.8E-29 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS18965 93d34c889ce4abd659d684f06e555004 379 SUPERFAMILY SSF51419 31 263 1.49E-40 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS18965 93d34c889ce4abd659d684f06e555004 379 Pfam PF14031 Putative serine dehydratase domain 274 360 1.9E-20 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL504_RS29030 b571de895320647988023b5b21513ac8 470 Pfam PF00324 Amino acid permease 17 429 8.2E-101 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AL504_RS29030 b571de895320647988023b5b21513ac8 470 PIRSF PIRSF006060 2 467 3.3E-70 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS12095 599ec04cd09de2e2c51472edc9f30afb 195 Hamap MF_00201 DNA repair protein RecO [recO]. 7 192 13.805 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL504_RS12095 599ec04cd09de2e2c51472edc9f30afb 195 Pfam PF11967 Recombination protein O N terminal 11 81 1.7E-18 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AL504_RS12095 599ec04cd09de2e2c51472edc9f30afb 195 SUPERFAMILY SSF50249 10 82 2.23E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS12095 599ec04cd09de2e2c51472edc9f30afb 195 TIGRFAM TIGR00613 reco: DNA repair protein RecO 15 152 1.8E-18 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL504_RS12095 599ec04cd09de2e2c51472edc9f30afb 195 SUPERFAMILY SSF57863 90 148 1.96E-7 T 28-03-2018 AL504_RS12095 599ec04cd09de2e2c51472edc9f30afb 195 Gene3D G3DSA:2.40.50.140 6 84 2.6E-19 T 28-03-2018 AL504_RS12095 599ec04cd09de2e2c51472edc9f30afb 195 Pfam PF02565 Recombination protein O C terminal 87 151 9.0E-16 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 SUPERFAMILY SSF46785 15 82 2.21E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 Pfam PF01726 LexA DNA binding domain 14 77 2.0E-28 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 Gene3D G3DSA:2.10.109.10 106 223 1.3E-23 T 28-03-2018 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 Pfam PF00717 Peptidase S24-like 140 202 7.3E-16 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 137 147 2.4E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 148 159 2.4E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 176 188 2.4E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 Hamap MF_00015 LexA repressor [lexA]. 15 224 32.194 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 Gene3D G3DSA:1.10.10.10 14 80 3.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 TIGRFAM TIGR00498 lexA: repressor LexA 14 222 1.4E-69 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL504_RS31235 f62df94cf1862bf67739b24be3518f93 227 SUPERFAMILY SSF51306 101 222 2.27E-34 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS11965 2e427a0ddbc52d895a18a309ba206232 114 SUPERFAMILY SSF54909 1 100 5.37E-26 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS11965 2e427a0ddbc52d895a18a309ba206232 114 Gene3D G3DSA:3.30.70.100 1 109 4.2E-18 T 28-03-2018 AL504_RS11965 2e427a0ddbc52d895a18a309ba206232 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 1.1E-12 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 Pfam PF13458 Periplasmic binding protein 26 361 2.9E-60 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 SUPERFAMILY SSF53822 26 360 1.15E-82 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 1.9E-12 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.9E-12 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 280 293 1.9E-12 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.9E-12 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 Gene3D G3DSA:3.40.50.2300 9 149 2.5E-20 T 28-03-2018 AL504_RS15630 60176376b62d1396507829abf1cacdcf 384 Gene3D G3DSA:3.40.50.2300 150 325 3.5E-37 T 28-03-2018 AL504_RS23165 394819f15856807a9ec5381c5f754e0c 237 Gene3D G3DSA:1.10.10.10 129 236 2.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23165 394819f15856807a9ec5381c5f754e0c 237 Gene3D G3DSA:3.40.50.2300 2 128 1.5E-31 T 28-03-2018 AL504_RS23165 394819f15856807a9ec5381c5f754e0c 237 SMART SM00862 157 230 5.0E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS23165 394819f15856807a9ec5381c5f754e0c 237 Pfam PF00072 Response regulator receiver domain 13 121 3.4E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23165 394819f15856807a9ec5381c5f754e0c 237 SMART SM00448 11 123 2.4E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS23165 394819f15856807a9ec5381c5f754e0c 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 4.2E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS23165 394819f15856807a9ec5381c5f754e0c 237 SUPERFAMILY SSF52172 10 178 7.26E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS07850 d4dc3822ee9e595cb77190e0dc46a321 236 SUPERFAMILY SSF46785 157 232 2.63E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07850 d4dc3822ee9e595cb77190e0dc46a321 236 Gene3D G3DSA:2.60.120.10 5 155 5.0E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS07850 d4dc3822ee9e595cb77190e0dc46a321 236 Pfam PF13545 Crp-like helix-turn-helix domain 160 231 6.4E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL504_RS07850 d4dc3822ee9e595cb77190e0dc46a321 236 SMART SM00100 22 143 8.9E-4 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS07850 d4dc3822ee9e595cb77190e0dc46a321 236 Pfam PF00027 Cyclic nucleotide-binding domain 42 126 1.0E-11 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL504_RS07850 d4dc3822ee9e595cb77190e0dc46a321 236 Gene3D G3DSA:1.10.10.10 156 232 3.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07850 d4dc3822ee9e595cb77190e0dc46a321 236 SUPERFAMILY SSF51206 15 151 1.18E-23 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL504_RS29570 961bbec0f14f0fd20a9894eddc938787 310 Pfam PF00795 Carbon-nitrogen hydrolase 3 276 1.2E-49 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS29570 961bbec0f14f0fd20a9894eddc938787 310 Gene3D G3DSA:3.60.110.10 1 297 1.2E-60 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS29570 961bbec0f14f0fd20a9894eddc938787 310 SUPERFAMILY SSF56317 2 297 9.42E-72 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS03495 7a087eb4e40c31de4e138a0530e2901a 270 SUPERFAMILY SSF161098 62 248 4.58E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03495 7a087eb4e40c31de4e138a0530e2901a 270 Gene3D G3DSA:1.10.3720.10 13 261 1.9E-29 T 28-03-2018 AL504_RS03495 7a087eb4e40c31de4e138a0530e2901a 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 254 2.0E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23630 41bda81877bb8e0c17524cf35253157d 283 Pfam PF03466 LysR substrate binding domain 90 281 9.6E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS23630 41bda81877bb8e0c17524cf35253157d 283 SUPERFAMILY SSF46785 3 112 1.36E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23630 41bda81877bb8e0c17524cf35253157d 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23630 41bda81877bb8e0c17524cf35253157d 283 Gene3D G3DSA:3.40.190.10 90 220 1.2E-13 T 28-03-2018 AL504_RS23630 41bda81877bb8e0c17524cf35253157d 283 Gene3D G3DSA:1.10.10.10 2 89 2.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23630 41bda81877bb8e0c17524cf35253157d 283 SUPERFAMILY SSF53850 90 282 8.69E-24 T 28-03-2018 AL504_RS08190 4131f78fc22b514740dbcdd011226074 343 SUPERFAMILY SSF53850 47 282 1.67E-36 T 28-03-2018 AL504_RS08190 4131f78fc22b514740dbcdd011226074 343 Gene3D G3DSA:3.40.190.10 153 341 1.5E-24 T 28-03-2018 AL504_RS08190 4131f78fc22b514740dbcdd011226074 343 SMART SM00062 49 268 0.0021 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS08190 4131f78fc22b514740dbcdd011226074 343 Gene3D G3DSA:3.40.190.10 45 152 3.7E-9 T 28-03-2018 AL504_RS08190 4131f78fc22b514740dbcdd011226074 343 Pfam PF09084 NMT1/THI5 like 63 271 1.3E-17 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS17350 d8fc382b2ed34af80be7267e996e4060 562 Gene3D G3DSA:3.90.76.10 79 182 1.5E-33 T 28-03-2018 AL504_RS17350 d8fc382b2ed34af80be7267e996e4060 562 PIRSF PIRSF002741 23 562 9.7E-139 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS17350 d8fc382b2ed34af80be7267e996e4060 562 Gene3D G3DSA:3.40.190.10 183 325 9.0E-42 T 28-03-2018 AL504_RS17350 d8fc382b2ed34af80be7267e996e4060 562 Gene3D G3DSA:3.10.105.10 326 529 1.3E-47 T 28-03-2018 AL504_RS17350 d8fc382b2ed34af80be7267e996e4060 562 SUPERFAMILY SSF53850 60 559 1.07E-129 T 28-03-2018 AL504_RS17350 d8fc382b2ed34af80be7267e996e4060 562 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 106 462 3.6E-89 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 113 2.7E-9 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 Pfam PF13244 Domain of unknown function (DUF4040) 614 679 6.8E-19 T 28-03-2018 IPR025383 Domain of unknown function DUF4040 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 Pfam PF00361 Proton-conducting membrane transporter 126 406 1.5E-65 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 5.2E-40 T 28-03-2018 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 5.2E-40 T 28-03-2018 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 5.2E-40 T 28-03-2018 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 5.2E-40 T 28-03-2018 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 5.2E-40 T 28-03-2018 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 5.2E-40 T 28-03-2018 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 5.2E-40 T 28-03-2018 AL504_RS05295 be729a6c31eedd879e843190bd3d39d9 971 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 819 940 2.6E-31 T 28-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AL504_RS15175 eed755898bb7b0196298c0c7d3cec566 87 Gene3D G3DSA:1.10.1220.10 29 87 4.9E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS15175 eed755898bb7b0196298c0c7d3cec566 87 Pfam PF01402 Ribbon-helix-helix protein, copG family 51 86 2.8E-4 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AL504_RS22165 99bed277b9a9081683ff3c798beeefa9 242 Pfam PF05100 Phage minor tail protein L 24 239 3.0E-75 T 28-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AL504_RS22165 99bed277b9a9081683ff3c798beeefa9 242 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 239 7.7E-90 T 28-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AL504_RS06935 217299f47ead5a4f4b9804ac7da3ebdc 197 Pfam PF00881 Nitroreductase family 13 172 4.1E-29 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL504_RS06935 217299f47ead5a4f4b9804ac7da3ebdc 197 SUPERFAMILY SSF55469 5 193 9.55E-39 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL504_RS06935 217299f47ead5a4f4b9804ac7da3ebdc 197 PIRSF PIRSF000232 7 196 2.4E-53 T 28-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AL504_RS06935 217299f47ead5a4f4b9804ac7da3ebdc 197 Gene3D G3DSA:3.40.109.10 9 194 2.0E-32 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Pfam PF07676 WD40-like Beta Propeller Repeat 289 325 4.8E-15 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Pfam PF07676 WD40-like Beta Propeller Repeat 208 236 4.5E-8 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Pfam PF07676 WD40-like Beta Propeller Repeat 246 280 8.3E-7 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Pfam PF07676 WD40-like Beta Propeller Repeat 334 367 2.2E-8 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 SUPERFAMILY SSF69304 165 437 1.7E-54 T 28-03-2018 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Gene3D G3DSA:2.60.120.20 293 333 8.6E-16 T 28-03-2018 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Gene3D G3DSA:2.60.120.20 334 370 4.6E-6 T 28-03-2018 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Pfam PF04052 TolB amino-terminal domain 40 139 1.8E-22 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Gene3D G3DSA:2.130.10.150 176 292 2.0E-18 T 28-03-2018 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Gene3D G3DSA:2.140.10.30 371 438 8.5E-6 T 28-03-2018 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 SUPERFAMILY SSF52964 47 172 1.1E-30 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Gene3D G3DSA:3.40.50.10070 39 175 3.0E-30 T 28-03-2018 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 31 436 1.0E-156 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AL504_RS15000 5155053aa8f08393cc0838fdcedca76e 440 Hamap MF_00671 Protein TolB [tolB]. 21 435 33.818 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AL504_RS14430 04027990b058869309f5e9f5f3e68915 232 Gene3D G3DSA:1.20.120.330 54 168 3.5E-6 T 28-03-2018 AL504_RS17185 e809b1443d9fa1140ca320fbac015cf5 365 SUPERFAMILY SSF54001 150 276 1.4E-21 T 28-03-2018 AL504_RS17185 e809b1443d9fa1140ca320fbac015cf5 365 SMART SM00460 203 277 1.3E-15 T 28-03-2018 IPR002931 Transglutaminase-like AL504_RS17185 e809b1443d9fa1140ca320fbac015cf5 365 Gene3D G3DSA:3.90.260.10 195 285 6.6E-4 T 28-03-2018 IPR002931 Transglutaminase-like AL504_RS17185 e809b1443d9fa1140ca320fbac015cf5 365 Pfam PF01841 Transglutaminase-like superfamily 156 275 2.6E-23 T 28-03-2018 IPR002931 Transglutaminase-like AL504_RS22220 8782b67211579398ddb44da2b140be1b 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 298 3.3E-39 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS22220 8782b67211579398ddb44da2b140be1b 314 Gene3D G3DSA:1.10.3470.10 33 307 2.4E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS01700 f152437acbe4beb4a67007dcaf30984e 347 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 334 1.1E-48 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS01700 f152437acbe4beb4a67007dcaf30984e 347 Gene3D G3DSA:3.40.50.1100 58 155 9.7E-31 T 28-03-2018 AL504_RS01700 f152437acbe4beb4a67007dcaf30984e 347 PIRSF PIRSF006278 1 347 4.0E-92 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL504_RS01700 f152437acbe4beb4a67007dcaf30984e 347 SUPERFAMILY SSF53686 11 344 2.74E-73 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS01700 f152437acbe4beb4a67007dcaf30984e 347 Gene3D G3DSA:3.40.50.1100 156 342 4.3E-23 T 28-03-2018 AL504_RS13155 12487c4ebc06277b48d323e4007ac9af 256 Pfam PF03883 Peroxide stress protein YaaA 1 243 7.4E-89 T 28-03-2018 IPR005583 Peroxide stress protein YaaA AL504_RS13155 12487c4ebc06277b48d323e4007ac9af 256 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 34.664 T 28-03-2018 IPR005583 Peroxide stress protein YaaA AL504_RS24760 9cd7c3595a1194c08af5252c27d4f173 167 Gene3D G3DSA:1.10.10.10 78 165 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24760 9cd7c3595a1194c08af5252c27d4f173 167 SUPERFAMILY SSF88946 13 93 6.67E-11 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24760 9cd7c3595a1194c08af5252c27d4f173 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 162 7.7E-24 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24760 9cd7c3595a1194c08af5252c27d4f173 167 Pfam PF04542 Sigma-70 region 2 15 75 7.6E-6 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24760 9cd7c3595a1194c08af5252c27d4f173 167 Gene3D G3DSA:1.10.1740.10 11 77 7.0E-10 T 28-03-2018 AL504_RS24760 9cd7c3595a1194c08af5252c27d4f173 167 Pfam PF08281 Sigma-70, region 4 107 157 1.3E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24760 9cd7c3595a1194c08af5252c27d4f173 167 SUPERFAMILY SSF88659 90 165 6.73E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 Gene3D G3DSA:2.30.40.10 409 485 9.4E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 SUPERFAMILY SSF51556 68 426 1.9E-85 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 Pfam PF07969 Amidohydrolase family 245 470 1.3E-21 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 Pfam PF07969 Amidohydrolase family 57 203 1.3E-16 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 Gene3D G3DSA:2.30.40.10 13 79 8.5E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 SUPERFAMILY SSF51338 15 67 8.55E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 SUPERFAMILY SSF51338 426 484 8.55E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS04565 747f455fa64e960cacd97f6b2434151c 498 Gene3D G3DSA:3.20.20.140 80 408 9.8E-73 T 28-03-2018 AL504_RS18785 72bc2b44baf2b9da33eb0b7dca092815 254 Pfam PF01925 Sulfite exporter TauE/SafE 13 242 3.1E-25 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS29825 1f561438a62d0b84957f0d06526c9fea 398 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS29825 1f561438a62d0b84957f0d06526c9fea 398 Gene3D G3DSA:3.40.640.10 7 261 2.0E-66 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS29825 1f561438a62d0b84957f0d06526c9fea 398 SUPERFAMILY SSF53383 29 395 1.34E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS29825 1f561438a62d0b84957f0d06526c9fea 398 Gene3D G3DSA:3.90.1150.10 262 398 7.9E-48 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS29825 1f561438a62d0b84957f0d06526c9fea 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 393 4.7E-138 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS29825 1f561438a62d0b84957f0d06526c9fea 398 PIRSF PIRSF001434 1 397 4.1E-144 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL504_RS18440 e0162041a2dfe3f7d1b7dc68da42f9cb 456 SUPERFAMILY SSF52540 112 157 1.04E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18440 e0162041a2dfe3f7d1b7dc68da42f9cb 456 SUPERFAMILY SSF52540 4 73 1.04E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18440 e0162041a2dfe3f7d1b7dc68da42f9cb 456 Pfam PF11981 Domain of unknown function (DUF3482) 166 451 1.1E-99 T 28-03-2018 IPR021871 Protein of unknown function DUF3482 AL504_RS18440 e0162041a2dfe3f7d1b7dc68da42f9cb 456 Pfam PF01926 50S ribosome-binding GTPase 8 153 5.1E-17 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS18440 e0162041a2dfe3f7d1b7dc68da42f9cb 456 Gene3D G3DSA:3.40.50.300 1 327 3.3E-26 T 28-03-2018 AL504_RS01210 b34e6edef0de575153c470213e481925 332 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 74 319 4.6E-32 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AL504_RS01210 b34e6edef0de575153c470213e481925 332 Gene3D G3DSA:2.120.10.30 49 150 8.1E-6 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS01210 b34e6edef0de575153c470213e481925 332 Gene3D G3DSA:2.120.10.30 151 330 1.8E-25 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS01210 b34e6edef0de575153c470213e481925 332 SUPERFAMILY SSF63829 63 330 1.18E-43 T 28-03-2018 AL504_RS23090 f152ed9a448d02c4b812b4a7b7108a5c 221 SUPERFAMILY SSF47240 60 194 1.27E-17 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS23090 f152ed9a448d02c4b812b4a7b7108a5c 221 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 20 221 31.094 T 28-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AL504_RS23090 f152ed9a448d02c4b812b4a7b7108a5c 221 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 61 221 1.8E-41 T 28-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AL504_RS23090 f152ed9a448d02c4b812b4a7b7108a5c 221 Gene3D G3DSA:1.20.1260.10 42 194 1.5E-22 T 28-03-2018 IPR012347 Ferritin-related AL504_RS01080 1173124f8bc77c82087de57a08ad3a6b 138 Pfam PF00583 Acetyltransferase (GNAT) family 31 123 1.5E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS01080 1173124f8bc77c82087de57a08ad3a6b 138 Gene3D G3DSA:3.40.630.30 3 131 9.0E-22 T 28-03-2018 AL504_RS01080 1173124f8bc77c82087de57a08ad3a6b 138 SUPERFAMILY SSF55729 2 129 3.55E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS15915 392517a12e374fb787da4eb99d1b65df 434 Pfam PF01979 Amidohydrolase family 273 427 4.9E-7 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS15915 392517a12e374fb787da4eb99d1b65df 434 SUPERFAMILY SSF51338 1 55 3.91E-27 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS15915 392517a12e374fb787da4eb99d1b65df 434 SUPERFAMILY SSF51338 375 431 3.91E-27 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS15915 392517a12e374fb787da4eb99d1b65df 434 Gene3D G3DSA:3.20.20.140 71 358 9.1E-53 T 28-03-2018 AL504_RS15915 392517a12e374fb787da4eb99d1b65df 434 Gene3D G3DSA:2.30.40.10 359 433 6.5E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS15915 392517a12e374fb787da4eb99d1b65df 434 SUPERFAMILY SSF51556 56 364 2.81E-64 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS15915 392517a12e374fb787da4eb99d1b65df 434 Gene3D G3DSA:2.30.40.10 1 70 2.4E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS08265 a9360779faaa6b3bea76212e0ed4f866 332 Gene3D G3DSA:3.40.190.10 131 241 4.7E-7 T 28-03-2018 AL504_RS08265 a9360779faaa6b3bea76212e0ed4f866 332 SUPERFAMILY SSF53850 111 286 1.19E-7 T 28-03-2018 AL504_RS08265 a9360779faaa6b3bea76212e0ed4f866 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 328 9.4E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS08265 a9360779faaa6b3bea76212e0ed4f866 332 PIRSF PIRSF017082 4 332 1.2E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS31295 0616666ab46916f75a27512d565067b1 296 Gene3D G3DSA:3.40.50.1380 15 150 5.0E-13 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS31295 0616666ab46916f75a27512d565067b1 296 Gene3D G3DSA:3.40.50.1380 151 295 6.9E-23 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS31295 0616666ab46916f75a27512d565067b1 296 ProSitePatterns PS01335 Methylglyoxal synthase active site. 222 230 - T 28-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL504_RS31295 0616666ab46916f75a27512d565067b1 296 SUPERFAMILY SSF52335 16 141 2.29E-19 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS31295 0616666ab46916f75a27512d565067b1 296 SUPERFAMILY SSF52335 152 291 5.04E-33 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL504_RS26030 ea5ae91d0d37e24261bfee3858590afc 159 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 154 29.901 T 28-03-2018 IPR033747 Class I PurE AL504_RS26030 ea5ae91d0d37e24261bfee3858590afc 159 Gene3D G3DSA:3.40.50.7700 1 155 8.1E-59 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL504_RS26030 ea5ae91d0d37e24261bfee3858590afc 159 SMART SM01001 1 150 1.1E-84 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL504_RS26030 ea5ae91d0d37e24261bfee3858590afc 159 Pfam PF00731 AIR carboxylase 1 148 4.2E-57 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL504_RS26030 ea5ae91d0d37e24261bfee3858590afc 159 PIRSF PIRSF001338 1 156 3.1E-60 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AL504_RS26030 ea5ae91d0d37e24261bfee3858590afc 159 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 152 1.0E-58 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL504_RS26030 ea5ae91d0d37e24261bfee3858590afc 159 SUPERFAMILY SSF52255 1 155 3.4E-59 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL504_RS23760 6a0db0ccbc789e94dba269d5fb309431 258 Pfam PF07103 Protein of unknown function (DUF1365) 7 251 9.7E-72 T 28-03-2018 IPR010775 Protein of unknown function DUF1365 AL504_RS30130 ccff0dde47f7e2e9817b2528925bcda8 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 105 1.9E-20 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS30130 ccff0dde47f7e2e9817b2528925bcda8 113 Gene3D G3DSA:1.20.1290.10 3 112 8.5E-25 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS30130 ccff0dde47f7e2e9817b2528925bcda8 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 88 3.5E-18 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS30130 ccff0dde47f7e2e9817b2528925bcda8 113 SUPERFAMILY SSF69118 4 107 1.7E-28 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS07750 b0bac71798d1a4deea60a12b79201999 464 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 429 7.3E-76 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS07750 b0bac71798d1a4deea60a12b79201999 464 PIRSF PIRSF006603 7 454 1.4E-59 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS07750 b0bac71798d1a4deea60a12b79201999 464 Pfam PF01554 MatE 22 183 8.1E-30 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS07750 b0bac71798d1a4deea60a12b79201999 464 Pfam PF01554 MatE 250 414 2.7E-26 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS25660 4d7606cd372c5e153ce3f8a9544ceda9 383 Pfam PF13458 Periplasmic binding protein 25 379 1.9E-51 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS25660 4d7606cd372c5e153ce3f8a9544ceda9 383 Gene3D G3DSA:3.40.50.2300 10 144 3.9E-16 T 28-03-2018 AL504_RS25660 4d7606cd372c5e153ce3f8a9544ceda9 383 Gene3D G3DSA:3.40.50.2300 145 312 1.7E-30 T 28-03-2018 AL504_RS25660 4d7606cd372c5e153ce3f8a9544ceda9 383 SUPERFAMILY SSF53822 26 382 2.75E-72 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS09420 f8b377b3b76d1423e4097f7abba5c486 318 Gene3D G3DSA:3.90.1480.10 74 318 8.9E-29 T 28-03-2018 AL504_RS09420 f8b377b3b76d1423e4097f7abba5c486 318 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 77 307 2.0E-10 T 28-03-2018 AL504_RS26680 63d34dec83f46cc0aaf702afb1399b9c 74 Pfam PF07866 Protein of unknown function (DUF1653) 11 68 3.1E-19 T 28-03-2018 IPR023387 DUF1653-like domain AL504_RS26680 63d34dec83f46cc0aaf702afb1399b9c 74 Gene3D G3DSA:2.30.30.320 1 73 2.4E-17 T 28-03-2018 IPR023387 DUF1653-like domain AL504_RS03610 98e3e76cc191055a55fe32c8a53a00c6 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 161 2.5E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03610 98e3e76cc191055a55fe32c8a53a00c6 167 Gene3D G3DSA:1.10.1740.10 9 77 6.3E-10 T 28-03-2018 AL504_RS03610 98e3e76cc191055a55fe32c8a53a00c6 167 Pfam PF08281 Sigma-70, region 4 105 152 5.2E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03610 98e3e76cc191055a55fe32c8a53a00c6 167 Pfam PF04542 Sigma-70 region 2 13 73 3.0E-8 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03610 98e3e76cc191055a55fe32c8a53a00c6 167 SUPERFAMILY SSF88946 11 91 4.32E-9 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03610 98e3e76cc191055a55fe32c8a53a00c6 167 SUPERFAMILY SSF88659 72 163 5.79E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS03610 98e3e76cc191055a55fe32c8a53a00c6 167 Gene3D G3DSA:1.10.10.10 81 166 2.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00105 c8d5f5f531ac1d3d45c6550de8edea7f 87 Pfam PF03167 Uracil DNA glycosylase superfamily 8 71 1.8E-7 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS00105 c8d5f5f531ac1d3d45c6550de8edea7f 87 SUPERFAMILY SSF52141 5 78 1.99E-17 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS00105 c8d5f5f531ac1d3d45c6550de8edea7f 87 Gene3D G3DSA:3.40.470.10 1 82 3.0E-19 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 Gene3D G3DSA:3.30.70.260 319 399 5.1E-8 T 28-03-2018 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 145 172 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 317 5.0E-35 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 Gene3D G3DSA:3.40.50.720 2 128 7.6E-39 T 28-03-2018 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 Gene3D G3DSA:3.40.50.720 129 286 1.2E-45 T 28-03-2018 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 SUPERFAMILY SSF52283 4 125 1.66E-38 T 28-03-2018 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 SUPERFAMILY SSF51735 99 286 8.78E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 SUPERFAMILY SSF55021 325 396 3.32E-11 T 28-03-2018 AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL504_RS16515 25ba48d6d5d4db31626b473805826c1b 399 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 285 7.6E-54 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL504_RS05135 298be6e5392746ce0540e5e1be8e65df 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL504_RS05135 298be6e5392746ce0540e5e1be8e65df 66 Pfam PF00403 Heavy-metal-associated domain 5 62 5.1E-11 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL504_RS05135 298be6e5392746ce0540e5e1be8e65df 66 SUPERFAMILY SSF55008 2 63 1.44E-15 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL504_RS05135 298be6e5392746ce0540e5e1be8e65df 66 Gene3D G3DSA:3.30.70.100 1 66 7.0E-16 T 28-03-2018 AL504_RS01005 d7e510c69a3da029ae41d330ac022f36 324 SUPERFAMILY SSF161098 90 306 1.7E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01005 d7e510c69a3da029ae41d330ac022f36 324 Gene3D G3DSA:1.10.3720.10 2 308 9.3E-41 T 28-03-2018 AL504_RS01005 d7e510c69a3da029ae41d330ac022f36 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 2.4E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS25365 89f8a4ddfb039212c827216fdcadf94a 220 SMART SM00448 1 112 1.5E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS25365 89f8a4ddfb039212c827216fdcadf94a 220 SMART SM00862 145 216 1.7E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS25365 89f8a4ddfb039212c827216fdcadf94a 220 Gene3D G3DSA:1.10.10.10 120 220 7.2E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25365 89f8a4ddfb039212c827216fdcadf94a 220 SUPERFAMILY SSF52172 1 175 5.55E-41 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS25365 89f8a4ddfb039212c827216fdcadf94a 220 Gene3D G3DSA:3.40.50.2300 1 119 3.4E-36 T 28-03-2018 AL504_RS25365 89f8a4ddfb039212c827216fdcadf94a 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 1.1E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS25365 89f8a4ddfb039212c827216fdcadf94a 220 Pfam PF00072 Response regulator receiver domain 4 113 5.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS07790 b0ddd9ba0b0f907bb536f420da5decca 277 SUPERFAMILY SSF117396 17 277 1.57E-70 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS07790 b0ddd9ba0b0f907bb536f420da5decca 277 Gene3D G3DSA:3.20.20.410 5 277 1.4E-79 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS07790 b0ddd9ba0b0f907bb536f420da5decca 277 Pfam PF01904 Protein of unknown function DUF72 34 275 5.4E-58 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL504_RS01055 24be98e73bc03bbaf946a0142b0f4856 328 PIRSF PIRSF017082 1 328 1.3E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01055 24be98e73bc03bbaf946a0142b0f4856 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 324 5.9E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01055 24be98e73bc03bbaf946a0142b0f4856 328 SUPERFAMILY SSF53850 117 290 3.98E-11 T 28-03-2018 AL504_RS01055 24be98e73bc03bbaf946a0142b0f4856 328 Gene3D G3DSA:3.40.190.10 127 256 1.7E-11 T 28-03-2018 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 78 7.5E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 PRINTS PR01249 Ribosomal protein L31 signature 44 59 5.2E-14 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.2E-14 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 PRINTS PR01249 Ribosomal protein L31 signature 59 77 5.2E-14 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 Pfam PF01197 Ribosomal protein L31 1 78 1.3E-27 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 23.384 T 28-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS11170 6a927a9ee8c12778fd7ccdd78fc99c58 88 SUPERFAMILY SSF143800 1 78 5.1E-20 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS03960 9f8b4ebcf9f41e649560a1c9a5d5866e 317 Pfam PF02016 LD-carboxypeptidase 10 297 5.5E-75 T 28-03-2018 IPR003507 Peptidase family S66 AL504_RS03960 9f8b4ebcf9f41e649560a1c9a5d5866e 317 PIRSF PIRSF028757 1 311 7.3E-77 T 28-03-2018 IPR003507 Peptidase family S66 AL504_RS03960 9f8b4ebcf9f41e649560a1c9a5d5866e 317 Gene3D G3DSA:3.50.30.60 160 311 4.3E-38 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AL504_RS03960 9f8b4ebcf9f41e649560a1c9a5d5866e 317 SUPERFAMILY SSF52317 2 154 6.41E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS03960 9f8b4ebcf9f41e649560a1c9a5d5866e 317 SUPERFAMILY SSF141986 169 302 6.02E-36 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AL504_RS03960 9f8b4ebcf9f41e649560a1c9a5d5866e 317 Gene3D G3DSA:3.40.50.10740 1 158 2.3E-49 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AL504_RS27545 4b4c5ec21700a5551894b9cf24586860 229 Gene3D G3DSA:3.40.630.30 14 228 3.7E-18 T 28-03-2018 AL504_RS27545 4b4c5ec21700a5551894b9cf24586860 229 Pfam PF08445 FR47-like protein 137 219 1.3E-16 T 28-03-2018 IPR013653 FR47-like GO:0016747 AL504_RS27545 4b4c5ec21700a5551894b9cf24586860 229 SUPERFAMILY SSF55729 107 220 9.76E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS17560 306da7e2cc33bc6ab77b1e050beda4ab 407 Gene3D G3DSA:1.20.1600.10 117 349 3.8E-19 T 28-03-2018 AL504_RS17560 306da7e2cc33bc6ab77b1e050beda4ab 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 91 322 6.5E-42 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS17560 306da7e2cc33bc6ab77b1e050beda4ab 407 SUPERFAMILY SSF111369 103 326 8.11E-23 T 28-03-2018 AL504_RS17560 306da7e2cc33bc6ab77b1e050beda4ab 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 83 395 4.6E-50 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS28085 efb2106402501fce32ec93946fcff436 169 Gene3D G3DSA:2.40.100.10 1 169 1.9E-51 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS28085 efb2106402501fce32ec93946fcff436 169 PIRSF PIRSF001467 1 169 2.3E-26 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL504_RS28085 efb2106402501fce32ec93946fcff436 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL504_RS28085 efb2106402501fce32ec93946fcff436 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 20 35 6.7E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL504_RS28085 efb2106402501fce32ec93946fcff436 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 6.7E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL504_RS28085 efb2106402501fce32ec93946fcff436 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 138 6.7E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL504_RS28085 efb2106402501fce32ec93946fcff436 169 SUPERFAMILY SSF50891 2 168 3.8E-58 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS28085 efb2106402501fce32ec93946fcff436 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 166 1.5E-46 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL504_RS02700 bcddf4e232fc59619a313e689d3000db 252 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 131 151 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL504_RS02700 bcddf4e232fc59619a313e689d3000db 252 SUPERFAMILY SSF109998 3 108 1.96E-5 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL504_RS02700 bcddf4e232fc59619a313e689d3000db 252 Pfam PF00639 PPIC-type PPIASE domain 99 191 1.0E-18 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AL504_RS02700 bcddf4e232fc59619a313e689d3000db 252 SUPERFAMILY SSF54534 89 195 5.76E-23 T 28-03-2018 AL504_RS02700 bcddf4e232fc59619a313e689d3000db 252 Gene3D G3DSA:3.10.50.40 84 217 1.8E-25 T 28-03-2018 AL504_RS16550 52c409a62b2593be9c33c2cdc05209ce 143 Gene3D G3DSA:3.10.180.10 2 134 3.4E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS16550 52c409a62b2593be9c33c2cdc05209ce 143 SUPERFAMILY SSF54593 10 135 5.77E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS16550 52c409a62b2593be9c33c2cdc05209ce 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 131 3.5E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS27980 e104299458bc95ef7e7b2bab59b35619 186 SUPERFAMILY SSF52218 1 182 1.44E-41 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS27980 e104299458bc95ef7e7b2bab59b35619 186 Pfam PF03358 NADPH-dependent FMN reductase 44 113 1.3E-9 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL504_RS27980 e104299458bc95ef7e7b2bab59b35619 186 Gene3D G3DSA:3.40.50.360 2 186 4.6E-37 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS27980 e104299458bc95ef7e7b2bab59b35619 186 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL504_RS19920 baebb51692edf01ef04369c06c5cac3f 390 Pfam PF13458 Periplasmic binding protein 25 362 1.5E-53 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS19920 baebb51692edf01ef04369c06c5cac3f 390 Gene3D G3DSA:3.40.50.2300 20 202 1.1E-25 T 28-03-2018 AL504_RS19920 baebb51692edf01ef04369c06c5cac3f 390 Gene3D G3DSA:3.40.50.2300 203 354 4.9E-19 T 28-03-2018 AL504_RS19920 baebb51692edf01ef04369c06c5cac3f 390 SUPERFAMILY SSF53822 24 386 1.68E-65 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS10665 a3f4beeb5e76b04205c8e3af2a6dc0bd 396 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 39 385 1.4E-44 T 28-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AL504_RS10665 a3f4beeb5e76b04205c8e3af2a6dc0bd 396 Gene3D G3DSA:1.20.1170.10 19 141 0.22 T 28-03-2018 AL504_RS08280 251ed8bf26473e2ce5f9335b42692f24 144 SUPERFAMILY SSF55729 8 134 3.6E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS08280 251ed8bf26473e2ce5f9335b42692f24 144 Gene3D G3DSA:3.40.630.30 6 140 5.9E-32 T 28-03-2018 AL504_RS08280 251ed8bf26473e2ce5f9335b42692f24 144 Pfam PF00583 Acetyltransferase (GNAT) family 30 128 1.9E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS14620 05e5981b268978fb8f7f6aabdcac3d71 741 SUPERFAMILY SSF74650 14 233 4.71E-27 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL504_RS14620 05e5981b268978fb8f7f6aabdcac3d71 741 Pfam PF01055 Glycosyl hydrolases family 31 228 663 3.0E-76 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AL504_RS14620 05e5981b268978fb8f7f6aabdcac3d71 741 Gene3D G3DSA:2.60.40.1760 16 233 1.7E-29 T 28-03-2018 AL504_RS14620 05e5981b268978fb8f7f6aabdcac3d71 741 SUPERFAMILY SSF51445 236 577 2.28E-40 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS14620 05e5981b268978fb8f7f6aabdcac3d71 741 Gene3D G3DSA:2.60.40.1180 599 659 3.3E-22 T 28-03-2018 AL504_RS14620 05e5981b268978fb8f7f6aabdcac3d71 741 Gene3D G3DSA:3.20.20.80 234 598 9.0E-69 T 28-03-2018 AL504_RS14620 05e5981b268978fb8f7f6aabdcac3d71 741 SUPERFAMILY SSF51011 579 658 3.67E-20 T 28-03-2018 AL504_RS22550 2545140f326053f40f6df72d71941207 452 Pfam PF07690 Major Facilitator Superfamily 273 440 2.5E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS22550 2545140f326053f40f6df72d71941207 452 Gene3D G3DSA:1.20.1250.20 22 250 1.0E-23 T 28-03-2018 AL504_RS22550 2545140f326053f40f6df72d71941207 452 Pfam PF00083 Sugar (and other) transporter 37 254 8.8E-25 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS22550 2545140f326053f40f6df72d71941207 452 Gene3D G3DSA:1.20.1250.20 256 452 3.9E-21 T 28-03-2018 AL504_RS22550 2545140f326053f40f6df72d71941207 452 SUPERFAMILY SSF103473 30 448 2.88E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS12590 cd850202f00ed6017461e91a1789a011 144 SUPERFAMILY SSF51735 4 137 5.8E-16 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS12590 cd850202f00ed6017461e91a1789a011 144 Gene3D G3DSA:3.40.50.720 2 143 2.7E-18 T 28-03-2018 AL504_RS12590 cd850202f00ed6017461e91a1789a011 144 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 134 2.4E-10 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL504_RS19315 5d88798e92373dfe5d31153a47d73b59 234 PIRSF PIRSF006232 1 234 7.6E-43 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL504_RS19315 5d88798e92373dfe5d31153a47d73b59 234 SUPERFAMILY SSF51182 1 231 9.12E-63 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS19315 5d88798e92373dfe5d31153a47d73b59 234 Pfam PF02678 Pirin 10 118 1.3E-27 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL504_RS19315 5d88798e92373dfe5d31153a47d73b59 234 Gene3D G3DSA:2.60.120.10 131 234 1.4E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS19315 5d88798e92373dfe5d31153a47d73b59 234 Gene3D G3DSA:2.60.120.10 11 130 5.2E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS02540 1603e0a281c78d2d5b6afcf7bdd447dc 167 SUPERFAMILY SSF51316 42 166 9.42E-56 T 28-03-2018 IPR011057 Mss4-like AL504_RS02540 1603e0a281c78d2d5b6afcf7bdd447dc 167 Pfam PF01641 SelR domain 47 165 5.1E-50 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL504_RS02540 1603e0a281c78d2d5b6afcf7bdd447dc 167 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 44 166 1.8E-51 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL504_RS02540 1603e0a281c78d2d5b6afcf7bdd447dc 167 Gene3D G3DSA:2.170.150.20 33 167 5.1E-57 T 28-03-2018 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 Gene3D G3DSA:3.40.190.80 172 290 3.1E-31 T 28-03-2018 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 Pfam PF00459 Inositol monophosphatase family 21 288 2.9E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR00377 Inositol monophosphatase superfamily signature 53 73 1.3E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR00377 Inositol monophosphatase superfamily signature 75 91 1.3E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR00377 Inositol monophosphatase superfamily signature 203 224 1.3E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR00377 Inositol monophosphatase superfamily signature 156 179 1.3E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR00377 Inositol monophosphatase superfamily signature 234 258 1.3E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR00377 Inositol monophosphatase superfamily signature 94 110 1.3E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 Gene3D G3DSA:3.30.540.10 7 171 7.6E-46 T 28-03-2018 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 94 107 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR01959 SuhB family inositol monophosphatase signature 224 236 5.8E-13 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR01959 SuhB family inositol monophosphatase signature 130 149 5.8E-13 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 PRINTS PR01959 SuhB family inositol monophosphatase signature 182 208 5.8E-13 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 SUPERFAMILY SSF56655 18 287 2.36E-74 T 28-03-2018 AL504_RS14630 24eb20edfe80155299d7b45e7d7714ae 291 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 237 251 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AL504_RS29655 e15ea07020b9f673b3174337f6db9e03 751 Pfam PF00350 Dynamin family 141 315 8.2E-17 T 28-03-2018 IPR022812 Dynamin superfamily AL504_RS29655 e15ea07020b9f673b3174337f6db9e03 751 SUPERFAMILY SSF52540 133 354 4.73E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29655 e15ea07020b9f673b3174337f6db9e03 751 Gene3D G3DSA:3.40.50.300 37 593 1.2E-28 T 28-03-2018 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 2.4E-31 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 SUPERFAMILY SSF54719 89 202 6.81E-43 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 SUPERFAMILY SSF46609 2 91 6.94E-35 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 Gene3D G3DSA:1.10.287.990 20 90 2.6E-28 T 28-03-2018 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 PIRSF PIRSF000349 1 204 1.4E-77 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 1.8E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.8E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.8E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.8E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 1.8E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS22990 bf4f9bcfa455ad759f8bbfd6d8cb546a 204 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 198 1.5E-36 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 138 155 8.6E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 8.6E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 8.6E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 SUPERFAMILY SSF51569 9 297 3.04E-64 T 28-03-2018 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 Gene3D G3DSA:3.20.20.70 1 301 9.3E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 Pfam PF00701 Dihydrodipicolinate synthetase family 10 297 7.1E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 PIRSF PIRSF001365 6 301 5.8E-50 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13180 feba285b03c68203b8dd72c88bf5aee0 302 SMART SM01130 8 301 1.2E-69 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS13925 afd5ce9e4d8d639149e4e9840210cc1d 391 SUPERFAMILY SSF53901 33 233 2.5E-13 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS13925 afd5ce9e4d8d639149e4e9840210cc1d 391 PIRSF PIRSF000429 20 374 9.0E-13 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS13925 afd5ce9e4d8d639149e4e9840210cc1d 391 Gene3D G3DSA:3.40.47.10 242 386 7.5E-6 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS13925 afd5ce9e4d8d639149e4e9840210cc1d 391 SUPERFAMILY SSF53901 250 373 1.79E-19 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS13925 afd5ce9e4d8d639149e4e9840210cc1d 391 Gene3D G3DSA:3.40.47.10 10 237 1.3E-21 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS10215 0d482400965d89f2dec91cc77df99053 556 PIRSF PIRSF500060 11 531 1.8E-243 T 28-03-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria AL504_RS10215 0d482400965d89f2dec91cc77df99053 556 SUPERFAMILY SSF51395 20 500 5.76E-139 T 28-03-2018 AL504_RS10215 0d482400965d89f2dec91cc77df99053 556 Gene3D G3DSA:3.20.20.70 83 498 2.4E-96 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS10215 0d482400965d89f2dec91cc77df99053 556 Pfam PF01645 Conserved region in glutamate synthase 157 474 3.8E-82 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL504_RS10215 0d482400965d89f2dec91cc77df99053 556 PIRSF PIRSF006429 6 543 3.9E-162 T 28-03-2018 IPR024188 Glutamate synthase large subunit-like protein AL504_RS05930 08dd17bb667b262ed1f3210a03b21af8 306 SMART SM00342 220 302 1.4E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS05930 08dd17bb667b262ed1f3210a03b21af8 306 Gene3D G3DSA:1.10.10.60 258 306 8.9E-8 T 28-03-2018 AL504_RS05930 08dd17bb667b262ed1f3210a03b21af8 306 SUPERFAMILY SSF46689 256 300 8.96E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS05930 08dd17bb667b262ed1f3210a03b21af8 306 Gene3D G3DSA:1.10.10.60 199 257 2.0E-8 T 28-03-2018 AL504_RS05930 08dd17bb667b262ed1f3210a03b21af8 306 Pfam PF12833 Helix-turn-helix domain 226 300 2.5E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS28420 eb125f80c53f7476ff985310d10c487e 296 SUPERFAMILY SSF53448 5 206 9.09E-19 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS28420 eb125f80c53f7476ff985310d10c487e 296 Pfam PF00535 Glycosyl transferase family 2 7 130 1.1E-11 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS28420 eb125f80c53f7476ff985310d10c487e 296 Gene3D G3DSA:3.90.550.10 2 266 1.7E-19 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS02515 6f3fc08372fe5ae85f1651cccfd46700 218 SUPERFAMILY SSF46689 13 84 3.75E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS02515 6f3fc08372fe5ae85f1651cccfd46700 218 Gene3D G3DSA:1.10.260.40 46 93 4.1E-9 T 28-03-2018 AL504_RS02515 6f3fc08372fe5ae85f1651cccfd46700 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 2.5E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS02515 6f3fc08372fe5ae85f1651cccfd46700 218 Gene3D G3DSA:1.10.357.10 94 208 2.3E-13 T 28-03-2018 AL504_RS02515 6f3fc08372fe5ae85f1651cccfd46700 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.0E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS02515 6f3fc08372fe5ae85f1651cccfd46700 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.0E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS02515 6f3fc08372fe5ae85f1651cccfd46700 218 Gene3D G3DSA:1.10.10.60 1 45 6.0E-13 T 28-03-2018 AL504_RS00390 97b542390be63e818eba864c90cbe77e 485 Gene3D G3DSA:3.40.720.10 2 373 2.7E-70 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS00390 97b542390be63e818eba864c90cbe77e 485 Pfam PF00884 Sulfatase 6 345 7.6E-51 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL504_RS00390 97b542390be63e818eba864c90cbe77e 485 SUPERFAMILY SSF53649 4 437 1.74E-102 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS00390 97b542390be63e818eba864c90cbe77e 485 Gene3D G3DSA:3.30.1120.10 374 445 1.6E-14 T 28-03-2018 AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 139 156 2.5E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 156 176 2.5E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 SUPERFAMILY SSF52172 8 147 2.2E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 Gene3D G3DSA:3.40.50.2300 7 123 7.2E-25 T 28-03-2018 AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 SMART SM00448 7 116 2.0E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 Gene3D G3DSA:1.10.10.60 126 171 1.4E-15 T 28-03-2018 AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 Pfam PF00072 Response regulator receiver domain 8 111 1.2E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS25020 9bdbac301583af6dff7a045f4319c301 183 Pfam PF02954 Bacterial regulatory protein, Fis family 136 172 6.5E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 3.3E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 3.3E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 3.3E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 SUPERFAMILY SSF51569 2 297 2.83E-70 T 28-03-2018 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 PIRSF PIRSF001365 1 304 8.7E-60 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 Pfam PF00701 Dihydrodipicolinate synthetase family 6 287 9.2E-49 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 Gene3D G3DSA:3.20.20.70 1 309 1.0E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS24395 bf9622637592194e7ae075e91696df6f 311 SMART SM01130 5 296 2.9E-70 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS07835 2812f10eb71b048bc21ce03e2e22ffc1 761 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 282 726 2.8E-71 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS07835 2812f10eb71b048bc21ce03e2e22ffc1 761 SUPERFAMILY SSF81442 276 750 8.5E-83 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS07835 2812f10eb71b048bc21ce03e2e22ffc1 761 Gene3D G3DSA:1.20.210.10 270 744 2.3E-69 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS13045 4bd1dd40ae15c3114e25d742c5f849d9 210 SUPERFAMILY SSF53335 37 155 3.25E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS13045 4bd1dd40ae15c3114e25d742c5f849d9 210 Gene3D G3DSA:3.40.50.150 5 210 1.2E-13 T 28-03-2018 AL504_RS23475 acaff22d965602d84556da502fe51688 259 Pfam PF00005 ABC transporter 20 175 7.4E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23475 acaff22d965602d84556da502fe51688 259 SUPERFAMILY SSF52540 3 245 7.0E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23475 acaff22d965602d84556da502fe51688 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 244 2.1E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS23475 acaff22d965602d84556da502fe51688 259 Gene3D G3DSA:3.40.50.300 1 256 2.5E-53 T 28-03-2018 AL504_RS23475 acaff22d965602d84556da502fe51688 259 SMART SM00382 28 222 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17275 ca2b702fef482eba6c816ace85c7e90d 71 SUPERFAMILY SSF50331 6 69 1.68E-17 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS17275 ca2b702fef482eba6c816ace85c7e90d 71 Pfam PF03459 TOBE domain 8 67 7.7E-16 T 28-03-2018 IPR005116 Transport-associated OB, type 1 AL504_RS17275 ca2b702fef482eba6c816ace85c7e90d 71 Gene3D G3DSA:2.40.50.100 5 70 1.6E-17 T 28-03-2018 AL504_RS17275 ca2b702fef482eba6c816ace85c7e90d 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 5 69 1.8E-18 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.443 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 Gene3D G3DSA:3.30.190.20 150 228 2.0E-18 T 28-03-2018 AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 6.6E-50 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 Gene3D G3DSA:3.40.50.790 68 149 6.4E-36 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.6E-102 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 PIRSF PIRSF002155 1 227 1.8E-76 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 SUPERFAMILY SSF56808 6 225 2.35E-81 T 28-03-2018 IPR023674 Ribosomal protein L1-like AL504_RS19620 856e6e3b8ca29370d34680426edf5193 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS25960 84ca896c417f9d58c7c4777c0ff497aa 205 SUPERFAMILY SSF159709 25 204 1.22E-57 T 28-03-2018 AL504_RS25960 84ca896c417f9d58c7c4777c0ff497aa 205 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 17 204 4.4E-63 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AL504_RS25960 84ca896c417f9d58c7c4777c0ff497aa 205 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 18 202 2.2E-55 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AL504_RS25960 84ca896c417f9d58c7c4777c0ff497aa 205 PIRSF PIRSF020680 9 205 7.8E-66 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AL504_RS06310 1b1ade7283966fcd85c55bedfc27380d 110 Pfam PF02049 Flagellar hook-basal body complex protein FliE 25 110 1.1E-26 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL504_RS06310 1b1ade7283966fcd85c55bedfc27380d 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 95 108 4.7E-13 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL504_RS06310 1b1ade7283966fcd85c55bedfc27380d 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 39 55 4.7E-13 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL504_RS06310 1b1ade7283966fcd85c55bedfc27380d 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 74 90 4.7E-13 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL504_RS06310 1b1ade7283966fcd85c55bedfc27380d 110 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 110 16.88 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL504_RS06310 1b1ade7283966fcd85c55bedfc27380d 110 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 14 109 1.5E-20 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.0E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.0E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.0E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 1.9E-4 T 28-03-2018 AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 SUPERFAMILY SSF51735 1 247 1.45E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 4.2E-61 T 28-03-2018 AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 Gene3D G3DSA:3.40.50.720 1 248 9.7E-73 T 28-03-2018 AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.9E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.9E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14490 08a17b441cae09cfa6bfed2d96c1f919 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.9E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22170 45d8cfd3cbbbf4c0a3cd1d76dd0a19e4 259 SUPERFAMILY SSF54001 120 255 3.87E-10 T 28-03-2018 AL504_RS22170 45d8cfd3cbbbf4c0a3cd1d76dd0a19e4 259 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 1.8E-16 T 28-03-2018 IPR028090 JAB domain, prokaryotic AL504_RS22170 45d8cfd3cbbbf4c0a3cd1d76dd0a19e4 259 Gene3D G3DSA:3.90.1720.10 105 259 5.1E-8 T 28-03-2018 AL504_RS22170 45d8cfd3cbbbf4c0a3cd1d76dd0a19e4 259 Pfam PF00877 NlpC/P60 family 124 254 5.4E-14 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL504_RS22170 45d8cfd3cbbbf4c0a3cd1d76dd0a19e4 259 SUPERFAMILY SSF102712 130 136 3.01E-20 T 28-03-2018 AL504_RS22170 45d8cfd3cbbbf4c0a3cd1d76dd0a19e4 259 SUPERFAMILY SSF102712 3 101 3.01E-20 T 28-03-2018 AL504_RS22170 45d8cfd3cbbbf4c0a3cd1d76dd0a19e4 259 Gene3D G3DSA:3.40.140.10 2 104 8.7E-13 T 28-03-2018 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 Gene3D G3DSA:3.40.228.10 405 468 0.016 T 28-03-2018 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 Gene3D G3DSA:2.40.40.20 599 758 1.1E-32 T 28-03-2018 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 Pfam PF00384 Molybdopterin oxidoreductase 54 508 7.6E-68 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 Pfam PF01568 Molydopterin dinucleotide binding domain 625 738 3.5E-25 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 SUPERFAMILY SSF53706 12 627 6.81E-156 T 28-03-2018 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 Gene3D G3DSA:3.90.55.10 474 558 6.8E-24 T 28-03-2018 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 Gene3D G3DSA:3.90.55.10 6 90 1.5E-13 T 28-03-2018 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 Gene3D G3DSA:3.40.228.10 141 404 5.0E-58 T 28-03-2018 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 453 470 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 664 691 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL504_RS24390 5b45ad9e0abc6d0f78a0a06d1adfba4d 769 SUPERFAMILY SSF50692 619 762 6.1E-41 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 SUPERFAMILY SSF51215 24 134 9.55E-17 T 28-03-2018 AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 Gene3D G3DSA:1.10.10.60 86 219 5.3E-10 T 28-03-2018 AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 Pfam PF12833 Helix-turn-helix domain 189 265 1.7E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 SUPERFAMILY SSF46689 169 215 1.08E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 SUPERFAMILY SSF46689 218 266 1.16E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 SMART SM00342 182 264 1.7E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 Gene3D G3DSA:1.10.10.60 220 269 2.5E-11 T 28-03-2018 AL504_RS24855 e272030910f84a376bb26ab6bfc60e28 269 Pfam PF02311 AraC-like ligand binding domain 20 146 3.3E-20 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL504_RS22740 c3edf983774045801772fa78f848e927 308 Gene3D G3DSA:3.40.190.10 175 265 6.2E-16 T 28-03-2018 AL504_RS22740 c3edf983774045801772fa78f848e927 308 SUPERFAMILY SSF53850 87 296 1.76E-34 T 28-03-2018 AL504_RS22740 c3edf983774045801772fa78f848e927 308 Pfam PF03466 LysR substrate binding domain 85 284 3.0E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22740 c3edf983774045801772fa78f848e927 308 Gene3D G3DSA:3.40.190.10 85 174 1.7E-16 T 28-03-2018 AL504_RS22740 c3edf983774045801772fa78f848e927 308 SUPERFAMILY SSF46785 1 106 7.07E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22740 c3edf983774045801772fa78f848e927 308 Gene3D G3DSA:1.10.10.10 1 83 1.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22740 c3edf983774045801772fa78f848e927 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS26220 05a2ddd557d5cb929513389d5dfa9730 265 Gene3D G3DSA:3.40.710.10 3 262 2.5E-46 T 28-03-2018 AL504_RS26220 05a2ddd557d5cb929513389d5dfa9730 265 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 43 54 3.1E-12 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS26220 05a2ddd557d5cb929513389d5dfa9730 265 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 133 3.1E-12 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS26220 05a2ddd557d5cb929513389d5dfa9730 265 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 93 110 3.1E-12 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL504_RS26220 05a2ddd557d5cb929513389d5dfa9730 265 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 11 236 1.1E-55 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL504_RS26220 05a2ddd557d5cb929513389d5dfa9730 265 SUPERFAMILY SSF56601 8 250 1.21E-59 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS00185 5555941efde47bbf14297f47460d802e 316 Gene3D G3DSA:3.40.50.1980 34 151 5.5E-25 T 28-03-2018 AL504_RS00185 5555941efde47bbf14297f47460d802e 316 Pfam PF01497 Periplasmic binding protein 55 286 1.4E-24 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS00185 5555941efde47bbf14297f47460d802e 316 Gene3D G3DSA:3.40.50.1980 152 316 6.6E-33 T 28-03-2018 AL504_RS00185 5555941efde47bbf14297f47460d802e 316 SUPERFAMILY SSF53807 30 301 1.88E-63 T 28-03-2018 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.0E-28 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 SMART SM00411 1 91 5.2E-36 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 2 91 1.9E-37 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 SUPERFAMILY SSF47729 1 91 1.62E-28 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 7.7E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 7.7E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 7.7E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS11405 041b5ca58f87b747808819826d5ab287 119 Gene3D G3DSA:4.10.520.10 1 97 9.4E-29 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS30710 c3f996248155dd1a9cf5535acc8c636d 101 Pfam PF01817 Chorismate mutase type II 15 89 3.3E-16 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS30710 c3f996248155dd1a9cf5535acc8c636d 101 SUPERFAMILY SSF48600 8 94 5.04E-21 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS30710 c3f996248155dd1a9cf5535acc8c636d 101 Gene3D G3DSA:1.20.59.10 2 100 9.3E-25 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS30710 c3f996248155dd1a9cf5535acc8c636d 101 SMART SM00830 15 95 7.2E-21 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL504_RS26400 f05eb1d044432b7bb80cc66fbf878734 214 SMART SM00855 3 161 1.3E-21 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL504_RS26400 f05eb1d044432b7bb80cc66fbf878734 214 Gene3D G3DSA:3.40.50.1240 1 212 3.1E-56 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL504_RS26400 f05eb1d044432b7bb80cc66fbf878734 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 200 8.7E-61 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL504_RS26400 f05eb1d044432b7bb80cc66fbf878734 214 SUPERFAMILY SSF53254 1 206 6.94E-58 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL504_RS26400 f05eb1d044432b7bb80cc66fbf878734 214 PIRSF PIRSF000709 1 119 1.0E-8 T 28-03-2018 AL504_RS28285 60044684d0c77aa625e66e6a96908247 387 Gene3D G3DSA:3.40.50.10540 1 383 2.1E-147 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS28285 60044684d0c77aa625e66e6a96908247 387 SUPERFAMILY SSF89796 6 380 9.55E-135 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS28285 60044684d0c77aa625e66e6a96908247 387 Pfam PF02515 CoA-transferase family III 7 373 9.5E-130 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS17470 28f6f1bd684032ce4868e68eb8a47617 171 SMART SM00972 109 168 4.4E-12 T 28-03-2018 IPR007893 Spore coat protein U AL504_RS17470 28f6f1bd684032ce4868e68eb8a47617 171 Pfam PF05229 Spore Coat Protein U domain 30 168 2.0E-29 T 28-03-2018 IPR007893 Spore coat protein U AL504_RS02210 13dae9500fdaea2a0af0c694414e42da 186 Gene3D G3DSA:3.40.630.30 1 186 1.5E-18 T 28-03-2018 AL504_RS02210 13dae9500fdaea2a0af0c694414e42da 186 SUPERFAMILY SSF55729 6 166 4.56E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS02210 13dae9500fdaea2a0af0c694414e42da 186 Pfam PF13302 Acetyltransferase (GNAT) domain 14 155 5.0E-25 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS24525 dff0053908bec4e7b9f9ba72d00369af 126 Gene3D G3DSA:2.102.10.10 11 126 8.2E-18 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS24525 dff0053908bec4e7b9f9ba72d00369af 126 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 15 121 4.8E-30 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL504_RS24525 dff0053908bec4e7b9f9ba72d00369af 126 SUPERFAMILY SSF50022 15 123 3.33E-33 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS24525 dff0053908bec4e7b9f9ba72d00369af 126 Pfam PF13806 Rieske-like [2Fe-2S] domain 15 121 9.6E-37 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL504_RS27030 b0fd453473f8b1fb1df17f1c941b8656 264 SMART SM00382 31 226 3.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS27030 b0fd453473f8b1fb1df17f1c941b8656 264 Gene3D G3DSA:3.40.50.300 1 239 4.1E-53 T 28-03-2018 AL504_RS27030 b0fd453473f8b1fb1df17f1c941b8656 264 Pfam PF00005 ABC transporter 22 177 6.1E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS27030 b0fd453473f8b1fb1df17f1c941b8656 264 SUPERFAMILY SSF52540 2 235 5.54E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27030 b0fd453473f8b1fb1df17f1c941b8656 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 SUPERFAMILY SSF117916 5 84 1.34E-8 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 ProSitePatterns PS01215 Mrp family signature. 202 218 - T 28-03-2018 IPR000808 Mrp, conserved site GO:0005524 AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 Gene3D G3DSA:3.30.300.130 1 86 6.2E-6 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 Pfam PF01883 Iron-sulfur cluster assembly protein 6 76 2.5E-13 T 28-03-2018 IPR002744 MIP18 family-like AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 338 4.0E-102 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 339 37.422 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 Gene3D G3DSA:3.40.50.300 87 317 1.2E-66 T 28-03-2018 AL504_RS22940 8ccbf87bb785631331535e894970cbdd 362 SUPERFAMILY SSF52540 89 323 2.05E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16075 b61bf8246567e476bdb80f68302619c6 306 Gene3D G3DSA:1.10.3470.10 1 298 2.3E-39 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS16075 b61bf8246567e476bdb80f68302619c6 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 294 2.1E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS23035 16f058c7f717ca556615395870c9d475 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 66 1.5E-5 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS23035 16f058c7f717ca556615395870c9d475 301 SUPERFAMILY SSF161098 91 279 2.22E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23035 16f058c7f717ca556615395870c9d475 301 Gene3D G3DSA:1.10.3720.10 37 299 1.7E-37 T 28-03-2018 AL504_RS23035 16f058c7f717ca556615395870c9d475 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 298 4.0E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS22100 65e20659e3c9e25fe7c3c6d3c9233e2c 396 Gene3D G3DSA:1.20.1250.20 195 391 3.8E-24 T 28-03-2018 AL504_RS22100 65e20659e3c9e25fe7c3c6d3c9233e2c 396 Gene3D G3DSA:1.20.1250.20 1 188 3.8E-23 T 28-03-2018 AL504_RS22100 65e20659e3c9e25fe7c3c6d3c9233e2c 396 Pfam PF07690 Major Facilitator Superfamily 24 346 1.2E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS22100 65e20659e3c9e25fe7c3c6d3c9233e2c 396 SUPERFAMILY SSF103473 2 382 4.32E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS14610 e7acf966417420ec7bf7d42fba6e7a16 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 1.2E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14610 e7acf966417420ec7bf7d42fba6e7a16 217 SUPERFAMILY SSF161098 8 207 7.46E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14610 e7acf966417420ec7bf7d42fba6e7a16 217 Gene3D G3DSA:1.10.3720.10 1 217 2.1E-40 T 28-03-2018 AL504_RS15925 ba612ea55847836f3081a99c1f2240cc 133 Gene3D G3DSA:3.30.420.140 2 132 8.0E-37 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL504_RS15925 ba612ea55847836f3081a99c1f2240cc 133 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 131 21.031 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL504_RS15925 ba612ea55847836f3081a99c1f2240cc 133 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 128 7.6E-30 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL504_RS15925 ba612ea55847836f3081a99c1f2240cc 133 SMART SM00732 4 104 2.2E-28 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL504_RS15925 ba612ea55847836f3081a99c1f2240cc 133 Pfam PF03652 Holliday junction resolvase 5 129 1.1E-34 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL504_RS15925 ba612ea55847836f3081a99c1f2240cc 133 SUPERFAMILY SSF53098 5 129 3.19E-33 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS21985 6fd0192552377becfd2b5451e0983f8a 445 SUPERFAMILY SSF51735 14 150 2.47E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21985 6fd0192552377becfd2b5451e0983f8a 445 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 57 133 4.1E-5 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL504_RS21985 6fd0192552377becfd2b5451e0983f8a 445 Gene3D G3DSA:3.40.50.720 10 215 3.0E-24 T 28-03-2018 AL504_RS21985 6fd0192552377becfd2b5451e0983f8a 445 SMART SM00858 361 426 8.4E-5 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS15420 2e53f17bfce221a47b3688945c95701c 366 Pfam PF07201 HrpJ-like domain 86 216 9.3E-15 T 28-03-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 AL504_RS15420 2e53f17bfce221a47b3688945c95701c 366 Pfam PF09059 TyeA 287 365 3.9E-20 T 28-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AL504_RS15420 2e53f17bfce221a47b3688945c95701c 366 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 285 364 5.2E-17 T 28-03-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related AL504_RS15420 2e53f17bfce221a47b3688945c95701c 366 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 285 366 4.0E-5 T 28-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AL504_RS15420 2e53f17bfce221a47b3688945c95701c 366 SUPERFAMILY SSF140591 84 259 1.41E-29 T 28-03-2018 AL504_RS15420 2e53f17bfce221a47b3688945c95701c 366 SUPERFAMILY SSF140591 283 365 2.0E-15 T 28-03-2018 AL504_RS15420 2e53f17bfce221a47b3688945c95701c 366 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 44 271 1.0E-39 T 28-03-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 AL504_RS19665 7b08725754105612421408b2ecfd203b 238 Gene3D G3DSA:3.40.50.2300 1 122 3.2E-33 T 28-03-2018 AL504_RS19665 7b08725754105612421408b2ecfd203b 238 SMART SM00448 1 113 3.7E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS19665 7b08725754105612421408b2ecfd203b 238 SMART SM00862 148 224 1.4E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS19665 7b08725754105612421408b2ecfd203b 238 SUPERFAMILY SSF52172 2 186 1.42E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS19665 7b08725754105612421408b2ecfd203b 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.7E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS19665 7b08725754105612421408b2ecfd203b 238 Pfam PF00072 Response regulator receiver domain 6 113 8.1E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS19665 7b08725754105612421408b2ecfd203b 238 Gene3D G3DSA:1.10.10.10 123 231 7.1E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29600 5905a89ecfa152d5ab42e172fb2a9304 293 SUPERFAMILY SSF161098 87 276 1.3E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29600 5905a89ecfa152d5ab42e172fb2a9304 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 292 2.2E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29600 5905a89ecfa152d5ab42e172fb2a9304 293 Gene3D G3DSA:1.10.3720.10 14 281 8.6E-37 T 28-03-2018 AL504_RS29600 5905a89ecfa152d5ab42e172fb2a9304 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 12 56 8.1E-8 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS18370 d71bd5ac9d6a90e236c8d1da639600c4 332 Pfam PF03524 Conjugal transfer protein 105 324 3.9E-65 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AL504_RS18370 d71bd5ac9d6a90e236c8d1da639600c4 332 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 106 313 4.1E-90 T 28-03-2018 IPR014142 P-type conjugative transfer protein TrbG AL504_RS00960 0d562acc8f64ddde8403a782f882f9b6 348 Gene3D G3DSA:1.10.1530.10 11 87 2.0E-22 T 28-03-2018 AL504_RS00960 0d562acc8f64ddde8403a782f882f9b6 348 Pfam PF02615 Malate/L-lactate dehydrogenase 13 341 8.8E-110 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS00960 0d562acc8f64ddde8403a782f882f9b6 348 Gene3D G3DSA:3.30.1370.60 88 315 8.5E-82 T 28-03-2018 AL504_RS00960 0d562acc8f64ddde8403a782f882f9b6 348 SUPERFAMILY SSF89733 11 345 3.79E-104 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS10750 52e4b71856662b7c7c38f93afd41ee8e 299 Pfam PF04381 Putative exonuclease, RdgC 1 296 3.5E-119 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL504_RS10750 52e4b71856662b7c7c38f93afd41ee8e 299 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 298 36.799 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL504_RS03945 db1f104835b42a73b2897c681046521f 430 PIRSF PIRSF006060 1 427 1.0E-60 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS03945 db1f104835b42a73b2897c681046521f 430 Pfam PF13520 Amino acid permease 3 389 1.1E-41 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 Gene3D G3DSA:1.10.10.60 265 322 1.3E-14 T 28-03-2018 AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 Pfam PF14525 AraC-binding-like domain 19 186 1.4E-25 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 Pfam PF12833 Helix-turn-helix domain 235 315 2.0E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 297 1.5E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 313 1.5E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 SMART SM00342 228 313 9.0E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 SUPERFAMILY SSF46689 264 316 2.4E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS09345 b872957d040490c9f1c602961b5136b4 323 Gene3D G3DSA:1.10.10.60 207 264 8.2E-9 T 28-03-2018 AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 Pfam PF00106 short chain dehydrogenase 11 203 2.1E-51 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 184 3.5E-4 T 28-03-2018 AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 SUPERFAMILY SSF51735 9 239 1.06E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04890 b9f0cb0834a4ce45e1fd039609c59736 256 Gene3D G3DSA:3.40.50.720 1 204 4.2E-57 T 28-03-2018 AL504_RS28535 554d04370f013fa8760492826ce5d4ce 696 SUPERFAMILY SSF52540 13 636 1.81E-125 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28535 554d04370f013fa8760492826ce5d4ce 696 Pfam PF13361 UvrD-like helicase C-terminal domain 307 461 4.5E-17 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL504_RS28535 554d04370f013fa8760492826ce5d4ce 696 Pfam PF13361 UvrD-like helicase C-terminal domain 566 630 2.3E-19 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL504_RS28535 554d04370f013fa8760492826ce5d4ce 696 Gene3D G3DSA:3.40.50.300 14 310 7.1E-52 T 28-03-2018 AL504_RS28535 554d04370f013fa8760492826ce5d4ce 696 Gene3D G3DSA:3.40.50.300 443 667 9.5E-33 T 28-03-2018 AL504_RS28535 554d04370f013fa8760492826ce5d4ce 696 Gene3D G3DSA:3.40.50.300 311 414 1.7E-16 T 28-03-2018 AL504_RS28535 554d04370f013fa8760492826ce5d4ce 696 Pfam PF00580 UvrD/REP helicase N-terminal domain 37 300 3.6E-50 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL504_RS02610 f8368f033beaf11b674177fc5ed8585c 116 Pfam PF11804 Protein of unknown function (DUF3325) 11 108 1.8E-31 T 28-03-2018 IPR021762 Protein of unknown function DUF3325 AL504_RS20305 b05e125d253649c60e91083f082e353f 291 Gene3D G3DSA:3.40.50.720 74 285 1.8E-28 T 28-03-2018 AL504_RS20305 b05e125d253649c60e91083f082e353f 291 Pfam PF01370 NAD dependent epimerase/dehydratase family 82 203 4.0E-9 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS20305 b05e125d253649c60e91083f082e353f 291 Gene3D G3DSA:3.40.50.720 1 64 2.0E-5 T 28-03-2018 AL504_RS20305 b05e125d253649c60e91083f082e353f 291 SUPERFAMILY SSF51735 1 280 1.27E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16700 300966da479dd5217e540729e0138aa0 251 SMART SM00382 29 222 7.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16700 300966da479dd5217e540729e0138aa0 251 SUPERFAMILY SSF52540 3 246 3.0E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16700 300966da479dd5217e540729e0138aa0 251 Gene3D G3DSA:3.40.50.300 1 250 1.5E-52 T 28-03-2018 AL504_RS16700 300966da479dd5217e540729e0138aa0 251 Pfam PF00005 ABC transporter 21 176 5.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS16700 300966da479dd5217e540729e0138aa0 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 245 1.2E-8 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS11180 209f29e5253018fb181057e15d89c7bf 466 Pfam PF01554 MatE 249 410 7.4E-19 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS11180 209f29e5253018fb181057e15d89c7bf 466 Pfam PF01554 MatE 24 184 6.2E-24 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS11180 209f29e5253018fb181057e15d89c7bf 466 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 413 9.5E-71 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS11180 209f29e5253018fb181057e15d89c7bf 466 PIRSF PIRSF006603 12 466 2.3E-53 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS11720 81b203a03c82724dfef11a06e894d802 683 Pfam PF03169 OPT oligopeptide transporter protein 15 639 8.9E-107 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AL504_RS11720 81b203a03c82724dfef11a06e894d802 683 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 9 636 2.1E-112 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AL504_RS11720 81b203a03c82724dfef11a06e894d802 683 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 15 640 3.9E-214 T 28-03-2018 IPR004814 Oligopeptide transporter OPT AL504_RS13795 43a362afc795a0e33ca6848b5802ea11 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 326 6.7E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS13795 43a362afc795a0e33ca6848b5802ea11 330 PIRSF PIRSF017082 1 329 6.6E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS13795 43a362afc795a0e33ca6848b5802ea11 330 Gene3D G3DSA:3.40.190.10 129 239 2.1E-17 T 28-03-2018 AL504_RS13795 43a362afc795a0e33ca6848b5802ea11 330 SUPERFAMILY SSF53850 116 290 2.17E-16 T 28-03-2018 AL504_RS29505 a9f91e0d9b2140e615ed5d5fe3e14124 298 Pfam PF12146 Serine aminopeptidase, S33 96 237 1.4E-11 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS29505 a9f91e0d9b2140e615ed5d5fe3e14124 298 SUPERFAMILY SSF53474 231 293 9.73E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29505 a9f91e0d9b2140e615ed5d5fe3e14124 298 SUPERFAMILY SSF53474 79 193 9.73E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29505 a9f91e0d9b2140e615ed5d5fe3e14124 298 Gene3D G3DSA:3.40.50.1820 61 298 5.6E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23805 02be7762d116da97a3c41094b22a3406 313 Gene3D G3DSA:3.40.190.10 53 223 4.6E-11 T 28-03-2018 AL504_RS23805 02be7762d116da97a3c41094b22a3406 313 SUPERFAMILY SSF53850 105 272 3.18E-15 T 28-03-2018 AL504_RS23805 02be7762d116da97a3c41094b22a3406 313 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 40 309 8.8E-65 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS23805 02be7762d116da97a3c41094b22a3406 313 PIRSF PIRSF017082 1 312 1.5E-67 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21355 3ed78ea383f6aaad04d5cdb4aba6f048 156 PIRSF PIRSF029256 1 155 9.2E-59 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL504_RS21355 3ed78ea383f6aaad04d5cdb4aba6f048 156 SUPERFAMILY SSF75217 1 153 1.44E-40 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL504_RS21355 3ed78ea383f6aaad04d5cdb4aba6f048 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 6.7E-32 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL504_RS21355 3ed78ea383f6aaad04d5cdb4aba6f048 156 Gene3D G3DSA:3.40.1280.10 1 154 1.9E-38 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL504_RS21355 3ed78ea383f6aaad04d5cdb4aba6f048 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 30.471 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL504_RS13065 87a189cff8b9b808a757f54b4cd537ee 407 Pfam PF02515 CoA-transferase family III 17 378 1.7E-97 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS13065 87a189cff8b9b808a757f54b4cd537ee 407 SUPERFAMILY SSF89796 13 402 2.49E-111 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS13065 87a189cff8b9b808a757f54b4cd537ee 407 Gene3D G3DSA:3.40.50.10540 11 407 4.2E-114 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 Gene3D G3DSA:1.20.1250.20 221 417 6.7E-24 T 28-03-2018 AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 PRINTS PR01035 Tetracycline resistance protein signature 96 120 1.1E-8 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 PRINTS PR01035 Tetracycline resistance protein signature 153 175 1.1E-8 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 PRINTS PR01035 Tetracycline resistance protein signature 358 381 1.1E-8 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 PRINTS PR01035 Tetracycline resistance protein signature 34 50 1.1E-8 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 PRINTS PR01035 Tetracycline resistance protein signature 123 144 1.1E-8 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 SUPERFAMILY SSF103473 22 412 5.23E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 Gene3D G3DSA:1.20.1250.20 18 220 1.1E-33 T 28-03-2018 AL504_RS24415 473442acda193a4d40fc0fb313a361eb 418 Pfam PF07690 Major Facilitator Superfamily 29 313 3.3E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 SUPERFAMILY SSF46785 3 109 5.94E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 Gene3D G3DSA:3.40.190.10 91 177 1.4E-18 T 28-03-2018 AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 SUPERFAMILY SSF53850 92 300 9.5E-40 T 28-03-2018 AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 Gene3D G3DSA:3.40.190.10 178 271 1.8E-19 T 28-03-2018 AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 Gene3D G3DSA:1.10.10.10 1 85 7.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 Pfam PF03466 LysR substrate binding domain 91 297 4.8E-42 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22400 5dceaf0e576fb0c0b7b333d0602c8ba4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 SUPERFAMILY SSF55961 172 378 4.87E-30 T 28-03-2018 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 111 131 4.2E-13 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 90 110 4.2E-13 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 39 64 4.2E-13 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 69 84 4.2E-13 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 Pfam PF00355 Rieske [2Fe-2S] domain 57 139 2.1E-15 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 190 379 5.1E-27 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 Gene3D G3DSA:3.90.380.10 158 380 2.1E-37 T 28-03-2018 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 Gene3D G3DSA:2.102.10.10 54 157 9.4E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 SUPERFAMILY SSF50022 23 165 6.02E-40 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS29495 12f180ffe2676b186292dab256a74565 381 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 97 120 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AL504_RS09660 add1072b4100504ca18aadc6fe3cbaa4 149 Gene3D G3DSA:1.10.10.10 38 115 7.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS09660 add1072b4100504ca18aadc6fe3cbaa4 149 Gene3D G3DSA:1.10.10.10 1 37 1.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 Gene3D G3DSA:2.40.110.10 132 233 1.3E-14 T 28-03-2018 AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 Gene3D G3DSA:1.10.540.10 18 131 1.3E-16 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 383 1.7E-16 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 PIRSF PIRSF016578 5 405 1.7E-25 T 28-03-2018 AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 Gene3D G3DSA:1.20.140.10 237 409 4.7E-23 T 28-03-2018 AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 SUPERFAMILY SSF56645 31 231 1.96E-38 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 SUPERFAMILY SSF47203 245 400 8.7E-21 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS17300 5d8204a3b83fa65052cfe319ee0a0a85 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 128 6.7E-11 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS20980 3fdeb9712770245bf22c3a592072b6eb 510 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 17 498 1.6E-163 T 28-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS20980 3fdeb9712770245bf22c3a592072b6eb 510 Gene3D G3DSA:3.90.1300.10 10 507 2.6E-165 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS20980 3fdeb9712770245bf22c3a592072b6eb 510 SUPERFAMILY SSF75304 12 505 6.28E-152 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS20980 3fdeb9712770245bf22c3a592072b6eb 510 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 16 499 94.114 T 28-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS20980 3fdeb9712770245bf22c3a592072b6eb 510 Pfam PF01425 Amidase 31 488 8.7E-145 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS20980 3fdeb9712770245bf22c3a592072b6eb 510 ProSitePatterns PS00571 Amidases signature. 155 186 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS03050 d727f68970338427232fb846a12c967e 329 Pfam PF16220 Domain of unknown function (DUF4880) 25 66 6.6E-11 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS03050 d727f68970338427232fb846a12c967e 329 PIRSF PIRSF018266 15 329 2.9E-82 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS03050 d727f68970338427232fb846a12c967e 329 Pfam PF04773 FecR protein 122 217 3.0E-16 T 28-03-2018 IPR006860 FecR protein AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 59 240 3.3E-66 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 Pfam PF01578 Cytochrome C assembly protein 41 198 2.9E-28 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 218 242 3.2E-45 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 114 134 3.2E-45 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 59 76 3.2E-45 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 135 155 3.2E-45 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 170 196 3.2E-45 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS07505 6919887c565735e2448cb9aba9718f62 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 76 96 3.2E-45 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL504_RS03440 23b6d5a6e194efa2a91f916505c5516d 524 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 115 522 1.7E-146 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AL504_RS03440 23b6d5a6e194efa2a91f916505c5516d 524 Pfam PF08666 SAF domain 18 84 5.6E-9 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS03440 23b6d5a6e194efa2a91f916505c5516d 524 SMART SM00858 18 88 1.1E-8 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS03440 23b6d5a6e194efa2a91f916505c5516d 524 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 11 524 2.2E-275 T 28-03-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 424 5.1E-83 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 Pfam PF07687 Peptidase dimerisation domain 190 280 1.3E-4 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 SUPERFAMILY SSF55031 191 294 1.24E-18 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 Gene3D G3DSA:3.40.630.10 361 457 9.1E-10 T 28-03-2018 AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 Gene3D G3DSA:3.40.630.10 3 310 1.5E-45 T 28-03-2018 AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 PIRSF PIRSF037227 1 474 1.2E-204 T 28-03-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 SUPERFAMILY SSF53187 376 438 1.08E-56 T 28-03-2018 AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 SUPERFAMILY SSF53187 6 201 1.08E-56 T 28-03-2018 AL504_RS11030 36c1cb548e67997be2f3a5eab3f283c5 474 SUPERFAMILY SSF53187 301 330 1.08E-56 T 28-03-2018 AL504_RS03900 311e3d154d88a93bd7f95eb2d901d10f 123 Gene3D G3DSA:3.30.1330.40 6 123 2.2E-34 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS03900 311e3d154d88a93bd7f95eb2d901d10f 123 Pfam PF01042 Endoribonuclease L-PSP 15 121 2.2E-28 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS03900 311e3d154d88a93bd7f95eb2d901d10f 123 SUPERFAMILY SSF55298 13 123 1.13E-35 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS17255 17b8eae7e27db2b2b66bbe4ca4646fa8 263 Gene3D G3DSA:3.20.20.370 26 258 7.4E-40 T 28-03-2018 AL504_RS17255 17b8eae7e27db2b2b66bbe4ca4646fa8 263 Pfam PF01522 Polysaccharide deacetylase 28 176 1.7E-21 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL504_RS17255 17b8eae7e27db2b2b66bbe4ca4646fa8 263 SUPERFAMILY SSF88713 26 252 1.03E-42 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS19100 b1e9fe388dfb1f34430deee008a9fc1b 316 Gene3D G3DSA:1.10.3470.10 5 305 9.4E-36 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS19100 b1e9fe388dfb1f34430deee008a9fc1b 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 293 1.5E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS15530 0a112e2703fabe4c9eccb01333e69cfc 827 Gene3D G3DSA:1.25.40.10 368 814 2.8E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 SUPERFAMILY SSF46785 2 76 3.33E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 Pfam PF07729 FCD domain 82 204 3.4E-23 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 SMART SM00345 14 72 2.7E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 Gene3D G3DSA:1.10.10.10 1 74 1.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 Gene3D G3DSA:1.20.120.530 75 221 2.4E-29 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 SMART SM00895 82 205 3.3E-18 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 2.6E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS01680 3b6ef0e153df7e1d95b14080f4313a2f 228 SUPERFAMILY SSF48008 78 209 5.23E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS02935 f419b6e3917b8932898314355681b313 277 Pfam PF13827 Domain of unknown function (DUF4189) 34 125 9.3E-16 T 28-03-2018 IPR025240 Domain of unknown function DUF4189 AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 53 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 Pfam PF16925 Bacterial transcriptional repressor C-terminal 93 165 7.0E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 2.4E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 SUPERFAMILY SSF46689 5 72 8.72E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 4.0E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 4.0E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 SUPERFAMILY SSF48498 76 178 1.91E-25 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 Gene3D G3DSA:1.10.357.10 58 190 1.4E-26 T 28-03-2018 AL504_RS07155 49630e9e355964cb4992d54f67b4ed0f 193 Gene3D G3DSA:1.10.10.60 1 57 1.0E-16 T 28-03-2018 AL504_RS06125 5ca01cf7e7807e675c406394ccb4a3a6 262 Gene3D G3DSA:3.30.1330.30 1 102 1.1E-10 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL504_RS06125 5ca01cf7e7807e675c406394ccb4a3a6 262 SUPERFAMILY SSF55315 2 100 1.15E-10 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL504_RS06125 5ca01cf7e7807e675c406394ccb4a3a6 262 SUPERFAMILY SSF75217 111 259 2.29E-36 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL504_RS06125 5ca01cf7e7807e675c406394ccb4a3a6 262 Pfam PF00588 SpoU rRNA Methylase family 113 250 2.1E-29 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL504_RS06125 5ca01cf7e7807e675c406394ccb4a3a6 262 Gene3D G3DSA:3.40.1280.10 103 261 1.5E-40 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL504_RS14055 b55ce0f5ee41f940e4d18503038d6fce 652 SUPERFAMILY SSF52540 5 227 5.09E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14055 b55ce0f5ee41f940e4d18503038d6fce 652 Pfam PF12704 MacB-like periplasmic core domain 275 494 6.4E-40 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL504_RS14055 b55ce0f5ee41f940e4d18503038d6fce 652 Pfam PF00005 ABC transporter 25 173 6.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS14055 b55ce0f5ee41f940e4d18503038d6fce 652 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS14055 b55ce0f5ee41f940e4d18503038d6fce 652 Pfam PF02687 FtsX-like permease family 556 645 1.8E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL504_RS14055 b55ce0f5ee41f940e4d18503038d6fce 652 Gene3D G3DSA:3.40.50.300 1 235 1.2E-64 T 28-03-2018 AL504_RS14055 b55ce0f5ee41f940e4d18503038d6fce 652 SMART SM00382 34 221 8.3E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS00155 51c96cfa5112de1e1a4419467736abbd 426 Pfam PF02687 FtsX-like permease family 312 419 3.8E-13 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL504_RS00155 51c96cfa5112de1e1a4419467736abbd 426 Pfam PF12704 MacB-like periplasmic core domain 38 255 8.9E-19 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL504_RS00155 51c96cfa5112de1e1a4419467736abbd 426 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 425 4.3E-139 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL504_RS25100 1e13b9b25518545b1410327b46b574a8 468 PIRSF PIRSF006060 9 468 1.5E-64 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS25100 1e13b9b25518545b1410327b46b574a8 468 Pfam PF00324 Amino acid permease 26 452 5.0E-92 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AL504_RS25100 1e13b9b25518545b1410327b46b574a8 468 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AL504_RS17890 fce96569e80e597e2fbca8bb4f6bef3b 291 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 4 223 2.9E-51 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL504_RS17890 fce96569e80e597e2fbca8bb4f6bef3b 291 SUPERFAMILY SSF160467 4 95 6.41E-15 T 28-03-2018 AL504_RS17890 fce96569e80e597e2fbca8bb4f6bef3b 291 Gene3D G3DSA:3.30.1360.40 1 83 3.3E-16 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL504_RS17890 fce96569e80e597e2fbca8bb4f6bef3b 291 SUPERFAMILY SSF50891 92 247 2.05E-28 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS17890 fce96569e80e597e2fbca8bb4f6bef3b 291 Gene3D G3DSA:2.40.100.10 89 249 8.1E-40 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS17890 fce96569e80e597e2fbca8bb4f6bef3b 291 SMART SM00796 3 231 1.6E-67 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL504_RS13265 d25c2088bed5b8c62c8f5a5b600c8145 290 SUPERFAMILY SSF53697 99 280 6.81E-35 T 28-03-2018 AL504_RS13265 d25c2088bed5b8c62c8f5a5b600c8145 290 Gene3D G3DSA:3.40.50.10490 99 282 1.7E-35 T 28-03-2018 AL504_RS13265 d25c2088bed5b8c62c8f5a5b600c8145 290 Pfam PF01380 SIS domain 130 253 2.0E-16 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS13265 d25c2088bed5b8c62c8f5a5b600c8145 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 77 3.4E-13 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL504_RS13265 d25c2088bed5b8c62c8f5a5b600c8145 290 SUPERFAMILY SSF46689 5 77 2.69E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS13265 d25c2088bed5b8c62c8f5a5b600c8145 290 Gene3D G3DSA:1.10.10.10 4 98 5.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 SMART SM00965 43 94 5.5E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 843 860 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 Gene3D G3DSA:2.170.130.10 118 236 1.6E-5 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 SUPERFAMILY SSF56935 613 860 8.7E-44 T 28-03-2018 AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 SUPERFAMILY SSF56935 283 582 8.7E-44 T 28-03-2018 AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 SUPERFAMILY SSF56935 120 256 8.7E-44 T 28-03-2018 AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 235 2.5E-4 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30720 e4c6066d9916c50367becf2f88bfcd64 860 Gene3D G3DSA:2.40.170.20 237 860 2.8E-35 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS30615 e804505adb0751f082a6f00e9eaea89c 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 338 2.4E-65 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL504_RS30615 e804505adb0751f082a6f00e9eaea89c 370 SUPERFAMILY SSF51395 1 352 7.33E-113 T 28-03-2018 AL504_RS30615 e804505adb0751f082a6f00e9eaea89c 370 Gene3D G3DSA:3.20.20.70 1 365 4.4E-117 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS12295 fe20db96b22ea283a4d0657d5fd65220 408 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 406 6.2E-191 T 28-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase AL504_RS12295 fe20db96b22ea283a4d0657d5fd65220 408 PIRSF PIRSF020818 1 408 9.7E-203 T 28-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase AL504_RS12295 fe20db96b22ea283a4d0657d5fd65220 408 Gene3D G3DSA:3.40.50.1820 73 407 1.7E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS12295 fe20db96b22ea283a4d0657d5fd65220 408 Pfam PF06850 PHB de-polymerase C-terminus 206 406 1.4E-95 T 28-03-2018 IPR009656 PHB de-polymerase, C-terminal AL504_RS12295 fe20db96b22ea283a4d0657d5fd65220 408 SUPERFAMILY SSF53474 99 405 7.61E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00685 7172b9b20cb04df8486ccc75c39d4374 264 Gene3D G3DSA:3.40.50.1820 1 260 1.4E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00685 7172b9b20cb04df8486ccc75c39d4374 264 SUPERFAMILY SSF53474 10 258 2.32E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00685 7172b9b20cb04df8486ccc75c39d4374 264 Pfam PF00561 alpha/beta hydrolase fold 34 176 2.6E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS20910 c217d66466e1d79ca5cc44e6fc7cc77d 640 Pfam PF00005 ABC transporter 405 565 5.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS20910 c217d66466e1d79ca5cc44e6fc7cc77d 640 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 614 636 2.6E-9 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS20910 c217d66466e1d79ca5cc44e6fc7cc77d 640 Gene3D G3DSA:1.10.3470.10 17 345 3.3E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS20910 c217d66466e1d79ca5cc44e6fc7cc77d 640 SUPERFAMILY SSF52540 388 635 7.99E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20910 c217d66466e1d79ca5cc44e6fc7cc77d 640 SMART SM00382 414 622 2.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS20910 c217d66466e1d79ca5cc44e6fc7cc77d 640 Pfam PF02653 Branched-chain amino acid transport system / permease component 29 341 1.9E-39 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS20910 c217d66466e1d79ca5cc44e6fc7cc77d 640 Gene3D G3DSA:3.40.50.300 383 636 1.7E-53 T 28-03-2018 AL504_RS10030 edd5933a687b3dec856fcca4e6b3e8f3 324 Gene3D G3DSA:3.40.190.10 149 231 0.0037 T 28-03-2018 AL504_RS10030 edd5933a687b3dec856fcca4e6b3e8f3 324 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 285 8.5E-68 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS10030 edd5933a687b3dec856fcca4e6b3e8f3 324 PIRSF PIRSF006470 1 324 1.1E-94 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS10030 edd5933a687b3dec856fcca4e6b3e8f3 324 SUPERFAMILY SSF53850 26 286 2.84E-5 T 28-03-2018 AL504_RS10030 edd5933a687b3dec856fcca4e6b3e8f3 324 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 310 2.9E-85 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS15465 3f01e1c18f400abbfe7742b3c120dfba 492 SUPERFAMILY SSF55931 339 472 4.41E-15 T 28-03-2018 AL504_RS15465 3f01e1c18f400abbfe7742b3c120dfba 492 SUPERFAMILY SSF55931 60 250 4.41E-15 T 28-03-2018 AL504_RS15465 3f01e1c18f400abbfe7742b3c120dfba 492 SUPERFAMILY SSF55931 5 22 4.41E-15 T 28-03-2018 AL504_RS15465 3f01e1c18f400abbfe7742b3c120dfba 492 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 89 213 1.5E-9 T 28-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 145 156 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 SUPERFAMILY SSF51621 15 948 2.51E-285 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 7 948 18.884 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 Gene3D G3DSA:1.20.1440.90 288 411 9.2E-25 T 28-03-2018 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 584 596 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 763 789 1.9E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 409 429 1.9E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 258 273 1.9E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 144 157 1.9E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 582 602 1.9E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 624 653 1.9E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 196 212 1.9E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS21865 921a131830a1a3133569c9050b051f48 948 Pfam PF00311 Phosphoenolpyruvate carboxylase 141 948 5.6E-285 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL504_RS10660 5d32a6dcda5b69a14cfa1d13f4733b09 535 Pfam PF07219 HemY protein N-terminus 26 133 1.1E-27 T 28-03-2018 IPR010817 HemY, N-terminal AL504_RS10660 5d32a6dcda5b69a14cfa1d13f4733b09 535 SUPERFAMILY SSF48452 327 382 7.11E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS10660 5d32a6dcda5b69a14cfa1d13f4733b09 535 SUPERFAMILY SSF48452 263 295 7.11E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS10660 5d32a6dcda5b69a14cfa1d13f4733b09 535 Gene3D G3DSA:1.25.40.10 51 228 2.5E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS10660 5d32a6dcda5b69a14cfa1d13f4733b09 535 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 390 1.1E-86 T 28-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AL504_RS10660 5d32a6dcda5b69a14cfa1d13f4733b09 535 Gene3D G3DSA:1.25.40.10 239 477 1.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS31255 35cf52a34c04507767216fb9ee81053c 180 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 139 4.4E-63 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL504_RS31255 35cf52a34c04507767216fb9ee81053c 180 Gene3D G3DSA:1.10.10.10 1 146 4.8E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31255 35cf52a34c04507767216fb9ee81053c 180 SUPERFAMILY SSF46785 2 137 6.62E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31255 35cf52a34c04507767216fb9ee81053c 180 Pfam PF02082 Transcriptional regulator 1 83 3.3E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL504_RS31255 35cf52a34c04507767216fb9ee81053c 180 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 136 9.5E-42 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL504_RS08025 4dc254c956a49452953d5aa0908464de 416 Pfam PF01494 FAD binding domain 5 234 8.9E-15 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS08025 4dc254c956a49452953d5aa0908464de 416 SUPERFAMILY SSF51905 3 174 1.75E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS08025 4dc254c956a49452953d5aa0908464de 416 SUPERFAMILY SSF51905 282 385 1.75E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS08025 4dc254c956a49452953d5aa0908464de 416 Gene3D G3DSA:3.50.50.60 4 174 2.5E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS08025 4dc254c956a49452953d5aa0908464de 416 Gene3D G3DSA:3.30.9.10 175 325 1.9E-16 T 28-03-2018 AL504_RS16325 bcf655fc7de96722f3971698055068b6 419 SUPERFAMILY SSF53474 18 179 4.46E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16325 bcf655fc7de96722f3971698055068b6 419 SUPERFAMILY SSF53474 258 392 4.46E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16325 bcf655fc7de96722f3971698055068b6 419 Gene3D G3DSA:3.40.50.1820 7 416 7.0E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS30190 2cf50bcc44cae19f3dd692584963040f 147 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 3 145 7.7E-23 T 28-03-2018 IPR019587 Polyketide cyclase/dehydrase AL504_RS30190 2cf50bcc44cae19f3dd692584963040f 147 Gene3D G3DSA:3.30.530.20 2 146 5.0E-30 T 28-03-2018 IPR023393 START-like domain AL504_RS30190 2cf50bcc44cae19f3dd692584963040f 147 SUPERFAMILY SSF55961 2 145 2.16E-29 T 28-03-2018 AL504_RS06905 eb353dac6ab986961c1d05501529ba13 347 Gene3D G3DSA:3.40.50.970 10 220 4.5E-64 T 28-03-2018 AL504_RS06905 eb353dac6ab986961c1d05501529ba13 347 SUPERFAMILY SSF52922 215 345 6.28E-42 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS06905 eb353dac6ab986961c1d05501529ba13 347 Pfam PF02780 Transketolase, C-terminal domain 221 337 7.0E-37 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL504_RS06905 eb353dac6ab986961c1d05501529ba13 347 Gene3D G3DSA:3.40.50.920 221 346 1.0E-30 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS06905 eb353dac6ab986961c1d05501529ba13 347 SMART SM00861 14 189 9.9E-66 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS06905 eb353dac6ab986961c1d05501529ba13 347 SUPERFAMILY SSF52518 12 229 3.85E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS06905 eb353dac6ab986961c1d05501529ba13 347 Pfam PF02779 Transketolase, pyrimidine binding domain 13 188 1.8E-44 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS17505 473c74397697cb5cc5842ae5877ce870 203 Gene3D G3DSA:2.60.120.10 113 200 3.0E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS17505 473c74397697cb5cc5842ae5877ce870 203 Pfam PF05962 HutD 12 175 1.7E-51 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves AL504_RS17505 473c74397697cb5cc5842ae5877ce870 203 SUPERFAMILY SSF51182 6 176 8.27E-53 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS17505 473c74397697cb5cc5842ae5877ce870 203 Gene3D G3DSA:2.60.120.10 11 112 3.1E-39 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 Pfam PF00210 Ferritin-like domain 30 166 1.6E-31 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 Gene3D G3DSA:1.20.1260.10 13 166 5.6E-49 T 28-03-2018 IPR012347 Ferritin-related AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 ProSitePatterns PS00819 Dps protein family signature 2. 74 88 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 SUPERFAMILY SSF47240 14 166 5.08E-48 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 48 64 2.5E-11 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 72 88 2.5E-11 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 143 161 2.5E-11 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS04705 1d60e48e37222a3d3217f69e908d45de 166 PIRSF PIRSF005900 5 166 3.1E-44 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL504_RS08660 dfaa1b76f004fba76cbec44616b9fddd 152 SUPERFAMILY SSF54631 2 126 4.55E-28 T 28-03-2018 AL504_RS08660 dfaa1b76f004fba76cbec44616b9fddd 152 SMART SM00116 78 125 0.015 T 28-03-2018 IPR000644 CBS domain AL504_RS08660 dfaa1b76f004fba76cbec44616b9fddd 152 SMART SM00116 14 61 1.3E-4 T 28-03-2018 IPR000644 CBS domain AL504_RS08660 dfaa1b76f004fba76cbec44616b9fddd 152 Gene3D G3DSA:3.10.580.10 1 138 4.5E-25 T 28-03-2018 AL504_RS08660 dfaa1b76f004fba76cbec44616b9fddd 152 Pfam PF00571 CBS domain 72 125 2.1E-8 T 28-03-2018 IPR000644 CBS domain AL504_RS08660 dfaa1b76f004fba76cbec44616b9fddd 152 Pfam PF00571 CBS domain 16 60 1.2E-7 T 28-03-2018 IPR000644 CBS domain AL504_RS16155 806664deb7531da86aae89361a63d0cf 215 Pfam PF01121 Dephospho-CoA kinase 4 178 2.5E-53 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL504_RS16155 806664deb7531da86aae89361a63d0cf 215 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 179 1.5E-40 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL504_RS16155 806664deb7531da86aae89361a63d0cf 215 SUPERFAMILY SSF52540 1 199 3.18E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16155 806664deb7531da86aae89361a63d0cf 215 Gene3D G3DSA:3.40.50.300 1 207 1.4E-40 T 28-03-2018 AL504_RS16155 806664deb7531da86aae89361a63d0cf 215 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 195 25.499 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL504_RS20395 c9dc57cc8bccdffff2b5848b3ead74d7 332 Gene3D G3DSA:3.40.50.720 2 190 7.2E-43 T 28-03-2018 AL504_RS20395 c9dc57cc8bccdffff2b5848b3ead74d7 332 Gene3D G3DSA:3.90.25.10 191 330 5.0E-29 T 28-03-2018 AL504_RS20395 c9dc57cc8bccdffff2b5848b3ead74d7 332 TIGRFAM TIGR04180 EDH_00030: NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family 4 299 2.2E-159 T 28-03-2018 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family AL504_RS20395 c9dc57cc8bccdffff2b5848b3ead74d7 332 SUPERFAMILY SSF51735 3 321 1.61E-89 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20395 c9dc57cc8bccdffff2b5848b3ead74d7 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 306 8.7E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 396 546 3.9E-28 T 28-03-2018 IPR006512 YidE/YbjL duplication AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 SUPERFAMILY SSF116726 228 286 6.41E-6 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 Gene3D G3DSA:3.30.70.1450 222 290 5.5E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 7 561 7.4E-188 T 28-03-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 SUPERFAMILY SSF116726 302 378 1.7E-6 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 Pfam PF06826 Predicted Permease Membrane Region 390 559 1.2E-32 T 28-03-2018 IPR006512 YidE/YbjL duplication AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 Pfam PF06826 Predicted Permease Membrane Region 15 177 6.4E-28 T 28-03-2018 IPR006512 YidE/YbjL duplication AL504_RS11325 8db92139f5a9b5aa08a46bfa7b72e005 567 Gene3D G3DSA:3.30.70.1450 291 383 9.8E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL504_RS05180 cf593189f895adf8aa2efa7d4f0db352 252 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 38.465 T 28-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL504_RS05180 cf593189f895adf8aa2efa7d4f0db352 252 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 6.9E-64 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL504_RS05180 cf593189f895adf8aa2efa7d4f0db352 252 Pfam PF01975 Survival protein SurE 3 182 1.2E-58 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL504_RS05180 cf593189f895adf8aa2efa7d4f0db352 252 Gene3D G3DSA:3.40.1210.10 1 250 1.1E-84 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL504_RS05180 cf593189f895adf8aa2efa7d4f0db352 252 SUPERFAMILY SSF64167 1 247 6.02E-84 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL504_RS06260 7d89ac234b1c95c20ac288c2620c614e 410 Gene3D G3DSA:3.40.50.10540 10 410 1.6E-128 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS06260 7d89ac234b1c95c20ac288c2620c614e 410 SUPERFAMILY SSF89796 10 404 6.54E-124 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS06260 7d89ac234b1c95c20ac288c2620c614e 410 Pfam PF02515 CoA-transferase family III 15 382 1.5E-110 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS29385 b0bd82912cb4590f632f41588cc2103f 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 22 284 3.1E-52 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL504_RS29385 b0bd82912cb4590f632f41588cc2103f 287 SUPERFAMILY SSF53613 23 282 9.67E-61 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS29385 b0bd82912cb4590f632f41588cc2103f 287 Pfam PF08543 Phosphomethylpyrimidine kinase 101 280 9.4E-23 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL504_RS29385 b0bd82912cb4590f632f41588cc2103f 287 Gene3D G3DSA:3.40.1190.20 17 284 3.3E-54 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 Gene3D G3DSA:3.40.30.10 1 85 7.1E-29 T 28-03-2018 AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 1.1E-35 T 28-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 Pfam PF00462 Glutaredoxin 4 64 4.6E-22 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 SUPERFAMILY SSF52833 1 84 1.77E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 PRINTS PR00160 Glutaredoxin signature 61 74 2.6E-19 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 PRINTS PR00160 Glutaredoxin signature 47 60 2.6E-19 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL504_RS21375 0a94ca1aea1e4fcf9632e3b82f6ed6ef 85 PRINTS PR00160 Glutaredoxin signature 4 22 2.6E-19 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL504_RS27375 79b45697a7d8f35e9b3fe20557df2a53 175 Pfam PF09335 SNARE associated Golgi protein 44 167 5.0E-12 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL504_RS02390 fdee3034c9382229ace93c8a79a5f8f0 179 PIRSF PIRSF000239 18 179 2.3E-19 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS02390 fdee3034c9382229ace93c8a79a5f8f0 179 SUPERFAMILY SSF52833 21 179 4.08E-40 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS02390 fdee3034c9382229ace93c8a79a5f8f0 179 Pfam PF00578 AhpC/TSA family 25 153 2.5E-25 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS02390 fdee3034c9382229ace93c8a79a5f8f0 179 Gene3D G3DSA:3.40.30.10 13 173 5.4E-30 T 28-03-2018 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 Gene3D G3DSA:1.20.200.10 113 382 7.3E-51 T 28-03-2018 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 3.7E-7 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 3.7E-7 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 3.7E-7 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00149 Fumarate lyase superfamily signature 285 301 3.7E-7 T 28-03-2018 IPR000362 Fumarate lyase family AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 SUPERFAMILY SSF48557 40 477 3.77E-72 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 Pfam PF00206 Lyase 107 299 2.4E-26 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 Pfam PF14698 Argininosuccinate lyase C-terminal 376 452 7.4E-12 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 7.9E-15 T 28-03-2018 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 7.9E-15 T 28-03-2018 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00145 Argininosuccinate lyase family signature 285 301 7.9E-15 T 28-03-2018 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 7.9E-15 T 28-03-2018 AL504_RS22615 14552f7f66e9ea9ce9e075d9758e0ae1 515 Gene3D G3DSA:1.10.40.30 383 454 3.3E-14 T 28-03-2018 AL504_RS30140 34a1e7ac6bc40d07f7fad18070a63762 366 SUPERFAMILY SSF53474 64 209 5.67E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS30140 34a1e7ac6bc40d07f7fad18070a63762 366 Gene3D G3DSA:3.40.50.1820 14 343 1.7E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS30620 27e014c15b180c0979ef9b6f613776a9 216 Gene3D G3DSA:1.10.4010.10 1 216 9.2E-46 T 28-03-2018 AL504_RS30620 27e014c15b180c0979ef9b6f613776a9 216 Pfam PF08761 dUTPase 8 169 3.7E-24 T 28-03-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 AL504_RS30620 27e014c15b180c0979ef9b6f613776a9 216 SUPERFAMILY SSF101386 5 214 9.59E-50 T 28-03-2018 AL504_RS12125 c5938284e8e728d8a3a97a4ecb778e1b 359 PIRSF PIRSF005427 19 351 3.9E-97 T 28-03-2018 IPR005588 MucB/RseB AL504_RS12125 c5938284e8e728d8a3a97a4ecb778e1b 359 Gene3D G3DSA:2.50.20.10 55 240 3.4E-18 T 28-03-2018 AL504_RS12125 c5938284e8e728d8a3a97a4ecb778e1b 359 Pfam PF17188 MucB/RseB C-terminal domain 251 344 1.9E-24 T 28-03-2018 IPR033436 MucB/RseB, C-terminal AL504_RS12125 c5938284e8e728d8a3a97a4ecb778e1b 359 Pfam PF03888 MucB/RseB N-terminal domain 56 229 5.5E-59 T 28-03-2018 IPR033434 MucB/RseB, N-terminal AL504_RS13510 18b85f933f5b3b6c099abece15a1ed83 148 Gene3D G3DSA:3.40.630.30 1 132 1.7E-17 T 28-03-2018 AL504_RS13510 18b85f933f5b3b6c099abece15a1ed83 148 Pfam PF00583 Acetyltransferase (GNAT) family 32 131 4.8E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS13510 18b85f933f5b3b6c099abece15a1ed83 148 SUPERFAMILY SSF55729 6 132 1.06E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 Gene3D G3DSA:3.40.630.10 1 178 3.9E-31 T 28-03-2018 AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 SUPERFAMILY SSF53187 306 379 1.74E-58 T 28-03-2018 AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 SUPERFAMILY SSF53187 4 175 1.74E-58 T 28-03-2018 AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 SUPERFAMILY SSF55031 177 283 6.73E-21 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 102 139 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 7 379 3.1E-121 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 Pfam PF07687 Peptidase dimerisation domain 172 282 1.3E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 Gene3D G3DSA:3.30.70.360 179 308 1.3E-25 T 28-03-2018 AL504_RS12250 2a0f0623ce194da0ba68de21cc21ce4d 383 Pfam PF01546 Peptidase family M20/M25/M40 69 378 1.7E-39 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS19810 ab04410271e5ddd4cf19a4af7aba75bc 372 Pfam PF10531 SLBB domain 297 341 1.0E-9 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS19810 ab04410271e5ddd4cf19a4af7aba75bc 372 Pfam PF10531 SLBB domain 212 259 3.8E-7 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS19810 ab04410271e5ddd4cf19a4af7aba75bc 372 Gene3D G3DSA:3.10.560.10 201 293 3.4E-19 T 28-03-2018 AL504_RS19810 ab04410271e5ddd4cf19a4af7aba75bc 372 Gene3D G3DSA:3.30.1950.10 138 200 2.6E-13 T 28-03-2018 AL504_RS19810 ab04410271e5ddd4cf19a4af7aba75bc 372 Gene3D G3DSA:3.10.560.10 294 370 1.6E-13 T 28-03-2018 AL504_RS19810 ab04410271e5ddd4cf19a4af7aba75bc 372 Pfam PF02563 Polysaccharide biosynthesis/export protein 136 205 1.3E-15 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL504_RS03135 a6beaadccd5a6a8796cd8d783b770e77 380 SUPERFAMILY SSF53901 7 219 3.23E-17 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS03135 a6beaadccd5a6a8796cd8d783b770e77 380 SUPERFAMILY SSF53901 244 362 4.19E-16 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS03135 a6beaadccd5a6a8796cd8d783b770e77 380 PIRSF PIRSF000429 2 366 5.9E-17 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS03135 a6beaadccd5a6a8796cd8d783b770e77 380 Gene3D G3DSA:3.40.47.10 142 362 3.9E-22 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS03135 a6beaadccd5a6a8796cd8d783b770e77 380 Gene3D G3DSA:3.40.47.10 11 123 0.02 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS06640 bf8bcbec0c795f335f6be17e18e1e1f0 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 1.7E-40 T 28-03-2018 AL504_RS06640 bf8bcbec0c795f335f6be17e18e1e1f0 257 SUPERFAMILY SSF51735 5 256 2.88E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS06640 bf8bcbec0c795f335f6be17e18e1e1f0 257 Gene3D G3DSA:3.40.50.720 1 257 4.0E-49 T 28-03-2018 AL504_RS06640 bf8bcbec0c795f335f6be17e18e1e1f0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 6.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06640 bf8bcbec0c795f335f6be17e18e1e1f0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06640 bf8bcbec0c795f335f6be17e18e1e1f0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS06640 bf8bcbec0c795f335f6be17e18e1e1f0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 SUPERFAMILY SSF46785 1 84 3.68E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 SUPERFAMILY SSF53850 89 284 9.05E-39 T 28-03-2018 AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 Gene3D G3DSA:3.40.190.10 88 177 4.3E-24 T 28-03-2018 AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 Gene3D G3DSA:3.40.190.10 178 268 5.3E-27 T 28-03-2018 AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-24 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 Gene3D G3DSA:1.10.10.10 1 83 6.2E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.9E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.9E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.9E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS22060 f078c906f3fd84e8f5ef8732bba5a72e 292 Pfam PF03466 LysR substrate binding domain 87 286 7.4E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS22675 65e4157cad2461b09917683f37bc5f2b 279 Gene3D G3DSA:3.40.50.1820 16 278 2.0E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS22675 65e4157cad2461b09917683f37bc5f2b 279 Pfam PF07859 alpha/beta hydrolase fold 54 241 1.2E-16 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AL504_RS22675 65e4157cad2461b09917683f37bc5f2b 279 SUPERFAMILY SSF53474 11 268 8.18E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS05825 ed86203e838e041dcc351219611a8ec3 189 Gene3D G3DSA:3.40.50.850 2 189 3.4E-49 T 28-03-2018 AL504_RS05825 ed86203e838e041dcc351219611a8ec3 189 SUPERFAMILY SSF52499 4 188 1.7E-47 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS05825 ed86203e838e041dcc351219611a8ec3 189 Pfam PF00857 Isochorismatase family 11 182 7.5E-32 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 SUPERFAMILY SSF55021 686 760 1.22E-13 T 28-03-2018 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 Pfam PF02824 TGS domain 436 494 1.0E-20 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 Gene3D G3DSA:3.10.20.30 432 504 7.9E-22 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 SUPERFAMILY SSF109604 17 213 4.39E-42 T 28-03-2018 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 SMART SM00954 258 368 9.9E-64 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 Pfam PF04607 Region found in RelA / SpoT proteins 258 367 1.8E-37 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 Pfam PF13291 ACT domain 687 761 1.9E-15 T 28-03-2018 IPR002912 ACT domain AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 43 758 1.1E-162 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 Pfam PF13328 HD domain 36 199 3.8E-49 T 28-03-2018 IPR003607 HD/PDEase domain AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 SUPERFAMILY SSF81301 215 393 1.5E-62 T 28-03-2018 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 Gene3D G3DSA:3.30.460.10 215 348 7.7E-45 T 28-03-2018 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 SUPERFAMILY SSF81271 434 495 1.68E-18 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL504_RS12260 1e27ff2b4c37ae4c645a8836ebeaf942 762 Gene3D G3DSA:3.30.70.260 685 762 5.2E-13 T 28-03-2018 AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 Gene3D G3DSA:1.10.10.10 2 135 9.1E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 129 1.6E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 43 59 1.6E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 75 1.6E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 1.6E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 Pfam PF12802 MarR family 25 83 8.4E-15 T 28-03-2018 AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 SUPERFAMILY SSF46785 4 132 1.99E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24315 b04a6e9eab457a3b674a16a4e7967503 135 SMART SM00347 19 119 7.3E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS13605 de61e591de969c2d06009816afd22d83 267 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 27 240 1.5E-17 T 28-03-2018 AL504_RS04085 250db930e63e219a54fcf737997f7db2 171 Pfam PF08281 Sigma-70, region 4 109 157 8.6E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04085 250db930e63e219a54fcf737997f7db2 171 Pfam PF04542 Sigma-70 region 2 17 78 4.5E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04085 250db930e63e219a54fcf737997f7db2 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 159 8.1E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04085 250db930e63e219a54fcf737997f7db2 171 Gene3D G3DSA:1.10.1740.10 6 74 5.3E-11 T 28-03-2018 AL504_RS04085 250db930e63e219a54fcf737997f7db2 171 SUPERFAMILY SSF88659 92 166 5.01E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04085 250db930e63e219a54fcf737997f7db2 171 SUPERFAMILY SSF88946 7 74 1.96E-10 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS04085 250db930e63e219a54fcf737997f7db2 171 Gene3D G3DSA:1.10.10.10 75 167 1.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 Gene3D G3DSA:1.10.287.70 585 649 2.7E-10 T 28-03-2018 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 514 2.2E-136 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 158 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 130 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 1.8E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 Gene3D G3DSA:1.20.210.10 53 571 7.1E-187 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 SUPERFAMILY SSF81442 53 570 7.85E-178 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 12 656 0.0 T 28-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AL504_RS24630 be62c689a231b894fc3b9692a840b5fc 667 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS01420 a9c6f0328f55c5782657d3de43a24117 326 Pfam PF00248 Aldo/keto reductase family 16 317 2.3E-62 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS01420 a9c6f0328f55c5782657d3de43a24117 326 SUPERFAMILY SSF51430 1 321 4.58E-86 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS01420 a9c6f0328f55c5782657d3de43a24117 326 Gene3D G3DSA:3.20.20.100 1 325 4.1E-85 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS10580 37d3ea2f0f3dd6532c3ebdc5be987c42 394 Gene3D G3DSA:3.90.1150.10 278 392 2.3E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS10580 37d3ea2f0f3dd6532c3ebdc5be987c42 394 SUPERFAMILY SSF53383 1 389 2.02E-105 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS10580 37d3ea2f0f3dd6532c3ebdc5be987c42 394 Pfam PF00155 Aminotransferase class I and II 31 377 2.5E-55 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS10580 37d3ea2f0f3dd6532c3ebdc5be987c42 394 Gene3D G3DSA:3.40.640.10 42 277 1.9E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS15425 05890fc6e6e00d9cd1d199c7eda17ed1 126 Gene3D G3DSA:3.30.1460.10 4 122 3.3E-27 T 28-03-2018 AL504_RS15425 05890fc6e6e00d9cd1d199c7eda17ed1 126 SUPERFAMILY SSF69635 3 123 1.02E-10 T 28-03-2018 AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 SUPERFAMILY SSF46785 1 87 1.36E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 Pfam PF03466 LysR substrate binding domain 92 287 2.2E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 Gene3D G3DSA:1.10.10.10 1 88 4.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 Gene3D G3DSA:3.40.190.10 91 179 4.0E-19 T 28-03-2018 AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 1.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 Gene3D G3DSA:3.40.190.10 180 261 1.1E-18 T 28-03-2018 AL504_RS03535 8c7db16e99b76d4a31ea054865c89b01 314 SUPERFAMILY SSF53850 93 293 7.91E-36 T 28-03-2018 AL504_RS14495 7d7c4ad8b98aafd29b852ae417a0e489 214 Gene3D G3DSA:1.10.357.10 62 194 1.9E-20 T 28-03-2018 AL504_RS14495 7d7c4ad8b98aafd29b852ae417a0e489 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS14495 7d7c4ad8b98aafd29b852ae417a0e489 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.4E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS14495 7d7c4ad8b98aafd29b852ae417a0e489 214 SUPERFAMILY SSF46689 4 83 6.67E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS14495 7d7c4ad8b98aafd29b852ae417a0e489 214 SUPERFAMILY SSF48498 82 195 3.5E-26 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS14495 7d7c4ad8b98aafd29b852ae417a0e489 214 Gene3D G3DSA:1.10.10.60 1 61 5.9E-17 T 28-03-2018 AL504_RS21185 269a6ab97cb78b7a0a7bb3ea36c53a70 296 SUPERFAMILY SSF53850 90 295 7.29E-39 T 28-03-2018 AL504_RS21185 269a6ab97cb78b7a0a7bb3ea36c53a70 296 Gene3D G3DSA:3.40.190.10 90 178 3.2E-13 T 28-03-2018 AL504_RS21185 269a6ab97cb78b7a0a7bb3ea36c53a70 296 SUPERFAMILY SSF46785 3 113 8.55E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21185 269a6ab97cb78b7a0a7bb3ea36c53a70 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS21185 269a6ab97cb78b7a0a7bb3ea36c53a70 296 Gene3D G3DSA:1.10.10.10 1 85 3.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21185 269a6ab97cb78b7a0a7bb3ea36c53a70 296 Pfam PF03466 LysR substrate binding domain 90 293 1.5E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS21185 269a6ab97cb78b7a0a7bb3ea36c53a70 296 Gene3D G3DSA:3.40.190.10 179 265 4.1E-20 T 28-03-2018 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 SUPERFAMILY SSF56645 35 237 2.75E-48 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 22 413 2.6E-185 T 28-03-2018 IPR023922 Sulphate-starvation-induced SfnB AL504_RS17340 8e71837f414333750c78f925c8159df0 413 SUPERFAMILY SSF47203 251 412 1.26E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 254 388 7.5E-20 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AL504_RS17340 8e71837f414333750c78f925c8159df0 413 Gene3D G3DSA:1.10.540.10 26 137 1.1E-19 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 34 134 7.5E-13 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 149 228 2.2E-8 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 Gene3D G3DSA:2.40.110.10 138 235 4.6E-17 T 28-03-2018 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 Gene3D G3DSA:1.20.140.10 236 413 1.1E-24 T 28-03-2018 AL504_RS17340 8e71837f414333750c78f925c8159df0 413 PIRSF PIRSF016578 17 409 4.1E-31 T 28-03-2018 AL504_RS19660 1b208484b8ed467f5a33654ed9abd829 369 PIRSF PIRSF029644 2 364 4.4E-104 T 28-03-2018 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 AL504_RS19660 1b208484b8ed467f5a33654ed9abd829 369 Pfam PF01476 LysM domain 36 82 1.1E-7 T 28-03-2018 IPR018392 LysM domain AL504_RS19660 1b208484b8ed467f5a33654ed9abd829 369 Pfam PF04773 FecR protein 120 221 2.2E-16 T 28-03-2018 IPR006860 FecR protein AL504_RS19660 1b208484b8ed467f5a33654ed9abd829 369 SMART SM00257 35 82 0.0042 T 28-03-2018 IPR018392 LysM domain AL504_RS19660 1b208484b8ed467f5a33654ed9abd829 369 SUPERFAMILY SSF54106 34 82 3.53E-6 T 28-03-2018 IPR018392 LysM domain AL504_RS19660 1b208484b8ed467f5a33654ed9abd829 369 Gene3D G3DSA:3.10.350.10 31 84 1.1E-8 T 28-03-2018 AL504_RS12650 ea0cb82a5be8255070372dd7950ff6d0 489 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 468 6.7E-96 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS12650 ea0cb82a5be8255070372dd7950ff6d0 489 Pfam PF02321 Outer membrane efflux protein 287 466 2.7E-24 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS12650 ea0cb82a5be8255070372dd7950ff6d0 489 Pfam PF02321 Outer membrane efflux protein 68 257 4.6E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS12650 ea0cb82a5be8255070372dd7950ff6d0 489 SUPERFAMILY SSF56954 8 471 1.7E-105 T 28-03-2018 AL504_RS12650 ea0cb82a5be8255070372dd7950ff6d0 489 Gene3D G3DSA:1.20.1600.10 26 474 8.5E-98 T 28-03-2018 AL504_RS12685 6a873f708c908fede4e6488b13849c5c 513 SUPERFAMILY SSF56954 70 478 1.96E-85 T 28-03-2018 AL504_RS12685 6a873f708c908fede4e6488b13849c5c 513 SUPERFAMILY SSF56954 5 38 1.96E-85 T 28-03-2018 AL504_RS12685 6a873f708c908fede4e6488b13849c5c 513 Gene3D G3DSA:1.20.1600.10 24 484 6.9E-73 T 28-03-2018 AL504_RS12685 6a873f708c908fede4e6488b13849c5c 513 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 478 4.2E-99 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS12685 6a873f708c908fede4e6488b13849c5c 513 Pfam PF02321 Outer membrane efflux protein 297 477 1.4E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS12685 6a873f708c908fede4e6488b13849c5c 513 Pfam PF02321 Outer membrane efflux protein 79 269 1.4E-17 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS19270 e02209721f7e30bbfaea5f2af7c41ed2 352 Pfam PF01212 Beta-eliminating lyase 15 295 1.0E-76 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL504_RS19270 e02209721f7e30bbfaea5f2af7c41ed2 352 Gene3D G3DSA:3.90.1150.10 257 351 3.3E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS19270 e02209721f7e30bbfaea5f2af7c41ed2 352 SUPERFAMILY SSF53383 14 350 7.07E-94 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS19270 e02209721f7e30bbfaea5f2af7c41ed2 352 PIRSF PIRSF017617 5 352 1.3E-102 T 28-03-2018 IPR023603 Threonine aldolase AL504_RS19270 e02209721f7e30bbfaea5f2af7c41ed2 352 Gene3D G3DSA:3.40.640.10 9 256 2.6E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS31305 a2e243c6dba3a7855d6970b0aa225a5d 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 266 5.3E-46 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS31305 a2e243c6dba3a7855d6970b0aa225a5d 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL504_RS31305 a2e243c6dba3a7855d6970b0aa225a5d 267 Gene3D G3DSA:3.90.226.10 8 226 1.5E-57 T 28-03-2018 AL504_RS31305 a2e243c6dba3a7855d6970b0aa225a5d 267 Gene3D G3DSA:1.10.12.10 227 267 9.5E-17 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS31305 a2e243c6dba3a7855d6970b0aa225a5d 267 SUPERFAMILY SSF52096 8 267 2.6E-70 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS02730 1e529402905c20e5d6672f790c27b82b 338 Pfam PF01136 Peptidase family U32 83 337 4.0E-64 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL504_RS02730 1e529402905c20e5d6672f790c27b82b 338 SUPERFAMILY SSF51412 11 109 1.46E-5 T 28-03-2018 AL504_RS02730 1e529402905c20e5d6672f790c27b82b 338 ProSitePatterns PS01276 Peptidase family U32 signature. 168 186 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL504_RS02730 1e529402905c20e5d6672f790c27b82b 338 Gene3D G3DSA:3.20.20.150 8 324 5.8E-14 T 28-03-2018 AL504_RS00555 94da274efebeb86a13d7d8823920e39b 328 PIRSF PIRSF017082 1 326 2.4E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00555 94da274efebeb86a13d7d8823920e39b 328 Gene3D G3DSA:3.40.50.1980 20 139 0.003 T 28-03-2018 AL504_RS00555 94da274efebeb86a13d7d8823920e39b 328 Gene3D G3DSA:3.40.190.10 140 237 2.8E-5 T 28-03-2018 AL504_RS00555 94da274efebeb86a13d7d8823920e39b 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 320 2.9E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00555 94da274efebeb86a13d7d8823920e39b 328 SUPERFAMILY SSF53850 92 288 6.51E-9 T 28-03-2018 AL504_RS22105 67a45d6a6ef3003e3cc0bff54c05e660 126 Gene3D G3DSA:2.60.120.10 29 124 2.0E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS22105 67a45d6a6ef3003e3cc0bff54c05e660 126 Pfam PF07883 Cupin domain 55 115 7.6E-10 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS22105 67a45d6a6ef3003e3cc0bff54c05e660 126 SUPERFAMILY SSF51182 54 119 4.46E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS12895 271fc38007c26f2ac5aa710c0ebdf14d 329 Pfam PF04773 FecR protein 112 207 2.2E-20 T 28-03-2018 IPR006860 FecR protein AL504_RS12895 271fc38007c26f2ac5aa710c0ebdf14d 329 Pfam PF16220 Domain of unknown function (DUF4880) 17 57 7.7E-15 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS12895 271fc38007c26f2ac5aa710c0ebdf14d 329 PIRSF PIRSF018266 5 322 5.3E-94 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS28255 8979083b7f488739d82543574f1066cc 200 Pfam PF01381 Helix-turn-helix 136 190 1.7E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS28255 8979083b7f488739d82543574f1066cc 200 SMART SM00530 135 190 4.8E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS28255 8979083b7f488739d82543574f1066cc 200 SUPERFAMILY SSF47413 135 190 5.9E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS28255 8979083b7f488739d82543574f1066cc 200 Gene3D G3DSA:1.10.260.40 109 195 2.0E-11 T 28-03-2018 AL504_RS27135 4883d8b61ffc85564a1c722376a2b304 351 SUPERFAMILY SSF51445 13 328 7.58E-83 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS27135 4883d8b61ffc85564a1c722376a2b304 351 Gene3D G3DSA:3.20.20.300 11 347 3.3E-78 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL504_RS27135 4883d8b61ffc85564a1c722376a2b304 351 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 13 350 52.467 T 28-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL504_RS27135 4883d8b61ffc85564a1c722376a2b304 351 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 247 264 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AL504_RS27135 4883d8b61ffc85564a1c722376a2b304 351 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 15 303 1.8E-74 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL504_RS25400 ec7b00fae944f34789ad719589cf6c3a 174 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 18 32 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL504_RS25400 ec7b00fae944f34789ad719589cf6c3a 174 Pfam PF02417 Chromate transporter 8 169 3.4E-32 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL504_RS08250 f16fc2d1e5cfb4542bfefa1da11416ca 197 Pfam PF04366 Las17-binding protein actin regulator 110 193 3.6E-14 T 28-03-2018 IPR007461 Ysc84 actin-binding domain AL504_RS22035 542f0ecf6ab1d58e81889df03e933d3d 284 Pfam PF13560 Helix-turn-helix domain 7 86 9.7E-17 T 28-03-2018 AL504_RS22035 542f0ecf6ab1d58e81889df03e933d3d 284 SMART SM00530 11 83 1.6E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS22035 542f0ecf6ab1d58e81889df03e933d3d 284 Gene3D G3DSA:1.10.260.40 2 96 5.0E-13 T 28-03-2018 AL504_RS22035 542f0ecf6ab1d58e81889df03e933d3d 284 SUPERFAMILY SSF47413 31 81 8.28E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS22035 542f0ecf6ab1d58e81889df03e933d3d 284 Gene3D G3DSA:3.30.450.20 107 272 4.5E-4 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 Gene3D G3DSA:3.50.50.60 118 281 8.2E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 341 5.2E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 6.5E-8 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 6.5E-8 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 6.5E-8 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 6.4E-19 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 6.4E-19 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 6.4E-19 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 117 135 6.4E-19 T 28-03-2018 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 SUPERFAMILY SSF51905 3 347 2.88E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 Gene3D G3DSA:3.50.50.60 289 369 5.6E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS23455 1638d730b856d0857e016f30e020255c 439 Gene3D G3DSA:3.50.50.60 2 117 4.0E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS12395 f833ae99841543a045e82174d10bbdf2 186 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 3 180 3.9E-52 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL504_RS12395 f833ae99841543a045e82174d10bbdf2 186 Pfam PF04279 Intracellular septation protein A 3 178 8.5E-64 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL504_RS12395 f833ae99841543a045e82174d10bbdf2 186 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 2 179 18.209 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL504_RS11430 bcda8b7cb002da7f301da9cbf57f66af 373 Gene3D G3DSA:3.40.640.10 52 266 1.4E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS11430 bcda8b7cb002da7f301da9cbf57f66af 373 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL504_RS11430 bcda8b7cb002da7f301da9cbf57f66af 373 Gene3D G3DSA:3.90.1150.10 267 373 7.9E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS11430 bcda8b7cb002da7f301da9cbf57f66af 373 Pfam PF00155 Aminotransferase class I and II 40 361 9.1E-50 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS11430 bcda8b7cb002da7f301da9cbf57f66af 373 SUPERFAMILY SSF53383 19 370 7.37E-80 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS11430 bcda8b7cb002da7f301da9cbf57f66af 373 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 369 1.3E-102 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL504_RS11430 bcda8b7cb002da7f301da9cbf57f66af 373 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 371 60.389 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 SUPERFAMILY SSF55174 123 214 1.31E-17 T 28-03-2018 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 Pfam PF00849 RNA pseudouridylate synthase 185 318 2.8E-15 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 Gene3D G3DSA:3.10.290.10 122 180 1.0E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 Pfam PF01479 S4 domain 124 167 3.1E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 SMART SM00363 122 180 9.0E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 Gene3D G3DSA:3.30.70.1560 267 335 3.7E-20 T 28-03-2018 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 223 237 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 Gene3D G3DSA:3.30.70.580 181 266 1.2E-13 T 28-03-2018 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 SUPERFAMILY SSF55120 184 348 1.3E-38 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS11085 bafcda76db17787ab15f7ce3a604b3b2 611 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 189 349 9.4E-50 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 SUPERFAMILY SSF46785 6 78 8.46E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 SMART SM00895 84 209 4.1E-14 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 SUPERFAMILY SSF48008 80 216 1.94E-19 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 Gene3D G3DSA:1.20.120.530 76 218 3.0E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 3.8E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 Pfam PF07729 FCD domain 84 205 2.0E-19 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 SMART SM00345 16 74 1.0E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28800 64f4d27084745f3f01755c0a26a0312e 234 Gene3D G3DSA:1.10.10.10 2 75 4.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Pfam PF00128 Alpha amylase, catalytic domain 589 701 4.7E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Gene3D G3DSA:3.20.20.80 2 349 8.5E-5 T 28-03-2018 AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 SUPERFAMILY SSF51445 560 931 1.02E-89 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Gene3D G3DSA:1.20.58.280 469 546 7.7E-11 T 28-03-2018 AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Pfam PF11896 Domain of unknown function (DUF3416) 374 565 1.6E-54 T 28-03-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Gene3D G3DSA:2.60.40.10 371 468 4.0E-31 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Gene3D G3DSA:2.60.40.1180 935 1028 2.8E-15 T 28-03-2018 AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 371 1026 45.429 T 28-03-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 SMART SM00642 575 924 7.7E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29065 66541a919ccc1b0ecfac60f89278965e 1028 Gene3D G3DSA:3.20.20.80 566 934 1.8E-63 T 28-03-2018 AL504_RS20610 367895dfbc726930aec0bba7f0f43025 288 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 271 3.0E-36 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL504_RS20610 367895dfbc726930aec0bba7f0f43025 288 PIRSF PIRSF026649 1 280 5.1E-80 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL504_RS17715 d3342bf88d644c9171c0190787ec11b0 837 Pfam PF00593 TonB dependent receptor 401 835 1.2E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS17715 d3342bf88d644c9171c0190787ec11b0 837 Gene3D G3DSA:2.40.170.20 304 837 4.4E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS17715 d3342bf88d644c9171c0190787ec11b0 837 SUPERFAMILY SSF56935 142 837 1.4E-106 T 28-03-2018 AL504_RS17715 d3342bf88d644c9171c0190787ec11b0 837 Pfam PF07715 TonB-dependent Receptor Plug Domain 184 283 1.1E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS17715 d3342bf88d644c9171c0190787ec11b0 837 Gene3D G3DSA:2.170.130.10 140 303 1.1E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS17715 d3342bf88d644c9171c0190787ec11b0 837 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 186 837 2.4E-105 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS17715 d3342bf88d644c9171c0190787ec11b0 837 SMART SM00965 85 136 4.9E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS14570 72871b2794d38015cc976b8d331640e9 401 Gene3D G3DSA:1.10.10.60 122 246 0.001 T 28-03-2018 AL504_RS14725 627585f5720279fd05709c8302bec6a2 307 SUPERFAMILY SSF54211 143 281 5.39E-51 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS14725 627585f5720279fd05709c8302bec6a2 307 Gene3D G3DSA:3.30.1700.10 128 302 9.9E-68 T 28-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14725 627585f5720279fd05709c8302bec6a2 307 SUPERFAMILY SSF54211 3 125 4.32E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL504_RS14725 627585f5720279fd05709c8302bec6a2 307 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 283 45.304 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14725 627585f5720279fd05709c8302bec6a2 307 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 301 5.6E-119 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14725 627585f5720279fd05709c8302bec6a2 307 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 279 5.8E-105 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS14725 627585f5720279fd05709c8302bec6a2 307 Gene3D G3DSA:3.30.230.20 1 127 2.4E-46 T 28-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 SUPERFAMILY SSF81648 355 447 6.41E-20 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 PIRSF PIRSF038885 4 345 2.8E-133 T 28-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 PIRSF PIRSF038885 343 462 1.1E-23 T 28-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 Pfam PF00033 Cytochrome b/b6/petB 31 219 6.8E-68 T 28-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 286 434 1.8E-42 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 Gene3D G3DSA:1.20.810.10 15 455 4.3E-166 T 28-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 SUPERFAMILY SSF81342 15 288 1.88E-96 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL504_RS18075 c9cf579cb09bedceb9d49c7dcae6abd6 462 SUPERFAMILY SSF81648 290 336 2.16E-9 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL504_RS21020 43e754e8509a1bcfed8f53fc1187a883 349 Pfam PF02615 Malate/L-lactate dehydrogenase 3 335 6.6E-99 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS21020 43e754e8509a1bcfed8f53fc1187a883 349 Gene3D G3DSA:1.10.1530.10 2 79 4.5E-23 T 28-03-2018 AL504_RS21020 43e754e8509a1bcfed8f53fc1187a883 349 Gene3D G3DSA:3.30.1370.60 80 310 9.5E-78 T 28-03-2018 AL504_RS21020 43e754e8509a1bcfed8f53fc1187a883 349 SUPERFAMILY SSF89733 1 345 1.03E-97 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AL504_RS03635 95158ffce283a721fe17d67bd4aebc30 557 SUPERFAMILY SSF51905 487 536 5.12E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03635 95158ffce283a721fe17d67bd4aebc30 557 SUPERFAMILY SSF51905 106 292 5.12E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03635 95158ffce283a721fe17d67bd4aebc30 557 Gene3D G3DSA:3.50.50.60 91 541 3.9E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS03635 95158ffce283a721fe17d67bd4aebc30 557 PIRSF PIRSF038984 1 542 1.4E-234 T 28-03-2018 IPR028348 FAD dependent protein AL504_RS08115 a74c7709541aafb10577409802d89390 417 SUPERFAMILY SSF103473 20 416 1.96E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS08115 a74c7709541aafb10577409802d89390 417 Gene3D G3DSA:1.20.1250.20 228 415 2.7E-21 T 28-03-2018 AL504_RS08115 a74c7709541aafb10577409802d89390 417 Gene3D G3DSA:1.20.1250.20 30 225 2.5E-19 T 28-03-2018 AL504_RS08115 a74c7709541aafb10577409802d89390 417 Pfam PF07690 Major Facilitator Superfamily 40 268 7.5E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS18215 be7fd3b01882dac7d7317cd4cf009958 212 Gene3D G3DSA:3.40.50.300 1 210 1.6E-37 T 28-03-2018 AL504_RS18215 be7fd3b01882dac7d7317cd4cf009958 212 SUPERFAMILY SSF52540 1 210 2.65E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS18215 be7fd3b01882dac7d7317cd4cf009958 212 PIRSF PIRSF009320 1 210 8.6E-51 T 28-03-2018 AL504_RS18215 be7fd3b01882dac7d7317cd4cf009958 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 182 2.0E-14 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL504_RS14470 e65c5a1a77ecf598d8f97585cc7e26e2 811 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 155 808 4.2E-113 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS14470 e65c5a1a77ecf598d8f97585cc7e26e2 811 SMART SM00965 57 108 8.8E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS14470 e65c5a1a77ecf598d8f97585cc7e26e2 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 153 250 4.2E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS14470 e65c5a1a77ecf598d8f97585cc7e26e2 811 Gene3D G3DSA:2.40.170.20 263 810 2.1E-82 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS14470 e65c5a1a77ecf598d8f97585cc7e26e2 811 Gene3D G3DSA:2.170.130.10 110 262 1.4E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS14470 e65c5a1a77ecf598d8f97585cc7e26e2 811 Pfam PF00593 TonB dependent receptor 343 809 1.4E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS14470 e65c5a1a77ecf598d8f97585cc7e26e2 811 SUPERFAMILY SSF56935 113 810 2.14E-122 T 28-03-2018 AL504_RS03675 434059aea53eba90893175d32516cf64 889 Gene3D G3DSA:3.30.499.10 377 568 1.2E-53 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 Gene3D G3DSA:3.20.19.10 645 881 6.3E-77 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS03675 434059aea53eba90893175d32516cf64 889 Gene3D G3DSA:3.40.1060.10 246 376 5.7E-35 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 SUPERFAMILY SSF53732 28 616 3.01E-176 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 ProSitePatterns PS00450 Aconitase family signature 1. 419 435 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 SUPERFAMILY SSF52016 623 879 3.73E-73 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS03675 434059aea53eba90893175d32516cf64 889 Pfam PF00330 Aconitase family (aconitate hydratase) 87 554 3.0E-146 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 Pfam PF00694 Aconitase C-terminal domain 682 808 6.1E-39 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 880 6.1E-303 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 378 392 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 175 183 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 151 164 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 209 222 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 300 313 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 485 498 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 223 238 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 PRINTS PR00415 Aconitase family signature 423 434 4.7E-30 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS03675 434059aea53eba90893175d32516cf64 889 Gene3D G3DSA:3.30.499.10 51 245 7.1E-60 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL504_RS12400 813e922dcf35840ff7cfcf464767dc25 89 PIRSF PIRSF003113 1 89 1.4E-21 T 28-03-2018 IPR002634 BolA protein AL504_RS12400 813e922dcf35840ff7cfcf464767dc25 89 Pfam PF01722 BolA-like protein 17 89 1.5E-24 T 28-03-2018 IPR002634 BolA protein AL504_RS12400 813e922dcf35840ff7cfcf464767dc25 89 Gene3D G3DSA:3.30.300.90 3 89 7.1E-20 T 28-03-2018 AL504_RS12400 813e922dcf35840ff7cfcf464767dc25 89 SUPERFAMILY SSF82657 7 88 3.4E-20 T 28-03-2018 IPR002634 BolA protein AL504_RS27335 e4d2298e19bdc4c45d2684b447b59d18 316 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 151 272 2.3E-13 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL504_RS27335 e4d2298e19bdc4c45d2684b447b59d18 316 Gene3D G3DSA:3.40.50.2000 148 314 3.8E-26 T 28-03-2018 AL504_RS27335 e4d2298e19bdc4c45d2684b447b59d18 316 SUPERFAMILY SSF53756 10 309 7.85E-38 T 28-03-2018 AL504_RS27335 e4d2298e19bdc4c45d2684b447b59d18 316 Gene3D G3DSA:3.40.50.2000 5 147 1.6E-6 T 28-03-2018 AL504_RS15170 9fdbecf7960a9245d33628ce9bddc8d5 498 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 208 486 7.4E-62 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL504_RS15170 9fdbecf7960a9245d33628ce9bddc8d5 498 Gene3D G3DSA:3.40.190.10 201 327 2.2E-18 T 28-03-2018 AL504_RS15170 9fdbecf7960a9245d33628ce9bddc8d5 498 Pfam PF16868 NMT1-like family 225 486 4.7E-55 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL504_RS15170 9fdbecf7960a9245d33628ce9bddc8d5 498 SUPERFAMILY SSF53850 208 487 2.74E-57 T 28-03-2018 AL504_RS15170 9fdbecf7960a9245d33628ce9bddc8d5 498 Gene3D G3DSA:3.40.190.10 328 489 2.9E-24 T 28-03-2018 AL504_RS15920 8c7011712e50703e512ac9f244df9ff8 327 Gene3D G3DSA:3.40.50.1370 5 181 2.7E-15 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS15920 8c7011712e50703e512ac9f244df9ff8 327 Gene3D G3DSA:3.40.50.1370 182 321 8.3E-21 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS15920 8c7011712e50703e512ac9f244df9ff8 327 SUPERFAMILY SSF53671 14 323 7.08E-30 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL504_RS28635 be9fc2aeb58917e3ccf804d8f10d0adc 309 Pfam PF00482 Type II secretion system (T2SS), protein F 142 268 8.9E-14 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS19825 34dd8eae458e07d0d1cfb010ed463637 458 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 458 5.3E-135 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AL504_RS19825 34dd8eae458e07d0d1cfb010ed463637 458 Pfam PF13727 CoA-binding domain 61 229 4.0E-9 T 28-03-2018 AL504_RS19825 34dd8eae458e07d0d1cfb010ed463637 458 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 34 458 5.2E-124 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL504_RS19825 34dd8eae458e07d0d1cfb010ed463637 458 Pfam PF02397 Bacterial sugar transferase 265 452 1.7E-62 T 28-03-2018 IPR003362 Bacterial sugar transferase AL504_RS12615 e523da2a95f4462f756aaa30ad52a7e8 500 SUPERFAMILY SSF53850 21 497 1.96E-131 T 28-03-2018 AL504_RS12615 e523da2a95f4462f756aaa30ad52a7e8 500 Gene3D G3DSA:3.40.190.10 147 280 1.0E-36 T 28-03-2018 AL504_RS12615 e523da2a95f4462f756aaa30ad52a7e8 500 Gene3D G3DSA:3.90.76.10 47 146 6.4E-27 T 28-03-2018 AL504_RS12615 e523da2a95f4462f756aaa30ad52a7e8 500 Gene3D G3DSA:3.10.105.10 281 468 1.9E-47 T 28-03-2018 AL504_RS12615 e523da2a95f4462f756aaa30ad52a7e8 500 PIRSF PIRSF002741 8 496 3.0E-105 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS12615 e523da2a95f4462f756aaa30ad52a7e8 500 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 418 7.2E-87 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS07305 cdc21fa0d6558595777cd58e432dbc84 344 SUPERFAMILY SSF102198 77 118 4.32E-13 T 28-03-2018 AL504_RS07305 cdc21fa0d6558595777cd58e432dbc84 344 SUPERFAMILY SSF102198 165 343 4.32E-13 T 28-03-2018 AL504_RS07305 cdc21fa0d6558595777cd58e432dbc84 344 Gene3D G3DSA:3.50.30.50 41 344 5.1E-48 T 28-03-2018 AL504_RS07305 cdc21fa0d6558595777cd58e432dbc84 344 Pfam PF04199 Putative cyclase 86 272 1.9E-14 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS24765 394fd1b6445474f10d40a2059bc541ff 331 PIRSF PIRSF018266 7 331 4.4E-74 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS24765 394fd1b6445474f10d40a2059bc541ff 331 Pfam PF04773 FecR protein 124 213 3.7E-19 T 28-03-2018 IPR006860 FecR protein AL504_RS24765 394fd1b6445474f10d40a2059bc541ff 331 Pfam PF16344 Domain of unknown function (DUF4974) 247 315 9.1E-8 T 28-03-2018 IPR032508 Protein FecR, C-terminal AL504_RS24765 394fd1b6445474f10d40a2059bc541ff 331 Pfam PF16220 Domain of unknown function (DUF4880) 18 58 3.7E-7 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 Pfam PF13609 Gram-negative porin 6 364 4.3E-51 T 28-03-2018 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 PRINTS PR00184 Neisseria sp. porin signature 338 362 1.5E-5 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 PRINTS PR00184 Neisseria sp. porin signature 65 90 1.5E-5 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 341 358 3.6E-5 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 170 181 3.6E-5 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 63 74 3.6E-5 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 206 218 3.6E-5 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 107 117 3.6E-5 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 Gene3D G3DSA:2.40.160.10 8 384 2.4E-62 T 28-03-2018 AL504_RS05405 4521d5fb9e970dff49dbedf77e82b111 384 SUPERFAMILY SSF56935 20 384 3.66E-66 T 28-03-2018 AL504_RS20595 0d26899712a72a0034521c4eef4a3465 225 Gene3D G3DSA:3.30.450.40 41 219 1.0E-14 T 28-03-2018 IPR029016 GAF domain-like AL504_RS20595 0d26899712a72a0034521c4eef4a3465 225 Pfam PF04340 Protein of unknown function, DUF484 2 217 4.6E-29 T 28-03-2018 IPR007435 Protein of unknown function DUF484 AL504_RS20595 0d26899712a72a0034521c4eef4a3465 225 SUPERFAMILY SSF55781 86 217 3.36E-6 T 28-03-2018 IPR029016 GAF domain-like AL504_RS19260 a93ca79fa36d3e3db9fa27a3708c0434 94 SUPERFAMILY SSF54975 4 92 1.07E-24 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL504_RS19260 a93ca79fa36d3e3db9fa27a3708c0434 94 Pfam PF00708 Acylphosphatase 9 92 2.9E-23 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL504_RS19260 a93ca79fa36d3e3db9fa27a3708c0434 94 ProSitePatterns PS00151 Acylphosphatase signature 2. 37 53 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL504_RS19260 a93ca79fa36d3e3db9fa27a3708c0434 94 PRINTS PR00112 Acylphosphatase signature 8 23 2.1E-6 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL504_RS19260 a93ca79fa36d3e3db9fa27a3708c0434 94 PRINTS PR00112 Acylphosphatase signature 29 54 2.1E-6 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL504_RS19260 a93ca79fa36d3e3db9fa27a3708c0434 94 Gene3D G3DSA:3.30.70.100 1 94 1.8E-26 T 28-03-2018 AL504_RS09605 4408aeff8c242eabf80efb780d113959 140 Pfam PF13554 Bacteriophage related domain of unknown function 6 133 3.0E-40 T 28-03-2018 IPR025395 Protein of unknown function DUF4128 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 37 124 3.9E-25 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 PIRSF PIRSF006250 19 292 4.8E-92 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 Gene3D G3DSA:3.90.1170.20 9 151 1.2E-42 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 291 4.4E-97 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 SUPERFAMILY SSF54675 14 125 8.24E-33 T 28-03-2018 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 Gene3D G3DSA:3.20.20.70 152 282 9.9E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 SUPERFAMILY SSF51690 126 291 3.81E-57 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL504_RS15250 4d5e8d238fd6586449c6de134bf4eae2 292 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 126 291 6.3E-59 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL504_RS26125 9fa910ef478ea400dc33db59edf6def5 281 Gene3D G3DSA:3.40.50.1820 4 276 4.9E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS26125 9fa910ef478ea400dc33db59edf6def5 281 Pfam PF12697 Alpha/beta hydrolase family 39 262 2.0E-12 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS26125 9fa910ef478ea400dc33db59edf6def5 281 SUPERFAMILY SSF53474 23 267 7.84E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS02175 1b29956401d40db8017d8b9287e5a141 137 SUPERFAMILY SSF54909 1 120 1.23E-30 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS02175 1b29956401d40db8017d8b9287e5a141 137 Gene3D G3DSA:3.30.70.1060 1 120 1.2E-35 T 28-03-2018 AL504_RS02175 1b29956401d40db8017d8b9287e5a141 137 Pfam PF03795 YCII-related domain 1 113 1.0E-19 T 28-03-2018 IPR005545 YCII-related AL504_RS27625 a00db0247b6c5b1e67337466c3c361c6 172 SUPERFAMILY SSF88946 14 103 5.89E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27625 a00db0247b6c5b1e67337466c3c361c6 172 Pfam PF04542 Sigma-70 region 2 17 83 1.6E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27625 a00db0247b6c5b1e67337466c3c361c6 172 Gene3D G3DSA:1.10.1740.10 6 76 2.0E-13 T 28-03-2018 AL504_RS27625 a00db0247b6c5b1e67337466c3c361c6 172 SUPERFAMILY SSF88659 109 168 3.27E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27625 a00db0247b6c5b1e67337466c3c361c6 172 Pfam PF08281 Sigma-70, region 4 115 166 1.3E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS27625 a00db0247b6c5b1e67337466c3c361c6 172 Gene3D G3DSA:1.10.10.10 77 168 2.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27625 a00db0247b6c5b1e67337466c3c361c6 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 166 5.1E-20 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS11315 b0a7483e861b0210369f3a8b665f55b9 213 SUPERFAMILY SSF52833 4 210 5.51E-70 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS11315 b0a7483e861b0210369f3a8b665f55b9 213 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 191 1.7E-11 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS11315 b0a7483e861b0210369f3a8b665f55b9 213 Gene3D G3DSA:3.30.1020.10 153 213 3.7E-24 T 28-03-2018 AL504_RS11315 b0a7483e861b0210369f3a8b665f55b9 213 Pfam PF00578 AhpC/TSA family 7 136 7.2E-34 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS11315 b0a7483e861b0210369f3a8b665f55b9 213 PIRSF PIRSF000239 1 210 1.1E-79 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS11315 b0a7483e861b0210369f3a8b665f55b9 213 Gene3D G3DSA:3.40.30.10 1 152 2.3E-42 T 28-03-2018 AL504_RS25485 082a72babaa192d07cfc31cb40a9ad45 1196 Pfam PF05359 Domain of Unknown Function (DUF748) 450 575 3.1E-10 T 28-03-2018 IPR008023 Protein of unknown function DUF748 AL504_RS25485 082a72babaa192d07cfc31cb40a9ad45 1196 Pfam PF05359 Domain of Unknown Function (DUF748) 157 310 2.3E-20 T 28-03-2018 IPR008023 Protein of unknown function DUF748 AL504_RS25485 082a72babaa192d07cfc31cb40a9ad45 1196 Pfam PF05359 Domain of Unknown Function (DUF748) 802 948 5.7E-37 T 28-03-2018 IPR008023 Protein of unknown function DUF748 AL504_RS25485 082a72babaa192d07cfc31cb40a9ad45 1196 Pfam PF05359 Domain of Unknown Function (DUF748) 581 723 4.4E-21 T 28-03-2018 IPR008023 Protein of unknown function DUF748 AL504_RS25485 082a72babaa192d07cfc31cb40a9ad45 1196 Gene3D G3DSA:3.30.1330.60 1007 1185 2.1E-15 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 SUPERFAMILY SSF51735 7 237 5.33E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 236 1.7E-47 T 28-03-2018 AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 Gene3D G3DSA:3.40.50.720 145 237 2.6E-25 T 28-03-2018 AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 Gene3D G3DSA:3.40.50.720 1 144 9.7E-34 T 28-03-2018 AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 5.5E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 5.5E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.5E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 5.5E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 5.5E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS21850 d849f172b4616bd3b8879ff067073b41 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 5.5E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS03550 55d1d48fbaf6e7f027bb453bc880e33f 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 315 2.5E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03550 55d1d48fbaf6e7f027bb453bc880e33f 318 Gene3D G3DSA:1.10.3720.10 4 303 5.7E-42 T 28-03-2018 AL504_RS03550 55d1d48fbaf6e7f027bb453bc880e33f 318 SUPERFAMILY SSF161098 92 314 8.11E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16540 01065a6ec1ce0fd313cdef884a802c98 200 SUPERFAMILY SSF109604 4 181 2.04E-44 T 28-03-2018 AL504_RS16540 01065a6ec1ce0fd313cdef884a802c98 200 Gene3D G3DSA:1.10.3210.10 1 192 2.0E-46 T 28-03-2018 AL504_RS16540 01065a6ec1ce0fd313cdef884a802c98 200 Pfam PF13023 HD domain 14 177 5.7E-49 T 28-03-2018 IPR006674 HD domain AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 Pfam PF07715 TonB-dependent Receptor Plug Domain 157 256 2.3E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 Pfam PF00593 TonB dependent receptor 334 799 2.2E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 Gene3D G3DSA:2.170.130.10 117 268 1.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 Gene3D G3DSA:2.40.170.20 269 800 5.8E-87 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 SUPERFAMILY SSF56935 116 800 7.0E-138 T 28-03-2018 AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 SMART SM00965 61 112 1.3E-12 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 157 798 1.6E-115 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS06915 85cba60061e02c25bb8b3b0ce1a0bc79 800 Pfam PF07660 Secretin and TonB N terminus short domain 63 106 1.9E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS01295 5047972be1cb37b9ce230294ca3b792a 399 SUPERFAMILY SSF103473 25 395 6.41E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS01295 5047972be1cb37b9ce230294ca3b792a 399 Pfam PF07690 Major Facilitator Superfamily 229 392 1.9E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01295 5047972be1cb37b9ce230294ca3b792a 399 Pfam PF07690 Major Facilitator Superfamily 27 206 3.7E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01295 5047972be1cb37b9ce230294ca3b792a 399 Gene3D G3DSA:1.20.1250.20 214 396 8.3E-23 T 28-03-2018 AL504_RS01295 5047972be1cb37b9ce230294ca3b792a 399 Gene3D G3DSA:1.20.1250.20 16 213 3.2E-14 T 28-03-2018 AL504_RS20815 0ad4580699acf6bbd9705ab81b8fb094 149 Gene3D G3DSA:3.40.630.30 1 143 4.0E-26 T 28-03-2018 AL504_RS20815 0ad4580699acf6bbd9705ab81b8fb094 149 Pfam PF00583 Acetyltransferase (GNAT) family 43 134 8.9E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS20815 0ad4580699acf6bbd9705ab81b8fb094 149 SUPERFAMILY SSF55729 5 134 5.65E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS27085 fe70d27989ea6678f9af5c1132265648 228 SUPERFAMILY SSF52540 18 222 2.72E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27085 fe70d27989ea6678f9af5c1132265648 228 Pfam PF00005 ABC transporter 26 168 1.2E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS27085 fe70d27989ea6678f9af5c1132265648 228 Gene3D G3DSA:3.40.50.300 4 225 7.5E-55 T 28-03-2018 AL504_RS27085 fe70d27989ea6678f9af5c1132265648 228 SMART SM00382 27 218 1.6E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS27085 fe70d27989ea6678f9af5c1132265648 228 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS21945 09f4bc04a518280ccf8201262b6d660f 239 SMART SM00382 32 216 2.4E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS21945 09f4bc04a518280ccf8201262b6d660f 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS21945 09f4bc04a518280ccf8201262b6d660f 239 Pfam PF00005 ABC transporter 23 167 1.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21945 09f4bc04a518280ccf8201262b6d660f 239 SUPERFAMILY SSF52540 6 233 1.2E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS21945 09f4bc04a518280ccf8201262b6d660f 239 Gene3D G3DSA:3.40.50.300 4 237 4.6E-56 T 28-03-2018 AL504_RS22560 ab7ba5d2cc9fe77480b65dd4d4e3aef3 340 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 84 320 1.4E-35 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS22560 ab7ba5d2cc9fe77480b65dd4d4e3aef3 340 Gene3D G3DSA:3.90.850.10 24 309 8.0E-51 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS22560 ab7ba5d2cc9fe77480b65dd4d4e3aef3 340 SUPERFAMILY SSF56529 74 320 3.14E-55 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS28195 6076050ad90753ed34955fdcf2d98892 579 Pfam PF04185 Phosphoesterase family 83 548 3.6E-100 T 28-03-2018 IPR007312 Phosphoesterase GO:0016788 AL504_RS28195 6076050ad90753ed34955fdcf2d98892 579 TIGRFAM TIGR03397 acid_phos_Burk: acid phosphatase, Burkholderia-type 83 577 1.5E-224 T 28-03-2018 IPR017768 Acid phosphatase, AcpA GO:0003993 AL504_RS28195 6076050ad90753ed34955fdcf2d98892 579 Gene3D G3DSA:3.40.720.10 203 555 1.8E-24 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS28195 6076050ad90753ed34955fdcf2d98892 579 SUPERFAMILY SSF53649 210 271 2.09E-20 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS28195 6076050ad90753ed34955fdcf2d98892 579 SUPERFAMILY SSF53649 341 546 2.09E-20 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS17620 da19ad748181d84a972c422820261caa 413 SUPERFAMILY SSF103473 8 400 3.66E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS17620 da19ad748181d84a972c422820261caa 413 Gene3D G3DSA:1.20.1250.20 13 201 8.4E-21 T 28-03-2018 AL504_RS17620 da19ad748181d84a972c422820261caa 413 Pfam PF07690 Major Facilitator Superfamily 25 327 7.2E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS17620 da19ad748181d84a972c422820261caa 413 Gene3D G3DSA:1.20.1250.20 204 403 1.4E-15 T 28-03-2018 AL504_RS16900 50343d703440e78912aae6b7c2634108 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL504_RS16900 50343d703440e78912aae6b7c2634108 357 SUPERFAMILY SSF51726 5 354 1.62E-116 T 28-03-2018 AL504_RS16900 50343d703440e78912aae6b7c2634108 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL504_RS16900 50343d703440e78912aae6b7c2634108 357 Gene3D G3DSA:3.20.20.210 2 357 1.2E-103 T 28-03-2018 AL504_RS16900 50343d703440e78912aae6b7c2634108 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 11 349 1.2E-126 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL504_RS16900 50343d703440e78912aae6b7c2634108 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 8 352 48.845 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL504_RS16900 50343d703440e78912aae6b7c2634108 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 351 2.3E-131 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL504_RS25955 bb0a4a7534f1e5af87a04ee8611a6ab1 156 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 13 155 1.1E-51 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25955 bb0a4a7534f1e5af87a04ee8611a6ab1 156 Pfam PF06754 Phosphonate metabolism protein PhnG 14 154 1.7E-51 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS11050 356f184574476b7c5a3aa3564d78828e 130 Gene3D G3DSA:3.30.429.10 1 66 9.7E-10 T 28-03-2018 AL504_RS11050 356f184574476b7c5a3aa3564d78828e 130 Gene3D G3DSA:3.30.429.10 67 129 8.3E-11 T 28-03-2018 AL504_RS11050 356f184574476b7c5a3aa3564d78828e 130 SUPERFAMILY SSF55331 2 125 2.44E-21 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL504_RS09260 b252f54c8966d5fd89f8a067a3258b2e 134 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 39.389 T 28-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS09260 b252f54c8966d5fd89f8a067a3258b2e 134 Gene3D G3DSA:2.60.120.10 2 134 4.4E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS09260 b252f54c8966d5fd89f8a067a3258b2e 134 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 7.0E-63 T 28-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS09260 b252f54c8966d5fd89f8a067a3258b2e 134 Pfam PF06339 Ectoine synthase 1 126 1.2E-56 T 28-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL504_RS09260 b252f54c8966d5fd89f8a067a3258b2e 134 SUPERFAMILY SSF51182 1 128 5.29E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 180 0.0011 T 28-03-2018 AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 Pfam PF00106 short chain dehydrogenase 4 189 1.1E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 Gene3D G3DSA:3.40.50.720 2 254 4.1E-53 T 28-03-2018 AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 SUPERFAMILY SSF51735 3 246 3.27E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS26395 73c091bb792dbdd0f2c869afcb018678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS13100 b18c47d986f9c416c1ff1a328ac56993 818 SUPERFAMILY SSF52540 312 584 9.35E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13100 b18c47d986f9c416c1ff1a328ac56993 818 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 509 583 3.3E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS13100 b18c47d986f9c416c1ff1a328ac56993 818 Gene3D G3DSA:3.40.50.300 229 735 4.6E-21 T 28-03-2018 AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 Pfam PF01037 Lrp/AsnC ligand binding domain 73 141 9.6E-18 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 Pfam PF13404 AsnC-type helix-turn-helix domain 5 46 4.9E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 SMART SM00344 5 111 3.0E-22 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 SUPERFAMILY SSF46785 4 59 5.89E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 Gene3D G3DSA:1.10.10.10 1 56 3.0E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 SUPERFAMILY SSF54909 67 146 8.31E-18 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 4.5E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 4.5E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 4.5E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS10845 78a5187e1a3aeb0b5308b9abc9a7bab3 152 Gene3D G3DSA:3.30.70.920 61 149 8.1E-19 T 28-03-2018 AL504_RS11195 bde8dafc10972ed8eaf9f01ed10bc2b3 262 Gene3D G3DSA:3.90.226.10 1 213 3.8E-60 T 28-03-2018 AL504_RS11195 bde8dafc10972ed8eaf9f01ed10bc2b3 262 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 7 262 1.8E-134 T 28-03-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 AL504_RS11195 bde8dafc10972ed8eaf9f01ed10bc2b3 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 262 3.0E-59 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS11195 bde8dafc10972ed8eaf9f01ed10bc2b3 262 SUPERFAMILY SSF52096 1 261 7.21E-77 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS11195 bde8dafc10972ed8eaf9f01ed10bc2b3 262 Gene3D G3DSA:1.10.12.10 214 262 2.3E-17 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS23335 c7d8974b0bf44757384d9b2e95804da9 532 Gene3D G3DSA:1.20.1250.20 263 523 3.0E-30 T 28-03-2018 AL504_RS23335 c7d8974b0bf44757384d9b2e95804da9 532 SUPERFAMILY SSF103473 260 436 3.92E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS23335 c7d8974b0bf44757384d9b2e95804da9 532 SUPERFAMILY SSF103473 25 213 3.92E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS23335 c7d8974b0bf44757384d9b2e95804da9 532 Gene3D G3DSA:1.20.1250.20 18 210 3.6E-32 T 28-03-2018 AL504_RS23335 c7d8974b0bf44757384d9b2e95804da9 532 Pfam PF07690 Major Facilitator Superfamily 29 421 2.2E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS23335 c7d8974b0bf44757384d9b2e95804da9 532 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 491 1.3E-70 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL504_RS15130 6933de45c9b0f9db250ddb3ea42ddae3 161 Pfam PF05232 Chlorhexidine efflux transporter 74 137 1.1E-26 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter AL504_RS15130 6933de45c9b0f9db250ddb3ea42ddae3 161 Pfam PF05232 Chlorhexidine efflux transporter 6 69 2.3E-24 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter AL504_RS14205 ff7cdb2eb79b788400255bef7124e638 316 Pfam PF01715 IPP transferase 41 289 2.8E-87 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL504_RS14205 ff7cdb2eb79b788400255bef7124e638 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 291 4.2E-92 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL504_RS14205 ff7cdb2eb79b788400255bef7124e638 316 SUPERFAMILY SSF52540 8 150 9.55E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14205 ff7cdb2eb79b788400255bef7124e638 316 Gene3D G3DSA:3.40.50.300 4 196 6.1E-60 T 28-03-2018 AL504_RS14205 ff7cdb2eb79b788400255bef7124e638 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 306 29.251 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL504_RS14205 ff7cdb2eb79b788400255bef7124e638 316 Gene3D G3DSA:1.10.287.890 205 287 6.6E-27 T 28-03-2018 AL504_RS05350 50e948c4a3e38a624a866546c7afa413 74 Gene3D G3DSA:3.10.290.10 1 73 5.5E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS05350 50e948c4a3e38a624a866546c7afa413 74 SUPERFAMILY SSF55174 6 72 3.79E-16 T 28-03-2018 AL504_RS05350 50e948c4a3e38a624a866546c7afa413 74 Pfam PF13275 S4 domain 13 71 2.8E-20 T 28-03-2018 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 Gene3D G3DSA:1.20.140.10 222 388 3.6E-47 T 28-03-2018 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 4.2E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 Gene3D G3DSA:1.10.540.10 1 123 3.2E-34 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 365 5.1E-38 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 219 7.9E-21 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 Gene3D G3DSA:2.40.110.10 124 221 1.3E-29 T 28-03-2018 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 SUPERFAMILY SSF47203 231 386 2.09E-47 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS06265 7b58baeb771e5713d67c830015b980aa 388 SUPERFAMILY SSF56645 1 246 7.72E-65 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS00255 4496f0f760ae59b3b6edda0e36ff0c5c 204 Gene3D G3DSA:3.40.50.300 1 202 3.7E-39 T 28-03-2018 AL504_RS00255 4496f0f760ae59b3b6edda0e36ff0c5c 204 SUPERFAMILY SSF52540 2 193 1.6E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS00255 4496f0f760ae59b3b6edda0e36ff0c5c 204 Pfam PF00005 ABC transporter 34 157 1.9E-13 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS21335 8a0d9625c1f0d6fce6702a1a47194471 489 PIRSF PIRSF006247 1 489 5.2E-159 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL504_RS21335 8a0d9625c1f0d6fce6702a1a47194471 489 Pfam PF02386 Cation transport protein 38 483 1.7E-61 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL504_RS21335 8a0d9625c1f0d6fce6702a1a47194471 489 Gene3D G3DSA:1.20.1070.10 41 455 0.0046 T 28-03-2018 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Gene3D G3DSA:3.40.50.300 22 425 3.7E-30 T 28-03-2018 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Pfam PF02151 UvrB/uvrC motif 636 669 1.7E-4 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 SMART SM00490 470 556 6.2E-20 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 SUPERFAMILY SSF52540 15 425 3.51E-135 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Gene3D G3DSA:4.10.860.10 600 675 5.3E-11 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Hamap MF_00204 UvrABC system protein B [uvrB]. 14 670 42.664 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 16 668 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Pfam PF12344 Ultra-violet resistance protein B 562 604 7.4E-20 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 SUPERFAMILY SSF52540 48 93 3.9E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 SUPERFAMILY SSF52540 469 592 3.9E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 SUPERFAMILY SSF46600 632 670 1.23E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Pfam PF00271 Helicase conserved C-terminal domain 454 554 2.2E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 SMART SM00487 20 435 6.9E-28 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Gene3D G3DSA:3.40.50.300 426 599 7.9E-32 T 28-03-2018 AL504_RS31245 33eb8f85c85d7ce9afbe8570f4d0aa94 677 Pfam PF04851 Type III restriction enzyme, res subunit 50 148 1.9E-8 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL504_RS00850 daa9252a1ef91e181e21a277be8da434 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 264 2.6E-53 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS00850 daa9252a1ef91e181e21a277be8da434 265 Gene3D G3DSA:1.10.12.10 223 265 5.1E-19 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS00850 daa9252a1ef91e181e21a277be8da434 265 SUPERFAMILY SSF52096 11 265 1.49E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS00850 daa9252a1ef91e181e21a277be8da434 265 Gene3D G3DSA:3.90.226.10 13 222 7.8E-62 T 28-03-2018 AL504_RS27165 49a7d95de8b07f3dccecbb5cf2a5dfc0 334 Pfam PF03150 Di-haem cytochrome c peroxidase 42 189 3.2E-53 T 28-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL504_RS27165 49a7d95de8b07f3dccecbb5cf2a5dfc0 334 SUPERFAMILY SSF46626 176 328 2.57E-42 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27165 49a7d95de8b07f3dccecbb5cf2a5dfc0 334 PIRSF PIRSF000294 4 331 6.1E-133 T 28-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL504_RS27165 49a7d95de8b07f3dccecbb5cf2a5dfc0 334 SUPERFAMILY SSF46626 25 177 1.11E-51 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27165 49a7d95de8b07f3dccecbb5cf2a5dfc0 334 Pfam PF00034 Cytochrome c 198 307 8.8E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27165 49a7d95de8b07f3dccecbb5cf2a5dfc0 334 Gene3D G3DSA:1.10.760.10 30 193 6.2E-46 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27165 49a7d95de8b07f3dccecbb5cf2a5dfc0 334 Gene3D G3DSA:1.10.760.10 194 316 1.6E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS16710 5313d215fc5668394d4f96c52dfe58cf 304 Gene3D G3DSA:1.10.3470.10 1 297 8.7E-49 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS16710 5313d215fc5668394d4f96c52dfe58cf 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 291 7.2E-40 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 Gene3D G3DSA:2.40.110.10 197 310 9.7E-15 T 28-03-2018 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 SUPERFAMILY SSF47203 321 468 1.01E-24 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 93 194 7.8E-20 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 Gene3D G3DSA:1.20.140.10 311 470 3.9E-22 T 28-03-2018 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 SUPERFAMILY SSF56645 81 316 2.62E-46 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 Pfam PF09317 Domain of unknown function (DUF1974) 475 763 1.1E-116 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 321 468 3.1E-13 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS28385 bc4539236e28db6f717e7c56ae467e13 782 Gene3D G3DSA:1.10.540.10 36 196 2.9E-33 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS04000 4c6e6f418d3a7341c6dcc919bda3741b 366 SUPERFAMILY SSF51735 7 135 1.21E-13 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS04000 4c6e6f418d3a7341c6dcc919bda3741b 366 Gene3D G3DSA:3.40.50.720 4 196 1.5E-17 T 28-03-2018 AL504_RS04000 4c6e6f418d3a7341c6dcc919bda3741b 366 Gene3D G3DSA:1.10.1040.10 197 349 2.2E-32 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL504_RS04000 4c6e6f418d3a7341c6dcc919bda3741b 366 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 187 330 3.3E-30 T 28-03-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 AL504_RS04000 4c6e6f418d3a7341c6dcc919bda3741b 366 Pfam PF02558 Ketopantoate reductase PanE/ApbA 8 105 1.3E-7 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL504_RS04000 4c6e6f418d3a7341c6dcc919bda3741b 366 SUPERFAMILY SSF48179 189 359 7.82E-36 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL504_RS09405 9b9f9c917610bdfee82f043e9860e501 475 Pfam PF02321 Outer membrane efflux protein 57 248 2.6E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS09405 9b9f9c917610bdfee82f043e9860e501 475 Pfam PF02321 Outer membrane efflux protein 280 451 2.5E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS09405 9b9f9c917610bdfee82f043e9860e501 475 SUPERFAMILY SSF56954 1 461 3.53E-94 T 28-03-2018 AL504_RS09405 9b9f9c917610bdfee82f043e9860e501 475 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 458 1.8E-120 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS09405 9b9f9c917610bdfee82f043e9860e501 475 Gene3D G3DSA:1.20.1600.10 16 463 7.6E-86 T 28-03-2018 AL504_RS30495 8046d45829bd6e526b3e647c82627a4c 362 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 335 1.1E-52 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS30495 8046d45829bd6e526b3e647c82627a4c 362 Gene3D G3DSA:1.10.3470.10 27 341 1.3E-48 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS06480 f907725763300db7add9d09a48306d6d 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 3.5E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 3.5E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 3.5E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 3.5E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 3.5E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 3.5E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 Pfam PF00771 FHIPEP family 28 691 5.7E-271 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 PIRSF PIRSF005419 3 704 7.0E-245 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 20 700 9.3E-272 T 28-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AL504_RS06480 f907725763300db7add9d09a48306d6d 706 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 144 167 - T 28-03-2018 IPR025505 FHIPEP conserved site AL504_RS07700 685ded6ed062aea5b4571bb6e788a733 166 SUPERFAMILY SSF50475 6 165 1.03E-40 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS07700 685ded6ed062aea5b4571bb6e788a733 166 SMART SM00903 20 164 3.3E-48 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS07700 685ded6ed062aea5b4571bb6e788a733 166 Pfam PF01613 Flavin reductase like domain 21 164 3.7E-33 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS07700 685ded6ed062aea5b4571bb6e788a733 166 Gene3D G3DSA:2.30.110.10 8 166 1.2E-37 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS07605 576bfe9b36b8bc1624661f464b4bbc67 184 Pfam PF03918 Cytochrome C biogenesis protein 28 165 1.3E-43 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL504_RS29890 b11687535fad42bff3368456eacd69fe 325 PIRSF PIRSF017082 1 325 1.5E-72 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29890 b11687535fad42bff3368456eacd69fe 325 Gene3D G3DSA:3.40.190.10 126 252 1.2E-7 T 28-03-2018 AL504_RS29890 b11687535fad42bff3368456eacd69fe 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 322 4.2E-68 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29890 b11687535fad42bff3368456eacd69fe 325 SUPERFAMILY SSF53850 113 287 1.32E-7 T 28-03-2018 AL504_RS14785 5bc231f19d80ef3cbc7777281de74ce8 96 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 14.958 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL504_RS14785 5bc231f19d80ef3cbc7777281de74ce8 96 Pfam PF04999 Cell division protein FtsL 2 82 7.4E-18 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL504_RS14785 5bc231f19d80ef3cbc7777281de74ce8 96 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 83 2.0E-24 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL504_RS26175 249a461024cf70af5eab31242b56029a 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 309 2.2E-28 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 SUPERFAMILY SSF53850 94 288 1.07E-25 T 28-03-2018 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 Gene3D G3DSA:3.40.190.10 90 179 8.2E-12 T 28-03-2018 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 Gene3D G3DSA:3.40.190.10 180 258 2.1E-9 T 28-03-2018 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 Gene3D G3DSA:1.10.10.10 1 84 4.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 SUPERFAMILY SSF46785 4 86 6.22E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01670 19125f0c379fbf1ae656c2863eaf9b18 291 Pfam PF03466 LysR substrate binding domain 90 281 2.5E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS11215 fe452a6ba9c9a2241ebbe1876548b69a 254 SUPERFAMILY SSF47240 3 248 2.76E-81 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS11215 fe452a6ba9c9a2241ebbe1876548b69a 254 PIRSF PIRSF037834 1 254 5.4E-100 T 28-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AL504_RS11215 fe452a6ba9c9a2241ebbe1876548b69a 254 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 12 254 1.6E-86 T 28-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AL504_RS11215 fe452a6ba9c9a2241ebbe1876548b69a 254 Pfam PF05138 Phenylacetic acid catabolic protein 3 254 3.1E-96 T 28-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AL504_RS11215 fe452a6ba9c9a2241ebbe1876548b69a 254 Gene3D G3DSA:1.20.1260.10 1 254 1.2E-73 T 28-03-2018 IPR012347 Ferritin-related AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 Gene3D G3DSA:3.40.250.10 158 283 1.0E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 Pfam PF00581 Rhodanese-like domain 159 273 2.8E-7 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 Pfam PF00581 Rhodanese-like domain 7 129 1.4E-18 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 SUPERFAMILY SSF52821 160 282 2.88E-31 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 SMART SM00450 6 132 1.1E-22 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 SMART SM00450 157 277 2.7E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 Gene3D G3DSA:3.40.250.10 1 150 1.4E-33 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS10975 d5adc715197ce6ac4c685c006a0cbdf5 283 SUPERFAMILY SSF52821 2 145 3.93E-44 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS23870 7c2a6de772aa60749cbea316db605c03 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 318 2.5E-71 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS23870 7c2a6de772aa60749cbea316db605c03 334 SUPERFAMILY SSF53850 125 296 7.87E-12 T 28-03-2018 AL504_RS23870 7c2a6de772aa60749cbea316db605c03 334 PIRSF PIRSF017082 4 330 2.0E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS23870 7c2a6de772aa60749cbea316db605c03 334 Gene3D G3DSA:3.40.190.10 134 242 4.6E-12 T 28-03-2018 AL504_RS16850 1391b4868e71b6d43539189225de5c8a 301 Pfam PF00326 Prolyl oligopeptidase family 123 181 5.1E-5 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL504_RS16850 1391b4868e71b6d43539189225de5c8a 301 SUPERFAMILY SSF53474 33 271 5.61E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16850 1391b4868e71b6d43539189225de5c8a 301 Gene3D G3DSA:3.40.50.1820 1 301 6.1E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 SUPERFAMILY SSF46955 13 136 1.1E-28 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 SMART SM00422 13 81 3.2E-23 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 13 152 7.5E-61 T 28-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 Gene3D G3DSA:1.10.1660.10 70 137 1.4E-12 T 28-03-2018 AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 Pfam PF09278 MerR, DNA binding 56 121 1.1E-17 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 Gene3D G3DSA:1.10.1660.10 9 69 2.4E-19 T 28-03-2018 AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 Pfam PF00376 MerR family regulatory protein 14 50 5.5E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 2.2E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 2.2E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS04025 fb7d833eaab4bb5887895055a37bd35d 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 2.2E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 SMART SM00344 4 113 3.2E-47 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 3.9E-18 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.4E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.4E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.4E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 SUPERFAMILY SSF54909 66 153 2.41E-17 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 Gene3D G3DSA:3.30.70.920 57 150 4.9E-23 T 28-03-2018 AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 SUPERFAMILY SSF46785 4 63 9.52E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.2E-19 T 28-03-2018 AL504_RS05340 9a73a58b1172a6c00e2916bae97ba533 155 Gene3D G3DSA:1.10.10.10 4 55 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05525 876abddb11cce036cb5b905ddf7f5436 162 SUPERFAMILY SSF55826 3 157 2.88E-35 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS05525 876abddb11cce036cb5b905ddf7f5436 162 Gene3D G3DSA:3.90.960.10 1 161 2.6E-36 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS05525 876abddb11cce036cb5b905ddf7f5436 162 Pfam PF04073 Aminoacyl-tRNA editing domain 23 148 2.6E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS19575 4ee7361f4528aa0e80090071cef0827c 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 2.2E-116 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL504_RS19575 4ee7361f4528aa0e80090071cef0827c 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 180 208 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL504_RS19575 4ee7361f4528aa0e80090071cef0827c 387 Gene3D G3DSA:1.20.1090.10 191 387 4.9E-55 T 28-03-2018 AL504_RS19575 4ee7361f4528aa0e80090071cef0827c 387 Gene3D G3DSA:3.40.50.1970 11 190 4.4E-47 T 28-03-2018 AL504_RS19575 4ee7361f4528aa0e80090071cef0827c 387 SUPERFAMILY SSF56796 6 385 4.06E-123 T 28-03-2018 AL504_RS21965 2843f23e302db3aee950af2636bae0db 411 Pfam PF13458 Periplasmic binding protein 23 372 2.8E-69 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS21965 2843f23e302db3aee950af2636bae0db 411 Gene3D G3DSA:3.40.50.2300 177 363 6.4E-16 T 28-03-2018 AL504_RS21965 2843f23e302db3aee950af2636bae0db 411 Gene3D G3DSA:3.40.50.2300 12 176 6.4E-20 T 28-03-2018 AL504_RS21965 2843f23e302db3aee950af2636bae0db 411 SUPERFAMILY SSF53822 23 378 8.63E-67 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS04980 ff40b68e1ef9902d1296be2c796860c6 355 SUPERFAMILY SSF56935 22 355 1.67E-71 T 28-03-2018 AL504_RS04980 ff40b68e1ef9902d1296be2c796860c6 355 Gene3D G3DSA:2.40.160.10 24 355 3.4E-63 T 28-03-2018 AL504_RS04980 ff40b68e1ef9902d1296be2c796860c6 355 Pfam PF13609 Gram-negative porin 9 332 2.9E-44 T 28-03-2018 AL504_RS28030 7efd39d274727d59bcdb5d3e1769649d 301 SMART SM00382 30 210 5.8E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS28030 7efd39d274727d59bcdb5d3e1769649d 301 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS28030 7efd39d274727d59bcdb5d3e1769649d 301 Pfam PF00005 ABC transporter 22 161 3.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS28030 7efd39d274727d59bcdb5d3e1769649d 301 SUPERFAMILY SSF52540 6 223 1.07E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28030 7efd39d274727d59bcdb5d3e1769649d 301 Gene3D G3DSA:3.40.50.300 2 249 1.4E-62 T 28-03-2018 AL504_RS20570 68ba7da955e1de801ae1456f324a0025 288 Pfam PF00950 ABC 3 transport family 14 272 1.3E-52 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL504_RS20570 68ba7da955e1de801ae1456f324a0025 288 Gene3D G3DSA:1.10.3470.10 4 273 1.3E-22 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS20570 68ba7da955e1de801ae1456f324a0025 288 SUPERFAMILY SSF81345 11 270 3.27E-25 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS05415 870315e34463f5367808953b995ff692 166 Pfam PF12833 Helix-turn-helix domain 46 124 4.7E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS05415 870315e34463f5367808953b995ff692 166 SUPERFAMILY SSF46689 76 126 1.66E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS05415 870315e34463f5367808953b995ff692 166 SUPERFAMILY SSF46689 24 73 1.25E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS05415 870315e34463f5367808953b995ff692 166 Gene3D G3DSA:1.10.10.60 78 134 1.1E-13 T 28-03-2018 AL504_RS05415 870315e34463f5367808953b995ff692 166 SMART SM00342 40 123 9.4E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS05415 870315e34463f5367808953b995ff692 166 Gene3D G3DSA:1.10.10.60 21 77 2.5E-15 T 28-03-2018 AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 33 464 4.1E-157 T 28-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 273 310 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 SUPERFAMILY SSF53383 40 459 7.69E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 PIRSF PIRSF000521 126 462 1.1E-33 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 PIRSF PIRSF000521 34 153 1.3E-4 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 Pfam PF00202 Aminotransferase class-III 50 459 1.1E-91 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 Gene3D G3DSA:3.90.1150.10 341 471 2.6E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS03245 a5d12d587ebea3eed9809ab3ddb30404 488 Gene3D G3DSA:3.40.640.10 77 340 4.0E-70 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS08075 7fa51a9d690fac3796d86030a15d4412 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 131 2.9E-15 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL504_RS08075 7fa51a9d690fac3796d86030a15d4412 141 Gene3D G3DSA:3.10.129.10 8 136 1.1E-33 T 28-03-2018 AL504_RS08075 7fa51a9d690fac3796d86030a15d4412 141 SUPERFAMILY SSF54637 11 137 3.49E-34 T 28-03-2018 IPR029069 HotDog domain AL504_RS08075 7fa51a9d690fac3796d86030a15d4412 141 Pfam PF03061 Thioesterase superfamily 50 125 2.7E-15 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS29490 39b79ea4591a8856227524d0ebd01a28 282 Pfam PF08386 TAP-like protein 192 277 4.9E-5 T 28-03-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AL504_RS29490 39b79ea4591a8856227524d0ebd01a28 282 Gene3D G3DSA:3.40.50.1820 51 282 3.3E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29490 39b79ea4591a8856227524d0ebd01a28 282 Pfam PF12146 Serine aminopeptidase, S33 72 164 5.5E-9 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS29490 39b79ea4591a8856227524d0ebd01a28 282 SUPERFAMILY SSF53474 20 269 9.5E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS06680 f912deafe7877384949708c3041f7b79 172 Pfam PF08241 Methyltransferase domain 5 50 1.1E-4 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL504_RS06680 f912deafe7877384949708c3041f7b79 172 SUPERFAMILY SSF53335 4 131 3.45E-14 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS06680 f912deafe7877384949708c3041f7b79 172 Gene3D G3DSA:3.40.50.150 1 171 4.6E-15 T 28-03-2018 AL504_RS07225 1560cde39f7d9e33a88f7041c61c1f7c 119 Pfam PF03479 Domain of unknown function (DUF296) 4 114 4.8E-14 T 28-03-2018 IPR005175 PPC domain AL504_RS07225 1560cde39f7d9e33a88f7041c61c1f7c 119 SUPERFAMILY SSF117856 2 114 8.89E-19 T 28-03-2018 AL504_RS07225 1560cde39f7d9e33a88f7041c61c1f7c 119 Gene3D G3DSA:3.30.1330.80 2 117 5.1E-17 T 28-03-2018 AL504_RS13505 76119381a720e7d49786dc0d55c3ed01 212 Pfam PF02525 Flavodoxin-like fold 1 194 1.6E-34 T 28-03-2018 IPR003680 Flavodoxin-like fold AL504_RS13505 76119381a720e7d49786dc0d55c3ed01 212 SUPERFAMILY SSF52218 1 201 2.62E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS13505 76119381a720e7d49786dc0d55c3ed01 212 Gene3D G3DSA:3.40.50.360 1 207 2.1E-35 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS13505 76119381a720e7d49786dc0d55c3ed01 212 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 200 22.952 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AL504_RS02570 15abc117bd152b537762eb9dc8cad8cf 385 Gene3D G3DSA:3.20.20.70 7 381 4.7E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS02570 15abc117bd152b537762eb9dc8cad8cf 385 Pfam PF03060 Nitronate monooxygenase 16 333 9.5E-29 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS02570 15abc117bd152b537762eb9dc8cad8cf 385 SUPERFAMILY SSF51412 15 51 9.01E-31 T 28-03-2018 AL504_RS02570 15abc117bd152b537762eb9dc8cad8cf 385 SUPERFAMILY SSF51412 90 312 9.01E-31 T 28-03-2018 AL504_RS02570 15abc117bd152b537762eb9dc8cad8cf 385 SUPERFAMILY SSF51412 341 357 9.01E-31 T 28-03-2018 AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 Pfam PF06481 COX Aromatic Rich Motif 244 289 5.5E-21 T 28-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 11 243 1.4E-107 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 Gene3D G3DSA:2.60.40.420 119 285 1.7E-49 T 28-03-2018 IPR008972 Cupredoxin AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 SUPERFAMILY SSF49503 128 286 2.6E-50 T 28-03-2018 IPR008972 Cupredoxin AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 PIRSF PIRSF000292 3 313 4.9E-125 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 Gene3D G3DSA:1.10.287.90 25 110 6.8E-18 T 28-03-2018 AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 SUPERFAMILY SSF81464 26 114 4.91E-23 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS24635 94ad9d7a07bd336b5639d2346c0418e2 347 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 157 224 3.0E-6 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS30585 6475c4bf5ad42545b07979af738f23b4 314 Gene3D G3DSA:3.30.1780.10 1 133 5.2E-38 T 28-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL504_RS30585 6475c4bf5ad42545b07979af738f23b4 314 Gene3D G3DSA:3.40.50.720 134 293 7.0E-33 T 28-03-2018 AL504_RS30585 6475c4bf5ad42545b07979af738f23b4 314 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 6 311 5.1E-69 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS30585 6475c4bf5ad42545b07979af738f23b4 314 PIRSF PIRSF001439 1 313 1.4E-72 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL504_RS30585 6475c4bf5ad42545b07979af738f23b4 314 SUPERFAMILY SSF51735 1 309 2.12E-92 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS15030 4914f7827efaab2b33a25445e3b464b1 269 Pfam PF12697 Alpha/beta hydrolase family 30 260 5.4E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS15030 4914f7827efaab2b33a25445e3b464b1 269 Gene3D G3DSA:3.40.50.1820 8 269 2.1E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15030 4914f7827efaab2b33a25445e3b464b1 269 SUPERFAMILY SSF53474 9 268 4.55E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS17930 55f3394a494ec0c75e4c5942c41a0dfe 325 Gene3D G3DSA:3.40.190.10 124 233 7.8E-10 T 28-03-2018 AL504_RS17930 55f3394a494ec0c75e4c5942c41a0dfe 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 9.3E-90 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS17930 55f3394a494ec0c75e4c5942c41a0dfe 325 SUPERFAMILY SSF53850 112 286 7.33E-12 T 28-03-2018 AL504_RS17930 55f3394a494ec0c75e4c5942c41a0dfe 325 PIRSF PIRSF017082 1 325 1.3E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 Gene3D G3DSA:3.20.20.70 132 320 7.7E-24 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 Pfam PF00293 NUDIX domain 9 114 5.4E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 SUPERFAMILY SSF55811 6 116 1.34E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 PRINTS PR00502 NUDIX hydrolase family signature 35 49 9.3E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 PRINTS PR00502 NUDIX hydrolase family signature 49 64 9.3E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 SUPERFAMILY SSF51391 118 319 4.19E-43 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 Gene3D G3DSA:3.90.79.10 2 131 1.2E-29 T 28-03-2018 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 Pfam PF02581 Thiamine monophosphate synthase 147 318 1.1E-38 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS16105 26532b696746e7f56ee75e355075a47a 320 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL504_RS29855 da01017c232736ca9c6d1840ead60053 329 PIRSF PIRSF017082 1 328 2.6E-72 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29855 da01017c232736ca9c6d1840ead60053 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 325 8.9E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29855 da01017c232736ca9c6d1840ead60053 329 Gene3D G3DSA:3.40.190.10 135 301 1.0E-10 T 28-03-2018 AL504_RS29855 da01017c232736ca9c6d1840ead60053 329 SUPERFAMILY SSF53850 118 289 9.28E-14 T 28-03-2018 AL504_RS00615 1d8346ed49bf9dc4930218a80848fb17 432 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 17 135 4.5E-25 T 28-03-2018 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase AL504_RS00615 1d8346ed49bf9dc4930218a80848fb17 432 SUPERFAMILY SSF53474 414 426 1.84E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00615 1d8346ed49bf9dc4930218a80848fb17 432 SUPERFAMILY SSF53474 66 384 1.84E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00615 1d8346ed49bf9dc4930218a80848fb17 432 PIRSF PIRSF016521 3 432 5.5E-111 T 28-03-2018 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 AL504_RS00615 1d8346ed49bf9dc4930218a80848fb17 432 Gene3D G3DSA:3.40.50.1820 129 429 4.8E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS00615 1d8346ed49bf9dc4930218a80848fb17 432 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 201 429 6.6E-34 T 28-03-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal AL504_RS13295 ea99d067803b26259528404a19d23875 228 SUPERFAMILY SSF160443 138 221 6.15E-17 T 28-03-2018 IPR002625 Smr domain AL504_RS13295 ea99d067803b26259528404a19d23875 228 Pfam PF01713 Smr domain 140 221 2.2E-24 T 28-03-2018 IPR002625 Smr domain AL504_RS13295 ea99d067803b26259528404a19d23875 228 SMART SM00463 137 221 1.6E-14 T 28-03-2018 IPR002625 Smr domain AL504_RS05175 7eaf5b7f03906c2cc477a6f4e324b80c 229 SUPERFAMILY SSF53335 24 226 3.92E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS05175 7eaf5b7f03906c2cc477a6f4e324b80c 229 Gene3D G3DSA:3.40.50.150 18 228 1.0E-38 T 28-03-2018 AL504_RS05175 7eaf5b7f03906c2cc477a6f4e324b80c 229 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 19 229 34.635 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL504_RS05175 7eaf5b7f03906c2cc477a6f4e324b80c 229 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 150 165 - T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL504_RS05175 7eaf5b7f03906c2cc477a6f4e324b80c 229 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 20 226 1.3E-58 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL504_RS05175 7eaf5b7f03906c2cc477a6f4e324b80c 229 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 24 224 6.3E-56 T 28-03-2018 AL504_RS31315 3a220e031f0c9f26a47507a7a86eadd8 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 276 2.7E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS31315 3a220e031f0c9f26a47507a7a86eadd8 292 Gene3D G3DSA:1.10.3470.10 3 283 9.4E-43 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS25940 117f8c440bcdb21e2bb138cb0380107e 247 Pfam PF06299 Protein of unknown function (DUF1045) 60 220 7.4E-48 T 28-03-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25940 117f8c440bcdb21e2bb138cb0380107e 247 Gene3D G3DSA:3.90.1140.10 2 238 4.1E-20 T 28-03-2018 AL504_RS21305 020b364fcc68752725792e56a9148fd0 210 Pfam PF01810 LysE type translocator 15 204 3.6E-32 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS21305 020b364fcc68752725792e56a9148fd0 210 PIRSF PIRSF006324 1 207 9.5E-52 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS16250 0ae5fc6072d61f7647a714172851d8ab 120 SUPERFAMILY SSF54593 10 119 3.03E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS16250 0ae5fc6072d61f7647a714172851d8ab 120 Gene3D G3DSA:3.10.180.10 1 120 2.1E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS18680 98080370e0347f1519927d7c4e784309 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 372 5.1E-102 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS18680 98080370e0347f1519927d7c4e784309 392 PIRSF PIRSF005962 2 392 5.6E-124 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS18680 98080370e0347f1519927d7c4e784309 392 Gene3D G3DSA:3.40.630.10 4 237 1.2E-53 T 28-03-2018 AL504_RS18680 98080370e0347f1519927d7c4e784309 392 Gene3D G3DSA:3.40.630.10 238 392 2.5E-24 T 28-03-2018 AL504_RS18680 98080370e0347f1519927d7c4e784309 392 Pfam PF01546 Peptidase family M20/M25/M40 68 351 5.6E-35 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS18680 98080370e0347f1519927d7c4e784309 392 SUPERFAMILY SSF53187 295 390 1.83E-87 T 28-03-2018 AL504_RS18680 98080370e0347f1519927d7c4e784309 392 SUPERFAMILY SSF53187 6 193 1.83E-87 T 28-03-2018 AL504_RS18680 98080370e0347f1519927d7c4e784309 392 SUPERFAMILY SSF55031 181 286 1.44E-27 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS18680 98080370e0347f1519927d7c4e784309 392 Pfam PF07687 Peptidase dimerisation domain 181 279 8.9E-10 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 Pfam PF00005 ABC transporter 43 191 8.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 Gene3D G3DSA:3.10.580.10 287 389 9.4E-7 T 28-03-2018 AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 SMART SM00382 52 240 3.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 388 3.6E-122 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 SUPERFAMILY SSF52540 42 270 1.11E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 SUPERFAMILY SSF54631 276 393 5.12E-10 T 28-03-2018 AL504_RS26935 4c4d3bfa63aef9642dd1b15366db4e99 431 Gene3D G3DSA:3.40.50.300 1 286 6.9E-73 T 28-03-2018 AL504_RS17700 a77729180b25d419f376edc12dd4571a 327 PIRSF PIRSF034367 1 326 4.3E-200 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 AL504_RS17700 a77729180b25d419f376edc12dd4571a 327 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 5.1E-189 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 SUPERFAMILY SSF46626 230 304 1.89E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 SUPERFAMILY SSF46626 61 162 1.48E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 Gene3D G3DSA:1.10.760.10 72 190 2.1E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 83 156 1.8E-15 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 230 302 1.1E-15 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 PRINTS PR00607 Class IE cytochrome C signature 92 103 4.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 PRINTS PR00607 Class IE cytochrome C signature 103 113 4.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 PRINTS PR00607 Class IE cytochrome C signature 146 157 4.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 PRINTS PR00607 Class IE cytochrome C signature 131 143 4.2E-12 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL504_RS16755 b9533a01977fd4506f6a2145cb0eb6c0 307 Gene3D G3DSA:1.10.760.10 228 306 4.8E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS01475 67f2d4aa317c9261c7e0d367ae8a5c61 223 Pfam PF07007 Lysozyme inhibitor LprI 25 102 4.3E-8 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AL504_RS25965 a4cbc621fbdb27dd76e3f88e6a0a962f 371 PIRSF PIRSF007313 1 363 5.2E-154 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AL504_RS25965 a4cbc621fbdb27dd76e3f88e6a0a962f 371 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 353 6.2E-161 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AL504_RS02130 3018e37efd717616cc0b707e75a22f67 264 Pfam PF02596 Uncharacterised ArCR, COG2043 19 227 3.0E-37 T 28-03-2018 IPR003748 Protein of unknown function DUF169 AL504_RS04375 a30a19138a4214959fb53d530c265f47 739 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 6.3E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS04375 a30a19138a4214959fb53d530c265f47 739 SUPERFAMILY SSF56935 46 739 8.42E-106 T 28-03-2018 AL504_RS04375 a30a19138a4214959fb53d530c265f47 739 Gene3D G3DSA:2.170.130.10 45 181 5.9E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS04375 a30a19138a4214959fb53d530c265f47 739 Gene3D G3DSA:2.40.170.20 182 739 1.1E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS28300 19ddea2623992131344fe71271c8a27d 244 Pfam PF01144 Coenzyme A transferase 15 170 2.5E-11 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS28300 19ddea2623992131344fe71271c8a27d 244 SUPERFAMILY SSF100950 6 235 4.19E-49 T 28-03-2018 AL504_RS28300 19ddea2623992131344fe71271c8a27d 244 SMART SM00882 9 202 4.1E-5 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS28300 19ddea2623992131344fe71271c8a27d 244 Gene3D G3DSA:3.40.1080.10 2 239 1.7E-24 T 28-03-2018 AL504_RS30725 68e1cc1bc5c2edcdc874e9dcf25855b3 816 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 190 1.5E-5 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30725 68e1cc1bc5c2edcdc874e9dcf25855b3 816 SUPERFAMILY SSF56935 238 539 4.58E-50 T 28-03-2018 AL504_RS30725 68e1cc1bc5c2edcdc874e9dcf25855b3 816 SUPERFAMILY SSF56935 569 816 4.58E-50 T 28-03-2018 AL504_RS30725 68e1cc1bc5c2edcdc874e9dcf25855b3 816 SUPERFAMILY SSF56935 55 211 4.58E-50 T 28-03-2018 AL504_RS30725 68e1cc1bc5c2edcdc874e9dcf25855b3 816 Gene3D G3DSA:2.170.130.10 48 187 2.6E-7 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS30725 68e1cc1bc5c2edcdc874e9dcf25855b3 816 Gene3D G3DSA:2.40.170.20 188 816 1.5E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03730 731436f18a1c178a557a33d6a9982e81 121 Gene3D G3DSA:1.10.10.10 19 119 3.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03730 731436f18a1c178a557a33d6a9982e81 121 Pfam PF01638 HxlR-like helix-turn-helix 22 108 4.6E-22 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AL504_RS03730 731436f18a1c178a557a33d6a9982e81 121 SUPERFAMILY SSF46785 8 116 2.31E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11910 b2cb74d2548c819baf5af54a855d3e89 517 SUPERFAMILY SSF53850 33 514 1.5E-139 T 28-03-2018 AL504_RS11910 b2cb74d2548c819baf5af54a855d3e89 517 Gene3D G3DSA:3.10.105.10 278 490 1.2E-52 T 28-03-2018 AL504_RS11910 b2cb74d2548c819baf5af54a855d3e89 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 431 6.7E-96 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS11910 b2cb74d2548c819baf5af54a855d3e89 517 PIRSF PIRSF002741 4 513 9.0E-112 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS11910 b2cb74d2548c819baf5af54a855d3e89 517 Gene3D G3DSA:3.40.190.10 184 277 5.1E-26 T 28-03-2018 AL504_RS11910 b2cb74d2548c819baf5af54a855d3e89 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 78 100 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL504_RS11910 b2cb74d2548c819baf5af54a855d3e89 517 Gene3D G3DSA:3.90.76.10 39 183 1.7E-42 T 28-03-2018 AL504_RS02620 9c6fb3d5efafb258c938f22784c928f3 327 Gene3D G3DSA:3.40.190.10 126 237 7.8E-10 T 28-03-2018 AL504_RS02620 9c6fb3d5efafb258c938f22784c928f3 327 SUPERFAMILY SSF53850 115 290 2.99E-14 T 28-03-2018 AL504_RS02620 9c6fb3d5efafb258c938f22784c928f3 327 PIRSF PIRSF017082 1 326 1.4E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02620 9c6fb3d5efafb258c938f22784c928f3 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 315 1.2E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25810 2790bd35404ef38fd33427a32559e4d7 133 Gene3D G3DSA:3.10.180.10 1 133 1.3E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS25810 2790bd35404ef38fd33427a32559e4d7 133 SUPERFAMILY SSF54593 4 131 2.31E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS25810 2790bd35404ef38fd33427a32559e4d7 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 126 1.7E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS09210 069004e973d857b2a68cc2a604e80035 89 SUPERFAMILY SSF64307 12 88 4.71E-21 T 28-03-2018 IPR001455 TusA-like domain AL504_RS09210 069004e973d857b2a68cc2a604e80035 89 Gene3D G3DSA:3.30.110.40 2 89 3.4E-24 T 28-03-2018 IPR001455 TusA-like domain AL504_RS09210 069004e973d857b2a68cc2a604e80035 89 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 21 45 - T 28-03-2018 IPR001455 TusA-like domain AL504_RS09210 069004e973d857b2a68cc2a604e80035 89 Pfam PF01206 Sulfurtransferase TusA 21 82 6.4E-21 T 28-03-2018 IPR001455 TusA-like domain AL504_RS24190 ceade9d83cf5eeea53e8b08ea71dcf2a 222 Pfam PF08281 Sigma-70, region 4 134 184 1.4E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24190 ceade9d83cf5eeea53e8b08ea71dcf2a 222 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 187 3.7E-20 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24190 ceade9d83cf5eeea53e8b08ea71dcf2a 222 SUPERFAMILY SSF88946 21 92 1.88E-5 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24190 ceade9d83cf5eeea53e8b08ea71dcf2a 222 Gene3D G3DSA:1.10.1740.10 19 99 2.8E-7 T 28-03-2018 AL504_RS24190 ceade9d83cf5eeea53e8b08ea71dcf2a 222 SUPERFAMILY SSF88659 115 189 1.16E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24190 ceade9d83cf5eeea53e8b08ea71dcf2a 222 Pfam PF04542 Sigma-70 region 2 35 95 3.2E-6 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24190 ceade9d83cf5eeea53e8b08ea71dcf2a 222 Gene3D G3DSA:1.10.10.10 113 197 9.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS09005 a51c816aa69ceba515f4533ce26e2ed1 340 Pfam PF03837 RecT family 62 250 1.1E-47 T 28-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 AL504_RS09005 a51c816aa69ceba515f4533ce26e2ed1 340 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 13 246 6.7E-66 T 28-03-2018 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 SUPERFAMILY SSF50156 84 182 5.39E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 Pfam PF13180 PDZ domain 215 283 7.3E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 Pfam PF13180 PDZ domain 124 176 5.7E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 SMART SM00228 208 275 0.025 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 SMART SM00228 112 184 6.0E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 Gene3D G3DSA:2.30.42.10 125 206 6.4E-12 T 28-03-2018 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 Gene3D G3DSA:2.30.42.10 216 302 5.0E-15 T 28-03-2018 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 SUPERFAMILY SSF50156 218 284 8.68E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 442 7.5E-111 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AL504_RS06165 75bb093033725a59ffb231d3917f81fd 443 Pfam PF02163 Peptidase family M50 7 428 4.7E-75 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 AL504_RS00055 5cd7e3da22d687efb8fffda8b7b77fdd 109 Gene3D G3DSA:1.10.1220.10 22 108 5.4E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS25855 9af5cd5452f025b76e7cc3475ddd43fb 374 Pfam PF04914 DltD protein 220 372 1.2E-26 T 28-03-2018 IPR006998 DltD AL504_RS25855 9af5cd5452f025b76e7cc3475ddd43fb 374 Pfam PF04914 DltD protein 65 180 3.5E-18 T 28-03-2018 IPR006998 DltD AL504_RS25855 9af5cd5452f025b76e7cc3475ddd43fb 374 Gene3D G3DSA:3.40.50.1110 45 374 2.3E-5 T 28-03-2018 AL504_RS18230 1089654501fd0ff19ae5937821a9c372 195 SUPERFAMILY SSF51306 70 190 2.41E-19 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS18230 1089654501fd0ff19ae5937821a9c372 195 Gene3D G3DSA:2.10.109.10 40 195 7.4E-12 T 28-03-2018 AL504_RS18230 1089654501fd0ff19ae5937821a9c372 195 Pfam PF10502 Signal peptidase, peptidase S26 46 191 3.9E-54 T 28-03-2018 IPR019533 Peptidase S26 AL504_RS12675 d7feae36aecd96bba8aefac67522b993 366 SUPERFAMILY SSF111369 47 273 3.4E-16 T 28-03-2018 AL504_RS12675 d7feae36aecd96bba8aefac67522b993 366 Gene3D G3DSA:3.90.1170.30 7 97 5.2E-7 T 28-03-2018 AL504_RS12675 d7feae36aecd96bba8aefac67522b993 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 271 1.4E-22 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS12675 d7feae36aecd96bba8aefac67522b993 366 Gene3D G3DSA:1.20.1600.10 98 335 2.4E-15 T 28-03-2018 AL504_RS12675 d7feae36aecd96bba8aefac67522b993 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 355 6.8E-64 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS03345 fea95eb6956af1223c1da52103922377 742 Gene3D G3DSA:3.40.718.10 59 371 5.6E-44 T 28-03-2018 AL504_RS03345 fea95eb6956af1223c1da52103922377 742 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL504_RS03345 fea95eb6956af1223c1da52103922377 742 SUPERFAMILY SSF53659 4 740 0.0 T 28-03-2018 AL504_RS03345 fea95eb6956af1223c1da52103922377 742 Gene3D G3DSA:3.40.718.10 437 701 6.9E-38 T 28-03-2018 AL504_RS03345 fea95eb6956af1223c1da52103922377 742 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 4 740 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL504_RS03345 fea95eb6956af1223c1da52103922377 742 PIRSF PIRSF009407 1 742 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL504_RS23175 38acf18ba2b151c4ca3a91606f5de4d3 263 SUPERFAMILY SSF48317 19 232 8.24E-15 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS23175 38acf18ba2b151c4ca3a91606f5de4d3 263 Pfam PF01569 PAP2 superfamily 105 230 7.3E-15 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS23175 38acf18ba2b151c4ca3a91606f5de4d3 263 Gene3D G3DSA:1.20.144.10 21 234 4.9E-9 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS06785 9196a611a342b335828082fd2766e475 726 Pfam PF04185 Phosphoesterase family 54 456 1.1E-110 T 28-03-2018 IPR007312 Phosphoesterase GO:0016788 AL504_RS06785 9196a611a342b335828082fd2766e475 726 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 12 725 5.3E-289 T 28-03-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS06785 9196a611a342b335828082fd2766e475 726 Pfam PF05506 Domain of unknown function (DUF756) 629 711 4.2E-20 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS06785 9196a611a342b335828082fd2766e475 726 Pfam PF05506 Domain of unknown function (DUF756) 530 617 7.4E-26 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS06785 9196a611a342b335828082fd2766e475 726 Gene3D G3DSA:3.40.720.10 132 460 5.5E-18 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS12265 04885769b4ed07a4f3c95119b77072f2 277 Gene3D G3DSA:3.40.390.10 86 271 2.4E-22 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL504_RS12265 04885769b4ed07a4f3c95119b77072f2 277 Pfam PF06167 Glucose-regulated metallo-peptidase M90 17 269 1.5E-76 T 28-03-2018 IPR010384 MtfA family AL504_RS12265 04885769b4ed07a4f3c95119b77072f2 277 SUPERFAMILY SSF55486 43 196 4.1E-37 T 28-03-2018 AL504_RS12265 04885769b4ed07a4f3c95119b77072f2 277 SUPERFAMILY SSF55486 228 271 4.1E-37 T 28-03-2018 AL504_RS31210 a3299a4357b98c0050d48a4e755a596a 251 Pfam PF01435 Peptidase family M48 73 246 1.5E-25 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL504_RS31210 a3299a4357b98c0050d48a4e755a596a 251 Gene3D G3DSA:3.30.2010.10 37 149 5.4E-18 T 28-03-2018 AL504_RS15215 b4f7bde241a2d76e3418adda812720d8 259 SUPERFAMILY SSF53335 70 222 2.81E-15 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS15215 b4f7bde241a2d76e3418adda812720d8 259 Gene3D G3DSA:3.40.50.150 47 223 2.6E-12 T 28-03-2018 AL504_RS15215 b4f7bde241a2d76e3418adda812720d8 259 Pfam PF08241 Methyltransferase domain 80 131 1.1E-8 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL504_RS03335 adaa0e1ee4e67245f3de8b567c82f8b8 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 250 8.5E-75 T 28-03-2018 IPR005226 UPF0014 family AL504_RS03335 adaa0e1ee4e67245f3de8b567c82f8b8 266 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 8 251 4.7E-53 T 28-03-2018 IPR005226 UPF0014 family AL504_RS28070 27de1f057ee4496f2fd30f97c21f7c38 527 Pfam PF03741 Integral membrane protein TerC family 14 204 1.6E-48 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL504_RS28070 27de1f057ee4496f2fd30f97c21f7c38 527 SUPERFAMILY SSF54631 285 419 4.8E-21 T 28-03-2018 AL504_RS28070 27de1f057ee4496f2fd30f97c21f7c38 527 Gene3D G3DSA:3.10.580.10 279 424 6.9E-21 T 28-03-2018 AL504_RS28070 27de1f057ee4496f2fd30f97c21f7c38 527 Gene3D G3DSA:3.30.465.10 425 514 2.2E-21 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS28070 27de1f057ee4496f2fd30f97c21f7c38 527 SUPERFAMILY SSF56176 426 517 9.82E-21 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS28070 27de1f057ee4496f2fd30f97c21f7c38 527 Pfam PF03471 Transporter associated domain 432 513 4.5E-22 T 28-03-2018 IPR005170 Transporter-associated domain AL504_RS28070 27de1f057ee4496f2fd30f97c21f7c38 527 SMART SM01091 429 514 2.0E-22 T 28-03-2018 IPR005170 Transporter-associated domain AL504_RS16935 482b81ea72dca3a34ab23b1b83f8ca5e 156 SUPERFAMILY SSF81573 67 121 4.18E-7 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AL504_RS16935 482b81ea72dca3a34ab23b1b83f8ca5e 156 Gene3D G3DSA:1.20.5.620 7 122 5.1E-5 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AL504_RS16935 482b81ea72dca3a34ab23b1b83f8ca5e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.3E-27 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL504_RS16935 482b81ea72dca3a34ab23b1b83f8ca5e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.435 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL504_RS16935 482b81ea72dca3a34ab23b1b83f8ca5e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 1.4E-38 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 Gene3D G3DSA:1.10.860.10 5 157 1.3E-45 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 Pfam PF00772 DnaB-like helicase N terminal domain 15 116 4.2E-32 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 Pfam PF03796 DnaB-like helicase C terminal domain 195 450 7.3E-113 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 Gene3D G3DSA:3.40.50.300 175 458 3.7E-66 T 28-03-2018 AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 SUPERFAMILY SSF48024 13 124 1.83E-35 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 SUPERFAMILY SSF52540 193 444 5.56E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 SMART SM00382 212 410 7.8E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS10865 bb58a7d6dff868188247887354c2cd48 460 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 15 451 7.7E-174 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AL504_RS25685 5fd3e063540325e27862f33f22c7b20f 289 Gene3D G3DSA:1.10.3720.10 37 289 8.4E-32 T 28-03-2018 AL504_RS25685 5fd3e063540325e27862f33f22c7b20f 289 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 81 277 7.2E-73 T 28-03-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 AL504_RS25685 5fd3e063540325e27862f33f22c7b20f 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 283 3.0E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS25685 5fd3e063540325e27862f33f22c7b20f 289 SUPERFAMILY SSF161098 91 276 1.7E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS25330 8026655d89df1a0c97fef9b56901d008 520 Pfam PF08811 Protein of unknown function (DUF1800) 26 517 3.9E-85 T 28-03-2018 IPR014917 Protein of unknown function DUF1800 AL504_RS17685 f3e5c99d38bab037c5ebe37cb1ec0cd2 493 Gene3D G3DSA:3.20.20.220 2 299 1.3E-29 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS17685 f3e5c99d38bab037c5ebe37cb1ec0cd2 493 Pfam PF02219 Methylenetetrahydrofolate reductase 75 228 1.2E-8 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL504_RS17685 f3e5c99d38bab037c5ebe37cb1ec0cd2 493 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 378 455 1.7E-18 T 28-03-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal AL504_RS17685 f3e5c99d38bab037c5ebe37cb1ec0cd2 493 SUPERFAMILY SSF51730 3 282 1.37E-31 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS29880 d8ecbbd8658dff1c4468c226c8557522 169 Gene3D G3DSA:3.40.630.30 1 151 4.6E-24 T 28-03-2018 AL504_RS29880 d8ecbbd8658dff1c4468c226c8557522 169 Pfam PF13527 Acetyltransferase (GNAT) domain 4 127 4.1E-14 T 28-03-2018 AL504_RS29880 d8ecbbd8658dff1c4468c226c8557522 169 SUPERFAMILY SSF55729 1 144 2.23E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS06835 c1799eef27d1be217e8b4806c72d4a60 195 SUPERFAMILY SSF103054 108 170 2.48E-5 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AL504_RS06835 c1799eef27d1be217e8b4806c72d4a60 195 Pfam PF04612 Type II secretion system (T2SS), protein M 23 184 2.8E-25 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL504_RS06835 c1799eef27d1be217e8b4806c72d4a60 195 Gene3D G3DSA:3.30.1360.100 105 187 4.0E-14 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AL504_RS09510 12e5ffc4445aaf9ce799b59c13179993 487 Pfam PF10150 Ribonuclease E/G family 120 391 2.7E-101 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL504_RS09510 12e5ffc4445aaf9ce799b59c13179993 487 Gene3D G3DSA:2.40.50.140 33 123 9.6E-29 T 28-03-2018 AL504_RS09510 12e5ffc4445aaf9ce799b59c13179993 487 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 1.2E-152 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL504_RS09510 12e5ffc4445aaf9ce799b59c13179993 487 SMART SM00316 37 118 1.5E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS09510 12e5ffc4445aaf9ce799b59c13179993 487 SUPERFAMILY SSF50249 39 124 2.82E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS04635 55e227ef677e479f27488e092e996cd9 367 Gene3D G3DSA:3.40.710.10 163 360 3.3E-21 T 28-03-2018 AL504_RS04635 55e227ef677e479f27488e092e996cd9 367 Pfam PF00144 Beta-lactamase 44 348 1.2E-32 T 28-03-2018 IPR001466 Beta-lactamase-related AL504_RS04635 55e227ef677e479f27488e092e996cd9 367 SUPERFAMILY SSF56601 34 348 4.06E-44 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS04635 55e227ef677e479f27488e092e996cd9 367 Gene3D G3DSA:3.40.710.10 27 155 2.8E-23 T 28-03-2018 AL504_RS12450 75a03f5237dfee56c27911a62560fce7 182 Gene3D G3DSA:3.40.30.10 1 167 1.1E-29 T 28-03-2018 AL504_RS12450 75a03f5237dfee56c27911a62560fce7 182 PIRSF PIRSF000239 1 182 3.4E-38 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS12450 75a03f5237dfee56c27911a62560fce7 182 SUPERFAMILY SSF52833 4 181 1.83E-43 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS12450 75a03f5237dfee56c27911a62560fce7 182 Pfam PF00578 AhpC/TSA family 6 143 4.9E-24 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS10925 42d62e06e9605806d6561ae80d708448 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 318 1.6E-82 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10925 42d62e06e9605806d6561ae80d708448 322 SUPERFAMILY SSF53850 114 284 2.78E-14 T 28-03-2018 AL504_RS10925 42d62e06e9605806d6561ae80d708448 322 PIRSF PIRSF017082 4 322 4.1E-72 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10925 42d62e06e9605806d6561ae80d708448 322 Gene3D G3DSA:3.40.190.10 130 292 1.6E-10 T 28-03-2018 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 SUPERFAMILY SSF51905 26 352 3.17E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 408 513 4.5E-16 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 380 390 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 344 350 3.5E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 55 67 3.5E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 26 38 3.5E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 100 112 3.5E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 49 3.5E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 375 387 3.5E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 Pfam PF01266 FAD dependent oxidoreductase 27 386 4.8E-57 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 Gene3D G3DSA:3.50.50.60 7 94 2.4E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 Gene3D G3DSA:3.30.9.10 104 211 3.3E-14 T 28-03-2018 AL504_RS05475 331f7d39f636e9b3d931a7525db950aa 532 Gene3D G3DSA:3.30.9.10 212 351 1.2E-44 T 28-03-2018 AL504_RS27225 a5e427bf6449d2614d347ca8b55588a3 242 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 11 186 1.5E-80 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL504_RS27225 a5e427bf6449d2614d347ca8b55588a3 242 Gene3D G3DSA:1.10.760.10 42 216 6.9E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27225 a5e427bf6449d2614d347ca8b55588a3 242 SUPERFAMILY SSF46626 21 202 3.92E-28 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27225 a5e427bf6449d2614d347ca8b55588a3 242 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 11 190 3.0E-77 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL504_RS07085 15798bb3c437d3884e54188f6661e17d 444 Pfam PF07690 Major Facilitator Superfamily 19 394 3.9E-50 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS07085 15798bb3c437d3884e54188f6661e17d 444 SUPERFAMILY SSF103473 6 429 2.49E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS07085 15798bb3c437d3884e54188f6661e17d 444 Gene3D G3DSA:1.20.1250.20 231 440 3.0E-27 T 28-03-2018 AL504_RS07085 15798bb3c437d3884e54188f6661e17d 444 PIRSF PIRSF002808 1 440 2.5E-33 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL504_RS07085 15798bb3c437d3884e54188f6661e17d 444 Gene3D G3DSA:1.20.1250.20 2 217 1.8E-35 T 28-03-2018 AL504_RS02465 6eeb3589988fda0695d167b3b1f83799 342 SUPERFAMILY SSF53850 29 254 2.35E-41 T 28-03-2018 AL504_RS02465 6eeb3589988fda0695d167b3b1f83799 342 SMART SM00062 30 251 0.003 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS02465 6eeb3589988fda0695d167b3b1f83799 342 Pfam PF09084 NMT1/THI5 like 56 252 7.0E-18 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS02465 6eeb3589988fda0695d167b3b1f83799 342 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 32 338 2.1E-136 T 28-03-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 AL504_RS02465 6eeb3589988fda0695d167b3b1f83799 342 Gene3D G3DSA:3.40.190.10 135 341 7.2E-32 T 28-03-2018 AL504_RS02465 6eeb3589988fda0695d167b3b1f83799 342 Gene3D G3DSA:3.40.190.10 25 134 5.9E-11 T 28-03-2018 AL504_RS15515 253789349cc4f725c3ac5f9daac5d08e 419 Pfam PF04285 Protein of unknown function (DUF444) 4 417 4.5E-167 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 AL504_RS15515 253789349cc4f725c3ac5f9daac5d08e 419 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 419 34.635 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 AL504_RS15515 253789349cc4f725c3ac5f9daac5d08e 419 SUPERFAMILY SSF53300 248 356 1.62E-6 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 46 61 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 5.6E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 PRINTS PR00173 Glutamate-aspartate symporter signature 84 109 5.6E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 5.6E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 5.6E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 5.6E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 12 438 38.465 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 Pfam PF00375 Sodium:dicarboxylate symporter family 19 411 1.8E-108 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 Gene3D G3DSA:1.10.3860.10 10 418 2.0E-116 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS09470 53cf870b054f12a335ae0095dedd115b 444 SUPERFAMILY SSF118215 19 412 1.18E-118 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 SUPERFAMILY SSF56322 14 495 3.66E-151 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 PRINTS PR00095 Anthranilate synthase component I signature 429 443 2.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 PRINTS PR00095 Anthranilate synthase component I signature 444 458 2.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 PRINTS PR00095 Anthranilate synthase component I signature 335 348 2.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 PRINTS PR00095 Anthranilate synthase component I signature 349 362 2.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 495 6.2E-157 T 28-03-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 Gene3D G3DSA:3.60.120.10 13 497 9.2E-160 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 177 1.4E-25 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL504_RS17125 6ad80ca5fc90db2ab06a7d6d595c7e31 506 Pfam PF00425 chorismate binding enzyme 226 487 1.7E-93 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL504_RS17295 a3af467f1432a965a3ff4511d4913d40 269 SMART SM00382 46 235 7.9E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17295 a3af467f1432a965a3ff4511d4913d40 269 Pfam PF00005 ABC transporter 38 186 2.0E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17295 a3af467f1432a965a3ff4511d4913d40 269 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS17295 a3af467f1432a965a3ff4511d4913d40 269 Gene3D G3DSA:3.40.50.300 14 267 6.6E-74 T 28-03-2018 AL504_RS17295 a3af467f1432a965a3ff4511d4913d40 269 SUPERFAMILY SSF52540 17 242 1.74E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23925 90ac47a6baaf472af503e050968f84a4 302 Gene3D G3DSA:1.10.10.10 5 93 2.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23925 90ac47a6baaf472af503e050968f84a4 302 SUPERFAMILY SSF53850 91 294 7.6E-33 T 28-03-2018 AL504_RS23925 90ac47a6baaf472af503e050968f84a4 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS23925 90ac47a6baaf472af503e050968f84a4 302 SUPERFAMILY SSF46785 5 114 9.53E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23925 90ac47a6baaf472af503e050968f84a4 302 Pfam PF03466 LysR substrate binding domain 91 290 2.5E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS23925 90ac47a6baaf472af503e050968f84a4 302 Gene3D G3DSA:3.40.190.10 179 264 4.1E-14 T 28-03-2018 AL504_RS23925 90ac47a6baaf472af503e050968f84a4 302 Gene3D G3DSA:3.40.190.10 94 178 1.5E-22 T 28-03-2018 AL504_RS16780 e47f59701efcd2cbaafc05d8dfad107d 323 SUPERFAMILY SSF51412 13 310 7.69E-58 T 28-03-2018 AL504_RS16780 e47f59701efcd2cbaafc05d8dfad107d 323 Gene3D G3DSA:3.20.20.70 5 323 2.2E-36 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS16780 e47f59701efcd2cbaafc05d8dfad107d 323 Pfam PF03060 Nitronate monooxygenase 85 250 2.1E-21 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS04400 ba301ca02f8e3c8528865e3bac3e16c3 106 Gene3D G3DSA:1.10.4000.10 5 79 1.3E-19 T 28-03-2018 AL504_RS04400 ba301ca02f8e3c8528865e3bac3e16c3 106 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 85 6.2E-14 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL504_RS04400 ba301ca02f8e3c8528865e3bac3e16c3 106 SUPERFAMILY SSF63592 5 83 2.48E-14 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL504_RS04400 ba301ca02f8e3c8528865e3bac3e16c3 106 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 11 81 1.0E-7 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 SUPERFAMILY SSF46689 342 390 1.0E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 Gene3D G3DSA:1.10.10.60 344 391 1.8E-15 T 28-03-2018 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 Pfam PF12833 Helix-turn-helix domain 311 389 2.7E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 SUPERFAMILY SSF46689 288 336 2.87E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 357 372 1.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 372 388 1.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 Gene3D G3DSA:1.10.10.60 286 343 4.4E-10 T 28-03-2018 AL504_RS24255 4440c59019962e968bdb06c910e7c021 391 SMART SM00342 305 388 8.9E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07190 4d571f05018367a7cf6d43307bba1314 147 Pfam PF16310 Domian of unknown function (DUF4952) 25 97 3.2E-22 T 28-03-2018 IPR032537 Protein of unknown function DUF4952 AL504_RS19815 e4d34e96ffca82d49693a749fab7a571 254 Gene3D G3DSA:3.40.50.2000 28 130 0.0051 T 28-03-2018 AL504_RS19815 e4d34e96ffca82d49693a749fab7a571 254 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 231 3.3E-57 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL504_RS19815 e4d34e96ffca82d49693a749fab7a571 254 Gene3D G3DSA:3.40.190.10 131 250 0.07 T 28-03-2018 AL504_RS19815 e4d34e96ffca82d49693a749fab7a571 254 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 234 1.4E-41 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL504_RS18050 aecc53d2787445af1801435e29f7f42e 135 Pfam PF13560 Helix-turn-helix domain 3 61 1.0E-7 T 28-03-2018 AL504_RS18050 aecc53d2787445af1801435e29f7f42e 135 SMART SM00530 6 64 5.7E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS18050 aecc53d2787445af1801435e29f7f42e 135 Gene3D G3DSA:1.10.260.40 1 72 5.2E-11 T 28-03-2018 AL504_RS18050 aecc53d2787445af1801435e29f7f42e 135 SUPERFAMILY SSF47413 2 67 2.02E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS12600 dc14362319b142feb8a05ca32df6caac 264 Gene3D G3DSA:3.60.21.10 2 259 2.6E-37 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS12600 dc14362319b142feb8a05ca32df6caac 264 Pfam PF00149 Calcineurin-like phosphoesterase 3 190 7.3E-16 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS12600 dc14362319b142feb8a05ca32df6caac 264 SUPERFAMILY SSF56300 1 235 5.43E-52 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS27500 7785bf69c101c3582e4e2920a772bf61 423 Gene3D G3DSA:1.20.1250.20 221 411 5.2E-25 T 28-03-2018 AL504_RS27500 7785bf69c101c3582e4e2920a772bf61 423 SUPERFAMILY SSF103473 9 410 1.83E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS27500 7785bf69c101c3582e4e2920a772bf61 423 Gene3D G3DSA:1.20.1250.20 7 201 4.3E-17 T 28-03-2018 AL504_RS27500 7785bf69c101c3582e4e2920a772bf61 423 Pfam PF07690 Major Facilitator Superfamily 23 317 7.5E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS11955 7440b0163f4b7cb30d1980f4fadf22d6 282 Gene3D G3DSA:3.40.50.720 2 280 2.2E-34 T 28-03-2018 AL504_RS11955 7440b0163f4b7cb30d1980f4fadf22d6 282 SUPERFAMILY SSF51735 9 254 7.46E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS11955 7440b0163f4b7cb30d1980f4fadf22d6 282 Pfam PF13460 NAD(P)H-binding 11 200 8.3E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07720 9b142e344299b5271c8c55fea87e1a18 209 Gene3D G3DSA:3.40.50.150 6 209 3.8E-32 T 28-03-2018 AL504_RS07720 9b142e344299b5271c8c55fea87e1a18 209 SUPERFAMILY SSF53335 18 193 4.37E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS07720 9b142e344299b5271c8c55fea87e1a18 209 Pfam PF13649 Methyltransferase domain 54 143 1.3E-15 T 28-03-2018 AL504_RS10015 fbd3b6c1400b1c5ce26ca09732c0a5f5 243 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 239 27.319 T 28-03-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AL504_RS10015 fbd3b6c1400b1c5ce26ca09732c0a5f5 243 Gene3D G3DSA:3.30.200.20 38 126 2.3E-7 T 28-03-2018 AL504_RS10015 fbd3b6c1400b1c5ce26ca09732c0a5f5 243 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 44 225 4.1E-46 T 28-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AL504_RS10015 fbd3b6c1400b1c5ce26ca09732c0a5f5 243 SUPERFAMILY SSF56112 44 194 3.37E-20 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS10015 fbd3b6c1400b1c5ce26ca09732c0a5f5 243 Gene3D G3DSA:1.10.510.10 127 212 2.1E-8 T 28-03-2018 AL504_RS07100 0be9f12b148cbfce05303d25de1e818d 127 Pfam PF13788 Domain of unknown function (DUF4180) 13 122 4.5E-39 T 28-03-2018 IPR025438 Domain of unknown function DUF4180 AL504_RS00515 bcd34cd91cf155270b6593aa790771cc 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 422 3.0E-95 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS00515 bcd34cd91cf155270b6593aa790771cc 432 PIRSF PIRSF006066 1 432 1.9E-118 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS00515 bcd34cd91cf155270b6593aa790771cc 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 427 3.9E-103 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 SMART SM00244 22 180 3.6E-57 T 28-03-2018 IPR001107 Band 7 domain AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 SUPERFAMILY SSF117892 53 187 3.4E-41 T 28-03-2018 IPR001107 Band 7 domain AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 Pfam PF16200 C-terminal region of band_7 246 305 2.1E-28 T 28-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 Pfam PF01145 SPFH domain / Band 7 family 26 195 9.4E-31 T 28-03-2018 IPR001107 Band 7 domain AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 PRINTS PR00721 Stomatin signature 156 174 5.0E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 PRINTS PR00721 Stomatin signature 77 98 5.0E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 PRINTS PR00721 Stomatin signature 112 129 5.0E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 PRINTS PR00721 Stomatin signature 132 155 5.0E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 PRINTS PR00721 Stomatin signature 175 196 5.0E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL504_RS06070 6282e1adcebe6e8aec322044ad46ca63 308 PRINTS PR00721 Stomatin signature 29 51 5.0E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL504_RS29430 71f29dbf87fb2c812ed155f4e63e29d5 231 Pfam PF13410 Glutathione S-transferase, C-terminal domain 152 215 1.5E-6 T 28-03-2018 AL504_RS29430 71f29dbf87fb2c812ed155f4e63e29d5 231 SUPERFAMILY SSF47616 146 218 1.81E-12 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS29430 71f29dbf87fb2c812ed155f4e63e29d5 231 SUPERFAMILY SSF47616 94 119 1.81E-12 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS29430 71f29dbf87fb2c812ed155f4e63e29d5 231 Gene3D G3DSA:1.20.1050.10 110 222 2.9E-35 T 28-03-2018 AL504_RS29430 71f29dbf87fb2c812ed155f4e63e29d5 231 Pfam PF13417 Glutathione S-transferase, N-terminal domain 17 86 1.4E-12 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS29430 71f29dbf87fb2c812ed155f4e63e29d5 231 SUPERFAMILY SSF52833 16 110 8.04E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS29430 71f29dbf87fb2c812ed155f4e63e29d5 231 Gene3D G3DSA:3.40.30.10 4 109 1.3E-18 T 28-03-2018 AL504_RS06175 ee9260c86bfc8a815122700c1e979da4 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 242 268 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AL504_RS06175 ee9260c86bfc8a815122700c1e979da4 285 Pfam PF01148 Cytidylyltransferase family 4 280 7.6E-52 T 28-03-2018 AL504_RS23215 d0fdab07970efa2f6590516068ee2dcd 304 Gene3D G3DSA:3.40.1130.10 55 296 7.6E-18 T 28-03-2018 AL504_RS23215 d0fdab07970efa2f6590516068ee2dcd 304 SUPERFAMILY SSF69593 59 292 1.44E-28 T 28-03-2018 AL504_RS23215 d0fdab07970efa2f6590516068ee2dcd 304 Pfam PF01553 Acyltransferase 87 230 1.3E-12 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS23215 d0fdab07970efa2f6590516068ee2dcd 304 SMART SM00563 89 231 7.4E-17 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS16210 87b745120fac2d7276fcb7f7ebe8f7a8 350 Pfam PF07883 Cupin domain 94 165 4.9E-24 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS16210 87b745120fac2d7276fcb7f7ebe8f7a8 350 SUPERFAMILY SSF51182 11 348 3.82E-115 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS16210 87b745120fac2d7276fcb7f7ebe8f7a8 350 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 10 348 1.1E-173 T 28-03-2018 IPR011960 Gentisate 1,2-dioxygenase AL504_RS16210 87b745120fac2d7276fcb7f7ebe8f7a8 350 Gene3D G3DSA:2.60.120.10 48 349 2.0E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS08795 90e848c69773687c2d35be81143a55eb 483 Pfam PF04865 Baseplate J-like protein 81 186 1.6E-5 T 28-03-2018 IPR006949 Baseplate protein J-like AL504_RS19950 9931a5c3e661e33993935493d5de31be 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 9.3E-57 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AL504_RS19950 9931a5c3e661e33993935493d5de31be 122 Gene3D G3DSA:2.40.150.20 1 122 1.0E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL504_RS19950 9931a5c3e661e33993935493d5de31be 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 8.3E-54 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL504_RS19950 9931a5c3e661e33993935493d5de31be 122 SUPERFAMILY SSF50193 1 122 9.55E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL504_RS19950 9931a5c3e661e33993935493d5de31be 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.044 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL504_RS19950 9931a5c3e661e33993935493d5de31be 122 SMART SM01374 1 122 4.8E-83 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL504_RS19950 9931a5c3e661e33993935493d5de31be 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL504_RS24655 ea8a81289355422a53f1e676be774bd1 442 Pfam PF00202 Aminotransferase class-III 22 427 2.2E-79 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS24655 ea8a81289355422a53f1e676be774bd1 442 Gene3D G3DSA:3.90.1150.10 305 431 5.9E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS24655 ea8a81289355422a53f1e676be774bd1 442 Gene3D G3DSA:3.40.640.10 56 304 1.4E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS24655 ea8a81289355422a53f1e676be774bd1 442 SUPERFAMILY SSF53383 13 429 3.03E-109 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS24655 ea8a81289355422a53f1e676be774bd1 442 PIRSF PIRSF000521 122 430 9.8E-26 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS24655 ea8a81289355422a53f1e676be774bd1 442 PIRSF PIRSF000521 13 127 2.0E-7 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS24655 ea8a81289355422a53f1e676be774bd1 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS27390 7f187142c19518a0d90007a238f619ca 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 444 3.3E-79 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS27390 7f187142c19518a0d90007a238f619ca 531 Gene3D G3DSA:3.90.76.10 55 154 5.6E-27 T 28-03-2018 AL504_RS27390 7f187142c19518a0d90007a238f619ca 531 SUPERFAMILY SSF53850 31 511 2.53E-119 T 28-03-2018 AL504_RS27390 7f187142c19518a0d90007a238f619ca 531 PIRSF PIRSF002741 22 517 1.1E-89 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS27390 7f187142c19518a0d90007a238f619ca 531 Gene3D G3DSA:3.10.105.10 302 501 6.1E-41 T 28-03-2018 AL504_RS27390 7f187142c19518a0d90007a238f619ca 531 Gene3D G3DSA:3.40.190.10 155 301 5.5E-38 T 28-03-2018 AL504_RS07135 9dd5bb0b90b0dd5eb83528b8d0d155e4 98 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 12 90 3.4E-24 T 28-03-2018 AL504_RS07135 9dd5bb0b90b0dd5eb83528b8d0d155e4 98 SUPERFAMILY SSF54292 14 90 1.44E-16 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS07135 9dd5bb0b90b0dd5eb83528b8d0d155e4 98 Gene3D G3DSA:3.10.20.30 10 87 6.8E-9 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS11370 c148f5f776a716a57c6f57d8a71e2558 326 PIRSF PIRSF017082 1 325 6.2E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11370 c148f5f776a716a57c6f57d8a71e2558 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 322 2.3E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS11370 c148f5f776a716a57c6f57d8a71e2558 326 SUPERFAMILY SSF53850 111 286 2.02E-14 T 28-03-2018 AL504_RS11370 c148f5f776a716a57c6f57d8a71e2558 326 Gene3D G3DSA:3.40.190.10 130 297 1.2E-10 T 28-03-2018 AL504_RS22255 81c80e46988bff6608a5939e7fadc55e 107 Pfam PF12779 YXWGXW repeat (2 copies) 52 76 1.9E-8 T 28-03-2018 IPR024447 YXWGXW repeat AL504_RS14475 318c9f9072a012809cf280d63d8cb913 331 Pfam PF04773 FecR protein 114 205 1.3E-9 T 28-03-2018 IPR006860 FecR protein AL504_RS14475 318c9f9072a012809cf280d63d8cb913 331 PIRSF PIRSF018266 3 323 3.3E-60 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS14475 318c9f9072a012809cf280d63d8cb913 331 Pfam PF16220 Domain of unknown function (DUF4880) 14 56 3.6E-10 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 SUPERFAMILY SSF46689 3 65 8.98E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 PRINTS PR00400 Tetracycline repressor protein signature 75 94 9.1E-27 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 PRINTS PR00400 Tetracycline repressor protein signature 95 118 9.1E-27 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 PRINTS PR00400 Tetracycline repressor protein signature 130 149 9.1E-27 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 PRINTS PR00400 Tetracycline repressor protein signature 21 44 9.1E-27 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 69 190 6.1E-21 T 28-03-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 Gene3D G3DSA:1.10.357.10 62 194 1.7E-18 T 28-03-2018 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 3.0E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 Gene3D G3DSA:1.10.10.60 2 61 4.4E-15 T 28-03-2018 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 SUPERFAMILY SSF48498 69 193 9.9E-29 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.0E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS01345 d9b4cb35c52bb3ffb619b1482f662ce1 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.0E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12205 79517e729d682b428d4ac70f048830a2 322 SUPERFAMILY SSF56524 69 318 8.11E-89 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS12205 79517e729d682b428d4ac70f048830a2 322 Pfam PF00174 Oxidoreductase molybdopterin binding domain 101 256 2.9E-28 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS12205 79517e729d682b428d4ac70f048830a2 322 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 322 54.431 T 28-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AL504_RS12205 79517e729d682b428d4ac70f048830a2 322 Gene3D G3DSA:3.90.420.10 59 322 2.2E-56 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL504_RS17025 fb2645376591d4b807f071de0ba40a38 229 Gene3D G3DSA:3.40.50.300 1 224 1.8E-54 T 28-03-2018 AL504_RS17025 fb2645376591d4b807f071de0ba40a38 229 Pfam PF00005 ABC transporter 18 158 4.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17025 fb2645376591d4b807f071de0ba40a38 229 SUPERFAMILY SSF52540 3 217 2.66E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17025 fb2645376591d4b807f071de0ba40a38 229 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 3 229 3.8E-98 T 28-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AL504_RS17025 fb2645376591d4b807f071de0ba40a38 229 SMART SM00382 26 215 3.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS00725 d967593816e25a330f77154573a9fbfc 241 Pfam PF13460 NAD(P)H-binding 7 219 1.6E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS00725 d967593816e25a330f77154573a9fbfc 241 Gene3D G3DSA:3.40.50.720 1 219 1.0E-14 T 28-03-2018 AL504_RS00725 d967593816e25a330f77154573a9fbfc 241 SUPERFAMILY SSF51735 1 227 2.58E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS22145 32e26c15fd63f83ccc4d03273345be7f 96 Pfam PF13227 Protein of unknown function (DUF4035) 29 76 8.9E-9 T 28-03-2018 IPR025116 Protein of unknown function DUF4035 AL504_RS04950 6bf21806c6ee60c219e8c0888d0fe39a 1207 Pfam PF01968 Hydantoinase/oxoprolinase 203 489 5.7E-114 T 28-03-2018 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403 AL504_RS04950 6bf21806c6ee60c219e8c0888d0fe39a 1207 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 184 9.8E-60 T 28-03-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403 AL504_RS04950 6bf21806c6ee60c219e8c0888d0fe39a 1207 Pfam PF02538 Hydantoinase B/oxoprolinase 689 1206 1.3E-198 T 28-03-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403 AL504_RS04950 6bf21806c6ee60c219e8c0888d0fe39a 1207 Gene3D G3DSA:3.30.420.40 6 198 0.1 T 28-03-2018 AL504_RS03670 5a42257db02871e904fb54d5c85c4b48 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 5.1E-70 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03670 5a42257db02871e904fb54d5c85c4b48 325 SUPERFAMILY SSF53850 116 284 3.17E-17 T 28-03-2018 AL504_RS03670 5a42257db02871e904fb54d5c85c4b48 325 PIRSF PIRSF017082 3 325 1.1E-76 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03670 5a42257db02871e904fb54d5c85c4b48 325 Gene3D G3DSA:3.40.190.10 132 296 7.0E-17 T 28-03-2018 AL504_RS09740 98cfda5e7fad43895174d1fa3219893c 80 SUPERFAMILY SSF47413 6 59 4.5E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS09740 98cfda5e7fad43895174d1fa3219893c 80 Gene3D G3DSA:1.10.260.40 1 71 1.1E-6 T 28-03-2018 AL504_RS31150 881202a7f6cb07aad753926de5fdb64f 132 Gene3D G3DSA:3.30.1330.40 10 132 3.9E-26 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS31150 881202a7f6cb07aad753926de5fdb64f 132 Pfam PF01042 Endoribonuclease L-PSP 18 130 2.2E-16 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS31150 881202a7f6cb07aad753926de5fdb64f 132 SUPERFAMILY SSF55298 2 131 2.2E-25 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 Gene3D G3DSA:3.30.300.30 405 506 5.1E-25 T 28-03-2018 AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 Pfam PF13193 AMP-binding enzyme C-terminal domain 420 495 8.8E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 Gene3D G3DSA:2.30.38.10 323 404 3.1E-21 T 28-03-2018 AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 SUPERFAMILY SSF56801 7 505 1.57E-134 T 28-03-2018 AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 Gene3D G3DSA:3.40.50.980 170 322 5.7E-44 T 28-03-2018 AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 Gene3D G3DSA:3.40.50.980 7 169 9.9E-40 T 28-03-2018 AL504_RS14290 3fe853894f575b12e001b671df64fd84 506 Pfam PF00501 AMP-binding enzyme 15 411 1.0E-94 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS20440 da14769da8d07007f75b8a11e8aeb999 189 Gene3D G3DSA:2.160.10.10 38 170 1.6E-34 T 28-03-2018 AL504_RS20440 da14769da8d07007f75b8a11e8aeb999 189 Gene3D G3DSA:2.160.10.10 2 37 1.7E-10 T 28-03-2018 AL504_RS20440 da14769da8d07007f75b8a11e8aeb999 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 47 4.6E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS20440 da14769da8d07007f75b8a11e8aeb999 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 73 3.2E-4 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS20440 da14769da8d07007f75b8a11e8aeb999 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 100 134 1.2E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS20440 da14769da8d07007f75b8a11e8aeb999 189 SUPERFAMILY SSF51161 2 158 2.08E-43 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS26015 ab9f22e30ddee7bffab3c80f1963175f 151 SUPERFAMILY SSF51316 14 148 2.3E-40 T 28-03-2018 IPR011057 Mss4-like AL504_RS26015 ab9f22e30ddee7bffab3c80f1963175f 151 Gene3D G3DSA:3.90.1590.10 1 150 5.7E-39 T 28-03-2018 AL504_RS26015 ab9f22e30ddee7bffab3c80f1963175f 151 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 40 129 4.3E-23 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL504_RS18665 5f55d799b37e1db2bf5dc55bae0cdab0 110 SUPERFAMILY SSF103481 10 107 3.27E-6 T 28-03-2018 AL504_RS18665 5f55d799b37e1db2bf5dc55bae0cdab0 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 3 109 5.2E-39 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AL504_RS18665 5f55d799b37e1db2bf5dc55bae0cdab0 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 24.511 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AL504_RS15635 7716829e68a85684036dd01cd1031d0a 419 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 280 378 2.1E-10 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS15635 7716829e68a85684036dd01cd1031d0a 419 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 197 2.5E-18 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS15635 7716829e68a85684036dd01cd1031d0a 419 Gene3D G3DSA:3.40.190.10 292 380 4.0E-4 T 28-03-2018 AL504_RS16715 b651f8d6f29fa73d3257526a9c26dabf 389 Pfam PF13458 Periplasmic binding protein 24 360 1.6E-66 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS16715 b651f8d6f29fa73d3257526a9c26dabf 389 Gene3D G3DSA:3.40.50.2300 162 301 5.4E-26 T 28-03-2018 AL504_RS16715 b651f8d6f29fa73d3257526a9c26dabf 389 SUPERFAMILY SSF53822 24 367 2.78E-78 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS16715 b651f8d6f29fa73d3257526a9c26dabf 389 Gene3D G3DSA:3.40.50.2300 25 161 9.7E-20 T 28-03-2018 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 PIRSF PIRSF016578 2 393 7.3E-20 T 28-03-2018 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 218 3.6E-18 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 SUPERFAMILY SSF47203 234 391 1.24E-44 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 Gene3D G3DSA:2.40.110.10 119 224 8.4E-25 T 28-03-2018 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 385 5.7E-37 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 111 1.2E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 Gene3D G3DSA:1.20.140.10 225 397 3.1E-44 T 28-03-2018 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 Gene3D G3DSA:1.10.540.10 1 118 1.7E-27 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS24045 41dbf77f0a9e135dccad9d1fefa60aa4 401 SUPERFAMILY SSF56645 3 227 1.7E-53 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS22240 0b4b703cc0feda4fecf401c558ccfab7 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL504_RS22240 0b4b703cc0feda4fecf401c558ccfab7 93 Gene3D G3DSA:3.10.50.40 1 93 1.1E-34 T 28-03-2018 AL504_RS22240 0b4b703cc0feda4fecf401c558ccfab7 93 SUPERFAMILY SSF54534 4 92 5.44E-30 T 28-03-2018 AL504_RS22240 0b4b703cc0feda4fecf401c558ccfab7 93 Pfam PF13616 PPIC-type PPIASE domain 4 92 4.2E-26 T 28-03-2018 AL504_RS31000 457fe6a0c385cd9719c6cffc6e578423 197 Pfam PF06805 Bacteriophage lambda tail assembly protein I 7 89 8.2E-11 T 28-03-2018 IPR010654 Bacteriophage lambda tail assembly I AL504_RS20695 a1d9da5630aba5b089db765a8c055aa9 287 SUPERFAMILY SSF56235 2 240 8.38E-34 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS20695 a1d9da5630aba5b089db765a8c055aa9 287 Gene3D G3DSA:3.60.20.10 2 223 1.2E-38 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS20695 a1d9da5630aba5b089db765a8c055aa9 287 PIRSF PIRSF009120 1 248 5.6E-111 T 28-03-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 AL504_RS20695 a1d9da5630aba5b089db765a8c055aa9 287 Pfam PF00227 Proteasome subunit 87 183 6.1E-6 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL504_RS09200 e2c17ec4f303ad36defa04b3c5d9a16e 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.793 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09200 e2c17ec4f303ad36defa04b3c5d9a16e 86 Gene3D G3DSA:3.30.1320.10 1 79 3.6E-30 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09200 e2c17ec4f303ad36defa04b3c5d9a16e 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 77 5.0E-27 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09200 e2c17ec4f303ad36defa04b3c5d9a16e 86 SUPERFAMILY SSF54565 1 76 1.01E-27 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS09200 e2c17ec4f303ad36defa04b3c5d9a16e 86 Pfam PF00886 Ribosomal protein S16 8 68 8.1E-24 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS05200 f97ac3d297dadf5cde2e53f1e0b27df9 118 SUPERFAMILY SSF54593 8 116 1.61E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS05200 f97ac3d297dadf5cde2e53f1e0b27df9 118 Gene3D G3DSA:3.10.180.10 4 118 5.1E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS05200 f97ac3d297dadf5cde2e53f1e0b27df9 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 112 1.3E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS10235 796d5bfbb748e6eaa659c98d33529af9 437 Pfam PF03781 Sulfatase-modifying factor enzyme 1 192 435 7.6E-33 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL504_RS10235 796d5bfbb748e6eaa659c98d33529af9 437 Pfam PF12867 DinB superfamily 26 160 3.2E-14 T 28-03-2018 IPR024775 DinB-like domain AL504_RS10235 796d5bfbb748e6eaa659c98d33529af9 437 Gene3D G3DSA:3.90.1580.10 179 437 1.5E-53 T 28-03-2018 AL504_RS10235 796d5bfbb748e6eaa659c98d33529af9 437 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 24 434 5.1E-167 T 28-03-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 AL504_RS10235 796d5bfbb748e6eaa659c98d33529af9 437 SUPERFAMILY SSF56436 190 436 3.3E-67 T 28-03-2018 IPR016187 C-type lectin fold AL504_RS10235 796d5bfbb748e6eaa659c98d33529af9 437 Gene3D G3DSA:1.20.120.450 14 168 6.2E-11 T 28-03-2018 AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 1.9E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 Pfam PF07729 FCD domain 96 220 9.2E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 SUPERFAMILY SSF46785 4 75 1.44E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 Gene3D G3DSA:1.20.120.530 74 231 1.8E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 SUPERFAMILY SSF48008 91 226 1.1E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 Gene3D G3DSA:1.10.10.10 2 73 6.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.0E-4 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.0E-4 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 SMART SM00895 95 221 3.5E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL504_RS21410 32c244efd04e255044d72c0cb27ed25f 239 SMART SM00345 12 71 2.7E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 SUPERFAMILY SSF51338 344 379 6.01E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 SUPERFAMILY SSF51338 2 54 6.01E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 PIRSF PIRSF038971 2 377 9.9E-114 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 Gene3D G3DSA:3.20.20.140 58 299 7.0E-15 T 28-03-2018 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 SUPERFAMILY SSF51556 54 179 1.02E-18 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 SUPERFAMILY SSF51556 216 343 1.02E-18 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 Gene3D G3DSA:2.30.40.10 300 380 5.5E-14 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 377 1.1E-120 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 Pfam PF01979 Amidohydrolase family 51 373 8.2E-15 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS25985 5ab6a1d05195791291d2ca132ba870d9 399 Gene3D G3DSA:2.30.40.10 3 57 3.3E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 SUPERFAMILY SSF53067 9 153 4.37E-37 T 28-03-2018 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.1E-61 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 1.1E-61 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.1E-61 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 1.1E-61 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.1E-61 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 Gene3D G3DSA:3.30.420.40 8 173 1.1E-38 T 28-03-2018 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 3.1E-153 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 Pfam PF06723 MreB/Mbl protein 11 340 3.7E-147 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 Gene3D G3DSA:3.30.420.40 257 322 1.9E-10 T 28-03-2018 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 Gene3D G3DSA:3.90.640.10 191 256 3.3E-26 T 28-03-2018 AL504_RS20990 a81beb0e3d5f98198b2f26251faef598 347 SUPERFAMILY SSF53067 156 337 8.96E-49 T 28-03-2018 AL504_RS08510 204e6aa6e2f9b67274995453d2cdc279 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 164 6.2E-28 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS16720 4da82dfef5eb09548ea96fbe833feca9 303 SUPERFAMILY SSF56529 78 302 1.44E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS16720 4da82dfef5eb09548ea96fbe833feca9 303 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 90 301 4.4E-68 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS16720 4da82dfef5eb09548ea96fbe833feca9 303 Gene3D G3DSA:3.90.850.10 56 303 1.3E-76 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS24595 a79ee154ef63edfb85b03958d14d0d16 390 Gene3D G3DSA:1.20.1250.20 13 202 1.8E-22 T 28-03-2018 AL504_RS24595 a79ee154ef63edfb85b03958d14d0d16 390 Pfam PF07690 Major Facilitator Superfamily 29 351 6.6E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS24595 a79ee154ef63edfb85b03958d14d0d16 390 SUPERFAMILY SSF103473 18 384 8.63E-32 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24595 a79ee154ef63edfb85b03958d14d0d16 390 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 4.1E-5 T 28-03-2018 AL504_RS24595 a79ee154ef63edfb85b03958d14d0d16 390 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 4.1E-5 T 28-03-2018 AL504_RS24595 a79ee154ef63edfb85b03958d14d0d16 390 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 4.1E-5 T 28-03-2018 AL504_RS12915 c1ccee15926ae7f9b66db5e0923ddbeb 227 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS12915 c1ccee15926ae7f9b66db5e0923ddbeb 227 SUPERFAMILY SSF52540 1 202 1.36E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12915 c1ccee15926ae7f9b66db5e0923ddbeb 227 SMART SM00382 26 199 3.5E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12915 c1ccee15926ae7f9b66db5e0923ddbeb 227 Pfam PF00005 ABC transporter 17 149 7.5E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12915 c1ccee15926ae7f9b66db5e0923ddbeb 227 Gene3D G3DSA:3.40.50.300 1 216 2.4E-53 T 28-03-2018 AL504_RS28390 488c6ba9455f9f5776e35977402ece3b 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 6.9E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS28390 488c6ba9455f9f5776e35977402ece3b 222 SUPERFAMILY SSF48498 84 219 1.96E-33 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS28390 488c6ba9455f9f5776e35977402ece3b 222 Gene3D G3DSA:1.10.357.10 53 219 2.9E-36 T 28-03-2018 AL504_RS28390 488c6ba9455f9f5776e35977402ece3b 222 Gene3D G3DSA:1.10.10.60 2 52 2.3E-19 T 28-03-2018 AL504_RS28390 488c6ba9455f9f5776e35977402ece3b 222 SUPERFAMILY SSF46689 4 77 4.67E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS28390 488c6ba9455f9f5776e35977402ece3b 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.1E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS28390 488c6ba9455f9f5776e35977402ece3b 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.1E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS11305 8bb7e6ad5112a8ff31312f9ae38fcce0 296 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 25 289 6.2E-127 T 28-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AL504_RS11305 8bb7e6ad5112a8ff31312f9ae38fcce0 296 Gene3D G3DSA:1.10.3720.10 29 291 5.5E-48 T 28-03-2018 AL504_RS11305 8bb7e6ad5112a8ff31312f9ae38fcce0 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 290 1.3E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS11305 8bb7e6ad5112a8ff31312f9ae38fcce0 296 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 28 284 1.1E-96 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AL504_RS11305 8bb7e6ad5112a8ff31312f9ae38fcce0 296 SUPERFAMILY SSF161098 33 283 8.13E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS06145 3a2e05ea739947c68fde7aae5f221ac6 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 148 34.306 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS06145 3a2e05ea739947c68fde7aae5f221ac6 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3 146 8.4E-59 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS06145 3a2e05ea739947c68fde7aae5f221ac6 151 SUPERFAMILY SSF54637 5 147 2.22E-49 T 28-03-2018 IPR029069 HotDog domain AL504_RS06145 3a2e05ea739947c68fde7aae5f221ac6 151 Gene3D G3DSA:3.10.129.10 1 151 1.4E-57 T 28-03-2018 AL504_RS06145 3a2e05ea739947c68fde7aae5f221ac6 151 Pfam PF07977 FabA-like domain 12 141 1.1E-41 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 SMART SM00562 3 140 5.8E-83 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 Gene3D G3DSA:3.30.70.141 55 139 4.0E-33 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 Gene3D G3DSA:3.30.70.141 1 54 7.0E-15 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.007 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 Pfam PF00334 Nucleoside diphosphate kinase 4 136 1.5E-53 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.2E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.2E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.2E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.2E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.2E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS09155 e2bc0ebd532b26b2c385c7b5565eddf6 141 SUPERFAMILY SSF54919 1 139 6.02E-56 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 75 284 4.5E-52 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 SUPERFAMILY SSF51306 88 290 1.46E-69 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 Pfam PF10502 Signal peptidase, peptidase S26 243 281 8.4E-7 T 28-03-2018 IPR019533 Peptidase S26 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 Gene3D G3DSA:2.10.109.10 86 293 1.5E-59 T 28-03-2018 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 ProSitePatterns PS00760 Signal peptidases I lysine active site. 156 168 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 Pfam PF00717 Peptidase S24-like 96 178 5.8E-22 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 ProSitePatterns PS00501 Signal peptidases I serine active site. 99 106 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 154 166 4.1E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 244 263 4.1E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL504_RS12110 27d0bd6f31f27e1275c41a8b6dc14913 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 90 106 4.1E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL504_RS19000 86a04f3b313c2a760d1e57e2ba84d4e9 352 Gene3D G3DSA:3.40.190.10 146 351 2.8E-21 T 28-03-2018 AL504_RS19000 86a04f3b313c2a760d1e57e2ba84d4e9 352 Gene3D G3DSA:3.40.190.10 33 145 1.8E-9 T 28-03-2018 AL504_RS19000 86a04f3b313c2a760d1e57e2ba84d4e9 352 Pfam PF09084 NMT1/THI5 like 51 269 8.5E-22 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS19000 86a04f3b313c2a760d1e57e2ba84d4e9 352 SUPERFAMILY SSF53850 40 278 1.97E-32 T 28-03-2018 AL504_RS03935 144834ffdd059831de92c825c975963f 484 Gene3D G3DSA:2.30.40.10 401 472 2.8E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS03935 144834ffdd059831de92c825c975963f 484 Gene3D G3DSA:2.30.40.10 8 75 5.5E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS03935 144834ffdd059831de92c825c975963f 484 SUPERFAMILY SSF51338 9 62 3.87E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS03935 144834ffdd059831de92c825c975963f 484 SUPERFAMILY SSF51338 420 478 3.87E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS03935 144834ffdd059831de92c825c975963f 484 SUPERFAMILY SSF51556 63 420 3.85E-91 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS03935 144834ffdd059831de92c825c975963f 484 Gene3D G3DSA:3.20.20.140 76 400 1.9E-81 T 28-03-2018 AL504_RS03935 144834ffdd059831de92c825c975963f 484 Pfam PF07969 Amidohydrolase family 53 252 2.2E-17 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS03935 144834ffdd059831de92c825c975963f 484 Pfam PF07969 Amidohydrolase family 318 464 3.2E-17 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS03735 fac9c87a5c0782e2ced2bab125f0aa52 284 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 256 5.3E-27 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS03735 fac9c87a5c0782e2ced2bab125f0aa52 284 Gene3D G3DSA:3.90.226.10 1 273 2.1E-46 T 28-03-2018 AL504_RS03735 fac9c87a5c0782e2ced2bab125f0aa52 284 SUPERFAMILY SSF52096 4 251 5.63E-46 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS28975 8b0a7fffa8e8688b22b17287d874bfa0 472 SUPERFAMILY SSF141868 225 465 3.79E-62 T 28-03-2018 IPR001633 EAL domain AL504_RS28975 8b0a7fffa8e8688b22b17287d874bfa0 472 SMART SM00052 215 461 1.6E-55 T 28-03-2018 IPR001633 EAL domain AL504_RS28975 8b0a7fffa8e8688b22b17287d874bfa0 472 Gene3D G3DSA:3.20.20.450 169 464 1.1E-65 T 28-03-2018 IPR001633 EAL domain AL504_RS28975 8b0a7fffa8e8688b22b17287d874bfa0 472 Pfam PF00563 EAL domain 224 456 2.7E-55 T 28-03-2018 IPR001633 EAL domain AL504_RS24640 bc9c277209e69d2f96ab7f1410166692 444 Gene3D G3DSA:1.20.1250.20 255 436 3.6E-10 T 28-03-2018 AL504_RS24640 bc9c277209e69d2f96ab7f1410166692 444 Gene3D G3DSA:1.20.1250.20 34 248 3.6E-17 T 28-03-2018 AL504_RS24640 bc9c277209e69d2f96ab7f1410166692 444 SUPERFAMILY SSF103473 36 435 5.36E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24640 bc9c277209e69d2f96ab7f1410166692 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS24640 bc9c277209e69d2f96ab7f1410166692 444 Pfam PF07690 Major Facilitator Superfamily 76 404 1.3E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS06275 b79e5b8157ab3d572a0335b8224e2400 125 Pfam PF03646 FlaG protein 37 119 6.5E-23 T 28-03-2018 IPR005186 FlaG protein AL504_RS06275 b79e5b8157ab3d572a0335b8224e2400 125 SUPERFAMILY SSF160214 33 119 5.1E-23 T 28-03-2018 IPR005186 FlaG protein AL504_RS06275 b79e5b8157ab3d572a0335b8224e2400 125 Gene3D G3DSA:3.30.160.170 26 121 1.7E-22 T 28-03-2018 IPR005186 FlaG protein AL504_RS14010 5ca0b747de2fe1420b991541b1d81a40 170 SUPERFAMILY SSF88946 11 75 4.71E-15 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14010 5ca0b747de2fe1420b991541b1d81a40 170 Pfam PF08281 Sigma-70, region 4 111 161 1.1E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14010 5ca0b747de2fe1420b991541b1d81a40 170 Pfam PF04542 Sigma-70 region 2 15 78 1.5E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14010 5ca0b747de2fe1420b991541b1d81a40 170 Gene3D G3DSA:1.10.1740.10 6 76 4.0E-16 T 28-03-2018 AL504_RS14010 5ca0b747de2fe1420b991541b1d81a40 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 161 1.6E-19 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14010 5ca0b747de2fe1420b991541b1d81a40 170 SUPERFAMILY SSF88659 88 161 3.71E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS14010 5ca0b747de2fe1420b991541b1d81a40 170 Gene3D G3DSA:1.10.10.10 77 163 2.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS05300 5cb8584b847c76527d9a29a4a9090034 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 324 3.8E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS05300 5cb8584b847c76527d9a29a4a9090034 328 Gene3D G3DSA:3.40.190.10 155 296 3.5E-8 T 28-03-2018 AL504_RS05300 5cb8584b847c76527d9a29a4a9090034 328 PIRSF PIRSF017082 1 326 3.9E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS05300 5cb8584b847c76527d9a29a4a9090034 328 SUPERFAMILY SSF53850 116 287 7.06E-10 T 28-03-2018 AL504_RS05545 b7ad73b00ec64f8a32622461d07f271d 124 Gene3D G3DSA:1.20.120.550 1 124 4.7E-19 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AL504_RS05545 b7ad73b00ec64f8a32622461d07f271d 124 Pfam PF01124 MAPEG family 4 121 1.7E-21 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AL504_RS05545 b7ad73b00ec64f8a32622461d07f271d 124 SUPERFAMILY SSF161084 3 120 6.02E-23 T 28-03-2018 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 Gene3D G3DSA:3.50.50.60 1 362 9.0E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.5E-17 T 28-03-2018 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 149 164 4.5E-17 T 28-03-2018 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 4.5E-17 T 28-03-2018 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 4.5E-17 T 28-03-2018 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 Pfam PF01494 FAD binding domain 7 316 1.5E-18 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 SUPERFAMILY SSF51905 266 374 5.37E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS13635 9a3654e816ea411efb7afc71eea3e02e 390 SUPERFAMILY SSF51905 7 170 5.37E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27480 bbbf0ce227d35343c61bfe4ddf9dd293 189 SUPERFAMILY SSF51182 61 184 3.78E-17 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS27480 bbbf0ce227d35343c61bfe4ddf9dd293 189 Pfam PF07883 Cupin domain 117 184 1.2E-9 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS27480 bbbf0ce227d35343c61bfe4ddf9dd293 189 Gene3D G3DSA:2.60.120.10 79 185 1.7E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS27480 bbbf0ce227d35343c61bfe4ddf9dd293 189 Gene3D G3DSA:1.10.260.40 7 78 3.9E-18 T 28-03-2018 AL504_RS27480 bbbf0ce227d35343c61bfe4ddf9dd293 189 Pfam PF01381 Helix-turn-helix 22 75 3.4E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS27480 bbbf0ce227d35343c61bfe4ddf9dd293 189 SMART SM00530 21 76 3.1E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS27480 bbbf0ce227d35343c61bfe4ddf9dd293 189 SUPERFAMILY SSF47413 14 80 1.37E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS14755 c87875b78ad53919e2493f9824e95ffc 359 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 355 34.234 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS14755 c87875b78ad53919e2493f9824e95ffc 359 Gene3D G3DSA:3.40.50.2000 1 174 2.1E-39 T 28-03-2018 AL504_RS14755 c87875b78ad53919e2493f9824e95ffc 359 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 145 8.6E-35 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS14755 c87875b78ad53919e2493f9824e95ffc 359 SUPERFAMILY SSF53756 7 355 4.49E-116 T 28-03-2018 AL504_RS14755 c87875b78ad53919e2493f9824e95ffc 359 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 341 1.2E-34 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL504_RS14755 c87875b78ad53919e2493f9824e95ffc 359 Gene3D G3DSA:3.40.50.2000 175 349 1.7E-27 T 28-03-2018 AL504_RS14755 c87875b78ad53919e2493f9824e95ffc 359 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 350 1.0E-97 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL504_RS15840 6d94cb627898bdf9637d9ee5172f2efd 592 SUPERFAMILY SSF161098 300 427 2.35E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15840 6d94cb627898bdf9637d9ee5172f2efd 592 SUPERFAMILY SSF161098 456 589 2.35E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15840 6d94cb627898bdf9637d9ee5172f2efd 592 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 276 8.4E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15840 6d94cb627898bdf9637d9ee5172f2efd 592 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 382 587 1.9E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15840 6d94cb627898bdf9637d9ee5172f2efd 592 Gene3D G3DSA:1.10.3720.10 303 591 9.6E-33 T 28-03-2018 AL504_RS15840 6d94cb627898bdf9637d9ee5172f2efd 592 Gene3D G3DSA:1.10.3720.10 12 284 2.2E-34 T 28-03-2018 AL504_RS15840 6d94cb627898bdf9637d9ee5172f2efd 592 SUPERFAMILY SSF161098 5 282 6.28E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 Gene3D G3DSA:3.50.50.60 18 410 1.1E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 Pfam PF01494 FAD binding domain 24 368 6.9E-60 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 SUPERFAMILY SSF51905 23 197 3.96E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 SUPERFAMILY SSF51905 290 397 3.96E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 334 2.7E-36 T 28-03-2018 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 2.7E-36 T 28-03-2018 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 24 46 2.7E-36 T 28-03-2018 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 176 191 2.7E-36 T 28-03-2018 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 354 2.7E-36 T 28-03-2018 AL504_RS22580 036b225c993bcc51e770ba56f444568b 568 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 318 2.7E-36 T 28-03-2018 AL504_RS02780 0af5d8b3b285e4381eecf782678831b4 370 SUPERFAMILY SSF56645 17 218 2.49E-25 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS02780 0af5d8b3b285e4381eecf782678831b4 370 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 33 112 3.0E-4 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS02780 0af5d8b3b285e4381eecf782678831b4 370 Gene3D G3DSA:1.10.540.10 9 113 1.6E-9 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL504_RS02780 0af5d8b3b285e4381eecf782678831b4 370 Gene3D G3DSA:2.40.110.10 125 218 3.4E-9 T 28-03-2018 AL504_RS14020 2f891aec20c6dbb7d09540a38d6d5934 701 SUPERFAMILY SSF56935 21 701 1.16E-98 T 28-03-2018 AL504_RS14020 2f891aec20c6dbb7d09540a38d6d5934 701 Gene3D G3DSA:2.40.170.20 178 701 7.7E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS14020 2f891aec20c6dbb7d09540a38d6d5934 701 Gene3D G3DSA:2.170.130.10 20 176 8.0E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS14020 2f891aec20c6dbb7d09540a38d6d5934 701 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 684 701 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL504_RS14020 2f891aec20c6dbb7d09540a38d6d5934 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 164 1.7E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS14020 2f891aec20c6dbb7d09540a38d6d5934 701 Pfam PF00593 TonB dependent receptor 265 699 2.6E-34 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS14020 2f891aec20c6dbb7d09540a38d6d5934 701 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 701 1.2E-91 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 Gene3D G3DSA:1.25.40.10 64 135 1.7E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 5 135 7.8E-33 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 SUPERFAMILY SSF48452 16 118 8.47E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 54 76 2.5E-7 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 86 108 2.5E-7 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 30 49 2.5E-7 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 5 28 2.5E-7 T 28-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL504_RS15380 9f5c79f30c3b6949bf54eb0bfc6e79fa 143 Gene3D G3DSA:1.25.40.10 2 63 7.9E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS12465 691c6cfe10c13020895d1da2184bcd44 161 Gene3D G3DSA:3.30.1330.50 1 161 3.7E-72 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL504_RS12465 691c6cfe10c13020895d1da2184bcd44 161 SUPERFAMILY SSF69765 4 160 1.44E-64 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL504_RS12465 691c6cfe10c13020895d1da2184bcd44 161 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL504_RS12465 691c6cfe10c13020895d1da2184bcd44 161 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 2.4E-63 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL504_RS12465 691c6cfe10c13020895d1da2184bcd44 161 Pfam PF02542 YgbB family 5 158 3.6E-64 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL504_RS12465 691c6cfe10c13020895d1da2184bcd44 161 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.649 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL504_RS13700 15e2d832e9e80e43d802d7d2dbd9e01d 334 Pfam PF01699 Sodium/calcium exchanger protein 5 157 1.9E-13 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL504_RS13700 15e2d832e9e80e43d802d7d2dbd9e01d 334 Pfam PF01699 Sodium/calcium exchanger protein 194 327 2.5E-9 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL504_RS25380 26d601146932f33102e6b6ddb81102cd 141 SUPERFAMILY SSF52402 1 141 4.54E-27 T 28-03-2018 AL504_RS25380 26d601146932f33102e6b6ddb81102cd 141 Pfam PF00582 Universal stress protein family 1 141 1.0E-21 T 28-03-2018 IPR006016 UspA GO:0006950 AL504_RS25380 26d601146932f33102e6b6ddb81102cd 141 Gene3D G3DSA:3.40.50.620 1 141 1.7E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS25380 26d601146932f33102e6b6ddb81102cd 141 PRINTS PR01438 Universal stress protein signature 1 18 1.6E-15 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS25380 26d601146932f33102e6b6ddb81102cd 141 PRINTS PR01438 Universal stress protein signature 101 113 1.6E-15 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS25380 26d601146932f33102e6b6ddb81102cd 141 PRINTS PR01438 Universal stress protein signature 119 141 1.6E-15 T 28-03-2018 IPR006015 Universal stress protein A AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 483 6.7E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 SMART SM00283 268 515 5.5E-98 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 SUPERFAMILY SSF47170 27 178 1.44E-12 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 Pfam PF00672 HAMP domain 215 263 3.8E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.6E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 4.6E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 4.6E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 4.6E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 4.6E-62 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 Gene3D G3DSA:1.20.120.30 23 187 5.5E-22 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 Gene3D G3DSA:1.10.287.1060 243 326 0.0055 T 28-03-2018 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 Pfam PF02203 Tar ligand binding domain homologue 1 168 1.0E-17 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 SUPERFAMILY SSF58104 235 519 2.75E-77 T 28-03-2018 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 Gene3D G3DSA:1.10.287.950 327 519 4.2E-51 T 28-03-2018 AL504_RS06395 2562692046f1758d4b1fc2cfd0d7649a 627 SMART SM00304 215 267 9.2E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS11150 9dd5c59613fa3069db94bc78ce5064df 151 Gene3D G3DSA:3.10.50.40 4 151 6.3E-15 T 28-03-2018 AL504_RS11150 9dd5c59613fa3069db94bc78ce5064df 151 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 7 79 8.6E-10 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL504_RS11150 9dd5c59613fa3069db94bc78ce5064df 151 SUPERFAMILY SSF54534 5 150 1.43E-28 T 28-03-2018 AL504_RS17085 2813a127ca3d27da17aeb359a452b8cf 312 SUPERFAMILY SSF52402 15 234 3.24E-54 T 28-03-2018 AL504_RS17085 2813a127ca3d27da17aeb359a452b8cf 312 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 7 269 55.722 T 28-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AL504_RS17085 2813a127ca3d27da17aeb359a452b8cf 312 PIRSF PIRSF004976 2 272 3.0E-69 T 28-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AL504_RS17085 2813a127ca3d27da17aeb359a452b8cf 312 Gene3D G3DSA:3.40.50.620 6 238 1.8E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS17085 2813a127ca3d27da17aeb359a452b8cf 312 Pfam PF01171 PP-loop family 40 202 3.3E-14 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL504_RS08130 9fd3940016ebb39b51807c7121133e3c 239 Gene3D G3DSA:3.60.21.10 7 231 7.4E-30 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS08130 9fd3940016ebb39b51807c7121133e3c 239 SUPERFAMILY SSF56300 10 220 6.69E-37 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS08130 9fd3940016ebb39b51807c7121133e3c 239 Pfam PF00149 Calcineurin-like phosphoesterase 18 190 1.7E-10 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS27885 34394501e501df541945c81df0be7c4f 184 Pfam PF03358 NADPH-dependent FMN reductase 5 148 7.8E-34 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL504_RS27885 34394501e501df541945c81df0be7c4f 184 Gene3D G3DSA:3.40.50.360 2 184 2.0E-34 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS27885 34394501e501df541945c81df0be7c4f 184 SUPERFAMILY SSF52218 5 175 5.59E-44 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS22780 6e82fb77e8013a9d95ddfcd0f78fa7e0 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 212 2.0E-44 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL504_RS22780 6e82fb77e8013a9d95ddfcd0f78fa7e0 335 PIRSF PIRSF000267 2 335 2.9E-89 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL504_RS22780 6e82fb77e8013a9d95ddfcd0f78fa7e0 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 4.3E-98 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL504_RS04175 5c59bba42f0a4eabd9e3c0fed657ef70 307 Gene3D G3DSA:3.40.190.10 94 181 4.0E-10 T 28-03-2018 AL504_RS04175 5c59bba42f0a4eabd9e3c0fed657ef70 307 SUPERFAMILY SSF53850 95 298 7.14E-43 T 28-03-2018 AL504_RS04175 5c59bba42f0a4eabd9e3c0fed657ef70 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 9.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS04175 5c59bba42f0a4eabd9e3c0fed657ef70 307 Gene3D G3DSA:1.10.10.10 3 89 5.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04175 5c59bba42f0a4eabd9e3c0fed657ef70 307 Gene3D G3DSA:3.40.190.10 182 270 4.2E-26 T 28-03-2018 AL504_RS04175 5c59bba42f0a4eabd9e3c0fed657ef70 307 SUPERFAMILY SSF46785 6 117 7.61E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04175 5c59bba42f0a4eabd9e3c0fed657ef70 307 Pfam PF03466 LysR substrate binding domain 94 298 1.3E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS08550 de3f9de6aa007ee380f6070d2decbe30 177 SUPERFAMILY SSF109604 26 95 7.21E-9 T 28-03-2018 AL504_RS08550 de3f9de6aa007ee380f6070d2decbe30 177 SMART SM00471 22 90 0.0036 T 28-03-2018 IPR003607 HD/PDEase domain AL504_RS08550 de3f9de6aa007ee380f6070d2decbe30 177 Gene3D G3DSA:1.10.3210.10 4 151 3.2E-7 T 28-03-2018 AL504_RS08550 de3f9de6aa007ee380f6070d2decbe30 177 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 3 174 7.1E-71 T 28-03-2018 IPR017670 Phosphonate degradation operon associated HDIG domain protein AL504_RS08550 de3f9de6aa007ee380f6070d2decbe30 177 Pfam PF01966 HD domain 28 85 4.0E-6 T 28-03-2018 IPR006674 HD domain AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 345 5.9E-108 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 SUPERFAMILY SSF160544 242 348 3.92E-33 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 Gene3D G3DSA:3.40.1690.10 216 351 2.7E-49 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 7 347 9.3E-125 T 28-03-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 1.2E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 1.2E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.2E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 1.2E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS15315 fa3e731e6f4d1854d0aa7a659534fc88 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 1.2E-39 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL504_RS03155 d2000cc25815cd80192683ce9cb951ce 263 Gene3D G3DSA:3.40.190.10 183 263 4.7E-11 T 28-03-2018 AL504_RS03155 d2000cc25815cd80192683ce9cb951ce 263 Gene3D G3DSA:3.40.190.10 27 182 2.4E-40 T 28-03-2018 AL504_RS03155 d2000cc25815cd80192683ce9cb951ce 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 258 1.1E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS03155 d2000cc25815cd80192683ce9cb951ce 263 SMART SM00062 38 260 1.2E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS03155 d2000cc25815cd80192683ce9cb951ce 263 SUPERFAMILY SSF53850 2 260 2.36E-66 T 28-03-2018 AL504_RS03155 d2000cc25815cd80192683ce9cb951ce 263 SMART SM00079 36 259 0.0094 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL504_RS25655 f43c6a1eab87f63207c86c55dff5cfa5 167 SMART SM00903 16 160 1.1E-50 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS25655 f43c6a1eab87f63207c86c55dff5cfa5 167 SUPERFAMILY SSF50475 8 159 5.4E-45 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS25655 f43c6a1eab87f63207c86c55dff5cfa5 167 Gene3D G3DSA:2.30.110.10 4 163 6.7E-42 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS25655 f43c6a1eab87f63207c86c55dff5cfa5 167 Pfam PF01613 Flavin reductase like domain 17 158 3.7E-31 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS29610 91568896f2c625a302e49e33e552df39 303 PIRSF PIRSF017082 2 303 9.0E-67 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29610 91568896f2c625a302e49e33e552df39 303 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 32 299 2.0E-66 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS29610 91568896f2c625a302e49e33e552df39 303 SUPERFAMILY SSF53850 87 263 2.28E-16 T 28-03-2018 AL504_RS29610 91568896f2c625a302e49e33e552df39 303 Gene3D G3DSA:3.40.190.10 107 216 1.2E-17 T 28-03-2018 AL504_RS15455 71917ded9986f083360b1bf4e3281b0a 88 SUPERFAMILY SSF140129 9 82 2.09E-8 T 28-03-2018 AL504_RS15455 71917ded9986f083360b1bf4e3281b0a 88 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 15 86 4.9E-14 T 28-03-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 AL504_RS18820 3635b70135ba42ef487a2bf14c11905e 90 SUPERFAMILY SSF89447 13 72 8.89E-11 T 28-03-2018 AL504_RS18820 3635b70135ba42ef487a2bf14c11905e 90 Gene3D G3DSA:2.10.260.10 13 50 1.2E-7 T 28-03-2018 AL504_RS18820 3635b70135ba42ef487a2bf14c11905e 90 SMART SM00966 16 56 5.1E-5 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AL504_RS18820 3635b70135ba42ef487a2bf14c11905e 90 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 16 56 5.1E-9 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 3.9E-4 T 28-03-2018 AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 SUPERFAMILY SSF51735 1 227 3.31E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 Gene3D G3DSA:3.40.50.720 1 251 8.8E-52 T 28-03-2018 AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 Pfam PF00106 short chain dehydrogenase 6 195 5.3E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS01205 4d9798c3016f285fa8bda0cc38d6d666 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS30840 22f9ec2b39102fdb42b559c5434b7da8 362 SUPERFAMILY SSF51306 212 344 1.05E-15 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS30840 22f9ec2b39102fdb42b559c5434b7da8 362 Gene3D G3DSA:2.10.109.10 219 348 4.7E-17 T 28-03-2018 AL504_RS30840 22f9ec2b39102fdb42b559c5434b7da8 362 Pfam PF00717 Peptidase S24-like 259 328 5.6E-5 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL504_RS06405 09cda37b9a52ba391ae7e7c7e80a1b2c 419 SUPERFAMILY SSF64518 1 417 3.79E-65 T 28-03-2018 AL504_RS06405 09cda37b9a52ba391ae7e7c7e80a1b2c 419 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 3.2E-18 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL504_RS06405 09cda37b9a52ba391ae7e7c7e80a1b2c 419 Gene3D G3DSA:1.20.1330.10 38 394 1.3E-21 T 28-03-2018 AL504_RS06405 09cda37b9a52ba391ae7e7c7e80a1b2c 419 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 416 3.6E-85 T 28-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AL504_RS09980 ce3e18b928b918ed607c3d41743391bc 246 Pfam PF10707 PhoP regulatory network protein YrbL 23 224 3.8E-70 T 28-03-2018 IPR019647 PhoP regulatory network protein YrbL AL504_RS12085 e082fe22bff324d66f6df1d24ad6b40e 365 Gene3D G3DSA:3.40.50.1100 181 365 5.5E-22 T 28-03-2018 AL504_RS12085 e082fe22bff324d66f6df1d24ad6b40e 365 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 359 4.2E-60 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS12085 e082fe22bff324d66f6df1d24ad6b40e 365 Gene3D G3DSA:3.40.50.1100 74 180 5.2E-24 T 28-03-2018 AL504_RS12085 e082fe22bff324d66f6df1d24ad6b40e 365 SUPERFAMILY SSF53686 7 360 1.7E-59 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 SUPERFAMILY SSF47648 5 71 6.02E-16 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 Gene3D G3DSA:1.20.970.10 1 72 1.5E-15 T 28-03-2018 AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 1.1E-10 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 336 5.1E-123 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 SUPERFAMILY SSF52418 77 340 2.35E-93 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 Gene3D G3DSA:3.40.1030.10 74 343 3.3E-101 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 Pfam PF00591 Glycosyl transferase family, a/b domain 78 327 1.6E-90 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL504_RS17135 4d934159b98e45ea0d974bb674176db7 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.463 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL504_RS12565 6d4e59443bb09c0b4a325d793c117bd3 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12565 6d4e59443bb09c0b4a325d793c117bd3 158 Gene3D G3DSA:3.40.50.700 11 156 6.7E-48 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12565 6d4e59443bb09c0b4a325d793c117bd3 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 41.224 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12565 6d4e59443bb09c0b4a325d793c117bd3 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.8E-22 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12565 6d4e59443bb09c0b4a325d793c117bd3 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 151 2.0E-75 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS12565 6d4e59443bb09c0b4a325d793c117bd3 158 SUPERFAMILY SSF56770 9 151 1.31E-65 T 28-03-2018 AL504_RS15995 2ef52691e1c9cd52bba98e4da82de226 328 Gene3D G3DSA:1.10.10.60 221 278 3.0E-12 T 28-03-2018 AL504_RS15995 2ef52691e1c9cd52bba98e4da82de226 328 Pfam PF14525 AraC-binding-like domain 27 205 8.2E-47 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AL504_RS15995 2ef52691e1c9cd52bba98e4da82de226 328 Gene3D G3DSA:1.10.10.60 279 328 1.1E-4 T 28-03-2018 AL504_RS15995 2ef52691e1c9cd52bba98e4da82de226 328 SMART SM00342 240 324 4.5E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS15995 2ef52691e1c9cd52bba98e4da82de226 328 Pfam PF12833 Helix-turn-helix domain 246 325 4.5E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS15995 2ef52691e1c9cd52bba98e4da82de226 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 320 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL504_RS15995 2ef52691e1c9cd52bba98e4da82de226 328 SUPERFAMILY SSF46689 224 271 2.57E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS13565 2bd2b9ce63e242587b2d7775279f51b4 193 SUPERFAMILY SSF55811 17 178 3.11E-39 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS13565 2bd2b9ce63e242587b2d7775279f51b4 193 Gene3D G3DSA:3.90.79.10 47 183 6.1E-30 T 28-03-2018 AL504_RS13565 2bd2b9ce63e242587b2d7775279f51b4 193 Pfam PF14803 Nudix N-terminal 17 50 5.8E-18 T 28-03-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 AL504_RS13565 2bd2b9ce63e242587b2d7775279f51b4 193 Gene3D G3DSA:2.20.70.10 16 46 1.1E-16 T 28-03-2018 AL504_RS13565 2bd2b9ce63e242587b2d7775279f51b4 193 Pfam PF00293 NUDIX domain 53 156 1.7E-12 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS13565 2bd2b9ce63e242587b2d7775279f51b4 193 ProSitePatterns PS00893 Nudix box signature. 85 106 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL504_RS23430 6239b4869a6582f330a86db68bdc196a 163 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 22 157 20.26 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 AL504_RS23430 6239b4869a6582f330a86db68bdc196a 163 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 24 155 3.0E-36 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 AL504_RS23430 6239b4869a6582f330a86db68bdc196a 163 Pfam PF01029 NusB family 25 153 6.9E-29 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL504_RS23430 6239b4869a6582f330a86db68bdc196a 163 SUPERFAMILY SSF48013 22 157 1.57E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL504_RS23430 6239b4869a6582f330a86db68bdc196a 163 Gene3D G3DSA:1.10.940.10 19 160 1.6E-34 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL504_RS05635 0646aa9c72a44bbbb959bb95159cd0df 513 Pfam PF00324 Amino acid permease 26 478 5.2E-131 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AL504_RS05635 0646aa9c72a44bbbb959bb95159cd0df 513 PIRSF PIRSF006060 8 496 3.3E-78 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL504_RS21060 2162442ffb24487f1ff58efe0a0f2283 200 SUPERFAMILY SSF53697 5 194 5.19E-55 T 28-03-2018 AL504_RS21060 2162442ffb24487f1ff58efe0a0f2283 200 Pfam PF13580 SIS domain 14 149 3.2E-33 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS21060 2162442ffb24487f1ff58efe0a0f2283 200 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 6 195 35.997 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL504_RS21060 2162442ffb24487f1ff58efe0a0f2283 200 Gene3D G3DSA:3.40.50.10490 5 198 1.2E-38 T 28-03-2018 AL504_RS02880 7031dbf18b06f5816aec5d11ceab2f20 393 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 95 282 1.0E-4 T 28-03-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 AL504_RS11590 b57a9e413c5b81486599431447718046 189 Pfam PF05233 PHB accumulation regulatory domain 76 114 9.4E-19 T 28-03-2018 IPR007897 PHB accumulation regulatory AL504_RS11590 b57a9e413c5b81486599431447718046 189 Pfam PF05233 PHB accumulation regulatory domain 126 165 1.4E-14 T 28-03-2018 IPR007897 PHB accumulation regulatory AL504_RS11590 b57a9e413c5b81486599431447718046 189 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 11 117 6.9E-46 T 28-03-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 AL504_RS11590 b57a9e413c5b81486599431447718046 189 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 12 71 1.4E-30 T 28-03-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AL504_RS21870 16a374852ab9403a10885dbf1199a792 237 PIRSF PIRSF006293 4 236 1.2E-65 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL504_RS21870 16a374852ab9403a10885dbf1199a792 237 Pfam PF06508 Queuosine biosynthesis protein QueC 7 231 9.4E-69 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL504_RS21870 16a374852ab9403a10885dbf1199a792 237 Gene3D G3DSA:3.40.50.620 5 237 6.2E-48 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS21870 16a374852ab9403a10885dbf1199a792 237 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 224 3.9E-57 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL504_RS21870 16a374852ab9403a10885dbf1199a792 237 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 237 50.731 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL504_RS21870 16a374852ab9403a10885dbf1199a792 237 SUPERFAMILY SSF52402 7 231 4.85E-53 T 28-03-2018 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 74 99 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 149 167 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 167 186 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 479 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 267 283 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 297 316 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 488 505 2.5E-66 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 53 577 2.4E-127 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 Pfam PF01019 Gamma-glutamyltranspeptidase 67 580 1.0E-153 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS14155 f985c8d32baeefcfd67bd3c4708df7ea 585 SUPERFAMILY SSF56235 44 584 3.09E-168 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS05000 f925adb30d28805aeb7f2dcc3577c133 283 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 272 1.3E-42 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS05000 f925adb30d28805aeb7f2dcc3577c133 283 Gene3D G3DSA:1.10.3470.10 1 277 2.5E-45 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS04110 bf844444c07dc69bf47fc4794212ca31 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 1.0E-27 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS04110 bf844444c07dc69bf47fc4794212ca31 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.0E-27 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS04110 bf844444c07dc69bf47fc4794212ca31 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.0E-27 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS04110 bf844444c07dc69bf47fc4794212ca31 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.0E-27 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS04110 bf844444c07dc69bf47fc4794212ca31 402 Pfam PF00482 Type II secretion system (T2SS), protein F 69 191 4.6E-32 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS04110 bf844444c07dc69bf47fc4794212ca31 402 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 7.0E-28 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS04110 bf844444c07dc69bf47fc4794212ca31 402 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 2.6E-153 T 28-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AL504_RS03430 d19142e58fd240aaadbdcacecc6ebc02 526 Pfam PF00171 Aldehyde dehydrogenase family 21 469 2.8E-45 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS03430 d19142e58fd240aaadbdcacecc6ebc02 526 Gene3D G3DSA:3.40.309.10 280 457 2.4E-18 T 28-03-2018 AL504_RS03430 d19142e58fd240aaadbdcacecc6ebc02 526 SUPERFAMILY SSF53720 20 519 3.01E-98 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS03430 d19142e58fd240aaadbdcacecc6ebc02 526 Gene3D G3DSA:3.40.605.10 3 279 1.6E-52 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS22415 db6543212478d25facd697bc8cac241d 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 307 2.3E-53 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS22415 db6543212478d25facd697bc8cac241d 319 PIRSF PIRSF017082 1 319 1.0E-101 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS22415 db6543212478d25facd697bc8cac241d 319 Gene3D G3DSA:3.40.190.10 129 292 9.9E-10 T 28-03-2018 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 4.0E-42 T 28-03-2018 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 331 347 4.0E-42 T 28-03-2018 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.0E-42 T 28-03-2018 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 331 4.0E-42 T 28-03-2018 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 4.0E-42 T 28-03-2018 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 4.0E-42 T 28-03-2018 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 Gene3D G3DSA:3.50.50.60 1 390 1.1E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 Pfam PF01494 FAD binding domain 4 345 2.7E-62 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 SUPERFAMILY SSF51905 4 181 1.05E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01350 0ffe1876380359c66e8a2301629c6a71 504 SUPERFAMILY SSF51905 267 358 1.05E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS05220 8bf72b2c76a00bf6b6a9094138b5cc70 271 Gene3D G3DSA:3.40.190.10 129 257 9.9E-6 T 28-03-2018 AL504_RS05220 8bf72b2c76a00bf6b6a9094138b5cc70 271 SMART SM00062 35 256 0.0033 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS05220 8bf72b2c76a00bf6b6a9094138b5cc70 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 252 1.2E-14 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS05220 8bf72b2c76a00bf6b6a9094138b5cc70 271 Gene3D G3DSA:3.40.190.10 30 128 2.8E-8 T 28-03-2018 AL504_RS05220 8bf72b2c76a00bf6b6a9094138b5cc70 271 SUPERFAMILY SSF53850 27 253 3.88E-18 T 28-03-2018 AL504_RS22640 f24be41ab2ec3a0006bda3a573e9f97d 46 SUPERFAMILY SSF57840 1 41 8.37E-15 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS22640 f24be41ab2ec3a0006bda3a573e9f97d 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS22640 f24be41ab2ec3a0006bda3a573e9f97d 46 Pfam PF00444 Ribosomal protein L36 1 41 1.5E-18 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS22640 f24be41ab2ec3a0006bda3a573e9f97d 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.4E-9 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS22640 f24be41ab2ec3a0006bda3a573e9f97d 46 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 3.0E-4 T 28-03-2018 AL504_RS22640 f24be41ab2ec3a0006bda3a573e9f97d 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 18.124 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS15945 044128e1dbfbed7db0ef73f25af8c4cf 221 SUPERFAMILY SSF51391 6 208 3.53E-54 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS15945 044128e1dbfbed7db0ef73f25af8c4cf 221 Gene3D G3DSA:3.20.20.70 1 212 1.0E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS15945 044128e1dbfbed7db0ef73f25af8c4cf 221 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 214 23.918 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS15945 044128e1dbfbed7db0ef73f25af8c4cf 221 Pfam PF02581 Thiamine monophosphate synthase 10 195 3.8E-51 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS15945 044128e1dbfbed7db0ef73f25af8c4cf 221 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 207 3.1E-47 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL504_RS07940 f19998c19e5ef16b9ab543dc39e2ef53 319 Pfam PF01619 Proline dehydrogenase 47 299 9.6E-18 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AL504_RS07940 f19998c19e5ef16b9ab543dc39e2ef53 319 SUPERFAMILY SSF51730 43 309 1.06E-45 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS07940 f19998c19e5ef16b9ab543dc39e2ef53 319 Gene3D G3DSA:3.20.20.220 3 316 1.3E-49 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL504_RS26295 714fa1326429d22f3419ae0d4f39f82c 168 SUPERFAMILY SSF88946 10 92 1.57E-9 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26295 714fa1326429d22f3419ae0d4f39f82c 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 162 1.2E-23 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26295 714fa1326429d22f3419ae0d4f39f82c 168 Pfam PF04542 Sigma-70 region 2 13 74 1.9E-7 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26295 714fa1326429d22f3419ae0d4f39f82c 168 SUPERFAMILY SSF88659 86 165 5.05E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26295 714fa1326429d22f3419ae0d4f39f82c 168 Pfam PF08281 Sigma-70, region 4 106 158 4.5E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26295 714fa1326429d22f3419ae0d4f39f82c 168 Gene3D G3DSA:1.10.10.10 72 165 5.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26295 714fa1326429d22f3419ae0d4f39f82c 168 Gene3D G3DSA:1.10.1740.10 4 71 8.6E-11 T 28-03-2018 AL504_RS13415 e2b24b131927a0b477eb1085a7d34b3b 199 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 6.1E-28 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS13415 e2b24b131927a0b477eb1085a7d34b3b 199 SUPERFAMILY SSF55729 5 172 5.12E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS13415 e2b24b131927a0b477eb1085a7d34b3b 199 Gene3D G3DSA:3.40.630.30 1 194 6.8E-27 T 28-03-2018 AL504_RS30550 c6eff4b2110e4ed57ac1526dc70d8845 302 Gene3D G3DSA:2.40.50.100 145 297 1.6E-4 T 28-03-2018 AL504_RS30550 c6eff4b2110e4ed57ac1526dc70d8845 302 Gene3D G3DSA:2.40.50.100 42 114 3.1E-17 T 28-03-2018 AL504_RS30550 c6eff4b2110e4ed57ac1526dc70d8845 302 Pfam PF13533 Biotin-lipoyl like 43 91 2.5E-16 T 28-03-2018 AL504_RS30550 c6eff4b2110e4ed57ac1526dc70d8845 302 Pfam PF13437 HlyD family secretion protein 151 235 3.3E-8 T 28-03-2018 AL504_RS30550 c6eff4b2110e4ed57ac1526dc70d8845 302 SUPERFAMILY SSF111369 38 177 3.66E-21 T 28-03-2018 AL504_RS15120 0b55855b0a5a832b9ba58d9dd50b3e7f 321 Gene3D G3DSA:1.10.3470.10 12 302 2.4E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS15120 0b55855b0a5a832b9ba58d9dd50b3e7f 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 295 1.6E-32 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 SUPERFAMILY SSF53850 87 293 1.15E-27 T 28-03-2018 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 Gene3D G3DSA:3.40.190.10 91 173 6.7E-12 T 28-03-2018 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 Gene3D G3DSA:3.40.190.10 174 261 1.8E-12 T 28-03-2018 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 Gene3D G3DSA:1.10.10.10 2 81 4.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 SUPERFAMILY SSF46785 3 79 2.27E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06780 0a005a65d728701b3ae0a8f6a56da4d3 300 Pfam PF03466 LysR substrate binding domain 87 291 5.7E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS26445 43fa4d7d04b64ac9d531ac06d950b40c 200 Pfam PF01985 CRS1 / YhbY (CRM) domain 6 89 3.3E-16 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL504_RS26445 43fa4d7d04b64ac9d531ac06d950b40c 200 Gene3D G3DSA:3.30.110.60 5 97 1.1E-18 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL504_RS26445 43fa4d7d04b64ac9d531ac06d950b40c 200 SUPERFAMILY SSF75471 5 91 1.83E-23 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL504_RS26445 43fa4d7d04b64ac9d531ac06d950b40c 200 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 90 8.0E-36 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL504_RS26445 43fa4d7d04b64ac9d531ac06d950b40c 200 SMART SM01103 6 89 2.1E-35 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL504_RS07870 410578bf5617bbd26cf28ffa86860ba7 237 Gene3D G3DSA:1.10.3720.10 34 234 8.0E-21 T 28-03-2018 AL504_RS07870 410578bf5617bbd26cf28ffa86860ba7 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 225 2.0E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07870 410578bf5617bbd26cf28ffa86860ba7 237 SUPERFAMILY SSF161098 39 220 2.09E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07985 e76f67023dfb111b11a71da7fa92270d 85 Pfam PF00550 Phosphopantetheine attachment site 10 75 5.6E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS07985 e76f67023dfb111b11a71da7fa92270d 85 SUPERFAMILY SSF47336 2 83 3.53E-19 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS07985 e76f67023dfb111b11a71da7fa92270d 85 Gene3D G3DSA:1.10.1200.10 1 83 4.1E-19 T 28-03-2018 AL504_RS24915 9ef9d1263a856fb2dff2b7c0f5396917 295 SUPERFAMILY SSF46785 9 119 1.52E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24915 9ef9d1263a856fb2dff2b7c0f5396917 295 SUPERFAMILY SSF53850 97 290 4.34E-29 T 28-03-2018 AL504_RS24915 9ef9d1263a856fb2dff2b7c0f5396917 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 8.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS24915 9ef9d1263a856fb2dff2b7c0f5396917 295 Gene3D G3DSA:3.40.190.10 185 264 9.3E-12 T 28-03-2018 AL504_RS24915 9ef9d1263a856fb2dff2b7c0f5396917 295 Pfam PF03466 LysR substrate binding domain 96 287 3.9E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS24915 9ef9d1263a856fb2dff2b7c0f5396917 295 Gene3D G3DSA:3.40.190.10 100 184 9.6E-19 T 28-03-2018 AL504_RS24915 9ef9d1263a856fb2dff2b7c0f5396917 295 Gene3D G3DSA:1.10.10.10 5 97 4.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS03665 0c89bb9e11eb30cd7cd80ad8173cf979 459 SUPERFAMILY SSF53720 2 454 7.85E-162 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS03665 0c89bb9e11eb30cd7cd80ad8173cf979 459 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS03665 0c89bb9e11eb30cd7cd80ad8173cf979 459 Gene3D G3DSA:3.40.309.10 245 438 3.8E-73 T 28-03-2018 AL504_RS03665 0c89bb9e11eb30cd7cd80ad8173cf979 459 Gene3D G3DSA:3.40.605.10 1 244 4.6E-90 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS03665 0c89bb9e11eb30cd7cd80ad8173cf979 459 Pfam PF00171 Aldehyde dehydrogenase family 2 452 4.1E-165 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS28585 36f779859874e09fdfc4ae82195fdcb0 569 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 240 529 3.2E-18 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AL504_RS28585 36f779859874e09fdfc4ae82195fdcb0 569 Pfam PF08479 POTRA domain, ShlB-type 75 147 6.6E-18 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AL504_RS28585 36f779859874e09fdfc4ae82195fdcb0 569 Gene3D G3DSA:3.10.20.310 75 147 7.5E-14 T 28-03-2018 AL504_RS28585 36f779859874e09fdfc4ae82195fdcb0 569 Gene3D G3DSA:2.40.160.50 177 563 4.6E-35 T 28-03-2018 AL504_RS03700 f123ec9519472785aa9117f892bfda46 280 SUPERFAMILY SSF51556 18 278 3.06E-58 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS03700 f123ec9519472785aa9117f892bfda46 280 Gene3D G3DSA:3.20.20.140 8 280 2.7E-39 T 28-03-2018 AL504_RS03700 f123ec9519472785aa9117f892bfda46 280 Pfam PF04909 Amidohydrolase 24 278 8.3E-25 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS05965 6e881066b2a861dc0c24b49747bce5ed 492 Gene3D G3DSA:1.20.1600.10 22 471 1.7E-97 T 28-03-2018 AL504_RS05965 6e881066b2a861dc0c24b49747bce5ed 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 466 1.5E-121 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS05965 6e881066b2a861dc0c24b49747bce5ed 492 SUPERFAMILY SSF56954 6 468 1.57E-108 T 28-03-2018 AL504_RS05965 6e881066b2a861dc0c24b49747bce5ed 492 Pfam PF02321 Outer membrane efflux protein 66 255 2.7E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS05965 6e881066b2a861dc0c24b49747bce5ed 492 Pfam PF02321 Outer membrane efflux protein 282 464 9.2E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS17190 42afc7c2f91b35a4ecb4be110eaaae49 180 SUPERFAMILY SSF52833 10 167 1.33E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS17190 42afc7c2f91b35a4ecb4be110eaaae49 180 Pfam PF00578 AhpC/TSA family 46 157 1.9E-19 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL504_RS17190 42afc7c2f91b35a4ecb4be110eaaae49 180 Gene3D G3DSA:3.40.30.10 15 180 4.1E-28 T 28-03-2018 AL504_RS20830 37e23cc6a24bde636d392fb26b59893e 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 2.4E-13 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS20830 37e23cc6a24bde636d392fb26b59893e 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 2.4E-13 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS20830 37e23cc6a24bde636d392fb26b59893e 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 2.4E-13 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS20830 37e23cc6a24bde636d392fb26b59893e 112 Pfam PF01022 Bacterial regulatory protein, arsR family 30 74 2.1E-12 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS20830 37e23cc6a24bde636d392fb26b59893e 112 Gene3D G3DSA:1.10.10.10 3 98 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20830 37e23cc6a24bde636d392fb26b59893e 112 SMART SM00418 22 100 6.0E-27 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS20830 37e23cc6a24bde636d392fb26b59893e 112 SUPERFAMILY SSF46785 18 103 4.26E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25120 b75f89e782ebefaa145af0d87fd633ea 436 Pfam PF00939 Sodium:sulfate symporter transmembrane region 15 434 3.2E-20 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL504_RS10670 80cbde1a646aa0063f4cd2b53b868e54 270 SUPERFAMILY SSF69618 11 241 2.75E-36 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10670 80cbde1a646aa0063f4cd2b53b868e54 270 Gene3D G3DSA:3.40.50.10090 10 136 1.3E-24 T 28-03-2018 AL504_RS10670 80cbde1a646aa0063f4cd2b53b868e54 270 Pfam PF02602 Uroporphyrinogen-III synthase HemD 23 239 5.2E-28 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL504_RS10670 80cbde1a646aa0063f4cd2b53b868e54 270 Gene3D G3DSA:3.40.50.10090 141 270 3.4E-17 T 28-03-2018 AL504_RS27000 64192a7af761aa95df0809e2a6d8a9ac 263 Gene3D G3DSA:1.10.12.10 221 263 3.3E-9 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS27000 64192a7af761aa95df0809e2a6d8a9ac 263 SUPERFAMILY SSF52096 7 262 1.33E-63 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS27000 64192a7af761aa95df0809e2a6d8a9ac 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 261 2.3E-40 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS27000 64192a7af761aa95df0809e2a6d8a9ac 263 Gene3D G3DSA:3.90.226.10 1 220 1.2E-53 T 28-03-2018 AL504_RS03370 8b3f5b8b4f091b8dc208e07e5ab2c3b9 358 Gene3D G3DSA:1.10.3470.10 23 358 1.6E-72 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS03370 8b3f5b8b4f091b8dc208e07e5ab2c3b9 358 Pfam PF01032 FecCD transport family 39 353 1.8E-80 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS03370 8b3f5b8b4f091b8dc208e07e5ab2c3b9 358 SUPERFAMILY SSF81345 21 353 7.06E-75 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS08890 3ba52038f56d73bf873871690920157f 229 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 114 212 9.6E-19 T 28-03-2018 IPR006528 Phage head morphogenesis domain AL504_RS08890 3ba52038f56d73bf873871690920157f 229 Pfam PF04233 Phage Mu protein F like protein 111 212 5.1E-21 T 28-03-2018 IPR006528 Phage head morphogenesis domain AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 SUPERFAMILY SSF51230 75 150 1.07E-25 T 28-03-2018 IPR011053 Single hybrid motif AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 Gene3D G3DSA:2.40.50.100 4 151 2.3E-21 T 28-03-2018 AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 150 1.3E-55 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 Pfam PF00364 Biotin-requiring enzyme 77 150 3.2E-25 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 9.0E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 9.0E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 9.0E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL504_RS15795 89f7dddafb7b43713ff86dfe7a5589f4 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL504_RS02970 d009e79eedd2f631fa5d4d760e868805 473 SUPERFAMILY SSF56176 8 221 2.8E-72 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL504_RS02970 d009e79eedd2f631fa5d4d760e868805 473 Gene3D G3DSA:3.30.43.10 1 99 8.6E-23 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL504_RS02970 d009e79eedd2f631fa5d4d760e868805 473 SUPERFAMILY SSF55103 195 471 2.45E-55 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL504_RS02970 d009e79eedd2f631fa5d4d760e868805 473 Gene3D G3DSA:1.10.45.10 432 471 1.5E-15 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL504_RS02970 d009e79eedd2f631fa5d4d760e868805 473 Gene3D G3DSA:3.30.465.10 100 220 2.6E-39 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL504_RS02970 d009e79eedd2f631fa5d4d760e868805 473 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 471 5.0E-55 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL504_RS02970 d009e79eedd2f631fa5d4d760e868805 473 Pfam PF01565 FAD binding domain 45 181 1.1E-35 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL504_RS03595 3a13e4998764fbc5ae032dccd909396f 382 SUPERFAMILY SSF161098 245 363 3.68E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03595 3a13e4998764fbc5ae032dccd909396f 382 SUPERFAMILY SSF161098 76 143 3.68E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03595 3a13e4998764fbc5ae032dccd909396f 382 Gene3D G3DSA:1.10.3720.10 12 382 1.2E-43 T 28-03-2018 AL504_RS03595 3a13e4998764fbc5ae032dccd909396f 382 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 247 377 5.6E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03595 3a13e4998764fbc5ae032dccd909396f 382 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 75 138 4.7E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS18180 f364f96d9cd15fb02e1bb213b710ff97 378 Pfam PF14279 HNH endonuclease 4 57 1.8E-11 T 28-03-2018 IPR029471 HNH endonuclease 5 AL504_RS18180 f364f96d9cd15fb02e1bb213b710ff97 378 Gene3D G3DSA:3.40.1800.10 1 55 9.8E-4 T 28-03-2018 AL504_RS10890 c3bdb7ead94cdc3d0f2870c9143710e4 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.9E-33 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10890 c3bdb7ead94cdc3d0f2870c9143710e4 124 Gene3D G3DSA:3.30.70.60 1 100 1.7E-31 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL504_RS10890 c3bdb7ead94cdc3d0f2870c9143710e4 124 SUPERFAMILY SSF54995 1 103 6.15E-37 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10890 c3bdb7ead94cdc3d0f2870c9143710e4 124 Pfam PF01250 Ribosomal protein S6 3 91 1.7E-27 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS10890 c3bdb7ead94cdc3d0f2870c9143710e4 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.908 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL504_RS09280 94cff7af92b28aefe437c11432715b78 313 SUPERFAMILY SSF46689 5 77 2.69E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS09280 94cff7af92b28aefe437c11432715b78 313 Pfam PF01380 SIS domain 134 241 3.8E-12 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL504_RS09280 94cff7af92b28aefe437c11432715b78 313 SUPERFAMILY SSF53697 110 241 6.07E-17 T 28-03-2018 AL504_RS09280 94cff7af92b28aefe437c11432715b78 313 Gene3D G3DSA:3.40.50.10490 105 299 8.8E-20 T 28-03-2018 AL504_RS09280 94cff7af92b28aefe437c11432715b78 313 Gene3D G3DSA:1.10.10.10 3 79 2.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01115 0bfae486c6e8d950bb5476e5c095e9e6 127 Pfam PF04134 Protein of unknown function, DUF393 9 114 6.6E-10 T 28-03-2018 IPR007263 Protein of unknown function DUF393 AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 Gene3D G3DSA:3.40.640.10 185 311 2.5E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 Gene3D G3DSA:3.90.1150.10 1 184 1.3E-48 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 Gene3D G3DSA:3.90.1150.10 312 425 1.8E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 104.519 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 SUPERFAMILY SSF53383 2 423 1.69E-132 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 5.0E-186 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS15950 dd7d0a18162a799d2be54280942a2c62 425 Pfam PF00202 Aminotransferase class-III 32 395 2.9E-76 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS25155 7bf240486726f2fc574dfc72291ebedc 155 Pfam PF05425 Copper resistance protein D 46 154 6.8E-12 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 AL504_RS24685 8bb90bcb3ab4dad8144e943ad909bc12 200 Gene3D G3DSA:2.60.40.10 23 189 0.0048 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS23020 949b2b02bf789bacb3096db3dc68af64 491 Pfam PF07364 Metallopeptidase family M81 2 289 1.4E-87 T 28-03-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal AL504_RS23020 949b2b02bf789bacb3096db3dc68af64 491 Gene3D G3DSA:3.40.50.2300 77 373 0.024 T 28-03-2018 AL504_RS23020 949b2b02bf789bacb3096db3dc68af64 491 PIRSF PIRSF012702 1 491 4.3E-167 T 28-03-2018 IPR009197 Microcystin LR degradation protein MlrC AL504_RS23020 949b2b02bf789bacb3096db3dc68af64 491 Pfam PF07171 MlrC C-terminus 299 480 8.1E-51 T 28-03-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal AL504_RS11985 f9b953dd8ffc168fd0bb5ca41bb6fc5c 295 SUPERFAMILY SSF103481 44 140 1.44E-14 T 28-03-2018 AL504_RS11985 f9b953dd8ffc168fd0bb5ca41bb6fc5c 295 Pfam PF00892 EamA-like transporter family 150 286 3.3E-26 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS11985 f9b953dd8ffc168fd0bb5ca41bb6fc5c 295 Pfam PF00892 EamA-like transporter family 10 139 1.1E-22 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS11985 f9b953dd8ffc168fd0bb5ca41bb6fc5c 295 SUPERFAMILY SSF103481 186 288 7.72E-16 T 28-03-2018 AL504_RS08490 8044fb8b39e598e633dcaa7cd97c1d49 106 Gene3D G3DSA:2.60.120.10 2 97 4.3E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS08490 8044fb8b39e598e633dcaa7cd97c1d49 106 SUPERFAMILY SSF51182 3 91 1.94E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS08490 8044fb8b39e598e633dcaa7cd97c1d49 106 Pfam PF07883 Cupin domain 22 91 2.0E-7 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS13475 3f47864b4ee23c06aad7cfa092d3626f 139 Pfam PF01475 Ferric uptake regulator family 10 129 5.4E-47 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL504_RS13475 3f47864b4ee23c06aad7cfa092d3626f 139 SUPERFAMILY SSF46785 5 133 7.32E-43 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13475 3f47864b4ee23c06aad7cfa092d3626f 139 Gene3D G3DSA:1.10.10.10 3 89 5.5E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01600 f59f2c1e2d32339ad9798650fd2ebb16 344 Pfam PF13478 XdhC Rossmann domain 165 307 1.5E-35 T 28-03-2018 IPR027051 XdhC Rossmann domain AL504_RS01600 f59f2c1e2d32339ad9798650fd2ebb16 344 Pfam PF02625 XdhC and CoxI family 15 83 1.6E-22 T 28-03-2018 IPR003777 XdhC- CoxI AL504_RS01600 f59f2c1e2d32339ad9798650fd2ebb16 344 Gene3D G3DSA:3.40.50.20 157 330 0.0015 T 28-03-2018 AL504_RS22720 604b137861c9dc7ea2839054c11d433c 557 SUPERFAMILY SSF48557 20 545 1.73E-128 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS22720 604b137861c9dc7ea2839054c11d433c 557 Gene3D G3DSA:1.10.275.10 12 221 1.1E-53 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS22720 604b137861c9dc7ea2839054c11d433c 557 Gene3D G3DSA:1.20.200.10 224 549 4.7E-79 T 28-03-2018 AL504_RS22720 604b137861c9dc7ea2839054c11d433c 557 Pfam PF00221 Aromatic amino acid lyase 28 517 2.8E-124 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL504_RS03525 a37613a05717cdf8bd25477651603d5e 338 Pfam PF13531 Bacterial extracellular solute-binding protein 39 287 2.7E-35 T 28-03-2018 AL504_RS03525 a37613a05717cdf8bd25477651603d5e 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 150 158 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AL504_RS03525 a37613a05717cdf8bd25477651603d5e 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 19 333 4.4E-122 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AL504_RS03525 a37613a05717cdf8bd25477651603d5e 338 Gene3D G3DSA:3.40.190.10 132 335 7.0E-35 T 28-03-2018 AL504_RS03525 a37613a05717cdf8bd25477651603d5e 338 SUPERFAMILY SSF53850 26 333 2.45E-71 T 28-03-2018 AL504_RS03525 a37613a05717cdf8bd25477651603d5e 338 Gene3D G3DSA:3.40.190.10 25 131 1.5E-21 T 28-03-2018 AL504_RS10230 c20e2511f5e2acae3bb83fd11c583650 325 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 27 321 4.3E-113 T 28-03-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 AL504_RS10230 c20e2511f5e2acae3bb83fd11c583650 325 PIRSF PIRSF018005 3 325 4.8E-104 T 28-03-2018 IPR017804 Methyltransferase EgtD-like AL504_RS10230 c20e2511f5e2acae3bb83fd11c583650 325 Gene3D G3DSA:3.40.50.150 11 325 8.8E-21 T 28-03-2018 AL504_RS10230 c20e2511f5e2acae3bb83fd11c583650 325 SUPERFAMILY SSF53335 42 231 2.27E-12 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS10230 c20e2511f5e2acae3bb83fd11c583650 325 SUPERFAMILY SSF53335 288 324 2.27E-12 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS10230 c20e2511f5e2acae3bb83fd11c583650 325 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 28 324 5.1E-99 T 28-03-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent AL504_RS16510 f3f1673682fe1c893c3c2558ad679433 157 Pfam PF04214 Protein of unknown function, DUF 60 127 1.8E-29 T 28-03-2018 IPR007332 Protein of unknown function DUF411 AL504_RS16510 f3f1673682fe1c893c3c2558ad679433 157 Gene3D G3DSA:3.40.30.10 34 114 2.3E-4 T 28-03-2018 AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 Gene3D G3DSA:1.10.10.60 4 59 4.7E-16 T 28-03-2018 AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 Gene3D G3DSA:1.10.357.10 60 196 2.5E-26 T 28-03-2018 AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 SUPERFAMILY SSF46689 5 86 1.08E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 SUPERFAMILY SSF48498 80 195 2.97E-22 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.5E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.5E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 194 9.1E-11 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS06745 569bde092028e7f364b2daf5f9eb5a2e 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 5.0E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS11580 fd4833029e0d0db1a2025bed2f008425 117 Pfam PF13473 Cupredoxin-like domain 12 113 4.9E-24 T 28-03-2018 IPR028096 EfeO-type cupredoxin-like domain AL504_RS11580 fd4833029e0d0db1a2025bed2f008425 117 Gene3D G3DSA:2.60.40.420 19 114 1.4E-5 T 28-03-2018 IPR008972 Cupredoxin AL504_RS11580 fd4833029e0d0db1a2025bed2f008425 117 SUPERFAMILY SSF49503 16 114 2.09E-14 T 28-03-2018 IPR008972 Cupredoxin AL504_RS18700 b1278cd0c772c3503ae83be694514c28 535 SUPERFAMILY SSF52096 279 535 7.66E-88 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS18700 b1278cd0c772c3503ae83be694514c28 535 Pfam PF01039 Carboxyl transferase domain 48 525 2.2E-152 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL504_RS18700 b1278cd0c772c3503ae83be694514c28 535 SUPERFAMILY SSF52096 22 270 4.82E-70 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS18700 b1278cd0c772c3503ae83be694514c28 535 Gene3D G3DSA:3.90.226.10 276 531 2.1E-72 T 28-03-2018 AL504_RS18700 b1278cd0c772c3503ae83be694514c28 535 Gene3D G3DSA:3.90.226.10 9 275 2.6E-67 T 28-03-2018 AL504_RS27380 b87c569ab9946182ed8c9dfc8f13dba4 338 PRINTS PR00184 Neisseria sp. porin signature 296 320 3.0E-6 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS27380 b87c569ab9946182ed8c9dfc8f13dba4 338 PRINTS PR00184 Neisseria sp. porin signature 59 84 3.0E-6 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS27380 b87c569ab9946182ed8c9dfc8f13dba4 338 SUPERFAMILY SSF56935 29 338 2.2E-68 T 28-03-2018 AL504_RS27380 b87c569ab9946182ed8c9dfc8f13dba4 338 Gene3D G3DSA:2.40.160.10 13 338 2.3E-65 T 28-03-2018 AL504_RS27380 b87c569ab9946182ed8c9dfc8f13dba4 338 Pfam PF13609 Gram-negative porin 14 321 1.9E-54 T 28-03-2018 AL504_RS20220 fa6ab4ca26f392928b90573df9551c04 302 Pfam PF00487 Fatty acid desaturase 42 259 2.7E-20 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AL504_RS11025 54653277d722530c3b6e7e5317a46f64 208 SUPERFAMILY SSF102405 10 188 5.49E-57 T 28-03-2018 AL504_RS11025 54653277d722530c3b6e7e5317a46f64 208 Gene3D G3DSA:3.40.50.450 1 205 1.4E-62 T 28-03-2018 AL504_RS11025 54653277d722530c3b6e7e5317a46f64 208 Pfam PF03641 Possible lysine decarboxylase 59 189 7.2E-33 T 28-03-2018 IPR031100 LOG family AL504_RS11025 54653277d722530c3b6e7e5317a46f64 208 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 17 190 1.1E-43 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AL504_RS00440 a0faaa1a0fe30e2578843f118de4296b 350 SUPERFAMILY SSF74653 70 174 6.02E-19 T 28-03-2018 AL504_RS00440 a0faaa1a0fe30e2578843f118de4296b 350 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 96 171 2.2E-12 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS00440 a0faaa1a0fe30e2578843f118de4296b 350 Gene3D G3DSA:3.30.1150.10 64 182 1.3E-21 T 28-03-2018 AL504_RS00440 a0faaa1a0fe30e2578843f118de4296b 350 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 95 170 4.7E-10 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS24035 113c6cd28974569f3387cf51fdfba954 401 Gene3D G3DSA:3.40.50.10540 3 401 5.4E-150 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS24035 113c6cd28974569f3387cf51fdfba954 401 SUPERFAMILY SSF89796 7 398 1.31E-137 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS24035 113c6cd28974569f3387cf51fdfba954 401 Pfam PF02515 CoA-transferase family III 9 384 1.6E-130 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS25440 fa7d5907b9f9de74ff129d117b29c542 185 PIRSF PIRSF000216 22 185 2.2E-49 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25440 fa7d5907b9f9de74ff129d117b29c542 185 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 39 180 1.8E-42 T 28-03-2018 AL504_RS25440 fa7d5907b9f9de74ff129d117b29c542 185 SUPERFAMILY SSF52833 34 181 4.14E-47 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25440 fa7d5907b9f9de74ff129d117b29c542 185 Gene3D G3DSA:3.40.30.10 99 185 9.8E-14 T 28-03-2018 AL504_RS29725 fff75529081f63fb68805503952420c7 315 Pfam PF04261 Dyp-type peroxidase family 9 305 7.0E-92 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL504_RS29725 fff75529081f63fb68805503952420c7 315 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 9 305 2.4E-84 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL504_RS29725 fff75529081f63fb68805503952420c7 315 SUPERFAMILY SSF54909 8 310 1.97E-104 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS04120 0bcce019555c7c6b56a39aaccc0e653f 200 Pfam PF04612 Type II secretion system (T2SS), protein M 29 173 4.3E-17 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL504_RS04120 0bcce019555c7c6b56a39aaccc0e653f 200 Gene3D G3DSA:3.30.1360.100 107 177 1.3E-4 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AL504_RS24290 73f9c311729ba70a2efe78ee17e18547 326 PIRSF PIRSF018266 7 325 5.7E-69 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS24290 73f9c311729ba70a2efe78ee17e18547 326 Pfam PF16220 Domain of unknown function (DUF4880) 19 56 1.9E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS24290 73f9c311729ba70a2efe78ee17e18547 326 Pfam PF04773 FecR protein 125 214 1.8E-13 T 28-03-2018 IPR006860 FecR protein AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 Gene3D G3DSA:3.30.2090.10 718 806 2.1E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 Gene3D G3DSA:1.20.1640.10 286 509 2.2E-45 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82693 38 131 2.88E-25 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 Gene3D G3DSA:3.30.70.1430 38 140 6.0E-26 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 Gene3D G3DSA:1.20.1640.10 813 1026 2.0E-33 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82714 182 270 6.93E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 2.4E-104 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82866 295 496 4.19E-50 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82714 719 805 8.76E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82693 564 667 2.09E-29 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82693 273 329 4.01E-21 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82693 142 181 4.01E-21 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 Gene3D G3DSA:3.30.70.1430 566 665 7.1E-22 T 28-03-2018 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1027 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 Gene3D G3DSA:3.30.2090.10 179 274 3.8E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL504_RS12635 08230d989b7c194a8ec3e2c8687f8749 1048 SUPERFAMILY SSF82866 804 1025 1.7E-41 T 28-03-2018 AL504_RS30205 2a6a34ba191f98ad9cf96d92b15c1650 318 Gene3D G3DSA:3.40.190.10 47 286 2.2E-4 T 28-03-2018 AL504_RS30205 2a6a34ba191f98ad9cf96d92b15c1650 318 SUPERFAMILY SSF53850 108 279 3.58E-5 T 28-03-2018 AL504_RS30205 2a6a34ba191f98ad9cf96d92b15c1650 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 41 313 1.5E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS30205 2a6a34ba191f98ad9cf96d92b15c1650 318 PIRSF PIRSF017082 1 318 6.6E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03545 de8858927c3b45d2b054220df7f72326 517 SUPERFAMILY SSF53850 32 497 2.72E-127 T 28-03-2018 AL504_RS03545 de8858927c3b45d2b054220df7f72326 517 PIRSF PIRSF002741 1 505 5.6E-107 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS03545 de8858927c3b45d2b054220df7f72326 517 Gene3D G3DSA:3.10.105.10 286 483 6.4E-54 T 28-03-2018 AL504_RS03545 de8858927c3b45d2b054220df7f72326 517 Gene3D G3DSA:3.40.190.10 154 285 2.1E-37 T 28-03-2018 AL504_RS03545 de8858927c3b45d2b054220df7f72326 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 429 1.5E-93 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS03545 de8858927c3b45d2b054220df7f72326 517 Gene3D G3DSA:3.90.76.10 60 153 6.7E-26 T 28-03-2018 AL504_RS10290 dd1c2cff5dbce1b30b0d1000274fb67c 302 Pfam PF00892 EamA-like transporter family 165 289 1.0E-6 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS10290 dd1c2cff5dbce1b30b0d1000274fb67c 302 Pfam PF00892 EamA-like transporter family 11 141 1.6E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS10290 dd1c2cff5dbce1b30b0d1000274fb67c 302 SUPERFAMILY SSF103481 194 291 1.83E-7 T 28-03-2018 AL504_RS10290 dd1c2cff5dbce1b30b0d1000274fb67c 302 SUPERFAMILY SSF103481 47 144 7.85E-9 T 28-03-2018 AL504_RS02020 3650376c74757768a44e03b458c12850 213 Pfam PF13360 PQQ-like domain 73 207 2.4E-4 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL504_RS02020 3650376c74757768a44e03b458c12850 213 Gene3D G3DSA:2.140.10.10 7 78 1.3E-8 T 28-03-2018 AL504_RS02020 3650376c74757768a44e03b458c12850 213 Gene3D G3DSA:2.130.10.10 79 212 1.0E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS02020 3650376c74757768a44e03b458c12850 213 SUPERFAMILY SSF50969 18 209 4.0E-24 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL504_RS11800 a9cf4e63cada52fed7d4867cd3261b66 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 2.3E-46 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 AL504_RS11800 a9cf4e63cada52fed7d4867cd3261b66 140 PIRSF PIRSF004638 1 140 5.9E-51 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 Pfam PF00005 ABC transporter 372 520 9.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 SUPERFAMILY SSF90123 21 328 2.35E-47 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 SMART SM00382 380 566 1.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 Gene3D G3DSA:3.40.50.300 345 596 6.7E-75 T 28-03-2018 AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 SUPERFAMILY SSF52540 347 591 1.21E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 Pfam PF00664 ABC transporter transmembrane region 33 307 4.9E-18 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL504_RS07265 c48aebffe5c0a79e951979d35cb51d8e 632 Gene3D G3DSA:1.20.1560.10 14 344 9.1E-38 T 28-03-2018 AL504_RS09045 eccfe88f3d619181d1bf0e2fe7e6258c 306 SUPERFAMILY SSF53756 11 279 1.1E-24 T 28-03-2018 AL504_RS09045 eccfe88f3d619181d1bf0e2fe7e6258c 306 Gene3D G3DSA:3.40.50.2000 140 305 2.1E-19 T 28-03-2018 AL504_RS09045 eccfe88f3d619181d1bf0e2fe7e6258c 306 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 139 267 5.0E-7 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL504_RS24745 97bb2cacdf2e532da2b4e54ee2c44ab6 290 SMART SM00244 29 192 1.8E-4 T 28-03-2018 IPR001107 Band 7 domain AL504_RS24745 97bb2cacdf2e532da2b4e54ee2c44ab6 290 Pfam PF01145 SPFH domain / Band 7 family 33 206 9.2E-30 T 28-03-2018 IPR001107 Band 7 domain AL504_RS24745 97bb2cacdf2e532da2b4e54ee2c44ab6 290 SUPERFAMILY SSF117892 61 197 2.35E-13 T 28-03-2018 IPR001107 Band 7 domain AL504_RS05655 20912b2e97c4d0968997293487e42e36 126 Gene3D G3DSA:3.30.10.10 69 123 4.1E-4 T 28-03-2018 AL504_RS05655 20912b2e97c4d0968997293487e42e36 126 Pfam PF11720 Peptidase inhibitor I78 family 62 126 7.2E-23 T 28-03-2018 IPR021719 Proteinase inhibitor I78 AL504_RS28915 1ed54e5222824621f5e993ec284c8497 356 Pfam PF01497 Periplasmic binding protein 103 283 3.4E-20 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS28915 1ed54e5222824621f5e993ec284c8497 356 Gene3D G3DSA:3.40.50.1980 20 151 1.2E-15 T 28-03-2018 AL504_RS28915 1ed54e5222824621f5e993ec284c8497 356 SUPERFAMILY SSF53807 29 343 1.92E-50 T 28-03-2018 AL504_RS28915 1ed54e5222824621f5e993ec284c8497 356 Gene3D G3DSA:3.40.50.1980 152 325 1.1E-36 T 28-03-2018 AL504_RS11930 c864a75e7350cae9eb771d9df8f752aa 152 SUPERFAMILY SSF55729 3 149 3.9E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS11930 c864a75e7350cae9eb771d9df8f752aa 152 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 1.5E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS11930 c864a75e7350cae9eb771d9df8f752aa 152 Gene3D G3DSA:3.40.630.30 2 152 2.9E-29 T 28-03-2018 AL504_RS09115 b0db595aaedaffd7ef363d749e11c387 355 Pfam PF00155 Aminotransferase class I and II 25 351 7.7E-59 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS09115 b0db595aaedaffd7ef363d749e11c387 355 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 353 4.0E-93 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL504_RS09115 b0db595aaedaffd7ef363d749e11c387 355 SUPERFAMILY SSF53383 5 354 2.36E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS09115 b0db595aaedaffd7ef363d749e11c387 355 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL504_RS09115 b0db595aaedaffd7ef363d749e11c387 355 Gene3D G3DSA:3.40.640.10 39 245 7.0E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS09115 b0db595aaedaffd7ef363d749e11c387 355 Gene3D G3DSA:3.90.1150.10 246 350 2.6E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS09115 b0db595aaedaffd7ef363d749e11c387 355 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 355 55.836 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL504_RS30055 7df34ae99701d4fd2399ddf9b9b27d24 183 SUPERFAMILY SSF52499 2 168 4.32E-43 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS30055 7df34ae99701d4fd2399ddf9b9b27d24 183 Pfam PF00857 Isochorismatase family 3 145 2.6E-35 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS30055 7df34ae99701d4fd2399ddf9b9b27d24 183 Gene3D G3DSA:3.40.50.850 1 176 4.8E-41 T 28-03-2018 AL504_RS25250 d1c3ce14b81f6739ccfcbcf22932808f 232 Pfam PF00005 ABC transporter 17 161 9.0E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS25250 d1c3ce14b81f6739ccfcbcf22932808f 232 SMART SM00382 26 211 7.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS25250 d1c3ce14b81f6739ccfcbcf22932808f 232 Gene3D G3DSA:3.40.50.300 1 225 2.5E-55 T 28-03-2018 AL504_RS25250 d1c3ce14b81f6739ccfcbcf22932808f 232 SUPERFAMILY SSF52540 2 221 8.68E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25250 d1c3ce14b81f6739ccfcbcf22932808f 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 1.1E-104 T 28-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AL504_RS12920 71bb714f5f72306646a21e1929e68ce8 264 Gene3D G3DSA:1.10.3720.10 17 261 1.6E-23 T 28-03-2018 AL504_RS12920 71bb714f5f72306646a21e1929e68ce8 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 259 2.9E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS12920 71bb714f5f72306646a21e1929e68ce8 264 SUPERFAMILY SSF161098 61 248 5.1E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS24860 7dad58a84e54e35abac65612afce77f1 128 SUPERFAMILY SSF54593 2 127 3.62E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS24860 7dad58a84e54e35abac65612afce77f1 128 Gene3D G3DSA:3.10.180.10 1 128 2.5E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS24860 7dad58a84e54e35abac65612afce77f1 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 121 7.1E-8 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 SUPERFAMILY SSF56935 21 376 2.07E-75 T 28-03-2018 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00184 Neisseria sp. porin signature 330 354 1.4E-10 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00184 Neisseria sp. porin signature 158 175 1.4E-10 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00184 Neisseria sp. porin signature 58 83 1.4E-10 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 195 207 5.8E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 56 67 5.8E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 159 170 5.8E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 333 350 5.8E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 100 110 5.8E-7 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 Gene3D G3DSA:2.40.160.10 8 376 1.7E-71 T 28-03-2018 AL504_RS12575 53fc568b48262cfad84cb09fed0dbe9a 376 Pfam PF13609 Gram-negative porin 7 356 1.9E-55 T 28-03-2018 AL504_RS14105 c924f098eeb8c405c848566a9767d335 291 Gene3D G3DSA:3.60.130.10 1 291 2.4E-60 T 28-03-2018 AL504_RS14105 c924f098eeb8c405c848566a9767d335 291 SUPERFAMILY SSF51197 2 287 2.56E-72 T 28-03-2018 AL504_RS14105 c924f098eeb8c405c848566a9767d335 291 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 10 279 6.1E-59 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AL504_RS07495 0e64365b59d3fad7cdd75538cb67b7b5 238 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 39 222 8.9E-50 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AL504_RS07495 0e64365b59d3fad7cdd75538cb67b7b5 238 Pfam PF00005 ABC transporter 42 178 7.9E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS07495 0e64365b59d3fad7cdd75538cb67b7b5 238 SUPERFAMILY SSF52540 38 224 7.48E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07495 0e64365b59d3fad7cdd75538cb67b7b5 238 SMART SM00382 48 227 1.8E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07495 0e64365b59d3fad7cdd75538cb67b7b5 238 Gene3D G3DSA:3.40.50.300 33 238 3.3E-34 T 28-03-2018 AL504_RS11350 daca00ba43eccd8fbb078f30f02db995 304 Gene3D G3DSA:3.40.800.20 1 304 3.6E-110 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS11350 daca00ba43eccd8fbb078f30f02db995 304 Pfam PF00850 Histone deacetylase domain 17 301 2.5E-83 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS11350 daca00ba43eccd8fbb078f30f02db995 304 SUPERFAMILY SSF52768 2 303 7.19E-103 T 28-03-2018 AL504_RS11350 daca00ba43eccd8fbb078f30f02db995 304 PRINTS PR01270 Histone deacetylase superfamily signature 231 241 6.8E-18 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS11350 daca00ba43eccd8fbb078f30f02db995 304 PRINTS PR01270 Histone deacetylase superfamily signature 153 168 6.8E-18 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS11350 daca00ba43eccd8fbb078f30f02db995 304 PRINTS PR01270 Histone deacetylase superfamily signature 119 142 6.8E-18 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL504_RS22690 c3da2894bee3627f2dd5dd02342cfc71 451 Gene3D G3DSA:3.20.20.140 70 358 2.5E-62 T 28-03-2018 AL504_RS22690 c3da2894bee3627f2dd5dd02342cfc71 451 SUPERFAMILY SSF51338 377 447 4.2E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS22690 c3da2894bee3627f2dd5dd02342cfc71 451 SUPERFAMILY SSF51338 8 55 4.2E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS22690 c3da2894bee3627f2dd5dd02342cfc71 451 SUPERFAMILY SSF51556 56 377 3.81E-67 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS22690 c3da2894bee3627f2dd5dd02342cfc71 451 Pfam PF01979 Amidohydrolase family 53 430 2.4E-14 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS22690 c3da2894bee3627f2dd5dd02342cfc71 451 Gene3D G3DSA:2.30.40.10 359 439 7.5E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS22690 c3da2894bee3627f2dd5dd02342cfc71 451 Gene3D G3DSA:2.30.40.10 5 69 2.4E-14 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS23595 03c4905b611176623d10164963a93954 334 SUPERFAMILY SSF53850 112 293 5.07E-9 T 28-03-2018 AL504_RS23595 03c4905b611176623d10164963a93954 334 Gene3D G3DSA:3.40.190.10 132 241 2.5E-7 T 28-03-2018 AL504_RS23595 03c4905b611176623d10164963a93954 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 328 2.1E-62 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS23595 03c4905b611176623d10164963a93954 334 PIRSF PIRSF017082 1 333 7.1E-65 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS08675 c1c5df65246c1d0751eb9054cd3e0b0b 319 Pfam PF02643 Uncharacterized ACR, COG1430 2 75 3.0E-10 T 28-03-2018 IPR003795 Protein of unknown function DUF192 AL504_RS09390 a0302e0bd37f7b55772fb2816f08d92b 326 SUPERFAMILY SSF103481 53 161 1.57E-14 T 28-03-2018 AL504_RS09390 a0302e0bd37f7b55772fb2816f08d92b 326 Pfam PF00892 EamA-like transporter family 19 158 6.1E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS09390 a0302e0bd37f7b55772fb2816f08d92b 326 Pfam PF00892 EamA-like transporter family 172 307 3.2E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS09390 a0302e0bd37f7b55772fb2816f08d92b 326 SUPERFAMILY SSF103481 226 308 1.31E-10 T 28-03-2018 AL504_RS30715 7ed29620219e8dc29bd24edc04a81260 419 Gene3D G3DSA:1.10.760.10 278 419 1.0E-36 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS30715 7ed29620219e8dc29bd24edc04a81260 419 SUPERFAMILY SSF46626 90 211 1.63E-35 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS30715 7ed29620219e8dc29bd24edc04a81260 419 Gene3D G3DSA:1.10.760.10 86 277 6.3E-41 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS30715 7ed29620219e8dc29bd24edc04a81260 419 Pfam PF03150 Di-haem cytochrome c peroxidase 97 280 6.1E-41 T 28-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL504_RS30715 7ed29620219e8dc29bd24edc04a81260 419 PIRSF PIRSF000294 74 235 6.6E-32 T 28-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL504_RS30715 7ed29620219e8dc29bd24edc04a81260 419 PIRSF PIRSF000294 236 419 5.5E-32 T 28-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL504_RS30715 7ed29620219e8dc29bd24edc04a81260 419 SUPERFAMILY SSF46626 257 419 2.0E-32 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS31205 46eb0c0f6f80c3859ee7c8d4d48107e1 181 Pfam PF03350 Uncharacterized protein family, UPF0114 16 132 2.3E-40 T 28-03-2018 IPR005134 Uncharacterised protein family UPF0114 AL504_RS31205 46eb0c0f6f80c3859ee7c8d4d48107e1 181 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 12 179 4.3E-58 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AL504_RS31205 46eb0c0f6f80c3859ee7c8d4d48107e1 181 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 181 90.399 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AL504_RS16455 39eb4d022f80535ec573e5127287f2fc 517 Gene3D G3DSA:3.30.200.20 98 243 2.4E-22 T 28-03-2018 AL504_RS16455 39eb4d022f80535ec573e5127287f2fc 517 Pfam PF03109 ABC1 family 108 229 4.9E-33 T 28-03-2018 IPR004147 UbiB domain AL504_RS16455 39eb4d022f80535ec573e5127287f2fc 517 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 442 4.7E-171 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL504_RS16455 39eb4d022f80535ec573e5127287f2fc 517 SUPERFAMILY SSF56112 90 153 3.43E-42 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS16455 39eb4d022f80535ec573e5127287f2fc 517 SUPERFAMILY SSF56112 188 435 3.43E-42 T 28-03-2018 IPR011009 Protein kinase-like domain AL504_RS06620 6a6b160a575a4b855b57f26a51d286cb 260 Pfam PF04989 Cephalosporin hydroxylase 41 259 2.1E-89 T 28-03-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 AL504_RS06620 6a6b160a575a4b855b57f26a51d286cb 260 SUPERFAMILY SSF53335 34 258 1.14E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS06620 6a6b160a575a4b855b57f26a51d286cb 260 Gene3D G3DSA:3.40.50.150 6 257 4.2E-9 T 28-03-2018 AL504_RS02245 120e7b9499b0c2edc5ecfef408386caa 349 Gene3D G3DSA:3.40.50.300 11 189 4.9E-22 T 28-03-2018 AL504_RS02245 120e7b9499b0c2edc5ecfef408386caa 349 Gene3D G3DSA:1.20.272.10 238 348 1.0E-9 T 28-03-2018 AL504_RS02245 120e7b9499b0c2edc5ecfef408386caa 349 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 20 225 4.3E-64 T 28-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL504_RS02245 120e7b9499b0c2edc5ecfef408386caa 349 Pfam PF13177 DNA polymerase III, delta subunit 21 192 1.4E-37 T 28-03-2018 AL504_RS02245 120e7b9499b0c2edc5ecfef408386caa 349 SUPERFAMILY SSF52540 110 230 3.93E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS02245 120e7b9499b0c2edc5ecfef408386caa 349 SUPERFAMILY SSF52540 8 83 3.93E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12620 1ceca368943336d6e02c47a106bc9c6b 298 Gene3D G3DSA:3.40.190.10 87 174 1.8E-12 T 28-03-2018 AL504_RS12620 1ceca368943336d6e02c47a106bc9c6b 298 Pfam PF03466 LysR substrate binding domain 87 287 1.2E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS12620 1ceca368943336d6e02c47a106bc9c6b 298 Gene3D G3DSA:1.10.10.10 1 83 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12620 1ceca368943336d6e02c47a106bc9c6b 298 SUPERFAMILY SSF53850 87 283 5.25E-35 T 28-03-2018 AL504_RS12620 1ceca368943336d6e02c47a106bc9c6b 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS12620 1ceca368943336d6e02c47a106bc9c6b 298 Gene3D G3DSA:3.40.190.10 175 263 4.4E-15 T 28-03-2018 AL504_RS12620 1ceca368943336d6e02c47a106bc9c6b 298 SUPERFAMILY SSF46785 1 109 9.83E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 SUPERFAMILY SSF46785 13 83 5.86E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 SMART SM00345 20 79 1.8E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 Gene3D G3DSA:1.10.10.10 20 82 4.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 2.7E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 SUPERFAMILY SSF53383 117 460 1.5E-74 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 Gene3D G3DSA:3.90.1150.10 378 468 7.2E-14 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 Gene3D G3DSA:3.40.640.10 134 377 4.5E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS23065 895a95b9b60804384fd4afafe382fb5f 472 Pfam PF00155 Aminotransferase class I and II 147 455 1.3E-32 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS00750 d452aff57e17e536571d6f06cb05e7b7 718 SUPERFAMILY SSF56935 34 718 1.3E-129 T 28-03-2018 AL504_RS00750 d452aff57e17e536571d6f06cb05e7b7 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 718 6.3E-112 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS00750 d452aff57e17e536571d6f06cb05e7b7 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 176 9.8E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00750 d452aff57e17e536571d6f06cb05e7b7 718 Gene3D G3DSA:2.170.130.10 29 183 5.1E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS00750 d452aff57e17e536571d6f06cb05e7b7 718 Pfam PF00593 TonB dependent receptor 251 717 1.1E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS00750 d452aff57e17e536571d6f06cb05e7b7 718 Gene3D G3DSA:2.40.170.20 189 718 7.5E-77 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS15985 67fb5749fe98374277a4866f40937425 414 SUPERFAMILY SSF53474 6 234 5.2E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15985 67fb5749fe98374277a4866f40937425 414 Gene3D G3DSA:3.40.50.1820 5 238 5.0E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15985 67fb5749fe98374277a4866f40937425 414 SUPERFAMILY SSF54427 245 384 1.75E-23 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS15985 67fb5749fe98374277a4866f40937425 414 Pfam PF01738 Dienelactone hydrolase family 20 234 4.8E-46 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL504_RS15985 67fb5749fe98374277a4866f40937425 414 Gene3D G3DSA:3.10.450.50 245 381 3.7E-19 T 28-03-2018 AL504_RS00645 16e781c0f5dd3820a7dc833d9d35b09e 301 Gene3D G3DSA:1.10.10.10 3 84 6.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00645 16e781c0f5dd3820a7dc833d9d35b09e 301 Pfam PF03466 LysR substrate binding domain 88 293 1.0E-49 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00645 16e781c0f5dd3820a7dc833d9d35b09e 301 SUPERFAMILY SSF46785 5 85 1.36E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00645 16e781c0f5dd3820a7dc833d9d35b09e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 4.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00645 16e781c0f5dd3820a7dc833d9d35b09e 301 SUPERFAMILY SSF53850 89 293 8.53E-49 T 28-03-2018 AL504_RS00645 16e781c0f5dd3820a7dc833d9d35b09e 301 Gene3D G3DSA:3.40.190.10 89 174 2.0E-16 T 28-03-2018 AL504_RS00645 16e781c0f5dd3820a7dc833d9d35b09e 301 Gene3D G3DSA:3.40.190.10 175 262 9.5E-27 T 28-03-2018 AL504_RS07665 8319d0d4986e44ace35d35e9be45a3a5 127 PIRSF PIRSF018634 2 125 7.0E-29 T 28-03-2018 IPR009387 Toxin HigB-2 AL504_RS07665 8319d0d4986e44ace35d35e9be45a3a5 127 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 3 121 4.1E-39 T 28-03-2018 IPR009387 Toxin HigB-2 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 SUPERFAMILY SSF55874 325 488 2.75E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 SMART SM00387 381 490 1.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 2.9E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 2.9E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 2.9E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 SUPERFAMILY SSF47384 252 335 7.65E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 Gene3D G3DSA:1.10.287.130 258 329 9.4E-15 T 28-03-2018 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 1.5E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 SMART SM00388 267 335 1.5E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 Gene3D G3DSA:3.30.565.10 330 490 3.9E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 488 6.8E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS02565 9112689b15ba161ff5c6ae9f4531d6a9 490 Gene3D G3DSA:3.30.450.20 34 164 2.9E-5 T 28-03-2018 AL504_RS20080 481f46b94b854843203cd0bcf116a75b 429 Pfam PF01578 Cytochrome C assembly protein 167 424 1.3E-44 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL504_RS20080 481f46b94b854843203cd0bcf116a75b 429 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 140 427 1.7E-73 T 28-03-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 AL504_RS03310 893393a72173788afdab179301471895 249 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 231 1.4E-59 T 28-03-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family AL504_RS03310 893393a72173788afdab179301471895 249 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 1.8E-4 T 28-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AL504_RS16560 81cf9e1463c009b5b1464c1ea9f33dec 335 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 296 1.8E-86 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS16560 81cf9e1463c009b5b1464c1ea9f33dec 335 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 319 2.6E-87 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS16560 81cf9e1463c009b5b1464c1ea9f33dec 335 SMART SM00797 24 313 1.0E-125 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL504_RS16560 81cf9e1463c009b5b1464c1ea9f33dec 335 Gene3D G3DSA:3.40.50.300 2 335 5.6E-4 T 28-03-2018 AL504_RS16560 81cf9e1463c009b5b1464c1ea9f33dec 335 SUPERFAMILY SSF50891 197 303 9.1E-8 T 28-03-2018 IPR029000 Cyclophilin-like domain AL504_RS30015 794b8b0bfc08fa50945c0e777b446622 409 Gene3D G3DSA:3.10.28.20 289 383 7.7E-17 T 28-03-2018 AL504_RS30015 794b8b0bfc08fa50945c0e777b446622 409 Pfam PF03069 Acetamidase/Formamidase family 8 384 1.7E-175 T 28-03-2018 IPR004304 Acetamidase/Formamidase GO:0016811 AL504_RS30015 794b8b0bfc08fa50945c0e777b446622 409 SUPERFAMILY SSF141130 213 383 3.79E-78 T 28-03-2018 AL504_RS30015 794b8b0bfc08fa50945c0e777b446622 409 SUPERFAMILY SSF141130 16 164 3.79E-78 T 28-03-2018 AL504_RS30015 794b8b0bfc08fa50945c0e777b446622 409 Gene3D G3DSA:2.60.120.580 150 281 1.7E-32 T 28-03-2018 AL504_RS30015 794b8b0bfc08fa50945c0e777b446622 409 Gene3D G3DSA:2.60.120.580 1 149 7.3E-35 T 28-03-2018 AL504_RS16535 f72f4f9efb987b951466a8ff1167e431 391 Pfam PF03929 PepSY-associated TM region 31 388 5.0E-50 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS16535 f72f4f9efb987b951466a8ff1167e431 391 Gene3D G3DSA:1.20.950.20 171 390 0.072 T 28-03-2018 AL504_RS03910 5d7eae1411ed38ce5c2cc567ce17777a 527 Gene3D G3DSA:3.40.190.10 150 296 3.9E-32 T 28-03-2018 AL504_RS03910 5d7eae1411ed38ce5c2cc567ce17777a 527 Gene3D G3DSA:3.90.76.10 57 149 4.4E-25 T 28-03-2018 AL504_RS03910 5d7eae1411ed38ce5c2cc567ce17777a 527 SUPERFAMILY SSF53850 29 504 1.16E-103 T 28-03-2018 AL504_RS03910 5d7eae1411ed38ce5c2cc567ce17777a 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 446 1.7E-74 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS03910 5d7eae1411ed38ce5c2cc567ce17777a 527 Gene3D G3DSA:3.10.105.10 297 496 4.0E-32 T 28-03-2018 AL504_RS03910 5d7eae1411ed38ce5c2cc567ce17777a 527 PIRSF PIRSF002741 1 508 1.6E-68 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS26880 c0b565f0a16bfa37801f1fa227095eea 290 TIGRFAM TIGR02321 Pphn_pyruv_hyd: phosphonopyruvate hydrolase 1 290 1.2E-155 T 28-03-2018 IPR012649 Phosphonopyruvate hydrolase KEGG: 00440+3.11.1.3 AL504_RS26880 c0b565f0a16bfa37801f1fa227095eea 290 SUPERFAMILY SSF51621 2 289 1.57E-74 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS26880 c0b565f0a16bfa37801f1fa227095eea 290 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 253 4.7E-69 T 28-03-2018 AL504_RS26880 c0b565f0a16bfa37801f1fa227095eea 290 Gene3D G3DSA:3.20.20.60 1 288 1.4E-67 T 28-03-2018 AL504_RS05700 670dbc19e103b5aa25d05891953a47b1 245 Pfam PF08808 RES domain 73 201 4.5E-7 T 28-03-2018 IPR014914 RES domain AL504_RS09305 e28a332ab94d168dd832b038f6337a75 203 Pfam PF14317 YcxB-like protein 128 185 1.2E-10 T 28-03-2018 IPR025588 YcxB-like protein AL504_RS27360 fb61f1afe68640dd6e618ac1ada0a760 696 Pfam PF04632 Fusaric acid resistance protein family 34 666 1.1E-134 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AL504_RS25405 5c6fea9fdee82573a81265a8cbdfa08e 229 Pfam PF07077 Protein of unknown function (DUF1345) 54 220 1.3E-53 T 28-03-2018 IPR009781 Protein of unknown function DUF1345 AL504_RS22460 5db3f4aed647d1504d4c0cc1139abacd 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 4.8E-25 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis AL504_RS22460 5db3f4aed647d1504d4c0cc1139abacd 66 Gene3D G3DSA:3.10.20.30 1 66 1.4E-25 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS22460 5db3f4aed647d1504d4c0cc1139abacd 66 Pfam PF02597 ThiS family 3 66 2.5E-17 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AL504_RS22460 5db3f4aed647d1504d4c0cc1139abacd 66 SUPERFAMILY SSF54285 3 65 6.25E-20 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 SUPERFAMILY SSF51735 18 273 1.6E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 35 270 4.2E-49 T 28-03-2018 AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 Gene3D G3DSA:3.40.50.720 8 287 3.8E-63 T 28-03-2018 AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 168 1.2E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 234 254 1.2E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 27 44 1.2E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 1.2E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 105 116 1.2E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 1.2E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07740 b92f9a20943f5945aa00562a17a3c686 303 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 26 171 9.4E-4 T 28-03-2018 AL504_RS10420 89a19454f51171499f4fd45ad10a9d6f 602 Pfam PF13687 Domain of unknown function (DUF4153) 160 390 8.7E-18 T 28-03-2018 IPR025291 Protein of unknown function DUF4153 AL504_RS14285 dffe88127209b058d3ae32df9d04ddc1 390 PIRSF PIRSF000429 7 383 1.1E-28 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL504_RS14285 dffe88127209b058d3ae32df9d04ddc1 390 Gene3D G3DSA:3.40.47.10 20 121 1.5E-5 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS14285 dffe88127209b058d3ae32df9d04ddc1 390 SUPERFAMILY SSF53901 235 376 1.03E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS14285 dffe88127209b058d3ae32df9d04ddc1 390 Gene3D G3DSA:3.40.47.10 147 378 8.7E-33 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS14285 dffe88127209b058d3ae32df9d04ddc1 390 Pfam PF02803 Thiolase, C-terminal domain 267 368 4.8E-6 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL504_RS14285 dffe88127209b058d3ae32df9d04ddc1 390 SUPERFAMILY SSF53901 29 119 4.36E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS14285 dffe88127209b058d3ae32df9d04ddc1 390 SUPERFAMILY SSF53901 184 334 4.36E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL504_RS23480 017db7ebf5bd5971d2833c364bb36269 328 Gene3D G3DSA:1.10.3470.10 23 302 1.0E-31 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS23480 017db7ebf5bd5971d2833c364bb36269 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 296 2.7E-35 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 Gene3D G3DSA:3.90.1170.30 45 129 7.3E-7 T 28-03-2018 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 Gene3D G3DSA:1.20.1600.10 146 408 5.0E-13 T 28-03-2018 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 ProSitePatterns PS00543 HlyD family secretion proteins signature. 414 436 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 35 446 1.5E-122 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 Pfam PF00529 HlyD membrane-fusion protein of T1SS 45 406 2.4E-17 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 1.6E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 1.6E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 429 449 1.6E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 43 66 1.6E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 85 105 1.6E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 414 429 1.6E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS22390 929416c49ec02fcb6a804a3f6e43b095 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 1.6E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 Gene3D G3DSA:3.30.70.270 400 571 6.0E-20 T 28-03-2018 AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 501 7.2E-12 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 SUPERFAMILY SSF54631 274 405 3.32E-10 T 28-03-2018 AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 Gene3D G3DSA:3.20.20.450 1 241 8.3E-52 T 28-03-2018 IPR001633 EAL domain AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 SUPERFAMILY SSF141868 4 233 1.96E-51 T 28-03-2018 IPR001633 EAL domain AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 SMART SM00052 1 238 7.6E-22 T 28-03-2018 IPR001633 EAL domain AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 SMART SM00267 389 576 1.9E-5 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 Gene3D G3DSA:3.10.580.10 267 399 2.1E-9 T 28-03-2018 AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 Pfam PF00571 CBS domain 284 317 3.9E-5 T 28-03-2018 IPR000644 CBS domain AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 423 495 3.1E-11 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 SUPERFAMILY SSF55073 406 503 5.73E-17 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS04830 62e9d808ea79e1e818a19429f04ac335 589 Pfam PF00563 EAL domain 6 233 9.1E-45 T 28-03-2018 IPR001633 EAL domain AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 SUPERFAMILY SSF52540 33 201 4.8E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 SUPERFAMILY SSF52540 232 367 4.8E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 12 813 0.0 T 28-03-2018 IPR026362 DEXH box helicase, DNA ligase-associated AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 SMART SM00487 19 229 1.8E-24 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 SMART SM00490 278 360 5.8E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 Gene3D G3DSA:3.40.50.300 4 211 7.9E-32 T 28-03-2018 AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 Pfam PF00271 Helicase conserved C-terminal domain 260 356 1.9E-12 T 28-03-2018 IPR001650 Helicase, C-terminal AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 Pfam PF08494 DEAD/H associated 597 784 1.0E-41 T 28-03-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 Pfam PF00270 DEAD/DEAH box helicase 25 199 1.2E-24 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 PIRSF PIRSF037307 7 816 1.7E-130 T 28-03-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AL504_RS24225 c339f0b86ad8a383a75048d3f47eaed4 820 Gene3D G3DSA:3.40.50.300 246 392 1.3E-22 T 28-03-2018 AL504_RS29365 0790054828eebe1893aca8dbc7bc479c 161 Pfam PF10722 Putative bacterial sensory transduction regulator 12 130 1.6E-8 T 28-03-2018 IPR019660 Putative sensory transduction regulator YbjN AL504_RS08560 12e4a2024a4fd05aaaa50204a5a14003 371 SUPERFAMILY SSF54001 250 278 7.06E-5 T 28-03-2018 AL504_RS14950 9e02838f502af412026e32401cd9e906 507 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 22 441 4.7E-133 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 Gene3D G3DSA:1.10.357.10 66 200 5.5E-15 T 28-03-2018 AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 104 198 1.6E-8 T 28-03-2018 AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 SUPERFAMILY SSF48498 87 198 1.29E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.7E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.7E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 Gene3D G3DSA:1.10.10.60 4 65 6.1E-19 T 28-03-2018 AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 SUPERFAMILY SSF46689 6 85 3.45E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS12670 70a617ce167d8c941e7698f24421e4e0 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 6.9E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS09905 52b8c34a35c065dc1490776c378c2e7e 282 Gene3D G3DSA:3.20.20.370 14 281 6.2E-44 T 28-03-2018 AL504_RS09905 52b8c34a35c065dc1490776c378c2e7e 282 SUPERFAMILY SSF88713 136 280 6.43E-38 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS09905 52b8c34a35c065dc1490776c378c2e7e 282 SUPERFAMILY SSF88713 21 99 6.43E-38 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS09905 52b8c34a35c065dc1490776c378c2e7e 282 Pfam PF01522 Polysaccharide deacetylase 56 219 7.4E-33 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL504_RS00485 0bbf65a0d56dec92d657eb28a566ac3d 229 Gene3D G3DSA:3.30.1150.10 121 212 7.3E-6 T 28-03-2018 AL504_RS00485 0bbf65a0d56dec92d657eb28a566ac3d 229 SUPERFAMILY SSF74653 109 210 2.22E-11 T 28-03-2018 AL504_RS00485 0bbf65a0d56dec92d657eb28a566ac3d 229 SMART SM00965 52 102 7.4E-8 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS30905 a17ca1e72009fad186e4de7a43d0df89 574 Gene3D G3DSA:3.40.50.300 22 354 1.1E-18 T 28-03-2018 AL504_RS30905 a17ca1e72009fad186e4de7a43d0df89 574 SUPERFAMILY SSF52540 215 343 6.19E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30905 a17ca1e72009fad186e4de7a43d0df89 574 SUPERFAMILY SSF52540 1 115 6.19E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30905 a17ca1e72009fad186e4de7a43d0df89 574 Pfam PF13175 AAA ATPase domain 221 333 1.4E-16 T 28-03-2018 AL504_RS30405 d46716d90555d5e0cb6d7ac0ff8e9ddf 454 Gene3D G3DSA:2.40.50.140 7 118 4.2E-6 T 28-03-2018 AL504_RS30405 d46716d90555d5e0cb6d7ac0ff8e9ddf 454 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 18 445 4.5E-134 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS30405 d46716d90555d5e0cb6d7ac0ff8e9ddf 454 Gene3D G3DSA:3.40.50.1970 137 252 4.0E-4 T 28-03-2018 AL504_RS30405 d46716d90555d5e0cb6d7ac0ff8e9ddf 454 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 14 446 27.461 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL504_RS30405 d46716d90555d5e0cb6d7ac0ff8e9ddf 454 Pfam PF02601 Exonuclease VII, large subunit 133 442 3.9E-87 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AL504_RS30405 d46716d90555d5e0cb6d7ac0ff8e9ddf 454 Pfam PF13742 OB-fold nucleic acid binding domain 17 109 1.7E-30 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 Gene3D G3DSA:3.40.50.2300 11 156 6.7E-25 T 28-03-2018 AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 Gene3D G3DSA:3.40.50.2300 157 333 2.0E-36 T 28-03-2018 AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 5.8E-11 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 285 298 5.8E-11 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 5.8E-11 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 5.8E-11 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 SUPERFAMILY SSF53822 25 385 2.86E-88 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS20920 27f7ac541c17001b14a739f8664fb741 387 Pfam PF13458 Periplasmic binding protein 25 381 1.2E-70 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 4.6E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 Gene3D G3DSA:3.40.640.10 147 380 2.4E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 Gene3D G3DSA:1.10.10.10 11 87 4.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 SMART SM00345 26 85 3.7E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 SUPERFAMILY SSF53383 130 488 5.12E-76 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 8.4E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 8.4E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 SUPERFAMILY SSF46785 16 87 4.47E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 Gene3D G3DSA:3.90.1150.10 381 490 2.1E-13 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS28995 f7df54c05d9602ec99815fc0a12844b0 500 Pfam PF00155 Aminotransferase class I and II 171 448 2.7E-20 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS18930 c89da2d2e7dc63901d320f12862d188c 155 Pfam PF05932 Tir chaperone protein (CesT) family 7 115 3.2E-7 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL504_RS18930 c89da2d2e7dc63901d320f12862d188c 155 SUPERFAMILY SSF69635 1 140 5.65E-19 T 28-03-2018 AL504_RS18930 c89da2d2e7dc63901d320f12862d188c 155 Gene3D G3DSA:3.30.1460.10 1 142 1.8E-22 T 28-03-2018 AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 Pfam PF09383 NIL domain 274 346 6.5E-15 T 28-03-2018 IPR018449 NIL domain AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 SMART SM00930 272 347 1.1E-17 T 28-03-2018 IPR018449 NIL domain AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 SMART SM00382 30 218 2.7E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 SUPERFAMILY SSF52540 1 239 1.69E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 Gene3D G3DSA:3.40.50.300 1 267 2.4E-82 T 28-03-2018 AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 SUPERFAMILY SSF55021 267 349 4.81E-14 T 28-03-2018 AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 Pfam PF00005 ABC transporter 21 169 5.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS14615 2c8802dd1920c35a80cb2b5d63408096 362 Gene3D G3DSA:3.30.70.260 268 349 4.9E-18 T 28-03-2018 AL504_RS15025 e09e41384675a97991173a38e9a2db3f 162 Gene3D G3DSA:3.90.960.10 2 161 9.9E-35 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS15025 e09e41384675a97991173a38e9a2db3f 162 SUPERFAMILY SSF55826 11 158 4.97E-32 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS15025 e09e41384675a97991173a38e9a2db3f 162 Pfam PF04073 Aminoacyl-tRNA editing domain 33 148 7.5E-26 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL504_RS03925 cb06b17e4e88132716f7d69ebe5c26a8 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 303 4.0E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS03925 cb06b17e4e88132716f7d69ebe5c26a8 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 322 9.2E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS03925 cb06b17e4e88132716f7d69ebe5c26a8 337 Gene3D G3DSA:3.40.50.300 3 336 1.3E-74 T 28-03-2018 AL504_RS03925 cb06b17e4e88132716f7d69ebe5c26a8 337 SMART SM00382 35 234 2.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS03925 cb06b17e4e88132716f7d69ebe5c26a8 337 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS03925 cb06b17e4e88132716f7d69ebe5c26a8 337 Pfam PF00005 ABC transporter 27 184 3.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS03925 cb06b17e4e88132716f7d69ebe5c26a8 337 SUPERFAMILY SSF52540 6 256 6.8E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 Gene3D G3DSA:3.40.50.150 1 251 7.0E-33 T 28-03-2018 AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 PIRSF PIRSF000398 1 266 9.3E-38 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 SUPERFAMILY SSF53335 5 241 7.06E-49 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.2E-12 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.2E-12 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 4.2E-12 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.2E-12 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL504_RS30815 af97cfc3eadcb98f8e048ee51a6b45e6 274 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 235 7.2E-20 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL504_RS17635 ae7c6b91607dfaae9994be09c8cf7949 361 Gene3D G3DSA:1.20.120.330 50 329 7.3E-8 T 28-03-2018 AL504_RS04965 1f5a37f7d8c43861a1544ebfb4eb5d70 324 SUPERFAMILY SSF53850 106 282 1.55E-6 T 28-03-2018 AL504_RS04965 1f5a37f7d8c43861a1544ebfb4eb5d70 324 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 293 5.3E-42 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS20455 526d81bc89c5f6eca6c4ac30102c92c0 442 Gene3D G3DSA:3.40.50.2000 235 426 2.9E-17 T 28-03-2018 AL504_RS20455 526d81bc89c5f6eca6c4ac30102c92c0 442 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 60 233 8.8E-51 T 28-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AL504_RS20455 526d81bc89c5f6eca6c4ac30102c92c0 442 Pfam PF00534 Glycosyl transferases group 1 321 422 1.5E-6 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS20455 526d81bc89c5f6eca6c4ac30102c92c0 442 SUPERFAMILY SSF53756 79 427 5.1E-16 T 28-03-2018 AL504_RS20040 6a6081691c7def0435ad04a40a7a1f19 145 Pfam PF01230 HIT domain 13 103 1.1E-16 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS20040 6a6081691c7def0435ad04a40a7a1f19 145 PRINTS PR00332 Histidine triad family signature 6 22 4.0E-14 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS20040 6a6081691c7def0435ad04a40a7a1f19 145 PRINTS PR00332 Histidine triad family signature 27 45 4.0E-14 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS20040 6a6081691c7def0435ad04a40a7a1f19 145 PRINTS PR00332 Histidine triad family signature 89 99 4.0E-14 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS20040 6a6081691c7def0435ad04a40a7a1f19 145 SUPERFAMILY SSF54197 3 139 1.39E-31 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL504_RS20040 6a6081691c7def0435ad04a40a7a1f19 145 Gene3D G3DSA:3.30.428.10 1 142 1.8E-29 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL504_RS23720 cdde83286379b52e541b5bc65afd6c81 258 Pfam PF00005 ABC transporter 17 164 4.9E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23720 cdde83286379b52e541b5bc65afd6c81 258 SUPERFAMILY SSF52540 2 227 1.78E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23720 cdde83286379b52e541b5bc65afd6c81 258 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23720 cdde83286379b52e541b5bc65afd6c81 258 SMART SM00382 26 213 3.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23720 cdde83286379b52e541b5bc65afd6c81 258 Gene3D G3DSA:3.40.50.300 1 239 9.5E-62 T 28-03-2018 AL504_RS18425 00891f3828d6a67be56cfe5ff130ba69 297 Pfam PF00892 EamA-like transporter family 149 286 3.4E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS18425 00891f3828d6a67be56cfe5ff130ba69 297 Pfam PF00892 EamA-like transporter family 4 134 5.5E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS18425 00891f3828d6a67be56cfe5ff130ba69 297 SUPERFAMILY SSF103481 195 287 2.75E-8 T 28-03-2018 AL504_RS18425 00891f3828d6a67be56cfe5ff130ba69 297 SUPERFAMILY SSF103481 35 138 3.27E-15 T 28-03-2018 AL504_RS14170 c558771ea8b6ac62e492a9eb56626005 299 Pfam PF03547 Membrane transport protein 151 292 4.8E-11 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL504_RS23610 bfad0c9ea80ed80e4848827746a5a16d 497 Gene3D G3DSA:3.40.309.10 279 478 1.0E-63 T 28-03-2018 AL504_RS23610 bfad0c9ea80ed80e4848827746a5a16d 497 Gene3D G3DSA:3.40.605.10 11 278 2.6E-86 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS23610 bfad0c9ea80ed80e4848827746a5a16d 497 SUPERFAMILY SSF53720 16 494 1.02E-151 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS23610 bfad0c9ea80ed80e4848827746a5a16d 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS23610 bfad0c9ea80ed80e4848827746a5a16d 497 Pfam PF00171 Aldehyde dehydrogenase family 31 492 1.5E-151 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS07690 e3c36139af4f19cc063c06158517bbd4 297 Pfam PF13557 Putative MetA-pathway of phenol degradation 65 292 7.5E-61 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AL504_RS08535 cab12470add59de7b62379bffd351cee 138 Pfam PF04304 Protein of unknown function (DUF454) 2 116 1.7E-35 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AL504_RS08535 cab12470add59de7b62379bffd351cee 138 PIRSF PIRSF016789 1 123 1.2E-36 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AL504_RS08040 ca4b8b3b8e0d2c4456d6c1c74a8f4514 151 Gene3D G3DSA:3.10.129.10 1 137 2.4E-22 T 28-03-2018 AL504_RS08040 ca4b8b3b8e0d2c4456d6c1c74a8f4514 151 SUPERFAMILY SSF54637 5 140 3.41E-23 T 28-03-2018 IPR029069 HotDog domain AL504_RS08040 ca4b8b3b8e0d2c4456d6c1c74a8f4514 151 PIRSF PIRSF020565 1 149 5.4E-51 T 28-03-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted AL504_RS03300 08db06aa87ceb7cbd77c4f834039780e 324 Gene3D G3DSA:1.10.10.60 278 323 5.1E-8 T 28-03-2018 AL504_RS03300 08db06aa87ceb7cbd77c4f834039780e 324 SMART SM00342 242 324 1.9E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS03300 08db06aa87ceb7cbd77c4f834039780e 324 SUPERFAMILY SSF46689 278 323 4.26E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS03300 08db06aa87ceb7cbd77c4f834039780e 324 Pfam PF12833 Helix-turn-helix domain 248 323 1.3E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS03300 08db06aa87ceb7cbd77c4f834039780e 324 SUPERFAMILY SSF46689 226 276 1.08E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS03300 08db06aa87ceb7cbd77c4f834039780e 324 Gene3D G3DSA:1.10.10.60 221 277 3.6E-10 T 28-03-2018 AL504_RS08615 e97713cc65e1e9324c54252ae05c3270 279 Pfam PF01435 Peptidase family M48 81 261 5.0E-37 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL504_RS08615 e97713cc65e1e9324c54252ae05c3270 279 Gene3D G3DSA:3.30.2010.10 49 166 1.4E-23 T 28-03-2018 AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 SUPERFAMILY SSF54862 21 117 1.17E-19 T 28-03-2018 AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 Gene3D G3DSA:3.30.70.20 34 77 3.6E-8 T 28-03-2018 AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 Gene3D G3DSA:3.30.70.20 78 183 9.3E-4 T 28-03-2018 AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 Gene3D G3DSA:3.30.70.20 7 33 0.016 T 28-03-2018 AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 Pfam PF02754 Cysteine-rich domain 169 255 9.4E-9 T 28-03-2018 IPR004017 Cysteine-rich domain AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 Pfam PF02754 Cysteine-rich domain 305 387 1.2E-10 T 28-03-2018 IPR004017 Cysteine-rich domain AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 PIRSF PIRSF000139 9 409 2.5E-109 T 28-03-2018 AL504_RS10515 47a6b5d99f0d8ac7c30f46eb206a47d9 409 Pfam PF13183 4Fe-4S dicluster domain 22 89 1.1E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS13745 9e8e61bed0998cdd0cd30b85775c5afa 306 SUPERFAMILY SSF51735 1 261 5.2E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS13745 9e8e61bed0998cdd0cd30b85775c5afa 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 7.4E-20 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS13745 9e8e61bed0998cdd0cd30b85775c5afa 306 Gene3D G3DSA:3.40.50.720 1 282 3.7E-41 T 28-03-2018 AL504_RS19300 7679bfa23c0c363a77fc65e7bc3076b0 151 Pfam PF07681 DoxX 30 103 1.0E-12 T 28-03-2018 IPR032808 DoxX family AL504_RS05530 b3b3c0a7fcaae887cffb429fb8e20f3c 646 Pfam PF13515 Fusaric acid resistance protein-like 350 471 5.5E-13 T 28-03-2018 AL504_RS10540 ec2c63a51f5f56161a13e228b0e6805f 486 SUPERFAMILY SSF111283 28 485 2.22E-131 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL504_RS10540 ec2c63a51f5f56161a13e228b0e6805f 486 Pfam PF01523 Putative modulator of DNA gyrase 43 337 4.3E-67 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL504_RS10540 ec2c63a51f5f56161a13e228b0e6805f 486 PIRSF PIRSF004919 23 486 9.8E-136 T 28-03-2018 IPR025502 TldD AL504_RS10540 ec2c63a51f5f56161a13e228b0e6805f 486 Gene3D G3DSA:3.30.2290.10 26 245 5.0E-53 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL504_RS30595 876a94ab0e772bd76579bc882d9a8c5f 303 SMART SM00062 51 287 4.7E-38 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS30595 876a94ab0e772bd76579bc882d9a8c5f 303 SUPERFAMILY SSF53850 10 281 1.67E-39 T 28-03-2018 AL504_RS30595 876a94ab0e772bd76579bc882d9a8c5f 303 Gene3D G3DSA:3.40.190.10 41 152 6.3E-25 T 28-03-2018 AL504_RS30595 876a94ab0e772bd76579bc882d9a8c5f 303 Gene3D G3DSA:3.40.190.10 153 239 1.2E-11 T 28-03-2018 AL504_RS30595 876a94ab0e772bd76579bc882d9a8c5f 303 TIGRFAM TIGR02995 ectoine_ehuB: ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB 34 300 3.9E-92 T 28-03-2018 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB GO:0033294|GO:0051470 AL504_RS30595 876a94ab0e772bd76579bc882d9a8c5f 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 281 1.2E-39 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 8 574 2.7E-174 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 Gene3D G3DSA:1.10.730.10 598 707 3.0E-9 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 7 710 4.0E-166 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 Pfam PF05746 DALR anticodon binding domain 605 703 1.3E-5 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 SUPERFAMILY SSF109604 355 501 1.26E-10 T 28-03-2018 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 5 710 21.778 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 9 22 4.5E-31 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 260 275 4.5E-31 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 333 349 4.5E-31 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 54 66 4.5E-31 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS14350 529a61e9eb2d20fc6a2efaa7cefea607 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 409 428 4.5E-31 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL504_RS16040 56d9fe4a61391d6f4649e17278ded295 265 SUPERFAMILY SSF55073 106 259 2.35E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS16040 56d9fe4a61391d6f4649e17278ded295 265 Gene3D G3DSA:3.30.70.270 94 263 3.2E-55 T 28-03-2018 AL504_RS16040 56d9fe4a61391d6f4649e17278ded295 265 Pfam PF00990 Diguanylate cyclase, GGDEF domain 103 257 4.0E-45 T 28-03-2018 IPR000160 GGDEF domain AL504_RS16040 56d9fe4a61391d6f4649e17278ded295 265 SMART SM00267 90 261 2.7E-63 T 28-03-2018 IPR000160 GGDEF domain AL504_RS16040 56d9fe4a61391d6f4649e17278ded295 265 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 259 4.4E-50 T 28-03-2018 IPR000160 GGDEF domain AL504_RS20895 78442423dde6b92d92c09f03d31a90f1 142 Pfam PF02566 OsmC-like protein 44 138 2.6E-15 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS20895 78442423dde6b92d92c09f03d31a90f1 142 Gene3D G3DSA:2.20.25.10 4 47 1.1E-18 T 28-03-2018 AL504_RS20895 78442423dde6b92d92c09f03d31a90f1 142 SUPERFAMILY SSF82784 1 141 9.03E-44 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS20895 78442423dde6b92d92c09f03d31a90f1 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 8.3E-54 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AL504_RS20895 78442423dde6b92d92c09f03d31a90f1 142 Gene3D G3DSA:3.30.300.20 48 142 1.1E-22 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS13300 49935250a839a4fd6259e256040c5ed5 109 SUPERFAMILY SSF103481 5 104 2.35E-21 T 28-03-2018 AL504_RS13300 49935250a839a4fd6259e256040c5ed5 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.1E-31 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL504_RS27510 5c03cb3ff38008105b80733a36d40591 235 SUPERFAMILY SSF56529 24 235 1.2E-65 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS27510 5c03cb3ff38008105b80733a36d40591 235 Gene3D G3DSA:3.90.850.10 2 235 3.9E-72 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS27510 5c03cb3ff38008105b80733a36d40591 235 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 29 234 1.0E-47 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS31290 97665431065a5aa4d5a8526faae42b73 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 5.4E-34 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL504_RS31290 97665431065a5aa4d5a8526faae42b73 64 SUPERFAMILY SSF140319 1 62 2.88E-27 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL504_RS31290 97665431065a5aa4d5a8526faae42b73 64 PIRSF PIRSF039003 1 64 2.8E-35 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL504_RS31290 97665431065a5aa4d5a8526faae42b73 64 Gene3D G3DSA:1.10.10.600 1 62 2.8E-34 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL504_RS31290 97665431065a5aa4d5a8526faae42b73 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 3.3E-35 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL504_RS00520 3b73360f834aaf60697d08c7e6b1ce04 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 41 172 2.5E-32 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 Pfam PF03170 Bacterial cellulose synthase subunit 40 645 5.1E-204 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 68 89 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 158 179 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 692 712 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 363 384 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 281 302 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 525 545 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 200 223 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19855 5ddd2fb6f4a74d0de15c6fac9106b824 749 PRINTS PR01440 Cellulose synthase subunit B signature 488 507 7.0E-42 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS14165 95f1cdd58d7b47575cbe45b0c649bcf0 327 Gene3D G3DSA:3.40.190.10 157 296 2.2E-8 T 28-03-2018 AL504_RS14165 95f1cdd58d7b47575cbe45b0c649bcf0 327 SUPERFAMILY SSF53850 116 288 2.17E-5 T 28-03-2018 AL504_RS14165 95f1cdd58d7b47575cbe45b0c649bcf0 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 323 4.2E-78 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14165 95f1cdd58d7b47575cbe45b0c649bcf0 327 PIRSF PIRSF017082 1 326 2.6E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03030 8f46bee278ace8ae0bc5c0c484dd5c8a 400 Gene3D G3DSA:2.120.10.30 39 124 0.0012 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS03030 8f46bee278ace8ae0bc5c0c484dd5c8a 400 SUPERFAMILY SSF69304 58 313 9.42E-11 T 28-03-2018 AL504_RS03030 8f46bee278ace8ae0bc5c0c484dd5c8a 400 Gene3D G3DSA:2.130.10.150 125 389 2.5E-6 T 28-03-2018 AL504_RS22210 9b4a3f6a9554a456bfe3199d78415e18 311 Gene3D G3DSA:3.20.20.70 5 307 2.2E-111 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS22210 9b4a3f6a9554a456bfe3199d78415e18 311 Pfam PF05853 beta-keto acid cleavage enzyme 7 303 2.9E-107 T 28-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 AL504_RS22825 2b87c0791d5944edece18e384e06beb9 375 Pfam PF12698 ABC-2 family transporter protein 26 364 4.5E-35 T 28-03-2018 AL504_RS22825 2b87c0791d5944edece18e384e06beb9 375 Gene3D G3DSA:3.40.1710.10 41 194 5.4E-24 T 28-03-2018 AL504_RS08175 ed34261331601afe5453af4680ec2554 472 SUPERFAMILY SSF46626 215 311 1.95E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS08175 ed34261331601afe5453af4680ec2554 472 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 223 307 6.8E-8 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS08175 ed34261331601afe5453af4680ec2554 472 Gene3D G3DSA:1.10.760.10 203 319 2.4E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27715 757c5b3e3bf2196d3bd60d2ba702fbee 246 SMART SM00418 12 91 2.8E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS27715 757c5b3e3bf2196d3bd60d2ba702fbee 246 SUPERFAMILY SSF46785 6 89 2.11E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27715 757c5b3e3bf2196d3bd60d2ba702fbee 246 Gene3D G3DSA:1.10.10.10 2 98 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27715 757c5b3e3bf2196d3bd60d2ba702fbee 246 Pfam PF12840 Helix-turn-helix domain 13 70 3.2E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27715 757c5b3e3bf2196d3bd60d2ba702fbee 246 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 6.7E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS27715 757c5b3e3bf2196d3bd60d2ba702fbee 246 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 6.7E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS27715 757c5b3e3bf2196d3bd60d2ba702fbee 246 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 6.7E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL504_RS09965 c3c5717cb15ec072ab8fa685f3d99439 554 Gene3D G3DSA:1.20.140.10 289 454 1.7E-38 T 28-03-2018 AL504_RS09965 c3c5717cb15ec072ab8fa685f3d99439 554 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 405 424 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL504_RS09965 c3c5717cb15ec072ab8fa685f3d99439 554 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 184 282 9.4E-15 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL504_RS09965 c3c5717cb15ec072ab8fa685f3d99439 554 Gene3D G3DSA:2.40.110.10 184 288 2.3E-18 T 28-03-2018 AL504_RS09965 c3c5717cb15ec072ab8fa685f3d99439 554 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 292 446 5.0E-33 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS09965 c3c5717cb15ec072ab8fa685f3d99439 554 SUPERFAMILY SSF56645 68 299 1.97E-30 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL504_RS09965 c3c5717cb15ec072ab8fa685f3d99439 554 SUPERFAMILY SSF47203 299 449 3.87E-41 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL504_RS28545 37d2fb02d4ff9e86f5cfa9dc94f6b05b 222 ProSitePatterns PS01123 Thermonuclease family signature 1. 81 105 - T 28-03-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 AL504_RS28545 37d2fb02d4ff9e86f5cfa9dc94f6b05b 222 SMART SM00318 70 202 4.5E-25 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AL504_RS28545 37d2fb02d4ff9e86f5cfa9dc94f6b05b 222 Gene3D G3DSA:2.40.50.90 67 208 6.6E-33 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain AL504_RS28545 37d2fb02d4ff9e86f5cfa9dc94f6b05b 222 SUPERFAMILY SSF50199 71 209 4.45E-32 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AL504_RS28545 37d2fb02d4ff9e86f5cfa9dc94f6b05b 222 Pfam PF00565 Staphylococcal nuclease homologue 95 201 4.8E-16 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AL504_RS06615 63876cdd32bed31ecefa80a7711e87a2 232 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 179 1.4E-24 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AL504_RS06615 63876cdd32bed31ecefa80a7711e87a2 232 PIRSF PIRSF000883 1 221 1.3E-51 T 28-03-2018 IPR011152 Phosphoesterase MJ0912 AL504_RS06615 63876cdd32bed31ecefa80a7711e87a2 232 Gene3D G3DSA:3.60.21.10 2 216 2.8E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS06615 63876cdd32bed31ecefa80a7711e87a2 232 SUPERFAMILY SSF56300 2 215 9.3E-50 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS17660 30aa1a6bdd6e9e832c6f573de54db8e0 340 SUPERFAMILY SSF81345 14 336 1.09E-69 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS17660 30aa1a6bdd6e9e832c6f573de54db8e0 340 Pfam PF01032 FecCD transport family 26 336 1.2E-84 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS17660 30aa1a6bdd6e9e832c6f573de54db8e0 340 Gene3D G3DSA:1.10.3470.10 10 338 2.4E-60 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS26485 ffe2a3cddeccdd7ea6fdaa704791367d 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 27 334 9.6E-127 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AL504_RS26485 ffe2a3cddeccdd7ea6fdaa704791367d 346 PIRSF PIRSF002756 5 339 5.1E-109 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AL504_RS26485 ffe2a3cddeccdd7ea6fdaa704791367d 346 Pfam PF12849 PBP superfamily domain 24 307 2.5E-60 T 28-03-2018 IPR024370 PBP domain AL504_RS26485 ffe2a3cddeccdd7ea6fdaa704791367d 346 SUPERFAMILY SSF53850 27 337 6.88E-96 T 28-03-2018 AL504_RS26485 ffe2a3cddeccdd7ea6fdaa704791367d 346 Gene3D G3DSA:3.40.190.10 24 158 3.2E-31 T 28-03-2018 AL504_RS26485 ffe2a3cddeccdd7ea6fdaa704791367d 346 Gene3D G3DSA:3.40.190.10 159 338 7.4E-26 T 28-03-2018 AL504_RS03480 def2e768b7534a32b4b889fd1d810a39 458 Pfam PF00296 Luciferase-like monooxygenase 18 390 4.9E-72 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS03480 def2e768b7534a32b4b889fd1d810a39 458 SUPERFAMILY SSF51679 5 438 1.07E-144 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS03480 def2e768b7534a32b4b889fd1d810a39 458 PIRSF PIRSF000337 3 445 4.2E-170 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AL504_RS03480 def2e768b7534a32b4b889fd1d810a39 458 Gene3D G3DSA:3.20.20.30 4 456 3.7E-114 T 28-03-2018 AL504_RS03480 def2e768b7534a32b4b889fd1d810a39 458 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 432 3.0E-188 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.652 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 6.3E-60 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 9.4E-42 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 9.4E-42 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 9.4E-42 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 9.4E-42 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 SUPERFAMILY SSF54686 1 134 1.27E-54 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 Gene3D G3DSA:3.90.1170.10 2 137 8.0E-50 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL504_RS19735 f1d847de536dea5acada993e25a9900e 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.2E-50 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL504_RS20360 8bd1fbef8628644fbfdb563358a17999 266 Gene3D G3DSA:3.90.550.10 16 252 1.1E-18 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20360 8bd1fbef8628644fbfdb563358a17999 266 Pfam PF02348 Cytidylyltransferase 24 168 2.4E-18 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AL504_RS20360 8bd1fbef8628644fbfdb563358a17999 266 SUPERFAMILY SSF53448 20 213 8.68E-21 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20130 333bd4c3bfa6f2aa8e3d2b380fc07040 394 Gene3D G3DSA:1.20.1250.20 12 204 1.1E-27 T 28-03-2018 AL504_RS20130 333bd4c3bfa6f2aa8e3d2b380fc07040 394 SUPERFAMILY SSF103473 13 392 8.11E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS20130 333bd4c3bfa6f2aa8e3d2b380fc07040 394 Pfam PF07690 Major Facilitator Superfamily 48 352 1.3E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS20130 333bd4c3bfa6f2aa8e3d2b380fc07040 394 Gene3D G3DSA:1.20.1250.20 205 393 6.0E-19 T 28-03-2018 AL504_RS15705 6ee860d40990034b165dc225494fe811 326 SUPERFAMILY SSF53850 116 285 3.26E-10 T 28-03-2018 AL504_RS15705 6ee860d40990034b165dc225494fe811 326 Gene3D G3DSA:3.40.190.10 8 295 5.7E-8 T 28-03-2018 AL504_RS15705 6ee860d40990034b165dc225494fe811 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 321 9.4E-66 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS15705 6ee860d40990034b165dc225494fe811 326 PIRSF PIRSF017082 1 326 1.1E-71 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10000 0b50c8c86cff191aff9e144b9d61d839 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 287 5.3E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS10000 0b50c8c86cff191aff9e144b9d61d839 306 Gene3D G3DSA:1.10.3720.10 14 296 2.2E-42 T 28-03-2018 AL504_RS10000 0b50c8c86cff191aff9e144b9d61d839 306 SUPERFAMILY SSF161098 15 292 3.14E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 130 1.0E-16 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 SUPERFAMILY SSF55920 305 562 2.88E-53 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 Gene3D G3DSA:3.40.350.10 1 148 5.3E-44 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 SUPERFAMILY SSF53092 172 300 1.54E-7 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 Gene3D G3DSA:3.90.230.10 304 556 3.9E-63 T 28-03-2018 AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 Pfam PF00557 Metallopeptidase family M24 311 524 4.1E-43 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 152 308 3.0E-35 T 28-03-2018 AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 SUPERFAMILY SSF53092 5 127 4.01E-10 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 Pfam PF16188 C-terminal region of peptidase_M24 536 596 4.3E-25 T 28-03-2018 IPR032416 Peptidase M24, C-terminal domain AL504_RS11885 4463c598507a529ed120f9a8cdd73db2 596 Gene3D G3DSA:3.40.350.10 157 303 4.3E-26 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL504_RS19185 96db4ae28d63835065ee4aeafd1f07d3 364 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 87 360 6.7E-89 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19185 96db4ae28d63835065ee4aeafd1f07d3 364 PIRSF PIRSF017082 30 363 1.5E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19185 96db4ae28d63835065ee4aeafd1f07d3 364 Gene3D G3DSA:3.40.190.10 163 274 5.0E-9 T 28-03-2018 AL504_RS19185 96db4ae28d63835065ee4aeafd1f07d3 364 SUPERFAMILY SSF53850 152 325 2.02E-11 T 28-03-2018 AL504_RS10160 3f8deb6a54bd45ed45a9e1dfbd813bda 226 Gene3D G3DSA:2.60.120.620 2 187 2.6E-32 T 28-03-2018 AL504_RS10160 3f8deb6a54bd45ed45a9e1dfbd813bda 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 4.2E-13 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL504_RS10160 3f8deb6a54bd45ed45a9e1dfbd813bda 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 46.442 T 28-03-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AL504_RS10160 3f8deb6a54bd45ed45a9e1dfbd813bda 226 SMART SM00702 1 177 1.4E-27 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AL504_RS17625 246a7504990e6cb75720198e363b0b10 302 Pfam PF14080 Domain of unknown function (DUF4261) 207 283 7.5E-15 T 28-03-2018 IPR025357 Domain of unknown function DUF4261 AL504_RS31175 05e9189e0ab0dc3dee0b9484c40996b8 99 Gene3D G3DSA:1.10.10.10 4 85 1.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS31175 05e9189e0ab0dc3dee0b9484c40996b8 99 Pfam PF10711 Hypothetical protein (DUF2513) 3 86 1.2E-7 T 28-03-2018 IPR019650 Protein of unknown function DUF2513 AL504_RS20120 07b21bea0bf6876b69d508236ce8f7b9 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 80 9.9E-12 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS20120 07b21bea0bf6876b69d508236ce8f7b9 220 Gene3D G3DSA:1.20.1050.10 97 203 7.8E-21 T 28-03-2018 AL504_RS20120 07b21bea0bf6876b69d508236ce8f7b9 220 SUPERFAMILY SSF52833 4 86 5.28E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS20120 07b21bea0bf6876b69d508236ce8f7b9 220 SUPERFAMILY SSF47616 80 202 2.84E-18 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS20120 07b21bea0bf6876b69d508236ce8f7b9 220 Gene3D G3DSA:3.40.30.10 2 96 1.1E-22 T 28-03-2018 AL504_RS09225 24f26c3cee3623633e4bc64141d3b3b8 446 Pfam PF13416 Bacterial extracellular solute-binding protein 55 370 6.5E-30 T 28-03-2018 AL504_RS09225 24f26c3cee3623633e4bc64141d3b3b8 446 Gene3D G3DSA:3.40.190.10 37 168 1.4E-13 T 28-03-2018 AL504_RS09225 24f26c3cee3623633e4bc64141d3b3b8 446 Gene3D G3DSA:3.40.190.10 169 389 2.9E-20 T 28-03-2018 AL504_RS09225 24f26c3cee3623633e4bc64141d3b3b8 446 SUPERFAMILY SSF53850 37 439 4.95E-46 T 28-03-2018 AL504_RS04030 9b67c8b90aa4bc82613742fffccd6f36 587 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 417 582 2.6E-46 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04030 9b67c8b90aa4bc82613742fffccd6f36 587 SMART SM00267 410 584 3.1E-53 T 28-03-2018 IPR000160 GGDEF domain AL504_RS04030 9b67c8b90aa4bc82613742fffccd6f36 587 Gene3D G3DSA:3.30.70.270 415 585 1.7E-52 T 28-03-2018 AL504_RS04030 9b67c8b90aa4bc82613742fffccd6f36 587 SUPERFAMILY SSF55073 426 582 7.46E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS04030 9b67c8b90aa4bc82613742fffccd6f36 587 Pfam PF00990 Diguanylate cyclase, GGDEF domain 421 580 5.1E-43 T 28-03-2018 IPR000160 GGDEF domain AL504_RS07830 c2237a7667bd17bc3ad47b5b0eebd2a3 271 Gene3D G3DSA:3.90.1580.10 89 271 5.2E-28 T 28-03-2018 AL504_RS07830 c2237a7667bd17bc3ad47b5b0eebd2a3 271 Pfam PF03781 Sulfatase-modifying factor enzyme 1 28 268 4.1E-39 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL504_RS07830 c2237a7667bd17bc3ad47b5b0eebd2a3 271 SUPERFAMILY SSF56436 50 269 6.83E-38 T 28-03-2018 IPR016187 C-type lectin fold AL504_RS06985 33e5d5b62b252180c0d0296ebec79c03 485 PIRSF PIRSF500217 1 485 9.5E-151 T 28-03-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 AL504_RS06985 33e5d5b62b252180c0d0296ebec79c03 485 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 151 373 1.9E-30 T 28-03-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT AL504_RS06985 33e5d5b62b252180c0d0296ebec79c03 485 PIRSF PIRSF016636 1 485 1.3E-151 T 28-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 Gene3D G3DSA:1.10.287.130 225 297 1.9E-14 T 28-03-2018 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 301 2.5E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 SUPERFAMILY SSF47384 218 301 2.55E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 454 2.5E-132 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 SMART SM00304 181 234 2.8E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 453 5.3E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.5E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.5E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 1.5E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 SMART SM00388 235 301 3.5E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 Gene3D G3DSA:3.30.565.10 309 458 4.8E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 SMART SM00387 346 459 5.2E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS10090 bc98ee274829be09eb7606da5a2acd18 460 SUPERFAMILY SSF55874 290 448 1.7E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS09450 e35432e0c41f414f40d13981ca17f574 195 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 194 8.3E-44 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AL504_RS09450 e35432e0c41f414f40d13981ca17f574 195 Pfam PF01467 Cytidylyltransferase-like 6 169 2.8E-25 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL504_RS09450 e35432e0c41f414f40d13981ca17f574 195 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 195 27.75 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AL504_RS09450 e35432e0c41f414f40d13981ca17f574 195 Gene3D G3DSA:3.40.50.620 1 195 4.2E-46 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS09450 e35432e0c41f414f40d13981ca17f574 195 SUPERFAMILY SSF52374 2 194 3.07E-45 T 28-03-2018 AL504_RS03450 224b719d5ef40037482d154ac2453446 223 SMART SM00945 54 168 1.7E-33 T 28-03-2018 IPR016103 ProQ/FinO domain AL504_RS03450 224b719d5ef40037482d154ac2453446 223 Pfam PF04352 ProQ/FINO family 58 159 1.2E-31 T 28-03-2018 IPR016103 ProQ/FinO domain AL504_RS03450 224b719d5ef40037482d154ac2453446 223 Gene3D G3DSA:1.10.1710.10 2 166 2.2E-38 T 28-03-2018 IPR016103 ProQ/FinO domain AL504_RS03450 224b719d5ef40037482d154ac2453446 223 SUPERFAMILY SSF48657 36 158 7.32E-32 T 28-03-2018 IPR016103 ProQ/FinO domain AL504_RS24615 db872660eb84447dd4c37afd901c70be 264 Pfam PF02104 SURF1 family 33 244 5.5E-41 T 28-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS04720 661ba38878453ae3ef7df8f91838d5af 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 6.4E-44 T 28-03-2018 IPR006056 RidA family AL504_RS04720 661ba38878453ae3ef7df8f91838d5af 128 Pfam PF01042 Endoribonuclease L-PSP 9 127 4.5E-38 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS04720 661ba38878453ae3ef7df8f91838d5af 128 Gene3D G3DSA:3.30.1330.40 1 128 2.0E-42 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS04720 661ba38878453ae3ef7df8f91838d5af 128 SUPERFAMILY SSF55298 1 128 4.71E-41 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS29290 0fa91c68622f9bcd78951f08c9ff2859 211 Gene3D G3DSA:3.40.30.10 2 104 2.1E-19 T 28-03-2018 AL504_RS29290 0fa91c68622f9bcd78951f08c9ff2859 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 83 2.3E-7 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS29290 0fa91c68622f9bcd78951f08c9ff2859 211 SUPERFAMILY SSF47616 85 209 2.18E-29 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS29290 0fa91c68622f9bcd78951f08c9ff2859 211 Gene3D G3DSA:1.20.1050.10 105 211 8.8E-24 T 28-03-2018 AL504_RS29290 0fa91c68622f9bcd78951f08c9ff2859 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 202 3.9E-11 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL504_RS29290 0fa91c68622f9bcd78951f08c9ff2859 211 SUPERFAMILY SSF52833 13 93 3.98E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS06750 62d1c1ad1dc9270843e5c4d1deb280cc 178 Gene3D G3DSA:3.10.640.10 2 177 4.0E-81 T 28-03-2018 AL504_RS06750 62d1c1ad1dc9270843e5c4d1deb280cc 178 SMART SM01322 1 176 7.9E-122 T 28-03-2018 IPR009822 YaeQ AL504_RS06750 62d1c1ad1dc9270843e5c4d1deb280cc 178 SUPERFAMILY SSF52980 5 177 3.49E-74 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS06750 62d1c1ad1dc9270843e5c4d1deb280cc 178 Pfam PF07152 YaeQ protein 1 173 1.0E-78 T 28-03-2018 IPR009822 YaeQ AL504_RS06750 62d1c1ad1dc9270843e5c4d1deb280cc 178 PIRSF PIRSF011484 1 178 7.3E-72 T 28-03-2018 IPR009822 YaeQ AL504_RS17150 a1efb4d951a8cc5c36c62a59fd3fcab6 509 Gene3D G3DSA:3.40.309.10 283 483 5.2E-66 T 28-03-2018 AL504_RS17150 a1efb4d951a8cc5c36c62a59fd3fcab6 509 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS17150 a1efb4d951a8cc5c36c62a59fd3fcab6 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS17150 a1efb4d951a8cc5c36c62a59fd3fcab6 509 Gene3D G3DSA:3.40.605.10 11 282 6.1E-96 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS17150 a1efb4d951a8cc5c36c62a59fd3fcab6 509 Pfam PF00171 Aldehyde dehydrogenase family 30 496 1.4E-164 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS17150 a1efb4d951a8cc5c36c62a59fd3fcab6 509 SUPERFAMILY SSF53720 17 501 2.62E-162 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS21275 278c7bc1d2606c7ab5d927d7caf69896 186 Gene3D G3DSA:3.10.450.50 8 141 5.4E-6 T 28-03-2018 AL504_RS21275 278c7bc1d2606c7ab5d927d7caf69896 186 SUPERFAMILY SSF54427 13 140 1.66E-9 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS19845 6e653400f6fab0dc5a1afbd56565e9fd 259 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 251 3.3E-73 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ AL504_RS19845 6e653400f6fab0dc5a1afbd56565e9fd 259 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 248 3.5E-44 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ AL504_RS19845 6e653400f6fab0dc5a1afbd56565e9fd 259 Gene3D G3DSA:3.40.50.300 1 259 5.4E-43 T 28-03-2018 AL504_RS19845 6e653400f6fab0dc5a1afbd56565e9fd 259 SUPERFAMILY SSF52540 1 253 6.43E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS09680 884bc66221c6b1fb6e8711139f8b4354 91 Gene3D G3DSA:1.10.10.10 2 81 3.2E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS26855 824db28241f2d44f6f2c1bbefdb5f38e 404 Pfam PF07690 Major Facilitator Superfamily 21 326 3.7E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS26855 824db28241f2d44f6f2c1bbefdb5f38e 404 Gene3D G3DSA:1.20.1250.20 10 199 4.4E-26 T 28-03-2018 AL504_RS26855 824db28241f2d44f6f2c1bbefdb5f38e 404 Gene3D G3DSA:1.20.1250.20 202 395 8.4E-13 T 28-03-2018 AL504_RS26855 824db28241f2d44f6f2c1bbefdb5f38e 404 SUPERFAMILY SSF103473 10 388 6.02E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS30335 fb2119ae30fcd2cc50e341f6a6324717 255 SUPERFAMILY SSF51621 5 251 6.6E-78 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS30335 fb2119ae30fcd2cc50e341f6a6324717 255 Gene3D G3DSA:3.20.20.60 2 253 5.4E-39 T 28-03-2018 AL504_RS30335 fb2119ae30fcd2cc50e341f6a6324717 255 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 7 254 7.4E-138 T 28-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 AL504_RS30335 fb2119ae30fcd2cc50e341f6a6324717 255 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 243 1.1E-52 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL504_RS27310 19305bd99ed1db06287a680488964305 127 Gene3D G3DSA:2.30.30.40 2 64 2.0E-4 T 28-03-2018 AL504_RS27310 19305bd99ed1db06287a680488964305 127 PIRSF PIRSF034961 5 121 1.7E-30 T 28-03-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 AL504_RS27310 19305bd99ed1db06287a680488964305 127 SUPERFAMILY SSF50044 4 65 1.94E-6 T 28-03-2018 IPR001452 SH3 domain GO:0005515 AL504_RS27310 19305bd99ed1db06287a680488964305 127 Gene3D G3DSA:2.30.30.40 73 119 7.9E-4 T 28-03-2018 AL504_RS27310 19305bd99ed1db06287a680488964305 127 SUPERFAMILY SSF50044 76 118 6.34E-5 T 28-03-2018 IPR001452 SH3 domain GO:0005515 AL504_RS01955 89192b4cb31bf96f77d2e5dbe7f597cd 328 Pfam PF13503 Domain of unknown function (DUF4123) 34 160 5.9E-11 T 28-03-2018 IPR025391 Domain of unknown function DUF4123 AL504_RS13945 5cad7a9eb890d6e54b47b2ca85724cab 382 Gene3D G3DSA:3.40.50.2300 281 364 3.4E-5 T 28-03-2018 AL504_RS13945 5cad7a9eb890d6e54b47b2ca85724cab 382 Gene3D G3DSA:3.40.50.2300 23 153 8.2E-11 T 28-03-2018 AL504_RS13945 5cad7a9eb890d6e54b47b2ca85724cab 382 Pfam PF13458 Periplasmic binding protein 24 362 1.5E-50 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS13945 5cad7a9eb890d6e54b47b2ca85724cab 382 SUPERFAMILY SSF53822 25 381 7.49E-72 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS13945 5cad7a9eb890d6e54b47b2ca85724cab 382 Gene3D G3DSA:3.40.50.2300 154 280 5.5E-28 T 28-03-2018 AL504_RS13195 af8b8649e7da562504a8a61020be8337 399 SUPERFAMILY SSF51338 2 52 7.98E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS13195 af8b8649e7da562504a8a61020be8337 399 SUPERFAMILY SSF51338 349 391 7.98E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS13195 af8b8649e7da562504a8a61020be8337 399 SUPERFAMILY SSF51556 52 358 4.92E-67 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS13195 af8b8649e7da562504a8a61020be8337 399 Pfam PF07969 Amidohydrolase family 154 388 1.2E-18 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS13195 af8b8649e7da562504a8a61020be8337 399 Gene3D G3DSA:3.20.20.140 62 349 1.2E-29 T 28-03-2018 AL504_RS13195 af8b8649e7da562504a8a61020be8337 399 Gene3D G3DSA:2.30.40.10 3 61 3.4E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 PIRSF PIRSF005962 45 459 8.8E-121 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 Gene3D G3DSA:3.40.630.10 39 305 3.2E-54 T 28-03-2018 AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 Gene3D G3DSA:3.40.630.10 306 462 7.4E-22 T 28-03-2018 AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 SUPERFAMILY SSF53187 48 262 1.06E-84 T 28-03-2018 AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 SUPERFAMILY SSF53187 364 455 1.06E-84 T 28-03-2018 AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 Pfam PF07687 Peptidase dimerisation domain 250 346 5.9E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 SUPERFAMILY SSF55031 249 356 4.06E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 60 441 1.5E-107 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AL504_RS29895 4d213977527cd302231ae54a4f85ac47 462 Pfam PF01546 Peptidase family M20/M25/M40 118 450 6.0E-32 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS13900 be9380f431cf773476078c48aec0e03c 514 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 20 211 1.2E-14 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AL504_RS13900 be9380f431cf773476078c48aec0e03c 514 Gene3D G3DSA:3.40.920.10 7 218 9.9E-37 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AL504_RS13900 be9380f431cf773476078c48aec0e03c 514 SUPERFAMILY SSF53323 13 233 6.8E-8 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AL504_RS25395 e4ef6cdf04243eb8e7fc4fa949e99a13 192 Pfam PF02417 Chromate transporter 21 178 5.1E-29 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL504_RS07670 3a6a8625bda340ae31f94f82992f18b3 100 Pfam PF01381 Helix-turn-helix 45 88 1.2E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS07670 3a6a8625bda340ae31f94f82992f18b3 100 SUPERFAMILY SSF47413 44 96 4.35E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS07670 3a6a8625bda340ae31f94f82992f18b3 100 Gene3D G3DSA:1.10.260.40 44 94 2.0E-10 T 28-03-2018 AL504_RS20215 5cf92fa59a9b93d4ee2f0c994ffe1665 258 Pfam PF04116 Fatty acid hydroxylase superfamily 105 234 1.1E-21 T 28-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL504_RS22010 07f113f4b17f821d0692d273f5a4fbf4 397 Gene3D G3DSA:2.40.50.100 171 381 9.7E-6 T 28-03-2018 AL504_RS22010 07f113f4b17f821d0692d273f5a4fbf4 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 297 1.5E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS22010 07f113f4b17f821d0692d273f5a4fbf4 397 SUPERFAMILY SSF111369 62 301 2.88E-62 T 28-03-2018 AL504_RS22010 07f113f4b17f821d0692d273f5a4fbf4 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 378 6.1E-86 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS22010 07f113f4b17f821d0692d273f5a4fbf4 397 Gene3D G3DSA:2.40.50.100 71 143 5.8E-18 T 28-03-2018 AL504_RS21830 8ba2432b00e6e417f973dbefe5ce9fb5 91 PIRSF PIRSF001486 1 91 3.0E-46 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AL504_RS21830 8ba2432b00e6e417f973dbefe5ce9fb5 91 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 1.6E-49 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AL504_RS21830 8ba2432b00e6e417f973dbefe5ce9fb5 91 SUPERFAMILY SSF54909 1 91 1.77E-38 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS21830 8ba2432b00e6e417f973dbefe5ce9fb5 91 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 6.0E-13 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AL504_RS21830 8ba2432b00e6e417f973dbefe5ce9fb5 91 Pfam PF02426 Muconolactone delta-isomerase 1 89 5.4E-42 T 28-03-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AL504_RS17305 1e61d7e919b6da67e7df5dfe366871f1 261 SUPERFAMILY SSF161098 58 243 3.14E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS17305 1e61d7e919b6da67e7df5dfe366871f1 261 Gene3D G3DSA:1.10.3720.10 11 256 2.7E-29 T 28-03-2018 AL504_RS17305 1e61d7e919b6da67e7df5dfe366871f1 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 252 3.4E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS22160 5027dff863ff886ad3fb19707bbcd098 880 Gene3D G3DSA:1.20.5.960 14 39 0.002 T 28-03-2018 AL504_RS22160 5027dff863ff886ad3fb19707bbcd098 880 SUPERFAMILY SSF50017 5 102 7.19E-5 T 28-03-2018 IPR008987 Baseplate structural protein Gp9/Gp10 GO:0019076|GO:0098025 AL504_RS22160 5027dff863ff886ad3fb19707bbcd098 880 Pfam PF13884 Chaperone of endosialidase 757 807 7.6E-7 T 28-03-2018 IPR030392 Intramolecular chaperone auto-processing domain AL504_RS22160 5027dff863ff886ad3fb19707bbcd098 880 Gene3D G3DSA:1.10.10.10 744 870 2.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25140 c754857fa6ec1e510200ee2b4e6964f8 337 PIRSF PIRSF017082 9 337 2.9E-88 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25140 c754857fa6ec1e510200ee2b4e6964f8 337 Gene3D G3DSA:3.40.190.10 137 263 4.3E-12 T 28-03-2018 AL504_RS25140 c754857fa6ec1e510200ee2b4e6964f8 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 332 1.2E-98 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25140 c754857fa6ec1e510200ee2b4e6964f8 337 SUPERFAMILY SSF53850 126 299 3.98E-13 T 28-03-2018 AL504_RS18875 3929ff56c56be52a5287cd828f02431d 561 Pfam PF03747 ADP-ribosylglycohydrolase 16 344 1.2E-33 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 AL504_RS18875 3929ff56c56be52a5287cd828f02431d 561 SUPERFAMILY SSF101478 290 366 8.89E-37 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 AL504_RS18875 3929ff56c56be52a5287cd828f02431d 561 SUPERFAMILY SSF101478 5 256 8.89E-37 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 AL504_RS18875 3929ff56c56be52a5287cd828f02431d 561 Gene3D G3DSA:1.10.4080.10 3 379 1.1E-48 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 Gene3D G3DSA:1.10.230.10 280 361 5.9E-9 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 PRINTS PR00143 Citrate synthase signature 362 376 8.0E-12 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 PRINTS PR00143 Citrate synthase signature 212 227 8.0E-12 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 PRINTS PR00143 Citrate synthase signature 234 262 8.0E-12 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 PRINTS PR00143 Citrate synthase signature 342 358 8.0E-12 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 Pfam PF00285 Citrate synthase, C-terminal domain 71 392 3.0E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 SUPERFAMILY SSF48256 32 400 5.36E-69 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 Gene3D G3DSA:1.10.580.10 76 279 1.7E-30 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 Pfam PF12728 Helix-turn-helix domain 4 55 8.9E-7 T 28-03-2018 AL504_RS02040 84d6d1e9a7cc9984cf2871cc8f0ed579 403 Gene3D G3DSA:1.10.10.10 4 64 1.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20355 15ee6c8a1b9505236d1e5aac7c74dd17 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 110 3.4E-9 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL504_RS20355 15ee6c8a1b9505236d1e5aac7c74dd17 334 SUPERFAMILY SSF55347 126 283 6.98E-16 T 28-03-2018 AL504_RS20355 15ee6c8a1b9505236d1e5aac7c74dd17 334 Gene3D G3DSA:3.40.50.720 1 129 2.2E-25 T 28-03-2018 AL504_RS20355 15ee6c8a1b9505236d1e5aac7c74dd17 334 SUPERFAMILY SSF51735 2 157 9.32E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS20355 15ee6c8a1b9505236d1e5aac7c74dd17 334 Gene3D G3DSA:3.30.360.10 130 334 2.6E-24 T 28-03-2018 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 SMART SM00304 157 209 6.1E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 428 1.8E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 SUPERFAMILY SSF47384 194 274 1.18E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 SUPERFAMILY SSF55874 265 427 1.09E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 Gene3D G3DSA:1.10.287.130 200 271 2.2E-8 T 28-03-2018 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 3.6E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 3.6E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 3.6E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 SMART SM00388 210 275 3.3E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 274 1.2E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 Gene3D G3DSA:3.30.565.10 284 430 1.8E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS04640 1a17fa397c9be7deffb4c4eb89355caa 430 SMART SM00387 320 430 1.2E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15815 0a4c7f954a8e195dd14d29d8b164a3f6 200 Gene3D G3DSA:3.40.50.1820 1 192 1.3E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15815 0a4c7f954a8e195dd14d29d8b164a3f6 200 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 191 1.8E-49 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL504_RS15815 0a4c7f954a8e195dd14d29d8b164a3f6 200 SUPERFAMILY SSF53474 2 190 5.5E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS31195 5fb7285316c606e19a5678274125b78d 187 SUPERFAMILY SSF48452 10 183 1.33E-63 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS31195 5fb7285316c606e19a5678274125b78d 187 Pfam PF06041 Bacterial protein of unknown function (DUF924) 16 184 2.7E-54 T 28-03-2018 IPR010323 Protein of unknown function DUF924 AL504_RS31195 5fb7285316c606e19a5678274125b78d 187 Gene3D G3DSA:1.25.40.10 88 186 3.2E-35 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS31195 5fb7285316c606e19a5678274125b78d 187 Gene3D G3DSA:1.20.58.320 7 87 2.1E-23 T 28-03-2018 AL504_RS13655 97976cdfa19b47f4f8278452a0fa84fe 70 Gene3D G3DSA:2.60.260.40 7 61 5.4E-18 T 28-03-2018 AL504_RS13655 97976cdfa19b47f4f8278452a0fa84fe 70 Pfam PF10276 Zinc-finger domain 23 58 1.3E-9 T 28-03-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS04105 80345a839c3ec679b2842051de3bb4e0 411 Gene3D G3DSA:3.40.190.10 125 325 1.4E-28 T 28-03-2018 AL504_RS04105 80345a839c3ec679b2842051de3bb4e0 411 SUPERFAMILY SSF53850 29 389 1.22E-44 T 28-03-2018 AL504_RS04105 80345a839c3ec679b2842051de3bb4e0 411 Pfam PF12849 PBP superfamily domain 22 350 3.5E-32 T 28-03-2018 IPR024370 PBP domain AL504_RS16360 bba48f0c760bf8e194fcca1a25f69874 485 SUPERFAMILY SSF75304 12 476 2.75E-114 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS16360 bba48f0c760bf8e194fcca1a25f69874 485 Gene3D G3DSA:3.90.1300.10 13 480 9.8E-124 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS16360 bba48f0c760bf8e194fcca1a25f69874 485 ProSitePatterns PS00571 Amidases signature. 164 195 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS16360 bba48f0c760bf8e194fcca1a25f69874 485 Pfam PF01425 Amidase 33 466 7.4E-97 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS04770 c93c15dfefe2ceeec6cd9c1ad2639727 258 SMART SM00382 33 218 9.8E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS04770 c93c15dfefe2ceeec6cd9c1ad2639727 258 Pfam PF00005 ABC transporter 25 168 3.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS04770 c93c15dfefe2ceeec6cd9c1ad2639727 258 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS04770 c93c15dfefe2ceeec6cd9c1ad2639727 258 Gene3D G3DSA:3.40.50.300 1 255 1.5E-70 T 28-03-2018 AL504_RS04770 c93c15dfefe2ceeec6cd9c1ad2639727 258 SUPERFAMILY SSF52540 4 243 4.03E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS28930 11a71e31328673f7579de29855b7dbae 200 Gene3D G3DSA:3.40.50.880 4 200 9.7E-4 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS09695 3a2b4297aba79b61c09a7354172834e0 228 SUPERFAMILY SSF52980 107 184 6.43E-8 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS09695 3a2b4297aba79b61c09a7354172834e0 228 Gene3D G3DSA:3.40.960.10 107 193 2.0E-15 T 28-03-2018 AL504_RS09695 3a2b4297aba79b61c09a7354172834e0 228 Pfam PF04480 Protein of unknown function (DUF559) 110 178 2.3E-9 T 28-03-2018 IPR007569 Domain of unknown function DUF559 AL504_RS22545 330c2c003667122af3e25d051b37a2af 518 Pfam PF05681 Fumarate hydratase (Fumerase) 11 289 9.4E-93 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL504_RS22545 330c2c003667122af3e25d051b37a2af 518 Gene3D G3DSA:3.20.130.10 320 493 1.1E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS22545 330c2c003667122af3e25d051b37a2af 518 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 331 491 1.2E-47 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS22545 330c2c003667122af3e25d051b37a2af 518 SUPERFAMILY SSF117457 323 492 3.27E-60 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS22545 330c2c003667122af3e25d051b37a2af 518 Pfam PF05683 Fumarase C-terminus 293 493 5.1E-77 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL504_RS22545 330c2c003667122af3e25d051b37a2af 518 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 288 3.5E-58 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL504_RS22545 330c2c003667122af3e25d051b37a2af 518 PIRSF PIRSF001394 1 508 8.5E-194 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AL504_RS27405 c1598a0cf05507ce00e1241e7ec2fbc9 301 Gene3D G3DSA:1.10.3720.10 28 301 4.4E-40 T 28-03-2018 AL504_RS27405 c1598a0cf05507ce00e1241e7ec2fbc9 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 58 1.9E-5 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS27405 c1598a0cf05507ce00e1241e7ec2fbc9 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 300 2.1E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27405 c1598a0cf05507ce00e1241e7ec2fbc9 301 SUPERFAMILY SSF161098 94 283 1.01E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS09530 f31a23fc0144bbb5a063db1e9be1be3b 77 Gene3D G3DSA:1.10.10.620 2 63 2.4E-8 T 28-03-2018 AL504_RS12200 0b059c87afd99b4dcd2110f0b2b1e84b 217 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 22 216 20.389 T 28-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AL504_RS12200 0b059c87afd99b4dcd2110f0b2b1e84b 217 Pfam PF01794 Ferric reductase like transmembrane component 64 177 2.5E-16 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain AL504_RS09705 b881087796d8217b7d8b7b8ef11fcd45 251 Pfam PF11417 Loader and inhibitor of phage G40P 32 67 2.8E-4 T 28-03-2018 IPR024424 Replicative helicase inhibitor G39P, N-terminal AL504_RS09705 b881087796d8217b7d8b7b8ef11fcd45 251 Gene3D G3DSA:1.10.8.200 8 67 1.7E-12 T 28-03-2018 AL504_RS31005 d75f5bb22ee819ead26bb029ce562d5b 1059 Pfam PF13550 Putative phage tail protein 369 529 2.8E-23 T 28-03-2018 IPR032876 Tip attachment protein J AL504_RS31005 d75f5bb22ee819ead26bb029ce562d5b 1059 SUPERFAMILY SSF49265 673 759 8.66E-6 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 AL504_RS31005 d75f5bb22ee819ead26bb029ce562d5b 1059 Pfam PF09327 Domain of unknown function (DUF1983) 905 982 1.8E-19 T 28-03-2018 IPR015406 Domain of unknown function DUF1983 AL504_RS31005 d75f5bb22ee819ead26bb029ce562d5b 1059 Gene3D G3DSA:2.60.40.10 673 863 9.7E-15 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS16785 de0dc3354ae60426ffe0f4aeb944f556 246 SUPERFAMILY SSF52096 5 246 3.95E-65 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS16785 de0dc3354ae60426ffe0f4aeb944f556 246 Gene3D G3DSA:1.10.12.10 212 246 1.2E-15 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS16785 de0dc3354ae60426ffe0f4aeb944f556 246 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 244 4.2E-39 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS16785 de0dc3354ae60426ffe0f4aeb944f556 246 Gene3D G3DSA:3.90.226.10 4 211 9.5E-55 T 28-03-2018 AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 SUPERFAMILY SSF51735 9 234 1.84E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 Pfam PF00106 short chain dehydrogenase 13 197 8.2E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 Gene3D G3DSA:3.40.50.720 8 269 4.9E-53 T 28-03-2018 AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.3E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.3E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.3E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.3E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.3E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 8.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS16870 08184af3e567507a732c8e9c5b66aa76 278 PIRSF PIRSF000126 1 269 5.2E-72 T 28-03-2018 AL504_RS25915 50ed36d627d4e3f075b1f244d72b4fd2 163 Gene3D G3DSA:3.30.450.40 7 160 8.5E-9 T 28-03-2018 IPR029016 GAF domain-like AL504_RS25915 50ed36d627d4e3f075b1f244d72b4fd2 163 SUPERFAMILY SSF55781 26 144 1.77E-9 T 28-03-2018 IPR029016 GAF domain-like AL504_RS21835 b806f7bc559fd63d5dd4ef3283721a56 214 SUPERFAMILY SSF100950 6 213 1.26E-65 T 28-03-2018 AL504_RS21835 b806f7bc559fd63d5dd4ef3283721a56 214 Gene3D G3DSA:3.40.1080.10 5 214 3.6E-58 T 28-03-2018 AL504_RS21835 b806f7bc559fd63d5dd4ef3283721a56 214 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 6 210 8.6E-90 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AL504_RS21835 b806f7bc559fd63d5dd4ef3283721a56 214 Pfam PF01144 Coenzyme A transferase 8 184 1.3E-36 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS21835 b806f7bc559fd63d5dd4ef3283721a56 214 SMART SM00882 8 205 4.6E-66 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS22815 596224636bfb80319097edd40b8836ee 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 5 247 6.7E-102 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22815 596224636bfb80319097edd40b8836ee 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 1.4E-60 T 28-03-2018 AL504_RS22815 596224636bfb80319097edd40b8836ee 248 SUPERFAMILY SSF51735 4 247 8.89E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS22815 596224636bfb80319097edd40b8836ee 248 Gene3D G3DSA:3.40.50.720 45 248 1.8E-64 T 28-03-2018 AL504_RS22815 596224636bfb80319097edd40b8836ee 248 Gene3D G3DSA:3.40.50.720 1 44 1.8E-7 T 28-03-2018 AL504_RS22815 596224636bfb80319097edd40b8836ee 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 2.5E-6 T 28-03-2018 AL504_RS19395 c8138e8cdf4f0c022357730c2cbcb3a3 304 Gene3D G3DSA:3.60.130.10 20 304 4.3E-68 T 28-03-2018 AL504_RS19395 c8138e8cdf4f0c022357730c2cbcb3a3 304 SUPERFAMILY SSF51197 24 304 3.57E-84 T 28-03-2018 AL504_RS19395 c8138e8cdf4f0c022357730c2cbcb3a3 304 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 26 297 4.1E-64 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AL504_RS11505 28fd116d0546a9baf14ddd7040f84dca 156 Pfam PF08909 Domain of unknown function (DUF1854) 26 155 1.2E-52 T 28-03-2018 IPR015005 Domain of unknown function DUF1854 AL504_RS20470 83dc0a9bf337dd257b03d9e1cd81de58 377 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 140 374 4.8E-66 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AL504_RS20470 83dc0a9bf337dd257b03d9e1cd81de58 377 Pfam PF02405 Permease MlaE 161 370 1.8E-66 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 9 686 37.452 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 Pfam PF13361 UvrD-like helicase C-terminal domain 276 636 4.5E-60 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 SUPERFAMILY SSF52540 5 656 2.15E-150 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 Gene3D G3DSA:3.40.50.300 148 281 5.5E-26 T 28-03-2018 AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 Gene3D G3DSA:3.40.50.300 1 147 3.1E-25 T 28-03-2018 AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 Gene3D G3DSA:1.10.486.10 382 562 7.9E-34 T 28-03-2018 AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 270 1.0E-65 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL504_RS16890 9446777f547fef26cf2f57a31026ad40 687 Gene3D G3DSA:3.40.50.300 282 381 4.2E-26 T 28-03-2018 AL504_RS17330 b23582f0af3cd92355f09a983ccb65f0 456 Gene3D G3DSA:3.20.20.30 2 455 2.4E-115 T 28-03-2018 AL504_RS17330 b23582f0af3cd92355f09a983ccb65f0 456 Pfam PF00296 Luciferase-like monooxygenase 27 386 3.5E-60 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS17330 b23582f0af3cd92355f09a983ccb65f0 456 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 433 9.6E-171 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AL504_RS17330 b23582f0af3cd92355f09a983ccb65f0 456 PIRSF PIRSF000337 3 445 3.8E-145 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AL504_RS17330 b23582f0af3cd92355f09a983ccb65f0 456 SUPERFAMILY SSF51679 3 437 1.28E-126 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL504_RS07785 13f5c338ad389f5fa661b7675ff08226 210 PIRSF PIRSF006324 1 209 3.9E-46 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS07785 13f5c338ad389f5fa661b7675ff08226 210 Pfam PF01810 LysE type translocator 17 207 1.5E-30 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS03575 e743101218103e3aeeb2289e0ada7e9a 687 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 50 687 4.9E-274 T 28-03-2018 IPR010100 TonB-dependent copper receptor AL504_RS03575 e743101218103e3aeeb2289e0ada7e9a 687 Gene3D G3DSA:2.40.170.20 162 686 1.8E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03575 e743101218103e3aeeb2289e0ada7e9a 687 Pfam PF00593 TonB dependent receptor 204 686 7.5E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS03575 e743101218103e3aeeb2289e0ada7e9a 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 149 3.5E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03575 e743101218103e3aeeb2289e0ada7e9a 687 SUPERFAMILY SSF56935 35 686 6.72E-94 T 28-03-2018 AL504_RS03575 e743101218103e3aeeb2289e0ada7e9a 687 Gene3D G3DSA:2.170.130.10 26 154 5.9E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS03005 5ab724a7a7c4da52b01ab00f11c9cf02 115 SUPERFAMILY SSF54593 12 114 3.95E-15 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS03005 5ab724a7a7c4da52b01ab00f11c9cf02 115 Gene3D G3DSA:3.10.180.10 1 115 1.1E-12 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS20870 d9673010be377e050bdb437e4fab63f9 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 295 6.5E-30 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS20870 d9673010be377e050bdb437e4fab63f9 309 Gene3D G3DSA:1.10.3470.10 1 296 1.6E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS01395 9cac1e4be7e3bf0d193c26e4d4a724cc 305 Gene3D G3DSA:3.40.190.10 92 189 5.5E-16 T 28-03-2018 AL504_RS01395 9cac1e4be7e3bf0d193c26e4d4a724cc 305 Pfam PF03466 LysR substrate binding domain 101 300 5.6E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01395 9cac1e4be7e3bf0d193c26e4d4a724cc 305 Gene3D G3DSA:3.40.190.10 190 272 2.8E-13 T 28-03-2018 AL504_RS01395 9cac1e4be7e3bf0d193c26e4d4a724cc 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01395 9cac1e4be7e3bf0d193c26e4d4a724cc 305 SUPERFAMILY SSF53850 92 297 4.34E-37 T 28-03-2018 AL504_RS01395 9cac1e4be7e3bf0d193c26e4d4a724cc 305 Gene3D G3DSA:1.10.10.10 1 91 2.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01395 9cac1e4be7e3bf0d193c26e4d4a724cc 305 SUPERFAMILY SSF46785 6 85 1.56E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.73 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.5E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.5E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.5E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 SUPERFAMILY SSF143034 2 64 1.7E-23 T 28-03-2018 AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 4.0E-27 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL504_RS08360 70f80437e0bc2f11cb47f26e47cf541c 65 Pfam PF01632 Ribosomal protein L35 2 62 1.6E-25 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS28560 fe2e939aad1a56c87428fa022e4fdea7 502 Gene3D G3DSA:1.10.3720.10 158 469 5.8E-32 T 28-03-2018 AL504_RS28560 fe2e939aad1a56c87428fa022e4fdea7 502 SUPERFAMILY SSF161098 245 468 5.89E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS28560 fe2e939aad1a56c87428fa022e4fdea7 502 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 264 469 9.8E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS14040 30377e2b15d35514be528a3542799480 103 Pfam PF00355 Rieske [2Fe-2S] domain 4 91 3.8E-19 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS14040 30377e2b15d35514be528a3542799480 103 SUPERFAMILY SSF50022 3 103 5.24E-32 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS14040 30377e2b15d35514be528a3542799480 103 Gene3D G3DSA:2.102.10.10 2 103 1.7E-27 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS25175 0afa23dd68172d3a1c83982f4a0ccf68 352 Gene3D G3DSA:3.40.1570.10 3 196 1.0E-50 T 28-03-2018 AL504_RS25175 0afa23dd68172d3a1c83982f4a0ccf68 352 Gene3D G3DSA:3.40.1570.10 197 347 1.0E-53 T 28-03-2018 AL504_RS25175 0afa23dd68172d3a1c83982f4a0ccf68 352 SUPERFAMILY SSF144064 18 345 7.85E-122 T 28-03-2018 AL504_RS25175 0afa23dd68172d3a1c83982f4a0ccf68 352 Pfam PF05171 Haemin-degrading HemS.ChuX domain 213 342 5.3E-42 T 28-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AL504_RS25175 0afa23dd68172d3a1c83982f4a0ccf68 352 Pfam PF05171 Haemin-degrading HemS.ChuX domain 41 165 9.4E-38 T 28-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AL504_RS19045 f2578c3a1c46dc76749ed23f69a405a0 402 Pfam PF07690 Major Facilitator Superfamily 230 395 4.2E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS19045 f2578c3a1c46dc76749ed23f69a405a0 402 SUPERFAMILY SSF103473 24 398 1.96E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS19045 f2578c3a1c46dc76749ed23f69a405a0 402 Gene3D G3DSA:1.20.1250.20 18 204 1.3E-15 T 28-03-2018 AL504_RS19045 f2578c3a1c46dc76749ed23f69a405a0 402 Gene3D G3DSA:1.20.1250.20 218 398 9.5E-17 T 28-03-2018 AL504_RS02140 fcfffaa2a4adb31e87b0ebb7be53f3f1 402 Gene3D G3DSA:1.20.1250.20 14 201 1.2E-21 T 28-03-2018 AL504_RS02140 fcfffaa2a4adb31e87b0ebb7be53f3f1 402 SUPERFAMILY SSF103473 13 396 1.19E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS02140 fcfffaa2a4adb31e87b0ebb7be53f3f1 402 Gene3D G3DSA:1.20.1250.20 219 400 3.0E-17 T 28-03-2018 AL504_RS02140 fcfffaa2a4adb31e87b0ebb7be53f3f1 402 Pfam PF07690 Major Facilitator Superfamily 27 340 3.3E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS08480 69e58c2fa967d7fc8534b7dd48d8454c 279 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 50 3.6E-7 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS08480 69e58c2fa967d7fc8534b7dd48d8454c 279 Gene3D G3DSA:1.10.3720.10 1 264 2.6E-40 T 28-03-2018 AL504_RS08480 69e58c2fa967d7fc8534b7dd48d8454c 279 SUPERFAMILY SSF161098 70 256 4.19E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS08480 69e58c2fa967d7fc8534b7dd48d8454c 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 2.7E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29445 0773a3962c66c38678265f64a6e3d405 219 Gene3D G3DSA:3.90.470.20 15 113 2.4E-10 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS29445 0773a3962c66c38678265f64a6e3d405 219 SUPERFAMILY SSF56214 102 184 1.08E-11 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS29445 0773a3962c66c38678265f64a6e3d405 219 PRINTS PR01399 Enterobactin synthetase component D signature 39 59 2.8E-14 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL504_RS29445 0773a3962c66c38678265f64a6e3d405 219 PRINTS PR01399 Enterobactin synthetase component D signature 69 87 2.8E-14 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL504_RS29445 0773a3962c66c38678265f64a6e3d405 219 PRINTS PR01399 Enterobactin synthetase component D signature 145 161 2.8E-14 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL504_RS29445 0773a3962c66c38678265f64a6e3d405 219 Gene3D G3DSA:3.90.470.20 114 202 1.8E-9 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS29445 0773a3962c66c38678265f64a6e3d405 219 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 104 183 6.2E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL504_RS02300 7fb49d715fbd1662def57ddef4f66369 258 Gene3D G3DSA:3.30.930.10 1 250 6.7E-58 T 28-03-2018 AL504_RS02300 7fb49d715fbd1662def57ddef4f66369 258 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 172 1.4E-6 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AL504_RS02300 7fb49d715fbd1662def57ddef4f66369 258 SUPERFAMILY SSF55681 4 254 3.55E-66 T 28-03-2018 AL504_RS00835 79d8662073a9e15503fc164f501d2d30 323 Gene3D G3DSA:3.40.190.10 122 218 3.1E-11 T 28-03-2018 AL504_RS00835 79d8662073a9e15503fc164f501d2d30 323 Gene3D G3DSA:3.40.50.2000 219 293 6.0E-5 T 28-03-2018 AL504_RS00835 79d8662073a9e15503fc164f501d2d30 323 PIRSF PIRSF017082 1 322 7.8E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00835 79d8662073a9e15503fc164f501d2d30 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 317 3.7E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00835 79d8662073a9e15503fc164f501d2d30 323 SUPERFAMILY SSF53850 114 283 3.26E-13 T 28-03-2018 AL504_RS26160 4fab5884c6d6a0c4abfdf2bbac34b00b 146 Gene3D G3DSA:3.10.129.10 1 144 5.9E-30 T 28-03-2018 AL504_RS26160 4fab5884c6d6a0c4abfdf2bbac34b00b 146 SUPERFAMILY SSF54637 2 141 1.1E-33 T 28-03-2018 IPR029069 HotDog domain AL504_RS26160 4fab5884c6d6a0c4abfdf2bbac34b00b 146 Pfam PF01575 MaoC like domain 15 109 2.1E-16 T 28-03-2018 IPR002539 MaoC-like domain AL504_RS25800 7e63c3364ee45c19b2a0af73d9052e3d 314 Gene3D G3DSA:3.40.50.10750 120 275 2.2E-44 T 28-03-2018 AL504_RS25800 7e63c3364ee45c19b2a0af73d9052e3d 314 Pfam PF01515 Phosphate acetyl/butaryl transferase 85 299 2.7E-43 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL504_RS25800 7e63c3364ee45c19b2a0af73d9052e3d 314 PIRSF PIRSF000428 6 305 7.3E-86 T 28-03-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL504_RS25800 7e63c3364ee45c19b2a0af73d9052e3d 314 SUPERFAMILY SSF53659 9 303 3.7E-68 T 28-03-2018 AL504_RS31115 b61847d98859244f1fb9b72a84c2711d 285 SUPERFAMILY SSF51569 6 279 2.38E-101 T 28-03-2018 AL504_RS31115 b61847d98859244f1fb9b72a84c2711d 285 Gene3D G3DSA:3.20.20.70 30 275 4.4E-65 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS31115 b61847d98859244f1fb9b72a84c2711d 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 278 49.707 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL504_RS31115 b61847d98859244f1fb9b72a84c2711d 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 276 8.2E-117 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL504_RS31115 b61847d98859244f1fb9b72a84c2711d 285 Pfam PF00793 DAHP synthetase I family 11 276 2.3E-66 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL504_RS14915 1d8e12cae1158b51b62899e738428967 154 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 145 1.9E-23 T 28-03-2018 IPR009936 Protein of unknown function DUF1468 AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 SUPERFAMILY SSF51445 507 584 1.21E-120 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 SUPERFAMILY SSF51445 145 478 1.21E-120 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 Pfam PF00128 Alpha amylase, catalytic domain 201 284 1.0E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 104 2.0E-16 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 SUPERFAMILY SSF51011 598 695 5.61E-15 T 28-03-2018 AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 SMART SM00642 193 577 1.8E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 Gene3D G3DSA:3.20.20.80 149 591 1.9E-105 T 28-03-2018 AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 694 1.4E-299 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 Gene3D G3DSA:2.60.40.10 11 147 2.3E-45 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 SUPERFAMILY SSF81296 12 158 1.48E-45 T 28-03-2018 IPR014756 Immunoglobulin E-set AL504_RS29050 1d14aca3dd6ed130c1f2d9791a3c8b3b 703 Gene3D G3DSA:2.60.40.1180 601 703 2.0E-18 T 28-03-2018 AL504_RS06500 3d6c751e9009d7779cb04c4d8dde6e99 129 SMART SM00448 6 120 1.5E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS06500 3d6c751e9009d7779cb04c4d8dde6e99 129 SUPERFAMILY SSF52172 4 125 1.57E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS06500 3d6c751e9009d7779cb04c4d8dde6e99 129 Gene3D G3DSA:3.40.50.2300 1 128 8.6E-37 T 28-03-2018 AL504_RS06500 3d6c751e9009d7779cb04c4d8dde6e99 129 Pfam PF00072 Response regulator receiver domain 8 120 1.3E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS30050 158f58c8baf56bdb83d9bbe2ff5b6613 191 Pfam PF13302 Acetyltransferase (GNAT) domain 20 156 1.6E-26 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS30050 158f58c8baf56bdb83d9bbe2ff5b6613 191 Gene3D G3DSA:3.40.630.30 6 184 1.1E-30 T 28-03-2018 AL504_RS30050 158f58c8baf56bdb83d9bbe2ff5b6613 191 SUPERFAMILY SSF55729 20 180 6.23E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS12380 d2397789793980a8018bbb285126e75b 198 Pfam PF02361 Cobalt transport protein 14 196 4.4E-15 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component AL504_RS01610 537e76b6f0aebb863e90bfbd8ca03537 216 Pfam PF00857 Isochorismatase family 32 204 2.7E-43 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS01610 537e76b6f0aebb863e90bfbd8ca03537 216 Gene3D G3DSA:3.40.50.850 27 216 2.2E-47 T 28-03-2018 AL504_RS01610 537e76b6f0aebb863e90bfbd8ca03537 216 SUPERFAMILY SSF52499 17 209 1.16E-53 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 Gene3D G3DSA:1.20.1250.20 269 475 1.2E-28 T 28-03-2018 AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 SUPERFAMILY SSF103473 28 216 5.23E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 SUPERFAMILY SSF103473 266 467 5.23E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 1.1E-6 T 28-03-2018 AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 418 437 1.1E-6 T 28-03-2018 AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 89 111 1.1E-6 T 28-03-2018 AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 Pfam PF07690 Major Facilitator Superfamily 33 427 7.5E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS20270 b83bad8fb70503ebc912eb7675a15c05 477 Gene3D G3DSA:1.20.1250.20 24 215 1.4E-29 T 28-03-2018 AL504_RS25555 81b673d20c360c3a25f18ef468448b69 352 Pfam PF00248 Aldo/keto reductase family 21 325 4.0E-64 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS25555 81b673d20c360c3a25f18ef468448b69 352 Gene3D G3DSA:3.20.20.100 7 331 2.7E-86 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS25555 81b673d20c360c3a25f18ef468448b69 352 SUPERFAMILY SSF51430 8 325 2.1E-88 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS09645 332c34fdbee29cec993ffcfe533ee539 350 PIRSF PIRSF034565 1 350 1.7E-170 T 28-03-2018 IPR017029 Putative phage head morphogenesis protein AL504_RS09645 332c34fdbee29cec993ffcfe533ee539 350 Pfam PF04233 Phage Mu protein F like protein 129 248 2.4E-6 T 28-03-2018 IPR006528 Phage head morphogenesis domain AL504_RS21880 cdcbd790fb789b7d4a10eefdc8f05d79 394 Gene3D G3DSA:1.20.1250.20 207 394 1.4E-4 T 28-03-2018 AL504_RS21880 cdcbd790fb789b7d4a10eefdc8f05d79 394 Gene3D G3DSA:1.20.1250.20 2 197 7.3E-19 T 28-03-2018 AL504_RS21880 cdcbd790fb789b7d4a10eefdc8f05d79 394 SUPERFAMILY SSF103473 4 390 1.7E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS21880 cdcbd790fb789b7d4a10eefdc8f05d79 394 Pfam PF07690 Major Facilitator Superfamily 21 265 2.8E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS17800 a546c5a3bb9a6965b9a85bf5dad2f017 66 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 1.5E-24 T 28-03-2018 IPR021313 Protein of unknown function DUF2909 AL504_RS25490 32ca0f60053b9e3a0a2fac9b0de004fd 294 Gene3D G3DSA:3.40.50.1820 48 289 1.1E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS25490 32ca0f60053b9e3a0a2fac9b0de004fd 294 Pfam PF01738 Dienelactone hydrolase family 65 289 7.3E-63 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL504_RS25490 32ca0f60053b9e3a0a2fac9b0de004fd 294 SUPERFAMILY SSF53474 55 289 1.28E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS21050 f8fafab26a2034bf35b40673cf5b53fa 164 Gene3D G3DSA:3.40.30.10 21 164 3.0E-35 T 28-03-2018 AL504_RS21050 f8fafab26a2034bf35b40673cf5b53fa 164 Pfam PF08534 Redoxin 25 149 1.3E-25 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL504_RS21050 f8fafab26a2034bf35b40673cf5b53fa 164 SUPERFAMILY SSF52833 21 162 6.14E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS14955 55e194a9242983f0be1ab9ca551a81bc 159 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 15 154 6.1E-20 T 28-03-2018 IPR009936 Protein of unknown function DUF1468 AL504_RS21930 f79f81edb13ff6496ef0f2b8a074b2b8 163 SUPERFAMILY SSF54593 13 150 5.5E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS21930 f79f81edb13ff6496ef0f2b8a074b2b8 163 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 145 1.8E-11 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS21930 f79f81edb13ff6496ef0f2b8a074b2b8 163 Gene3D G3DSA:3.10.180.10 11 156 9.7E-25 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS22785 f8df2408b68d7edbb3d33a8cac78d21a 478 PIRSF PIRSF006446 1 461 6.9E-216 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL504_RS22785 f8df2408b68d7edbb3d33a8cac78d21a 478 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 436 1.2E-165 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL504_RS11535 fd2ac7a93a4b0c083f3dad0e76d7eced 112 SMART SM00749 44 107 5.3E-5 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL504_RS11535 fd2ac7a93a4b0c083f3dad0e76d7eced 112 Pfam PF04972 BON domain 39 106 2.9E-18 T 28-03-2018 IPR007055 BON domain AL504_RS00675 8a70051f10f55b624982278dc7dc18fd 459 Pfam PF03729 Short repeat of unknown function (DUF308) 101 147 3.9E-4 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane AL504_RS14300 5dddee7c4be92cd4f03240d8dc5bc90e 317 Pfam PF03060 Nitronate monooxygenase 10 305 6.3E-26 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS14300 5dddee7c4be92cd4f03240d8dc5bc90e 317 SUPERFAMILY SSF51412 7 292 4.21E-60 T 28-03-2018 AL504_RS14300 5dddee7c4be92cd4f03240d8dc5bc90e 317 Gene3D G3DSA:3.20.20.70 4 315 1.3E-38 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS16825 5cc28e5807dccd5d3b4ea02a00be1366 547 PIRSF PIRSF002741 1 538 9.8E-85 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS16825 5cc28e5807dccd5d3b4ea02a00be1366 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 461 5.4E-82 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS16825 5cc28e5807dccd5d3b4ea02a00be1366 547 Gene3D G3DSA:3.40.190.10 199 321 5.6E-32 T 28-03-2018 AL504_RS16825 5cc28e5807dccd5d3b4ea02a00be1366 547 Gene3D G3DSA:3.10.105.10 322 517 4.9E-51 T 28-03-2018 AL504_RS16825 5cc28e5807dccd5d3b4ea02a00be1366 547 SUPERFAMILY SSF53850 32 529 3.8E-119 T 28-03-2018 AL504_RS16825 5cc28e5807dccd5d3b4ea02a00be1366 547 Gene3D G3DSA:3.90.76.10 43 176 3.5E-27 T 28-03-2018 AL504_RS30310 8aef4f4f19aa3e2f1208a26d966cea66 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 328 2.9E-83 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS30310 8aef4f4f19aa3e2f1208a26d966cea66 333 Gene3D G3DSA:3.40.190.10 141 304 6.0E-9 T 28-03-2018 AL504_RS30310 8aef4f4f19aa3e2f1208a26d966cea66 333 PIRSF PIRSF017082 3 332 9.5E-82 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS30310 8aef4f4f19aa3e2f1208a26d966cea66 333 SUPERFAMILY SSF53850 121 287 3.1E-11 T 28-03-2018 AL504_RS29085 afec92f3fc623cf4a90ae5ec93db911f 253 Gene3D G3DSA:3.60.10.10 2 252 1.0E-30 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS29085 afec92f3fc623cf4a90ae5ec93db911f 253 SUPERFAMILY SSF56219 8 250 1.31E-48 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS29085 afec92f3fc623cf4a90ae5ec93db911f 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 244 8.6E-18 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS09220 3a70d06c0ea1c66a75b01ff1bcc7e02e 145 Pfam PF03524 Conjugal transfer protein 37 113 7.5E-14 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AL504_RS20875 8732145423aa9945fd785a10a1d6784c 265 Gene3D G3DSA:3.40.50.300 1 264 6.3E-54 T 28-03-2018 AL504_RS20875 8732145423aa9945fd785a10a1d6784c 265 Pfam PF00005 ABC transporter 30 191 4.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS20875 8732145423aa9945fd785a10a1d6784c 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 262 1.6E-9 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS20875 8732145423aa9945fd785a10a1d6784c 265 SUPERFAMILY SSF52540 13 262 3.92E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS20875 8732145423aa9945fd785a10a1d6784c 265 SMART SM00382 39 240 1.8E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS10985 1b85fcfb4138feb304f8c16cfb7f7945 293 Pfam PF01435 Peptidase family M48 81 289 2.8E-38 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL504_RS10985 1b85fcfb4138feb304f8c16cfb7f7945 293 Gene3D G3DSA:3.30.2010.10 73 164 7.3E-21 T 28-03-2018 AL504_RS10985 1b85fcfb4138feb304f8c16cfb7f7945 293 Hamap MF_00188 Protease HtpX [htpX]. 1 290 24.467 T 28-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AL504_RS09165 19acaa8d2dcf004a75be5af6be711852 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 383 398 5.2E-7 T 28-03-2018 AL504_RS09165 19acaa8d2dcf004a75be5af6be711852 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 33 55 5.2E-7 T 28-03-2018 AL504_RS09165 19acaa8d2dcf004a75be5af6be711852 429 Gene3D G3DSA:3.50.50.60 20 424 3.1E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS09165 19acaa8d2dcf004a75be5af6be711852 429 Pfam PF01266 FAD dependent oxidoreductase 33 385 7.7E-58 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS09165 19acaa8d2dcf004a75be5af6be711852 429 SUPERFAMILY SSF51905 32 257 6.22E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS09165 19acaa8d2dcf004a75be5af6be711852 429 SUPERFAMILY SSF51905 349 414 6.22E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16695 70fe93c610d0834687248058cbcedda4 230 Gene3D G3DSA:3.40.50.300 1 228 1.1E-47 T 28-03-2018 AL504_RS16695 70fe93c610d0834687248058cbcedda4 230 SMART SM00382 26 207 2.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16695 70fe93c610d0834687248058cbcedda4 230 SUPERFAMILY SSF52540 2 227 2.62E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS16695 70fe93c610d0834687248058cbcedda4 230 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS16695 70fe93c610d0834687248058cbcedda4 230 Pfam PF00005 ABC transporter 20 158 2.3E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS10545 2799cb2ef6ba97b890f6fa9541455e06 127 SUPERFAMILY SSF81273 84 126 7.45E-11 T 28-03-2018 AL504_RS10545 2799cb2ef6ba97b890f6fa9541455e06 127 SMART SM00528 81 125 2.2E-19 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL504_RS10545 2799cb2ef6ba97b890f6fa9541455e06 127 Pfam PF00816 H-NS histone family 12 118 2.6E-24 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL504_RS10545 2799cb2ef6ba97b890f6fa9541455e06 127 Gene3D G3DSA:4.10.430.10 87 125 8.8E-17 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL504_RS04615 6d7c6d738ce2dec7b9c17808187d6d36 293 SUPERFAMILY SSF161098 55 281 4.06E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04615 6d7c6d738ce2dec7b9c17808187d6d36 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 292 8.3E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04615 6d7c6d738ce2dec7b9c17808187d6d36 293 Gene3D G3DSA:1.10.3720.10 12 293 1.8E-44 T 28-03-2018 AL504_RS15540 a1943b8a69531cac2396caf31ac60257 189 Gene3D G3DSA:3.40.50.850 1 189 3.2E-34 T 28-03-2018 AL504_RS15540 a1943b8a69531cac2396caf31ac60257 189 Pfam PF00857 Isochorismatase family 4 149 7.5E-25 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS15540 a1943b8a69531cac2396caf31ac60257 189 SUPERFAMILY SSF52499 2 186 4.58E-32 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS03295 f7b41dbf59a0a01bbd32c52f03692ed5 413 SUPERFAMILY SSF103473 4 400 5.62E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS03295 f7b41dbf59a0a01bbd32c52f03692ed5 413 Gene3D G3DSA:1.20.1250.20 11 202 1.8E-29 T 28-03-2018 AL504_RS03295 f7b41dbf59a0a01bbd32c52f03692ed5 413 Pfam PF07690 Major Facilitator Superfamily 22 365 9.7E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS03295 f7b41dbf59a0a01bbd32c52f03692ed5 413 Gene3D G3DSA:1.20.1250.20 208 406 2.5E-12 T 28-03-2018 AL504_RS18690 363e8b03fe94f60e4d658f5aa3fb3e53 624 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 19 614 0.0 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AL504_RS18690 363e8b03fe94f60e4d658f5aa3fb3e53 624 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 23 612 3.3E-247 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AL504_RS18690 363e8b03fe94f60e4d658f5aa3fb3e53 624 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 15 616 44.424 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AL504_RS18690 363e8b03fe94f60e4d658f5aa3fb3e53 624 PIRSF PIRSF000719 15 89 4.1E-16 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AL504_RS18690 363e8b03fe94f60e4d658f5aa3fb3e53 624 PIRSF PIRSF000719 106 618 5.3E-206 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AL504_RS26530 be46964090e91a32211d328d972b0a5e 83 Pfam PF13991 BssS protein family 14 74 4.4E-10 T 28-03-2018 IPR025730 Biofilm regulator BssS AL504_RS24425 611a12d874db518dd7c438a2e85c8229 119 SUPERFAMILY SSF55961 9 101 4.08E-16 T 28-03-2018 AL504_RS24425 611a12d874db518dd7c438a2e85c8229 119 Gene3D G3DSA:3.30.530.20 59 119 5.9E-7 T 28-03-2018 IPR023393 START-like domain AL504_RS24425 611a12d874db518dd7c438a2e85c8229 119 Gene3D G3DSA:3.30.530.20 3 58 4.1E-8 T 28-03-2018 IPR023393 START-like domain AL504_RS14120 bb1a20a73ded4517ea0a0e00d4fc58fa 140 Gene3D G3DSA:3.10.450.50 8 131 1.1E-15 T 28-03-2018 AL504_RS14120 bb1a20a73ded4517ea0a0e00d4fc58fa 140 Pfam PF13577 SnoaL-like domain 8 128 1.9E-9 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS14120 bb1a20a73ded4517ea0a0e00d4fc58fa 140 SUPERFAMILY SSF54427 9 130 7.07E-14 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS02690 e1df610157c52f4383f1c040e0fbc0df 215 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 157 1.2E-36 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AL504_RS02690 e1df610157c52f4383f1c040e0fbc0df 215 Gene3D G3DSA:1.10.3480.10 1 176 7.4E-34 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL504_RS02690 e1df610157c52f4383f1c040e0fbc0df 215 Pfam PF02613 Nitrate reductase delta subunit 33 155 1.8E-12 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL504_RS02690 e1df610157c52f4383f1c040e0fbc0df 215 SUPERFAMILY SSF89155 2 159 1.7E-35 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL504_RS26775 97ed8fe50bff1220afb220e79a6cd8ce 237 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 12 193 8.3E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS26775 97ed8fe50bff1220afb220e79a6cd8ce 237 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 11 207 1.3E-41 T 28-03-2018 IPR006328 L-2-Haloacid dehalogenase GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 AL504_RS26775 97ed8fe50bff1220afb220e79a6cd8ce 237 SUPERFAMILY SSF56784 9 232 2.76E-42 T 28-03-2018 IPR023214 HAD-like domain AL504_RS26775 97ed8fe50bff1220afb220e79a6cd8ce 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 104 203 1.2E-13 T 28-03-2018 IPR023214 HAD-like domain AL504_RS26775 97ed8fe50bff1220afb220e79a6cd8ce 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 183 4.7E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL504_RS26775 97ed8fe50bff1220afb220e79a6cd8ce 237 Gene3D G3DSA:3.40.50.1000 89 235 3.7E-27 T 28-03-2018 IPR023214 HAD-like domain AL504_RS08160 1cff24bde238b08bae16a8dd4b803b51 328 PIRSF PIRSF026166 1 328 2.7E-118 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter AL504_RS08160 1cff24bde238b08bae16a8dd4b803b51 328 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 7 314 3.2E-92 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter AL504_RS11090 6699578f983a2d6fbdda7423db5b311d 411 Gene3D G3DSA:1.10.10.10 85 177 7.1E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11090 6699578f983a2d6fbdda7423db5b311d 411 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 14 172 6.4E-30 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AL504_RS11090 6699578f983a2d6fbdda7423db5b311d 411 SUPERFAMILY SSF46785 85 160 5.74E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11090 6699578f983a2d6fbdda7423db5b311d 411 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 168 4.2E-45 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AL504_RS11090 6699578f983a2d6fbdda7423db5b311d 411 Gene3D G3DSA:1.10.10.10 1 84 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11090 6699578f983a2d6fbdda7423db5b311d 411 SUPERFAMILY SSF46785 2 82 2.09E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS10245 8b4f65cb177e1bb4c3160e7a3889c795 90 Pfam PF08681 Protein of unknown function (DUF1778) 50 86 2.4E-6 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 AL504_RS10245 8b4f65cb177e1bb4c3160e7a3889c795 90 Gene3D G3DSA:1.20.890.30 51 86 3.3E-14 T 28-03-2018 AL504_RS21500 8265c991c00d1ebee3aff16a23c37352 481 Pfam PF03606 C4-dicarboxylate anaerobic carrier 97 423 3.9E-9 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 257 526 1.6E-81 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 Pfam PF00263 Bacterial type II and III secretion system protein 368 526 9.5E-41 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 Pfam PF03958 Bacterial type II/III secretion system short domain 167 295 1.1E-15 T 28-03-2018 IPR005644 NolW-like AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 415 430 6.1E-31 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 505 524 6.1E-31 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 381 400 6.1E-31 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 179 196 6.1E-31 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL504_RS15305 2f35c9a565c3b1e24dd7310af4d98ba7 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 299 319 6.1E-31 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL504_RS10700 2a304cfd439a22cd289c98724ef88ba6 200 Pfam PF11136 Protein of unknown function (DUF2889) 14 138 1.0E-44 T 28-03-2018 IPR021312 Protein of unknown function DUF2889 AL504_RS09290 39993de1f88ff2cffbfb50d152731cbc 411 Pfam PF04235 Protein of unknown function (DUF418) 237 397 4.8E-43 T 28-03-2018 IPR007349 Domain of unknown function DUF418 AL504_RS31045 461cbb60b67bcbbc0c98b10d6099edce 221 Gene3D G3DSA:3.90.1680.10 1 221 5.8E-39 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AL504_RS31045 461cbb60b67bcbbc0c98b10d6099edce 221 Pfam PF02586 SOS response associated peptidase (SRAP) 1 218 2.0E-26 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AL504_RS31045 461cbb60b67bcbbc0c98b10d6099edce 221 SUPERFAMILY SSF143081 2 218 4.45E-51 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AL504_RS12585 df17808d4cd86a7f25ef09e7c1ceef8c 148 Gene3D G3DSA:3.10.129.10 10 148 3.5E-24 T 28-03-2018 AL504_RS12585 df17808d4cd86a7f25ef09e7c1ceef8c 148 Pfam PF03061 Thioesterase superfamily 61 121 3.4E-8 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS12585 df17808d4cd86a7f25ef09e7c1ceef8c 148 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 119 6.2E-11 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL504_RS12585 df17808d4cd86a7f25ef09e7c1ceef8c 148 SUPERFAMILY SSF54637 17 145 3.2E-22 T 28-03-2018 IPR029069 HotDog domain AL504_RS11140 bc249b97bc7cba4dee9d195fabf22868 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 213 1.0E-92 T 28-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AL504_RS11140 bc249b97bc7cba4dee9d195fabf22868 214 Pfam PF13410 Glutathione S-transferase, C-terminal domain 136 176 3.1E-6 T 28-03-2018 AL504_RS11140 bc249b97bc7cba4dee9d195fabf22868 214 SUPERFAMILY SSF52833 1 86 9.97E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS11140 bc249b97bc7cba4dee9d195fabf22868 214 Gene3D G3DSA:3.40.30.10 1 90 3.6E-29 T 28-03-2018 AL504_RS11140 bc249b97bc7cba4dee9d195fabf22868 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 81 1.0E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL504_RS11140 bc249b97bc7cba4dee9d195fabf22868 214 Gene3D G3DSA:1.20.1050.10 91 214 3.6E-26 T 28-03-2018 AL504_RS11140 bc249b97bc7cba4dee9d195fabf22868 214 SUPERFAMILY SSF47616 82 212 4.32E-33 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL504_RS16690 6aed9767622333298cdddfb880bcec5b 345 SUPERFAMILY SSF56317 6 310 2.75E-68 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS16690 6aed9767622333298cdddfb880bcec5b 345 Pfam PF00795 Carbon-nitrogen hydrolase 8 287 2.2E-40 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS16690 6aed9767622333298cdddfb880bcec5b 345 Gene3D G3DSA:3.60.110.10 4 343 1.5E-62 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL504_RS05165 547634302644ce360d07cae140da26c3 259 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 256 1.8E-90 T 28-03-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like AL504_RS05165 547634302644ce360d07cae140da26c3 259 Gene3D G3DSA:3.30.420.10 4 219 4.0E-35 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS05165 547634302644ce360d07cae140da26c3 259 SUPERFAMILY SSF53098 4 228 2.66E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS08520 00fb57845fcc36ec119e3c69d9a1705e 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 318 1.9E-95 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS08520 00fb57845fcc36ec119e3c69d9a1705e 338 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 290 2.0E-83 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS08520 00fb57845fcc36ec119e3c69d9a1705e 338 PIRSF PIRSF006470 4 335 5.0E-119 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS01310 f8d5326b8f93ee0aec44a1f22192878b 339 SUPERFAMILY SSF51735 1 330 4.74E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01310 f8d5326b8f93ee0aec44a1f22192878b 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 241 2.8E-19 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS01310 f8d5326b8f93ee0aec44a1f22192878b 339 Gene3D G3DSA:3.40.50.720 1 334 1.5E-47 T 28-03-2018 AL504_RS23800 1d2a39121a17413e1186e896a3b94a27 293 SUPERFAMILY SSF54506 29 289 5.41E-47 T 28-03-2018 AL504_RS23800 1d2a39121a17413e1186e896a3b94a27 293 Gene3D G3DSA:3.10.310.10 143 288 2.2E-32 T 28-03-2018 AL504_RS23800 1d2a39121a17413e1186e896a3b94a27 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 28 279 6.4E-36 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS23800 1d2a39121a17413e1186e896a3b94a27 293 Pfam PF02567 Phenazine biosynthesis-like protein 28 276 1.4E-37 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS23800 1d2a39121a17413e1186e896a3b94a27 293 PIRSF PIRSF016184 17 291 6.9E-52 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL504_RS23800 1d2a39121a17413e1186e896a3b94a27 293 Gene3D G3DSA:3.10.310.10 15 142 6.4E-25 T 28-03-2018 AL504_RS25510 9c15be78a45aabb4dea5b5bf92a8e2be 297 SUPERFAMILY SSF103481 43 142 6.93E-8 T 28-03-2018 AL504_RS25510 9c15be78a45aabb4dea5b5bf92a8e2be 297 SUPERFAMILY SSF103481 198 295 3.66E-6 T 28-03-2018 AL504_RS03880 78dfee14a257e181a689a174c5d5d1f0 283 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 71 276 5.9E-67 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS03880 78dfee14a257e181a689a174c5d5d1f0 283 Pfam PF10370 Domain of unknown function (DUF2437) 1 65 4.1E-5 T 28-03-2018 IPR018833 Domain of unknown function DUF2437 AL504_RS03880 78dfee14a257e181a689a174c5d5d1f0 283 SUPERFAMILY SSF56529 60 277 1.83E-78 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS03880 78dfee14a257e181a689a174c5d5d1f0 283 Gene3D G3DSA:3.90.850.10 25 282 1.5E-78 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL504_RS30445 d7ddb8db8fcb22dd3deba38e61b41903 104 Gene3D G3DSA:3.30.1390.10 11 103 1.1E-34 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL504_RS30445 d7ddb8db8fcb22dd3deba38e61b41903 104 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 22 99 8.3E-36 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AL504_RS30445 d7ddb8db8fcb22dd3deba38e61b41903 104 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 3 99 29.091 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AL504_RS30445 d7ddb8db8fcb22dd3deba38e61b41903 104 SUPERFAMILY SSF54736 21 103 2.93E-32 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL504_RS11795 7feb3a8107e387341d18c4b11eadcd73 483 Gene3D G3DSA:1.10.4100.10 2 331 1.1E-106 T 28-03-2018 AL504_RS11795 7feb3a8107e387341d18c4b11eadcd73 483 Pfam PF03972 MmgE/PrpD family 18 467 1.2E-165 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 AL504_RS11795 7feb3a8107e387341d18c4b11eadcd73 483 Gene3D G3DSA:1.10.4100.10 399 483 3.1E-14 T 28-03-2018 AL504_RS11795 7feb3a8107e387341d18c4b11eadcd73 483 SUPERFAMILY SSF103378 12 482 1.09E-166 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 AL504_RS11795 7feb3a8107e387341d18c4b11eadcd73 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 7.2E-267 T 28-03-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 PRINTS PR00125 ATP synthase delta subunit signature 137 152 1.5E-22 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 PRINTS PR00125 ATP synthase delta subunit signature 76 87 1.5E-22 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 PRINTS PR00125 ATP synthase delta subunit signature 152 170 1.5E-22 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.5E-22 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 PRINTS PR00125 ATP synthase delta subunit signature 87 101 1.5E-22 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 177 1.8E-40 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 177 2.1E-50 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 179 20.079 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 SUPERFAMILY SSF47928 3 107 9.94E-24 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS16930 0569f9dd9274662d0b433f404e31fb89 179 Gene3D G3DSA:1.10.520.20 2 108 1.6E-27 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL504_RS15665 749bc8d28198f3a3ba8de0c0873a630e 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 276 3.5E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15665 749bc8d28198f3a3ba8de0c0873a630e 278 Gene3D G3DSA:1.10.3720.10 36 278 3.4E-26 T 28-03-2018 AL504_RS15665 749bc8d28198f3a3ba8de0c0873a630e 278 SUPERFAMILY SSF161098 81 261 3.53E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS04685 de2e4e9c61a4299784dcad750c745878 386 Pfam PF02563 Polysaccharide biosynthesis/export protein 86 164 1.6E-11 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL504_RS04685 de2e4e9c61a4299784dcad750c745878 386 Gene3D G3DSA:3.30.1950.10 88 164 1.9E-10 T 28-03-2018 AL504_RS04685 de2e4e9c61a4299784dcad750c745878 386 Gene3D G3DSA:3.10.560.10 165 249 4.0E-10 T 28-03-2018 AL504_RS04685 de2e4e9c61a4299784dcad750c745878 386 Gene3D G3DSA:3.10.560.10 250 345 1.9E-9 T 28-03-2018 AL504_RS20845 ce098e80753196587cd182a9760ee7f1 412 Gene3D G3DSA:3.50.50.60 132 266 1.1E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS20845 ce098e80753196587cd182a9760ee7f1 412 SUPERFAMILY SSF51905 10 154 3.75E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS20845 ce098e80753196587cd182a9760ee7f1 412 SUPERFAMILY SSF51905 123 266 1.65E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS20845 ce098e80753196587cd182a9760ee7f1 412 Gene3D G3DSA:3.50.50.60 1 131 1.2E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19210 dd63744e90b0a5c573a09004aaeae7a8 390 SUPERFAMILY SSF54373 231 306 5.1E-7 T 28-03-2018 AL504_RS19210 dd63744e90b0a5c573a09004aaeae7a8 390 Gene3D G3DSA:3.30.9.10 65 307 2.2E-34 T 28-03-2018 AL504_RS19210 dd63744e90b0a5c573a09004aaeae7a8 390 Pfam PF01266 FAD dependent oxidoreductase 9 350 1.1E-56 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS19210 dd63744e90b0a5c573a09004aaeae7a8 390 Gene3D G3DSA:3.50.50.60 2 64 2.4E-4 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19210 dd63744e90b0a5c573a09004aaeae7a8 390 SUPERFAMILY SSF51905 7 220 1.29E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS19210 dd63744e90b0a5c573a09004aaeae7a8 390 SUPERFAMILY SSF51905 311 369 1.29E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS11980 9bb1de85bc6d53959ea2bd8d9d03d171 336 Gene3D G3DSA:3.90.1150.10 246 336 4.6E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS11980 9bb1de85bc6d53959ea2bd8d9d03d171 336 Gene3D G3DSA:3.40.640.10 1 245 5.7E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS11980 9bb1de85bc6d53959ea2bd8d9d03d171 336 Pfam PF01212 Beta-eliminating lyase 3 283 1.5E-89 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL504_RS11980 9bb1de85bc6d53959ea2bd8d9d03d171 336 PIRSF PIRSF017617 1 336 3.4E-133 T 28-03-2018 IPR023603 Threonine aldolase AL504_RS11980 9bb1de85bc6d53959ea2bd8d9d03d171 336 SUPERFAMILY SSF53383 1 335 5.9E-113 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 Pfam PF01494 FAD binding domain 2 331 4.0E-21 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 Gene3D G3DSA:3.50.50.60 1 381 8.8E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 4.4E-17 T 28-03-2018 AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 4.4E-17 T 28-03-2018 AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.4E-17 T 28-03-2018 AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 4.4E-17 T 28-03-2018 AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 SUPERFAMILY SSF51905 1 169 1.3E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS02655 761f0efd1297b25f7710a354ae1634c9 384 SUPERFAMILY SSF51905 265 372 1.3E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS09720 00ae849d88c7de32237b6059fed7d25c 139 Gene3D G3DSA:3.30.50.20 58 127 2.5E-18 T 28-03-2018 AL504_RS28735 7825766a9591f51f9291ab2025d5ff44 302 Gene3D G3DSA:1.10.10.10 4 88 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28735 7825766a9591f51f9291ab2025d5ff44 302 SUPERFAMILY SSF53850 94 300 6.05E-37 T 28-03-2018 AL504_RS28735 7825766a9591f51f9291ab2025d5ff44 302 Gene3D G3DSA:3.40.190.10 96 182 9.4E-12 T 28-03-2018 AL504_RS28735 7825766a9591f51f9291ab2025d5ff44 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.8E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS28735 7825766a9591f51f9291ab2025d5ff44 302 Gene3D G3DSA:3.40.190.10 183 268 5.3E-18 T 28-03-2018 AL504_RS28735 7825766a9591f51f9291ab2025d5ff44 302 Pfam PF03466 LysR substrate binding domain 92 296 5.8E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS28735 7825766a9591f51f9291ab2025d5ff44 302 SUPERFAMILY SSF46785 7 91 1.94E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04450 4a5b03625aab14d419f4ffd605c56328 293 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 223 2.5E-50 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL504_RS04450 4a5b03625aab14d419f4ffd605c56328 293 Gene3D G3DSA:3.20.20.60 3 235 2.3E-59 T 28-03-2018 AL504_RS04450 4a5b03625aab14d419f4ffd605c56328 293 SUPERFAMILY SSF51621 5 233 7.42E-68 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS04450 4a5b03625aab14d419f4ffd605c56328 293 PIRSF PIRSF015582 3 292 1.4E-78 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like AL504_RS29665 5c56ce95a33500d83f4f169a25c8dde1 1092 Gene3D G3DSA:3.40.50.300 518 910 4.7E-22 T 28-03-2018 AL504_RS29665 5c56ce95a33500d83f4f169a25c8dde1 1092 SUPERFAMILY SSF52540 559 932 4.48E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29665 5c56ce95a33500d83f4f169a25c8dde1 1092 Pfam PF01935 Domain of unknown function DUF87 561 778 4.9E-11 T 28-03-2018 IPR002789 Helicase HerA, central domain AL504_RS20485 b6cec58434b9dbd876ae61458c0593a5 199 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 55 184 2.6E-10 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AL504_RS20485 b6cec58434b9dbd876ae61458c0593a5 199 Gene3D G3DSA:3.40.50.10610 13 198 6.0E-30 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AL504_RS20485 b6cec58434b9dbd876ae61458c0593a5 199 SUPERFAMILY SSF159594 29 191 8.63E-24 T 28-03-2018 AL504_RS03140 ce9443b501d8943688111630426acdb9 124 SUPERFAMILY SSF50249 5 85 1.08E-6 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS23525 02f1dd39c51b15523ab33f6ce230fada 343 Pfam PF16220 Domain of unknown function (DUF4880) 33 74 1.2E-10 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS23525 02f1dd39c51b15523ab33f6ce230fada 343 PIRSF PIRSF018266 23 343 2.9E-79 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS23525 02f1dd39c51b15523ab33f6ce230fada 343 Pfam PF04773 FecR protein 136 229 8.6E-18 T 28-03-2018 IPR006860 FecR protein AL504_RS01265 8d7e8e6a52ccc4d5c29057a4c29e9510 145 Pfam PF02082 Transcriptional regulator 1 81 1.3E-17 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL504_RS01265 8d7e8e6a52ccc4d5c29057a4c29e9510 145 Gene3D G3DSA:1.10.10.10 1 145 1.1E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01265 8d7e8e6a52ccc4d5c29057a4c29e9510 145 SUPERFAMILY SSF46785 4 134 3.52E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06450 f07f45a147fd0938f1b7af6a134e6c86 139 Pfam PF00460 Flagella basal body rod protein 7 37 1.2E-9 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL504_RS06450 f07f45a147fd0938f1b7af6a134e6c86 139 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 1.8E-13 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL504_RS06450 f07f45a147fd0938f1b7af6a134e6c86 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL504_RS06450 f07f45a147fd0938f1b7af6a134e6c86 139 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 2.6E-53 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AL504_RS24215 49468038bdca75535a96851e89a2a1c2 334 SUPERFAMILY SSF56281 9 327 2.67E-58 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS24215 49468038bdca75535a96851e89a2a1c2 334 Gene3D G3DSA:3.60.15.10 20 332 2.2E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL504_RS24215 49468038bdca75535a96851e89a2a1c2 334 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 5 333 1.3E-140 T 28-03-2018 IPR026360 Putative exonuclease, DNA ligase-associated AL504_RS28645 43e162c5146e529e21bc424278f8c43b 295 Gene3D G3DSA:1.25.40.10 159 250 1.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS28645 43e162c5146e529e21bc424278f8c43b 295 SUPERFAMILY SSF48452 79 229 5.82E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS28645 43e162c5146e529e21bc424278f8c43b 295 Gene3D G3DSA:1.25.40.10 51 158 3.5E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS28645 43e162c5146e529e21bc424278f8c43b 295 SMART SM00028 135 168 0.0053 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS28645 43e162c5146e529e21bc424278f8c43b 295 SMART SM00028 169 202 67.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS28645 43e162c5146e529e21bc424278f8c43b 295 PIRSF PIRSF029658 10 283 6.3E-75 T 28-03-2018 IPR016931 Uncharacterised conserved protein UCP029658, TPR AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 350 368 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 148 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 44 69 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 446 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 374 392 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 256 275 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 227 243 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 420 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 111 129 8.3E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 SUPERFAMILY SSF56235 10 531 8.88E-176 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 24 523 1.4E-112 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS27460 e977f1e9ccc0f1e603fe3e9b4578a388 531 Pfam PF01019 Gamma-glutamyltranspeptidase 37 526 3.8E-159 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 Pfam PF00318 Ribosomal protein S2 7 222 2.9E-90 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 PRINTS PR00395 Ribosomal protein S2 signature 156 173 4.9E-35 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 PRINTS PR00395 Ribosomal protein S2 signature 35 44 4.9E-35 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 PRINTS PR00395 Ribosomal protein S2 signature 173 184 4.9E-35 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 PRINTS PR00395 Ribosomal protein S2 signature 85 102 4.9E-35 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 PRINTS PR00395 Ribosomal protein S2 signature 194 208 4.9E-35 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 PRINTS PR00395 Ribosomal protein S2 signature 4 22 4.9E-35 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 SUPERFAMILY SSF52313 4 228 2.09E-90 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 224 4.0E-97 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 Gene3D G3DSA:3.40.50.10490 3 248 1.2E-89 T 28-03-2018 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 223 38.54 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS06200 3ee48fb174f0e6b6cb646aa586e5ceee 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL504_RS09890 28b4d631c96ca395aaea62894958557a 241 Gene3D G3DSA:3.20.20.370 13 233 5.6E-44 T 28-03-2018 AL504_RS09890 28b4d631c96ca395aaea62894958557a 241 Pfam PF01522 Polysaccharide deacetylase 57 194 2.6E-33 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL504_RS09890 28b4d631c96ca395aaea62894958557a 241 SUPERFAMILY SSF88713 21 215 1.24E-43 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS20340 9eaee763dae0448d32643973e42890a6 292 Pfam PF01061 ABC-2 type transporter 49 252 3.1E-13 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL504_RS06925 2623ced4085d413435246f0508ca284c 170 Gene3D G3DSA:1.10.1740.10 5 84 8.1E-16 T 28-03-2018 AL504_RS06925 2623ced4085d413435246f0508ca284c 170 SUPERFAMILY SSF88659 89 162 1.35E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06925 2623ced4085d413435246f0508ca284c 170 Pfam PF04542 Sigma-70 region 2 15 79 7.4E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06925 2623ced4085d413435246f0508ca284c 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 160 4.2E-23 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06925 2623ced4085d413435246f0508ca284c 170 Gene3D G3DSA:1.10.10.10 104 166 1.9E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06925 2623ced4085d413435246f0508ca284c 170 SUPERFAMILY SSF88946 12 100 6.28E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS06925 2623ced4085d413435246f0508ca284c 170 Pfam PF08281 Sigma-70, region 4 111 160 1.7E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS26450 f5fdf08d342abf181fe1633a18a324cd 210 Gene3D G3DSA:3.40.50.150 1 210 3.8E-48 T 28-03-2018 AL504_RS26450 f5fdf08d342abf181fe1633a18a324cd 210 Pfam PF01728 FtsJ-like methyltransferase 28 208 6.6E-52 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL504_RS26450 f5fdf08d342abf181fe1633a18a324cd 210 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 210 30.049 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AL504_RS26450 f5fdf08d342abf181fe1633a18a324cd 210 SUPERFAMILY SSF53335 27 209 3.71E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS26450 f5fdf08d342abf181fe1633a18a324cd 210 PIRSF PIRSF005461 1 210 6.8E-68 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AL504_RS28470 0a0157421fb0629e18de6e0915e3ce72 469 Pfam PF02397 Bacterial sugar transferase 279 460 1.4E-63 T 28-03-2018 IPR003362 Bacterial sugar transferase AL504_RS28470 0a0157421fb0629e18de6e0915e3ce72 469 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 469 2.1E-139 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL504_RS28470 0a0157421fb0629e18de6e0915e3ce72 469 Pfam PF13727 CoA-binding domain 68 243 3.4E-36 T 28-03-2018 AL504_RS28470 0a0157421fb0629e18de6e0915e3ce72 469 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 469 5.7E-155 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AL504_RS28470 0a0157421fb0629e18de6e0915e3ce72 469 Gene3D G3DSA:3.40.50.720 146 268 3.6E-13 T 28-03-2018 AL504_RS28470 0a0157421fb0629e18de6e0915e3ce72 469 SUPERFAMILY SSF51735 148 233 6.43E-6 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS23355 f025ceff5aa8fad49b769e96607ae4e6 83 Pfam PF00037 4Fe-4S binding domain 6 25 5.1E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS23355 f025ceff5aa8fad49b769e96607ae4e6 83 Gene3D G3DSA:3.30.70.20 2 83 5.7E-17 T 28-03-2018 AL504_RS23355 f025ceff5aa8fad49b769e96607ae4e6 83 SUPERFAMILY SSF54862 5 77 7.89E-20 T 28-03-2018 AL504_RS23355 f025ceff5aa8fad49b769e96607ae4e6 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 SUPERFAMILY SSF54534 233 333 1.11E-24 T 28-03-2018 AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 Pfam PF09312 SurA N-terminal domain 56 173 6.7E-35 T 28-03-2018 IPR015391 SurA N-terminal AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 SUPERFAMILY SSF54534 371 470 9.16E-34 T 28-03-2018 AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 Gene3D G3DSA:1.10.4030.10 52 179 5.9E-23 T 28-03-2018 AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 SUPERFAMILY SSF109998 56 196 2.09E-38 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 SUPERFAMILY SSF109998 230 261 2.09E-38 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 Pfam PF13616 PPIC-type PPIASE domain 371 469 6.6E-27 T 28-03-2018 AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 Pfam PF00639 PPIC-type PPIASE domain 238 331 1.8E-16 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 Hamap MF_01183 Chaperone SurA [surA]. 14 514 32.88 T 28-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 Gene3D G3DSA:3.10.50.40 223 348 2.5E-21 T 28-03-2018 AL504_RS14410 44d378f922fbcdd512eb2f7db79b7141 524 Gene3D G3DSA:3.10.50.40 367 508 1.2E-34 T 28-03-2018 AL504_RS18225 bedb3facde4f9d1d8b97fdfee3b61965 181 Pfam PF11000 Protein of unknown function (DUF2840) 32 178 9.7E-62 T 28-03-2018 IPR021263 Protein of unknown function DUF2840 AL504_RS05975 aee535ab9149da75366a44f790a4e6f6 382 Gene3D G3DSA:2.40.50.100 118 158 0.099 T 28-03-2018 AL504_RS05975 aee535ab9149da75366a44f790a4e6f6 382 SUPERFAMILY SSF111369 44 287 2.35E-74 T 28-03-2018 AL504_RS05975 aee535ab9149da75366a44f790a4e6f6 382 Gene3D G3DSA:2.40.50.100 159 198 2.1E-6 T 28-03-2018 AL504_RS05975 aee535ab9149da75366a44f790a4e6f6 382 Gene3D G3DSA:2.40.50.100 54 117 2.1E-18 T 28-03-2018 AL504_RS05975 aee535ab9149da75366a44f790a4e6f6 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 363 1.1E-79 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS05975 aee535ab9149da75366a44f790a4e6f6 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 281 3.0E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS03145 da5a692dc422c3383cfe7f3812543de0 274 Pfam PF08534 Redoxin 142 256 2.8E-14 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL504_RS03145 da5a692dc422c3383cfe7f3812543de0 274 SUPERFAMILY SSF52833 141 267 2.14E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS03145 da5a692dc422c3383cfe7f3812543de0 274 ProSitePatterns PS00194 Thioredoxin family active site. 162 180 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL504_RS03145 da5a692dc422c3383cfe7f3812543de0 274 Gene3D G3DSA:3.40.30.10 129 272 1.8E-24 T 28-03-2018 AL504_RS01330 4ede1e4e2c68c5d2f37ee81597fea9a3 245 Gene3D G3DSA:3.40.50.80 127 244 6.8E-9 T 28-03-2018 AL504_RS01330 4ede1e4e2c68c5d2f37ee81597fea9a3 245 SUPERFAMILY SSF63380 20 118 9.46E-13 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL504_RS01330 4ede1e4e2c68c5d2f37ee81597fea9a3 245 Pfam PF08021 Siderophore-interacting FAD-binding domain 16 119 2.8E-10 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AL504_RS01330 4ede1e4e2c68c5d2f37ee81597fea9a3 245 Gene3D G3DSA:2.40.30.10 18 119 2.8E-16 T 28-03-2018 AL504_RS10490 82575fb9be2337aee8137a712c014cca 329 SUPERFAMILY SSF53850 118 286 1.47E-8 T 28-03-2018 AL504_RS10490 82575fb9be2337aee8137a712c014cca 329 Gene3D G3DSA:3.40.190.10 40 302 2.9E-6 T 28-03-2018 AL504_RS10490 82575fb9be2337aee8137a712c014cca 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 325 3.4E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10490 82575fb9be2337aee8137a712c014cca 329 PIRSF PIRSF017082 1 328 1.4E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10020 a14c50ae8bbb20bb58aca6b7f1bd0383 141 Gene3D G3DSA:1.10.490.10 5 141 2.6E-34 T 28-03-2018 AL504_RS10020 a14c50ae8bbb20bb58aca6b7f1bd0383 141 SUPERFAMILY SSF46458 18 139 3.42E-36 T 28-03-2018 IPR009050 Globin-like AL504_RS10020 a14c50ae8bbb20bb58aca6b7f1bd0383 141 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 67 91 - T 28-03-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 AL504_RS10020 a14c50ae8bbb20bb58aca6b7f1bd0383 141 Pfam PF01152 Bacterial-like globin 18 137 1.5E-40 T 28-03-2018 IPR001486 Truncated hemoglobin GO:0019825 AL504_RS30400 58e22c041f3e87bdb0fe53d5845229c4 207 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 186 2.4E-28 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL504_RS05195 2e273e5c05f10d16f111ecda9deaf994 430 PIRSF PIRSF005353 1 429 2.0E-176 T 28-03-2018 IPR026033 Purine permease PbuG-like AL504_RS05195 2e273e5c05f10d16f111ecda9deaf994 430 Pfam PF00860 Permease family 17 390 1.6E-52 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 Gene3D G3DSA:2.40.170.20 258 858 6.8E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 Pfam PF07715 TonB-dependent Receptor Plug Domain 148 242 7.0E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 SUPERFAMILY SSF56935 516 858 4.45E-97 T 28-03-2018 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 SUPERFAMILY SSF56935 140 487 4.45E-97 T 28-03-2018 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 134 859 3.4E-164 T 28-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 171 859 9.1E-171 T 28-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 Pfam PF00593 TonB dependent receptor 361 858 5.2E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 Gene3D G3DSA:2.170.130.10 138 257 2.4E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS25170 a25b6256a12005249d4401a723e1190e 859 SMART SM00965 68 119 3.8E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS16995 5096dc26f78ea55f85c08724e4a4bf75 253 Hamap MF_00943 Maleate isomerase [maiA]. 8 253 50.753 T 28-03-2018 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 AL504_RS16995 5096dc26f78ea55f85c08724e4a4bf75 253 PIRSF PIRSF015736 1 253 1.8E-60 T 28-03-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase AL504_RS16995 5096dc26f78ea55f85c08724e4a4bf75 253 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 229 3.7E-8 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL504_RS16995 5096dc26f78ea55f85c08724e4a4bf75 253 Gene3D G3DSA:3.40.50.1860 22 238 1.4E-4 T 28-03-2018 AL504_RS09015 dd5a193618d4ec168f5942787852a95d 263 Gene3D G3DSA:3.90.1530.10 16 126 8.8E-12 T 28-03-2018 AL504_RS09015 dd5a193618d4ec168f5942787852a95d 263 SUPERFAMILY SSF110849 45 124 2.88E-7 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS09015 dd5a193618d4ec168f5942787852a95d 263 Pfam PF02195 ParB-like nuclease domain 46 121 4.7E-5 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL504_RS09015 dd5a193618d4ec168f5942787852a95d 263 SUPERFAMILY SSF109709 118 218 7.19E-18 T 28-03-2018 AL504_RS09015 dd5a193618d4ec168f5942787852a95d 263 Gene3D G3DSA:1.10.8.10 190 260 0.0096 T 28-03-2018 AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 SUPERFAMILY SSF103473 259 472 2.49E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 SUPERFAMILY SSF103473 30 216 2.49E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 Gene3D G3DSA:1.20.1250.20 275 475 0.045 T 28-03-2018 AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 Gene3D G3DSA:1.20.1250.20 25 205 2.4E-26 T 28-03-2018 AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 Pfam PF07690 Major Facilitator Superfamily 34 424 9.4E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 PRINTS PR01035 Tetracycline resistance protein signature 38 54 2.2E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 PRINTS PR01035 Tetracycline resistance protein signature 274 294 2.2E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS24365 093f1283cd657483d391b625fd2a4489 475 PRINTS PR01035 Tetracycline resistance protein signature 152 174 2.2E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS22285 11cfa4ebec9424898335aac7f451ef60 468 Pfam PF13644 DKNYY family 48 232 1.9E-9 T 28-03-2018 IPR027375 DKNYY family AL504_RS21990 b7f33e3701746b3e59446741d274914b 186 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 1 175 6.1E-24 T 28-03-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 AL504_RS21990 b7f33e3701746b3e59446741d274914b 186 SUPERFAMILY SSF56784 2 177 2.71E-39 T 28-03-2018 IPR023214 HAD-like domain AL504_RS21990 b7f33e3701746b3e59446741d274914b 186 Gene3D G3DSA:1.10.40.40 14 57 9.7E-16 T 28-03-2018 AL504_RS21990 b7f33e3701746b3e59446741d274914b 186 Gene3D G3DSA:3.40.50.1000 58 178 3.4E-31 T 28-03-2018 IPR023214 HAD-like domain AL504_RS14295 0f5312f39f98fa99f91c69c973d0280c 325 Gene3D G3DSA:3.40.190.10 124 235 7.7E-10 T 28-03-2018 AL504_RS14295 0f5312f39f98fa99f91c69c973d0280c 325 PIRSF PIRSF017082 1 325 6.6E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14295 0f5312f39f98fa99f91c69c973d0280c 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 2.4E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS14295 0f5312f39f98fa99f91c69c973d0280c 325 SUPERFAMILY SSF53850 112 286 4.34E-10 T 28-03-2018 AL504_RS13805 63babcb99c4870d7901dae819945b5c2 308 Pfam PF00682 HMGL-like 6 275 1.8E-43 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL504_RS13805 63babcb99c4870d7901dae819945b5c2 308 Gene3D G3DSA:3.20.20.70 1 284 1.8E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS13805 63babcb99c4870d7901dae819945b5c2 308 SUPERFAMILY SSF51569 2 295 4.98E-63 T 28-03-2018 AL504_RS24080 9ae72c32ecda1d8714a9644b89f3c72e 407 Gene3D G3DSA:1.20.1250.20 212 401 3.0E-15 T 28-03-2018 AL504_RS24080 9ae72c32ecda1d8714a9644b89f3c72e 407 SUPERFAMILY SSF103473 12 399 2.22E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24080 9ae72c32ecda1d8714a9644b89f3c72e 407 Gene3D G3DSA:1.20.1250.20 7 211 4.8E-14 T 28-03-2018 AL504_RS24080 9ae72c32ecda1d8714a9644b89f3c72e 407 Pfam PF07690 Major Facilitator Superfamily 30 258 3.8E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS13345 1e925351f5966d7f8e8c9ccab3fa3c01 248 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 248 1.0E-69 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 AL504_RS13345 1e925351f5966d7f8e8c9ccab3fa3c01 248 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 23 248 3.7E-73 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 AL504_RS06865 506dad1837177399e35ef15ab7ddd7e0 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 400 6.1E-158 T 28-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AL504_RS06865 506dad1837177399e35ef15ab7ddd7e0 401 Pfam PF00482 Type II secretion system (T2SS), protein F 270 392 1.5E-26 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS06865 506dad1837177399e35ef15ab7ddd7e0 401 Pfam PF00482 Type II secretion system (T2SS), protein F 68 190 7.7E-33 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS06865 506dad1837177399e35ef15ab7ddd7e0 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 365 379 4.5E-28 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS06865 506dad1837177399e35ef15ab7ddd7e0 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 4.5E-28 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS06865 506dad1837177399e35ef15ab7ddd7e0 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 4.5E-28 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS06865 506dad1837177399e35ef15ab7ddd7e0 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 381 400 4.5E-28 T 28-03-2018 IPR003004 GspF/PilC family AL504_RS19535 ae604ae032350fcbaad24d290cc8fb74 333 PIRSF PIRSF017082 1 332 2.1E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19535 ae604ae032350fcbaad24d290cc8fb74 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 328 4.3E-77 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19535 ae604ae032350fcbaad24d290cc8fb74 333 SUPERFAMILY SSF53850 122 289 1.72E-12 T 28-03-2018 AL504_RS19535 ae604ae032350fcbaad24d290cc8fb74 333 Gene3D G3DSA:3.40.190.10 132 238 1.0E-12 T 28-03-2018 AL504_RS30685 b6a67a1e970a7aac02a66212c6983643 221 Gene3D G3DSA:3.40.50.170 1 208 4.5E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS30685 b6a67a1e970a7aac02a66212c6983643 221 SUPERFAMILY SSF53328 10 208 9.55E-65 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS30685 b6a67a1e970a7aac02a66212c6983643 221 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 10 195 31.613 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL504_RS30685 b6a67a1e970a7aac02a66212c6983643 221 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 10 198 9.9E-75 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL504_RS30685 b6a67a1e970a7aac02a66212c6983643 221 Pfam PF00551 Formyl transferase 10 189 2.4E-59 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL504_RS27825 40279e022af339b4ca59546353545d13 338 SUPERFAMILY SSF51735 13 323 1.45E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS27825 40279e022af339b4ca59546353545d13 338 Gene3D G3DSA:3.40.50.720 9 325 1.5E-26 T 28-03-2018 AL504_RS27825 40279e022af339b4ca59546353545d13 338 Pfam PF13460 NAD(P)H-binding 18 115 6.1E-10 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS17360 69cd970f35d457dbd5cf7f6aafdd694b 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 279 1.1E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS17360 69cd970f35d457dbd5cf7f6aafdd694b 292 Gene3D G3DSA:1.10.3720.10 3 267 4.3E-44 T 28-03-2018 AL504_RS17360 69cd970f35d457dbd5cf7f6aafdd694b 292 SUPERFAMILY SSF161098 73 262 2.09E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS17585 9b27c9f1bbc103cfa7c3522831f1eed4 466 Pfam PF00474 Sodium:solute symporter family 32 413 9.7E-36 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL504_RS17585 9b27c9f1bbc103cfa7c3522831f1eed4 466 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 395 415 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 SUPERFAMILY SSF50129 13 144 4.87E-35 T 28-03-2018 IPR011032 GroES-like AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 8 329 6.4E-139 T 28-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 Gene3D G3DSA:3.90.180.10 8 136 2.1E-34 T 28-03-2018 AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 SMART SM00829 14 327 1.1E-75 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 107 1.5E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 SUPERFAMILY SSF51735 115 291 2.43E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 Gene3D G3DSA:3.40.50.720 137 313 1.5E-44 T 28-03-2018 AL504_RS28755 5df40cf7729589773762a6b6e008fd05 331 Pfam PF00107 Zinc-binding dehydrogenase 155 280 3.1E-31 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS13915 321f77980dbae58193c4db064ea8fa11 163 Gene3D G3DSA:3.10.450.50 2 163 5.9E-26 T 28-03-2018 AL504_RS13915 321f77980dbae58193c4db064ea8fa11 163 SUPERFAMILY SSF54427 7 163 1.49E-40 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS13915 321f77980dbae58193c4db064ea8fa11 163 Pfam PF00866 Ring hydroxylating beta subunit 15 151 1.8E-25 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AL504_RS30390 2447fad166706df138a6bd4f9bf94a2b 349 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 10 346 38.527 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL504_RS30390 2447fad166706df138a6bd4f9bf94a2b 349 SUPERFAMILY SSF52540 55 196 1.27E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30390 2447fad166706df138a6bd4f9bf94a2b 349 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 31 331 2.6E-70 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL504_RS30390 2447fad166706df138a6bd4f9bf94a2b 349 Gene3D G3DSA:3.40.50.300 55 238 5.6E-7 T 28-03-2018 AL504_RS30390 2447fad166706df138a6bd4f9bf94a2b 349 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 22 341 1.7E-101 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL504_RS05890 5b541fea7a9f9fae998898259bae5b7f 236 Pfam PF00005 ABC transporter 22 164 3.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05890 5b541fea7a9f9fae998898259bae5b7f 236 SUPERFAMILY SSF52540 5 221 1.36E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05890 5b541fea7a9f9fae998898259bae5b7f 236 SMART SM00382 31 214 5.9E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS05890 5b541fea7a9f9fae998898259bae5b7f 236 Gene3D G3DSA:3.40.50.300 3 223 5.7E-50 T 28-03-2018 AL504_RS05890 5b541fea7a9f9fae998898259bae5b7f 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23710 1194bdc86997bc58867d846283b5beed 313 Pfam PF01032 FecCD transport family 9 309 1.0E-59 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS23710 1194bdc86997bc58867d846283b5beed 313 Gene3D G3DSA:1.10.3470.10 1 313 7.0E-38 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS23710 1194bdc86997bc58867d846283b5beed 313 SUPERFAMILY SSF81345 4 309 6.67E-60 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS00175 88d6927ec64d2ff3a21803a34394738a 231 Pfam PF00072 Response regulator receiver domain 6 114 1.1E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00175 88d6927ec64d2ff3a21803a34394738a 231 SMART SM00862 150 227 7.1E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS00175 88d6927ec64d2ff3a21803a34394738a 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 8.0E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS00175 88d6927ec64d2ff3a21803a34394738a 231 Gene3D G3DSA:3.40.50.2300 2 123 4.0E-33 T 28-03-2018 AL504_RS00175 88d6927ec64d2ff3a21803a34394738a 231 SMART SM00448 4 114 5.5E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS00175 88d6927ec64d2ff3a21803a34394738a 231 Gene3D G3DSA:1.10.10.10 124 231 7.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00175 88d6927ec64d2ff3a21803a34394738a 231 SUPERFAMILY SSF52172 5 176 3.84E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS02895 dc92cc4a2df635a2e4ada13da8726861 716 Gene3D G3DSA:2.40.170.20 186 716 3.0E-79 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS02895 dc92cc4a2df635a2e4ada13da8726861 716 Gene3D G3DSA:2.170.130.10 23 185 4.3E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS02895 dc92cc4a2df635a2e4ada13da8726861 716 SUPERFAMILY SSF56935 23 716 1.55E-138 T 28-03-2018 AL504_RS02895 dc92cc4a2df635a2e4ada13da8726861 716 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 172 1.8E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS02895 dc92cc4a2df635a2e4ada13da8726861 716 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 714 1.7E-116 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS02895 dc92cc4a2df635a2e4ada13da8726861 716 Pfam PF00593 TonB dependent receptor 246 715 1.6E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS25260 219b939425cd36513a8c96c6a23d2d64 375 Gene3D G3DSA:1.10.3470.10 48 366 9.4E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS25260 219b939425cd36513a8c96c6a23d2d64 375 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 351 3.7E-38 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS25260 219b939425cd36513a8c96c6a23d2d64 375 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 48 362 1.9E-136 T 28-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC AL504_RS30100 f661bfa2c95da7974cdad6bb42716a39 387 Gene3D G3DSA:1.20.1250.20 1 192 9.2E-10 T 28-03-2018 AL504_RS30100 f661bfa2c95da7974cdad6bb42716a39 387 SUPERFAMILY SSF103473 3 385 1.44E-22 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS30100 f661bfa2c95da7974cdad6bb42716a39 387 TIGRFAM TIGR02718 sider_RhtX_FptX: siderophore transporter, RhtX/FptX family 2 377 1.4E-129 T 28-03-2018 IPR014090 Siderophore transporter, RhtX/FptX family AL504_RS30100 f661bfa2c95da7974cdad6bb42716a39 387 Gene3D G3DSA:1.20.1250.20 195 387 2.2E-12 T 28-03-2018 AL504_RS30100 f661bfa2c95da7974cdad6bb42716a39 387 Pfam PF13000 Acetyl-coenzyme A transporter 1 4 143 1.5E-18 T 28-03-2018 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 Reactome: R-HSA-425397 AL504_RS26375 5d0ec22d7d52fac48c52564e6e2d7fe9 317 TIGRFAM TIGR00874 talAB: transaldolase 3 314 1.3E-128 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL504_RS26375 5d0ec22d7d52fac48c52564e6e2d7fe9 317 Hamap MF_00492 Transaldolase [tal]. 2 316 47.73 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL504_RS26375 5d0ec22d7d52fac48c52564e6e2d7fe9 317 SUPERFAMILY SSF51569 1 314 7.85E-104 T 28-03-2018 AL504_RS26375 5d0ec22d7d52fac48c52564e6e2d7fe9 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL504_RS26375 5d0ec22d7d52fac48c52564e6e2d7fe9 317 ProSitePatterns PS00958 Transaldolase active site. 123 140 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL504_RS26375 5d0ec22d7d52fac48c52564e6e2d7fe9 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 310 1.7E-94 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL504_RS26375 5d0ec22d7d52fac48c52564e6e2d7fe9 317 Gene3D G3DSA:3.20.20.70 2 316 3.7E-111 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.037 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 9.0E-39 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 SUPERFAMILY SSF47060 4 89 2.94E-35 T 28-03-2018 IPR009068 S15/NS1, RNA-binding AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 SMART SM01387 8 88 1.2E-52 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 Pfam PF00312 Ribosomal protein S15 8 88 9.0E-38 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-31 T 28-03-2018 AL504_RS13120 6f6e66beb04f24d606458190ee8838c4 89 Gene3D G3DSA:1.10.287.10 2 89 3.2E-35 T 28-03-2018 AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 5.7E-6 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 5.7E-6 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 5.7E-6 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 Pfam PF13411 MerR HTH family regulatory protein 10 72 4.4E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 SMART SM00422 10 78 9.4E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 Gene3D G3DSA:1.10.1660.10 6 62 3.3E-17 T 28-03-2018 AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 SUPERFAMILY SSF46955 10 120 7.33E-24 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS21520 776da727d806f1383dec4c58abaad0ef 128 Gene3D G3DSA:1.10.1660.10 63 128 4.0E-14 T 28-03-2018 AL504_RS24610 35c93e63c2c71b05edefa20372fc640e 393 Pfam PF13609 Gram-negative porin 7 373 2.5E-53 T 28-03-2018 AL504_RS24610 35c93e63c2c71b05edefa20372fc640e 393 SUPERFAMILY SSF56935 21 393 3.66E-69 T 28-03-2018 AL504_RS24610 35c93e63c2c71b05edefa20372fc640e 393 PRINTS PR00184 Neisseria sp. porin signature 70 95 2.4E-5 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS24610 35c93e63c2c71b05edefa20372fc640e 393 PRINTS PR00184 Neisseria sp. porin signature 347 371 2.4E-5 T 28-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 AL504_RS24610 35c93e63c2c71b05edefa20372fc640e 393 Gene3D G3DSA:2.40.160.10 23 393 4.3E-64 T 28-03-2018 AL504_RS12775 f9fdc3b6b58999a390ee919fd36268fc 780 Gene3D G3DSA:2.170.130.10 96 237 2.7E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12775 f9fdc3b6b58999a390ee919fd36268fc 780 SUPERFAMILY SSF56935 99 778 2.38E-122 T 28-03-2018 AL504_RS12775 f9fdc3b6b58999a390ee919fd36268fc 780 Gene3D G3DSA:2.40.170.20 238 779 6.9E-80 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS12775 f9fdc3b6b58999a390ee919fd36268fc 780 Pfam PF07715 TonB-dependent Receptor Plug Domain 136 230 7.0E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS12775 f9fdc3b6b58999a390ee919fd36268fc 780 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 138 778 1.9E-101 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS12775 f9fdc3b6b58999a390ee919fd36268fc 780 SMART SM00965 46 96 5.8E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS12775 f9fdc3b6b58999a390ee919fd36268fc 780 Pfam PF00593 TonB dependent receptor 306 778 1.2E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS29780 ae13d4cc865847e1b45141d1bc1fb4de 416 ProSitePatterns PS00336 Beta-lactamase class-C active site. 114 121 - T 28-03-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 AL504_RS29780 ae13d4cc865847e1b45141d1bc1fb4de 416 Gene3D G3DSA:3.40.710.10 54 416 1.4E-69 T 28-03-2018 AL504_RS29780 ae13d4cc865847e1b45141d1bc1fb4de 416 SUPERFAMILY SSF56601 60 414 1.54E-93 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS29780 ae13d4cc865847e1b45141d1bc1fb4de 416 Pfam PF00144 Beta-lactamase 66 413 1.2E-72 T 28-03-2018 IPR001466 Beta-lactamase-related AL504_RS23535 37b404fd16d19d9977946c59701178b5 161 Pfam PF12802 MarR family 48 106 5.7E-11 T 28-03-2018 AL504_RS23535 37b404fd16d19d9977946c59701178b5 161 Gene3D G3DSA:1.10.10.10 4 157 2.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23535 37b404fd16d19d9977946c59701178b5 161 SMART SM00347 42 142 8.8E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23535 37b404fd16d19d9977946c59701178b5 161 SUPERFAMILY SSF46785 19 153 6.23E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23535 37b404fd16d19d9977946c59701178b5 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 1.4E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23535 37b404fd16d19d9977946c59701178b5 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 1.4E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS23535 37b404fd16d19d9977946c59701178b5 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 1.4E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS21340 df87ba06ef8f1e2a3a65c76fd179bfad 277 SUPERFAMILY SSF55931 73 231 1.08E-33 T 28-03-2018 AL504_RS21340 df87ba06ef8f1e2a3a65c76fd179bfad 277 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 74 153 1.9E-5 T 28-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL504_RS21340 df87ba06ef8f1e2a3a65c76fd179bfad 277 SUPERFAMILY SSF55931 5 79 4.41E-14 T 28-03-2018 AL504_RS07695 9c54cede2303b69b0bd3cf8acf44453b 543 SUPERFAMILY SSF51905 8 340 2.59E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07695 9c54cede2303b69b0bd3cf8acf44453b 543 SUPERFAMILY SSF51905 502 534 2.59E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07695 9c54cede2303b69b0bd3cf8acf44453b 543 Pfam PF01593 Flavin containing amine oxidoreductase 21 347 4.0E-17 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL504_RS07695 9c54cede2303b69b0bd3cf8acf44453b 543 Gene3D G3DSA:3.50.50.60 2 540 9.4E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS06465 6a63c54c8ba01b261ebbdd794a331b4f 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 2 92 1.6E-17 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL504_RS06465 6a63c54c8ba01b261ebbdd794a331b4f 97 SUPERFAMILY SSF101498 24 91 3.4E-12 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL504_RS06465 6a63c54c8ba01b261ebbdd794a331b4f 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 89 2.3E-12 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AL504_RS06465 6a63c54c8ba01b261ebbdd794a331b4f 97 Gene3D G3DSA:1.10.287.1160 62 90 1.4E-9 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL504_RS13370 91b54b450a63cdc59e1634ae012617b6 325 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 161 270 1.2E-12 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL504_RS13370 91b54b450a63cdc59e1634ae012617b6 325 Gene3D G3DSA:3.40.50.2000 154 316 1.5E-21 T 28-03-2018 AL504_RS13370 91b54b450a63cdc59e1634ae012617b6 325 SUPERFAMILY SSF53756 24 310 8.16E-31 T 28-03-2018 AL504_RS13370 91b54b450a63cdc59e1634ae012617b6 325 Gene3D G3DSA:3.40.50.2000 19 124 0.077 T 28-03-2018 AL504_RS05730 37fc313dcd05d0c37a24728c3d74bc02 229 SUPERFAMILY SSF161098 21 223 2.88E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05730 37fc313dcd05d0c37a24728c3d74bc02 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 116 1.3E-23 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS05730 37fc313dcd05d0c37a24728c3d74bc02 229 Gene3D G3DSA:1.10.3720.10 5 228 7.8E-44 T 28-03-2018 AL504_RS05730 37fc313dcd05d0c37a24728c3d74bc02 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 223 7.9E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS16470 7d7e250436fa75984ebdca826545181a 258 Gene3D G3DSA:3.40.50.150 29 255 5.4E-45 T 28-03-2018 AL504_RS16470 7d7e250436fa75984ebdca826545181a 258 SUPERFAMILY SSF53335 23 254 3.59E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS16470 7d7e250436fa75984ebdca826545181a 258 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 254 2.9E-73 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL504_RS16470 7d7e250436fa75984ebdca826545181a 258 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL504_RS16470 7d7e250436fa75984ebdca826545181a 258 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 255 3.6E-82 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL504_RS16470 7d7e250436fa75984ebdca826545181a 258 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 165 179 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL504_RS16470 7d7e250436fa75984ebdca826545181a 258 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 256 35.519 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL504_RS04825 02e01564e325f058a0220b95e26ae7f1 210 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 14 209 46.524 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 AL504_RS04825 02e01564e325f058a0220b95e26ae7f1 210 Pfam PF01725 Ham1 family 16 204 3.2E-53 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AL504_RS04825 02e01564e325f058a0220b95e26ae7f1 210 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 16 207 1.9E-50 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AL504_RS04825 02e01564e325f058a0220b95e26ae7f1 210 Gene3D G3DSA:3.90.950.10 4 210 5.1E-75 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL504_RS04825 02e01564e325f058a0220b95e26ae7f1 210 SUPERFAMILY SSF52972 12 207 8.9E-68 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL504_RS18645 2674b69e88dcee7ea5246a2c15729cd7 232 Gene3D G3DSA:3.40.109.10 1 227 5.1E-48 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL504_RS18645 2674b69e88dcee7ea5246a2c15729cd7 232 SUPERFAMILY SSF55469 17 230 3.53E-44 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL504_RS18645 2674b69e88dcee7ea5246a2c15729cd7 232 Pfam PF00881 Nitroreductase family 20 207 1.9E-29 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL504_RS14520 10a3a8b191d29302242db86d8e16a339 157 Pfam PF03692 Putative zinc- or iron-chelating domain 27 110 3.4E-9 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL504_RS29100 38499a137ae7b4dc41db4b68cf88c648 360 Gene3D G3DSA:3.40.50.360 79 342 1.7E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS29100 38499a137ae7b4dc41db4b68cf88c648 360 Pfam PF03358 NADPH-dependent FMN reductase 102 305 3.4E-30 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL504_RS29100 38499a137ae7b4dc41db4b68cf88c648 360 SUPERFAMILY SSF52218 97 229 1.93E-26 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS29100 38499a137ae7b4dc41db4b68cf88c648 360 SUPERFAMILY SSF52218 256 344 1.93E-26 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS02070 4690c0ad3214a62ebfda9140226423f9 130 Gene3D G3DSA:3.30.1330.40 3 130 1.7E-22 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS02070 4690c0ad3214a62ebfda9140226423f9 130 SUPERFAMILY SSF55298 10 129 1.73E-23 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS02070 4690c0ad3214a62ebfda9140226423f9 130 Pfam PF01042 Endoribonuclease L-PSP 24 128 7.6E-12 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS02295 5f5a0a19e674b6800d69a53862cb6432 272 Gene3D G3DSA:3.90.640.20 177 272 1.1E-18 T 28-03-2018 IPR021729 Domain of unknown function DUF3298 AL504_RS02295 5f5a0a19e674b6800d69a53862cb6432 272 Pfam PF11738 Protein of unknown function (DUF3298) 204 258 2.1E-12 T 28-03-2018 IPR021729 Domain of unknown function DUF3298 AL504_RS02295 5f5a0a19e674b6800d69a53862cb6432 272 Gene3D G3DSA:3.30.565.40 45 176 2.0E-15 T 28-03-2018 AL504_RS29095 b055ea50faefbce40a3238328e1c94be 156 Pfam PF04120 Low affinity iron permease 32 151 2.1E-47 T 28-03-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 AL504_RS12500 62e007fc4c50482e61bda4c07ac31e8b 109 Pfam PF10993 Protein of unknown function (DUF2818) 6 102 1.2E-34 T 28-03-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane AL504_RS12500 62e007fc4c50482e61bda4c07ac31e8b 109 PIRSF PIRSF019883 1 106 7.7E-44 T 28-03-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane AL504_RS04585 6a1a0e70de2f3c27914f8fc70a2d2cd5 412 Gene3D G3DSA:1.10.3470.10 101 395 4.4E-45 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS04585 6a1a0e70de2f3c27914f8fc70a2d2cd5 412 Pfam PF11862 Domain of unknown function (DUF3382) 5 98 3.5E-24 T 28-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AL504_RS04585 6a1a0e70de2f3c27914f8fc70a2d2cd5 412 Pfam PF02653 Branched-chain amino acid transport system / permease component 108 393 1.8E-51 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS03445 ed079160deec39294c9bdd6fcc687dac 325 PIRSF PIRSF017082 1 325 1.9E-74 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03445 ed079160deec39294c9bdd6fcc687dac 325 SUPERFAMILY SSF53850 32 235 1.56E-8 T 28-03-2018 AL504_RS03445 ed079160deec39294c9bdd6fcc687dac 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 320 2.2E-68 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03445 ed079160deec39294c9bdd6fcc687dac 325 Gene3D G3DSA:3.40.190.10 127 266 1.7E-9 T 28-03-2018 AL504_RS08205 e64e3008f413f2941be88e671c2b6c74 329 PIRSF PIRSF017082 1 329 8.7E-86 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS08205 e64e3008f413f2941be88e671c2b6c74 329 Gene3D G3DSA:3.40.190.10 85 238 1.3E-10 T 28-03-2018 AL504_RS08205 e64e3008f413f2941be88e671c2b6c74 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 325 3.3E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS08205 e64e3008f413f2941be88e671c2b6c74 329 SUPERFAMILY SSF53850 116 291 8.96E-13 T 28-03-2018 AL504_RS22850 d80c2372a3322b85464fa6fe9d2b9db6 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 5.8E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS22850 d80c2372a3322b85464fa6fe9d2b9db6 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.8E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS22850 d80c2372a3322b85464fa6fe9d2b9db6 200 Gene3D G3DSA:1.10.10.60 1 49 2.4E-19 T 28-03-2018 AL504_RS22850 d80c2372a3322b85464fa6fe9d2b9db6 200 SUPERFAMILY SSF46689 3 84 1.8E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS22850 d80c2372a3322b85464fa6fe9d2b9db6 200 SUPERFAMILY SSF48498 91 196 7.56E-7 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS22850 d80c2372a3322b85464fa6fe9d2b9db6 200 Gene3D G3DSA:1.10.10.60 50 136 1.1E-14 T 28-03-2018 AL504_RS22850 d80c2372a3322b85464fa6fe9d2b9db6 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.4E-17 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS05385 b5e3d528a7e39f73de2a37bbd5dda1e8 447 Gene3D G3DSA:2.30.320.10 60 436 1.3E-8 T 28-03-2018 AL504_RS13130 c2be69a7d210b55d974426ea5b1cc2d1 257 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL504_RS13130 c2be69a7d210b55d974426ea5b1cc2d1 257 Pfam PF01066 CDP-alcohol phosphatidyltransferase 19 82 1.0E-13 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL504_RS13130 c2be69a7d210b55d974426ea5b1cc2d1 257 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 26 165 2.1E-33 T 28-03-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AL504_RS23680 f61fb2847b248097e845a6870a900cfe 408 SUPERFAMILY SSF141868 166 389 1.7E-51 T 28-03-2018 IPR001633 EAL domain AL504_RS23680 f61fb2847b248097e845a6870a900cfe 408 SMART SM01034 2 94 1.1E-30 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AL504_RS23680 f61fb2847b248097e845a6870a900cfe 408 Pfam PF00563 EAL domain 167 388 2.0E-46 T 28-03-2018 IPR001633 EAL domain AL504_RS23680 f61fb2847b248097e845a6870a900cfe 408 Gene3D G3DSA:3.20.20.450 159 394 8.5E-54 T 28-03-2018 IPR001633 EAL domain AL504_RS23680 f61fb2847b248097e845a6870a900cfe 408 Pfam PF04940 Sensors of blue-light using FAD 2 92 2.0E-22 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AL504_RS23680 f61fb2847b248097e845a6870a900cfe 408 SMART SM00052 146 393 6.6E-34 T 28-03-2018 IPR001633 EAL domain AL504_RS23680 f61fb2847b248097e845a6870a900cfe 408 SUPERFAMILY SSF54975 1 113 7.19E-30 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL504_RS03920 4a084fcbf6a364dab9188096ab759399 291 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 3.3E-9 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS03920 4a084fcbf6a364dab9188096ab759399 291 SUPERFAMILY SSF161098 84 269 1.23E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03920 4a084fcbf6a364dab9188096ab759399 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 288 8.7E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS03920 4a084fcbf6a364dab9188096ab759399 291 Gene3D G3DSA:1.10.3720.10 14 277 9.7E-38 T 28-03-2018 AL504_RS00655 2a169bd5a732ff65aa733a5761309688 222 SUPERFAMILY SSF53335 46 191 1.0E-30 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS00655 2a169bd5a732ff65aa733a5761309688 222 Pfam PF13578 Methyltransferase domain 85 188 3.9E-16 T 28-03-2018 AL504_RS00655 2a169bd5a732ff65aa733a5761309688 222 Gene3D G3DSA:3.40.50.150 50 200 9.1E-27 T 28-03-2018 AL504_RS15210 7538096f36124ae20d8c1574372ba236 153 Pfam PF00075 RNase H 9 147 4.8E-51 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AL504_RS15210 7538096f36124ae20d8c1574372ba236 153 Hamap MF_00042 Ribonuclease H [rnhA]. 8 153 33.743 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 AL504_RS15210 7538096f36124ae20d8c1574372ba236 153 SUPERFAMILY SSF53098 10 148 4.93E-58 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS15210 7538096f36124ae20d8c1574372ba236 153 Gene3D G3DSA:3.30.420.10 4 151 1.7E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL504_RS22590 b33b6af1fea9cb8c0b7396770fe59c29 180 SUPERFAMILY SSF160631 12 175 1.12E-6 T 28-03-2018 AL504_RS22590 b33b6af1fea9cb8c0b7396770fe59c29 180 Gene3D G3DSA:3.40.1580.10 4 180 2.1E-12 T 28-03-2018 AL504_RS22590 b33b6af1fea9cb8c0b7396770fe59c29 180 SUPERFAMILY SSF160631 10 52 5.49E-7 T 28-03-2018 AL504_RS22590 b33b6af1fea9cb8c0b7396770fe59c29 180 SMART SM00860 19 175 0.0017 T 28-03-2018 IPR018958 Knr4/Smi1-like domain AL504_RS00830 0cf6b64c9afc1100e5cb4551dd81349d 320 Pfam PF03466 LysR substrate binding domain 101 304 3.0E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS00830 0cf6b64c9afc1100e5cb4551dd81349d 320 Gene3D G3DSA:1.10.10.10 11 97 2.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00830 0cf6b64c9afc1100e5cb4551dd81349d 320 SUPERFAMILY SSF53850 102 310 1.35E-31 T 28-03-2018 AL504_RS00830 0cf6b64c9afc1100e5cb4551dd81349d 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 2.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS00830 0cf6b64c9afc1100e5cb4551dd81349d 320 Gene3D G3DSA:3.40.190.10 194 281 2.5E-15 T 28-03-2018 AL504_RS00830 0cf6b64c9afc1100e5cb4551dd81349d 320 SUPERFAMILY SSF46785 13 124 1.11E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00830 0cf6b64c9afc1100e5cb4551dd81349d 320 Gene3D G3DSA:3.40.190.10 102 193 1.0E-15 T 28-03-2018 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 Pfam PF13404 AsnC-type helix-turn-helix domain 16 56 3.3E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 Gene3D G3DSA:1.10.10.10 179 236 4.3E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 Pfam PF09339 IclR helix-turn-helix domain 188 227 1.3E-5 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 SUPERFAMILY SSF54909 77 152 2.28E-8 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 SUPERFAMILY SSF54909 240 319 8.71E-9 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 16 32 5.7E-6 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 43 5.7E-6 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 43 62 5.7E-6 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 Gene3D G3DSA:1.10.10.10 13 65 7.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 SMART SM00344 16 121 1.5E-11 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 SMART SM00344 181 286 2.5E-4 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 Gene3D G3DSA:3.30.70.920 68 162 4.7E-11 T 28-03-2018 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 Gene3D G3DSA:3.30.70.920 237 325 1.1E-11 T 28-03-2018 AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 SUPERFAMILY SSF46785 15 66 3.04E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20630 6886845b1b4b619b22c6fddf1487838c 335 SUPERFAMILY SSF46785 179 231 3.21E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 Pfam PF07660 Secretin and TonB N terminus short domain 91 140 5.9E-9 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 SMART SM00965 90 141 1.8E-14 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 Gene3D G3DSA:2.40.170.20 297 814 1.5E-81 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 SUPERFAMILY SSF56935 142 814 2.85E-134 T 28-03-2018 AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 Pfam PF07715 TonB-dependent Receptor Plug Domain 183 283 2.0E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 Gene3D G3DSA:2.170.130.10 142 290 5.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 Pfam PF00593 TonB dependent receptor 391 813 5.9E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL504_RS27495 b768e3f4f5bced9a78dbdaa9ae374bcf 814 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 183 813 8.2E-111 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL504_RS14920 5205d999dcaa3df882ad855ba1437788 501 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 7.5E-155 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL504_RS27475 26f9d676268c70671c8ec028aa345a31 293 Pfam PF00892 EamA-like transporter family 147 276 5.8E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS27475 26f9d676268c70671c8ec028aa345a31 293 Pfam PF00892 EamA-like transporter family 8 135 1.4E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS27475 26f9d676268c70671c8ec028aa345a31 293 SUPERFAMILY SSF103481 41 139 1.96E-10 T 28-03-2018 AL504_RS27475 26f9d676268c70671c8ec028aa345a31 293 SUPERFAMILY SSF103481 182 277 1.12E-9 T 28-03-2018 AL504_RS20375 c1007946ee3d14bf6043b64e27ea8d37 214 Gene3D G3DSA:2.160.10.10 91 214 6.8E-32 T 28-03-2018 AL504_RS20375 c1007946ee3d14bf6043b64e27ea8d37 214 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 209 3.9E-70 T 28-03-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like AL504_RS20375 c1007946ee3d14bf6043b64e27ea8d37 214 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 161 193 1.6E-10 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS20375 c1007946ee3d14bf6043b64e27ea8d37 214 SUPERFAMILY SSF51161 5 211 5.96E-46 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS20375 c1007946ee3d14bf6043b64e27ea8d37 214 Gene3D G3DSA:3.40.50.20 3 90 3.6E-18 T 28-03-2018 AL504_RS08100 bc4e70576f7fb3e8bf8a48aae4eca3ef 677 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 52 671 1.2E-262 T 28-03-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 AL504_RS08100 bc4e70576f7fb3e8bf8a48aae4eca3ef 677 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 321 651 8.7E-149 T 28-03-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AL504_RS08100 bc4e70576f7fb3e8bf8a48aae4eca3ef 677 SUPERFAMILY SSF88713 227 280 2.35E-32 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS08100 bc4e70576f7fb3e8bf8a48aae4eca3ef 677 SUPERFAMILY SSF88713 69 199 2.35E-32 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS08100 bc4e70576f7fb3e8bf8a48aae4eca3ef 677 Pfam PF01522 Polysaccharide deacetylase 105 273 5.2E-25 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL504_RS08100 bc4e70576f7fb3e8bf8a48aae4eca3ef 677 Gene3D G3DSA:3.20.20.370 72 494 1.9E-44 T 28-03-2018 AL504_RS26170 b798622b224768323418ee2c05da7e29 550 Gene3D G3DSA:4.10.1070.10 309 411 1.8E-7 T 28-03-2018 AL504_RS26170 b798622b224768323418ee2c05da7e29 550 SUPERFAMILY SSF88874 303 420 2.62E-15 T 28-03-2018 AL504_RS26170 b798622b224768323418ee2c05da7e29 550 SUPERFAMILY SSF88874 235 276 2.62E-15 T 28-03-2018 AL504_RS26170 b798622b224768323418ee2c05da7e29 550 Gene3D G3DSA:3.90.1340.10 231 308 1.1E-14 T 28-03-2018 IPR011083 Phage tail collar domain AL504_RS23325 cb19e98d57c7d53a73d2e473461abb92 165 Pfam PF11158 Protein of unknown function (DUF2938) 10 158 3.8E-67 T 28-03-2018 IPR021329 Protein of unknown function DUF2938 AL504_RS17530 5fd33a505669103cc0e6e8eba817bf95 400 Gene3D G3DSA:3.40.50.2000 1 179 4.3E-24 T 28-03-2018 AL504_RS17530 5fd33a505669103cc0e6e8eba817bf95 400 Pfam PF13439 Glycosyltransferase Family 4 14 169 7.3E-25 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS17530 5fd33a505669103cc0e6e8eba817bf95 400 SUPERFAMILY SSF53756 2 368 1.52E-61 T 28-03-2018 AL504_RS17530 5fd33a505669103cc0e6e8eba817bf95 400 Gene3D G3DSA:3.40.50.2000 180 354 1.6E-29 T 28-03-2018 AL504_RS17530 5fd33a505669103cc0e6e8eba817bf95 400 Pfam PF13692 Glycosyl transferases group 1 204 334 3.9E-18 T 28-03-2018 AL504_RS08825 641823a75bbd119beac84b6a88901129 820 Gene3D G3DSA:1.20.5.1230 17 714 2.4E-11 T 28-03-2018 AL504_RS08825 641823a75bbd119beac84b6a88901129 820 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 264 334 3.5E-8 T 28-03-2018 IPR013491 Caudovirus, tape measure, N-terminal AL504_RS10550 d1769114bc0c5838a0af71b92fcb6ecf 212 Pfam PF13590 Domain of unknown function (DUF4136) 36 199 7.9E-25 T 28-03-2018 IPR025411 Domain of unknown function DUF4136 AL504_RS12375 007b1797ebf7bd7a2e0d8cb1961b10c4 185 PIRSF PIRSF016661 1 183 3.6E-46 T 28-03-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AL504_RS12375 007b1797ebf7bd7a2e0d8cb1961b10c4 185 Pfam PF02632 BioY family 30 177 2.2E-38 T 28-03-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AL504_RS31145 78db153ae034b601ccab1e3fc024e797 396 Gene3D G3DSA:1.20.1250.20 207 396 5.2E-10 T 28-03-2018 AL504_RS31145 78db153ae034b601ccab1e3fc024e797 396 Gene3D G3DSA:1.20.1250.20 2 198 7.1E-9 T 28-03-2018 AL504_RS31145 78db153ae034b601ccab1e3fc024e797 396 Pfam PF07690 Major Facilitator Superfamily 19 207 2.8E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS31145 78db153ae034b601ccab1e3fc024e797 396 SUPERFAMILY SSF103473 14 391 1.83E-24 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS06635 57c2a746bae1f9c19c7d82154b5047cc 302 Gene3D G3DSA:1.10.10.10 3 83 1.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06635 57c2a746bae1f9c19c7d82154b5047cc 302 SUPERFAMILY SSF46785 3 111 2.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06635 57c2a746bae1f9c19c7d82154b5047cc 302 Pfam PF03466 LysR substrate binding domain 88 295 5.0E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS06635 57c2a746bae1f9c19c7d82154b5047cc 302 SUPERFAMILY SSF53850 89 299 1.03E-38 T 28-03-2018 AL504_RS06635 57c2a746bae1f9c19c7d82154b5047cc 302 Gene3D G3DSA:3.40.190.10 89 173 7.4E-11 T 28-03-2018 AL504_RS06635 57c2a746bae1f9c19c7d82154b5047cc 302 Gene3D G3DSA:3.40.190.10 174 267 1.1E-23 T 28-03-2018 AL504_RS06635 57c2a746bae1f9c19c7d82154b5047cc 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS30000 98574715c9758810bfa18a6cb14ceaf7 492 SUPERFAMILY SSF53383 43 462 2.36E-74 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS30000 98574715c9758810bfa18a6cb14ceaf7 492 Gene3D G3DSA:3.90.1150.10 315 461 2.6E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS30000 98574715c9758810bfa18a6cb14ceaf7 492 Gene3D G3DSA:3.40.640.10 62 314 7.9E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS30000 98574715c9758810bfa18a6cb14ceaf7 492 Pfam PF00266 Aminotransferase class-V 51 412 8.3E-45 T 28-03-2018 IPR000192 Aminotransferase class V domain AL504_RS06105 63b808cfe008de9a9400f0bb0ff58928 151 Pfam PF11008 Protein of unknown function (DUF2846) 12 110 3.3E-9 T 28-03-2018 IPR022548 Domain of unknown function DUF2846 AL504_RS07230 e24cd810a10dceecf13d573885d6617e 187 Gene3D G3DSA:3.30.1330.80 30 187 1.9E-20 T 28-03-2018 AL504_RS07230 e24cd810a10dceecf13d573885d6617e 187 Pfam PF03479 Domain of unknown function (DUF296) 45 163 6.6E-6 T 28-03-2018 IPR005175 PPC domain AL504_RS07230 e24cd810a10dceecf13d573885d6617e 187 SUPERFAMILY SSF117856 35 182 1.96E-22 T 28-03-2018 AL504_RS27535 6ea1cd1a597824fb42064529e7bdc689 323 SUPERFAMILY SSF52317 1 199 2.68E-29 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS27535 6ea1cd1a597824fb42064529e7bdc689 323 Gene3D G3DSA:1.10.10.60 268 307 1.4E-4 T 28-03-2018 AL504_RS27535 6ea1cd1a597824fb42064529e7bdc689 323 Pfam PF01965 DJ-1/PfpI family 20 181 1.0E-6 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS27535 6ea1cd1a597824fb42064529e7bdc689 323 SMART SM00342 234 311 1.4E-6 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS27535 6ea1cd1a597824fb42064529e7bdc689 323 Pfam PF12833 Helix-turn-helix domain 241 307 2.4E-12 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS27535 6ea1cd1a597824fb42064529e7bdc689 323 Gene3D G3DSA:1.10.10.60 227 267 9.6E-7 T 28-03-2018 AL504_RS27535 6ea1cd1a597824fb42064529e7bdc689 323 Gene3D G3DSA:3.40.50.880 1 226 6.2E-33 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS08940 4055a6038e8bae64b234241bfea99a63 367 Pfam PF07120 Protein of unknown function (DUF1376) 22 110 2.0E-15 T 28-03-2018 IPR010781 Protein of unknown function DUF1376 AL504_RS19265 69e009b7133841008d8881da19029216 302 SUPERFAMILY SSF103481 217 297 6.54E-11 T 28-03-2018 AL504_RS19265 69e009b7133841008d8881da19029216 302 SUPERFAMILY SSF103481 45 140 1.05E-12 T 28-03-2018 AL504_RS19265 69e009b7133841008d8881da19029216 302 Pfam PF00892 EamA-like transporter family 150 291 2.4E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS19265 69e009b7133841008d8881da19029216 302 Pfam PF00892 EamA-like transporter family 12 136 7.8E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS17915 b8a5664488e253eab72f9aa365ce04a6 213 SUPERFAMILY SSF56925 51 213 2.62E-27 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS17915 b8a5664488e253eab72f9aa365ce04a6 213 Gene3D G3DSA:2.40.160.20 30 213 4.7E-34 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS17915 b8a5664488e253eab72f9aa365ce04a6 213 Pfam PF03922 OmpW family 31 213 2.5E-51 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AL504_RS01645 49817cf4362ca169d0a060ae8af455f3 155 SMART SM00347 38 138 4.4E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS01645 49817cf4362ca169d0a060ae8af455f3 155 Gene3D G3DSA:1.10.10.10 2 152 2.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01645 49817cf4362ca169d0a060ae8af455f3 155 SUPERFAMILY SSF46785 11 150 1.5E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01645 49817cf4362ca169d0a060ae8af455f3 155 Pfam PF01047 MarR family 45 103 7.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS01915 e57bd37e5af14c6be92fca93dbae2a29 174 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 164 1.1E-59 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL504_RS01915 e57bd37e5af14c6be92fca93dbae2a29 174 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 166 4.0E-58 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL504_RS01915 e57bd37e5af14c6be92fca93dbae2a29 174 PIRSF PIRSF028301 2 174 2.8E-65 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL504_RS24850 eccd1e6c61e78770363eb5febde518dd 121 Pfam PF07883 Cupin domain 39 94 6.9E-12 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS24850 eccd1e6c61e78770363eb5febde518dd 121 SUPERFAMILY SSF51182 4 108 1.21E-24 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS24850 eccd1e6c61e78770363eb5febde518dd 121 Gene3D G3DSA:2.60.120.10 1 107 7.5E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS07005 a0d748635d5662de507791122cfed1a7 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 8.5E-79 T 28-03-2018 AL504_RS07005 a0d748635d5662de507791122cfed1a7 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 257 1.5E-77 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AL504_RS07005 a0d748635d5662de507791122cfed1a7 260 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 214 225 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AL504_RS07005 a0d748635d5662de507791122cfed1a7 260 SUPERFAMILY SSF56219 1 258 2.75E-79 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS07005 a0d748635d5662de507791122cfed1a7 260 Gene3D G3DSA:3.60.10.10 1 259 1.5E-52 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS07005 a0d748635d5662de507791122cfed1a7 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 250 5.0E-21 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 2.6E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.8E-17 T 28-03-2018 AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 Gene3D G3DSA:3.30.70.920 56 153 4.4E-22 T 28-03-2018 AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 Gene3D G3DSA:1.10.10.10 4 55 2.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 SMART SM00344 3 112 3.9E-37 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 SUPERFAMILY SSF46785 2 63 3.71E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 SUPERFAMILY SSF54909 63 148 8.45E-17 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.3E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.3E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS25090 2ebc215cc42cb96f019527613e466620 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.3E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS23650 b5237688cce03f58b765532453e57f1d 437 Gene3D G3DSA:1.10.3080.10 11 433 5.5E-59 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS23650 b5237688cce03f58b765532453e57f1d 437 Pfam PF00654 Voltage gated chloride channel 78 412 1.4E-66 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS23650 b5237688cce03f58b765532453e57f1d 437 SUPERFAMILY SSF81340 15 416 9.81E-71 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS23650 b5237688cce03f58b765532453e57f1d 437 PRINTS PR00762 Chloride channel signature 169 188 9.9E-12 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS23650 b5237688cce03f58b765532453e57f1d 437 PRINTS PR00762 Chloride channel signature 118 137 9.9E-12 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS23650 b5237688cce03f58b765532453e57f1d 437 PRINTS PR00762 Chloride channel signature 363 379 9.9E-12 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS11640 dc2e5d39d13ec908df27bdf3bb5d2dd5 107 Pfam PF11804 Protein of unknown function (DUF3325) 3 102 1.0E-33 T 28-03-2018 IPR021762 Protein of unknown function DUF3325 AL504_RS30785 66068a32788a000cd5c08dd58bbcaf40 98 Gene3D G3DSA:2.30.130.30 1 90 1.6E-4 T 28-03-2018 AL504_RS00785 bdd324a958873a6447b3f92a8f4fcb4d 346 Pfam PF04773 FecR protein 128 226 1.4E-17 T 28-03-2018 IPR006860 FecR protein AL504_RS00785 bdd324a958873a6447b3f92a8f4fcb4d 346 Pfam PF16220 Domain of unknown function (DUF4880) 27 68 4.4E-14 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS00785 bdd324a958873a6447b3f92a8f4fcb4d 346 PIRSF PIRSF018266 17 344 3.3E-89 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS09095 feada31642cc762128d975bafcb80785 300 Pfam PF01145 SPFH domain / Band 7 family 24 196 1.7E-25 T 28-03-2018 IPR001107 Band 7 domain AL504_RS09095 feada31642cc762128d975bafcb80785 300 TIGRFAM TIGR01932 hflC: HflC protein 145 285 1.3E-45 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AL504_RS09095 feada31642cc762128d975bafcb80785 300 PIRSF PIRSF005651 1 293 3.4E-87 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AL504_RS09095 feada31642cc762128d975bafcb80785 300 SMART SM00244 20 185 7.5E-26 T 28-03-2018 IPR001107 Band 7 domain AL504_RS09095 feada31642cc762128d975bafcb80785 300 SUPERFAMILY SSF117892 54 191 8.63E-25 T 28-03-2018 IPR001107 Band 7 domain AL504_RS13670 117b2e401eb514a3ec39f15ae87f1f32 453 Gene3D G3DSA:3.30.2010.10 13 103 2.2E-20 T 28-03-2018 AL504_RS13670 117b2e401eb514a3ec39f15ae87f1f32 453 Gene3D G3DSA:1.25.40.10 104 449 2.6E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS13670 117b2e401eb514a3ec39f15ae87f1f32 453 SUPERFAMILY SSF48452 271 423 2.28E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS13670 117b2e401eb514a3ec39f15ae87f1f32 453 Pfam PF01435 Peptidase family M48 27 217 4.1E-34 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL504_RS07745 a7b7d0223a26636aa9591f82cb24f8e0 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 261 1.0E-59 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS07745 a7b7d0223a26636aa9591f82cb24f8e0 263 Gene3D G3DSA:1.10.12.10 220 262 3.1E-14 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS07745 a7b7d0223a26636aa9591f82cb24f8e0 263 Gene3D G3DSA:3.90.226.10 1 219 2.9E-61 T 28-03-2018 AL504_RS07745 a7b7d0223a26636aa9591f82cb24f8e0 263 SUPERFAMILY SSF52096 3 261 7.18E-82 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS30395 11eacf1127d4b21ade889c086097b39b 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 5.4E-25 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL504_RS24475 10ae3e65e2ce8aa38531236d8e343886 150 SUPERFAMILY SSF55729 1 138 4.12E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS24475 10ae3e65e2ce8aa38531236d8e343886 150 Gene3D G3DSA:3.40.630.30 1 140 3.8E-27 T 28-03-2018 AL504_RS24475 10ae3e65e2ce8aa38531236d8e343886 150 Pfam PF13673 Acetyltransferase (GNAT) domain 30 137 2.9E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS23405 9de219bc4f5ff8cb645b38b06ed8fec7 332 Gene3D G3DSA:3.40.190.10 162 254 5.6E-30 T 28-03-2018 AL504_RS23405 9de219bc4f5ff8cb645b38b06ed8fec7 332 SUPERFAMILY SSF53850 73 312 5.57E-50 T 28-03-2018 AL504_RS23405 9de219bc4f5ff8cb645b38b06ed8fec7 332 Gene3D G3DSA:3.40.190.10 57 161 4.3E-5 T 28-03-2018 AL504_RS23405 9de219bc4f5ff8cb645b38b06ed8fec7 332 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 64 299 1.9E-55 T 28-03-2018 AL504_RS23405 9de219bc4f5ff8cb645b38b06ed8fec7 332 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 8 279 1.5E-64 T 28-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 Pfam PF00255 Glutathione peroxidase 4 111 5.7E-43 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.7E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.7E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 PRINTS PR01011 Glutathione peroxidase family signature 123 132 3.7E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 Gene3D G3DSA:3.40.30.10 2 161 3.1E-48 T 28-03-2018 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 PIRSF PIRSF000303 1 163 8.2E-65 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AL504_RS02330 bb88f77c8f7aae7eb4d04a11d89977a1 164 SUPERFAMILY SSF52833 3 159 4.94E-61 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS01315 14b2c4cc930421e055e87a259147de43 217 SUPERFAMILY SSF51735 1 199 3.21E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01315 14b2c4cc930421e055e87a259147de43 217 Pfam PF13460 NAD(P)H-binding 7 152 2.7E-6 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS01315 14b2c4cc930421e055e87a259147de43 217 Gene3D G3DSA:3.40.50.720 1 206 1.0E-12 T 28-03-2018 AL504_RS16790 37a6034019f9ff9d43ffb3605460663a 277 Gene3D G3DSA:3.90.226.10 17 232 1.4E-44 T 28-03-2018 AL504_RS16790 37a6034019f9ff9d43ffb3605460663a 277 Gene3D G3DSA:1.10.12.10 233 275 4.8E-9 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS16790 37a6034019f9ff9d43ffb3605460663a 277 SUPERFAMILY SSF52096 35 271 1.4E-63 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS16790 37a6034019f9ff9d43ffb3605460663a 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 36 272 9.4E-40 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS16790 37a6034019f9ff9d43ffb3605460663a 277 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 116 136 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL504_RS23180 c00a1a9a1a5638bb29fb30296e51e989 427 PIRSF PIRSF006066 1 427 1.8E-137 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS23180 c00a1a9a1a5638bb29fb30296e51e989 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 416 1.2E-99 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS23180 c00a1a9a1a5638bb29fb30296e51e989 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.8E-118 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS29805 7d6a4466f3bcd7a61f28a784acf0f413 141 PIRSF PIRSF004638 1 141 2.2E-23 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 AL504_RS29805 7d6a4466f3bcd7a61f28a784acf0f413 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 2.4E-17 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 AL504_RS05590 a1f1ac15ce5aa26c1adafe25b969f693 70 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 2.9E-23 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 AL504_RS13950 487c3125238957a97a021709a6a9a398 346 Gene3D G3DSA:1.10.3470.10 3 340 1.0E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS13950 487c3125238957a97a021709a6a9a398 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 81 2.6E-6 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS13950 487c3125238957a97a021709a6a9a398 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 116 330 8.0E-14 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS10430 599ebe80ed5d0427b86ad8f414e54965 367 Pfam PF01594 AI-2E family transporter 15 340 1.1E-52 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AL504_RS01150 73f99a34471908f160f78a391d0dce28 415 Gene3D G3DSA:1.20.1250.20 1 196 4.1E-27 T 28-03-2018 AL504_RS01150 73f99a34471908f160f78a391d0dce28 415 Gene3D G3DSA:1.20.1250.20 200 397 4.0E-17 T 28-03-2018 AL504_RS01150 73f99a34471908f160f78a391d0dce28 415 Pfam PF07690 Major Facilitator Superfamily 13 269 7.7E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01150 73f99a34471908f160f78a391d0dce28 415 Pfam PF07690 Major Facilitator Superfamily 284 402 1.5E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS01150 73f99a34471908f160f78a391d0dce28 415 SUPERFAMILY SSF103473 4 389 2.88E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS14180 6390bec2c4bf9773c5731c06acdea89a 179 SUPERFAMILY SSF52540 38 145 1.16E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS14180 6390bec2c4bf9773c5731c06acdea89a 179 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 13 141 8.5E-35 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL504_RS14180 6390bec2c4bf9773c5731c06acdea89a 179 Gene3D G3DSA:3.40.50.300 5 163 9.4E-47 T 28-03-2018 AL504_RS14180 6390bec2c4bf9773c5731c06acdea89a 179 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 150 2.3E-37 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL504_RS23935 ae1e0c6dc3500e058b4f804d3bc31c2f 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 325 4.1E-56 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS23935 ae1e0c6dc3500e058b4f804d3bc31c2f 330 Gene3D G3DSA:3.40.190.10 30 277 4.8E-4 T 28-03-2018 AL504_RS23935 ae1e0c6dc3500e058b4f804d3bc31c2f 330 PIRSF PIRSF017082 1 328 1.7E-58 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS26285 b8340c4e564c8b83aaa0582c6d6bc7e6 887 SUPERFAMILY SSF52540 220 563 6.2E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS26285 b8340c4e564c8b83aaa0582c6d6bc7e6 887 TIGRFAM TIGR03623 TIGR03623: probable DNA repair protein 24 880 1.7E-242 T 28-03-2018 IPR019925 DNA repair protein, predicted AL504_RS26285 b8340c4e564c8b83aaa0582c6d6bc7e6 887 Gene3D G3DSA:3.90.320.10 517 809 5.0E-16 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL504_RS26285 b8340c4e564c8b83aaa0582c6d6bc7e6 887 Pfam PF12705 PD-(D/E)XK nuclease superfamily 608 872 1.4E-18 T 28-03-2018 AL504_RS30580 eceda83e098d2554a2dbe650d705b238 141 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 2 137 1.7E-61 T 28-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AL504_RS30580 eceda83e098d2554a2dbe650d705b238 141 Gene3D G3DSA:3.30.300.20 1 141 7.5E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL504_RS30580 eceda83e098d2554a2dbe650d705b238 141 SUPERFAMILY SSF82784 2 139 8.38E-41 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS30580 eceda83e098d2554a2dbe650d705b238 141 Pfam PF02566 OsmC-like protein 40 136 1.3E-20 T 28-03-2018 IPR003718 OsmC/Ohr family AL504_RS17240 19b8f8db53ae74e44525befe097f33f0 502 SUPERFAMILY SSF160935 34 469 1.7E-108 T 28-03-2018 AL504_RS17240 19b8f8db53ae74e44525befe097f33f0 502 Gene3D G3DSA:2.60.120.600 299 475 7.7E-44 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL504_RS17240 19b8f8db53ae74e44525befe097f33f0 502 Gene3D G3DSA:2.60.40.1610 74 221 2.0E-40 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL504_RS17240 19b8f8db53ae74e44525befe097f33f0 502 Pfam PF06863 Protein of unknown function (DUF1254) 76 204 7.0E-36 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL504_RS17240 19b8f8db53ae74e44525befe097f33f0 502 Pfam PF06742 Protein of unknown function (DUF1214) 351 454 2.0E-31 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL504_RS09830 05dd30bf0bfd3c532ca1ebc427522435 164 Gene3D G3DSA:3.40.50.150 2 157 2.4E-13 T 28-03-2018 AL504_RS09830 05dd30bf0bfd3c532ca1ebc427522435 164 SUPERFAMILY SSF53335 4 159 3.52E-15 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS31360 61326d4a7f23f6ca8c6e17a2ac2fadba 193 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 4 189 7.7E-42 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB AL504_RS31360 61326d4a7f23f6ca8c6e17a2ac2fadba 193 Pfam PF13036 Peptidoglycan-synthase activator LpoB 47 187 1.1E-45 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB AL504_RS31360 61326d4a7f23f6ca8c6e17a2ac2fadba 193 Gene3D G3DSA:3.40.50.10070 60 193 1.6E-11 T 28-03-2018 AL504_RS17970 46644a435d5e156d1937137fa8d717a2 270 PIRSF PIRSF006648 1 266 1.2E-24 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS17970 46644a435d5e156d1937137fa8d717a2 270 Pfam PF01061 ABC-2 type transporter 25 233 1.3E-34 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL504_RS17970 46644a435d5e156d1937137fa8d717a2 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 1.6E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS17970 46644a435d5e156d1937137fa8d717a2 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 72 94 1.6E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS17970 46644a435d5e156d1937137fa8d717a2 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 210 229 1.6E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS05900 42c39fbf2b0169eb2517cf51fcedd68b 277 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 251 4.5E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS05900 42c39fbf2b0169eb2517cf51fcedd68b 277 Gene3D G3DSA:1.10.3470.10 1 269 7.7E-45 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS00335 94817f1398c14e0f95e91accaf3b309b 418 Gene3D G3DSA:3.30.565.40 204 309 2.9E-7 T 28-03-2018 AL504_RS27565 a7631c7bd3c83a0c84da419afd6e8243 205 PIRSF PIRSF006324 1 205 3.9E-43 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS27565 a7631c7bd3c83a0c84da419afd6e8243 205 Pfam PF01810 LysE type translocator 16 200 4.0E-27 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS19420 44fcc1be1efcafd688578c23ecadea48 324 Gene3D G3DSA:1.10.3720.10 2 308 8.6E-38 T 28-03-2018 AL504_RS19420 44fcc1be1efcafd688578c23ecadea48 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 8.5E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS19420 44fcc1be1efcafd688578c23ecadea48 324 SUPERFAMILY SSF161098 90 304 6.7E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS29250 8316353d4d597faa0f99ac55fdabee23 199 Gene3D G3DSA:1.10.357.10 59 195 1.6E-19 T 28-03-2018 AL504_RS29250 8316353d4d597faa0f99ac55fdabee23 199 Gene3D G3DSA:1.10.10.60 1 58 9.3E-12 T 28-03-2018 AL504_RS29250 8316353d4d597faa0f99ac55fdabee23 199 SUPERFAMILY SSF46689 2 73 4.62E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS29250 8316353d4d597faa0f99ac55fdabee23 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 2.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL504_RS29250 8316353d4d597faa0f99ac55fdabee23 199 SUPERFAMILY SSF48498 80 193 2.17E-16 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS07620 e0c8afcee7ce99984fb866335678de9a 287 PIRSF PIRSF006232 2 287 1.6E-89 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL504_RS07620 e0c8afcee7ce99984fb866335678de9a 287 SUPERFAMILY SSF51182 2 286 1.33E-84 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS07620 e0c8afcee7ce99984fb866335678de9a 287 Gene3D G3DSA:2.60.120.10 1 257 2.7E-82 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS07620 e0c8afcee7ce99984fb866335678de9a 287 Pfam PF05726 Pirin C-terminal cupin domain 182 283 5.5E-28 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AL504_RS07620 e0c8afcee7ce99984fb866335678de9a 287 Pfam PF02678 Pirin 20 127 1.9E-35 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL504_RS11385 99e58ae65c509dacc5cdc063455a2f1d 329 Gene3D G3DSA:3.90.25.10 185 329 7.7E-19 T 28-03-2018 AL504_RS11385 99e58ae65c509dacc5cdc063455a2f1d 329 Gene3D G3DSA:3.40.50.720 1 184 7.7E-23 T 28-03-2018 AL504_RS11385 99e58ae65c509dacc5cdc063455a2f1d 329 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 325 2.4E-127 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL504_RS11385 99e58ae65c509dacc5cdc063455a2f1d 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 240 3.6E-42 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS11385 99e58ae65c509dacc5cdc063455a2f1d 329 SUPERFAMILY SSF51735 2 327 8.74E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS11385 99e58ae65c509dacc5cdc063455a2f1d 329 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 328 49.485 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL504_RS10585 32631d4b2e966b31562909ddee44df7f 153 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 15 145 4.4E-32 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein AL504_RS10585 32631d4b2e966b31562909ddee44df7f 153 Gene3D G3DSA:3.40.1230.10 1 150 5.3E-36 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein AL504_RS10585 32631d4b2e966b31562909ddee44df7f 153 SUPERFAMILY SSF64076 13 147 1.15E-30 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein AL504_RS22650 793c7ea5b0171c258d425c1fb73d1e3d 550 Gene3D G3DSA:3.40.50.300 58 134 0.0023 T 28-03-2018 AL504_RS22650 793c7ea5b0171c258d425c1fb73d1e3d 550 SUPERFAMILY SSF52540 5 128 1.4E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS22650 793c7ea5b0171c258d425c1fb73d1e3d 550 Gene3D G3DSA:3.40.50.300 1 57 8.9E-8 T 28-03-2018 AL504_RS22650 793c7ea5b0171c258d425c1fb73d1e3d 550 Pfam PF01926 50S ribosome-binding GTPase 13 109 6.9E-11 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL504_RS19240 e8d59407d154d2ab46076c867fd7c8ba 280 SUPERFAMILY SSF55781 89 260 9.16E-34 T 28-03-2018 IPR029016 GAF domain-like AL504_RS19240 e8d59407d154d2ab46076c867fd7c8ba 280 SMART SM00346 13 105 8.9E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS19240 e8d59407d154d2ab46076c867fd7c8ba 280 SUPERFAMILY SSF46785 16 85 8.75E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19240 e8d59407d154d2ab46076c867fd7c8ba 280 Gene3D G3DSA:3.30.450.40 88 267 1.4E-32 T 28-03-2018 IPR029016 GAF domain-like AL504_RS19240 e8d59407d154d2ab46076c867fd7c8ba 280 Pfam PF09339 IclR helix-turn-helix domain 16 65 7.1E-15 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS19240 e8d59407d154d2ab46076c867fd7c8ba 280 Gene3D G3DSA:1.10.10.10 5 85 5.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS19240 e8d59407d154d2ab46076c867fd7c8ba 280 Pfam PF01614 Bacterial transcriptional regulator 139 258 1.3E-12 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS02125 25bb005d4cdbea00e80095402dfcc855 142 SUPERFAMILY SSF55729 1 135 5.74E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS02125 25bb005d4cdbea00e80095402dfcc855 142 Gene3D G3DSA:3.40.630.30 1 140 2.5E-26 T 28-03-2018 AL504_RS02125 25bb005d4cdbea00e80095402dfcc855 142 Pfam PF00583 Acetyltransferase (GNAT) family 35 129 3.7E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS26540 2eebdfc43634850a00ce914b558cfdd9 381 Pfam PF04116 Fatty acid hydroxylase superfamily 213 346 4.0E-28 T 28-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL504_RS02000 3b9015a5ad276249d20f8e9724af2e43 239 Pfam PF11445 Protein of unknown function (DUF2894) 21 215 7.3E-58 T 28-03-2018 IPR021549 Protein of unknown function DUF2894 AL504_RS23495 90306987103f30f9568eb4e05a84d28d 333 SUPERFAMILY SSF51556 4 331 2.97E-78 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS23495 90306987103f30f9568eb4e05a84d28d 333 Pfam PF04909 Amidohydrolase 5 331 2.8E-49 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS23495 90306987103f30f9568eb4e05a84d28d 333 Gene3D G3DSA:3.20.20.140 1 332 6.9E-65 T 28-03-2018 AL504_RS07875 687dc36eaa0dd3f9859dbe0813b00e1f 246 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS07875 687dc36eaa0dd3f9859dbe0813b00e1f 246 SMART SM00382 31 225 1.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS07875 687dc36eaa0dd3f9859dbe0813b00e1f 246 Gene3D G3DSA:3.40.50.300 1 240 1.5E-57 T 28-03-2018 AL504_RS07875 687dc36eaa0dd3f9859dbe0813b00e1f 246 SUPERFAMILY SSF52540 5 236 2.53E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS07875 687dc36eaa0dd3f9859dbe0813b00e1f 246 Pfam PF00005 ABC transporter 23 160 4.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS27410 b65a43f1c3bb06665492e22d7d818080 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 1.3E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27410 b65a43f1c3bb06665492e22d7d818080 324 SUPERFAMILY SSF161098 89 306 2.35E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27410 b65a43f1c3bb06665492e22d7d818080 324 Gene3D G3DSA:1.10.3720.10 2 308 5.8E-42 T 28-03-2018 AL504_RS26490 c9898e0c59ac8002cc728a8f254f6e72 338 SUPERFAMILY SSF161098 46 323 1.1E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26490 c9898e0c59ac8002cc728a8f254f6e72 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 327 3.6E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS26490 c9898e0c59ac8002cc728a8f254f6e72 338 Gene3D G3DSA:1.10.3720.10 27 325 2.0E-31 T 28-03-2018 AL504_RS26490 c9898e0c59ac8002cc728a8f254f6e72 338 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 37 329 7.1E-91 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AL504_RS29220 408fdf424302e9b5679947173d1cf2db 630 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 213 621 2.4E-96 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS29220 408fdf424302e9b5679947173d1cf2db 630 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 222 623 3.8E-86 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS29220 408fdf424302e9b5679947173d1cf2db 630 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 46 172 4.8E-26 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS23410 97952ef3c8a8f275c2331c98ba35df3c 271 SMART SM00346 18 108 8.9E-11 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS23410 97952ef3c8a8f275c2331c98ba35df3c 271 Gene3D G3DSA:1.10.10.10 1 79 4.9E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23410 97952ef3c8a8f275c2331c98ba35df3c 271 SUPERFAMILY SSF46785 18 92 2.08E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS23410 97952ef3c8a8f275c2331c98ba35df3c 271 Gene3D G3DSA:3.30.450.40 91 271 1.0E-40 T 28-03-2018 IPR029016 GAF domain-like AL504_RS23410 97952ef3c8a8f275c2331c98ba35df3c 271 SUPERFAMILY SSF55781 76 270 8.5E-36 T 28-03-2018 IPR029016 GAF domain-like AL504_RS23410 97952ef3c8a8f275c2331c98ba35df3c 271 Pfam PF09339 IclR helix-turn-helix domain 20 70 5.3E-9 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS23410 97952ef3c8a8f275c2331c98ba35df3c 271 Pfam PF01614 Bacterial transcriptional regulator 137 265 3.3E-11 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS28810 cb082e8312bb856673c2f44d7f320830 328 Gene3D G3DSA:3.40.50.920 197 328 1.4E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS28810 cb082e8312bb856673c2f44d7f320830 328 SMART SM00861 21 186 7.6E-40 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS28810 cb082e8312bb856673c2f44d7f320830 328 SUPERFAMILY SSF52922 192 326 8.77E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL504_RS28810 cb082e8312bb856673c2f44d7f320830 328 Pfam PF02780 Transketolase, C-terminal domain 197 318 5.0E-29 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL504_RS28810 cb082e8312bb856673c2f44d7f320830 328 Gene3D G3DSA:3.40.50.970 29 192 2.4E-38 T 28-03-2018 AL504_RS28810 cb082e8312bb856673c2f44d7f320830 328 Pfam PF02779 Transketolase, pyrimidine binding domain 27 181 3.1E-34 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL504_RS28810 cb082e8312bb856673c2f44d7f320830 328 SUPERFAMILY SSF52518 26 188 7.46E-48 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS06470 eeb2e96700aaf7a1f447705dbc40c79d 158 Gene3D G3DSA:1.20.58.300 2 128 5.3E-25 T 28-03-2018 AL504_RS06470 eeb2e96700aaf7a1f447705dbc40c79d 158 SUPERFAMILY SSF140566 4 128 1.19E-20 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL504_RS06470 eeb2e96700aaf7a1f447705dbc40c79d 158 Pfam PF05130 FlgN protein 4 144 1.1E-24 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL504_RS25585 9b58a15864a9dcde1c06403c661ffe01 253 SMART SM00014 118 231 1.4E-9 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS25585 9b58a15864a9dcde1c06403c661ffe01 253 Gene3D G3DSA:1.20.144.10 21 238 8.1E-19 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS25585 9b58a15864a9dcde1c06403c661ffe01 253 Pfam PF01569 PAP2 superfamily 119 230 9.9E-19 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS25585 9b58a15864a9dcde1c06403c661ffe01 253 SUPERFAMILY SSF48317 31 236 4.71E-31 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL504_RS15970 4c5e4b6a1d5c90a3d4da4753c4633405 203 Gene3D G3DSA:3.40.50.850 1 201 7.7E-38 T 28-03-2018 AL504_RS15970 4c5e4b6a1d5c90a3d4da4753c4633405 203 SUPERFAMILY SSF52499 3 193 7.06E-43 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS15970 4c5e4b6a1d5c90a3d4da4753c4633405 203 Pfam PF00857 Isochorismatase family 7 187 3.0E-34 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS06135 a0bcc35f9cb2f44815d47e4925a5528c 398 Pfam PF02684 Lipid-A-disaccharide synthetase 6 389 1.4E-89 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL504_RS06135 a0bcc35f9cb2f44815d47e4925a5528c 398 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 392 4.1E-94 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL504_RS06135 a0bcc35f9cb2f44815d47e4925a5528c 398 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 2 395 34.715 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL504_RS06135 a0bcc35f9cb2f44815d47e4925a5528c 398 SUPERFAMILY SSF53756 3 369 1.41E-27 T 28-03-2018 AL504_RS06135 a0bcc35f9cb2f44815d47e4925a5528c 398 Gene3D G3DSA:3.40.50.2000 169 377 4.8E-14 T 28-03-2018 AL504_RS11820 367a55d90bf59b3aa73985f645e74b24 171 Pfam PF06271 RDD family 12 157 2.1E-19 T 28-03-2018 IPR010432 RDD AL504_RS23395 95a01328e27ca2ed8ac9dff4fd30dfed 299 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 20 259 6.8E-82 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AL504_RS23395 95a01328e27ca2ed8ac9dff4fd30dfed 299 Gene3D G3DSA:1.10.3720.10 16 262 2.0E-27 T 28-03-2018 AL504_RS23395 95a01328e27ca2ed8ac9dff4fd30dfed 299 SUPERFAMILY SSF161098 66 253 6.15E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS23395 95a01328e27ca2ed8ac9dff4fd30dfed 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 256 2.7E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS20185 8ecfd6d4189901e839aeebf3562a427f 131 Gene3D G3DSA:1.10.10.10 18 123 0.0095 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20185 8ecfd6d4189901e839aeebf3562a427f 131 Pfam PF13663 Domain of unknown function (DUF4148) 96 127 4.7E-6 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS20185 8ecfd6d4189901e839aeebf3562a427f 131 Pfam PF13663 Domain of unknown function (DUF4148) 1 55 6.3E-12 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 Pfam PF07690 Major Facilitator Superfamily 44 431 9.8E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 PRINTS PR01035 Tetracycline resistance protein signature 48 64 6.7E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 PRINTS PR01035 Tetracycline resistance protein signature 161 183 6.7E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 Gene3D G3DSA:1.20.1250.20 27 223 1.0E-29 T 28-03-2018 AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 SUPERFAMILY SSF103473 496 525 3.31E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 SUPERFAMILY SSF103473 270 441 3.31E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 SUPERFAMILY SSF103473 27 222 3.31E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS16740 7da7e70ad8fa41138599d5eba965bf93 527 Gene3D G3DSA:1.20.1250.20 273 527 4.3E-23 T 28-03-2018 AL504_RS12405 110af907128f19422f046795c3073006 258 Pfam PF13616 PPIC-type PPIASE domain 120 220 4.3E-25 T 28-03-2018 AL504_RS12405 110af907128f19422f046795c3073006 258 SUPERFAMILY SSF54534 101 219 2.62E-30 T 28-03-2018 AL504_RS12405 110af907128f19422f046795c3073006 258 Gene3D G3DSA:3.10.50.40 119 243 5.1E-38 T 28-03-2018 AL504_RS12405 110af907128f19422f046795c3073006 258 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 157 178 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL504_RS20160 044c0f90230b366ea1554f343fc877ad 284 Gene3D G3DSA:3.40.50.850 2 284 8.7E-37 T 28-03-2018 AL504_RS20160 044c0f90230b366ea1554f343fc877ad 284 Pfam PF00857 Isochorismatase family 7 277 7.6E-7 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS20160 044c0f90230b366ea1554f343fc877ad 284 SUPERFAMILY SSF52499 6 83 8.24E-14 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS20160 044c0f90230b366ea1554f343fc877ad 284 SUPERFAMILY SSF52499 134 272 8.24E-14 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS04680 5ef681a5113ba4654dc9bdc6d1290e3b 446 PRINTS PR00164 ABC-2 type transport system membrane protein signature 385 404 6.4E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS04680 5ef681a5113ba4654dc9bdc6d1290e3b 446 PRINTS PR00164 ABC-2 type transport system membrane protein signature 365 384 6.4E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS04680 5ef681a5113ba4654dc9bdc6d1290e3b 446 PRINTS PR00164 ABC-2 type transport system membrane protein signature 220 241 6.4E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS04680 5ef681a5113ba4654dc9bdc6d1290e3b 446 PRINTS PR00164 ABC-2 type transport system membrane protein signature 328 352 6.4E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL504_RS04680 5ef681a5113ba4654dc9bdc6d1290e3b 446 Pfam PF01061 ABC-2 type transporter 202 408 7.1E-10 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL504_RS12345 00b7a90ed9e4e15484d697c6c1f34e7c 716 Pfam PF05506 Domain of unknown function (DUF756) 615 691 1.7E-13 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS12345 00b7a90ed9e4e15484d697c6c1f34e7c 716 Pfam PF05506 Domain of unknown function (DUF756) 515 601 2.0E-25 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS12345 00b7a90ed9e4e15484d697c6c1f34e7c 716 Pfam PF04185 Phosphoesterase family 46 445 5.4E-114 T 28-03-2018 IPR007312 Phosphoesterase GO:0016788 AL504_RS12345 00b7a90ed9e4e15484d697c6c1f34e7c 716 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 705 3.7E-276 T 28-03-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AL504_RS12345 00b7a90ed9e4e15484d697c6c1f34e7c 716 Gene3D G3DSA:3.40.720.10 134 450 2.0E-21 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS19470 b4acb1833d7c79633b38efaca847c1bc 388 Gene3D G3DSA:3.40.640.10 40 295 2.4E-60 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS19470 b4acb1833d7c79633b38efaca847c1bc 388 SUPERFAMILY SSF53383 3 388 5.45E-101 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS19470 b4acb1833d7c79633b38efaca847c1bc 388 Gene3D G3DSA:3.90.1150.10 296 388 9.4E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS19470 b4acb1833d7c79633b38efaca847c1bc 388 Pfam PF00155 Aminotransferase class I and II 26 385 2.4E-58 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS08270 2ad7ff7e62c12e04097e33be7ae110af 317 SUPERFAMILY SSF53187 16 313 8.03E-51 T 28-03-2018 AL504_RS08270 2ad7ff7e62c12e04097e33be7ae110af 317 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 41 251 7.8E-13 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL504_RS08270 2ad7ff7e62c12e04097e33be7ae110af 317 Gene3D G3DSA:3.40.630.10 33 297 1.1E-16 T 28-03-2018 AL504_RS25725 3385c6779f5b5192db808613cacc46a1 291 SUPERFAMILY SSF49401 199 291 3.4E-5 T 28-03-2018 IPR008966 Adhesion domain AL504_RS25725 3385c6779f5b5192db808613cacc46a1 291 Gene3D G3DSA:2.60.40.1090 145 291 1.0E-6 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AL504_RS06705 049f88f4e5885fc70962782344d6930a 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 295 3.9E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS06705 049f88f4e5885fc70962782344d6930a 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 377 1.1E-80 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS06705 049f88f4e5885fc70962782344d6930a 397 SUPERFAMILY SSF111369 52 302 5.49E-86 T 28-03-2018 AL504_RS06705 049f88f4e5885fc70962782344d6930a 397 Gene3D G3DSA:1.20.1600.10 63 349 1.2E-33 T 28-03-2018 AL504_RS26425 2d86a4555bef073f41597d972366164d 143 Gene3D G3DSA:1.20.1170.10 10 140 6.4E-5 T 28-03-2018 AL504_RS26425 2d86a4555bef073f41597d972366164d 143 Pfam PF14282 FlxA-like protein 63 130 1.3E-6 T 28-03-2018 IPR025577 FlxA-like protein AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 SMART SM00491 533 663 1.9E-27 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 SUPERFAMILY SSF52540 191 248 3.1E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 SUPERFAMILY SSF52540 3 113 3.1E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 SUPERFAMILY SSF52540 622 649 3.1E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 Pfam PF06733 DEAD_2 178 253 7.2E-5 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 Pfam PF13307 Helicase C-terminal domain 512 676 2.3E-32 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 Gene3D G3DSA:3.40.50.300 504 685 1.7E-10 T 28-03-2018 AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 SUPERFAMILY SSF52540 518 650 1.34E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11620 dacb63d9b0f944510dfc5bc75175a0ca 695 Gene3D G3DSA:3.40.50.300 23 470 9.2E-28 T 28-03-2018 AL504_RS03965 738a95053df426084ea59f68185b8ce8 241 Gene3D G3DSA:3.30.70.1560 160 218 2.2E-13 T 28-03-2018 AL504_RS03965 738a95053df426084ea59f68185b8ce8 241 SUPERFAMILY SSF55174 6 79 1.31E-13 T 28-03-2018 AL504_RS03965 738a95053df426084ea59f68185b8ce8 241 Pfam PF01479 S4 domain 5 50 1.1E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS03965 738a95053df426084ea59f68185b8ce8 241 SUPERFAMILY SSF55120 67 239 1.93E-19 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL504_RS03965 738a95053df426084ea59f68185b8ce8 241 SMART SM00363 5 70 1.2E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS03965 738a95053df426084ea59f68185b8ce8 241 Gene3D G3DSA:3.30.70.580 62 159 7.4E-13 T 28-03-2018 AL504_RS03965 738a95053df426084ea59f68185b8ce8 241 Gene3D G3DSA:3.10.290.10 1 61 2.9E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS22315 ab7172e8d79d0728d53c90791e213680 486 Gene3D G3DSA:1.20.1250.20 11 485 1.8E-5 T 28-03-2018 AL504_RS22315 ab7172e8d79d0728d53c90791e213680 486 Pfam PF12679 ABC-2 family transporter protein 12 476 5.0E-21 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 AL504_RS09575 35760c858c6565129cd01810c2587755 158 Pfam PF08875 Domain of unknown function (DUF1833) 10 149 2.4E-29 T 28-03-2018 IPR014974 Domain of unknown function DUF1833 AL504_RS29845 59b4a4ea7f2cdf7a2eca21bab0852cba 126 SUPERFAMILY SSF55174 2 100 1.01E-27 T 28-03-2018 AL504_RS29845 59b4a4ea7f2cdf7a2eca21bab0852cba 126 PIRSF PIRSF016821 1 126 1.3E-44 T 28-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AL504_RS29845 59b4a4ea7f2cdf7a2eca21bab0852cba 126 Gene3D G3DSA:3.10.290.10 1 100 3.5E-24 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS29845 59b4a4ea7f2cdf7a2eca21bab0852cba 126 Pfam PF01479 S4 domain 5 50 4.0E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS29845 59b4a4ea7f2cdf7a2eca21bab0852cba 126 SMART SM00363 4 69 4.8E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL504_RS05990 1c779a63d6ee15beaf07bde837283f32 352 SUPERFAMILY SSF56601 45 331 9.98E-55 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS05990 1c779a63d6ee15beaf07bde837283f32 352 Pfam PF00144 Beta-lactamase 53 328 6.3E-19 T 28-03-2018 IPR001466 Beta-lactamase-related AL504_RS05990 1c779a63d6ee15beaf07bde837283f32 352 Gene3D G3DSA:3.40.710.10 18 350 9.4E-39 T 28-03-2018 AL504_RS27905 63a7c453c189aa3ed80977689b150204 461 Gene3D G3DSA:3.90.1300.10 4 454 1.7E-123 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS27905 63a7c453c189aa3ed80977689b150204 461 Pfam PF01425 Amidase 22 444 1.1E-92 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS27905 63a7c453c189aa3ed80977689b150204 461 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 7 457 1.0E-193 T 28-03-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 AL504_RS27905 63a7c453c189aa3ed80977689b150204 461 SUPERFAMILY SSF75304 5 453 1.83E-119 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS05410 b1e16e425622083fb16230746a6d81e4 138 Gene3D G3DSA:3.10.180.10 2 138 9.7E-25 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS05410 b1e16e425622083fb16230746a6d81e4 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 128 9.2E-13 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS05410 b1e16e425622083fb16230746a6d81e4 138 SUPERFAMILY SSF54593 3 134 7.79E-25 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS19475 fdeb1e4fef7db1c0d5588dd475ef94bb 344 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 9 160 8.9E-36 T 28-03-2018 IPR017516 AbrB duplication AL504_RS19475 fdeb1e4fef7db1c0d5588dd475ef94bb 344 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 180 335 1.2E-33 T 28-03-2018 IPR017516 AbrB duplication AL504_RS19475 fdeb1e4fef7db1c0d5588dd475ef94bb 344 PIRSF PIRSF038991 1 344 3.1E-83 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AL504_RS19475 fdeb1e4fef7db1c0d5588dd475ef94bb 344 Pfam PF05145 Transition state regulatory protein AbrB 28 336 5.9E-84 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AL504_RS04170 41b3de74ffd6a3dcfb591b4a6117f9f5 328 Gene3D G3DSA:3.20.20.100 2 320 2.6E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS04170 41b3de74ffd6a3dcfb591b4a6117f9f5 328 Pfam PF00248 Aldo/keto reductase family 17 308 7.1E-72 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS04170 41b3de74ffd6a3dcfb591b4a6117f9f5 328 PRINTS PR00069 Aldo-keto reductase signature 45 69 1.5E-10 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS04170 41b3de74ffd6a3dcfb591b4a6117f9f5 328 PRINTS PR00069 Aldo-keto reductase signature 109 127 1.5E-10 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS04170 41b3de74ffd6a3dcfb591b4a6117f9f5 328 PRINTS PR00069 Aldo-keto reductase signature 140 157 1.5E-10 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL504_RS04170 41b3de74ffd6a3dcfb591b4a6117f9f5 328 SUPERFAMILY SSF51430 5 317 1.44E-92 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL504_RS26635 1551f4bd45719b8d0e07f29fbc716a74 157 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 8.2E-11 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL504_RS21960 5fd608c93497d58e18d408b6673d5785 313 Gene3D G3DSA:1.10.3470.10 1 306 2.8E-41 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS21960 5fd608c93497d58e18d408b6673d5785 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 2.8E-32 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS01250 02c7691e0577a0aa924d5fc02c14f657 309 SUPERFAMILY SSF46689 187 238 4.41E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS01250 02c7691e0577a0aa924d5fc02c14f657 309 SUPERFAMILY SSF46689 240 291 1.3E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS01250 02c7691e0577a0aa924d5fc02c14f657 309 Pfam PF12833 Helix-turn-helix domain 210 285 4.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01250 02c7691e0577a0aa924d5fc02c14f657 309 SMART SM00342 204 287 5.9E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS01250 02c7691e0577a0aa924d5fc02c14f657 309 Gene3D G3DSA:1.10.10.60 245 293 1.0E-11 T 28-03-2018 AL504_RS01250 02c7691e0577a0aa924d5fc02c14f657 309 Gene3D G3DSA:1.10.10.60 186 244 1.7E-13 T 28-03-2018 AL504_RS01250 02c7691e0577a0aa924d5fc02c14f657 309 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 175 9.3E-47 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AL504_RS05285 9638f1d07d149ba62cbd098beccf783f 543 Pfam PF00361 Proton-conducting membrane transporter 137 437 2.1E-34 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS19555 85c350611727de93665d3eb084341a0d 336 Pfam PF13343 Bacterial extracellular solute-binding protein 74 298 2.0E-29 T 28-03-2018 AL504_RS19555 85c350611727de93665d3eb084341a0d 336 PIRSF PIRSF002825 12 335 8.7E-74 T 28-03-2018 IPR026045 Ferric binding protein AL504_RS19555 85c350611727de93665d3eb084341a0d 336 Gene3D G3DSA:3.40.190.10 26 138 7.9E-12 T 28-03-2018 AL504_RS19555 85c350611727de93665d3eb084341a0d 336 SUPERFAMILY SSF53850 24 331 1.54E-63 T 28-03-2018 AL504_RS19555 85c350611727de93665d3eb084341a0d 336 Gene3D G3DSA:3.40.190.10 139 277 8.8E-29 T 28-03-2018 AL504_RS20045 fa086c59e42b29f3f65e3cdaa2cb9b8d 115 Pfam PF03091 CutA1 divalent ion tolerance protein 9 106 1.2E-28 T 28-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AL504_RS20045 fa086c59e42b29f3f65e3cdaa2cb9b8d 115 SUPERFAMILY SSF54913 5 107 1.22E-33 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL504_RS20045 fa086c59e42b29f3f65e3cdaa2cb9b8d 115 Gene3D G3DSA:3.30.70.120 5 111 5.7E-32 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL504_RS21815 3ff905680d8e0127b4b44304f68fda1a 346 Gene3D G3DSA:3.50.30.50 41 346 1.1E-47 T 28-03-2018 AL504_RS21815 3ff905680d8e0127b4b44304f68fda1a 346 Pfam PF04199 Putative cyclase 89 274 1.4E-15 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AL504_RS21815 3ff905680d8e0127b4b44304f68fda1a 346 SUPERFAMILY SSF102198 95 118 6.02E-14 T 28-03-2018 AL504_RS21815 3ff905680d8e0127b4b44304f68fda1a 346 SUPERFAMILY SSF102198 167 345 6.02E-14 T 28-03-2018 AL504_RS00965 0421b501d9d2953ca9a4229986eb2fb1 330 Gene3D G3DSA:3.40.190.10 151 298 7.8E-10 T 28-03-2018 AL504_RS00965 0421b501d9d2953ca9a4229986eb2fb1 330 SUPERFAMILY SSF53850 118 287 5.43E-8 T 28-03-2018 AL504_RS00965 0421b501d9d2953ca9a4229986eb2fb1 330 PIRSF PIRSF017082 1 330 2.2E-79 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00965 0421b501d9d2953ca9a4229986eb2fb1 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 326 1.6E-82 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS15205 c11183135e5472267a25f44a6550992f 362 SUPERFAMILY SSF111369 69 282 7.85E-45 T 28-03-2018 AL504_RS15205 c11183135e5472267a25f44a6550992f 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 357 1.1E-80 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS15205 c11183135e5472267a25f44a6550992f 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 278 5.4E-30 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS15205 c11183135e5472267a25f44a6550992f 362 Gene3D G3DSA:3.90.1170.30 31 124 0.0023 T 28-03-2018 AL504_RS15205 c11183135e5472267a25f44a6550992f 362 Gene3D G3DSA:1.20.1600.10 125 296 7.9E-20 T 28-03-2018 AL504_RS03810 bec8106b533345a99edcf581d1f8847c 418 Gene3D G3DSA:3.40.50.720 1 285 1.8E-34 T 28-03-2018 AL504_RS03810 bec8106b533345a99edcf581d1f8847c 418 Pfam PF13781 DoxX-like family 309 408 4.7E-24 T 28-03-2018 IPR025695 DoxX-like family AL504_RS03810 bec8106b533345a99edcf581d1f8847c 418 SUPERFAMILY SSF51735 1 273 9.61E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS03810 bec8106b533345a99edcf581d1f8847c 418 Pfam PF13460 NAD(P)H-binding 7 142 1.5E-13 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS17690 40434a9f6f4757cfd44ca23c071c753c 169 Gene3D G3DSA:2.30.110.10 5 168 5.0E-47 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS17690 40434a9f6f4757cfd44ca23c071c753c 169 Pfam PF01613 Flavin reductase like domain 18 162 1.4E-38 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS17690 40434a9f6f4757cfd44ca23c071c753c 169 SMART SM00903 17 162 1.8E-58 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS17690 40434a9f6f4757cfd44ca23c071c753c 169 SUPERFAMILY SSF50475 8 162 1.77E-47 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS17995 9c67194526acf8d58c02ee8fcfa971b6 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 360 2.7E-96 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL504_RS17995 9c67194526acf8d58c02ee8fcfa971b6 363 Pfam PF00155 Aminotransferase class I and II 30 356 5.1E-48 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS17995 9c67194526acf8d58c02ee8fcfa971b6 363 SUPERFAMILY SSF53383 15 361 1.99E-77 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS17995 9c67194526acf8d58c02ee8fcfa971b6 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 361 55.824 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL504_RS17995 9c67194526acf8d58c02ee8fcfa971b6 363 Gene3D G3DSA:3.40.640.10 42 249 1.0E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS17995 9c67194526acf8d58c02ee8fcfa971b6 363 Gene3D G3DSA:3.90.1150.10 250 363 1.3E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS08755 7a34d89032acedfff289b24820cc203d 253 Pfam PF02498 BRO family, N-terminal domain 13 99 2.9E-25 T 28-03-2018 IPR003497 BRO N-terminal domain AL504_RS08755 7a34d89032acedfff289b24820cc203d 253 SMART SM01040 13 99 4.8E-38 T 28-03-2018 IPR003497 BRO N-terminal domain AL504_RS12355 64cc3d51920b244b17e51b8648d3bf92 254 SUPERFAMILY SSF52540 6 243 1.41E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS12355 64cc3d51920b244b17e51b8648d3bf92 254 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS12355 64cc3d51920b244b17e51b8648d3bf92 254 SMART SM00382 32 218 6.9E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS12355 64cc3d51920b244b17e51b8648d3bf92 254 Pfam PF00005 ABC transporter 25 173 1.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS12355 64cc3d51920b244b17e51b8648d3bf92 254 Gene3D G3DSA:3.40.50.300 4 253 5.1E-52 T 28-03-2018 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 SUPERFAMILY SSF52768 10 306 4.5E-87 T 28-03-2018 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 PRINTS PR00116 Arginase signature 100 115 2.7E-43 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 PRINTS PR00116 Arginase signature 181 199 2.7E-43 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 PRINTS PR00116 Arginase signature 264 278 2.7E-43 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 PRINTS PR00116 Arginase signature 127 154 2.7E-43 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 PRINTS PR00116 Arginase signature 229 258 2.7E-43 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 Gene3D G3DSA:3.40.800.10 4 307 6.3E-79 T 28-03-2018 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 Pfam PF00491 Arginase family 10 302 1.1E-73 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 PIRSF PIRSF036979 4 306 1.8E-28 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 ProSitePatterns PS01053 Arginase family signature. 232 253 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL504_RS04520 f6a5be13e4ec8f63ba14cb1559546fd0 312 TIGRFAM TIGR01229 rocF_arginase: arginase 13 306 3.3E-84 T 28-03-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 AL504_RS13330 46894371d5e8c9049e0f771790c91911 202 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 11 198 35.737 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AL504_RS13330 46894371d5e8c9049e0f771790c91911 202 Pfam PF02669 K+-transporting ATPase, c chain 15 197 3.9E-74 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AL504_RS13330 46894371d5e8c9049e0f771790c91911 202 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 14 198 2.3E-71 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AL504_RS13330 46894371d5e8c9049e0f771790c91911 202 PIRSF PIRSF001296 10 202 1.9E-76 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AL504_RS29130 19f6db8d568c92bebce420ae5f5f27a8 145 SUPERFAMILY SSF51735 27 116 3.1E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS29130 19f6db8d568c92bebce420ae5f5f27a8 145 Gene3D G3DSA:3.90.25.10 20 119 1.2E-16 T 28-03-2018 AL504_RS27960 98d2878c19f83ad1756a797d34c760ec 403 Gene3D G3DSA:2.130.10.10 147 400 1.9E-13 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS27960 98d2878c19f83ad1756a797d34c760ec 403 PIRSF PIRSF028101 27 401 4.0E-106 T 28-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL504_RS27960 98d2878c19f83ad1756a797d34c760ec 403 SUPERFAMILY SSF50969 88 349 1.96E-13 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL504_RS27960 98d2878c19f83ad1756a797d34c760ec 403 Pfam PF07433 Protein of unknown function (DUF1513) 92 399 9.0E-107 T 28-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL504_RS15270 47db23340794b79d17ca45507a489585 143 Pfam PF13581 Histidine kinase-like ATPase domain 13 137 1.2E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15270 47db23340794b79d17ca45507a489585 143 SUPERFAMILY SSF55874 38 133 5.57E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS15270 47db23340794b79d17ca45507a489585 143 Gene3D G3DSA:3.30.565.10 4 139 4.4E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 Pfam PF00459 Inositol monophosphatase family 16 260 5.8E-50 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 16 263 6.9E-89 T 28-03-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 Gene3D G3DSA:3.30.540.10 9 157 1.4E-42 T 28-03-2018 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 89 102 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 Gene3D G3DSA:3.40.190.80 158 268 2.2E-24 T 28-03-2018 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 69 85 3.0E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 47 67 3.0E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 3.0E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 3.0E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 3.0E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 3.0E-24 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL504_RS19560 ed3706e056a58b95ee89b758de0a6bd0 268 SUPERFAMILY SSF56655 16 263 8.77E-71 T 28-03-2018 AL504_RS26275 1cd4916edf8219832029e17c3f74aa89 317 SUPERFAMILY SSF51412 2 311 1.13E-61 T 28-03-2018 AL504_RS26275 1cd4916edf8219832029e17c3f74aa89 317 Pfam PF03060 Nitronate monooxygenase 5 303 1.7E-59 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS26275 1cd4916edf8219832029e17c3f74aa89 317 Gene3D G3DSA:3.20.20.70 1 315 8.9E-55 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS21205 c94803570c50915b21cb761358999e93 174 Pfam PF09335 SNARE associated Golgi protein 56 161 1.3E-11 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL504_RS20960 69e4e830b074da19456860881515a910 229 Pfam PF00156 Phosphoribosyl transferase domain 54 175 2.5E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL504_RS20960 69e4e830b074da19456860881515a910 229 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 17 202 1.1E-57 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS20960 69e4e830b074da19456860881515a910 229 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 229 32.929 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL504_RS20960 69e4e830b074da19456860881515a910 229 SUPERFAMILY SSF53271 10 226 2.62E-43 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL504_RS20960 69e4e830b074da19456860881515a910 229 Gene3D G3DSA:3.40.50.2020 7 208 2.1E-46 T 28-03-2018 AL504_RS08030 81d7eecbac8ac04dcdb1c97b182ff4c0 185 Pfam PF11659 Protein of unknown function (DUF3261) 47 170 4.3E-6 T 28-03-2018 IPR021675 Protein of unknown function DUF3261 AL504_RS23400 acc1cd4fcc52d43a590389e9ee9eba34 256 SMART SM00382 30 230 4.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23400 acc1cd4fcc52d43a590389e9ee9eba34 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS23400 acc1cd4fcc52d43a590389e9ee9eba34 256 SUPERFAMILY SSF52540 5 240 1.24E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS23400 acc1cd4fcc52d43a590389e9ee9eba34 256 Pfam PF00005 ABC transporter 21 181 5.4E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS23400 acc1cd4fcc52d43a590389e9ee9eba34 256 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 5 250 8.7E-89 T 28-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AL504_RS23400 acc1cd4fcc52d43a590389e9ee9eba34 256 Gene3D G3DSA:3.40.50.300 1 244 2.7E-60 T 28-03-2018 AL504_RS00580 4e75889e9565b794642c8d9d95887331 123 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 121 18.619 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL504_RS00580 4e75889e9565b794642c8d9d95887331 123 TIGRFAM TIGR00494 crcB: protein CrcB 4 117 6.5E-25 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL504_RS00580 4e75889e9565b794642c8d9d95887331 123 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 114 2.1E-22 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL504_RS23060 976ff43f22dd0f12f9422943e3abbeb0 427 Gene3D G3DSA:3.90.1150.10 314 427 1.5E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS23060 976ff43f22dd0f12f9422943e3abbeb0 427 PIRSF PIRSF000521 12 426 4.6E-22 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS23060 976ff43f22dd0f12f9422943e3abbeb0 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS23060 976ff43f22dd0f12f9422943e3abbeb0 427 Gene3D G3DSA:3.40.640.10 40 313 1.9E-72 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS23060 976ff43f22dd0f12f9422943e3abbeb0 427 SUPERFAMILY SSF53383 1 426 1.93E-113 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS23060 976ff43f22dd0f12f9422943e3abbeb0 427 Pfam PF00202 Aminotransferase class-III 14 423 5.8E-84 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL504_RS29320 3caafe8e7d1d65adda106872b7afbeac 180 Gene3D G3DSA:1.10.1740.10 3 70 7.5E-9 T 28-03-2018 AL504_RS29320 3caafe8e7d1d65adda106872b7afbeac 180 Pfam PF04542 Sigma-70 region 2 22 77 1.9E-5 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS29320 3caafe8e7d1d65adda106872b7afbeac 180 Pfam PF08281 Sigma-70, region 4 108 160 9.5E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS29320 3caafe8e7d1d65adda106872b7afbeac 180 SUPERFAMILY SSF88659 91 171 4.36E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS29320 3caafe8e7d1d65adda106872b7afbeac 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 162 4.8E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS29320 3caafe8e7d1d65adda106872b7afbeac 180 Gene3D G3DSA:1.10.10.10 71 167 1.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29320 3caafe8e7d1d65adda106872b7afbeac 180 SUPERFAMILY SSF88946 6 92 7.46E-9 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS05035 d9a75831896d4ae87fbf29251400b35e 206 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 165 2.3E-21 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS10455 9b1dad6a810948edcc058afa95d2a8c1 230 Pfam PF01292 Prokaryotic cytochrome b561 11 180 4.2E-21 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL504_RS10455 9b1dad6a810948edcc058afa95d2a8c1 230 SUPERFAMILY SSF81342 7 189 2.67E-36 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL504_RS10455 9b1dad6a810948edcc058afa95d2a8c1 230 Gene3D G3DSA:1.20.950.20 1 193 5.1E-33 T 28-03-2018 AL504_RS02335 fec2c0a946011577a818b77cf124c5b5 400 Pfam PF07690 Major Facilitator Superfamily 9 339 1.1E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS02335 fec2c0a946011577a818b77cf124c5b5 400 SUPERFAMILY SSF103473 4 376 1.31E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS02335 fec2c0a946011577a818b77cf124c5b5 400 Gene3D G3DSA:1.20.1250.20 188 384 1.1E-14 T 28-03-2018 AL504_RS02335 fec2c0a946011577a818b77cf124c5b5 400 Gene3D G3DSA:1.20.1250.20 3 183 5.7E-27 T 28-03-2018 AL504_RS15845 0c25e940df842c081f2adc7aac640d52 362 Gene3D G3DSA:3.40.50.300 2 260 5.6E-71 T 28-03-2018 AL504_RS15845 0c25e940df842c081f2adc7aac640d52 362 SMART SM00382 28 217 1.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15845 0c25e940df842c081f2adc7aac640d52 362 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS15845 0c25e940df842c081f2adc7aac640d52 362 Pfam PF00005 ABC transporter 19 167 4.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS15845 0c25e940df842c081f2adc7aac640d52 362 SUPERFAMILY SSF50331 243 356 1.53E-7 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL504_RS15845 0c25e940df842c081f2adc7aac640d52 362 SUPERFAMILY SSF52540 4 247 6.59E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15655 5df1df69abbe6e2a999933c6981c2601 337 Pfam PF09084 NMT1/THI5 like 50 260 4.9E-18 T 28-03-2018 IPR015168 SsuA/THI5-like AL504_RS15655 5df1df69abbe6e2a999933c6981c2601 337 Gene3D G3DSA:3.40.190.10 138 337 1.3E-20 T 28-03-2018 AL504_RS15655 5df1df69abbe6e2a999933c6981c2601 337 Gene3D G3DSA:3.40.190.10 33 132 1.1E-7 T 28-03-2018 AL504_RS15655 5df1df69abbe6e2a999933c6981c2601 337 SUPERFAMILY SSF53850 44 288 3.12E-28 T 28-03-2018 AL504_RS23515 84ecf7698ba81759cc33e09ee88ed9de 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS23515 84ecf7698ba81759cc33e09ee88ed9de 485 SUPERFAMILY SSF53720 3 484 1.06E-160 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS23515 84ecf7698ba81759cc33e09ee88ed9de 485 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 6 485 1.0E-252 T 28-03-2018 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 AL504_RS23515 84ecf7698ba81759cc33e09ee88ed9de 485 Gene3D G3DSA:3.40.605.10 1 268 1.2E-90 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS23515 84ecf7698ba81759cc33e09ee88ed9de 485 Gene3D G3DSA:3.40.309.10 269 467 2.0E-71 T 28-03-2018 AL504_RS23515 84ecf7698ba81759cc33e09ee88ed9de 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS23515 84ecf7698ba81759cc33e09ee88ed9de 485 Pfam PF00171 Aldehyde dehydrogenase family 19 481 3.8E-160 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS05920 b8c91a3342b638403d1bc66221986201 481 SUPERFAMILY SSF103473 7 192 7.85E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS05920 b8c91a3342b638403d1bc66221986201 481 SUPERFAMILY SSF103473 249 467 7.85E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS05920 b8c91a3342b638403d1bc66221986201 481 Pfam PF07690 Major Facilitator Superfamily 17 412 1.6E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS05920 b8c91a3342b638403d1bc66221986201 481 Gene3D G3DSA:1.20.1250.20 3 197 8.1E-32 T 28-03-2018 AL504_RS05920 b8c91a3342b638403d1bc66221986201 481 Gene3D G3DSA:1.20.1250.20 260 472 1.7E-23 T 28-03-2018 AL504_RS08865 6d4dcadd40d71e6b0fa9e6f4999c7b6c 124 Pfam PF13262 Protein of unknown function (DUF4054) 11 101 1.1E-9 T 28-03-2018 IPR025127 Protein of unknown function DUF4054 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 Gene3D G3DSA:3.50.50.60 11 380 1.9E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 6.3E-20 T 28-03-2018 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 6.3E-20 T 28-03-2018 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 6.3E-20 T 28-03-2018 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 6.3E-20 T 28-03-2018 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 SUPERFAMILY SSF51905 282 375 1.12E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 SUPERFAMILY SSF51905 15 178 1.12E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS28570 5abcd5b96349bc575db0571e3c29b9cf 384 Pfam PF01494 FAD binding domain 15 356 7.2E-16 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL504_RS02085 518ff8b2d06e91aa36aa0176466c7eb0 267 Gene3D G3DSA:3.30.450.40 82 263 1.6E-35 T 28-03-2018 IPR029016 GAF domain-like AL504_RS02085 518ff8b2d06e91aa36aa0176466c7eb0 267 Pfam PF01614 Bacterial transcriptional regulator 138 257 6.2E-12 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL504_RS02085 518ff8b2d06e91aa36aa0176466c7eb0 267 Gene3D G3DSA:1.10.10.10 14 79 2.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02085 518ff8b2d06e91aa36aa0176466c7eb0 267 SUPERFAMILY SSF55781 83 258 1.13E-32 T 28-03-2018 IPR029016 GAF domain-like AL504_RS02085 518ff8b2d06e91aa36aa0176466c7eb0 267 Pfam PF09339 IclR helix-turn-helix domain 17 68 4.6E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS02085 518ff8b2d06e91aa36aa0176466c7eb0 267 SMART SM00346 15 106 3.7E-16 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL504_RS02085 518ff8b2d06e91aa36aa0176466c7eb0 267 SUPERFAMILY SSF46785 16 89 1.46E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02825 12514318dead1591923c4a34582e77e3 236 Gene3D G3DSA:3.50.30.40 7 199 1.4E-52 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS02825 12514318dead1591923c4a34582e77e3 236 Pfam PF03737 Aldolase/RraA 14 179 3.3E-33 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS02825 12514318dead1591923c4a34582e77e3 236 SUPERFAMILY SSF89562 12 190 5.23E-43 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 Pfam PF00106 short chain dehydrogenase 6 194 1.4E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 Gene3D G3DSA:3.40.50.720 5 244 1.3E-60 T 28-03-2018 AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.0E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.0E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.0E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS22795 58ec7347c14cb3285f947413d955e50e 245 SUPERFAMILY SSF51735 5 240 2.33E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16185 98ca42551448bcd5dcbf8658de2b2b95 62 Pfam PF11943 Protein of unknown function (DUF3460) 4 60 4.3E-29 T 28-03-2018 IPR021853 Protein of unknown function DUF3460 AL504_RS13395 0e03e8e369aa4b82fcc0e31d52642da5 293 Gene3D G3DSA:3.40.50.300 14 223 1.2E-30 T 28-03-2018 AL504_RS13395 0e03e8e369aa4b82fcc0e31d52642da5 293 SUPERFAMILY SSF52540 19 248 9.5E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13395 0e03e8e369aa4b82fcc0e31d52642da5 293 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 41 187 3.1E-14 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL504_RS13395 0e03e8e369aa4b82fcc0e31d52642da5 293 SMART SM00382 37 195 1.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS23045 3c6735a1a154c0c8b098dded2bba4289 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 443 1.4E-89 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS23045 3c6735a1a154c0c8b098dded2bba4289 521 PIRSF PIRSF002741 17 520 2.5E-64 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS23045 3c6735a1a154c0c8b098dded2bba4289 521 Gene3D G3DSA:3.40.190.10 175 285 7.3E-20 T 28-03-2018 AL504_RS23045 3c6735a1a154c0c8b098dded2bba4289 521 Gene3D G3DSA:3.90.76.10 36 174 1.7E-31 T 28-03-2018 AL504_RS23045 3c6735a1a154c0c8b098dded2bba4289 521 Gene3D G3DSA:3.10.105.10 286 494 4.3E-30 T 28-03-2018 AL504_RS23045 3c6735a1a154c0c8b098dded2bba4289 521 SUPERFAMILY SSF53850 23 516 3.8E-104 T 28-03-2018 AL504_RS18110 d1cb8b6497ef740554a2db52f4fba6eb 127 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 120 4.8E-44 T 28-03-2018 IPR009387 Toxin HigB-2 AL504_RS18110 d1cb8b6497ef740554a2db52f4fba6eb 127 PIRSF PIRSF018634 1 124 4.0E-34 T 28-03-2018 IPR009387 Toxin HigB-2 AL504_RS12030 6d64e5908434ad3e1805ba0be15c5595 405 SUPERFAMILY SSF53822 29 403 9.42E-86 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS12030 6d64e5908434ad3e1805ba0be15c5595 405 Gene3D G3DSA:3.40.50.2300 29 160 7.2E-6 T 28-03-2018 AL504_RS12030 6d64e5908434ad3e1805ba0be15c5595 405 Pfam PF13458 Periplasmic binding protein 29 368 4.2E-90 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS12030 6d64e5908434ad3e1805ba0be15c5595 405 Gene3D G3DSA:3.40.50.2300 161 309 6.0E-32 T 28-03-2018 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 Gene3D G3DSA:3.50.50.60 44 221 4.1E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 194 1.2E-9 T 28-03-2018 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 227 252 1.2E-9 T 28-03-2018 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 46 68 1.2E-9 T 28-03-2018 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 Gene3D G3DSA:3.50.50.60 222 459 1.2E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 SUPERFAMILY SSF51905 46 90 6.04E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 SUPERFAMILY SSF51905 134 447 6.04E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 2.8E-6 T 28-03-2018 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 245 2.8E-6 T 28-03-2018 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 47 66 2.8E-6 T 28-03-2018 AL504_RS01010 db6767d85641707b903cad3c4424e487 491 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 128 266 1.5E-16 T 28-03-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AL504_RS25325 72f8d595191ac0ab190a379e96c16ccf 466 Pfam PF07394 Protein of unknown function (DUF1501) 44 401 1.4E-44 T 28-03-2018 IPR010869 Protein of unknown function DUF1501 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 Gene3D G3DSA:3.30.450.20 221 341 4.6E-10 T 28-03-2018 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 Gene3D G3DSA:3.30.450.20 32 220 2.5E-27 T 28-03-2018 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 Pfam PF08269 Cache domain 34 320 9.0E-22 T 28-03-2018 IPR004010 Double Cache domain 2 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 SUPERFAMILY SSF81606 465 665 1.99E-7 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 Gene3D G3DSA:3.60.40.10 414 667 1.0E-40 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 476 666 6.9E-52 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 SMART SM00331 450 666 4.5E-55 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL504_RS15285 61abb19c04b216a091d595b6fe77d195 667 SMART SM01049 67 160 2.6E-6 T 28-03-2018 IPR033480 Single Cache domain 2 AL504_RS24885 cf1f3327fa631db158ea0f0abd620ed8 231 Gene3D G3DSA:2.60.120.620 9 231 4.5E-28 T 28-03-2018 AL504_RS24885 cf1f3327fa631db158ea0f0abd620ed8 231 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 60 230 1.5E-83 T 28-03-2018 IPR018655 Protein of unknown function DUF2086 AL504_RS00900 cc88320b34822ed5d313c313fafbaf34 142 Gene3D G3DSA:3.10.180.10 3 27 4.0E-4 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS00900 cc88320b34822ed5d313c313fafbaf34 142 SUPERFAMILY SSF54593 12 130 1.48E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS00900 cc88320b34822ed5d313c313fafbaf34 142 Gene3D G3DSA:3.10.180.10 28 138 1.5E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS00900 cc88320b34822ed5d313c313fafbaf34 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 124 3.0E-12 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL504_RS17835 b17e150b441b3b7dcfda6bca2f8d08fb 279 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 36.893 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AL504_RS17835 b17e150b441b3b7dcfda6bca2f8d08fb 279 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 1.0E-21 T 28-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AL504_RS17835 b17e150b441b3b7dcfda6bca2f8d08fb 279 SUPERFAMILY SSF56300 17 266 2.48E-50 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS17835 b17e150b441b3b7dcfda6bca2f8d08fb 279 Gene3D G3DSA:3.60.21.10 4 270 2.3E-44 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS17835 b17e150b441b3b7dcfda6bca2f8d08fb 279 Pfam PF00149 Calcineurin-like phosphoesterase 18 206 1.1E-13 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS22645 c507830a93e5f2e8a7cd4bc807a7ca06 356 Gene3D G3DSA:3.50.50.60 156 356 1.4E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22645 c507830a93e5f2e8a7cd4bc807a7ca06 356 Gene3D G3DSA:3.50.50.60 1 155 1.4E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22645 c507830a93e5f2e8a7cd4bc807a7ca06 356 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 1 296 2.0E-79 T 28-03-2018 AL504_RS22645 c507830a93e5f2e8a7cd4bc807a7ca06 356 SUPERFAMILY SSF51905 2 31 8.03E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS22645 c507830a93e5f2e8a7cd4bc807a7ca06 356 SUPERFAMILY SSF51905 71 297 8.03E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS07440 fee7c7257a9f2677b75be8a439a666e6 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 327 1.0E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS07440 fee7c7257a9f2677b75be8a439a666e6 331 Gene3D G3DSA:3.40.190.10 130 241 2.7E-10 T 28-03-2018 AL504_RS07440 fee7c7257a9f2677b75be8a439a666e6 331 PIRSF PIRSF017082 1 330 6.4E-84 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS07440 fee7c7257a9f2677b75be8a439a666e6 331 SUPERFAMILY SSF53850 95 290 8.82E-15 T 28-03-2018 AL504_RS12050 1cbd762808733e09a8ca1bfbad21d833 152 Gene3D G3DSA:3.40.50.10110 1 146 8.9E-47 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL504_RS12050 1cbd762808733e09a8ca1bfbad21d833 152 SUPERFAMILY SSF102400 1 145 1.83E-39 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL504_RS12050 1cbd762808733e09a8ca1bfbad21d833 152 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 140 1.4E-38 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL504_RS18830 01e2ff81ca3332854e71df58fe2a4204 128 Pfam PF06803 Protein of unknown function (DUF1232) 34 69 7.4E-13 T 28-03-2018 IPR010652 Protein of unknown function DUF1232 AL504_RS05080 3cf746cdab9ceb4dcdd1b28a78e4467c 327 Gene3D G3DSA:3.40.190.10 166 323 1.6E-16 T 28-03-2018 AL504_RS05080 3cf746cdab9ceb4dcdd1b28a78e4467c 327 Gene3D G3DSA:3.40.190.10 24 165 9.3E-20 T 28-03-2018 AL504_RS05080 3cf746cdab9ceb4dcdd1b28a78e4467c 327 PIRSF PIRSF002825 10 324 1.0E-73 T 28-03-2018 IPR026045 Ferric binding protein AL504_RS05080 3cf746cdab9ceb4dcdd1b28a78e4467c 327 SUPERFAMILY SSF53850 23 321 2.29E-59 T 28-03-2018 AL504_RS05080 3cf746cdab9ceb4dcdd1b28a78e4467c 327 Pfam PF13343 Bacterial extracellular solute-binding protein 84 279 8.9E-31 T 28-03-2018 AL504_RS01365 faa0b2576a6866dfda36c75ca6ccf29f 313 Gene3D G3DSA:3.40.190.10 90 177 1.3E-18 T 28-03-2018 AL504_RS01365 faa0b2576a6866dfda36c75ca6ccf29f 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.7E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS01365 faa0b2576a6866dfda36c75ca6ccf29f 313 Pfam PF03466 LysR substrate binding domain 91 297 2.1E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS01365 faa0b2576a6866dfda36c75ca6ccf29f 313 Gene3D G3DSA:3.40.190.10 178 268 1.3E-25 T 28-03-2018 AL504_RS01365 faa0b2576a6866dfda36c75ca6ccf29f 313 SUPERFAMILY SSF53850 92 301 9.18E-46 T 28-03-2018 AL504_RS01365 faa0b2576a6866dfda36c75ca6ccf29f 313 Gene3D G3DSA:1.10.10.10 4 86 5.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS01365 faa0b2576a6866dfda36c75ca6ccf29f 313 SUPERFAMILY SSF46785 5 114 1.94E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14240 00c8fb0ed412d741a69813610b86fdb6 298 Pfam PF00294 pfkB family carbohydrate kinase 3 281 2.1E-22 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL504_RS14240 00c8fb0ed412d741a69813610b86fdb6 298 SUPERFAMILY SSF53613 4 289 2.18E-48 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS14240 00c8fb0ed412d741a69813610b86fdb6 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 233 246 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL504_RS14240 00c8fb0ed412d741a69813610b86fdb6 298 Gene3D G3DSA:3.40.1190.20 3 294 1.2E-45 T 28-03-2018 IPR029056 Ribokinase-like AL504_RS14240 00c8fb0ed412d741a69813610b86fdb6 298 PRINTS PR00990 Ribokinase signature 200 211 2.5E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL504_RS14240 00c8fb0ed412d741a69813610b86fdb6 298 PRINTS PR00990 Ribokinase signature 33 52 2.5E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL504_RS14240 00c8fb0ed412d741a69813610b86fdb6 298 PRINTS PR00990 Ribokinase signature 6 27 2.5E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL504_RS06545 4dcf10f88b82e455de861b189a51094b 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 175 6.6E-82 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AL504_RS06545 4dcf10f88b82e455de861b189a51094b 193 SUPERFAMILY SSF160930 6 163 9.55E-60 T 28-03-2018 AL504_RS06545 4dcf10f88b82e455de861b189a51094b 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 190 45.151 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AL504_RS06545 4dcf10f88b82e455de861b189a51094b 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 163 1.0E-83 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AL504_RS06545 4dcf10f88b82e455de861b189a51094b 193 PIRSF PIRSF003159 1 184 1.2E-81 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AL504_RS11110 26adc8f5861fcfb08fb11fef2e9f8c4f 402 SMART SM00833 260 375 1.7E-51 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS11110 26adc8f5861fcfb08fb11fef2e9f8c4f 402 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 214 1.6E-59 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL504_RS11110 26adc8f5861fcfb08fb11fef2e9f8c4f 402 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 375 4.4E-28 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS11110 26adc8f5861fcfb08fb11fef2e9f8c4f 402 Gene3D G3DSA:3.30.1220.10 245 376 6.1E-30 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL504_RS11110 26adc8f5861fcfb08fb11fef2e9f8c4f 402 SUPERFAMILY SSF52540 6 312 1.59E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS11110 26adc8f5861fcfb08fb11fef2e9f8c4f 402 Gene3D G3DSA:3.40.50.300 5 233 1.2E-54 T 28-03-2018 AL504_RS15610 a7f90f56dccbb1c7c4365d32bdabba69 236 SMART SM00382 29 230 1.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS15610 a7f90f56dccbb1c7c4365d32bdabba69 236 Gene3D G3DSA:3.40.50.300 1 234 5.9E-52 T 28-03-2018 AL504_RS15610 a7f90f56dccbb1c7c4365d32bdabba69 236 SUPERFAMILY SSF52540 4 234 1.44E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS15610 a7f90f56dccbb1c7c4365d32bdabba69 236 Pfam PF00005 ABC transporter 21 164 4.4E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS15610 a7f90f56dccbb1c7c4365d32bdabba69 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29500 9b873be5d2cb468bb86506083d76ef1b 203 Pfam PF01810 LysE type translocator 14 188 1.6E-8 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS08420 e21866deed521c662abf2a6b1448a202 304 SUPERFAMILY SSF51735 4 295 4.86E-89 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS08420 e21866deed521c662abf2a6b1448a202 304 Gene3D G3DSA:3.40.50.720 2 197 4.0E-27 T 28-03-2018 AL504_RS08420 e21866deed521c662abf2a6b1448a202 304 Gene3D G3DSA:3.90.25.10 198 284 3.6E-20 T 28-03-2018 AL504_RS08420 e21866deed521c662abf2a6b1448a202 304 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 296 4.9E-93 T 28-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL504_RS08420 e21866deed521c662abf2a6b1448a202 304 Pfam PF04321 RmlD substrate binding domain 4 297 1.7E-98 T 28-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL504_RS24125 d0d9feac876845d220415a282d682605 166 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 141 1.5E-17 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL504_RS24125 d0d9feac876845d220415a282d682605 166 Gene3D G3DSA:3.40.50.2300 2 144 4.6E-37 T 28-03-2018 AL504_RS24125 d0d9feac876845d220415a282d682605 166 SMART SM00226 6 144 3.1E-39 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL504_RS24125 d0d9feac876845d220415a282d682605 166 SUPERFAMILY SSF52788 6 144 2.09E-41 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL504_RS07635 31e8e2b12760a1b347dc4c2a9eb45818 478 Pfam PF02321 Outer membrane efflux protein 65 254 5.1E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS07635 31e8e2b12760a1b347dc4c2a9eb45818 478 Pfam PF02321 Outer membrane efflux protein 286 464 2.7E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS07635 31e8e2b12760a1b347dc4c2a9eb45818 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 466 1.9E-85 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL504_RS07635 31e8e2b12760a1b347dc4c2a9eb45818 478 Gene3D G3DSA:1.20.1600.10 19 472 1.6E-89 T 28-03-2018 AL504_RS07635 31e8e2b12760a1b347dc4c2a9eb45818 478 SUPERFAMILY SSF56954 56 468 1.31E-98 T 28-03-2018 AL504_RS07635 31e8e2b12760a1b347dc4c2a9eb45818 478 SUPERFAMILY SSF56954 4 29 1.31E-98 T 28-03-2018 AL504_RS13185 1896baa603a99985c2bd4aacd4662c9d 375 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 19 127 3.3E-21 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL504_RS13185 1896baa603a99985c2bd4aacd4662c9d 375 SMART SM00922 149 247 5.7E-27 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL504_RS13185 1896baa603a99985c2bd4aacd4662c9d 375 SUPERFAMILY SSF54826 4 127 5.84E-29 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS13185 1896baa603a99985c2bd4aacd4662c9d 375 Gene3D G3DSA:3.20.20.120 135 360 6.1E-61 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS13185 1896baa603a99985c2bd4aacd4662c9d 375 SUPERFAMILY SSF51604 115 367 6.94E-71 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS13185 1896baa603a99985c2bd4aacd4662c9d 375 Gene3D G3DSA:3.30.390.10 3 134 6.6E-33 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL504_RS13185 1896baa603a99985c2bd4aacd4662c9d 375 Pfam PF13378 Enolase C-terminal domain-like 153 362 1.1E-57 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL504_RS05040 7415f78573b970837b0720352f90f0e4 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 278 3.2E-29 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS05040 7415f78573b970837b0720352f90f0e4 348 SUPERFAMILY SSF53850 131 268 2.54E-6 T 28-03-2018 AL504_RS05040 7415f78573b970837b0720352f90f0e4 348 Gene3D G3DSA:3.40.190.10 148 278 1.4E-5 T 28-03-2018 AL504_RS14595 c990952d8f5e9d225395899a153aa181 467 Gene3D G3DSA:1.20.1600.10 37 463 6.9E-43 T 28-03-2018 AL504_RS14595 c990952d8f5e9d225395899a153aa181 467 Pfam PF02321 Outer membrane efflux protein 289 461 1.3E-8 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS14595 c990952d8f5e9d225395899a153aa181 467 Pfam PF02321 Outer membrane efflux protein 73 250 5.1E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS14595 c990952d8f5e9d225395899a153aa181 467 SUPERFAMILY SSF56954 26 462 1.44E-47 T 28-03-2018 AL504_RS26430 dca5bc3c22f38fd8ec23063f27ab80b1 436 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 355 375 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL504_RS26430 dca5bc3c22f38fd8ec23063f27ab80b1 436 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 430 2.4E-105 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL504_RS26430 dca5bc3c22f38fd8ec23063f27ab80b1 436 Pfam PF00860 Permease family 32 408 7.0E-90 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL504_RS04945 3233ed3db8e179a5fa53785c30c36f9f 353 Gene3D G3DSA:3.60.60.10 97 344 5.8E-19 T 28-03-2018 AL504_RS04945 3233ed3db8e179a5fa53785c30c36f9f 353 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 109 332 1.7E-50 T 28-03-2018 IPR005079 Peptidase C45 AL504_RS02400 81bde6fbf5c3b11bcc9ff47be8b22cce 135 Pfam PF07681 DoxX 9 89 2.2E-17 T 28-03-2018 IPR032808 DoxX family AL504_RS30230 e7294df82d99a8ce6fdd1a515b465de6 276 SUPERFAMILY SSF48576 5 275 2.45E-68 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS30230 e7294df82d99a8ce6fdd1a515b465de6 276 Gene3D G3DSA:1.10.600.10 4 276 1.7E-71 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL504_RS30230 e7294df82d99a8ce6fdd1a515b465de6 276 Pfam PF00494 Squalene/phytoene synthase 5 262 2.7E-64 T 28-03-2018 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 AL504_RS30230 e7294df82d99a8ce6fdd1a515b465de6 276 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 2 275 7.8E-115 T 28-03-2018 IPR017827 Squalene synthase HpnC AL504_RS30500 54dfb0d16d769299ea830bdc37ab1ee6 266 Pfam PF00005 ABC transporter 20 180 8.5E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS30500 54dfb0d16d769299ea830bdc37ab1ee6 266 Gene3D G3DSA:3.40.50.300 1 265 4.3E-60 T 28-03-2018 AL504_RS30500 54dfb0d16d769299ea830bdc37ab1ee6 266 SMART SM00382 29 237 4.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS30500 54dfb0d16d769299ea830bdc37ab1ee6 266 SUPERFAMILY SSF52540 4 251 2.24E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS30500 54dfb0d16d769299ea830bdc37ab1ee6 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 1.1E-10 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL504_RS16970 b2699e6a88b1ba42639073ea5fe4fa3e 330 PIRSF PIRSF017082 4 329 1.2E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16970 b2699e6a88b1ba42639073ea5fe4fa3e 330 Gene3D G3DSA:3.40.190.10 159 304 1.2E-11 T 28-03-2018 AL504_RS16970 b2699e6a88b1ba42639073ea5fe4fa3e 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 323 9.2E-88 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS16970 b2699e6a88b1ba42639073ea5fe4fa3e 330 SUPERFAMILY SSF53850 120 298 1.47E-11 T 28-03-2018 AL504_RS21785 06160ee7ad013ad539e06dc3a7d32d5f 403 Gene3D G3DSA:3.40.50.2300 17 201 1.2E-32 T 28-03-2018 AL504_RS21785 06160ee7ad013ad539e06dc3a7d32d5f 403 Pfam PF13458 Periplasmic binding protein 33 377 8.4E-57 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS21785 06160ee7ad013ad539e06dc3a7d32d5f 403 SUPERFAMILY SSF53822 33 391 3.83E-65 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS21785 06160ee7ad013ad539e06dc3a7d32d5f 403 Gene3D G3DSA:3.40.50.2300 202 377 1.9E-18 T 28-03-2018 AL504_RS22365 5b3150d4f6c4086551282a937bd1e312 86 Pfam PF01381 Helix-turn-helix 16 67 8.0E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS22365 5b3150d4f6c4086551282a937bd1e312 86 SUPERFAMILY SSF47413 7 71 4.56E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS22365 5b3150d4f6c4086551282a937bd1e312 86 SMART SM00530 15 70 1.2E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS22365 5b3150d4f6c4086551282a937bd1e312 86 Gene3D G3DSA:1.10.260.40 1 86 1.1E-14 T 28-03-2018 AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 Pfam PF12697 Alpha/beta hydrolase family 40 288 4.3E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 PRINTS PR00412 Epoxide hydrolase signature 107 120 1.7E-9 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 PRINTS PR00412 Epoxide hydrolase signature 271 293 1.7E-9 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 PRINTS PR00412 Epoxide hydrolase signature 44 62 1.7E-9 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 Gene3D G3DSA:3.40.50.1820 14 295 1.7E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 SUPERFAMILY SSF53474 16 295 4.32E-66 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 2.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 2.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS02950 427ec12c8f9caf7a512325d8a25493ba 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 2.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS07485 fdaeb9780ffc06b9cc7b9d1cdf72a4bb 158 Gene3D G3DSA:1.10.1130.10 61 127 4.1E-28 T 28-03-2018 AL504_RS07485 fdaeb9780ffc06b9cc7b9d1cdf72a4bb 158 SUPERFAMILY SSF48695 28 146 3.89E-45 T 28-03-2018 IPR011031 Multihaem cytochrome AL504_RS07485 fdaeb9780ffc06b9cc7b9d1cdf72a4bb 158 PIRSF PIRSF006105 2 155 3.6E-54 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL504_RS07485 fdaeb9780ffc06b9cc7b9d1cdf72a4bb 158 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 26 142 8.4E-48 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL504_RS15240 5a78c192f7c9505107657a1b800d103b 225 Gene3D G3DSA:1.10.3680.10 85 225 1.4E-13 T 28-03-2018 IPR029024 TerB-like AL504_RS15240 5a78c192f7c9505107657a1b800d103b 225 SUPERFAMILY SSF158682 75 223 3.14E-23 T 28-03-2018 AL504_RS15240 5a78c192f7c9505107657a1b800d103b 225 Pfam PF04391 Protein of unknown function (DUF533) 40 220 1.4E-62 T 28-03-2018 IPR007486 Inner membrane protein YebE AL504_RS19060 e39a23a8e25a7981d7c1ef3b5a68ac19 189 Pfam PF01613 Flavin reductase like domain 19 152 2.2E-24 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS19060 e39a23a8e25a7981d7c1ef3b5a68ac19 189 SMART SM00903 14 160 1.4E-31 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AL504_RS19060 e39a23a8e25a7981d7c1ef3b5a68ac19 189 Gene3D G3DSA:2.30.110.10 8 189 1.1E-50 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS19060 e39a23a8e25a7981d7c1ef3b5a68ac19 189 SUPERFAMILY SSF50475 2 181 9.81E-45 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS07890 8ce707d7ae047011b1cb3fb59dac2d3f 152 Pfam PF01638 HxlR-like helix-turn-helix 21 104 7.6E-19 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AL504_RS07890 8ce707d7ae047011b1cb3fb59dac2d3f 152 SUPERFAMILY SSF46785 6 144 3.35E-39 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07890 8ce707d7ae047011b1cb3fb59dac2d3f 152 Gene3D G3DSA:1.10.10.10 2 150 8.4E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02615 56756f68dd21fbd0fdd9acedced56667 536 Pfam PF03929 PepSY-associated TM region 2 377 1.3E-62 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS29420 bdc554cdeb22dfc3cb76798d94bc57bf 307 SUPERFAMILY SSF52540 2 230 9.95E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS29420 bdc554cdeb22dfc3cb76798d94bc57bf 307 Gene3D G3DSA:3.40.50.300 1 248 7.5E-65 T 28-03-2018 AL504_RS29420 bdc554cdeb22dfc3cb76798d94bc57bf 307 Pfam PF00005 ABC transporter 21 163 4.5E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS29420 bdc554cdeb22dfc3cb76798d94bc57bf 307 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS29420 bdc554cdeb22dfc3cb76798d94bc57bf 307 SMART SM00382 30 211 2.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS16680 d782638f314cce8ec794e2ec91cb6c4e 294 Gene3D G3DSA:3.40.50.1820 22 290 2.7E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16680 d782638f314cce8ec794e2ec91cb6c4e 294 SUPERFAMILY SSF53474 18 278 2.63E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS16680 d782638f314cce8ec794e2ec91cb6c4e 294 Pfam PF07859 alpha/beta hydrolase fold 79 171 2.3E-19 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AL504_RS06110 3044465199a35d4756060defc957f32d 146 Pfam PF11008 Protein of unknown function (DUF2846) 7 101 6.2E-9 T 28-03-2018 IPR022548 Domain of unknown function DUF2846 AL504_RS25040 1a5ef7a255ef50c285b88f2d64d31b52 205 Pfam PF02630 SCO1/SenC 51 187 6.6E-41 T 28-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS25040 1a5ef7a255ef50c285b88f2d64d31b52 205 SUPERFAMILY SSF52833 51 204 2.92E-48 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25040 1a5ef7a255ef50c285b88f2d64d31b52 205 Gene3D G3DSA:3.40.30.10 48 205 3.3E-34 T 28-03-2018 AL504_RS15765 600d92ca16cc2715a19d7d8f40a240f7 167 Pfam PF05433 Glycine zipper 2TM domain 76 115 1.0E-8 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL504_RS19750 b041909f6a00af46637e8ab3ec0998a0 446 Gene3D G3DSA:3.30.1890.10 22 387 1.3E-24 T 28-03-2018 AL504_RS07285 da925906948eb20dac2327ffac35d282 324 Gene3D G3DSA:3.40.50.880 27 229 3.4E-65 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS07285 da925906948eb20dac2327ffac35d282 324 Gene3D G3DSA:1.10.10.60 230 300 9.1E-15 T 28-03-2018 AL504_RS07285 da925906948eb20dac2327ffac35d282 324 SMART SM00342 258 317 0.0061 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07285 da925906948eb20dac2327ffac35d282 324 SUPERFAMILY SSF46689 245 292 8.24E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS07285 da925906948eb20dac2327ffac35d282 324 Pfam PF01965 DJ-1/PfpI family 31 202 1.0E-27 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS07285 da925906948eb20dac2327ffac35d282 324 Pfam PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family 251 292 9.9E-12 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL504_RS07285 da925906948eb20dac2327ffac35d282 324 SUPERFAMILY SSF52317 30 223 7.2E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26205 8106017388fabb59de0856794ad4aabf 192 SUPERFAMILY SSF52317 1 186 8.17E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26205 8106017388fabb59de0856794ad4aabf 192 Pfam PF01965 DJ-1/PfpI family 3 184 3.6E-49 T 28-03-2018 IPR002818 DJ-1/PfpI AL504_RS26205 8106017388fabb59de0856794ad4aabf 192 Gene3D G3DSA:3.40.50.880 3 192 1.1E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26205 8106017388fabb59de0856794ad4aabf 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 186 7.1E-53 T 28-03-2018 IPR006286 Peptidase C56, PfpI AL504_RS18650 7647f7dba874830953cd06c44ba0c713 208 PIRSF PIRSF006324 1 208 8.7E-52 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS18650 7647f7dba874830953cd06c44ba0c713 208 Pfam PF01810 LysE type translocator 16 205 4.7E-38 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 1.4E-17 T 28-03-2018 AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.7E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.7E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.7E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 SUPERFAMILY SSF46785 7 64 5.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 SUPERFAMILY SSF54909 70 156 2.15E-17 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 SMART SM00344 7 116 7.5E-34 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 4.6E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 Gene3D G3DSA:3.30.70.920 59 156 3.2E-19 T 28-03-2018 AL504_RS11695 fb1a68ac8603dbbf5a76e0d8153e491e 156 Gene3D G3DSA:1.10.10.10 1 58 1.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS25935 ef9d5a10168630824ef44169a6ee3155 192 SUPERFAMILY SSF52540 7 188 4.28E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25935 ef9d5a10168630824ef44169a6ee3155 192 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 11 186 8.1E-61 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25935 ef9d5a10168630824ef44169a6ee3155 192 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 9 187 34.692 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25935 ef9d5a10168630824ef44169a6ee3155 192 SMART SM00072 9 190 2.3E-4 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL504_RS25935 ef9d5a10168630824ef44169a6ee3155 192 Gene3D G3DSA:3.40.50.300 11 189 1.3E-22 T 28-03-2018 AL504_RS25935 ef9d5a10168630824ef44169a6ee3155 192 Pfam PF13238 AAA domain 13 146 5.7E-7 T 28-03-2018 AL504_RS22515 ad1ed5c0a758c2d6744071ed78de1a3c 348 Pfam PF04055 Radical SAM superfamily 101 260 1.8E-10 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS22515 ad1ed5c0a758c2d6744071ed78de1a3c 348 Gene3D G3DSA:3.20.20.70 85 332 1.5E-23 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS22515 ad1ed5c0a758c2d6744071ed78de1a3c 348 PIRSF PIRSF006004 1 346 2.1E-90 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS22515 ad1ed5c0a758c2d6744071ed78de1a3c 348 SUPERFAMILY SSF102114 99 309 6.02E-12 T 28-03-2018 AL504_RS19405 e4f13cb9a0ebfcc9da9303d02273e143 338 SUPERFAMILY SSF52540 56 323 5.11E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS19405 e4f13cb9a0ebfcc9da9303d02273e143 338 Gene3D G3DSA:3.40.50.300 8 338 2.0E-79 T 28-03-2018 AL504_RS19405 e4f13cb9a0ebfcc9da9303d02273e143 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 250 314 6.5E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS19405 e4f13cb9a0ebfcc9da9303d02273e143 338 SMART SM00382 56 256 8.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS19405 e4f13cb9a0ebfcc9da9303d02273e143 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 334 2.4E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL504_RS19405 e4f13cb9a0ebfcc9da9303d02273e143 338 Pfam PF00005 ABC transporter 49 198 6.9E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS19405 e4f13cb9a0ebfcc9da9303d02273e143 338 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS09000 1b0f8de9ff5557f5737559356ac35345 305 Gene3D G3DSA:3.90.320.10 1 207 5.6E-24 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL504_RS09000 1b0f8de9ff5557f5737559356ac35345 305 Pfam PF09588 YqaJ-like viral recombinase domain 2 145 3.8E-11 T 28-03-2018 IPR019080 YqaJ viral recombinase AL504_RS09000 1b0f8de9ff5557f5737559356ac35345 305 SUPERFAMILY SSF52980 2 189 2.14E-16 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS10895 6fdde9be2b844035645babe7f753ed77 304 PIRSF PIRSF009141 29 292 8.5E-102 T 28-03-2018 IPR008535 Protein of unknown function DUF817 AL504_RS10895 6fdde9be2b844035645babe7f753ed77 304 Pfam PF05675 Protein of unknown function (DUF817) 38 274 2.6E-106 T 28-03-2018 IPR008535 Protein of unknown function DUF817 AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 265 419 1.1E-39 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 Gene3D G3DSA:3.40.50.300 259 460 2.3E-41 T 28-03-2018 AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 SUPERFAMILY SSF53335 7 173 4.58E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 Pfam PF08242 Methyltransferase domain 51 145 4.3E-14 T 28-03-2018 IPR013217 Methyltransferase type 12 AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 SUPERFAMILY SSF52540 263 456 2.98E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 Gene3D G3DSA:3.40.50.150 2 173 2.6E-29 T 28-03-2018 AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 Pfam PF13500 AAA domain 263 451 7.9E-52 T 28-03-2018 AL504_RS27190 eaf477445d467ee3f3e893ad691fb72a 475 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 261 455 26.082 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL504_RS17950 547e67973f1892a401e715f317670fbc 166 Pfam PF02470 MlaD protein 39 116 2.0E-22 T 28-03-2018 IPR003399 Mce/MlaD AL504_RS17950 547e67973f1892a401e715f317670fbc 166 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 146 2.2E-60 T 28-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AL504_RS17515 efd77e2431a7f1a66a092f4fc83656e4 96 Pfam PF02583 Metal-sensitive transcriptional repressor 7 92 1.3E-18 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AL504_RS28340 9bc5f14f7cd34f34de726eb3c241bb60 522 SUPERFAMILY SSF53649 151 492 4.32E-109 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS28340 9bc5f14f7cd34f34de726eb3c241bb60 522 SUPERFAMILY SSF53649 6 109 4.32E-109 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS28340 9bc5f14f7cd34f34de726eb3c241bb60 522 Gene3D G3DSA:3.30.1120.10 428 513 2.4E-14 T 28-03-2018 AL504_RS28340 9bc5f14f7cd34f34de726eb3c241bb60 522 Pfam PF00884 Sulfatase 5 383 7.0E-53 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL504_RS28340 9bc5f14f7cd34f34de726eb3c241bb60 522 Gene3D G3DSA:3.40.720.10 1 418 1.3E-76 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS28620 b612453be99330737a93a95c6b176e5b 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 381 399 1.2E-14 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS28620 b612453be99330737a93a95c6b176e5b 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 284 294 1.2E-14 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS28620 b612453be99330737a93a95c6b176e5b 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 180 190 1.2E-14 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS28620 b612453be99330737a93a95c6b176e5b 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 247 271 1.2E-14 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS28620 b612453be99330737a93a95c6b176e5b 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 404 418 1.2E-14 T 28-03-2018 IPR001775 GspD/PilQ family AL504_RS28620 b612453be99330737a93a95c6b176e5b 460 Pfam PF13629 Pilus formation protein N terminal region 41 115 6.8E-19 T 28-03-2018 IPR032789 Pilus formation protein, N-terminal AL504_RS28620 b612453be99330737a93a95c6b176e5b 460 Pfam PF00263 Bacterial type II and III secretion system protein 251 417 1.2E-43 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL504_RS18415 e0ed620794f70901f80a751a8f346ab4 157 Gene3D G3DSA:3.30.1330.40 1 154 3.0E-31 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS18415 e0ed620794f70901f80a751a8f346ab4 157 SUPERFAMILY SSF55298 4 153 3.77E-51 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS18415 e0ed620794f70901f80a751a8f346ab4 157 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 8 146 1.8E-29 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS09875 3b891d73134bc47481cba1c035c75f51 255 Gene3D G3DSA:3.40.50.620 69 217 1.1E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS09875 3b891d73134bc47481cba1c035c75f51 255 Pfam PF02698 DUF218 domain 80 245 1.4E-32 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AL504_RS00570 e5b32537e9f87bf5240b57f53dee9072 490 Gene3D G3DSA:3.40.630.10 23 224 4.0E-20 T 28-03-2018 AL504_RS00570 e5b32537e9f87bf5240b57f53dee9072 490 Pfam PF01546 Peptidase family M20/M25/M40 107 484 6.2E-22 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL504_RS00570 e5b32537e9f87bf5240b57f53dee9072 490 SUPERFAMILY SSF53187 25 221 6.56E-44 T 28-03-2018 AL504_RS00570 e5b32537e9f87bf5240b57f53dee9072 490 SUPERFAMILY SSF53187 401 485 6.56E-44 T 28-03-2018 AL504_RS00570 e5b32537e9f87bf5240b57f53dee9072 490 Gene3D G3DSA:3.30.70.360 225 396 1.9E-39 T 28-03-2018 AL504_RS00570 e5b32537e9f87bf5240b57f53dee9072 490 Pfam PF07687 Peptidase dimerisation domain 219 383 5.1E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 SUPERFAMILY SSF51735 7 253 1.15E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 1.5E-32 T 28-03-2018 AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 Gene3D G3DSA:3.40.50.720 1 255 1.3E-49 T 28-03-2018 AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS14680 b21d9cec7ae8cb28c2ffc18649eeeb55 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS20255 2f7f1fa8f77fa056752fc167a46192df 288 Gene3D G3DSA:3.60.10.10 4 288 1.1E-31 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS20255 2f7f1fa8f77fa056752fc167a46192df 288 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 278 6.4E-15 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS20255 2f7f1fa8f77fa056752fc167a46192df 288 SUPERFAMILY SSF56219 238 285 6.41E-41 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS20255 2f7f1fa8f77fa056752fc167a46192df 288 SUPERFAMILY SSF56219 4 166 6.41E-41 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL504_RS14980 0fd0695b7ff34d4603f7ca71dd7ab63e 140 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 133 2.2E-51 T 28-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AL504_RS14980 0fd0695b7ff34d4603f7ca71dd7ab63e 140 Gene3D G3DSA:3.10.129.10 2 140 5.3E-40 T 28-03-2018 AL504_RS14980 0fd0695b7ff34d4603f7ca71dd7ab63e 140 PIRSF PIRSF003230 2 140 7.2E-48 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL504_RS14980 0fd0695b7ff34d4603f7ca71dd7ab63e 140 SUPERFAMILY SSF54637 9 137 1.04E-43 T 28-03-2018 IPR029069 HotDog domain AL504_RS14980 0fd0695b7ff34d4603f7ca71dd7ab63e 140 Pfam PF03061 Thioesterase superfamily 23 107 5.9E-20 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS14980 0fd0695b7ff34d4603f7ca71dd7ab63e 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 128 2.3E-34 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL504_RS27805 15b12d34a8023ce3a1c816f7006bf12a 101 SUPERFAMILY SSF51182 2 96 1.97E-17 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS27805 15b12d34a8023ce3a1c816f7006bf12a 101 Pfam PF07883 Cupin domain 37 96 3.7E-13 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL504_RS27805 15b12d34a8023ce3a1c816f7006bf12a 101 Gene3D G3DSA:2.60.120.10 1 99 5.3E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS10385 f9cfc564feac07b9965b8abd86a547cc 146 Pfam PF11681 Protein of unknown function (DUF3277) 1 144 1.9E-63 T 28-03-2018 IPR021695 Bacteriophage rv5, Orf52 AL504_RS21820 9f365050a6a3e8413a26390163af8674 259 Pfam PF00561 alpha/beta hydrolase fold 22 245 2.3E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS21820 9f365050a6a3e8413a26390163af8674 259 Gene3D G3DSA:3.40.50.1820 2 259 6.1E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS21820 9f365050a6a3e8413a26390163af8674 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 258 7.0E-91 T 28-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AL504_RS21820 9f365050a6a3e8413a26390163af8674 259 SUPERFAMILY SSF53474 1 258 1.82E-67 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS21820 9f365050a6a3e8413a26390163af8674 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.0E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS21820 9f365050a6a3e8413a26390163af8674 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.0E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS21820 9f365050a6a3e8413a26390163af8674 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.0E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS18185 c22584f950dc45c2b76ad33f73dabf5c 96 SMART SM00530 28 83 2.0E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS18185 c22584f950dc45c2b76ad33f73dabf5c 96 Pfam PF13560 Helix-turn-helix domain 24 79 3.3E-11 T 28-03-2018 AL504_RS18185 c22584f950dc45c2b76ad33f73dabf5c 96 SUPERFAMILY SSF47413 22 88 8.45E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS18185 c22584f950dc45c2b76ad33f73dabf5c 96 Gene3D G3DSA:1.10.260.40 19 91 3.5E-17 T 28-03-2018 AL504_RS13425 54c7794951e5ecb6e5846ee6ccb16914 128 Pfam PF13663 Domain of unknown function (DUF4148) 94 124 2.4E-8 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS13425 54c7794951e5ecb6e5846ee6ccb16914 128 Pfam PF13663 Domain of unknown function (DUF4148) 1 54 1.9E-7 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS08135 3af176b835f017e7802eb1c11ef22323 390 Pfam PF03929 PepSY-associated TM region 13 365 1.5E-61 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS08135 3af176b835f017e7802eb1c11ef22323 390 Gene3D G3DSA:1.20.950.20 152 383 0.0012 T 28-03-2018 AL504_RS17455 702563a286740cb2fe6e631bfb2ecc8e 329 Gene3D G3DSA:2.60.40.1090 203 329 4.1E-4 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AL504_RS17455 702563a286740cb2fe6e631bfb2ecc8e 329 SMART SM00972 95 165 3.4E-4 T 28-03-2018 IPR007893 Spore coat protein U AL504_RS17455 702563a286740cb2fe6e631bfb2ecc8e 329 SMART SM00972 267 326 1.8E-22 T 28-03-2018 IPR007893 Spore coat protein U AL504_RS17455 702563a286740cb2fe6e631bfb2ecc8e 329 Pfam PF05229 Spore Coat Protein U domain 195 326 2.3E-35 T 28-03-2018 IPR007893 Spore coat protein U AL504_RS17455 702563a286740cb2fe6e631bfb2ecc8e 329 Pfam PF05229 Spore Coat Protein U domain 20 149 4.2E-14 T 28-03-2018 IPR007893 Spore coat protein U AL504_RS25880 4ec9147c9661d228713917ff8aa357e4 88 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.526 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL504_RS25880 4ec9147c9661d228713917ff8aa357e4 88 SUPERFAMILY SSF50249 1 71 1.94E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL504_RS25880 4ec9147c9661d228713917ff8aa357e4 88 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.6E-21 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AL504_RS25880 4ec9147c9661d228713917ff8aa357e4 88 Gene3D G3DSA:2.40.50.140 1 72 2.1E-30 T 28-03-2018 AL504_RS25880 4ec9147c9661d228713917ff8aa357e4 88 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.6E-29 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL504_RS25880 4ec9147c9661d228713917ff8aa357e4 88 SMART SM00316 4 72 0.0038 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL504_RS23865 acdbf50044502759001d8f80e3c90cae 113 Gene3D G3DSA:1.20.1290.10 2 113 7.9E-24 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS23865 acdbf50044502759001d8f80e3c90cae 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 91 4.0E-19 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS23865 acdbf50044502759001d8f80e3c90cae 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 1.5E-19 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS23865 acdbf50044502759001d8f80e3c90cae 113 SUPERFAMILY SSF69118 9 109 6.28E-26 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS29700 84d706e13dd659224bd49a96ac3cf165 536 Pfam PF03169 OPT oligopeptide transporter protein 280 528 3.1E-13 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AL504_RS29700 84d706e13dd659224bd49a96ac3cf165 536 Pfam PF03169 OPT oligopeptide transporter protein 34 248 2.7E-11 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AL504_RS02485 07bb0b2191ffefe05d8524b7350ab20d 695 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 467 595 8.7E-36 T 28-03-2018 IPR025299 CstA, C-terminal domain AL504_RS02485 07bb0b2191ffefe05d8524b7350ab20d 695 Pfam PF02554 Carbon starvation protein CstA 36 412 1.6E-173 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL504_RS26260 8c0b98c00a90cd212abc23fa224dee5c 398 SUPERFAMILY SSF89796 1 398 4.06E-134 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS26260 8c0b98c00a90cd212abc23fa224dee5c 398 Pfam PF02515 CoA-transferase family III 4 374 8.5E-119 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS26260 8c0b98c00a90cd212abc23fa224dee5c 398 Gene3D G3DSA:3.40.50.10540 1 398 2.7E-143 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS12175 d25d911a1cbda825648a36ee6364a58e 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 4.3E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS12175 d25d911a1cbda825648a36ee6364a58e 60 SUPERFAMILY SSF57829 2 55 9.16E-17 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL504_RS12175 d25d911a1cbda825648a36ee6364a58e 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.62 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS12175 d25d911a1cbda825648a36ee6364a58e 60 Pfam PF01783 Ribosomal L32p protein family 2 55 1.1E-17 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL504_RS27065 c0d6d8889987d6a0bbe75fbca2a9a584 489 Gene3D G3DSA:3.90.820.10 223 284 1.2E-4 T 28-03-2018 AL504_RS27065 c0d6d8889987d6a0bbe75fbca2a9a584 489 Gene3D G3DSA:3.90.820.10 2 51 0.045 T 28-03-2018 AL504_RS27065 c0d6d8889987d6a0bbe75fbca2a9a584 489 Pfam PF13785 Domain of unknown function (DUF4178) 278 413 3.5E-13 T 28-03-2018 IPR025235 Domain of unknown function DUF4178 AL504_RS27065 c0d6d8889987d6a0bbe75fbca2a9a584 489 Pfam PF13785 Domain of unknown function (DUF4178) 57 194 7.0E-20 T 28-03-2018 IPR025235 Domain of unknown function DUF4178 AL504_RS07420 7542970e96e341b43e9f0cf3cb7734ff 114 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 49 92 9.9E-6 T 28-03-2018 IPR009241 Toxin HigB-like AL504_RS07420 7542970e96e341b43e9f0cf3cb7734ff 114 PIRSF PIRSF028744 1 108 3.3E-36 T 28-03-2018 IPR014056 Addiction module killer protein, predicted AL504_RS07420 7542970e96e341b43e9f0cf3cb7734ff 114 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 14 103 3.2E-32 T 28-03-2018 IPR014056 Addiction module killer protein, predicted AL504_RS18990 2fe9330b3adc4613c88e41054137039f 876 Pfam PF14351 Domain of unknown function (DUF4401) 351 680 6.8E-66 T 28-03-2018 IPR025513 Domain of unknown function DUF4401 AL504_RS18990 2fe9330b3adc4613c88e41054137039f 876 Pfam PF09925 Predicted membrane protein (DUF2157) 17 137 4.3E-25 T 28-03-2018 IPR018677 Domain of unknown function DUF2157 AL504_RS18990 2fe9330b3adc4613c88e41054137039f 876 Pfam PF14345 GDYXXLXY protein 719 868 1.6E-38 T 28-03-2018 IPR025833 GDYXXLXY protein AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 Gene3D G3DSA:1.10.3080.10 13 450 1.9E-78 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 PRINTS PR00762 Chloride channel signature 127 146 5.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 PRINTS PR00762 Chloride channel signature 178 197 5.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 PRINTS PR00762 Chloride channel signature 395 414 5.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 PRINTS PR00762 Chloride channel signature 341 361 5.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 PRINTS PR00762 Chloride channel signature 377 393 5.4E-26 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 SUPERFAMILY SSF81340 19 441 8.37E-93 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL504_RS19440 d5314fe60d719d00941fb67cb6a714ad 463 Pfam PF00654 Voltage gated chloride channel 85 427 5.5E-81 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL504_RS09130 ee0cfa60532abcdcb7079d19b51a7169 212 Pfam PF09976 Tetratricopeptide repeat-like domain 15 210 4.8E-54 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AL504_RS09130 ee0cfa60532abcdcb7079d19b51a7169 212 PIRSF PIRSF006170 1 212 7.0E-50 T 28-03-2018 IPR026039 Uncharacterised protein family UPF0070 AL504_RS09130 ee0cfa60532abcdcb7079d19b51a7169 212 Gene3D G3DSA:1.25.40.10 8 209 2.4E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS09130 ee0cfa60532abcdcb7079d19b51a7169 212 SUPERFAMILY SSF48452 98 190 9.93E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS23135 667cedd119fc1326935f1b63c8b45a20 377 SUPERFAMILY SSF53756 25 375 4.81E-66 T 28-03-2018 AL504_RS23135 667cedd119fc1326935f1b63c8b45a20 377 Pfam PF00534 Glycosyl transferases group 1 199 352 5.6E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL504_RS23135 667cedd119fc1326935f1b63c8b45a20 377 Gene3D G3DSA:3.40.50.2000 17 196 2.9E-16 T 28-03-2018 AL504_RS23135 667cedd119fc1326935f1b63c8b45a20 377 Gene3D G3DSA:3.40.50.2000 197 367 6.4E-38 T 28-03-2018 AL504_RS23135 667cedd119fc1326935f1b63c8b45a20 377 Pfam PF13477 Glycosyl transferase 4-like 6 156 8.6E-23 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS11705 72613fb7f2e0a7f3d6ccf1b560ab2aea 314 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 10 310 1.9E-153 T 28-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 AL504_RS11705 72613fb7f2e0a7f3d6ccf1b560ab2aea 314 SUPERFAMILY SSF88713 10 311 9.73E-92 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL504_RS11705 72613fb7f2e0a7f3d6ccf1b560ab2aea 314 Gene3D G3DSA:3.20.20.370 6 314 1.2E-60 T 28-03-2018 AL504_RS11705 72613fb7f2e0a7f3d6ccf1b560ab2aea 314 Pfam PF01522 Polysaccharide deacetylase 80 167 3.7E-12 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL504_RS00610 d333927b6024757935c72434249fe855 330 SUPERFAMILY SSF53850 118 281 7.96E-7 T 28-03-2018 AL504_RS00610 d333927b6024757935c72434249fe855 330 PIRSF PIRSF017082 3 325 2.8E-71 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00610 d333927b6024757935c72434249fe855 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 322 2.4E-69 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00610 d333927b6024757935c72434249fe855 330 Gene3D G3DSA:3.40.190.10 125 235 4.2E-8 T 28-03-2018 AL504_RS14965 fc48428efd418b3aa9f22f432808b960 228 SMART SM00448 1 112 7.4E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS14965 fc48428efd418b3aa9f22f432808b960 228 Gene3D G3DSA:1.10.10.10 124 225 1.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS14965 fc48428efd418b3aa9f22f432808b960 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 1.3E-14 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS14965 fc48428efd418b3aa9f22f432808b960 228 SMART SM00862 145 218 5.1E-13 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS14965 fc48428efd418b3aa9f22f432808b960 228 SUPERFAMILY SSF52172 1 174 1.15E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL504_RS14965 fc48428efd418b3aa9f22f432808b960 228 Pfam PF00072 Response regulator receiver domain 3 112 7.6E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL504_RS14965 fc48428efd418b3aa9f22f432808b960 228 Gene3D G3DSA:3.40.50.2300 1 123 7.3E-33 T 28-03-2018 AL504_RS06760 09dd1c6e58282b8bac46915ca5320dfd 292 SUPERFAMILY SSF161098 85 278 1.57E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS06760 09dd1c6e58282b8bac46915ca5320dfd 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 290 3.1E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS06760 09dd1c6e58282b8bac46915ca5320dfd 292 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 59 6.5E-11 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL504_RS06760 09dd1c6e58282b8bac46915ca5320dfd 292 Gene3D G3DSA:1.10.3720.10 15 280 1.6E-52 T 28-03-2018 AL504_RS18035 6b6516a8d65fe6f0cc770c2f7154b0bb 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.5E-23 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL504_RS18035 6b6516a8d65fe6f0cc770c2f7154b0bb 75 Pfam PF02416 mttA/Hcf106 family 5 49 2.2E-13 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL504_RS18035 6b6516a8d65fe6f0cc770c2f7154b0bb 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 74 22.458 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL504_RS28905 5753622efb6f8cb5b980a962708ee117 257 Pfam PF12697 Alpha/beta hydrolase family 35 247 2.8E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS28905 5753622efb6f8cb5b980a962708ee117 257 SUPERFAMILY SSF53474 29 251 7.61E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS28905 5753622efb6f8cb5b980a962708ee117 257 Gene3D G3DSA:3.40.50.1820 18 257 4.2E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS20450 43ccbac3ce8e9f7c0a1adc0ac9fe619e 349 SUPERFAMILY SSF53756 4 345 1.4E-64 T 28-03-2018 AL504_RS20450 43ccbac3ce8e9f7c0a1adc0ac9fe619e 349 Gene3D G3DSA:3.40.50.2000 3 160 5.1E-37 T 28-03-2018 AL504_RS20450 43ccbac3ce8e9f7c0a1adc0ac9fe619e 349 Gene3D G3DSA:3.40.50.2000 193 349 7.2E-27 T 28-03-2018 AL504_RS20450 43ccbac3ce8e9f7c0a1adc0ac9fe619e 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 337 4.8E-73 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL504_RS20450 43ccbac3ce8e9f7c0a1adc0ac9fe619e 349 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 4 346 4.8E-122 T 28-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 AL504_RS25870 96692fbb4996d95a88421487e54b6bc3 278 SUPERFAMILY SSF51261 127 273 3.92E-49 T 28-03-2018 IPR011055 Duplicated hybrid motif AL504_RS25870 96692fbb4996d95a88421487e54b6bc3 278 Pfam PF01551 Peptidase family M23 175 269 5.9E-29 T 28-03-2018 IPR016047 Peptidase M23 AL504_RS25870 96692fbb4996d95a88421487e54b6bc3 278 Gene3D G3DSA:2.70.70.10 118 278 2.2E-42 T 28-03-2018 AL504_RS25870 96692fbb4996d95a88421487e54b6bc3 278 Gene3D G3DSA:2.60.40.1590 25 117 7.1E-34 T 28-03-2018 AL504_RS06025 f0be11e8eeab61ac3a164057186d1a54 229 Pfam PF01988 VIT family 15 222 7.1E-54 T 28-03-2018 IPR008217 Ccc1 family AL504_RS05585 16b47888f19461de814164b3642bab8e 683 Pfam PF04632 Fusaric acid resistance protein family 11 670 5.4E-191 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AL504_RS26075 9058964149b8d359a6c1050b19af02de 302 PIRSF PIRSF036979 8 292 4.1E-65 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS26075 9058964149b8d359a6c1050b19af02de 302 Gene3D G3DSA:3.40.800.10 1 296 2.3E-70 T 28-03-2018 AL504_RS26075 9058964149b8d359a6c1050b19af02de 302 SUPERFAMILY SSF52768 13 287 1.8E-72 T 28-03-2018 AL504_RS26075 9058964149b8d359a6c1050b19af02de 302 Pfam PF00491 Arginase family 15 285 4.5E-68 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL504_RS05960 92256d6dafa8005cc39f320f198e6743 444 Gene3D G3DSA:1.20.1250.20 239 438 1.3E-18 T 28-03-2018 AL504_RS05960 92256d6dafa8005cc39f320f198e6743 444 Pfam PF07690 Major Facilitator Superfamily 253 432 3.7E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS05960 92256d6dafa8005cc39f320f198e6743 444 Pfam PF00083 Sugar (and other) transporter 14 224 3.4E-21 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL504_RS05960 92256d6dafa8005cc39f320f198e6743 444 Gene3D G3DSA:1.20.1250.20 7 226 2.5E-24 T 28-03-2018 AL504_RS05960 92256d6dafa8005cc39f320f198e6743 444 SUPERFAMILY SSF103473 4 425 3.53E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS21680 60a1daf95cc280e60356ac228dbe6a8b 262 Gene3D G3DSA:1.10.580.10 7 140 3.9E-18 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL504_RS21680 60a1daf95cc280e60356ac228dbe6a8b 262 SUPERFAMILY SSF48256 30 242 1.07E-39 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS21680 60a1daf95cc280e60356ac228dbe6a8b 262 Gene3D G3DSA:1.10.580.10 141 234 2.2E-4 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL504_RS21680 60a1daf95cc280e60356ac228dbe6a8b 262 Pfam PF00285 Citrate synthase, C-terminal domain 34 231 1.3E-24 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL504_RS04465 9ddfcd79355bfa572692d824a61bf101 288 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 285 1.5E-78 T 28-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL504_RS04465 9ddfcd79355bfa572692d824a61bf101 288 Pfam PF02666 Phosphatidylserine decarboxylase 65 284 4.8E-62 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL504_RS04465 9ddfcd79355bfa572692d824a61bf101 288 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 12 287 47.909 T 28-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AL504_RS11665 12475803765aea2dbb031370187acf68 318 Pfam PF04773 FecR protein 112 204 1.0E-14 T 28-03-2018 IPR006860 FecR protein AL504_RS11665 12475803765aea2dbb031370187acf68 318 PIRSF PIRSF018266 5 316 6.0E-74 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS11665 12475803765aea2dbb031370187acf68 318 Pfam PF16220 Domain of unknown function (DUF4880) 14 55 4.6E-15 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS12780 6efbcba27cd084f8743af8ca22f6fdd0 336 PIRSF PIRSF018266 2 331 3.1E-79 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS12780 6efbcba27cd084f8743af8ca22f6fdd0 336 Pfam PF16220 Domain of unknown function (DUF4880) 12 55 2.0E-8 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS12780 6efbcba27cd084f8743af8ca22f6fdd0 336 Pfam PF04773 FecR protein 119 211 8.2E-19 T 28-03-2018 IPR006860 FecR protein AL504_RS23795 0268fc3c4868cc52789520c453535c1f 162 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 9 155 9.8E-18 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS23795 0268fc3c4868cc52789520c453535c1f 162 Gene3D G3DSA:3.30.1330.40 3 160 2.6E-21 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS23795 0268fc3c4868cc52789520c453535c1f 162 SUPERFAMILY SSF55298 7 159 3.77E-31 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS00540 cc31e87a21174a32af60acfebc3e55c7 254 SUPERFAMILY SSF56935 71 254 5.5E-6 T 28-03-2018 AL504_RS00540 cc31e87a21174a32af60acfebc3e55c7 254 Pfam PF06629 MltA-interacting protein MipA 30 254 2.7E-46 T 28-03-2018 IPR010583 MltA-interacting MipA AL504_RS00540 cc31e87a21174a32af60acfebc3e55c7 254 Gene3D G3DSA:2.40.160.20 150 254 0.042 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS00540 cc31e87a21174a32af60acfebc3e55c7 254 Gene3D G3DSA:2.40.160.20 19 149 0.0036 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL504_RS22395 1f74f597c5b4d697b62f80af7159ad22 451 Pfam PF02321 Outer membrane efflux protein 31 222 1.6E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS22395 1f74f597c5b4d697b62f80af7159ad22 451 Pfam PF02321 Outer membrane efflux protein 251 429 8.4E-27 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS22395 1f74f597c5b4d697b62f80af7159ad22 451 SUPERFAMILY SSF56954 8 438 1.31E-73 T 28-03-2018 AL504_RS22395 1f74f597c5b4d697b62f80af7159ad22 451 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 28 448 1.1E-87 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL504_RS22395 1f74f597c5b4d697b62f80af7159ad22 451 Gene3D G3DSA:1.20.1600.10 22 441 1.2E-61 T 28-03-2018 AL504_RS04820 42d351ce3c7be26aac5a174c609e6182 407 Gene3D G3DSA:1.10.10.10 297 406 0.0096 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS04820 42d351ce3c7be26aac5a174c609e6182 407 Gene3D G3DSA:3.20.20.70 11 290 1.1E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS04820 42d351ce3c7be26aac5a174c609e6182 407 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 33 376 3.6E-103 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL504_RS04820 42d351ce3c7be26aac5a174c609e6182 407 SUPERFAMILY SSF102114 23 407 8.63E-108 T 28-03-2018 AL504_RS04820 42d351ce3c7be26aac5a174c609e6182 407 SMART SM00729 31 248 4.7E-50 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL504_RS04820 42d351ce3c7be26aac5a174c609e6182 407 Pfam PF06969 HemN C-terminal domain 335 396 4.0E-12 T 28-03-2018 IPR010723 HemN, C-terminal AL504_RS04820 42d351ce3c7be26aac5a174c609e6182 407 Pfam PF04055 Radical SAM superfamily 36 203 1.3E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL504_RS28240 a6560d528dfdd6dd70dffbaf655b853a 198 SUPERFAMILY SSF51735 4 157 8.59E-23 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS28240 a6560d528dfdd6dd70dffbaf655b853a 198 Gene3D G3DSA:3.40.50.720 1 198 1.7E-26 T 28-03-2018 AL504_RS28240 a6560d528dfdd6dd70dffbaf655b853a 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 161 2.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28240 a6560d528dfdd6dd70dffbaf655b853a 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 2.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28240 a6560d528dfdd6dd70dffbaf655b853a 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28240 a6560d528dfdd6dd70dffbaf655b853a 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 2.0E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS28240 a6560d528dfdd6dd70dffbaf655b853a 198 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 157 2.5E-13 T 28-03-2018 AL504_RS09080 755da99d80565cb6b328813dfb3554d4 180 Pfam PF00156 Phosphoribosyl transferase domain 16 161 7.1E-24 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL504_RS09080 755da99d80565cb6b328813dfb3554d4 180 Gene3D G3DSA:3.40.50.2020 9 168 7.5E-24 T 28-03-2018 AL504_RS09080 755da99d80565cb6b328813dfb3554d4 180 SUPERFAMILY SSF53271 6 176 6.03E-35 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL504_RS08790 f62d352fbb3084e8ae9b7ea777cd7d0e 221 Pfam PF11041 Protein of unknown function (DUF2612) 12 191 8.3E-39 T 28-03-2018 IPR021283 Protein of unknown function DUF2612 AL504_RS25055 7ecba93fa9944fb3c7ef3ec514205220 427 SUPERFAMILY SSF55785 339 416 6.7E-6 T 28-03-2018 IPR000014 PAS domain AL504_RS25055 7ecba93fa9944fb3c7ef3ec514205220 427 Pfam PF08447 PAS fold 339 414 5.7E-7 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL504_RS25055 7ecba93fa9944fb3c7ef3ec514205220 427 Gene3D G3DSA:3.30.450.20 241 417 4.0E-9 T 28-03-2018 AL504_RS25055 7ecba93fa9944fb3c7ef3ec514205220 427 Pfam PF05231 MASE1 12 292 3.5E-28 T 28-03-2018 IPR007895 MASE1 AL504_RS27645 17751fc4434e81a03315801fa18e5e9a 244 Pfam PF00419 Fimbrial protein 85 243 6.7E-10 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AL504_RS27645 17751fc4434e81a03315801fa18e5e9a 244 Gene3D G3DSA:2.60.40.1090 83 244 4.0E-29 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AL504_RS27645 17751fc4434e81a03315801fa18e5e9a 244 SUPERFAMILY SSF49401 84 243 1.04E-29 T 28-03-2018 IPR008966 Adhesion domain AL504_RS30870 3f220b5641945c50a46421e80343b30c 158 Pfam PF07102 Protein of unknown function (DUF1364) 51 136 4.8E-16 T 28-03-2018 IPR010774 Protein of unknown function DUF1364 AL504_RS30870 3f220b5641945c50a46421e80343b30c 158 Gene3D G3DSA:3.30.50.20 66 139 1.7E-19 T 28-03-2018 AL504_RS29255 ca30bb988cadcf12925ae58aabb42762 196 Gene3D G3DSA:1.10.357.10 115 188 0.0014 T 28-03-2018 AL504_RS28590 35e06f39e957b6cdd818eebbecce9905 276 Pfam PF03707 Bacterial signalling protein N terminal repeat 123 181 1.3E-15 T 28-03-2018 IPR005330 MHYT domain AL504_RS28590 35e06f39e957b6cdd818eebbecce9905 276 Pfam PF03707 Bacterial signalling protein N terminal repeat 60 117 7.3E-17 T 28-03-2018 IPR005330 MHYT domain AL504_RS19180 c95418696593d9cb20150dcd7f1f0b01 685 Gene3D G3DSA:3.30.420.40 1 306 6.7E-18 T 28-03-2018 AL504_RS19180 c95418696593d9cb20150dcd7f1f0b01 685 SUPERFAMILY SSF53067 1 78 1.47E-13 T 28-03-2018 AL504_RS19180 c95418696593d9cb20150dcd7f1f0b01 685 SUPERFAMILY SSF53067 260 344 1.47E-13 T 28-03-2018 AL504_RS19180 c95418696593d9cb20150dcd7f1f0b01 685 SUPERFAMILY SSF53067 383 482 1.47E-13 T 28-03-2018 AL504_RS19180 c95418696593d9cb20150dcd7f1f0b01 685 Pfam PF01968 Hydantoinase/oxoprolinase 202 488 9.7E-93 T 28-03-2018 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403 AL504_RS19180 c95418696593d9cb20150dcd7f1f0b01 685 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 181 9.3E-62 T 28-03-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403 AL504_RS19180 c95418696593d9cb20150dcd7f1f0b01 685 Gene3D G3DSA:3.40.50.2000 307 657 0.081 T 28-03-2018 AL504_RS06600 395653971241a99d366986dc4a079e1a 250 Pfam PF08889 WbqC-like protein family 13 228 7.3E-66 T 28-03-2018 IPR014985 WbqC-like protein family AL504_RS03190 097c4d03a17aa6f00ab23328f2678fbc 75 SUPERFAMILY SSF160582 1 69 5.62E-28 T 28-03-2018 AL504_RS03190 097c4d03a17aa6f00ab23328f2678fbc 75 Gene3D G3DSA:3.90.820.10 1 67 3.1E-32 T 28-03-2018 AL504_RS03190 097c4d03a17aa6f00ab23328f2678fbc 75 SMART SM00923 2 52 2.9E-25 T 28-03-2018 IPR005153 MbtH-like protein AL504_RS03190 097c4d03a17aa6f00ab23328f2678fbc 75 Pfam PF03621 MbtH-like protein 2 52 2.9E-22 T 28-03-2018 IPR005153 MbtH-like protein AL504_RS11895 ee96945e89755c1f1c823fa1042f3f1c 364 Pfam PF03576 Peptidase family S58 20 344 1.7E-109 T 28-03-2018 IPR005321 Peptidase S58, DmpA AL504_RS11895 ee96945e89755c1f1c823fa1042f3f1c 364 SUPERFAMILY SSF56266 11 359 1.99E-98 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS11895 ee96945e89755c1f1c823fa1042f3f1c 364 Gene3D G3DSA:3.60.70.12 3 360 1.7E-106 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AL504_RS17765 eed6bcdf067cf8e4549fe68752e255c2 228 Pfam PF05433 Glycine zipper 2TM domain 137 177 3.3E-8 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL504_RS23095 80588acf1706a3fa3295ec68b19ddc95 367 Pfam PF00953 Glycosyl transferase family 4 76 230 6.9E-28 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL504_RS04100 6f1e400c5862e91cff277b3d112f72aa 405 Gene3D G3DSA:3.40.190.10 126 327 5.5E-25 T 28-03-2018 AL504_RS04100 6f1e400c5862e91cff277b3d112f72aa 405 SUPERFAMILY SSF53850 31 382 1.82E-43 T 28-03-2018 AL504_RS04100 6f1e400c5862e91cff277b3d112f72aa 405 Pfam PF12849 PBP superfamily domain 29 349 1.9E-31 T 28-03-2018 IPR024370 PBP domain AL504_RS25345 9cf28db9c7acc2786edc1a643f00b332 441 Pfam PF07995 Glucose / Sorbosone dehydrogenase 174 353 2.0E-8 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AL504_RS25345 9cf28db9c7acc2786edc1a643f00b332 441 SUPERFAMILY SSF50952 127 436 4.05E-36 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AL504_RS25345 9cf28db9c7acc2786edc1a643f00b332 441 SUPERFAMILY SSF50952 64 96 4.05E-36 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AL504_RS25345 9cf28db9c7acc2786edc1a643f00b332 441 Gene3D G3DSA:2.120.10.30 326 441 8.6E-14 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS25345 9cf28db9c7acc2786edc1a643f00b332 441 Gene3D G3DSA:2.120.10.30 54 325 4.9E-35 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS00650 34c2173bd19e77349b371d2f97591719 512 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL504_RS00650 34c2173bd19e77349b371d2f97591719 512 Gene3D G3DSA:1.20.1250.20 11 203 4.7E-29 T 28-03-2018 AL504_RS00650 34c2173bd19e77349b371d2f97591719 512 Pfam PF07690 Major Facilitator Superfamily 20 409 1.3E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS00650 34c2173bd19e77349b371d2f97591719 512 Gene3D G3DSA:1.20.1250.20 262 512 1.4E-18 T 28-03-2018 AL504_RS00650 34c2173bd19e77349b371d2f97591719 512 SUPERFAMILY SSF103473 6 200 1.83E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS00650 34c2173bd19e77349b371d2f97591719 512 SUPERFAMILY SSF103473 251 422 1.83E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS00650 34c2173bd19e77349b371d2f97591719 512 SUPERFAMILY SSF103473 471 502 1.83E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS00295 93bd306273cdf8dc70a3cfbaebe7528d 341 Gene3D G3DSA:3.40.50.410 85 299 2.6E-39 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS00295 93bd306273cdf8dc70a3cfbaebe7528d 341 SMART SM00327 91 275 9.8E-17 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS00295 93bd306273cdf8dc70a3cfbaebe7528d 341 SUPERFAMILY SSF53300 89 279 1.78E-33 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS00295 93bd306273cdf8dc70a3cfbaebe7528d 341 Pfam PF00092 von Willebrand factor type A domain 93 275 1.7E-21 T 28-03-2018 IPR002035 von Willebrand factor, type A AL504_RS21390 936442620307bdbd72e36fa38da92e96 533 SUPERFAMILY SSF51261 409 531 2.14E-42 T 28-03-2018 IPR011055 Duplicated hybrid motif AL504_RS21390 936442620307bdbd72e36fa38da92e96 533 Gene3D G3DSA:1.20.5.320 24 134 1.6E-4 T 28-03-2018 AL504_RS21390 936442620307bdbd72e36fa38da92e96 533 Pfam PF01551 Peptidase family M23 434 527 1.7E-25 T 28-03-2018 IPR016047 Peptidase M23 AL504_RS21390 936442620307bdbd72e36fa38da92e96 533 Gene3D G3DSA:2.70.70.10 240 533 2.9E-31 T 28-03-2018 AL504_RS16120 88ef15b126bf581307ec31c47212bd23 417 Pfam PF01266 FAD dependent oxidoreductase 2 400 2.4E-59 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS16120 88ef15b126bf581307ec31c47212bd23 417 SUPERFAMILY SSF51905 1 54 3.37E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16120 88ef15b126bf581307ec31c47212bd23 417 SUPERFAMILY SSF51905 107 272 3.37E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16120 88ef15b126bf581307ec31c47212bd23 417 SUPERFAMILY SSF51905 362 414 3.37E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16120 88ef15b126bf581307ec31c47212bd23 417 Gene3D G3DSA:3.50.50.60 2 416 1.0E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS16120 88ef15b126bf581307ec31c47212bd23 417 SUPERFAMILY SSF54373 272 362 2.75E-12 T 28-03-2018 AL504_RS05120 5f45f9e1b022f1cc047621dbf155f35c 554 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 143 159 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL504_RS05120 5f45f9e1b022f1cc047621dbf155f35c 554 Gene3D G3DSA:1.10.275.10 4 204 8.0E-65 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL504_RS05120 5f45f9e1b022f1cc047621dbf155f35c 554 Gene3D G3DSA:1.20.200.10 206 547 3.2E-104 T 28-03-2018 AL504_RS05120 5f45f9e1b022f1cc047621dbf155f35c 554 SUPERFAMILY SSF48557 3 542 3.3E-159 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL504_RS05120 5f45f9e1b022f1cc047621dbf155f35c 554 Pfam PF00221 Aromatic amino acid lyase 13 507 1.7E-158 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL504_RS30200 5cd640e6f2d99161a67e1b9d3a226118 488 Gene3D G3DSA:3.20.20.140 72 411 4.9E-70 T 28-03-2018 AL504_RS30200 5cd640e6f2d99161a67e1b9d3a226118 488 SUPERFAMILY SSF51338 5 58 1.22E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS30200 5cd640e6f2d99161a67e1b9d3a226118 488 SUPERFAMILY SSF51338 416 462 1.22E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS30200 5cd640e6f2d99161a67e1b9d3a226118 488 Gene3D G3DSA:2.30.40.10 4 71 2.0E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS30200 5cd640e6f2d99161a67e1b9d3a226118 488 Pfam PF07969 Amidohydrolase family 49 278 8.9E-14 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS30200 5cd640e6f2d99161a67e1b9d3a226118 488 Pfam PF07969 Amidohydrolase family 358 461 1.2E-21 T 28-03-2018 IPR013108 Amidohydrolase 3 AL504_RS30200 5cd640e6f2d99161a67e1b9d3a226118 488 SUPERFAMILY SSF51556 59 416 8.62E-81 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS17960 29972a951779fe5c400b964be14150f3 209 PIRSF PIRSF004649 8 209 5.6E-50 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL504_RS17960 29972a951779fe5c400b964be14150f3 209 Gene3D G3DSA:1.10.10.640 172 209 3.6E-7 T 28-03-2018 AL504_RS17960 29972a951779fe5c400b964be14150f3 209 Pfam PF05494 MlaC protein 43 206 1.0E-56 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL504_RS17960 29972a951779fe5c400b964be14150f3 209 Gene3D G3DSA:3.10.450.50 35 83 0.064 T 28-03-2018 AL504_RS17960 29972a951779fe5c400b964be14150f3 209 Gene3D G3DSA:3.10.450.50 84 171 4.6E-27 T 28-03-2018 AL504_RS29225 a07ba337ced79bb2cbefd00338e4b706 340 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 311 5.5E-70 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS29225 a07ba337ced79bb2cbefd00338e4b706 340 PIRSF PIRSF006470 7 337 6.1E-71 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS29225 a07ba337ced79bb2cbefd00338e4b706 340 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 40 291 1.9E-71 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS30315 6936a31d2118f314e607c280655b14cc 309 SUPERFAMILY SSF51569 14 299 1.26E-28 T 28-03-2018 AL504_RS30315 6936a31d2118f314e607c280655b14cc 309 Gene3D G3DSA:3.20.20.70 1 309 1.8E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS30315 6936a31d2118f314e607c280655b14cc 309 SMART SM01130 11 303 8.1E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL504_RS26130 994e61364fb0077655732f48c437d254 519 SUPERFAMILY SSF56801 16 515 1.83E-150 T 28-03-2018 AL504_RS26130 994e61364fb0077655732f48c437d254 519 Gene3D G3DSA:3.40.50.980 5 177 9.2E-40 T 28-03-2018 AL504_RS26130 994e61364fb0077655732f48c437d254 519 Gene3D G3DSA:3.30.300.30 413 518 2.8E-29 T 28-03-2018 AL504_RS26130 994e61364fb0077655732f48c437d254 519 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 8 513 1.9E-237 T 28-03-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 AL504_RS26130 994e61364fb0077655732f48c437d254 519 Gene3D G3DSA:2.30.38.10 333 411 1.4E-20 T 28-03-2018 AL504_RS26130 994e61364fb0077655732f48c437d254 519 Gene3D G3DSA:3.40.50.980 178 332 1.2E-43 T 28-03-2018 AL504_RS26130 994e61364fb0077655732f48c437d254 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 505 1.3E-20 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL504_RS26130 994e61364fb0077655732f48c437d254 519 Pfam PF00501 AMP-binding enzyme 23 419 2.2E-95 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL504_RS25825 971cf80503c2288e9baab3ba6521a7b0 161 SUPERFAMILY SSF55729 11 141 1.42E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS25825 971cf80503c2288e9baab3ba6521a7b0 161 Pfam PF00583 Acetyltransferase (GNAT) family 47 140 3.6E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS25825 971cf80503c2288e9baab3ba6521a7b0 161 Gene3D G3DSA:3.40.630.30 10 149 3.7E-25 T 28-03-2018 AL504_RS09565 7eaa0f5fb8f7ad38474497ff5e0ec1d5 1276 Pfam PF13550 Putative phage tail protein 559 708 1.3E-9 T 28-03-2018 IPR032876 Tip attachment protein J AL504_RS31160 6217b6619802a14f46c372c89b082d50 382 Pfam PF01168 Alanine racemase, N-terminal domain 19 244 8.2E-33 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL504_RS31160 6217b6619802a14f46c372c89b082d50 382 SMART SM01119 259 366 2.9E-39 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL504_RS31160 6217b6619802a14f46c372c89b082d50 382 SUPERFAMILY SSF51419 19 242 1.96E-34 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS31160 6217b6619802a14f46c372c89b082d50 382 Gene3D G3DSA:3.20.20.10 6 246 3.5E-41 T 28-03-2018 IPR029066 PLP-binding barrel AL504_RS31160 6217b6619802a14f46c372c89b082d50 382 Pfam PF14031 Putative serine dehydratase domain 259 365 1.6E-19 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL504_RS26960 e89e0b4dbdbd0d0649a2912c582a14ed 395 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 384 4.3E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS26960 e89e0b4dbdbd0d0649a2912c582a14ed 395 Gene3D G3DSA:1.10.3470.10 45 389 5.4E-30 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS13835 7a0bb66e9e27fe581e19cac35db351b1 177 Pfam PF00857 Isochorismatase family 8 154 3.5E-29 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS13835 7a0bb66e9e27fe581e19cac35db351b1 177 Gene3D G3DSA:3.40.50.850 1 177 4.6E-42 T 28-03-2018 AL504_RS13835 7a0bb66e9e27fe581e19cac35db351b1 177 SUPERFAMILY SSF52499 1 177 7.72E-46 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL504_RS26150 f16dd54dbf2723a10fed115e0bc408c6 475 TIGRFAM TIGR03225 benzo_boxB: benzoyl-CoA oxygenase, B subunit 4 474 7.8E-270 T 28-03-2018 IPR017635 Benzoyl-CoA oxygenase, B subunit KEGG: 00361+1.14.13.20|MetaCyc: PWY-1361|MetaCyc: PWY-6085|MetaCyc: PWY-6086 AL504_RS26150 f16dd54dbf2723a10fed115e0bc408c6 475 Gene3D G3DSA:1.20.1260.10 97 454 7.3E-84 T 28-03-2018 IPR012347 Ferritin-related AL504_RS26150 f16dd54dbf2723a10fed115e0bc408c6 475 SUPERFAMILY SSF47240 107 331 3.57E-48 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS08185 09e7e09e0ab5811c80751049e71ebe1d 339 Gene3D G3DSA:1.10.3720.10 29 325 2.4E-21 T 28-03-2018 AL504_RS08185 09e7e09e0ab5811c80751049e71ebe1d 339 SUPERFAMILY SSF161098 137 314 5.1E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS08185 09e7e09e0ab5811c80751049e71ebe1d 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 324 1.0E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27950 9b6bdcf1e17be4dead51457e63e2c02b 505 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 56 505 2.7E-132 T 28-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL504_RS27950 9b6bdcf1e17be4dead51457e63e2c02b 505 PIRSF PIRSF028099 1 505 2.4E-178 T 28-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL504_RS27950 9b6bdcf1e17be4dead51457e63e2c02b 505 SUPERFAMILY SSF46626 364 505 3.56E-28 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27950 9b6bdcf1e17be4dead51457e63e2c02b 505 Gene3D G3DSA:1.10.760.10 354 505 6.0E-29 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27950 9b6bdcf1e17be4dead51457e63e2c02b 505 Gene3D G3DSA:1.10.760.10 6 353 0.0029 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 SUPERFAMILY SSF103088 98 210 1.7E-36 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 PRINTS PR01021 OMPA domain signature 110 132 7.4E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 PRINTS PR01021 OMPA domain signature 140 155 7.4E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 PRINTS PR01021 OMPA domain signature 155 171 7.4E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 173 192 1.0E-5 T 28-03-2018 AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 193 213 1.0E-5 T 28-03-2018 AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 155 172 1.0E-5 T 28-03-2018 AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 Pfam PF13441 YMGG-like Gly-zipper 30 71 2.2E-8 T 28-03-2018 IPR027367 YMGG-like Gly-zipper AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 Pfam PF00691 OmpA family 110 204 4.5E-19 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS14455 d419d8582caa3d68ac50062ae69761b0 215 Gene3D G3DSA:3.30.1330.60 76 215 2.2E-38 T 28-03-2018 IPR006665 OmpA-like domain AL504_RS18300 14a8135a9bf5196665e35e40052a2526 156 Pfam PF01575 MaoC like domain 21 113 8.2E-26 T 28-03-2018 IPR002539 MaoC-like domain AL504_RS18300 14a8135a9bf5196665e35e40052a2526 156 SUPERFAMILY SSF54637 6 144 4.79E-40 T 28-03-2018 IPR029069 HotDog domain AL504_RS18300 14a8135a9bf5196665e35e40052a2526 156 Gene3D G3DSA:3.10.129.10 3 139 2.2E-35 T 28-03-2018 AL504_RS27710 1b8541e40a9057d864ec082dbfdab6b0 411 Gene3D G3DSA:1.20.1250.20 215 411 3.5E-13 T 28-03-2018 AL504_RS27710 1b8541e40a9057d864ec082dbfdab6b0 411 SUPERFAMILY SSF103473 10 404 4.71E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS27710 1b8541e40a9057d864ec082dbfdab6b0 411 Pfam PF07690 Major Facilitator Superfamily 17 367 5.0E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS27710 1b8541e40a9057d864ec082dbfdab6b0 411 Gene3D G3DSA:1.20.1250.20 2 199 4.7E-13 T 28-03-2018 AL504_RS24295 6e55a3598f9b1f4ca68828a7a1a21669 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 157 1.1E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24295 6e55a3598f9b1f4ca68828a7a1a21669 170 SUPERFAMILY SSF88946 3 74 1.69E-15 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24295 6e55a3598f9b1f4ca68828a7a1a21669 170 Gene3D G3DSA:1.10.1740.10 4 80 6.1E-16 T 28-03-2018 AL504_RS24295 6e55a3598f9b1f4ca68828a7a1a21669 170 Gene3D G3DSA:1.10.10.10 81 166 4.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS24295 6e55a3598f9b1f4ca68828a7a1a21669 170 SUPERFAMILY SSF88659 102 162 3.92E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24295 6e55a3598f9b1f4ca68828a7a1a21669 170 Pfam PF04542 Sigma-70 region 2 12 77 6.2E-13 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS24295 6e55a3598f9b1f4ca68828a7a1a21669 170 Pfam PF08281 Sigma-70, region 4 109 160 4.0E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL504_RS11825 ad5d1d6fc31754eaae85f2475baf1153 302 Pfam PF09935 Protein of unknown function (DUF2167) 47 281 2.2E-80 T 28-03-2018 IPR018682 Protein of unknown function DUF2167, membrane AL504_RS20755 e157b1ff7c19b6c954da87a12d72c162 108 Pfam PF11480 Colicin-E5 Imm protein 24 102 1.9E-14 T 28-03-2018 IPR020127 Colicin-E5 immunity protein GO:0030153 AL504_RS20755 e157b1ff7c19b6c954da87a12d72c162 108 ProDom PD028560 IMMUNITY COLICIN-E5 PLASMID BACTERIOCIN E5IMME9 COLICIN IMME5 MICROCIN-E5 COLE9 24 102 8.0E-32 T 28-03-2018 IPR020127 Colicin-E5 immunity protein GO:0030153 AL504_RS20755 e157b1ff7c19b6c954da87a12d72c162 108 SUPERFAMILY SSF143469 24 104 1.05E-33 T 28-03-2018 AL504_RS26235 be230e7c61a94d822b78e2800391a7a3 254 SUPERFAMILY SSF52096 3 247 9.23E-73 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS26235 be230e7c61a94d822b78e2800391a7a3 254 Gene3D G3DSA:1.10.12.10 215 248 2.6E-4 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS26235 be230e7c61a94d822b78e2800391a7a3 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 245 2.4E-50 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS26235 be230e7c61a94d822b78e2800391a7a3 254 Gene3D G3DSA:3.90.226.10 7 214 2.4E-65 T 28-03-2018 AL504_RS29920 1929d56b45ca9f758ff6b62dbcf15d02 316 Pfam PF00962 Adenosine/AMP deaminase 8 311 2.5E-70 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AL504_RS29920 1929d56b45ca9f758ff6b62dbcf15d02 316 Gene3D G3DSA:3.20.20.140 1 314 2.2E-79 T 28-03-2018 AL504_RS29920 1929d56b45ca9f758ff6b62dbcf15d02 316 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 312 1.3E-106 T 28-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AL504_RS29920 1929d56b45ca9f758ff6b62dbcf15d02 316 Hamap MF_01962 Adenine deaminase. 4 316 82.384 T 28-03-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AL504_RS29920 1929d56b45ca9f758ff6b62dbcf15d02 316 SUPERFAMILY SSF51556 3 312 1.12E-85 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS28805 a8cf47ab393c07be9cf18989baab0276 271 SUPERFAMILY SSF52518 2 264 3.59E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL504_RS28805 a8cf47ab393c07be9cf18989baab0276 271 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 250 3.8E-42 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL504_RS28805 a8cf47ab393c07be9cf18989baab0276 271 Gene3D G3DSA:3.40.50.970 1 264 9.9E-68 T 28-03-2018 AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 SMART SM00347 34 134 3.5E-25 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 Gene3D G3DSA:1.10.10.10 1 162 1.6E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 SUPERFAMILY SSF46785 13 149 3.19E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS09275 c88755dd3a9db3c8df089b2304c16c9c 182 Pfam PF01047 MarR family 41 99 9.7E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 Pfam PF00107 Zinc-binding dehydrogenase 179 303 5.0E-23 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 139 6.3E-32 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 Gene3D G3DSA:3.90.180.10 1 162 1.0E-47 T 28-03-2018 AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 SMART SM00829 8 343 2.1E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 Gene3D G3DSA:3.40.50.10730 163 301 8.8E-26 T 28-03-2018 AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 SUPERFAMILY SSF51735 143 310 1.2E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 SUPERFAMILY SSF50129 4 177 6.76E-52 T 28-03-2018 IPR011032 GroES-like AL504_RS16390 5b443bcdfde3a5e16068677469f8f1e6 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL504_RS22070 d8ee56e750e06fe8fb57c72349adee3a 962 Gene3D G3DSA:2.10.270.10 84 330 0.02 T 28-03-2018 AL504_RS22070 d8ee56e750e06fe8fb57c72349adee3a 962 SUPERFAMILY SSF69360 91 171 1.96E-7 T 28-03-2018 AL504_RS22070 d8ee56e750e06fe8fb57c72349adee3a 962 Pfam PF14903 WG containing repeat 635 657 0.061 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22070 d8ee56e750e06fe8fb57c72349adee3a 962 Pfam PF14903 WG containing repeat 598 630 0.0068 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22070 d8ee56e750e06fe8fb57c72349adee3a 962 Pfam PF14903 WG containing repeat 92 126 1.6E-10 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22070 d8ee56e750e06fe8fb57c72349adee3a 962 Pfam PF14903 WG containing repeat 126 159 1.3E-10 T 28-03-2018 IPR032774 WG containing repeat AL504_RS23365 a9d5fe414168d9c487c230d09d0c2cde 188 Gene3D G3DSA:3.40.50.150 1 188 7.7E-32 T 28-03-2018 AL504_RS23365 a9d5fe414168d9c487c230d09d0c2cde 188 SUPERFAMILY SSF53335 5 180 1.51E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS23365 a9d5fe414168d9c487c230d09d0c2cde 188 PIRSF PIRSF004553 5 185 3.0E-39 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL504_RS23365 a9d5fe414168d9c487c230d09d0c2cde 188 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 123 129 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL504_RS23365 a9d5fe414168d9c487c230d09d0c2cde 188 Pfam PF03602 Conserved hypothetical protein 95 6 181 1.3E-45 T 28-03-2018 AL504_RS23365 a9d5fe414168d9c487c230d09d0c2cde 188 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 4 182 2.1E-38 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL504_RS24040 e2fb9aebd5fe26bc6ba9243762d089b4 319 Gene3D G3DSA:3.40.190.10 161 288 1.4E-8 T 28-03-2018 AL504_RS24040 e2fb9aebd5fe26bc6ba9243762d089b4 319 PIRSF PIRSF017082 2 317 5.2E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS24040 e2fb9aebd5fe26bc6ba9243762d089b4 319 SUPERFAMILY SSF53850 114 275 2.39E-13 T 28-03-2018 AL504_RS24040 e2fb9aebd5fe26bc6ba9243762d089b4 319 Gene3D G3DSA:3.40.190.10 18 160 0.089 T 28-03-2018 AL504_RS24040 e2fb9aebd5fe26bc6ba9243762d089b4 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 311 1.0E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS07840 230b7a7dfb72d8e69558b4e3c7996ce1 151 Pfam PF12802 MarR family 31 92 3.4E-12 T 28-03-2018 AL504_RS07840 230b7a7dfb72d8e69558b4e3c7996ce1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.6E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS07840 230b7a7dfb72d8e69558b4e3c7996ce1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.6E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS07840 230b7a7dfb72d8e69558b4e3c7996ce1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.6E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS07840 230b7a7dfb72d8e69558b4e3c7996ce1 151 Gene3D G3DSA:1.10.10.10 2 149 1.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS07840 230b7a7dfb72d8e69558b4e3c7996ce1 151 SMART SM00347 25 128 1.4E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS07840 230b7a7dfb72d8e69558b4e3c7996ce1 151 SUPERFAMILY SSF46785 8 143 5.56E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06630 80ef904f101e019d3debebc5ebc105c6 64 Pfam PF14070 Putative motility protein 14 62 1.1E-9 T 28-03-2018 IPR025906 Putative motility protein AL504_RS22910 8f629b131ca97364028cf4f098a85736 388 Pfam PF01757 Acyltransferase family 3 330 1.0E-12 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 Pfam PF00155 Aminotransferase class I and II 145 434 2.3E-24 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 SUPERFAMILY SSF46785 15 84 9.65E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.9E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 2.0E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 Gene3D G3DSA:3.90.1150.10 377 471 5.5E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 SUPERFAMILY SSF53383 92 470 4.59E-85 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 Gene3D G3DSA:1.10.10.10 4 84 8.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 SMART SM00345 23 82 6.3E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS13515 4237bef8ca2aee59ecb3df7e752a8380 471 Gene3D G3DSA:3.40.640.10 135 376 2.5E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS25320 8305d69870bbb7849377734c61d18326 322 SUPERFAMILY SSF53850 113 281 3.26E-8 T 28-03-2018 AL504_RS25320 8305d69870bbb7849377734c61d18326 322 PIRSF PIRSF017082 1 321 7.1E-66 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25320 8305d69870bbb7849377734c61d18326 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 316 2.8E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25320 8305d69870bbb7849377734c61d18326 322 Gene3D G3DSA:3.40.190.10 33 295 3.3E-4 T 28-03-2018 AL504_RS18080 5351bf04f95d7fb4f5cf01216b8aca9d 284 Pfam PF02167 Cytochrome C1 family 35 282 5.3E-19 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL504_RS18080 5351bf04f95d7fb4f5cf01216b8aca9d 284 Gene3D G3DSA:1.10.760.10 26 249 4.8E-56 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS18080 5351bf04f95d7fb4f5cf01216b8aca9d 284 Gene3D G3DSA:1.20.5.100 254 283 2.2E-9 T 28-03-2018 AL504_RS18080 5351bf04f95d7fb4f5cf01216b8aca9d 284 SUPERFAMILY SSF46626 225 248 1.45E-47 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS18080 5351bf04f95d7fb4f5cf01216b8aca9d 284 SUPERFAMILY SSF46626 20 168 1.45E-47 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS05905 9215c3f60954080a4a7ece30fdf83ded 388 Pfam PF13458 Periplasmic binding protein 29 367 2.0E-79 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS05905 9215c3f60954080a4a7ece30fdf83ded 388 Gene3D G3DSA:3.40.50.2300 30 157 1.3E-14 T 28-03-2018 AL504_RS05905 9215c3f60954080a4a7ece30fdf83ded 388 SUPERFAMILY SSF53822 29 372 3.1E-87 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS05905 9215c3f60954080a4a7ece30fdf83ded 388 Gene3D G3DSA:3.40.50.2300 158 328 4.9E-36 T 28-03-2018 AL504_RS02660 d11fe3a03f7907340d16bcbd96feddd4 268 Gene3D G3DSA:1.20.5.990 60 208 0.015 T 28-03-2018 AL504_RS15160 3ab35a01ebff94d3d26e89f13a1f739f 165 Gene3D G3DSA:3.40.630.30 1 154 4.0E-20 T 28-03-2018 AL504_RS15160 3ab35a01ebff94d3d26e89f13a1f739f 165 SUPERFAMILY SSF55729 3 139 2.06E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS15160 3ab35a01ebff94d3d26e89f13a1f739f 165 Pfam PF00583 Acetyltransferase (GNAT) family 25 135 7.6E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS01565 8d3c20146261e7e8596a2a2ae504adcc 551 Gene3D G3DSA:1.10.3720.10 3 270 3.1E-30 T 28-03-2018 AL504_RS01565 8d3c20146261e7e8596a2a2ae504adcc 551 Gene3D G3DSA:1.10.3720.10 292 550 5.4E-31 T 28-03-2018 AL504_RS01565 8d3c20146261e7e8596a2a2ae504adcc 551 SUPERFAMILY SSF161098 5 264 2.71E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01565 8d3c20146261e7e8596a2a2ae504adcc 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 367 543 1.1E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01565 8d3c20146261e7e8596a2a2ae504adcc 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 266 2.4E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS01565 8d3c20146261e7e8596a2a2ae504adcc 551 SUPERFAMILY SSF161098 289 547 5.7E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS07545 5dbfbd98b82923b9d48267228de922d5 344 Pfam PF03916 Polysulphide reductase, NrfD 12 290 4.1E-16 T 28-03-2018 IPR005614 NrfD family AL504_RS07545 5dbfbd98b82923b9d48267228de922d5 344 Gene3D G3DSA:1.20.1630.10 4 294 6.3E-42 T 28-03-2018 AL504_RS18115 d5984fa68a1b9c17e5b9bc899cc07597 101 SUPERFAMILY SSF47413 45 98 2.09E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS18115 d5984fa68a1b9c17e5b9bc899cc07597 101 Gene3D G3DSA:1.10.260.40 38 95 1.6E-8 T 28-03-2018 AL504_RS29860 7833e514e61f212dde4b642e7098cda8 278 SUPERFAMILY SSF51556 9 273 2.04E-72 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS29860 7833e514e61f212dde4b642e7098cda8 278 Pfam PF04909 Amidohydrolase 10 273 3.9E-35 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS29860 7833e514e61f212dde4b642e7098cda8 278 Gene3D G3DSA:3.20.20.140 2 276 1.7E-43 T 28-03-2018 AL504_RS26535 649b0dd71416331cef9c021a4823f4e2 74 Pfam PF04325 Protein of unknown function (DUF465) 19 66 2.4E-17 T 28-03-2018 IPR007420 Protein of unknown function DUF465 AL504_RS16575 6fdc7b6a518e71350bf90520eb445b34 212 Pfam PF03458 UPF0126 domain 98 170 8.6E-20 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AL504_RS16575 6fdc7b6a518e71350bf90520eb445b34 212 Pfam PF03458 UPF0126 domain 13 86 1.3E-17 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AL504_RS09355 7211e42a2229d9e1b1e33a49df4526eb 171 SUPERFAMILY SSF57561 52 167 1.31E-55 T 28-03-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 AL504_RS09355 7211e42a2229d9e1b1e33a49df4526eb 171 PIRSF PIRSF000192 2 168 2.5E-46 T 28-03-2018 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 AL504_RS09355 7211e42a2229d9e1b1e33a49df4526eb 171 Pfam PF02975 Methylamine dehydrogenase, L chain 56 165 3.2E-52 T 28-03-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 AL504_RS09355 7211e42a2229d9e1b1e33a49df4526eb 171 Gene3D G3DSA:2.60.30.10 48 167 1.3E-57 T 28-03-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 AL504_RS21010 01c864c9122769967f44e57067737e30 378 Pfam PF01098 Cell cycle protein 20 374 2.3E-101 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AL504_RS21010 01c864c9122769967f44e57067737e30 378 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 16 374 1.2E-128 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AL504_RS21010 01c864c9122769967f44e57067737e30 378 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 332 356 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AL504_RS05735 664feb1067f9fa40874279037e04f066 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 115 1.9E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL504_RS05735 664feb1067f9fa40874279037e04f066 229 Gene3D G3DSA:1.10.3720.10 3 226 8.5E-40 T 28-03-2018 AL504_RS05735 664feb1067f9fa40874279037e04f066 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 221 1.7E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05735 664feb1067f9fa40874279037e04f066 229 SUPERFAMILY SSF161098 11 204 3.92E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS15405 c2db1e9e480ecff5877c3b3c545eb37f 198 Gene3D G3DSA:1.20.120.330 22 193 9.1E-4 T 28-03-2018 AL504_RS19165 0da65e94e2e4b9f5a0e11debf71c5604 343 Gene3D G3DSA:3.40.190.10 23 139 2.7E-14 T 28-03-2018 AL504_RS19165 0da65e94e2e4b9f5a0e11debf71c5604 343 SUPERFAMILY SSF53850 25 338 1.25E-58 T 28-03-2018 AL504_RS19165 0da65e94e2e4b9f5a0e11debf71c5604 343 Pfam PF13343 Bacterial extracellular solute-binding protein 77 329 2.7E-32 T 28-03-2018 AL504_RS19165 0da65e94e2e4b9f5a0e11debf71c5604 343 Gene3D G3DSA:3.40.190.10 140 299 2.7E-36 T 28-03-2018 AL504_RS01940 828979ce1af3aba237dc3510bd9f92c3 363 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 16 344 6.1E-96 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AL504_RS01940 828979ce1af3aba237dc3510bd9f92c3 363 Pfam PF06996 Type VI secretion, TssG 16 343 4.8E-89 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AL504_RS26545 69bc186d937b2218464751dc5bf94121 242 Pfam PF10099 Anti-sigma-K factor rskA 64 235 6.3E-23 T 28-03-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AL504_RS28350 2986dd23c391fcab751816b33f271c1a 198 Gene3D G3DSA:3.50.70.10 13 178 1.7E-29 T 28-03-2018 IPR016088 Chalcone isomerase, 3-layer sandwich GO:0009813|GO:0045430 AL504_RS28350 2986dd23c391fcab751816b33f271c1a 198 SUPERFAMILY SSF54626 31 196 1.83E-20 T 28-03-2018 IPR016087 Chalcone isomerase GO:0016872 AL504_RS28350 2986dd23c391fcab751816b33f271c1a 198 Pfam PF16036 Chalcone isomerase-like 31 196 1.5E-48 T 28-03-2018 IPR016087 Chalcone isomerase GO:0016872 AL504_RS07260 28de2be4c38067f7b53b15534e5c9afd 630 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 216 624 2.7E-93 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS07260 28de2be4c38067f7b53b15534e5c9afd 630 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 49 176 3.7E-28 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS07260 28de2be4c38067f7b53b15534e5c9afd 630 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 225 626 9.2E-86 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS05645 fd09f8bebd3dec7ea9f585a7ca57e35d 489 SUPERFAMILY SSF56672 2 226 3.11E-30 T 28-03-2018 AL504_RS26390 662bb7de060d7511f77102e415db34e3 298 Gene3D G3DSA:2.60.120.330 61 236 1.7E-43 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AL504_RS26390 662bb7de060d7511f77102e415db34e3 298 SUPERFAMILY SSF51197 98 222 4.94E-19 T 28-03-2018 AL504_RS26390 662bb7de060d7511f77102e415db34e3 298 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 222 1.6E-45 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AL504_RS22965 633af8fc3bce536b2a2e8aa9a08ac6c2 412 Gene3D G3DSA:3.30.70.270 221 410 1.1E-46 T 28-03-2018 AL504_RS22965 633af8fc3bce536b2a2e8aa9a08ac6c2 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 336 1.3E-25 T 28-03-2018 IPR000160 GGDEF domain AL504_RS22965 633af8fc3bce536b2a2e8aa9a08ac6c2 412 SMART SM00267 213 403 2.6E-38 T 28-03-2018 IPR000160 GGDEF domain AL504_RS22965 633af8fc3bce536b2a2e8aa9a08ac6c2 412 SUPERFAMILY SSF55073 233 404 7.85E-38 T 28-03-2018 IPR029787 Nucleotide cyclase AL504_RS22965 633af8fc3bce536b2a2e8aa9a08ac6c2 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 228 334 3.9E-22 T 28-03-2018 IPR000160 GGDEF domain AL504_RS22965 633af8fc3bce536b2a2e8aa9a08ac6c2 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 356 399 1.8E-5 T 28-03-2018 IPR000160 GGDEF domain AL504_RS26110 cbf738e5c7104f96e393fbe35adf6f06 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 28 300 2.4E-40 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS26110 cbf738e5c7104f96e393fbe35adf6f06 350 Gene3D G3DSA:1.10.3470.10 7 305 7.5E-40 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS07765 550d130f48853614768e2bea1a1b018d 318 SUPERFAMILY SSF103481 52 155 4.71E-10 T 28-03-2018 AL504_RS07765 550d130f48853614768e2bea1a1b018d 318 SUPERFAMILY SSF103481 203 306 8.24E-13 T 28-03-2018 AL504_RS07765 550d130f48853614768e2bea1a1b018d 318 Pfam PF00892 EamA-like transporter family 23 151 1.8E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS07765 550d130f48853614768e2bea1a1b018d 318 Pfam PF00892 EamA-like transporter family 168 303 6.7E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 SUPERFAMILY SSF53850 97 299 1.81E-21 T 28-03-2018 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 Pfam PF03466 LysR substrate binding domain 94 298 8.5E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 Gene3D G3DSA:1.10.10.10 1 87 2.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 Gene3D G3DSA:3.40.190.10 183 265 5.3E-10 T 28-03-2018 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 Gene3D G3DSA:3.40.190.10 90 182 9.6E-9 T 28-03-2018 AL504_RS02135 b81e81c64ae40eba4501baf9b57e65b6 300 SUPERFAMILY SSF46785 6 91 9.25E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21690 6307eb2d950ced77c39271eda19aac27 329 Gene3D G3DSA:3.40.190.10 127 236 7.8E-10 T 28-03-2018 AL504_RS21690 6307eb2d950ced77c39271eda19aac27 329 SUPERFAMILY SSF53850 114 287 3.08E-13 T 28-03-2018 AL504_RS21690 6307eb2d950ced77c39271eda19aac27 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 324 8.1E-98 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS21690 6307eb2d950ced77c39271eda19aac27 329 PIRSF PIRSF017082 1 328 4.0E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS12270 4dd2df2c8968463eeee59e8c353ec952 169 Pfam PF03358 NADPH-dependent FMN reductase 43 126 5.3E-8 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL504_RS12270 4dd2df2c8968463eeee59e8c353ec952 169 SUPERFAMILY SSF52218 1 165 3.41E-28 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS12270 4dd2df2c8968463eeee59e8c353ec952 169 Gene3D G3DSA:3.40.50.360 1 169 7.9E-27 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS01485 7b09bd71ae676b1facccb443e8a4730a 171 SUPERFAMILY SSF55729 6 169 4.84E-36 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS01485 7b09bd71ae676b1facccb443e8a4730a 171 Gene3D G3DSA:3.40.630.30 6 171 1.0E-36 T 28-03-2018 AL504_RS01485 7b09bd71ae676b1facccb443e8a4730a 171 Pfam PF00583 Acetyltransferase (GNAT) family 51 147 1.6E-20 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS30970 8a2024d8f5e021160b4f8b2afef7016b 990 Pfam PF06791 Prophage tail length tape measure protein 129 332 1.9E-68 T 28-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal AL504_RS30970 8a2024d8f5e021160b4f8b2afef7016b 990 Gene3D G3DSA:1.20.1480.30 362 544 0.0092 T 28-03-2018 AL504_RS30970 8a2024d8f5e021160b4f8b2afef7016b 990 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 594 941 7.3E-46 T 28-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AL504_RS30970 8a2024d8f5e021160b4f8b2afef7016b 990 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 743 817 1.1E-24 T 28-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AL504_RS27680 6334a122e0809d046e5b8a6683134096 187 Pfam PF02659 Putative manganese efflux pump 31 181 1.7E-50 T 28-03-2018 IPR003810 Putative manganese efflux pump AL504_RS27680 6334a122e0809d046e5b8a6683134096 187 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 24.519 T 28-03-2018 IPR022929 Putative manganese efflux pump MntP AL504_RS27555 ee32b74ec549b3ce97a5b8452476a1dd 195 Pfam PF07336 Putative stress-induced transcription regulator 17 144 1.4E-15 T 28-03-2018 IPR010852 Putative stress-induced transcription regulator AL504_RS27555 ee32b74ec549b3ce97a5b8452476a1dd 195 SUPERFAMILY SSF160904 11 191 6.8E-43 T 28-03-2018 AL504_RS27555 ee32b74ec549b3ce97a5b8452476a1dd 195 Pfam PF11706 CGNR zinc finger 150 192 7.4E-18 T 28-03-2018 IPR021005 Zinc finger, CGNR AL504_RS27555 ee32b74ec549b3ce97a5b8452476a1dd 195 Gene3D G3DSA:1.10.3300.10 5 194 4.4E-45 T 28-03-2018 IPR023286 ABATE domain AL504_RS20315 cb36e20b5882375470ca8a20c82eba21 332 SUPERFAMILY SSF53448 17 275 1.02E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20315 cb36e20b5882375470ca8a20c82eba21 332 Gene3D G3DSA:3.90.550.10 2 261 5.2E-40 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20315 cb36e20b5882375470ca8a20c82eba21 332 Pfam PF00535 Glycosyl transferase family 2 20 188 2.5E-21 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS17650 6bf3dca7df25631d4586d8b42e5fbd20 273 SMART SM00382 38 227 7.4E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS17650 6bf3dca7df25631d4586d8b42e5fbd20 273 SUPERFAMILY SSF52540 8 243 3.73E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS17650 6bf3dca7df25631d4586d8b42e5fbd20 273 Pfam PF00005 ABC transporter 30 177 1.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS17650 6bf3dca7df25631d4586d8b42e5fbd20 273 Gene3D G3DSA:3.40.50.300 2 247 1.5E-61 T 28-03-2018 AL504_RS24535 33a631a0da3b6dd9974f567801748642 273 Gene3D G3DSA:3.60.21.10 1 260 2.2E-27 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS24535 33a631a0da3b6dd9974f567801748642 273 Pfam PF00149 Calcineurin-like phosphoesterase 3 233 2.3E-8 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS24535 33a631a0da3b6dd9974f567801748642 273 SUPERFAMILY SSF56300 1 121 5.17E-29 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS24535 33a631a0da3b6dd9974f567801748642 273 SUPERFAMILY SSF56300 168 256 5.17E-29 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS09885 4491e24ffb07a06abc0f5cf56e49f84b 382 Pfam PF13439 Glycosyltransferase Family 4 25 182 2.2E-13 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS09885 4491e24ffb07a06abc0f5cf56e49f84b 382 Pfam PF13692 Glycosyl transferases group 1 211 340 2.5E-18 T 28-03-2018 AL504_RS09885 4491e24ffb07a06abc0f5cf56e49f84b 382 Gene3D G3DSA:3.40.50.2000 183 361 1.8E-31 T 28-03-2018 AL504_RS09885 4491e24ffb07a06abc0f5cf56e49f84b 382 SUPERFAMILY SSF53756 13 376 1.99E-56 T 28-03-2018 AL504_RS17770 56164ea81547056715db02ed871f9924 73 Pfam PF12512 Protein of unknown function (DUF3717) 3 68 6.7E-26 T 28-03-2018 IPR022191 Protein of unknown function DUF3717 AL504_RS28395 d7c800f0c2c9f6e223cc9103e5a5a80e 533 SUPERFAMILY SSF75005 293 472 2.22E-10 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AL504_RS28395 d7c800f0c2c9f6e223cc9103e5a5a80e 533 Gene3D G3DSA:2.115.10.20 129 530 1.3E-10 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AL504_RS06080 abffde485721efb6f49834d52949fb52 245 Gene3D G3DSA:3.40.50.880 5 242 5.6E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS06080 abffde485721efb6f49834d52949fb52 245 SUPERFAMILY SSF52317 46 212 1.58E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS06080 abffde485721efb6f49834d52949fb52 245 Pfam PF00117 Glutamine amidotransferase class-I 41 197 1.0E-20 T 28-03-2018 IPR017926 Glutamine amidotransferase AL504_RS28370 6b21b7d0987051b72e3b291ad7fbb3c1 436 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 436 2.0E-110 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL504_RS28370 6b21b7d0987051b72e3b291ad7fbb3c1 436 Gene3D G3DSA:2.40.160.60 27 436 4.1E-90 T 28-03-2018 AL504_RS28370 6b21b7d0987051b72e3b291ad7fbb3c1 436 SUPERFAMILY SSF56935 27 436 3.48E-91 T 28-03-2018 AL504_RS01425 95dce8c7073c93eca2985e316b6523f5 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 316 2.2E-40 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS01425 95dce8c7073c93eca2985e316b6523f5 330 Gene3D G3DSA:1.10.3470.10 16 322 3.0E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS07320 2514d91a6cce424da085f836a7645598 403 Gene3D G3DSA:3.40.50.2300 23 156 2.4E-7 T 28-03-2018 AL504_RS07320 2514d91a6cce424da085f836a7645598 403 Pfam PF13458 Periplasmic binding protein 27 363 8.4E-94 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS07320 2514d91a6cce424da085f836a7645598 403 Gene3D G3DSA:3.40.50.2300 157 307 8.9E-32 T 28-03-2018 AL504_RS07320 2514d91a6cce424da085f836a7645598 403 SUPERFAMILY SSF53822 27 398 1.11E-92 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS06605 f880144b627662af3bfa569fc6f347b8 240 Pfam PF13489 Methyltransferase domain 31 192 1.7E-16 T 28-03-2018 AL504_RS06605 f880144b627662af3bfa569fc6f347b8 240 SUPERFAMILY SSF53335 27 220 1.82E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS06605 f880144b627662af3bfa569fc6f347b8 240 Gene3D G3DSA:3.40.50.150 23 218 2.3E-25 T 28-03-2018 AL504_RS07430 e596328e5a7ed3639a31a1fe7ed408a7 294 Pfam PF00378 Enoyl-CoA hydratase/isomerase 110 212 1.0E-14 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS07430 e596328e5a7ed3639a31a1fe7ed408a7 294 SUPERFAMILY SSF52096 25 266 1.75E-32 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS07430 e596328e5a7ed3639a31a1fe7ed408a7 294 Gene3D G3DSA:3.90.226.10 11 265 2.1E-33 T 28-03-2018 AL504_RS12735 b4b8f80eaa30de276c4c12f0ddd236e0 273 SUPERFAMILY SSF161098 68 250 1.57E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS12735 b4b8f80eaa30de276c4c12f0ddd236e0 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 270 1.3E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS12735 b4b8f80eaa30de276c4c12f0ddd236e0 273 Gene3D G3DSA:1.10.3720.10 5 271 2.1E-39 T 28-03-2018 AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 SUPERFAMILY SSF141868 267 518 1.01E-55 T 28-03-2018 IPR001633 EAL domain AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 Gene3D G3DSA:3.20.20.450 254 523 1.2E-63 T 28-03-2018 IPR001633 EAL domain AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 Gene3D G3DSA:1.10.10.10 134 249 1.3E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 SMART SM00052 261 509 2.8E-43 T 28-03-2018 IPR001633 EAL domain AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 Pfam PF00486 Transcriptional regulatory protein, C terminal 172 242 9.1E-5 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 Pfam PF00563 EAL domain 270 504 1.5E-51 T 28-03-2018 IPR001633 EAL domain AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 SUPERFAMILY SSF46894 161 243 8.79E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL504_RS21875 ce153b37ce221ca671ccaadf0a2f8f26 550 SMART SM00862 169 242 0.0055 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL504_RS17220 4141a623c53b32dbc5cc247f81bd1cce 215 Pfam PF01292 Prokaryotic cytochrome b561 12 189 4.5E-26 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL504_RS17220 4141a623c53b32dbc5cc247f81bd1cce 215 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 9 207 1.8E-59 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AL504_RS17220 4141a623c53b32dbc5cc247f81bd1cce 215 SUPERFAMILY SSF81342 6 211 3.45E-53 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL504_RS17220 4141a623c53b32dbc5cc247f81bd1cce 215 Gene3D G3DSA:1.20.950.20 4 215 1.4E-50 T 28-03-2018 AL504_RS07880 19bdcb9df6fdc65db5a38994e674e2a5 97 SUPERFAMILY SSF75169 4 95 5.06E-11 T 28-03-2018 IPR027396 DsrEFH-like AL504_RS07880 19bdcb9df6fdc65db5a38994e674e2a5 97 Gene3D G3DSA:3.40.1260.10 2 97 7.0E-9 T 28-03-2018 AL504_RS17870 3cef7719ab23058e15bbe95870417d28 194 Pfam PF02417 Chromate transporter 16 176 3.1E-27 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL504_RS08685 9f0658d2c0eb64d035662d2587538900 281 Pfam PF00482 Type II secretion system (T2SS), protein F 114 238 6.1E-17 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS19835 a6e36c818ae3d577f93464d44be6039a 151 Pfam PF03500 Cellulose synthase subunit D 22 127 2.6E-5 T 28-03-2018 IPR022798 Cellulose synthase subunit D, bacterial AL504_RS19835 a6e36c818ae3d577f93464d44be6039a 151 Gene3D G3DSA:3.30.1380.20 19 144 1.3E-4 T 28-03-2018 AL504_RS15150 9e8b0913655c8697c482c0535dfb1398 529 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 233 1.5E-20 T 28-03-2018 AL504_RS01690 ef0f0f83de46c3b8666d5f9fc19dcb8a 323 Gene3D G3DSA:3.40.190.10 128 295 5.6E-10 T 28-03-2018 AL504_RS01690 ef0f0f83de46c3b8666d5f9fc19dcb8a 323 SUPERFAMILY SSF53850 110 282 3.72E-9 T 28-03-2018 AL504_RS01690 ef0f0f83de46c3b8666d5f9fc19dcb8a 323 PIRSF PIRSF017082 1 323 1.4E-59 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS01690 ef0f0f83de46c3b8666d5f9fc19dcb8a 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 316 1.3E-51 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Pfam PF05650 Domain of unknown function (DUF802) 645 697 1.6E-11 T 28-03-2018 IPR008520 Domain of unknown function DUF802 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Pfam PF05650 Domain of unknown function (DUF802) 776 828 1.7E-12 T 28-03-2018 IPR008520 Domain of unknown function DUF802 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Pfam PF05650 Domain of unknown function (DUF802) 383 435 8.9E-15 T 28-03-2018 IPR008520 Domain of unknown function DUF802 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Pfam PF05650 Domain of unknown function (DUF802) 514 566 6.2E-16 T 28-03-2018 IPR008520 Domain of unknown function DUF802 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Pfam PF05650 Domain of unknown function (DUF802) 329 380 1.6E-18 T 28-03-2018 IPR008520 Domain of unknown function DUF802 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 729 775 0.05 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 858 961 4.5E-6 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 321 388 5.9E-18 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 776 857 1.2E-18 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 644 728 4.5E-19 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 598 643 0.025 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 389 466 3.5E-21 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 467 507 0.016 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.290 508 597 2.3E-21 T 28-03-2018 AL504_RS02010 1a0e5e1b4a43f691aeb2575dfebbc92f 1099 Gene3D G3DSA:1.20.120.20 53 320 0.37 T 28-03-2018 AL504_RS20410 e3d9d49b83cf12304df2561bc14acbb1 233 Pfam PF10997 Alternate to MurJ 133 225 1.3E-13 T 28-03-2018 IPR021260 Lipid II flippase Amj AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 SUPERFAMILY SSF51735 5 236 3.82E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 Gene3D G3DSA:3.40.50.720 4 239 8.0E-64 T 28-03-2018 AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 235 1.3E-45 T 28-03-2018 AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 5.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 5.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS07295 78ce26c94abbac36c19077cfa42578bb 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS08310 60d6a2ab18857069f5a350c9843e2cb7 227 SUPERFAMILY SSF55811 45 206 5.15E-23 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL504_RS08310 60d6a2ab18857069f5a350c9843e2cb7 227 Pfam PF00293 NUDIX domain 60 174 4.3E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL504_RS08310 60d6a2ab18857069f5a350c9843e2cb7 227 Gene3D G3DSA:3.90.79.10 37 215 6.6E-30 T 28-03-2018 AL504_RS01025 a7a3d81204b7cc931e587df53f74ab65 169 Gene3D G3DSA:3.30.240.20 93 161 8.6E-17 T 28-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AL504_RS01025 a7a3d81204b7cc931e587df53f74ab65 169 Pfam PF04239 Protein of unknown function (DUF421) 99 163 1.2E-13 T 28-03-2018 IPR007353 Protein of unknown function DUF421 AL504_RS12365 2c5bae09e08eec03d32f2318a95bf680 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 330 1.7E-21 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS12365 2c5bae09e08eec03d32f2318a95bf680 345 Gene3D G3DSA:1.10.3470.10 3 106 8.3E-5 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS12365 2c5bae09e08eec03d32f2318a95bf680 345 Gene3D G3DSA:1.10.3470.10 107 339 5.2E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS27540 1e7b15f69610179dd1e4dcaa85bc5338 135 Pfam PF01124 MAPEG family 16 131 4.5E-20 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AL504_RS27540 1e7b15f69610179dd1e4dcaa85bc5338 135 Gene3D G3DSA:1.20.120.550 1 135 6.6E-21 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AL504_RS27540 1e7b15f69610179dd1e4dcaa85bc5338 135 SUPERFAMILY SSF161084 4 127 1.28E-25 T 28-03-2018 AL504_RS02955 0169f1ed7a423d1b48a0c7b59e9589cf 340 SUPERFAMILY SSF53850 135 303 5.07E-10 T 28-03-2018 AL504_RS02955 0169f1ed7a423d1b48a0c7b59e9589cf 340 PIRSF PIRSF017082 5 338 1.3E-71 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02955 0169f1ed7a423d1b48a0c7b59e9589cf 340 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 63 334 3.4E-65 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02955 0169f1ed7a423d1b48a0c7b59e9589cf 340 Gene3D G3DSA:3.40.190.10 139 277 1.7E-10 T 28-03-2018 AL504_RS29435 e2329a8c840a545d4166455a0ae65649 131 Pfam PF13767 Domain of unknown function (DUF4168) 44 119 4.8E-18 T 28-03-2018 IPR025433 Domain of unknown function DUF4168 AL504_RS28295 c89b3baf52671cacd4f5ea29bb48bcc9 278 SUPERFAMILY SSF100950 10 258 1.02E-59 T 28-03-2018 AL504_RS28295 c89b3baf52671cacd4f5ea29bb48bcc9 278 SMART SM00882 11 231 9.5E-33 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS28295 c89b3baf52671cacd4f5ea29bb48bcc9 278 Pfam PF01144 Coenzyme A transferase 13 227 4.2E-21 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AL504_RS28295 c89b3baf52671cacd4f5ea29bb48bcc9 278 Gene3D G3DSA:3.40.1080.10 5 254 4.4E-44 T 28-03-2018 AL504_RS26555 ae49ab16187830daf6b989a274f5c353 187 Pfam PF11937 Protein of unknown function (DUF3455) 46 185 2.3E-28 T 28-03-2018 IPR021851 Protein of unknown function DUF3455 AL504_RS17735 c76617bb24859a791842b8ced0d3648e 199 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 31 138 1.3E-5 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AL504_RS26215 efde93bf4cc707f6e23a54d5c768fd10 129 Pfam PF13467 Ribbon-helix-helix domain 16 82 2.1E-26 T 28-03-2018 IPR027373 Ribbon-helix-helix domain AL504_RS26215 efde93bf4cc707f6e23a54d5c768fd10 129 Gene3D G3DSA:1.10.3990.20 11 95 1.2E-34 T 28-03-2018 AL504_RS00670 b1142827699ac005fff09678403ba344 334 Pfam PF13387 Domain of unknown function (DUF4105) 120 270 7.2E-39 T 28-03-2018 IPR025178 Domain of unknown function DUF4105 AL504_RS29295 c658dcfbb771766023e0f93dfe07d143 260 SUPERFAMILY SSF53639 25 236 2.94E-65 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS29295 c658dcfbb771766023e0f93dfe07d143 260 Gene3D G3DSA:3.40.225.10 26 255 3.5E-51 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS29295 c658dcfbb771766023e0f93dfe07d143 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 34 211 1.7E-38 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS29295 c658dcfbb771766023e0f93dfe07d143 260 SMART SM01007 33 211 5.8E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL504_RS02875 a9afeca78f85c9c34dd91ceb8cfead81 222 Gene3D G3DSA:3.40.50.150 6 222 1.8E-33 T 28-03-2018 AL504_RS02875 a9afeca78f85c9c34dd91ceb8cfead81 222 Pfam PF13649 Methyltransferase domain 46 138 1.2E-12 T 28-03-2018 AL504_RS02875 a9afeca78f85c9c34dd91ceb8cfead81 222 SUPERFAMILY SSF53335 10 221 2.29E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS18980 1ce9ff95dba68fa4daba1add96d7b304 152 Hamap MF_00598 Protein Smg [smg]. 1 152 26.689 T 28-03-2018 IPR007456 Smg AL504_RS18980 1ce9ff95dba68fa4daba1add96d7b304 152 Pfam PF04361 Protein of unknown function (DUF494) 1 152 1.2E-50 T 28-03-2018 IPR007456 Smg AL504_RS21295 136ead4d8ca5be20ec4c2939324fad0b 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.2E-24 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL504_RS21295 136ead4d8ca5be20ec4c2939324fad0b 105 SUPERFAMILY SSF103481 4 102 8.89E-20 T 28-03-2018 AL504_RS24175 95139bd4fe186af431293c7323e6fb09 713 Pfam PF01968 Hydantoinase/oxoprolinase 212 506 6.6E-77 T 28-03-2018 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403 AL504_RS24175 95139bd4fe186af431293c7323e6fb09 713 Gene3D G3DSA:3.30.420.150 271 552 1.4E-4 T 28-03-2018 AL504_RS24175 95139bd4fe186af431293c7323e6fb09 713 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 15 190 1.1E-51 T 28-03-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403 AL504_RS24175 95139bd4fe186af431293c7323e6fb09 713 Gene3D G3DSA:3.30.420.40 7 114 4.8E-5 T 28-03-2018 AL504_RS24175 95139bd4fe186af431293c7323e6fb09 713 SUPERFAMILY SSF53067 270 354 9.06E-6 T 28-03-2018 AL504_RS24175 95139bd4fe186af431293c7323e6fb09 713 SUPERFAMILY SSF53067 405 502 9.06E-6 T 28-03-2018 AL504_RS24175 95139bd4fe186af431293c7323e6fb09 713 SUPERFAMILY SSF53067 16 89 9.06E-6 T 28-03-2018 AL504_RS22775 355d32093f4a879ceea1d4748c954507 46 Pfam PF10617 Protein of unknown function (DUF2474) 9 46 2.5E-11 T 28-03-2018 IPR018895 Protein of unknown function DUF2474 AL504_RS25970 4532a78f2739d5b71d3ec00da8fb42b5 296 PIRSF PIRSF011468 7 296 1.7E-159 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS25970 4532a78f2739d5b71d3ec00da8fb42b5 296 Pfam PF06007 Phosphonate metabolism protein PhnJ 16 287 6.6E-147 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL504_RS21470 14528e442972e6dad2c85949324e2396 272 Gene3D G3DSA:3.40.190.10 100 249 7.0E-17 T 28-03-2018 AL504_RS21470 14528e442972e6dad2c85949324e2396 272 SUPERFAMILY SSF53850 22 245 8.42E-14 T 28-03-2018 AL504_RS21470 14528e442972e6dad2c85949324e2396 272 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 58 253 1.6E-22 T 28-03-2018 AL504_RS19070 a44c41d728f83b0a942aa1e109c8c316 203 Pfam PF13460 NAD(P)H-binding 7 190 5.6E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19070 a44c41d728f83b0a942aa1e109c8c316 203 SUPERFAMILY SSF51735 1 202 6.02E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19070 a44c41d728f83b0a942aa1e109c8c316 203 Gene3D G3DSA:3.40.50.720 1 203 1.9E-27 T 28-03-2018 AL504_RS29090 9c5e2d26baf9e3753ebf4c46124b8e6f 361 Pfam PF01699 Sodium/calcium exchanger protein 41 185 2.1E-16 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL504_RS29090 9c5e2d26baf9e3753ebf4c46124b8e6f 361 Pfam PF01699 Sodium/calcium exchanger protein 216 356 7.9E-7 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL504_RS29990 0847daa742b69fa4360e28e6cb16600c 170 SUPERFAMILY SSF46785 24 158 1.13E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29990 0847daa742b69fa4360e28e6cb16600c 170 Pfam PF13463 Winged helix DNA-binding domain 52 117 2.2E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL504_RS29990 0847daa742b69fa4360e28e6cb16600c 170 Gene3D G3DSA:1.10.10.10 22 168 2.6E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS29990 0847daa742b69fa4360e28e6cb16600c 170 PIRSF PIRSF036158 1 170 2.9E-70 T 28-03-2018 IPR014601 Transcriptional regulator with MarR-type HTH domain AL504_RS10205 eaa54dd172a523e6978378dc36002376 314 Pfam PF03547 Membrane transport protein 159 304 5.8E-17 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL504_RS10205 eaa54dd172a523e6978378dc36002376 314 Pfam PF03547 Membrane transport protein 4 135 6.5E-17 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL504_RS04045 8fcd19129fd05b0138ba25418930c639 150 Pfam PF11356 Type II secretion system protein C 72 134 5.6E-7 T 28-03-2018 IPR024961 Type II secretion system protein C, N-terminal AL504_RS06305 2234fcfac06d3462faea1f19bfac423f 265 Gene3D G3DSA:2.40.10.220 122 265 2.1E-12 T 28-03-2018 AL504_RS06305 2234fcfac06d3462faea1f19bfac423f 265 Gene3D G3DSA:2.30.110.10 11 121 4.7E-4 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL504_RS28935 4f656432c5371c045ad3ce1180cda79b 208 Gene3D G3DSA:3.40.50.880 11 207 1.7E-12 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS28935 4f656432c5371c045ad3ce1180cda79b 208 SUPERFAMILY SSF52317 37 202 1.1E-5 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL504_RS26280 2d53ec769c8dbd8407a4400e828ea241 403 Pfam PF07690 Major Facilitator Superfamily 22 345 1.1E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS26280 2d53ec769c8dbd8407a4400e828ea241 403 Gene3D G3DSA:1.20.1250.20 5 203 4.8E-26 T 28-03-2018 AL504_RS26280 2d53ec769c8dbd8407a4400e828ea241 403 SUPERFAMILY SSF103473 11 394 1.57E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS26280 2d53ec769c8dbd8407a4400e828ea241 403 Gene3D G3DSA:1.20.1250.20 204 402 1.1E-26 T 28-03-2018 AL504_RS09455 6be6a072c0c00d8d8549e6ca5f6f2365 134 SUPERFAMILY SSF81301 1 109 1.8E-34 T 28-03-2018 AL504_RS09455 6be6a072c0c00d8d8549e6ca5f6f2365 134 Gene3D G3DSA:3.30.460.10 1 119 1.1E-30 T 28-03-2018 AL504_RS09455 6be6a072c0c00d8d8549e6ca5f6f2365 134 Pfam PF02410 Ribosomal silencing factor during starvation 9 104 2.3E-24 T 28-03-2018 AL504_RS09455 6be6a072c0c00d8d8549e6ca5f6f2365 134 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.184 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL504_RS09455 6be6a072c0c00d8d8549e6ca5f6f2365 134 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 2.5E-32 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL504_RS20550 9cf498005c77fe9e50a48cb9fd05a68d 154 SUPERFAMILY SSF109635 20 113 1.44E-28 T 28-03-2018 AL504_RS20550 9cf498005c77fe9e50a48cb9fd05a68d 154 SUPERFAMILY SSF57716 114 152 1.85E-8 T 28-03-2018 AL504_RS20550 9cf498005c77fe9e50a48cb9fd05a68d 154 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 36 144 7.3E-43 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL504_RS20550 9cf498005c77fe9e50a48cb9fd05a68d 154 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 32 153 28.459 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL504_RS20550 9cf498005c77fe9e50a48cb9fd05a68d 154 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 117 141 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AL504_RS20550 9cf498005c77fe9e50a48cb9fd05a68d 154 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 112 146 7.6E-11 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL504_RS09775 58cfbefe47230e97a9911e7e8dd8a5ba 328 Pfam PF03837 RecT family 36 210 2.1E-34 T 28-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 AL504_RS09775 58cfbefe47230e97a9911e7e8dd8a5ba 328 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 51 206 3.6E-23 T 28-03-2018 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 AL504_RS16355 358aebf059eb4948ccca3ea35562fa23 275 SUPERFAMILY SSF47413 45 93 1.45E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS16355 358aebf059eb4948ccca3ea35562fa23 275 SMART SM00530 25 97 5.8E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS16355 358aebf059eb4948ccca3ea35562fa23 275 Pfam PF13560 Helix-turn-helix domain 21 100 1.2E-16 T 28-03-2018 AL504_RS16355 358aebf059eb4948ccca3ea35562fa23 275 Gene3D G3DSA:1.10.260.40 13 115 6.9E-15 T 28-03-2018 AL504_RS28655 8afe5dd4f208ea6f3069e20366fce027 686 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 2 44 1.3E-6 T 28-03-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AL504_RS24705 cae5f1ff47e862fedb09d93e43cf74f8 234 Pfam PF12146 Serine aminopeptidase, S33 49 198 3.4E-8 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL504_RS24705 cae5f1ff47e862fedb09d93e43cf74f8 234 Gene3D G3DSA:3.40.50.1820 4 229 1.9E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS24705 cae5f1ff47e862fedb09d93e43cf74f8 234 SUPERFAMILY SSF53474 5 227 1.57E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS19625 334a74b6e6bb2ea818667c642347cc31 174 SUPERFAMILY SSF160369 3 171 2.35E-53 T 28-03-2018 AL504_RS19625 334a74b6e6bb2ea818667c642347cc31 174 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 71 143 6.0E-4 T 28-03-2018 AL504_RS19625 334a74b6e6bb2ea818667c642347cc31 174 Pfam PF00466 Ribosomal protein L10 4 100 7.8E-22 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AL504_RS19625 334a74b6e6bb2ea818667c642347cc31 174 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.452 T 28-03-2018 IPR022973 Ribosomal protein L10 AL504_RS19625 334a74b6e6bb2ea818667c642347cc31 174 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL504_RS17195 dcaa4ca11eab5beb6cc877f26cc679d0 344 Gene3D G3DSA:3.90.550.10 2 296 8.4E-42 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS17195 dcaa4ca11eab5beb6cc877f26cc679d0 344 Pfam PF00535 Glycosyl transferase family 2 12 138 2.3E-24 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS17195 dcaa4ca11eab5beb6cc877f26cc679d0 344 SUPERFAMILY SSF53448 9 237 3.87E-44 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS28125 91a255ce9fcf6d4bd644a5ddb3083632 83 Pfam PF05751 FixH 17 47 8.9E-6 T 28-03-2018 IPR008620 Nitrogen fixation protein FixH AL504_RS26975 00e3dbb5c9f8f0f8f9b3b5edd33aec72 422 Pfam PF04966 Carbohydrate-selective porin, OprB family 60 422 5.4E-95 T 28-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 AL504_RS02370 f75070f96458cdd33b0015e99643d635 237 Gene3D G3DSA:3.20.20.70 9 235 1.5E-12 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS02370 f75070f96458cdd33b0015e99643d635 237 SUPERFAMILY SSF51366 58 219 1.22E-9 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL504_RS09600 2f12eb6abfb9b1d7a6bae365bf2547ab 172 Pfam PF08813 Phage tail tube protein, TTP 4 169 1.9E-67 T 28-03-2018 IPR014918 Phage tail tube protein 3 AL504_RS20620 80aa3ec2ba4c8d9af6d98016e0deff1a 475 Gene3D G3DSA:3.90.1300.10 4 472 1.1E-119 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS20620 80aa3ec2ba4c8d9af6d98016e0deff1a 475 Pfam PF01425 Amidase 30 451 1.7E-94 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS20620 80aa3ec2ba4c8d9af6d98016e0deff1a 475 ProSitePatterns PS00571 Amidases signature. 158 189 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL504_RS20620 80aa3ec2ba4c8d9af6d98016e0deff1a 475 SUPERFAMILY SSF75304 4 460 5.36E-115 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL504_RS23490 3f21a2d5f609292099984642085cf940 391 Pfam PF13458 Periplasmic binding protein 25 358 1.6E-75 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS23490 3f21a2d5f609292099984642085cf940 391 Gene3D G3DSA:3.40.50.2300 186 350 1.5E-25 T 28-03-2018 AL504_RS23490 3f21a2d5f609292099984642085cf940 391 Gene3D G3DSA:3.40.50.2300 8 185 3.6E-31 T 28-03-2018 AL504_RS23490 3f21a2d5f609292099984642085cf940 391 SUPERFAMILY SSF53822 25 375 1.71E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS24720 9b11635daae6ff4558188aa3578ef08f 383 Gene3D G3DSA:1.20.1250.20 184 368 3.4E-17 T 28-03-2018 AL504_RS24720 9b11635daae6ff4558188aa3578ef08f 383 SUPERFAMILY SSF103473 7 367 5.75E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS24720 9b11635daae6ff4558188aa3578ef08f 383 Pfam PF07690 Major Facilitator Superfamily 12 326 2.4E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS24720 9b11635daae6ff4558188aa3578ef08f 383 Gene3D G3DSA:1.20.1250.20 1 164 1.1E-13 T 28-03-2018 AL504_RS25300 f2adf73e78c012ad54d836e8becc64f1 122 PIRSF PIRSF029720 1 122 4.7E-51 T 28-03-2018 IPR014558 Uncharacterised conserved lipoprotein AL504_RS25300 f2adf73e78c012ad54d836e8becc64f1 122 Pfam PF03640 Secreted repeat of unknown function 25 65 2.5E-15 T 28-03-2018 IPR005297 Lipoprotein repeat AL504_RS25300 f2adf73e78c012ad54d836e8becc64f1 122 Pfam PF03640 Secreted repeat of unknown function 78 121 4.1E-21 T 28-03-2018 IPR005297 Lipoprotein repeat AL504_RS11375 346fbdf4b20470b9df70746b6163cae8 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 301 4.2E-138 T 28-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL504_RS11375 346fbdf4b20470b9df70746b6163cae8 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 290 1.9E-64 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS11375 346fbdf4b20470b9df70746b6163cae8 303 SUPERFAMILY SSF53686 4 300 2.62E-89 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS11375 346fbdf4b20470b9df70746b6163cae8 303 Gene3D G3DSA:3.40.50.1100 46 142 2.4E-35 T 28-03-2018 AL504_RS11375 346fbdf4b20470b9df70746b6163cae8 303 Gene3D G3DSA:3.40.50.1100 143 303 1.3E-47 T 28-03-2018 AL504_RS11375 346fbdf4b20470b9df70746b6163cae8 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 38 56 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AL504_RS11375 346fbdf4b20470b9df70746b6163cae8 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 301 5.1E-117 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL504_RS02820 bd71dc88da0f376b094a29ef03c543aa 576 SUPERFAMILY SSF143975 4 376 7.19E-125 T 28-03-2018 AL504_RS02820 bd71dc88da0f376b094a29ef03c543aa 576 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS02820 bd71dc88da0f376b094a29ef03c543aa 576 SUPERFAMILY SSF52016 378 563 1.8E-57 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL504_RS02820 bd71dc88da0f376b094a29ef03c543aa 576 Pfam PF00920 Dehydratase family 41 557 1.6E-178 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL504_RS08005 64138a9f6f70149942eadbcd336a36bb 307 PIRSF PIRSF028561 3 307 2.5E-103 T 28-03-2018 IPR014548 Predicted acyltransferase AL504_RS08005 64138a9f6f70149942eadbcd336a36bb 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 103 304 5.7E-9 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL504_RS28885 a05d76c1842428cfd028766871f4018c 289 Pfam PF09414 RNA ligase 47 230 7.4E-30 T 28-03-2018 IPR021122 RNA ligase domain, REL/Rln2 AL504_RS28885 a05d76c1842428cfd028766871f4018c 289 SUPERFAMILY SSF56091 15 244 1.94E-40 T 28-03-2018 AL504_RS04600 930aeae80f501a0aa6a8258bf48b4a3e 174 Pfam PF02592 Putative vitamin uptake transporter 33 75 1.1E-9 T 28-03-2018 IPR003744 Queuosine precursor transporter AL504_RS04600 930aeae80f501a0aa6a8258bf48b4a3e 174 Pfam PF02592 Putative vitamin uptake transporter 76 162 2.0E-20 T 28-03-2018 IPR003744 Queuosine precursor transporter AL504_RS04600 930aeae80f501a0aa6a8258bf48b4a3e 174 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 74 157 1.9E-15 T 28-03-2018 IPR003744 Queuosine precursor transporter AL504_RS20970 7a2c8db14ef640202e91b70fa9edef74 83 Gene3D G3DSA:3.40.1620.10 6 63 6.6E-5 T 28-03-2018 AL504_RS20480 f2d665068a49a5ded15a0f4a2e8e5b25 310 Pfam PF02470 MlaD protein 34 103 4.4E-11 T 28-03-2018 IPR003399 Mce/MlaD AL504_RS20480 f2d665068a49a5ded15a0f4a2e8e5b25 310 Gene3D G3DSA:1.20.120.20 127 282 3.6E-4 T 28-03-2018 AL504_RS12710 f617d98dca2f88a5e2e00c9ee0a776f3 378 Gene3D G3DSA:3.60.60.10 114 372 1.0E-25 T 28-03-2018 AL504_RS12710 f617d98dca2f88a5e2e00c9ee0a776f3 378 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 128 351 3.7E-13 T 28-03-2018 IPR005079 Peptidase C45 AL504_RS17355 2e9e26c18b0f3fc59f29d947bbf4673a 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 2.1E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS17355 2e9e26c18b0f3fc59f29d947bbf4673a 325 SUPERFAMILY SSF161098 94 306 4.25E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS17355 2e9e26c18b0f3fc59f29d947bbf4673a 325 Gene3D G3DSA:1.10.3720.10 4 312 5.6E-42 T 28-03-2018 AL504_RS24260 cb4053c6e35616bd688818cf14066c01 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 6.6E-22 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AL504_RS06235 b442c8ca42bc217aa00c8594a9aa17c7 162 Pfam PF02674 Colicin V production protein 4 142 1.1E-35 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AL504_RS15345 774a3a8bfaca3fb1711d4ed17c6b508e 168 Pfam PF07321 Type III secretion protein YscO 5 151 9.8E-33 T 28-03-2018 IPR009929 Type III secretion sytem,YscO AL504_RS28065 477d9b14276ff46d7a7c91e17d052a5b 186 SUPERFAMILY SSF51161 7 140 1.94E-33 T 28-03-2018 IPR011004 Trimeric LpxA-like AL504_RS28065 477d9b14276ff46d7a7c91e17d052a5b 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 4.2E-4 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS28065 477d9b14276ff46d7a7c91e17d052a5b 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 1.1E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL504_RS28065 477d9b14276ff46d7a7c91e17d052a5b 186 Gene3D G3DSA:2.160.10.10 9 180 5.5E-37 T 28-03-2018 AL504_RS12950 57ec57d8f7e0cc1c4f8649481a8288d2 261 Pfam PF13531 Bacterial extracellular solute-binding protein 33 258 3.7E-34 T 28-03-2018 AL504_RS12950 57ec57d8f7e0cc1c4f8649481a8288d2 261 Gene3D G3DSA:3.40.190.10 31 137 1.5E-14 T 28-03-2018 AL504_RS12950 57ec57d8f7e0cc1c4f8649481a8288d2 261 SUPERFAMILY SSF53850 29 258 7.5E-36 T 28-03-2018 AL504_RS12950 57ec57d8f7e0cc1c4f8649481a8288d2 261 Gene3D G3DSA:3.40.190.10 138 256 3.3E-12 T 28-03-2018 AL504_RS28920 261cbd13f2b04458db5ec400fab025a4 333 SUPERFAMILY SSF81345 3 324 4.97E-75 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS28920 261cbd13f2b04458db5ec400fab025a4 333 Gene3D G3DSA:1.10.3470.10 1 331 6.1E-71 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS28920 261cbd13f2b04458db5ec400fab025a4 333 Pfam PF01032 FecCD transport family 7 324 8.7E-89 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS20200 cc601821a882204e041d8e760aff8978 400 Pfam PF00155 Aminotransferase class I and II 49 387 3.0E-32 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS20200 cc601821a882204e041d8e760aff8978 400 SUPERFAMILY SSF53383 9 398 5.7E-104 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS20200 cc601821a882204e041d8e760aff8978 400 Gene3D G3DSA:3.40.640.10 60 275 9.2E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS20200 cc601821a882204e041d8e760aff8978 400 Gene3D G3DSA:3.90.1150.10 276 400 2.6E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS24950 306ed189fa733243a5187dac778087bd 289 Pfam PF00892 EamA-like transporter family 152 285 2.5E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS24950 306ed189fa733243a5187dac778087bd 289 Pfam PF00892 EamA-like transporter family 7 140 5.9E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS24950 306ed189fa733243a5187dac778087bd 289 SUPERFAMILY SSF103481 40 143 1.09E-13 T 28-03-2018 AL504_RS24950 306ed189fa733243a5187dac778087bd 289 SUPERFAMILY SSF103481 187 287 1.44E-13 T 28-03-2018 AL504_RS16450 056180446ce126719a4500e3919cae9b 292 Gene3D G3DSA:1.10.620.20 3 198 4.2E-26 T 28-03-2018 AL504_RS16450 056180446ce126719a4500e3919cae9b 292 SUPERFAMILY SSF47240 12 278 2.8E-44 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS19520 34d588b61194f1af285ffa545fc1007b 195 SUPERFAMILY SSF51182 11 190 7.23E-37 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS19520 34d588b61194f1af285ffa545fc1007b 195 Gene3D G3DSA:2.60.120.10 1 193 2.4E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS02600 f90f741781b5f9e36d87f27b402a4e8a 60 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 22 55 1.3E-8 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AL504_RS27840 802e10e6d833916a1a4358ecfce8421d 117 Pfam PF03992 Antibiotic biosynthesis monooxygenase 17 69 7.2E-5 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL504_RS27840 802e10e6d833916a1a4358ecfce8421d 117 Gene3D G3DSA:3.30.70.100 15 111 2.3E-9 T 28-03-2018 AL504_RS27840 802e10e6d833916a1a4358ecfce8421d 117 SUPERFAMILY SSF54909 11 109 5.37E-13 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS04205 09a9858e0a5223d6369f237508716ab4 324 Pfam PF13557 Putative MetA-pathway of phenol degradation 79 291 2.6E-42 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AL504_RS14910 05d480e0d43ab08fbdc545466c63349b 148 Gene3D G3DSA:1.20.5.730 69 139 0.16 T 28-03-2018 AL504_RS14910 05d480e0d43ab08fbdc545466c63349b 148 Gene3D G3DSA:1.20.5.730 1 68 3.1E-4 T 28-03-2018 AL504_RS21590 b1e3605283cb8ace85772df9567a40d5 365 Gene3D G3DSA:3.40.630.10 20 302 1.3E-16 T 28-03-2018 AL504_RS21590 b1e3605283cb8ace85772df9567a40d5 365 SUPERFAMILY SSF53187 188 313 4.35E-15 T 28-03-2018 AL504_RS21590 b1e3605283cb8ace85772df9567a40d5 365 SUPERFAMILY SSF53187 56 127 4.35E-15 T 28-03-2018 AL504_RS21590 b1e3605283cb8ace85772df9567a40d5 365 Pfam PF10994 Protein of unknown function (DUF2817) 8 347 3.0E-121 T 28-03-2018 IPR021259 Protein of unknown function DUF2817 AL504_RS20325 a04afa6f20efea788a1cf0126123d907 634 Gene3D G3DSA:3.40.50.2000 477 604 2.1E-6 T 28-03-2018 AL504_RS20325 a04afa6f20efea788a1cf0126123d907 634 SUPERFAMILY SSF53756 406 623 7.53E-10 T 28-03-2018 AL504_RS24620 065660ddfff3e8108c62ca74546cd2d9 133 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 33 106 9.3E-18 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AL504_RS24620 065660ddfff3e8108c62ca74546cd2d9 133 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 26 122 4.6E-34 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AL504_RS05535 99b80d656e824d04ab135ed94e70fe16 264 Pfam PF05742 Transport and Golgi organisation 2 1 238 2.3E-56 T 28-03-2018 IPR008551 Transport and Golgi organisation protein 2 AL504_RS25700 f923cd9c0ec98a8cc70727410132eb7d 105 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 105 3.4E-31 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AL504_RS05155 257a0ac8a978d5abed2643d97413b30f 250 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 250 3.1E-50 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 AL504_RS05155 257a0ac8a978d5abed2643d97413b30f 250 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 29 250 1.8E-49 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 AL504_RS02215 1b1fd359a62319b3a125ebe2453841e7 533 Gene3D G3DSA:3.40.50.1010 1 156 2.4E-30 T 28-03-2018 IPR029060 PIN domain-like AL504_RS02215 1b1fd359a62319b3a125ebe2453841e7 533 Pfam PF01936 NYN domain 9 152 7.6E-33 T 28-03-2018 IPR021139 NYN domain, limkain-b1-type AL504_RS20090 30e8b7fc969c0b718134b506b07c8423 63 Pfam PF13627 Prokaryotic lipoprotein-attachment site 17 35 4.6E-8 T 28-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site AL504_RS06460 286b31c18cfe3d767f7efa48bb57943d 235 SMART SM00858 111 173 1.2E-9 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS06460 286b31c18cfe3d767f7efa48bb57943d 235 Gene3D G3DSA:3.90.1210.10 112 174 8.6E-13 T 28-03-2018 AL504_RS06460 286b31c18cfe3d767f7efa48bb57943d 235 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 99 234 1.0E-37 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL504_RS06460 286b31c18cfe3d767f7efa48bb57943d 235 Pfam PF13144 Chaperone for flagella basal body P-ring formation 39 233 4.3E-47 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL504_RS15325 c402973de48b8ce8308385bc97841744 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 6.5E-26 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS15325 c402973de48b8ce8308385bc97841744 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.0E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS15325 c402973de48b8ce8308385bc97841744 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.0E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS15325 c402973de48b8ce8308385bc97841744 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.0E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS15325 c402973de48b8ce8308385bc97841744 88 PIRSF PIRSF004669 1 88 5.6E-27 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL504_RS15325 c402973de48b8ce8308385bc97841744 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 2.2E-35 T 28-03-2018 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 AL504_RS04200 81b9184af1beced276298e1f67d9c640 363 Gene3D G3DSA:2.40.160.50 81 362 3.2E-26 T 28-03-2018 AL504_RS04200 81b9184af1beced276298e1f67d9c640 363 Pfam PF01103 Surface antigen 189 333 3.6E-5 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL504_RS30935 0cc89e2cd228d7884e76b19d98adc161 412 PRINTS PR00127 Clp protease catalytic subunit P signature 195 214 1.9E-10 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS30935 0cc89e2cd228d7884e76b19d98adc161 412 PRINTS PR00127 Clp protease catalytic subunit P signature 119 136 1.9E-10 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS30935 0cc89e2cd228d7884e76b19d98adc161 412 PRINTS PR00127 Clp protease catalytic subunit P signature 88 108 1.9E-10 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL504_RS30935 0cc89e2cd228d7884e76b19d98adc161 412 Gene3D G3DSA:3.90.226.10 43 219 9.2E-28 T 28-03-2018 AL504_RS30935 0cc89e2cd228d7884e76b19d98adc161 412 SUPERFAMILY SSF52096 57 218 1.03E-43 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS30935 0cc89e2cd228d7884e76b19d98adc161 412 Pfam PF00574 Clp protease 71 216 2.1E-31 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL504_RS05780 a2aa1e0f1716f39634559553433083a6 391 Gene3D G3DSA:2.60.40.1090 224 391 2.2E-5 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AL504_RS05765 0b929a656ebf79c0c69ad45e9ab29c86 714 Pfam PF10011 Predicted membrane protein (DUF2254) 8 155 1.8E-7 T 28-03-2018 IPR018723 Protein of unknown function DUF2254, membrane AL504_RS01290 32707540b7819d4e7a1684566eb9bc8b 441 Gene3D G3DSA:3.20.20.140 70 352 6.6E-38 T 28-03-2018 AL504_RS01290 32707540b7819d4e7a1684566eb9bc8b 441 SUPERFAMILY SSF51338 6 59 9.0E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS01290 32707540b7819d4e7a1684566eb9bc8b 441 SUPERFAMILY SSF51338 352 426 9.0E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS01290 32707540b7819d4e7a1684566eb9bc8b 441 Pfam PF01979 Amidohydrolase family 56 151 7.1E-5 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS01290 32707540b7819d4e7a1684566eb9bc8b 441 Pfam PF01979 Amidohydrolase family 227 400 2.7E-16 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS01290 32707540b7819d4e7a1684566eb9bc8b 441 Gene3D G3DSA:2.30.40.10 3 69 2.8E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL504_RS01290 32707540b7819d4e7a1684566eb9bc8b 441 SUPERFAMILY SSF51556 59 353 1.45E-43 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS08470 77b2aa111a8146a577193d45eeda51ea 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 436 4.7E-93 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL504_RS08470 77b2aa111a8146a577193d45eeda51ea 524 Gene3D G3DSA:3.90.76.10 56 150 1.4E-31 T 28-03-2018 AL504_RS08470 77b2aa111a8146a577193d45eeda51ea 524 SUPERFAMILY SSF53850 29 523 2.9E-132 T 28-03-2018 AL504_RS08470 77b2aa111a8146a577193d45eeda51ea 524 PIRSF PIRSF002741 2 524 8.6E-150 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL504_RS08470 77b2aa111a8146a577193d45eeda51ea 524 Gene3D G3DSA:3.40.190.10 151 294 1.3E-45 T 28-03-2018 AL504_RS08470 77b2aa111a8146a577193d45eeda51ea 524 Gene3D G3DSA:3.10.105.10 295 492 1.4E-44 T 28-03-2018 AL504_RS25900 1843049f6b954beb3cbe0c755014a9a6 280 SMART SM00382 30 259 5.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS25900 1843049f6b954beb3cbe0c755014a9a6 280 SUPERFAMILY SSF52540 3 241 1.14E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS25900 1843049f6b954beb3cbe0c755014a9a6 280 Pfam PF00005 ABC transporter 21 181 2.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS25900 1843049f6b954beb3cbe0c755014a9a6 280 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 5 250 3.7E-84 T 28-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AL504_RS25900 1843049f6b954beb3cbe0c755014a9a6 280 Gene3D G3DSA:3.40.50.300 1 276 1.7E-55 T 28-03-2018 AL504_RS25900 1843049f6b954beb3cbe0c755014a9a6 280 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS28090 975197156eea270de97522d7d808bcc1 227 SUPERFAMILY SSF48452 85 193 6.0E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS28090 975197156eea270de97522d7d808bcc1 227 Gene3D G3DSA:1.25.40.10 111 164 1.1E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS28090 975197156eea270de97522d7d808bcc1 227 Gene3D G3DSA:1.25.40.10 165 216 2.1E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS28090 975197156eea270de97522d7d808bcc1 227 SMART SM00028 113 146 310.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS28090 975197156eea270de97522d7d808bcc1 227 SMART SM00028 147 180 4.2E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL504_RS12935 8692eddc02c0585201cc8f7901be666a 240 SUPERFAMILY SSF46458 13 120 4.8E-23 T 28-03-2018 IPR009050 Globin-like AL504_RS12935 8692eddc02c0585201cc8f7901be666a 240 Pfam PF09313 Domain of unknown function (DUF1971) 146 212 6.8E-17 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 AL504_RS12935 8692eddc02c0585201cc8f7901be666a 240 Gene3D G3DSA:1.10.490.10 2 129 1.2E-21 T 28-03-2018 AL504_RS12935 8692eddc02c0585201cc8f7901be666a 240 SUPERFAMILY SSF51197 137 224 1.51E-20 T 28-03-2018 AL504_RS12935 8692eddc02c0585201cc8f7901be666a 240 Gene3D G3DSA:2.60.120.10 137 230 6.2E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS02645 fadca8ce78712c3109339c5dca1f30e5 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 302 3.4E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL504_RS02645 fadca8ce78712c3109339c5dca1f30e5 388 Gene3D G3DSA:2.40.50.100 183 365 8.0E-5 T 28-03-2018 AL504_RS02645 fadca8ce78712c3109339c5dca1f30e5 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 383 1.8E-74 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL504_RS02645 fadca8ce78712c3109339c5dca1f30e5 388 Gene3D G3DSA:2.40.50.100 79 151 2.0E-16 T 28-03-2018 AL504_RS02645 fadca8ce78712c3109339c5dca1f30e5 388 SUPERFAMILY SSF111369 71 307 1.06E-49 T 28-03-2018 AL504_RS23910 24928e84ab88872b7311f16f7c77d95d 323 SUPERFAMILY SSF53850 108 278 7.11E-13 T 28-03-2018 AL504_RS23910 24928e84ab88872b7311f16f7c77d95d 323 Gene3D G3DSA:3.40.190.10 121 231 2.7E-13 T 28-03-2018 AL504_RS23910 24928e84ab88872b7311f16f7c77d95d 323 PIRSF PIRSF017082 1 320 7.5E-69 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS23910 24928e84ab88872b7311f16f7c77d95d 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 313 1.7E-64 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02150 f8b8709b8868ac5d7afa2201bb8a8845 127 SUPERFAMILY SSF46626 1 81 3.65E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS02150 f8b8709b8868ac5d7afa2201bb8a8845 127 Pfam PF00034 Cytochrome c 28 69 6.4E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS02150 f8b8709b8868ac5d7afa2201bb8a8845 127 Gene3D G3DSA:1.10.760.10 6 123 7.2E-8 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS16635 9e315be47e4c5d2c1d31a2c08c933665 299 Pfam PF03547 Membrane transport protein 37 151 2.1E-8 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL504_RS16635 9e315be47e4c5d2c1d31a2c08c933665 299 Pfam PF03547 Membrane transport protein 153 291 4.6E-12 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL504_RS19250 8d15f89e2054c97e8c7a6637b4029e2c 387 Pfam PF01070 FMN-dependent dehydrogenase 18 378 9.8E-134 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AL504_RS19250 8d15f89e2054c97e8c7a6637b4029e2c 387 Gene3D G3DSA:3.20.20.70 7 380 3.1E-103 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS19250 8d15f89e2054c97e8c7a6637b4029e2c 387 PIRSF PIRSF000138 1 382 3.3E-124 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AL504_RS19250 8d15f89e2054c97e8c7a6637b4029e2c 387 SUPERFAMILY SSF51395 8 373 4.4E-105 T 28-03-2018 AL504_RS19250 8d15f89e2054c97e8c7a6637b4029e2c 387 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 278 284 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AL504_RS24675 f6a875624664752a3e4263997ebc3dd2 442 Gene3D G3DSA:2.130.10.130 7 166 1.2E-4 T 28-03-2018 AL504_RS20490 9b726cc39f6b9a2ac2c926df8a47c409 217 Gene3D G3DSA:3.40.50.1820 1 214 7.2E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS20490 9b726cc39f6b9a2ac2c926df8a47c409 217 SUPERFAMILY SSF53474 2 212 3.81E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29350 1e46b9ee2db239fd011a812c0277acf4 237 SUPERFAMILY SSF74653 137 221 1.18E-7 T 28-03-2018 AL504_RS29350 1e46b9ee2db239fd011a812c0277acf4 237 SUPERFAMILY SSF74653 59 72 1.18E-7 T 28-03-2018 AL504_RS29350 1e46b9ee2db239fd011a812c0277acf4 237 Gene3D G3DSA:3.30.1150.10 138 229 2.8E-9 T 28-03-2018 AL504_RS29350 1e46b9ee2db239fd011a812c0277acf4 237 Pfam PF13103 TonB C terminal 150 212 2.2E-6 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 SUPERFAMILY SSF56235 5 367 1.23E-143 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 SUPERFAMILY SSF56235 404 590 1.23E-143 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 1.4E-26 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 143 1.4E-26 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 1.4E-26 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 35 60 1.4E-26 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 106 124 1.4E-26 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 1.4E-26 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS12610 df78c8fd504edb034d1b1d6dd1b2a894 599 Pfam PF01019 Gamma-glutamyltranspeptidase 28 590 4.4E-126 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS04670 4ed1db9591c13851bec0ceaa73641d40 343 Gene3D G3DSA:1.10.533.10 123 219 1.2E-4 T 28-03-2018 AL504_RS30030 08940faa32c64c90c4f3d39292535df1 141 Pfam PF04170 NlpE N-terminal domain 46 129 3.1E-26 T 28-03-2018 IPR007298 Copper resistance lipoprotein NlpE AL504_RS01460 749afd40e4f2455c974f8a4ddaa392e6 237 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 56 209 2.1E-37 T 28-03-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 AL504_RS28160 068f479053513c80c6bd62bb19043647 324 Pfam PF00122 E1-E2 ATPase 166 239 1.3E-9 T 28-03-2018 AL504_RS28160 068f479053513c80c6bd62bb19043647 324 Gene3D G3DSA:1.20.1110.10 32 243 9.3E-8 T 28-03-2018 AL504_RS10070 46a3cc2c4988ccd34e43042e09e0a182 176 SUPERFAMILY SSF69118 14 174 1.57E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS10070 46a3cc2c4988ccd34e43042e09e0a182 176 Gene3D G3DSA:1.20.1290.10 15 176 2.5E-39 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS10070 46a3cc2c4988ccd34e43042e09e0a182 176 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 103 2.3E-10 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS15625 720494b0ba9ea29e79338cd654d666c6 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 277 4.6E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS15625 720494b0ba9ea29e79338cd654d666c6 293 Gene3D G3DSA:1.10.3470.10 1 282 2.2E-50 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS11700 5b09d93711613711ca18a364f470d531 338 Gene3D G3DSA:3.40.50.1100 153 338 4.8E-28 T 28-03-2018 AL504_RS11700 5b09d93711613711ca18a364f470d531 338 PIRSF PIRSF006278 1 337 2.1E-125 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL504_RS11700 5b09d93711613711ca18a364f470d531 338 Gene3D G3DSA:3.40.50.1100 50 152 1.6E-34 T 28-03-2018 AL504_RS11700 5b09d93711613711ca18a364f470d531 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 321 4.4E-48 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS11700 5b09d93711613711ca18a364f470d531 338 SUPERFAMILY SSF53686 4 334 2.33E-102 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS11700 5b09d93711613711ca18a364f470d531 338 Hamap MF_00807 1-aminocyclopropane-1-carboxylate deaminase [acdS]. 2 338 71.027 T 28-03-2018 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 AL504_RS11700 5b09d93711613711ca18a364f470d531 338 TIGRFAM TIGR01274 ACC_deam: 1-aminocyclopropane-1-carboxylate deaminase 3 337 1.8E-185 T 28-03-2018 IPR005965 1-aminocyclopropane-1-carboxylate deaminase GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 Pfam PF03170 Bacterial cellulose synthase subunit 65 673 3.7E-213 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 182 203 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 92 113 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 517 536 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 713 733 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 304 325 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 386 407 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 224 247 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 469 488 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS19860 359bc24de030d2c04cb7e4c91e6d9b1f 776 PRINTS PR01440 Cellulose synthase subunit B signature 554 574 2.0E-44 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AL504_RS06005 2cd7e94de210bf1484dbc33e112159ee 156 Gene3D G3DSA:2.60.40.1120 39 140 1.5E-4 T 28-03-2018 AL504_RS21780 252cbfc788538c809b030355454cbbb6 300 Gene3D G3DSA:1.10.3470.10 2 288 3.0E-46 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS21780 252cbfc788538c809b030355454cbbb6 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 283 3.9E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS15430 9be8b8737968501c7d9115cf84612253 135 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 10 116 1.1E-21 T 28-03-2018 IPR012672 Type III secretion system YscX AL504_RS19455 9a5968588de2eeff7cbb8291d790418f 332 SUPERFAMILY SSF53850 101 236 4.05E-9 T 28-03-2018 AL504_RS19455 9a5968588de2eeff7cbb8291d790418f 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 114 323 1.7E-19 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS19455 9a5968588de2eeff7cbb8291d790418f 332 Gene3D G3DSA:3.40.190.10 127 257 4.7E-13 T 28-03-2018 AL504_RS19455 9a5968588de2eeff7cbb8291d790418f 332 PIRSF PIRSF017082 1 332 2.1E-73 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00385 d268077d192184ca2c097a2550ae326a 259 SMART SM00345 28 87 9.0E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS00385 d268077d192184ca2c097a2550ae326a 259 Gene3D G3DSA:1.10.10.10 10 89 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00385 d268077d192184ca2c097a2550ae326a 259 SUPERFAMILY SSF46785 20 91 2.28E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS00385 d268077d192184ca2c097a2550ae326a 259 Gene3D G3DSA:3.40.1410.10 126 247 5.2E-5 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS00385 d268077d192184ca2c097a2550ae326a 259 SUPERFAMILY SSF64288 75 241 3.77E-9 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL504_RS00385 d268077d192184ca2c097a2550ae326a 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 87 1.8E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL504_RS20055 448636b1270f889467c456bbc214a917 287 Pfam PF00892 EamA-like transporter family 3 129 1.6E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS20055 448636b1270f889467c456bbc214a917 287 Pfam PF00892 EamA-like transporter family 141 277 3.7E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS20055 448636b1270f889467c456bbc214a917 287 SUPERFAMILY SSF103481 33 133 1.02E-14 T 28-03-2018 AL504_RS20055 448636b1270f889467c456bbc214a917 287 SUPERFAMILY SSF103481 175 282 4.84E-12 T 28-03-2018 AL504_RS25035 9aadda5932bec439bd9db16ca3bd211d 163 Pfam PF04314 Copper chaperone PCu(A)C 34 136 7.0E-36 T 28-03-2018 IPR007410 Copper chaperone PCuAC AL504_RS25035 9aadda5932bec439bd9db16ca3bd211d 163 SUPERFAMILY SSF110087 11 147 4.45E-43 T 28-03-2018 IPR007410 Copper chaperone PCuAC AL504_RS23695 30b6545bbd6d013e8d8171043eb90bc3 206 Gene3D G3DSA:1.10.357.10 1 197 4.2E-22 T 28-03-2018 AL504_RS23695 30b6545bbd6d013e8d8171043eb90bc3 206 SUPERFAMILY SSF46689 10 71 3.29E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL504_RS23695 30b6545bbd6d013e8d8171043eb90bc3 206 SUPERFAMILY SSF48498 85 199 2.33E-7 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL504_RS01160 6d1a89458b0f8b0b2d1ba5a245f27add 186 Pfam PF03358 NADPH-dependent FMN reductase 6 145 1.0E-33 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL504_RS01160 6d1a89458b0f8b0b2d1ba5a245f27add 186 SUPERFAMILY SSF52218 6 156 3.88E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS01160 6d1a89458b0f8b0b2d1ba5a245f27add 186 Gene3D G3DSA:3.40.50.360 6 186 1.1E-34 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS00630 9482929ebed33e0d1c2921d90f61b4f0 558 Pfam PF08479 POTRA domain, ShlB-type 70 145 1.4E-17 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AL504_RS00630 9482929ebed33e0d1c2921d90f61b4f0 558 Gene3D G3DSA:2.40.160.50 175 558 2.2E-49 T 28-03-2018 AL504_RS00630 9482929ebed33e0d1c2921d90f61b4f0 558 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 208 519 1.2E-28 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AL504_RS00630 9482929ebed33e0d1c2921d90f61b4f0 558 Gene3D G3DSA:3.10.20.310 73 145 9.0E-14 T 28-03-2018 AL504_RS21115 4981c10b502519c5bd8267551c6a5914 111 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.0E-30 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL504_RS21115 4981c10b502519c5bd8267551c6a5914 111 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 6.9E-25 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL504_RS21115 4981c10b502519c5bd8267551c6a5914 111 Gene3D G3DSA:3.30.160.100 1 96 4.4E-29 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL504_RS21115 4981c10b502519c5bd8267551c6a5914 111 SUPERFAMILY SSF69754 2 101 5.49E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL504_RS19140 73c839496891c228bf491c3f2abeff94 102 SUPERFAMILY SSF54292 17 94 1.57E-17 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL504_RS19140 73c839496891c228bf491c3f2abeff94 102 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 15 94 2.1E-25 T 28-03-2018 AL504_RS19140 73c839496891c228bf491c3f2abeff94 102 Gene3D G3DSA:3.10.20.30 14 91 4.0E-7 T 28-03-2018 IPR012675 Beta-grasp domain AL504_RS05275 4a663c989f6604a190a10c8fcd3049ae 93 PIRSF PIRSF028784 1 93 9.6E-30 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AL504_RS05275 4a663c989f6604a190a10c8fcd3049ae 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 1.8E-20 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AL504_RS03855 ad1f69835db85df9c1664aea7b288f12 106 Pfam PF00355 Rieske [2Fe-2S] domain 3 90 4.7E-17 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03855 ad1f69835db85df9c1664aea7b288f12 106 SUPERFAMILY SSF50022 1 103 1.83E-28 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS03855 ad1f69835db85df9c1664aea7b288f12 106 Gene3D G3DSA:2.102.10.10 1 106 1.0E-23 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS04070 18222f431a2f86133b63605e0c74ff07 207 Gene3D G3DSA:3.40.1620.10 5 87 0.0013 T 28-03-2018 AL504_RS27040 8bfa20ec03f7ac2e4aca089fd2204809 416 Gene3D G3DSA:3.50.50.60 2 416 7.7E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27040 8bfa20ec03f7ac2e4aca089fd2204809 416 SUPERFAMILY SSF51905 108 270 6.09E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27040 8bfa20ec03f7ac2e4aca089fd2204809 416 SUPERFAMILY SSF51905 4 55 6.09E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27040 8bfa20ec03f7ac2e4aca089fd2204809 416 SUPERFAMILY SSF51905 358 415 6.09E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS27040 8bfa20ec03f7ac2e4aca089fd2204809 416 Pfam PF01266 FAD dependent oxidoreductase 5 396 5.0E-50 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS05480 39e2b63ec51ee4d8703be03dfb3b939e 179 Gene3D G3DSA:1.10.3210.10 1 174 1.9E-43 T 28-03-2018 AL504_RS05480 39e2b63ec51ee4d8703be03dfb3b939e 179 TIGRFAM TIGR00277 HDIG: HDIG domain 8 99 1.4E-8 T 28-03-2018 IPR006675 HDIG domain AL504_RS05480 39e2b63ec51ee4d8703be03dfb3b939e 179 SUPERFAMILY SSF109604 4 171 2.17E-33 T 28-03-2018 AL504_RS05480 39e2b63ec51ee4d8703be03dfb3b939e 179 SMART SM00471 4 141 2.0E-8 T 28-03-2018 IPR003607 HD/PDEase domain AL504_RS05480 39e2b63ec51ee4d8703be03dfb3b939e 179 Pfam PF01966 HD domain 10 131 2.3E-21 T 28-03-2018 IPR006674 HD domain AL504_RS11015 f8fbc44fb32e078b4e13035eb4270d99 277 Gene3D G3DSA:1.20.1640.10 4 255 0.0055 T 28-03-2018 AL504_RS11015 f8fbc44fb32e078b4e13035eb4270d99 277 Pfam PF02535 ZIP Zinc transporter 91 250 2.3E-23 T 28-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AL504_RS02855 50769f5306338172318239214d122a77 328 PIRSF PIRSF017082 1 328 1.8E-86 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02855 50769f5306338172318239214d122a77 328 Gene3D G3DSA:3.40.190.10 157 299 3.2E-12 T 28-03-2018 AL504_RS02855 50769f5306338172318239214d122a77 328 SUPERFAMILY SSF53850 114 289 3.08E-15 T 28-03-2018 AL504_RS02855 50769f5306338172318239214d122a77 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 325 2.0E-96 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS28685 e534c8d254e5a913454c4238c5759a02 400 Pfam PF11062 Protein of unknown function (DUF2863) 5 399 4.2E-171 T 28-03-2018 IPR021292 Protein of unknown function DUF2863 AL504_RS04055 858279ef6fda830c06bc9ee8a6466582 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 41 1.9E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04055 858279ef6fda830c06bc9ee8a6466582 136 SUPERFAMILY SSF54523 52 131 3.26E-8 T 28-03-2018 AL504_RS04055 858279ef6fda830c06bc9ee8a6466582 136 Gene3D G3DSA:3.30.1300.30 46 136 1.5E-11 T 28-03-2018 AL504_RS04055 858279ef6fda830c06bc9ee8a6466582 136 Pfam PF02501 Type II secretion system (T2SS), protein I 54 131 2.0E-9 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AL504_RS04055 858279ef6fda830c06bc9ee8a6466582 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 41 6.8E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04055 858279ef6fda830c06bc9ee8a6466582 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL504_RS04055 858279ef6fda830c06bc9ee8a6466582 136 TIGRFAM TIGR01707 gspI: type II secretion system protein I 20 114 6.4E-19 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AL504_RS22915 068a6a7b6edc811fa7980b56c59d0c88 176 Pfam PF03724 META domain 46 167 3.2E-23 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL504_RS05925 46bd5dbcc9c1b364343c6e2a717fc329 391 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 19 377 3.2E-110 T 28-03-2018 IPR010640 Low temperature requirement A AL504_RS03835 d6164bf366bf696706fb641fee643413 326 SUPERFAMILY SSF53850 120 288 1.39E-12 T 28-03-2018 AL504_RS03835 d6164bf366bf696706fb641fee643413 326 Gene3D G3DSA:3.40.190.10 126 281 1.5E-9 T 28-03-2018 AL504_RS03835 d6164bf366bf696706fb641fee643413 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 3.2E-81 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS03835 d6164bf366bf696706fb641fee643413 326 PIRSF PIRSF017082 1 326 3.1E-80 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS09870 77c6e0f20f4b9b2943bbc5ef7714f226 323 Gene3D G3DSA:3.40.50.2000 3 144 1.9E-14 T 28-03-2018 AL504_RS09870 77c6e0f20f4b9b2943bbc5ef7714f226 323 SUPERFAMILY SSF53756 9 320 1.35E-44 T 28-03-2018 AL504_RS09870 77c6e0f20f4b9b2943bbc5ef7714f226 323 Gene3D G3DSA:3.40.50.2000 162 317 1.4E-26 T 28-03-2018 AL504_RS09870 77c6e0f20f4b9b2943bbc5ef7714f226 323 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 72 310 3.9E-49 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL504_RS29540 0e7b1176fc35ae87fc5aafb7807766f6 170 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 5.6E-63 T 28-03-2018 IPR018531 Domain of unknown function DUF1993 AL504_RS29540 0e7b1176fc35ae87fc5aafb7807766f6 170 SUPERFAMILY SSF109854 4 168 1.56E-61 T 28-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AL504_RS29540 0e7b1176fc35ae87fc5aafb7807766f6 170 Gene3D G3DSA:1.20.120.450 2 169 3.7E-68 T 28-03-2018 AL504_RS02395 122368aaac606cb1f672a89ec080b729 436 Pfam PF12779 YXWGXW repeat (2 copies) 110 130 0.099 T 28-03-2018 IPR024447 YXWGXW repeat AL504_RS02395 122368aaac606cb1f672a89ec080b729 436 Pfam PF12779 YXWGXW repeat (2 copies) 77 102 0.011 T 28-03-2018 IPR024447 YXWGXW repeat AL504_RS03040 ee0c4d9c42d5f2a280f76bf3e47690f2 379 Gene3D G3DSA:2.130.10.10 188 353 2.5E-12 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS03040 ee0c4d9c42d5f2a280f76bf3e47690f2 379 SUPERFAMILY SSF50969 62 327 4.16E-26 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL504_RS03040 ee0c4d9c42d5f2a280f76bf3e47690f2 379 Gene3D G3DSA:2.130.10.10 43 187 1.7E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS12995 73975dc2c99ab532ba36f2a2c8c3eebd 271 Gene3D G3DSA:3.20.10.10 122 262 8.6E-24 T 28-03-2018 AL504_RS12995 73975dc2c99ab532ba36f2a2c8c3eebd 271 Pfam PF01063 Amino-transferase class IV 32 243 1.4E-29 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS12995 73975dc2c99ab532ba36f2a2c8c3eebd 271 Gene3D G3DSA:3.30.470.10 12 108 2.9E-12 T 28-03-2018 AL504_RS12995 73975dc2c99ab532ba36f2a2c8c3eebd 271 SUPERFAMILY SSF56752 25 250 6.02E-34 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL504_RS24670 104c99476f2d8eb30e8f5e38fce82e79 195 Gene3D G3DSA:3.40.50.620 35 172 7.0E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL504_RS24670 104c99476f2d8eb30e8f5e38fce82e79 195 Pfam PF02698 DUF218 domain 43 183 6.0E-24 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AL504_RS24740 cc3ec8147bd16281d3dfc3f5b6cb43be 148 Gene3D G3DSA:3.10.450.160 27 148 4.6E-24 T 28-03-2018 AL504_RS23725 c118055ab8906702b3fa7c3cdde18e27 333 Pfam PF01497 Periplasmic binding protein 69 308 3.1E-32 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL504_RS23725 c118055ab8906702b3fa7c3cdde18e27 333 SUPERFAMILY SSF53807 48 314 1.53E-61 T 28-03-2018 AL504_RS23725 c118055ab8906702b3fa7c3cdde18e27 333 Gene3D G3DSA:3.40.50.1980 174 330 1.0E-29 T 28-03-2018 AL504_RS23725 c118055ab8906702b3fa7c3cdde18e27 333 Gene3D G3DSA:3.40.50.1980 49 173 3.1E-24 T 28-03-2018 AL504_RS28770 a7df651eaa9377761d959046bd33d5fa 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 275 2.1E-39 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS28770 a7df651eaa9377761d959046bd33d5fa 288 Gene3D G3DSA:1.10.3470.10 1 279 6.2E-41 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS31350 463ccdc126c9a4dbae8a5910a520d53d 463 Gene3D G3DSA:1.25.40.10 17 255 6.7E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS30170 1a61b42461e27525fbaceaf21197c816 545 SUPERFAMILY SSF89550 53 158 1.04E-15 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL504_RS30170 1a61b42461e27525fbaceaf21197c816 545 SUPERFAMILY SSF89550 296 362 1.04E-15 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL504_RS30170 1a61b42461e27525fbaceaf21197c816 545 SUPERFAMILY SSF89550 199 261 1.04E-15 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL504_RS30170 1a61b42461e27525fbaceaf21197c816 545 Gene3D G3DSA:3.20.20.140 45 330 2.0E-10 T 28-03-2018 AL504_RS15525 7248c73da2160d84d8fcf32c10950958 397 Pfam PF11340 Protein of unknown function (DUF3142) 81 304 3.2E-84 T 28-03-2018 IPR021488 Protein of unknown function DUF3142 AL504_RS15480 35ca8de2a147efc955f2d739721e6cb8 425 SUPERFAMILY SSF82171 191 420 6.87E-13 T 28-03-2018 AL504_RS15480 35ca8de2a147efc955f2d739721e6cb8 425 Gene3D G3DSA:2.140.10.30 19 421 2.7E-11 T 28-03-2018 AL504_RS23785 cb70018670ae955580efa7c8bce48281 223 Pfam PF10099 Anti-sigma-K factor rskA 62 218 5.3E-25 T 28-03-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AL504_RS24060 f91c853e6e64e7e3c4c6c07dec0df1e9 114 SUPERFAMILY SSF69118 7 111 1.57E-25 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS24060 f91c853e6e64e7e3c4c6c07dec0df1e9 114 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 107 1.7E-19 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS24060 f91c853e6e64e7e3c4c6c07dec0df1e9 114 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 91 1.2E-15 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS24060 f91c853e6e64e7e3c4c6c07dec0df1e9 114 Gene3D G3DSA:1.20.1290.10 1 114 9.1E-22 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS27895 b35f9f0487469d37d0a0321113ec5bc7 181 SUPERFAMILY SSF54909 6 107 1.03E-18 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS27895 b35f9f0487469d37d0a0321113ec5bc7 181 Gene3D G3DSA:3.30.70.100 8 102 1.4E-14 T 28-03-2018 AL504_RS12190 01029c37b2c93a231b1ccff86cc3e24c 236 Gene3D G3DSA:3.30.950.10 121 232 2.2E-25 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS12190 01029c37b2c93a231b1ccff86cc3e24c 236 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 214 3.8E-9 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS12190 01029c37b2c93a231b1ccff86cc3e24c 236 SUPERFAMILY SSF53790 3 232 1.44E-63 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS12190 01029c37b2c93a231b1ccff86cc3e24c 236 Gene3D G3DSA:3.40.1010.10 2 120 3.4E-29 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL504_RS12190 01029c37b2c93a231b1ccff86cc3e24c 236 PIRSF PIRSF005917 1 232 1.1E-45 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL504_RS17395 03e0a6e7ad35addbaf92e9ad8b356385 245 Pfam PF01925 Sulfite exporter TauE/SafE 15 234 2.0E-15 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS03315 8d0490bea149dfecefb90c15ac5454a1 617 Pfam PF04183 IucA / IucC family 149 399 2.2E-74 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AL504_RS03315 8d0490bea149dfecefb90c15ac5454a1 617 Pfam PF06276 Ferric iron reductase FhuF-like transporter 421 576 9.9E-39 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain AL504_RS16005 90bad24d4582e1383d04742e049b8cce 141 Pfam PF13279 Thioesterase-like superfamily 11 132 2.2E-7 T 28-03-2018 AL504_RS16005 90bad24d4582e1383d04742e049b8cce 141 Gene3D G3DSA:3.10.129.10 1 141 1.0E-27 T 28-03-2018 AL504_RS16005 90bad24d4582e1383d04742e049b8cce 141 SUPERFAMILY SSF54637 2 137 3.74E-38 T 28-03-2018 IPR029069 HotDog domain AL504_RS10510 e0f5eec196f841ad514dd71f62789c86 479 SUPERFAMILY SSF52467 306 479 2.91E-75 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS10510 e0f5eec196f841ad514dd71f62789c86 479 Gene3D G3DSA:3.40.50.1220 305 479 4.3E-83 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS10510 e0f5eec196f841ad514dd71f62789c86 479 PIRSF PIRSF000204 2 479 2.5E-211 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AL504_RS10510 e0f5eec196f841ad514dd71f62789c86 479 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 476 2.9E-190 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL504_RS26865 f7a64197793a04c75997c737dd90659e 152 Pfam PF00216 Bacterial DNA-binding protein 55 151 5.6E-16 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS26865 f7a64197793a04c75997c737dd90659e 152 SUPERFAMILY SSF47729 55 151 1.02E-13 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS26865 f7a64197793a04c75997c737dd90659e 152 Gene3D G3DSA:4.10.520.10 49 152 3.0E-16 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL504_RS26865 f7a64197793a04c75997c737dd90659e 152 SMART SM00411 55 152 8.9E-16 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL504_RS22225 f5f8307cfc46e624432ff03fdf7ac7a6 319 Gene3D G3DSA:3.40.50.2300 13 139 1.3E-18 T 28-03-2018 AL504_RS22225 f5f8307cfc46e624432ff03fdf7ac7a6 319 Pfam PF13407 Periplasmic binding protein domain 30 287 2.8E-24 T 28-03-2018 IPR025997 Periplasmic binding protein AL504_RS22225 f5f8307cfc46e624432ff03fdf7ac7a6 319 Gene3D G3DSA:3.40.50.2300 140 298 1.1E-13 T 28-03-2018 AL504_RS22225 f5f8307cfc46e624432ff03fdf7ac7a6 319 SUPERFAMILY SSF53822 29 315 5.1E-38 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS04470 af66f7cdb5f6bb25d5062bdf04e2c3ae 188 Pfam PF11745 Protein of unknown function (DUF3304) 48 147 1.0E-13 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AL504_RS22535 5cfc3b74f8fffb0221e7684d4835bd7c 304 Gene3D G3DSA:3.20.20.70 1 299 2.9E-90 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS22535 5cfc3b74f8fffb0221e7684d4835bd7c 304 Pfam PF05853 beta-keto acid cleavage enzyme 5 292 1.0E-88 T 28-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 AL504_RS19760 c0632230fd867830e5511969f3455ac6 464 Pfam PF04932 O-Antigen ligase 210 365 9.1E-14 T 28-03-2018 IPR007016 O-antigen ligase-related AL504_RS10225 edeee2a04beb0d98d762c4b8056a402c 110 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 109 2.0E-22 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AL504_RS22305 56cae6568e73557db5a39b68b8cd9b3e 399 Pfam PF07690 Major Facilitator Superfamily 19 350 9.3E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL504_RS22305 56cae6568e73557db5a39b68b8cd9b3e 399 Gene3D G3DSA:1.20.1250.20 12 196 8.6E-25 T 28-03-2018 AL504_RS22305 56cae6568e73557db5a39b68b8cd9b3e 399 SUPERFAMILY SSF103473 10 390 9.68E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL504_RS22305 56cae6568e73557db5a39b68b8cd9b3e 399 Gene3D G3DSA:1.20.1250.20 197 395 3.1E-14 T 28-03-2018 AL504_RS06425 6138cc3b60127c4fc061dd341232092c 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 6 228 26.515 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL504_RS06425 6138cc3b60127c4fc061dd341232092c 230 PRINTS PR01008 Flagellar L-ring protein signature 191 205 6.3E-27 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL504_RS06425 6138cc3b60127c4fc061dd341232092c 230 PRINTS PR01008 Flagellar L-ring protein signature 207 221 6.3E-27 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL504_RS06425 6138cc3b60127c4fc061dd341232092c 230 PRINTS PR01008 Flagellar L-ring protein signature 170 186 6.3E-27 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL504_RS06425 6138cc3b60127c4fc061dd341232092c 230 PRINTS PR01008 Flagellar L-ring protein signature 72 84 6.3E-27 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL504_RS06425 6138cc3b60127c4fc061dd341232092c 230 PRINTS PR01008 Flagellar L-ring protein signature 144 159 6.3E-27 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL504_RS06425 6138cc3b60127c4fc061dd341232092c 230 Pfam PF02107 Flagellar L-ring protein 48 229 1.2E-57 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL504_RS04535 08fb8ccb080394770747e67fc145cb89 302 Pfam PF00892 EamA-like transporter family 161 284 1.5E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS04535 08fb8ccb080394770747e67fc145cb89 302 Pfam PF00892 EamA-like transporter family 18 149 2.1E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS04535 08fb8ccb080394770747e67fc145cb89 302 SUPERFAMILY SSF103481 197 292 8.24E-14 T 28-03-2018 AL504_RS04535 08fb8ccb080394770747e67fc145cb89 302 SUPERFAMILY SSF103481 52 153 3.79E-15 T 28-03-2018 AL504_RS10135 88137c880fdcb39dee51af7b09d93983 155 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 137 3.1E-32 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL504_RS22435 97f18559e67e7408dff93c5098ee3388 88 Gene3D G3DSA:2.30.170.10 49 88 4.0E-6 T 28-03-2018 AL504_RS17710 9106c55e060ab1ac387f6dfa3948279d 345 Pfam PF04773 FecR protein 140 233 4.0E-21 T 28-03-2018 IPR006860 FecR protein AL504_RS17710 9106c55e060ab1ac387f6dfa3948279d 345 PIRSF PIRSF018266 23 345 1.0E-89 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS17710 9106c55e060ab1ac387f6dfa3948279d 345 Pfam PF16220 Domain of unknown function (DUF4880) 32 73 7.5E-12 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS09375 0a90017b39304c7015bc839839ca9867 293 Pfam PF13557 Putative MetA-pathway of phenol degradation 62 289 2.1E-24 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AL504_RS13165 c92f411fd3248d4f21b5135ff3334bf9 416 Pfam PF00999 Sodium/hydrogen exchanger family 5 367 4.4E-59 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL504_RS13165 c92f411fd3248d4f21b5135ff3334bf9 416 Gene3D G3DSA:1.20.91.10 221 304 1.4E-10 T 28-03-2018 AL504_RS18200 d1c333c064ba2ab4a4eca17e253920ee 96 Pfam PF12728 Helix-turn-helix domain 25 75 3.2E-9 T 28-03-2018 AL504_RS18200 d1c333c064ba2ab4a4eca17e253920ee 96 SUPERFAMILY SSF46955 24 80 2.75E-8 T 28-03-2018 IPR009061 Putative DNA-binding domain AL504_RS18200 d1c333c064ba2ab4a4eca17e253920ee 96 Gene3D G3DSA:1.10.10.10 25 95 5.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 Hamap MF_00416 Flagellar P-ring protein [flgI]. 14 378 38.15 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 34 49 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 134 152 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 200 218 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 95 114 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 117 134 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 49 64 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 264 276 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 174 192 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 PRINTS PR01010 Flagellar P-ring protein signature 69 84 3.7E-84 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS06420 3aba0922374efb5a77e8d74007d9fa86 378 Pfam PF02119 Flagellar P-ring protein 34 377 1.6E-137 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL504_RS08110 7b9d4ce970bb6267f47aa8e9fd566c5c 148 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 2 136 8.0E-25 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 AL504_RS08110 7b9d4ce970bb6267f47aa8e9fd566c5c 148 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 132 5.0E-8 T 28-03-2018 AL504_RS08110 7b9d4ce970bb6267f47aa8e9fd566c5c 148 Pfam PF13994 PgaD-like protein 1 132 1.4E-29 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 AL504_RS22320 016e29cfe1a3918b3d852058996bcb8b 462 Pfam PF12679 ABC-2 family transporter protein 4 292 6.1E-25 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 AL504_RS10475 96091855e488c67382cdd7a257d97cf5 272 Pfam PF01925 Sulfite exporter TauE/SafE 9 262 4.1E-55 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS20795 59049c97af14a61088734c1d7c0a1950 282 Pfam PF07007 Lysozyme inhibitor LprI 28 94 2.9E-10 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AL504_RS08845 27e711912f5a01675955c5e6c0b6f46b 452 Pfam PF11863 Protein of unknown function (DUF3383) 5 446 9.1E-67 T 28-03-2018 IPR021808 Protein of unknown function DUF3383 AL504_RS30215 b2fa81ca47494dbd1be97c94731d75fe 130 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 14 122 1.4E-23 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL504_RS30215 b2fa81ca47494dbd1be97c94731d75fe 130 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 12 127 18.579 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL504_RS26985 3bc91329784b78ddfefa048378602608 256 SUPERFAMILY SSF53335 13 234 2.62E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS26985 3bc91329784b78ddfefa048378602608 256 Gene3D G3DSA:3.40.50.150 9 252 2.7E-13 T 28-03-2018 AL504_RS00865 8e9af38cfb507ed794d46bea120e1339 222 Gene3D G3DSA:2.40.50.110 21 127 0.0011 T 28-03-2018 AL504_RS14685 3b8215b12b180bc3bbcd3ff649a1ff73 178 Gene3D G3DSA:2.60.120.10 1 167 2.0E-27 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS14685 3b8215b12b180bc3bbcd3ff649a1ff73 178 Pfam PF05995 Cysteine dioxygenase type I 57 157 3.4E-11 T 28-03-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 AL504_RS14685 3b8215b12b180bc3bbcd3ff649a1ff73 178 SUPERFAMILY SSF51182 26 162 9.68E-34 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS02905 24839f6413de350a48bffbb7df427f78 193 Gene3D G3DSA:3.40.50.150 1 191 5.5E-32 T 28-03-2018 AL504_RS02905 24839f6413de350a48bffbb7df427f78 193 SUPERFAMILY SSF53335 3 179 8.92E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS02905 24839f6413de350a48bffbb7df427f78 193 Pfam PF13649 Methyltransferase domain 39 128 5.4E-16 T 28-03-2018 AL504_RS29510 169f39359db8915c4f913d9bd367a1bb 271 Pfam PF01925 Sulfite exporter TauE/SafE 6 268 1.6E-38 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS29160 dd2ef1e47c836392fbcf04dccbdd49ea 180 Pfam PF13628 Domain of unknown function (DUF4142) 40 174 1.4E-43 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 AL504_RS29160 dd2ef1e47c836392fbcf04dccbdd49ea 180 Gene3D G3DSA:1.20.1260.10 19 179 5.6E-27 T 28-03-2018 IPR012347 Ferritin-related AL504_RS29735 d2225f8d70eba5d4b0af80020717dd49 415 SUPERFAMILY SSF53474 105 157 4.59E-5 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS29735 d2225f8d70eba5d4b0af80020717dd49 415 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 19 309 2.0E-71 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 AL504_RS29735 d2225f8d70eba5d4b0af80020717dd49 415 Gene3D G3DSA:3.40.50.1820 27 401 6.5E-5 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS23670 47de8376bdf684b6045fdc1a69969669 115 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 110 2.9E-46 T 28-03-2018 IPR007437 Putative member of DMT superfamily AL504_RS23670 47de8376bdf684b6045fdc1a69969669 115 PIRSF PIRSF021239 1 113 1.2E-49 T 28-03-2018 IPR007437 Putative member of DMT superfamily AL504_RS12815 53711472e78ab8335f90456dc2196b32 446 Pfam PF03600 Citrate transporter 14 387 1.2E-52 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL504_RS12815 53711472e78ab8335f90456dc2196b32 446 TIGRFAM TIGR00784 citMHS: citrate transporter 2 438 5.9E-188 T 28-03-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 AL504_RS17430 6ef4557ec640f256eb57d422748e9c37 138 Pfam PF10990 Protein of unknown function (DUF2809) 33 111 8.0E-17 T 28-03-2018 IPR021257 Protein of unknown function DUF2809 AL504_RS09585 21d4451c643cbd83ed0093ae62b0ecbe 889 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 501 829 1.4E-51 T 28-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AL504_RS09585 21d4451c643cbd83ed0093ae62b0ecbe 889 Gene3D G3DSA:1.20.1480.30 290 481 0.0016 T 28-03-2018 AL504_RS09585 21d4451c643cbd83ed0093ae62b0ecbe 889 Pfam PF06791 Prophage tail length tape measure protein 74 274 2.6E-71 T 28-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal AL504_RS09585 21d4451c643cbd83ed0093ae62b0ecbe 889 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 652 725 5.9E-29 T 28-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AL504_RS14510 5d556b30e705c4c0d19d90226f789f42 641 SUPERFAMILY SSF53649 270 593 1.31E-62 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS14510 5d556b30e705c4c0d19d90226f789f42 641 Gene3D G3DSA:3.40.720.10 260 543 1.4E-48 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS14510 5d556b30e705c4c0d19d90226f789f42 641 Pfam PF00884 Sulfatase 272 538 5.4E-39 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL504_RS14510 5d556b30e705c4c0d19d90226f789f42 641 PIRSF PIRSF005091 13 597 3.6E-80 T 28-03-2018 IPR012160 Lipoteichoic acid synthase-like AL504_RS11570 9baec9698d69f744a00bce2669fdc34e 465 Pfam PF12801 4Fe-4S binding domain 65 100 6.6E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS11570 9baec9698d69f744a00bce2669fdc34e 465 Pfam PF12801 4Fe-4S binding domain 161 185 4.2E-4 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL504_RS11570 9baec9698d69f744a00bce2669fdc34e 465 SUPERFAMILY SSF54862 221 228 8.68E-5 T 28-03-2018 AL504_RS11570 9baec9698d69f744a00bce2669fdc34e 465 SUPERFAMILY SSF54862 160 193 8.68E-5 T 28-03-2018 AL504_RS11570 9baec9698d69f744a00bce2669fdc34e 465 SUPERFAMILY SSF54862 70 123 8.68E-5 T 28-03-2018 AL504_RS07775 2d05044e9351aedc37a78cdcc15ff906 244 Pfam PF13302 Acetyltransferase (GNAT) domain 37 178 8.4E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS07775 2d05044e9351aedc37a78cdcc15ff906 244 SUPERFAMILY SSF55729 26 202 2.5E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS07775 2d05044e9351aedc37a78cdcc15ff906 244 Gene3D G3DSA:3.40.630.30 17 210 2.2E-26 T 28-03-2018 AL504_RS07050 68361316e8b7b11869a0ee6ec4fd5c2d 254 Pfam PF01925 Sulfite exporter TauE/SafE 10 246 4.0E-33 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS02835 bcf87b839dd0a6a2a54e6179a637604a 324 PIRSF PIRSF017082 1 324 3.1E-102 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS02835 bcf87b839dd0a6a2a54e6179a637604a 324 SUPERFAMILY SSF53850 115 289 7.84E-13 T 28-03-2018 AL504_RS02835 bcf87b839dd0a6a2a54e6179a637604a 324 Gene3D G3DSA:3.40.190.10 128 236 1.9E-12 T 28-03-2018 AL504_RS02835 bcf87b839dd0a6a2a54e6179a637604a 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 321 2.7E-57 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00795 c97fd88aa4a1ae1df5c40f2e94320d9d 140 Gene3D G3DSA:3.30.1460.30 21 119 4.5E-5 T 28-03-2018 AL504_RS12905 61f254575f981e2aa619dd68c17e9ef4 147 PIRSF PIRSF015875 1 147 1.0E-42 T 28-03-2018 IPR007418 Protein of unknown function DUF474 AL504_RS05745 33f0f4d21a2f38c18ca5fa1d8cb3637c 388 SUPERFAMILY SSF53383 6 386 4.08E-104 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL504_RS05745 33f0f4d21a2f38c18ca5fa1d8cb3637c 388 Gene3D G3DSA:3.40.640.10 34 262 1.2E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL504_RS05745 33f0f4d21a2f38c18ca5fa1d8cb3637c 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 224 237 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL504_RS05745 33f0f4d21a2f38c18ca5fa1d8cb3637c 388 Pfam PF00155 Aminotransferase class I and II 20 379 2.0E-67 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL504_RS05745 33f0f4d21a2f38c18ca5fa1d8cb3637c 388 Gene3D G3DSA:3.90.1150.10 263 388 4.7E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL504_RS27055 d019bce8701c8f2a4eefaf709cf9eba5 128 Pfam PF03994 Domain of Unknown Function (DUF350) 75 127 1.9E-8 T 28-03-2018 IPR007140 Protein of unknown function DUF350 AL504_RS27055 d019bce8701c8f2a4eefaf709cf9eba5 128 Pfam PF03994 Domain of Unknown Function (DUF350) 10 63 4.6E-11 T 28-03-2018 IPR007140 Protein of unknown function DUF350 AL504_RS05085 d02435d13a9671626c3fb6d097d568ca 223 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL504_RS05085 d02435d13a9671626c3fb6d097d568ca 223 SMART SM00382 35 220 5.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL504_RS05085 d02435d13a9671626c3fb6d097d568ca 223 SUPERFAMILY SSF52540 7 221 9.22E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS05085 d02435d13a9671626c3fb6d097d568ca 223 Pfam PF00005 ABC transporter 26 171 6.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL504_RS05085 d02435d13a9671626c3fb6d097d568ca 223 Gene3D G3DSA:3.40.50.300 2 223 3.5E-61 T 28-03-2018 AL504_RS15910 184e920f366619a548b1915f278141c2 246 Gene3D G3DSA:3.40.1130.10 34 245 9.6E-31 T 28-03-2018 AL504_RS15910 184e920f366619a548b1915f278141c2 246 SUPERFAMILY SSF69593 6 176 3.79E-28 T 28-03-2018 AL504_RS15910 184e920f366619a548b1915f278141c2 246 Pfam PF01553 Acyltransferase 64 176 5.7E-21 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS15910 184e920f366619a548b1915f278141c2 246 SMART SM00563 67 179 2.6E-33 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL504_RS07255 240f9fc413f9e8369fc199bbf5750a03 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 309 7.0E-72 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL504_RS07255 240f9fc413f9e8369fc199bbf5750a03 337 PIRSF PIRSF006470 2 334 1.3E-69 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS07255 240f9fc413f9e8369fc199bbf5750a03 337 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 37 290 2.2E-69 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL504_RS11835 de695a885c208641020d4c419166bb5c 290 Gene3D G3DSA:3.60.21.10 14 256 8.4E-27 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS11835 de695a885c208641020d4c419166bb5c 290 Pfam PF00149 Calcineurin-like phosphoesterase 21 218 3.1E-10 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL504_RS11835 de695a885c208641020d4c419166bb5c 290 SUPERFAMILY SSF56300 19 136 1.12E-31 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS11835 de695a885c208641020d4c419166bb5c 290 SUPERFAMILY SSF56300 192 256 1.12E-31 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL504_RS15450 259354e1066cadc9e0ad8369b4ba5ee2 90 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 7 70 2.6E-7 T 28-03-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AL504_RS04255 613e7d4b4a5ff5e109cc07b096a2821c 366 Pfam PF05359 Domain of Unknown Function (DUF748) 145 282 4.1E-15 T 28-03-2018 IPR008023 Protein of unknown function DUF748 AL504_RS13400 29538a798d684b7d6f93e9c89455786d 390 Pfam PF05762 VWA domain containing CoxE-like protein 184 269 2.9E-7 T 28-03-2018 IPR008912 Uncharacterised protein family CoxE-like AL504_RS27355 9c174035cf686c35e56ca25352ca292a 64 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 3.7E-18 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 AL504_RS26625 0218d388f40d015dfa339e6d9bfd3308 254 Pfam PF01925 Sulfite exporter TauE/SafE 10 242 4.2E-16 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS04320 cc70c79f1d5d25da35b8dc2609fccd18 206 Pfam PF13628 Domain of unknown function (DUF4142) 33 169 1.1E-30 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 AL504_RS04320 cc70c79f1d5d25da35b8dc2609fccd18 206 Gene3D G3DSA:1.20.1260.10 22 172 1.0E-22 T 28-03-2018 IPR012347 Ferritin-related AL504_RS16765 033f77b44e978ed11b28aa007eb37b8b 409 Pfam PF02515 CoA-transferase family III 8 386 2.8E-134 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS16765 033f77b44e978ed11b28aa007eb37b8b 409 Gene3D G3DSA:3.40.50.10540 2 408 6.9E-159 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS16765 033f77b44e978ed11b28aa007eb37b8b 409 SUPERFAMILY SSF89796 4 407 1.96E-144 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS02575 ddfea23d0c27bb82f5401ca659777a68 462 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 435 1.3E-38 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL504_RS13380 910ebc78343133f67bfb1a0d7ea46a17 141 Pfam PF08897 Domain of unknown function (DUF1841) 5 136 7.8E-58 T 28-03-2018 IPR014993 Protein of unknown function DUF1841 AL504_RS25805 b263d0cceb43b81ae24325825f64fae4 821 Pfam PF11339 Protein of unknown function (DUF3141) 26 603 2.2E-294 T 28-03-2018 IPR024501 Protein of unknown function DUF3141 AL504_RS25805 b263d0cceb43b81ae24325825f64fae4 821 Gene3D G3DSA:3.40.50.1820 34 394 7.6E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS25805 b263d0cceb43b81ae24325825f64fae4 821 SUPERFAMILY SSF53474 55 380 7.65E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS01930 ab205b400ad3eef39ad37dc259f5cfe0 161 SUPERFAMILY SSF160719 30 143 3.66E-11 T 28-03-2018 AL504_RS01930 ab205b400ad3eef39ad37dc259f5cfe0 161 Gene3D G3DSA:3.10.450.40 4 145 5.0E-25 T 28-03-2018 AL504_RS01930 ab205b400ad3eef39ad37dc259f5cfe0 161 Pfam PF04965 Gene 25-like lysozyme 30 130 2.3E-21 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL504_RS01930 ab205b400ad3eef39ad37dc259f5cfe0 161 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 150 5.2E-37 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AL504_RS03415 06242b6f87a4bbf0a264a243da8df70c 338 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 2.9E-30 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS03415 06242b6f87a4bbf0a264a243da8df70c 338 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL504_RS03415 06242b6f87a4bbf0a264a243da8df70c 338 Gene3D G3DSA:3.40.190.10 136 265 1.7E-17 T 28-03-2018 AL504_RS03415 06242b6f87a4bbf0a264a243da8df70c 338 SUPERFAMILY SSF53850 25 257 8.64E-46 T 28-03-2018 AL504_RS03415 06242b6f87a4bbf0a264a243da8df70c 338 Gene3D G3DSA:3.40.190.10 24 135 4.4E-12 T 28-03-2018 AL504_RS03415 06242b6f87a4bbf0a264a243da8df70c 338 SMART SM00062 34 263 1.6E-42 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL504_RS05280 d480fc4297915b64f54888497631df56 160 Pfam PF01899 Na+/H+ ion antiporter subunit 11 158 9.3E-40 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AL504_RS05280 d480fc4297915b64f54888497631df56 160 PIRSF PIRSF019239 2 160 1.7E-35 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AL504_RS19890 7c53e2fd03b9cd9dea51e32086363996 380 Gene3D G3DSA:3.40.50.1110 18 245 2.2E-7 T 28-03-2018 AL504_RS19890 7c53e2fd03b9cd9dea51e32086363996 380 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 102 365 3.5E-77 T 28-03-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain AL504_RS22955 cc7d2e966cb6a26b8d94fe694fd0cc7e 187 SUPERFAMILY SSF51283 3 186 2.36E-52 T 28-03-2018 IPR029054 dUTPase-like AL504_RS22955 cc7d2e966cb6a26b8d94fe694fd0cc7e 187 Hamap MF_00146 dCTP deaminase [dcd]. 2 187 27.905 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AL504_RS22955 cc7d2e966cb6a26b8d94fe694fd0cc7e 187 Pfam PF00692 dUTPase 81 183 7.4E-7 T 28-03-2018 IPR029054 dUTPase-like AL504_RS22955 cc7d2e966cb6a26b8d94fe694fd0cc7e 187 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 13 186 5.6E-47 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AL504_RS22955 cc7d2e966cb6a26b8d94fe694fd0cc7e 187 Gene3D G3DSA:2.70.40.10 1 160 3.5E-57 T 28-03-2018 AL504_RS08730 e97a26302d1c138221ddb0ff9bad9bd1 91 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 3 76 1.9E-26 T 28-03-2018 IPR018680 Protein of unknown function DUF2164 AL504_RS23235 d59f16afb68315553ae9d4f5a6dac764 72 Pfam PF10932 Protein of unknown function (DUF2783) 2 59 1.2E-30 T 28-03-2018 IPR021233 Protein of unknown function DUF2783 AL504_RS14720 8afc4975fbeb1a311ec41833a7e35365 135 Pfam PF05258 Protein of unknown function (DUF721) 8 70 3.9E-7 T 28-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AL504_RS22440 6725ca9bde5e00339dfa4a641308e32f 280 Pfam PF01578 Cytochrome C assembly protein 60 276 4.0E-24 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL504_RS24135 0e5f69981cd55ab370323d697db2e961 372 Pfam PF01757 Acyltransferase family 8 343 2.1E-25 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL504_RS22480 336817ea41c56af3f1705bd1a7258229 397 Gene3D G3DSA:3.40.50.10540 1 397 1.1E-136 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS22480 336817ea41c56af3f1705bd1a7258229 397 Pfam PF02515 CoA-transferase family III 6 373 4.2E-123 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS22480 336817ea41c56af3f1705bd1a7258229 397 SUPERFAMILY SSF89796 5 396 2.75E-128 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS25410 95f55e3867dbf1a1d3943fc12e28e8ed 377 Pfam PF05175 Methyltransferase small domain 194 313 1.2E-11 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL504_RS25410 95f55e3867dbf1a1d3943fc12e28e8ed 377 SUPERFAMILY SSF53335 165 314 2.69E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL504_RS25410 95f55e3867dbf1a1d3943fc12e28e8ed 377 Gene3D G3DSA:3.40.50.150 53 376 1.7E-31 T 28-03-2018 AL504_RS25410 95f55e3867dbf1a1d3943fc12e28e8ed 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL504_RS22860 17ef64ebfb1b1cefdd86fb6c0a75376f 315 Pfam PF16220 Domain of unknown function (DUF4880) 7 48 1.2E-13 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS22860 17ef64ebfb1b1cefdd86fb6c0a75376f 315 PIRSF PIRSF018266 1 313 1.1E-64 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS22860 17ef64ebfb1b1cefdd86fb6c0a75376f 315 Pfam PF04773 FecR protein 112 197 6.3E-17 T 28-03-2018 IPR006860 FecR protein AL504_RS23975 9cecd27738f0964f1c89a710c5ea34eb 326 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 2.2E-15 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS23975 9cecd27738f0964f1c89a710c5ea34eb 326 PIRSF PIRSF018266 5 324 1.2E-89 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS23975 9cecd27738f0964f1c89a710c5ea34eb 326 Pfam PF04773 FecR protein 113 210 1.9E-18 T 28-03-2018 IPR006860 FecR protein AL504_RS00620 434ae3e391c965d30b1d543e02d6bf57 251 Pfam PF07277 SapC 19 235 1.9E-70 T 28-03-2018 IPR010836 SapC AL504_RS01245 c6532033dda148669911249f370374cf 402 Gene3D G3DSA:3.80.10.10 174 299 1.8E-5 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL504_RS00855 92c7a4ade6c6a57939753c2042c28c73 406 Pfam PF02515 CoA-transferase family III 5 383 2.4E-135 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS00855 92c7a4ade6c6a57939753c2042c28c73 406 SUPERFAMILY SSF89796 4 406 2.09E-144 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS00855 92c7a4ade6c6a57939753c2042c28c73 406 Gene3D G3DSA:3.40.50.10540 2 406 1.6E-159 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS10060 d7e912221daa7e8afdc79b5d8782a046 277 SUPERFAMILY SSF53474 31 271 3.53E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS10060 d7e912221daa7e8afdc79b5d8782a046 277 Pfam PF12697 Alpha/beta hydrolase family 44 267 1.1E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS10060 d7e912221daa7e8afdc79b5d8782a046 277 Gene3D G3DSA:3.40.50.1820 17 277 6.7E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS04040 4c59cc9115cc9e7503c31037abe942ea 159 SUPERFAMILY SSF54427 7 159 2.46E-78 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS04040 4c59cc9115cc9e7503c31037abe942ea 159 Gene3D G3DSA:3.10.450.50 15 159 2.0E-69 T 28-03-2018 AL504_RS04040 4c59cc9115cc9e7503c31037abe942ea 159 Pfam PF07080 Protein of unknown function (DUF1348) 12 141 1.7E-63 T 28-03-2018 IPR009783 Protein of unknown function DUF1348 AL504_RS21525 ab524162a3c299e3ad58be92e982d6eb 302 Gene3D G3DSA:3.40.50.1820 21 301 7.1E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS21525 ab524162a3c299e3ad58be92e982d6eb 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 127 140 6.0E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS21525 ab524162a3c299e3ad58be92e982d6eb 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 95 6.0E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS21525 ab524162a3c299e3ad58be92e982d6eb 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 241 255 6.0E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS21525 ab524162a3c299e3ad58be92e982d6eb 302 SUPERFAMILY SSF53474 38 297 2.24E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS21525 ab524162a3c299e3ad58be92e982d6eb 302 Pfam PF12697 Alpha/beta hydrolase family 56 290 9.0E-21 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS18630 6d00b43ce2b527582d19197448fd570d 403 SUPERFAMILY SSF53822 30 401 2.15E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS18630 6d00b43ce2b527582d19197448fd570d 403 Pfam PF13458 Periplasmic binding protein 30 366 4.5E-87 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS18630 6d00b43ce2b527582d19197448fd570d 403 Gene3D G3DSA:3.40.50.2300 14 164 9.3E-17 T 28-03-2018 AL504_RS18630 6d00b43ce2b527582d19197448fd570d 403 Gene3D G3DSA:3.40.50.2300 165 348 8.5E-33 T 28-03-2018 AL504_RS03980 97a3c9e4e2257bff8797fc8f60b22fa1 351 Pfam PF11740 Plasmid replication region DNA-binding N-term 6 123 2.5E-24 T 28-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 495 512 2.3E-20 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 108 126 2.3E-20 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 126 145 2.3E-20 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 37 62 2.3E-20 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 471 486 2.3E-20 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 SUPERFAMILY SSF56235 4 356 7.91E-132 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 SUPERFAMILY SSF56235 414 609 7.91E-132 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL504_RS25925 060b554f1f182606351e7291466dbcfe 610 Pfam PF01019 Gamma-glutamyltranspeptidase 31 602 2.3E-118 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL504_RS06225 cda9abca3ddb0b80843ad9eb897c2ae3 166 Pfam PF01863 Protein of unknown function DUF45 93 152 1.1E-10 T 28-03-2018 IPR002725 Protein of unknown function DUF45 AL504_RS01830 bebec6f87d5604cb9b1367dcfb8f87b6 327 Gene3D G3DSA:3.40.1730.10 10 304 3.9E-35 T 28-03-2018 AL504_RS01830 bebec6f87d5604cb9b1367dcfb8f87b6 327 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 13 140 2.6E-25 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL504_RS01830 bebec6f87d5604cb9b1367dcfb8f87b6 327 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 12 145 3.4E-35 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL504_RS09035 7608244c8519e9d9f22c8d77954a95b4 391 Pfam PF01757 Acyltransferase family 21 365 2.5E-27 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL504_RS04020 59cf6e21dc78c3ec53f7145228ed167d 138 Pfam PF07681 DoxX 17 98 2.4E-17 T 28-03-2018 IPR032808 DoxX family AL504_RS16460 78873ab7e82594e203fecd39c69e1a7a 212 Pfam PF02036 SCP-2 sterol transfer family 18 112 8.2E-10 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL504_RS06445 4559e13b699a62f1583eb3605ac87855 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 75 1.6E-21 T 28-03-2018 IPR005648 Flagellar hook capping protein AL504_RS06445 4559e13b699a62f1583eb3605ac87855 231 Pfam PF13861 FlgD Tudor-like domain 85 227 1.3E-13 T 28-03-2018 IPR025963 FlgD Tudor-like domain AL504_RS06445 4559e13b699a62f1583eb3605ac87855 231 Pfam PF13860 FlgD Ig-like domain 120 186 5.0E-23 T 28-03-2018 IPR025965 FlgD Ig-like domain AL504_RS04725 7d21d66431676d466e10c20d601c5f28 157 Gene3D G3DSA:3.30.1460.10 5 136 1.8E-10 T 28-03-2018 AL504_RS14895 0882eda4bea5aabd79c82591bef86739 256 Pfam PF04402 Protein of unknown function (DUF541) 51 252 2.2E-26 T 28-03-2018 IPR007497 Protein of unknown function DUF541 AL504_RS00325 d5a31748a0a1e38574aca09a961826f1 322 Gene3D G3DSA:2.40.128.130 53 322 1.4E-6 T 28-03-2018 AL504_RS10075 7458668e7cdd96f03ac1a2c72e5a2080 318 SUPERFAMILY SSF53850 108 284 9.0E-15 T 28-03-2018 AL504_RS10075 7458668e7cdd96f03ac1a2c72e5a2080 318 PIRSF PIRSF017082 1 317 3.2E-69 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10075 7458668e7cdd96f03ac1a2c72e5a2080 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 41 314 5.1E-75 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS10075 7458668e7cdd96f03ac1a2c72e5a2080 318 Gene3D G3DSA:3.40.190.10 141 288 6.0E-10 T 28-03-2018 AL504_RS20655 2cd9cb8cda6c82bedbc606ee5937a74a 297 SUPERFAMILY SSF53474 6 292 2.34E-62 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS20655 2cd9cb8cda6c82bedbc606ee5937a74a 297 Pfam PF00561 alpha/beta hydrolase fold 28 146 2.9E-19 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL504_RS20655 2cd9cb8cda6c82bedbc606ee5937a74a 297 Gene3D G3DSA:3.40.50.1820 6 293 4.3E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS02180 fb5fde7881e98ac7685856cbc0216baa 117 Pfam PF03795 YCII-related domain 1 112 2.4E-18 T 28-03-2018 IPR005545 YCII-related AL504_RS02180 fb5fde7881e98ac7685856cbc0216baa 117 SUPERFAMILY SSF54909 1 114 1.05E-31 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS02180 fb5fde7881e98ac7685856cbc0216baa 117 Gene3D G3DSA:3.30.70.1060 1 115 4.1E-35 T 28-03-2018 AL504_RS24450 8e05fa6d6ee0ae060a8e1bdb01ea5a4f 503 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 436 3.3E-130 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL504_RS30885 071acc5f55753c99ffad0842d2f4153a 146 Pfam PF08774 VRR-NUC domain 40 124 1.7E-12 T 28-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL504_RS30885 071acc5f55753c99ffad0842d2f4153a 146 SMART SM00990 22 125 5.5E-9 T 28-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL504_RS27920 317ac8868d57ff3ae591450aa92e4e24 269 SUPERFAMILY SSF161098 71 254 3.4E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27920 317ac8868d57ff3ae591450aa92e4e24 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 262 5.0E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS27920 317ac8868d57ff3ae591450aa92e4e24 269 Gene3D G3DSA:1.10.3720.10 18 268 6.0E-21 T 28-03-2018 AL504_RS12390 196c8a4de75b7fc32b0f11fd6d33b3c8 132 Pfam PF01641 SelR domain 10 129 1.2E-53 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL504_RS12390 196c8a4de75b7fc32b0f11fd6d33b3c8 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.834 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL504_RS12390 196c8a4de75b7fc32b0f11fd6d33b3c8 132 Gene3D G3DSA:2.170.150.20 1 132 4.6E-60 T 28-03-2018 AL504_RS12390 196c8a4de75b7fc32b0f11fd6d33b3c8 132 SUPERFAMILY SSF51316 5 131 1.26E-59 T 28-03-2018 IPR011057 Mss4-like AL504_RS12390 196c8a4de75b7fc32b0f11fd6d33b3c8 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 131 2.0E-55 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL504_RS20580 28bc8ea96574d65a7202492217fa1c08 227 Pfam PF06226 Protein of unknown function (DUF1007) 14 226 1.7E-54 T 28-03-2018 IPR010412 Protein of unknown function DUF1007 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 SUPERFAMILY SSF51621 6 430 2.74E-157 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 PIRSF PIRSF001362 1 433 3.9E-239 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 ProSitePatterns PS00161 Isocitrate lyase signature. 191 196 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 254 430 3.3E-83 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 253 2.4E-110 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 Pfam PF00463 Isocitrate lyase family 254 430 1.0E-46 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 Pfam PF00463 Isocitrate lyase family 13 253 3.0E-58 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL504_RS27175 9b94ac70ef4988961ae2c4072fba644f 439 Gene3D G3DSA:3.20.20.60 1 413 2.2E-149 T 28-03-2018 AL504_RS18190 ade122485ef93debcee35f86f0f86e69 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 114 4.6E-43 T 28-03-2018 IPR021341 Protein of unknown function DUF2958 AL504_RS13010 18a1e992df6069b1e435e30638c0b202 699 Gene3D G3DSA:2.120.10.30 182 652 2.6E-10 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL504_RS13010 18a1e992df6069b1e435e30638c0b202 699 SUPERFAMILY SSF63829 336 429 1.96E-10 T 28-03-2018 AL504_RS13010 18a1e992df6069b1e435e30638c0b202 699 SUPERFAMILY SSF63829 475 495 1.96E-10 T 28-03-2018 AL504_RS13010 18a1e992df6069b1e435e30638c0b202 699 SUPERFAMILY SSF63829 526 655 1.96E-10 T 28-03-2018 AL504_RS13010 18a1e992df6069b1e435e30638c0b202 699 Pfam PF05787 Bacterial protein of unknown function (DUF839) 81 655 2.3E-166 T 28-03-2018 IPR008557 Protein of unknown function DUF839 AL504_RS09255 4ef6be64a3162ca0a130508682f846b7 308 TIGRFAM TIGR02408 ectoine_ThpD: ectoine hydroxylase 21 298 9.3E-151 T 28-03-2018 IPR012774 Ectoine dioxygenase GO:0016706|GO:0055114 AL504_RS09255 4ef6be64a3162ca0a130508682f846b7 308 Gene3D G3DSA:2.60.120.620 21 282 3.2E-46 T 28-03-2018 AL504_RS09255 4ef6be64a3162ca0a130508682f846b7 308 SUPERFAMILY SSF51197 34 290 1.83E-65 T 28-03-2018 AL504_RS09255 4ef6be64a3162ca0a130508682f846b7 308 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 45 260 2.5E-33 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 Pfam PF13091 PLD-like domain 322 458 6.7E-21 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 Pfam PF13091 PLD-like domain 78 224 4.5E-14 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 SUPERFAMILY SSF56024 46 240 1.19E-43 T 28-03-2018 AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 SUPERFAMILY SSF56024 280 477 3.59E-31 T 28-03-2018 AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 SMART SM00155 404 431 4.5E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 SMART SM00155 165 192 0.051 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 Gene3D G3DSA:3.30.870.10 26 238 6.3E-30 T 28-03-2018 AL504_RS24890 bbc37996f616736079c625fe5b2da4d5 513 Gene3D G3DSA:3.30.870.10 320 499 3.7E-23 T 28-03-2018 AL504_RS03975 a6bcdce9106c562c16f1766bdcbb1ce4 366 Pfam PF01594 AI-2E family transporter 18 347 1.6E-32 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AL504_RS08900 cd3e92e9032b07b2faa9df4075f8cb2d 507 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 346 492 1.9E-46 T 28-03-2018 IPR006517 Archaeophage PsiM2, terminase large subunit AL504_RS08900 cd3e92e9032b07b2faa9df4075f8cb2d 507 Pfam PF17289 Terminase RNaseH-like domain 335 488 2.5E-16 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like AL504_RS04475 7f6a1b24f56f03b87582cf3b7bb44eb9 771 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 357 469 3.0E-18 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 AL504_RS04475 7f6a1b24f56f03b87582cf3b7bb44eb9 771 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 98 334 4.8E-11 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 AL504_RS24305 ad4a123bf4622ef7e144cbb4969bf150 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 93 4.4E-19 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AL504_RS29670 86dd094c6d51ed97c33cdaf0d3e64d70 200 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 113 189 4.8E-27 T 28-03-2018 IPR026834 LHH AL504_RS06375 41ab6b754967bb721dd5df21e99eee3c 262 Pfam PF01311 Bacterial export proteins, family 1 15 246 9.5E-74 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS06375 41ab6b754967bb721dd5df21e99eee3c 262 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 3.6E-74 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AL504_RS06375 41ab6b754967bb721dd5df21e99eee3c 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 2.3E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS06375 41ab6b754967bb721dd5df21e99eee3c 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 2.3E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS06375 41ab6b754967bb721dd5df21e99eee3c 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.3E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS06375 41ab6b754967bb721dd5df21e99eee3c 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 2.3E-30 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL504_RS16305 dda50576145e08d4ac39d649bbf1b9f2 229 SUPERFAMILY SSF55920 18 222 1.96E-21 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS16305 dda50576145e08d4ac39d649bbf1b9f2 229 Gene3D G3DSA:3.90.230.10 16 225 3.0E-12 T 28-03-2018 AL504_RS16305 dda50576145e08d4ac39d649bbf1b9f2 229 Pfam PF00557 Metallopeptidase family M24 24 220 6.3E-11 T 28-03-2018 IPR000994 Peptidase M24 AL504_RS21380 904d49e5a7b2ed5c8ec8cce103f295c1 116 Gene3D G3DSA:3.40.250.10 6 116 5.8E-29 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS21380 904d49e5a7b2ed5c8ec8cce103f295c1 116 Pfam PF00581 Rhodanese-like domain 18 107 7.3E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS21380 904d49e5a7b2ed5c8ec8cce103f295c1 116 SUPERFAMILY SSF52821 15 114 3.93E-32 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS21380 904d49e5a7b2ed5c8ec8cce103f295c1 116 SMART SM00450 16 111 4.4E-24 T 28-03-2018 IPR001763 Rhodanese-like domain AL504_RS20560 71f523f6a64ecc7c51c4f30f3a69e170 167 Gene3D G3DSA:1.10.10.10 6 98 6.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20560 71f523f6a64ecc7c51c4f30f3a69e170 167 SUPERFAMILY SSF46785 20 150 1.12E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS20560 71f523f6a64ecc7c51c4f30f3a69e170 167 Pfam PF01475 Ferric uptake regulator family 27 145 4.0E-16 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL504_RS15640 9e5e43049712b8574ce623d141b826cf 454 SUPERFAMILY SSF111283 17 454 1.44E-122 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL504_RS15640 9e5e43049712b8574ce623d141b826cf 454 Pfam PF01523 Putative modulator of DNA gyrase 38 327 2.4E-61 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL504_RS15640 9e5e43049712b8574ce623d141b826cf 454 Gene3D G3DSA:3.30.2290.10 3 236 5.2E-58 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL504_RS00845 d2ff9ad61cc449a866e4a616f883f57c 407 Pfam PF02515 CoA-transferase family III 5 383 6.1E-131 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS00845 d2ff9ad61cc449a866e4a616f883f57c 407 SUPERFAMILY SSF89796 3 407 9.55E-142 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS00845 d2ff9ad61cc449a866e4a616f883f57c 407 Gene3D G3DSA:3.40.50.10540 1 407 1.4E-154 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS17795 6259084da1f8813e19ca4b4132b948d4 265 Pfam PF02104 SURF1 family 20 238 9.9E-29 T 28-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS10970 4e1eb3d644c96c9d52fa55e92e28c47d 189 Pfam PF01966 HD domain 29 100 4.7E-5 T 28-03-2018 IPR006674 HD domain AL504_RS10970 4e1eb3d644c96c9d52fa55e92e28c47d 189 SUPERFAMILY SSF109604 6 63 5.5E-8 T 28-03-2018 AL504_RS10970 4e1eb3d644c96c9d52fa55e92e28c47d 189 Gene3D G3DSA:1.10.3210.10 2 137 1.0E-5 T 28-03-2018 AL504_RS10970 4e1eb3d644c96c9d52fa55e92e28c47d 189 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 3 178 3.5E-74 T 28-03-2018 IPR017670 Phosphonate degradation operon associated HDIG domain protein AL504_RS20810 2a17bfa65fa933c1c1ba9c93db1615e2 154 Pfam PF01230 HIT domain 25 100 3.3E-12 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL504_RS20810 2a17bfa65fa933c1c1ba9c93db1615e2 154 Gene3D G3DSA:3.30.428.10 2 151 2.1E-27 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL504_RS20810 2a17bfa65fa933c1c1ba9c93db1615e2 154 SUPERFAMILY SSF54197 5 138 3.4E-35 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL504_RS00825 a533e38257f12f6827969dbe81c87373 302 Gene3D G3DSA:3.20.20.140 10 302 3.9E-36 T 28-03-2018 AL504_RS00825 a533e38257f12f6827969dbe81c87373 302 Pfam PF04909 Amidohydrolase 34 301 1.6E-27 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL504_RS00825 a533e38257f12f6827969dbe81c87373 302 SUPERFAMILY SSF51556 29 301 4.99E-62 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL504_RS05355 41a661eb696908456b52e266e041e1c8 191 Pfam PF04471 Restriction endonuclease 81 186 9.2E-19 T 28-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AL504_RS05355 41a661eb696908456b52e266e041e1c8 191 Gene3D G3DSA:3.40.1350.10 73 189 3.3E-11 T 28-03-2018 AL504_RS05355 41a661eb696908456b52e266e041e1c8 191 SUPERFAMILY SSF52980 83 189 9.65E-10 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL504_RS26630 934954f947100337a5393248482b3130 146 Gene3D G3DSA:3.10.580.10 2 65 5.7E-11 T 28-03-2018 AL504_RS26630 934954f947100337a5393248482b3130 146 Gene3D G3DSA:3.10.580.10 66 143 2.0E-15 T 28-03-2018 AL504_RS26630 934954f947100337a5393248482b3130 146 Pfam PF00571 CBS domain 73 124 2.0E-11 T 28-03-2018 IPR000644 CBS domain AL504_RS26630 934954f947100337a5393248482b3130 146 Pfam PF00571 CBS domain 12 62 4.2E-11 T 28-03-2018 IPR000644 CBS domain AL504_RS26630 934954f947100337a5393248482b3130 146 SUPERFAMILY SSF54631 10 142 4.04E-33 T 28-03-2018 AL504_RS26630 934954f947100337a5393248482b3130 146 SMART SM00116 15 62 1.1E-6 T 28-03-2018 IPR000644 CBS domain AL504_RS26630 934954f947100337a5393248482b3130 146 SMART SM00116 80 127 9.4E-8 T 28-03-2018 IPR000644 CBS domain AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 SUPERFAMILY SSF52540 220 312 1.7E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 SUPERFAMILY SSF52540 340 503 1.7E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 SUPERFAMILY SSF52540 1 215 1.63E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 Gene3D G3DSA:3.40.50.300 206 520 5.1E-21 T 28-03-2018 AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 PIRSF PIRSF003128 1 548 9.3E-161 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 503 9.2E-20 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 Gene3D G3DSA:3.40.50.300 1 204 8.0E-27 T 28-03-2018 AL504_RS13470 b0dd5cc9e0252233cd48eff3c917c1e8 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 545 3.1E-158 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL504_RS19820 65380577ec54cbd3da818e57bed59171 456 SUPERFAMILY SSF56935 163 315 4.89E-5 T 28-03-2018 AL504_RS19820 65380577ec54cbd3da818e57bed59171 456 SUPERFAMILY SSF56935 26 63 4.89E-5 T 28-03-2018 AL504_RS19820 65380577ec54cbd3da818e57bed59171 456 SUPERFAMILY SSF56935 107 121 4.89E-5 T 28-03-2018 AL504_RS19820 65380577ec54cbd3da818e57bed59171 456 Gene3D G3DSA:2.40.160.10 18 327 7.9E-6 T 28-03-2018 AL504_RS03260 c9dc4e56feebc0ddb761c4f3627cb17c 266 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 226 244 9.8E-6 T 28-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AL504_RS03260 c9dc4e56feebc0ddb761c4f3627cb17c 266 Pfam PF06276 Ferric iron reductase FhuF-like transporter 69 208 5.1E-19 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain AL504_RS03260 c9dc4e56feebc0ddb761c4f3627cb17c 266 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 66 244 3.1E-38 T 28-03-2018 IPR008090 Ferric iron reductase AL504_RS21190 56ff7d12eafc7776eeadcf959b27b0d3 127 Pfam PF13663 Domain of unknown function (DUF4148) 56 86 6.1E-7 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS21190 56ff7d12eafc7776eeadcf959b27b0d3 127 Pfam PF13663 Domain of unknown function (DUF4148) 91 123 1.1E-8 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS21190 56ff7d12eafc7776eeadcf959b27b0d3 127 Pfam PF13663 Domain of unknown function (DUF4148) 1 51 1.8E-12 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS21190 56ff7d12eafc7776eeadcf959b27b0d3 127 Gene3D G3DSA:1.10.4030.10 3 85 0.0075 T 28-03-2018 AL504_RS25135 168543e8fff336f26e1c2317a8f837c3 320 SUPERFAMILY SSF53474 181 317 1.73E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS25135 168543e8fff336f26e1c2317a8f837c3 320 SUPERFAMILY SSF53474 66 135 1.73E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS25135 168543e8fff336f26e1c2317a8f837c3 320 Gene3D G3DSA:3.40.50.1820 6 319 1.4E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS28505 49adb0f8d8fd99ee35fc04598006a21f 275 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 2 272 60.915 T 28-03-2018 IPR026587 Sirtuin, class II Reactome: R-HSA-2151201 AL504_RS28505 49adb0f8d8fd99ee35fc04598006a21f 275 SUPERFAMILY SSF52467 6 272 7.8E-80 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS28505 49adb0f8d8fd99ee35fc04598006a21f 275 Pfam PF02146 Sir2 family 26 228 9.0E-47 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 AL504_RS28505 49adb0f8d8fd99ee35fc04598006a21f 275 Gene3D G3DSA:3.40.50.1220 2 274 1.4E-63 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL504_RS13750 35bf31fbc50dd74ad504d2418d88b2e8 321 Gene3D G3DSA:3.40.50.1100 162 321 1.4E-33 T 28-03-2018 AL504_RS13750 35bf31fbc50dd74ad504d2418d88b2e8 321 SUPERFAMILY SSF53686 7 314 1.96E-89 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS13750 35bf31fbc50dd74ad504d2418d88b2e8 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 5.1E-69 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL504_RS13750 35bf31fbc50dd74ad504d2418d88b2e8 321 Gene3D G3DSA:3.40.50.1100 15 161 3.3E-36 T 28-03-2018 AL504_RS09650 4a04e76f9decd01998ddc5187f5e65e9 472 Pfam PF13264 Domain of unknown function (DUF4055) 248 385 1.3E-41 T 28-03-2018 IPR025129 Domain of unknown function DUF4055 AL504_RS18610 50662dd081ab72136278c06921216295 114 Pfam PF08895 Domain of unknown function (DUF1840) 1 108 1.7E-27 T 28-03-2018 IPR014991 Protein of unknown function DUF1840 AL504_RS20775 02ee272b8626bcd1298686b2334bebc9 189 Pfam PF09851 Short C-terminal domain 161 187 3.2E-9 T 28-03-2018 IPR018649 SHOCT domain AL504_RS20775 02ee272b8626bcd1298686b2334bebc9 189 Pfam PF14470 Bacterial PH domain 42 132 1.8E-16 T 28-03-2018 AL504_RS20775 02ee272b8626bcd1298686b2334bebc9 189 Gene3D G3DSA:2.30.29.50 28 116 3.2E-6 T 28-03-2018 IPR012544 Bacterial Pleckstrin homology domain AL504_RS24205 efa000c783b9695d7a482635f53a38c1 627 Pfam PF03929 PepSY-associated TM region 10 371 3.0E-62 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS25780 3b5933c320424b16d0a88070b3be152c 326 PIRSF PIRSF017082 1 325 1.8E-87 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25780 3b5933c320424b16d0a88070b3be152c 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 319 6.7E-88 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS25780 3b5933c320424b16d0a88070b3be152c 326 Gene3D G3DSA:3.40.190.10 134 293 6.4E-12 T 28-03-2018 AL504_RS25780 3b5933c320424b16d0a88070b3be152c 326 SUPERFAMILY SSF53850 117 288 3.39E-14 T 28-03-2018 AL504_RS12415 8b77846690ddf7f645f774b21f495b82 352 SUPERFAMILY SSF64383 223 333 1.05E-11 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL504_RS12415 8b77846690ddf7f645f774b21f495b82 352 SMART SM00771 208 330 6.5E-27 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL504_RS12415 8b77846690ddf7f645f774b21f495b82 352 Gene3D G3DSA:3.30.1400.10 209 331 1.1E-16 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL504_RS12415 8b77846690ddf7f645f774b21f495b82 352 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 274 320 4.5E-7 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL504_RS22790 5b041fee78529531eb811eef9b3a2f32 72 Gene3D G3DSA:3.30.429.10 1 72 3.2E-29 T 28-03-2018 AL504_RS22790 5b041fee78529531eb811eef9b3a2f32 72 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 1.6E-23 T 28-03-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 AL504_RS22790 5b041fee78529531eb811eef9b3a2f32 72 Pfam PF01361 Tautomerase enzyme 2 61 9.8E-23 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AL504_RS22790 5b041fee78529531eb811eef9b3a2f32 72 SUPERFAMILY SSF55331 2 65 1.69E-22 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL504_RS30950 24f990d3a56fa401b206b49b5d83d61b 100 Gene3D G3DSA:2.40.10.180 2 97 1.6E-5 T 28-03-2018 AL504_RS24140 f970593f979530a1b8da2545e79df205 275 Pfam PF00905 Penicillin binding protein transpeptidase domain 30 258 1.8E-42 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL504_RS24140 f970593f979530a1b8da2545e79df205 275 Gene3D G3DSA:3.40.710.10 15 269 1.0E-28 T 28-03-2018 AL504_RS24140 f970593f979530a1b8da2545e79df205 275 ProSitePatterns PS00337 Beta-lactamase class-D active site. 57 67 - T 28-03-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 AL504_RS24140 f970593f979530a1b8da2545e79df205 275 SUPERFAMILY SSF56601 28 258 1.18E-34 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL504_RS28595 c70a39ad11b1af63315f0fcfe074982e 58 Pfam PF04964 Flp/Fap pilin component 8 52 5.4E-15 T 28-03-2018 IPR007047 Flp/Fap pilin component AL504_RS22020 1b6fb9f6397b1f8a93e78490392dfbd0 372 Pfam PF01594 AI-2E family transporter 14 344 1.1E-38 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AL504_RS12860 7fc2ac3d4c1d31ce3ffc17e021b18c85 351 Gene3D G3DSA:1.20.1050.10 35 185 0.0011 T 28-03-2018 AL504_RS07040 59fa620943a71abafaa77f3deba19429 82 Gene3D G3DSA:1.10.1200.10 6 82 4.6E-6 T 28-03-2018 AL504_RS07040 59fa620943a71abafaa77f3deba19429 82 SUPERFAMILY SSF47336 7 81 1.58E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL504_RS21290 2609b52dac2b1cd8b3b32522e84cecd3 128 SUPERFAMILY SSF46785 10 121 5.65E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS21290 2609b52dac2b1cd8b3b32522e84cecd3 128 Pfam PF01638 HxlR-like helix-turn-helix 24 111 3.3E-25 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AL504_RS21290 2609b52dac2b1cd8b3b32522e84cecd3 128 Gene3D G3DSA:1.10.10.10 6 128 2.8E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS28640 4f60c4511e1c89d14dea3429e3dde11e 332 Pfam PF00482 Type II secretion system (T2SS), protein F 187 313 3.2E-13 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS22405 455db6703969558615f3a5496e5a24b5 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL504_RS22405 455db6703969558615f3a5496e5a24b5 491 Gene3D G3DSA:3.40.309.10 269 466 2.9E-74 T 28-03-2018 AL504_RS22405 455db6703969558615f3a5496e5a24b5 491 Gene3D G3DSA:3.40.605.10 1 268 2.9E-86 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL504_RS22405 455db6703969558615f3a5496e5a24b5 491 Pfam PF00171 Aldehyde dehydrogenase family 15 479 4.2E-168 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL504_RS22405 455db6703969558615f3a5496e5a24b5 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL504_RS22405 455db6703969558615f3a5496e5a24b5 491 SUPERFAMILY SSF53720 7 486 2.23E-161 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL504_RS06295 109fb3a3f2f4b48ce466ee56953d0cce 455 Pfam PF02120 Flagellar hook-length control protein FliK 379 446 8.9E-12 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL504_RS23890 b6767c15c61451c834cadd13d5a87972 460 Gene3D G3DSA:1.10.4100.10 2 310 2.9E-69 T 28-03-2018 AL504_RS23890 b6767c15c61451c834cadd13d5a87972 460 Pfam PF03972 MmgE/PrpD family 9 429 1.1E-89 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 AL504_RS23890 b6767c15c61451c834cadd13d5a87972 460 SUPERFAMILY SSF103378 13 442 9.55E-85 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 AL504_RS17260 85874b0a4c9372bd2a7fa0e5cdb2529d 329 Gene3D G3DSA:2.130.10.10 133 231 1.2E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS17260 85874b0a4c9372bd2a7fa0e5cdb2529d 329 Gene3D G3DSA:2.130.10.10 232 326 2.9E-17 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS17260 85874b0a4c9372bd2a7fa0e5cdb2529d 329 Gene3D G3DSA:2.130.10.10 14 132 9.5E-17 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL504_RS17260 85874b0a4c9372bd2a7fa0e5cdb2529d 329 SUPERFAMILY SSF50974 8 323 2.43E-71 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AL504_RS00235 61a51d41cddb4b53b64684deb3b7c72e 628 Pfam PF03929 PepSY-associated TM region 11 381 5.1E-57 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS15390 c19ddd430fafeb202f2b15d3c48a5816 273 Gene3D G3DSA:1.20.1480.30 62 271 0.017 T 28-03-2018 AL504_RS27585 c9a49c3ea04ed28c8ec30d08b32ac12e 106 Pfam PF01381 Helix-turn-helix 46 86 7.8E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS27585 c9a49c3ea04ed28c8ec30d08b32ac12e 106 SUPERFAMILY SSF47413 46 90 4.15E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL504_RS27585 c9a49c3ea04ed28c8ec30d08b32ac12e 106 Gene3D G3DSA:1.10.10.60 25 63 1.8E-6 T 28-03-2018 AL504_RS27585 c9a49c3ea04ed28c8ec30d08b32ac12e 106 Gene3D G3DSA:1.10.10.10 64 96 1.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS27585 c9a49c3ea04ed28c8ec30d08b32ac12e 106 SMART SM00530 45 103 7.5E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL504_RS25835 32cc930be0939de9a961fa5d13fb13e4 104 Pfam PF13591 MerR HTH family regulatory protein 19 100 5.2E-12 T 28-03-2018 AL504_RS25835 32cc930be0939de9a961fa5d13fb13e4 104 Gene3D G3DSA:1.10.1660.10 10 103 9.6E-6 T 28-03-2018 AL504_RS18145 46eaab37a4d46b30d95ae99c2a7b31a9 274 Pfam PF06067 Domain of unknown function (DUF932) 36 263 2.0E-58 T 28-03-2018 IPR026325 Protein of unknown function DUF932 AL504_RS16950 47bf412ad4a45e0e524d714d91904c03 137 Pfam PF03899 ATP synthase I chain 28 121 1.3E-9 T 28-03-2018 IPR005598 ATP synthase protein I AL504_RS17810 3d3d681c6553b5f924124cebe23661ca 74 Pfam PF11174 Protein of unknown function (DUF2970) 15 70 1.5E-24 T 28-03-2018 IPR021344 Protein of unknown function DUF2970 AL504_RS11585 6dfbc7a91ae1130883dea49440c87e10 178 PIRSF PIRSF017018 1 178 8.4E-86 T 28-03-2018 IPR018470 Periplasmic metal-binding protein Tp34-type AL504_RS11585 6dfbc7a91ae1130883dea49440c87e10 178 Pfam PF10634 Fe2+ transport protein 20 171 1.7E-70 T 28-03-2018 IPR018470 Periplasmic metal-binding protein Tp34-type AL504_RS14195 cd427b1a78d318c8935888fc538d0ca8 212 Pfam PF09335 SNARE associated Golgi protein 46 170 2.6E-21 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL504_RS27590 0759714382cbbfda0eb5b09df73f705d 205 Pfam PF01810 LysE type translocator 16 202 1.3E-35 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS27590 0759714382cbbfda0eb5b09df73f705d 205 PIRSF PIRSF006324 1 205 2.2E-50 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS06340 5f944fd899ec9fee28c2db6686d565a8 452 Pfam PF02120 Flagellar hook-length control protein FliK 328 405 3.1E-22 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL504_RS14505 e1f181b1be06aee647f3a1bd87233e95 690 Pfam PF05170 AsmA family 1 575 8.4E-130 T 28-03-2018 IPR007844 AsmA AL504_RS00955 e3931b4b9dcd6ae7780cdfb5299168a7 323 SUPERFAMILY SSF53850 111 282 1.99E-12 T 28-03-2018 AL504_RS00955 e3931b4b9dcd6ae7780cdfb5299168a7 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 318 4.2E-84 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00955 e3931b4b9dcd6ae7780cdfb5299168a7 323 PIRSF PIRSF017082 1 323 1.0E-82 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS00955 e3931b4b9dcd6ae7780cdfb5299168a7 323 Gene3D G3DSA:3.40.190.10 121 231 2.4E-12 T 28-03-2018 AL504_RS16465 2ae15134a33a4af0bfff957d1768b838 334 Pfam PF04280 Tim44-like domain 209 327 5.1E-12 T 28-03-2018 IPR007379 Tim44-like domain AL504_RS16465 2ae15134a33a4af0bfff957d1768b838 334 SUPERFAMILY SSF54427 209 329 1.29E-15 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS16465 2ae15134a33a4af0bfff957d1768b838 334 SMART SM00978 200 327 1.4E-34 T 28-03-2018 IPR007379 Tim44-like domain AL504_RS23945 8493d9a724f4b3d93494ba9c0a9a24cc 151 Pfam PF03713 Domain of unknown function (DUF305) 33 115 4.6E-18 T 28-03-2018 IPR005183 Domain of unknown function DUF305 AL504_RS23945 8493d9a724f4b3d93494ba9c0a9a24cc 151 Gene3D G3DSA:1.20.1260.10 13 119 8.1E-24 T 28-03-2018 IPR012347 Ferritin-related AL504_RS02015 63ee837d746bd31e9ea6f92ede7a7ff4 278 Pfam PF11828 Protein of unknown function (DUF3348) 1 276 6.4E-93 T 28-03-2018 IPR021783 Protein of unknown function DUF3348 AL504_RS04995 dfdb096a26c78980acfb5f809bfc27fe 329 Gene3D G3DSA:1.10.3470.10 33 324 4.6E-31 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS04995 dfdb096a26c78980acfb5f809bfc27fe 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 309 1.7E-33 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS06120 9d483bf64cb642c35f840dac5dfceab8 153 Pfam PF11008 Protein of unknown function (DUF2846) 16 125 1.0E-14 T 28-03-2018 IPR022548 Domain of unknown function DUF2846 AL504_RS28320 da5124ea31cdb226803f495a27a3abb7 342 Pfam PF03812 2-keto-3-deoxygluconate permease 13 316 3.3E-107 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AL504_RS28320 da5124ea31cdb226803f495a27a3abb7 342 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 33 316 5.0E-104 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AL504_RS19765 11ee8ad3f6e5e1ee727c8a765fca97ab 759 Gene3D G3DSA:3.20.20.80 49 493 1.1E-35 T 28-03-2018 AL504_RS19765 11ee8ad3f6e5e1ee727c8a765fca97ab 759 SUPERFAMILY SSF51445 73 237 3.72E-25 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS19765 11ee8ad3f6e5e1ee727c8a765fca97ab 759 SUPERFAMILY SSF51445 335 482 3.72E-25 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL504_RS30945 e87962b455e6a379bf527fc1df6696c9 334 Pfam PF03864 Phage major capsid protein E 12 332 2.5E-73 T 28-03-2018 IPR005564 Major capsid protein GpE GO:0019028 AL504_RS30945 e87962b455e6a379bf527fc1df6696c9 334 Gene3D G3DSA:3.15.30.10 8 203 5.3E-10 T 28-03-2018 AL504_RS28410 5d0f6e675dc7488919f843dcb2804e17 425 Gene3D G3DSA:3.40.50.2000 13 215 1.3E-25 T 28-03-2018 AL504_RS28410 5d0f6e675dc7488919f843dcb2804e17 425 Gene3D G3DSA:3.40.50.2000 216 386 5.9E-30 T 28-03-2018 AL504_RS28410 5d0f6e675dc7488919f843dcb2804e17 425 Pfam PF13692 Glycosyl transferases group 1 228 368 3.4E-15 T 28-03-2018 AL504_RS28410 5d0f6e675dc7488919f843dcb2804e17 425 SUPERFAMILY SSF53756 2 397 2.62E-53 T 28-03-2018 AL504_RS28410 5d0f6e675dc7488919f843dcb2804e17 425 Pfam PF13579 Glycosyl transferase 4-like domain 15 202 6.6E-29 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL504_RS30385 5175ddebba1222e74bc6af20ef5b47ee 745 Pfam PF07095 Intracellular growth attenuator protein IgaA 14 733 1.4E-31 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AL504_RS30385 5175ddebba1222e74bc6af20ef5b47ee 745 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 75 677 7.0E-13 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AL504_RS08840 67922f6a2bc20f7aac316faa2c545dcd 142 Pfam PF11681 Protein of unknown function (DUF3277) 27 132 9.6E-10 T 28-03-2018 IPR021695 Bacteriophage rv5, Orf52 AL504_RS00820 28f598ad0be0c200a46a7aa7f5862c1d 204 SUPERFAMILY SSF69118 1 176 4.84E-30 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00820 28f598ad0be0c200a46a7aa7f5862c1d 204 Gene3D G3DSA:1.20.1290.10 13 183 6.3E-27 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL504_RS00820 28f598ad0be0c200a46a7aa7f5862c1d 204 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 107 6.7E-5 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL504_RS01865 fb75afc35afd8dc6d89867c185f81c49 259 Pfam PF11745 Protein of unknown function (DUF3304) 15 86 1.7E-11 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AL504_RS15560 28ad29ad8bd4bc0e7be7754cae212373 212 PIRSF PIRSF006324 1 209 2.1E-53 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS15560 28ad29ad8bd4bc0e7be7754cae212373 212 Pfam PF01810 LysE type translocator 17 206 1.3E-31 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS13680 8529bf5012b4bf97b8a555703e87f298 290 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 31 264 3.4E-50 T 28-03-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related AL504_RS16000 b43bb2b8d2208ec95b3963319b6b12f0 134 Pfam PF01042 Endoribonuclease L-PSP 26 132 1.1E-21 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL504_RS16000 b43bb2b8d2208ec95b3963319b6b12f0 134 Gene3D G3DSA:3.30.1330.40 1 132 4.4E-29 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS16000 b43bb2b8d2208ec95b3963319b6b12f0 134 SUPERFAMILY SSF55298 2 133 1.37E-32 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL504_RS27490 fb80306595f2ccb5f518fc9d823d9cde 313 PIRSF PIRSF018266 2 313 1.1E-82 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL504_RS27490 fb80306595f2ccb5f518fc9d823d9cde 313 Gene3D G3DSA:3.30.530.20 18 241 3.0E-4 T 28-03-2018 IPR023393 START-like domain AL504_RS27490 fb80306595f2ccb5f518fc9d823d9cde 313 Pfam PF04773 FecR protein 106 198 2.4E-17 T 28-03-2018 IPR006860 FecR protein AL504_RS27490 fb80306595f2ccb5f518fc9d823d9cde 313 Pfam PF16220 Domain of unknown function (DUF4880) 9 51 3.7E-10 T 28-03-2018 IPR032623 FecR, N-terminal AL504_RS04180 e0d21d7e5d61da97d175f2747a17f8f9 264 Gene3D G3DSA:1.10.12.10 223 264 8.0E-16 T 28-03-2018 IPR014748 Crontonase, C-terminal AL504_RS04180 e0d21d7e5d61da97d175f2747a17f8f9 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 263 6.8E-49 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL504_RS04180 e0d21d7e5d61da97d175f2747a17f8f9 264 SUPERFAMILY SSF52096 9 263 1.01E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL504_RS04180 e0d21d7e5d61da97d175f2747a17f8f9 264 Gene3D G3DSA:3.90.226.10 12 222 9.5E-58 T 28-03-2018 AL504_RS15650 24a9db90ab0eb7b564d38086bc9f35b7 225 SUPERFAMILY SSF53474 15 224 1.86E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS15650 24a9db90ab0eb7b564d38086bc9f35b7 225 Pfam PF02230 Phospholipase/Carboxylesterase 13 223 6.2E-48 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AL504_RS15650 24a9db90ab0eb7b564d38086bc9f35b7 225 Gene3D G3DSA:3.40.50.1820 6 225 2.5E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS18515 bbfc5a42c34244ba0210ffba36279e54 99 Pfam PF04324 BFD-like [2Fe-2S] binding domain 8 55 1.1E-9 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL504_RS14085 a7d26a8874ad5d123052f8cd3642e23d 378 Pfam PF01266 FAD dependent oxidoreductase 7 364 9.9E-65 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL504_RS14085 a7d26a8874ad5d123052f8cd3642e23d 378 Gene3D G3DSA:3.40.50.720 7 102 3.4E-7 T 28-03-2018 AL504_RS14085 a7d26a8874ad5d123052f8cd3642e23d 378 SUPERFAMILY SSF51905 6 323 5.18E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL504_RS14085 a7d26a8874ad5d123052f8cd3642e23d 378 Gene3D G3DSA:3.30.9.10 103 193 7.5E-19 T 28-03-2018 AL504_RS14085 a7d26a8874ad5d123052f8cd3642e23d 378 Gene3D G3DSA:3.30.9.10 203 323 2.6E-28 T 28-03-2018 AL504_RS05995 8688203995474eb69fb0b1c9f4bf1d4c 273 Gene3D G3DSA:3.40.190.10 105 245 4.7E-9 T 28-03-2018 AL504_RS05995 8688203995474eb69fb0b1c9f4bf1d4c 273 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 2 265 4.5E-64 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL504_RS05995 8688203995474eb69fb0b1c9f4bf1d4c 273 SUPERFAMILY SSF53850 49 234 1.49E-10 T 28-03-2018 AL504_RS29165 c6a7d5134a6c28f6791c332b1703fc82 62 Gene3D G3DSA:1.10.10.620 1 61 1.5E-7 T 28-03-2018 AL504_RS13845 3cd1bff7e2cd17dd53ae05101f6f6dcf 272 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 35 261 3.7E-72 T 28-03-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 AL504_RS13845 3cd1bff7e2cd17dd53ae05101f6f6dcf 272 SUPERFAMILY SSF110710 8 262 3.14E-79 T 28-03-2018 AL504_RS28010 be513433d9f9a04c12377447039937de 388 Pfam PF06250 Protein of unknown function (DUF1016) 25 369 2.8E-108 T 28-03-2018 IPR009362 Protein of unknown function DUF1016 AL504_RS30545 f52677e64aa3396b20e043304ef73c36 64 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 3.4E-20 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 AL504_RS08895 6a0f74c0b000e0a2680f65c54e34885b 426 Pfam PF06381 Protein of unknown function (DUF1073) 29 378 3.6E-80 T 28-03-2018 IPR024459 Protein of unknown function DUF1073 AL504_RS06575 be02ff5b42ec7ff9a41e95f2103dd61c 257 SUPERFAMILY SSF53448 1 255 2.6E-68 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS06575 be02ff5b42ec7ff9a41e95f2103dd61c 257 Gene3D G3DSA:3.90.550.10 1 257 5.5E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS06575 be02ff5b42ec7ff9a41e95f2103dd61c 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 5.2E-141 T 28-03-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 AL504_RS06575 be02ff5b42ec7ff9a41e95f2103dd61c 257 Pfam PF00483 Nucleotidyl transferase 2 200 2.3E-17 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL504_RS09985 4768bc2c9b8a6f3237022cdf3885797e 241 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 20 204 1.3E-33 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL504_RS09985 4768bc2c9b8a6f3237022cdf3885797e 241 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 18 212 23.217 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL504_RS09985 4768bc2c9b8a6f3237022cdf3885797e 241 SUPERFAMILY SSF50486 15 219 7.22E-51 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AL504_RS09985 4768bc2c9b8a6f3237022cdf3885797e 241 Gene3D G3DSA:3.10.300.10 12 216 6.3E-39 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL504_RS02665 0f47af7209201c3631cf30c21c87eb9f 416 Pfam PF05940 NnrS protein 23 393 9.5E-90 T 28-03-2018 IPR010266 NnrS AL504_RS27740 c55696e34d20b33a44f05a70c8885778 284 SUPERFAMILY SSF55486 97 224 1.89E-5 T 28-03-2018 AL504_RS27740 c55696e34d20b33a44f05a70c8885778 284 Pfam PF04228 Putative neutral zinc metallopeptidase 1 279 7.5E-119 T 28-03-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AL504_RS14250 73d365c1ee8e9c686a3c3563b4fd72c8 397 Pfam PF02515 CoA-transferase family III 9 374 3.5E-109 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS14250 73d365c1ee8e9c686a3c3563b4fd72c8 397 Gene3D G3DSA:3.40.50.10540 3 397 1.2E-126 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS14250 73d365c1ee8e9c686a3c3563b4fd72c8 397 SUPERFAMILY SSF89796 3 397 5.62E-125 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS30485 c52418d348a38d2f73520c5a4ff04a75 381 SUPERFAMILY SSF53822 27 373 8.7E-92 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS30485 c52418d348a38d2f73520c5a4ff04a75 381 Pfam PF13458 Periplasmic binding protein 28 369 3.8E-61 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS30485 c52418d348a38d2f73520c5a4ff04a75 381 Gene3D G3DSA:3.40.50.2300 11 191 9.2E-40 T 28-03-2018 AL504_RS30485 c52418d348a38d2f73520c5a4ff04a75 381 Gene3D G3DSA:3.40.50.2300 192 355 5.0E-20 T 28-03-2018 AL504_RS11225 c9a1166d32ba4d14c3403e68ff99d6fb 329 Gene3D G3DSA:1.10.620.20 16 313 4.0E-82 T 28-03-2018 AL504_RS11225 c9a1166d32ba4d14c3403e68ff99d6fb 329 SUPERFAMILY SSF47240 46 289 1.78E-83 T 28-03-2018 IPR009078 Ferritin-like superfamily AL504_RS11225 c9a1166d32ba4d14c3403e68ff99d6fb 329 Pfam PF05138 Phenylacetic acid catabolic protein 36 311 2.8E-105 T 28-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AL504_RS11225 c9a1166d32ba4d14c3403e68ff99d6fb 329 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 26 315 6.6E-166 T 28-03-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.14+1.14.13.149|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176 AL504_RS30470 556919c28e090dfe8e365044c960c021 554 Pfam PF02470 MlaD protein 303 408 3.1E-12 T 28-03-2018 IPR003399 Mce/MlaD AL504_RS30470 556919c28e090dfe8e365044c960c021 554 Pfam PF02470 MlaD protein 54 141 1.6E-10 T 28-03-2018 IPR003399 Mce/MlaD AL504_RS30470 556919c28e090dfe8e365044c960c021 554 Pfam PF02470 MlaD protein 172 232 7.5E-8 T 28-03-2018 IPR003399 Mce/MlaD AL504_RS24980 bbbabede4f3aa11ee37f86ecbf0993aa 71 Pfam PF04102 SlyX 8 71 3.2E-19 T 28-03-2018 IPR007236 SlyX AL504_RS24980 bbbabede4f3aa11ee37f86ecbf0993aa 71 Gene3D G3DSA:1.20.5.300 5 51 3.6E-14 T 28-03-2018 AL504_RS10045 ca7ee5e0b8eed834e584dfb9fbb2e3fd 96 Pfam PF12112 Protein of unknown function (DUF3579) 5 93 2.0E-37 T 28-03-2018 IPR021969 Protein of unknown function DUF3579 AL504_RS17775 15fa818994a98c2a13ccf832b750b670 201 Gene3D G3DSA:3.40.30.10 23 201 4.9E-37 T 28-03-2018 AL504_RS17775 15fa818994a98c2a13ccf832b750b670 201 SUPERFAMILY SSF52833 45 200 2.88E-52 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS17775 15fa818994a98c2a13ccf832b750b670 201 Pfam PF02630 SCO1/SenC 41 177 1.5E-45 T 28-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL504_RS15145 2add055fe487b40b1e1913bb95d8b35c 131 Pfam PF04138 GtrA-like protein 11 125 7.5E-15 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AL504_RS04970 9e119538a174509287b449db6a4dd362 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 154 6.3E-24 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS21955 fd69290abd5738e20f72de97f36716a7 426 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 305 1.1E-26 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS21955 fd69290abd5738e20f72de97f36716a7 426 Gene3D G3DSA:1.10.3470.10 22 318 4.4E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS01805 26250b6decc82b57baed37106488684b 81 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 68 2.6E-26 T 28-03-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system AL504_RS01490 7c5f87b2f0e811c6778ed9aae6596794 170 Gene3D G3DSA:3.40.50.300 10 168 2.7E-18 T 28-03-2018 AL504_RS01490 7c5f87b2f0e811c6778ed9aae6596794 170 Pfam PF13671 AAA domain 16 157 2.9E-26 T 28-03-2018 AL504_RS01490 7c5f87b2f0e811c6778ed9aae6596794 170 SUPERFAMILY SSF52540 14 136 1.07E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS31355 f2b8775577a50dba1bec179f3ff23839 134 Pfam PF07233 Protein of unknown function (DUF1425) 48 128 4.8E-18 T 28-03-2018 IPR010824 Protein of unknown function DUF1425 AL504_RS19645 6d52ff7670122ccc96ccb062e81c2b77 131 Gene3D G3DSA:1.25.40.10 25 115 8.1E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS00890 938a65e46234a34ae7b6007c5617f001 147 Pfam PF05117 Family of unknown function (DUF695) 10 133 8.3E-25 T 28-03-2018 IPR016097 Domain of unknown function DUF695 AL504_RS10200 d80ca246246dcc29bdebea8a94325ece 302 SUPERFAMILY SSF103481 44 146 6.02E-13 T 28-03-2018 AL504_RS10200 d80ca246246dcc29bdebea8a94325ece 302 Pfam PF00892 EamA-like transporter family 18 143 8.8E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS10200 d80ca246246dcc29bdebea8a94325ece 302 Pfam PF00892 EamA-like transporter family 155 289 4.4E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS10200 d80ca246246dcc29bdebea8a94325ece 302 SUPERFAMILY SSF103481 194 293 4.45E-13 T 28-03-2018 AL504_RS20945 cf58af038e91c73aabc8c6bb7e0515dd 163 SUPERFAMILY SSF110087 6 148 6.15E-47 T 28-03-2018 IPR007410 Copper chaperone PCuAC AL504_RS20945 cf58af038e91c73aabc8c6bb7e0515dd 163 Pfam PF04314 Copper chaperone PCu(A)C 32 141 2.6E-41 T 28-03-2018 IPR007410 Copper chaperone PCuAC AL504_RS28275 2e6777007077a203288d44d11eac0717 208 Pfam PF05995 Cysteine dioxygenase type I 77 158 8.5E-7 T 28-03-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 AL504_RS28275 2e6777007077a203288d44d11eac0717 208 SUPERFAMILY SSF51182 10 195 4.05E-51 T 28-03-2018 IPR011051 RmlC-like cupin domain AL504_RS28275 2e6777007077a203288d44d11eac0717 208 Gene3D G3DSA:2.60.120.10 3 191 3.4E-31 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL504_RS09655 dc15145dc187b40ec3b8fc2675ae41f5 425 Pfam PF03237 Terminase-like family 21 235 6.9E-42 T 28-03-2018 AL504_RS09655 dc15145dc187b40ec3b8fc2675ae41f5 425 Pfam PF17289 Terminase RNaseH-like domain 253 408 5.4E-22 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like AL504_RS20145 3d6b861bfb73b1ccd3571c29ca6e725f 101 Pfam PF13663 Domain of unknown function (DUF4148) 1 60 3.5E-12 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS20145 3d6b861bfb73b1ccd3571c29ca6e725f 101 Pfam PF13663 Domain of unknown function (DUF4148) 61 97 3.7E-10 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS20660 6f7adcfdaa30f0336e535b20dc4b3a2a 78 Pfam PF06945 Protein of unknown function (DUF1289) 26 70 7.6E-18 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 SUPERFAMILY SSF69360 65 117 1.96E-5 T 28-03-2018 AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 SUPERFAMILY SSF69360 211 224 1.96E-5 T 28-03-2018 AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 Pfam PF14903 WG containing repeat 102 134 1.4E-7 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 Pfam PF14903 WG containing repeat 558 586 0.0084 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 Pfam PF14903 WG containing repeat 68 102 4.5E-11 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 Pfam PF14903 WG containing repeat 671 703 0.0017 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 Pfam PF14903 WG containing repeat 937 967 3.1E-6 T 28-03-2018 IPR032774 WG containing repeat AL504_RS22075 57019ab95b66bc4868c9aa9298f8462d 1028 Gene3D G3DSA:2.10.270.10 27 158 0.15 T 28-03-2018 AL504_RS30930 b2fcc295120d4b64483df1e421917dcd 499 Pfam PF05136 Phage portal protein, lambda family 32 376 6.8E-105 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AL504_RS30930 b2fcc295120d4b64483df1e421917dcd 499 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 30 482 1.3E-88 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AL504_RS18505 be2309292f362c59d64229fe272f00c7 304 SUPERFAMILY SSF103481 202 302 2.48E-10 T 28-03-2018 AL504_RS18505 be2309292f362c59d64229fe272f00c7 304 SUPERFAMILY SSF103481 54 156 1.83E-15 T 28-03-2018 AL504_RS18505 be2309292f362c59d64229fe272f00c7 304 Pfam PF00892 EamA-like transporter family 25 153 4.8E-26 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS18505 be2309292f362c59d64229fe272f00c7 304 Pfam PF00892 EamA-like transporter family 167 299 4.0E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS30475 3adf710077e59d2d51e6717f233f01d2 229 Gene3D G3DSA:3.40.50.10610 28 218 8.7E-45 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AL504_RS30475 3adf710077e59d2d51e6717f233f01d2 229 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 201 6.3E-40 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AL504_RS30475 3adf710077e59d2d51e6717f233f01d2 229 SUPERFAMILY SSF159594 38 208 1.96E-32 T 28-03-2018 AL504_RS12040 98d9f0318d690dd2414321c9e146257a 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 356 1.3E-51 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL504_RS12040 98d9f0318d690dd2414321c9e146257a 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 3 355 1.1E-98 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AL504_RS23770 c0867d6f27b5aa9012ccf3dc54316ad9 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 255 269 4.8E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL504_RS23770 c0867d6f27b5aa9012ccf3dc54316ad9 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 79 99 4.8E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL504_RS23770 c0867d6f27b5aa9012ccf3dc54316ad9 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 212 233 4.8E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL504_RS23770 c0867d6f27b5aa9012ccf3dc54316ad9 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 117 146 4.8E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL504_RS23770 c0867d6f27b5aa9012ccf3dc54316ad9 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 34 54 4.8E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL504_RS23770 c0867d6f27b5aa9012ccf3dc54316ad9 310 Pfam PF00487 Fatty acid desaturase 60 279 3.2E-25 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AL504_RS20930 04f219566dd72415061cd5c9cb34c44b 121 Pfam PF03992 Antibiotic biosynthesis monooxygenase 26 91 2.1E-6 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL504_RS20930 04f219566dd72415061cd5c9cb34c44b 121 SUPERFAMILY SSF54909 14 113 1.22E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS20930 04f219566dd72415061cd5c9cb34c44b 121 Gene3D G3DSA:3.30.70.100 16 108 1.9E-17 T 28-03-2018 AL504_RS07475 6413d20e092e8f469dcdcbf0c81575d8 105 Pfam PF03927 NapD protein 16 90 1.2E-27 T 28-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 Gene3D G3DSA:3.40.50.720 1 264 3.3E-67 T 28-03-2018 AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 SUPERFAMILY SSF51735 6 260 9.37E-72 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.0E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.0E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.0E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.0E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 259 9.7E-46 T 28-03-2018 AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.5E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.5E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS27865 f68d7e4c1ab3ecfa5c2daa2735043567 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.5E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL504_RS30920 6d835a80a115ccca971291aee8e474f0 664 Pfam PF05876 Phage terminase large subunit (GpA) 12 592 1.3E-149 T 28-03-2018 IPR008866 Bacteriophage lambda, GpA AL504_RS14655 e26bc1fa548260c8fd05b71f98e1d383 136 Pfam PF03061 Thioesterase superfamily 32 107 9.2E-17 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL504_RS14655 e26bc1fa548260c8fd05b71f98e1d383 136 Gene3D G3DSA:3.10.129.10 2 136 1.3E-30 T 28-03-2018 AL504_RS14655 e26bc1fa548260c8fd05b71f98e1d383 136 SUPERFAMILY SSF54637 18 134 1.5E-33 T 28-03-2018 IPR029069 HotDog domain AL504_RS15075 b8e98871f4850a24fcb477d05023b300 230 Pfam PF04172 LrgB-like family 14 225 1.1E-65 T 28-03-2018 IPR007300 CidB/LrgB family AL504_RS30965 a9eb1483810048f27c455372f94a6fd4 191 Pfam PF08809 Phage related hypothetical protein (DUF1799) 112 185 3.2E-7 T 28-03-2018 IPR014915 Bacteriophage TLS, TfmB AL504_RS20535 6d6d37115a70cfee35ae402fb871a4b9 101 Pfam PF11604 Copper binding periplasmic protein CusF 36 100 2.9E-24 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF AL504_RS13660 d5560455b97d5d9b4d00e9bb2c3032ab 140 Gene3D G3DSA:3.10.450.50 6 132 2.4E-19 T 28-03-2018 AL504_RS13660 d5560455b97d5d9b4d00e9bb2c3032ab 140 Pfam PF13474 SnoaL-like domain 10 124 1.9E-15 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL504_RS13660 d5560455b97d5d9b4d00e9bb2c3032ab 140 SUPERFAMILY SSF54427 2 123 3.6E-32 T 28-03-2018 IPR032710 NTF2-like domain AL504_RS11870 47354f72298164c1bfceb8d05d98a579 94 Pfam PF07045 Domain of unknown function (DUF1330) 2 94 6.6E-33 T 28-03-2018 IPR010753 Domain of unknown function DUF1330 AL504_RS11870 47354f72298164c1bfceb8d05d98a579 94 SUPERFAMILY SSF54909 1 94 3.16E-26 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL504_RS11870 47354f72298164c1bfceb8d05d98a579 94 Gene3D G3DSA:3.30.70.100 1 94 2.2E-26 T 28-03-2018 AL504_RS13545 da74f535e054ec437926d00130082e4b 196 Pfam PF11161 Protein of unknown function (DUF2946) 1 195 8.7E-60 T 28-03-2018 IPR021332 Protein of unknown function DUF2944 AL504_RS30540 1636b47774ae6b0bcad2d09cfdec8364 688 Pfam PF04632 Fusaric acid resistance protein family 14 675 6.8E-132 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AL504_RS18340 0798fb583490e2f5a2c1fea3a71f2993 127 Pfam PF04956 TrbC/VIRB2 family 26 117 2.6E-26 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AL504_RS23295 a8e648c0d0ae9a03815cd1862457fdf7 259 Pfam PF02517 CAAX protease self-immunity 96 241 3.4E-8 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AL504_RS11735 a077f17a5b95a6827bf1d37637825e30 150 Pfam PF09980 Predicted membrane protein (DUF2214) 4 149 4.5E-54 T 28-03-2018 IPR018706 Protein of unknown function DUF2214, membrane AL504_RS01355 e75448cefb5f6c80297c7c74dd076d41 261 Gene3D G3DSA:2.60.40.10 142 210 0.0031 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS24735 cd204d736a9e272f1c87942cd1b73cbe 209 Pfam PF14300 Domain of unknown function (DUF4375) 97 209 8.4E-19 T 28-03-2018 IPR025402 Domain of unknown function DUF4375 AL504_RS24735 cd204d736a9e272f1c87942cd1b73cbe 209 Pfam PF10387 Protein of unknown function (DUF2442) 14 71 5.2E-6 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 AL504_RS10930 41591f13bb4f1534c38f20268c5c90a1 336 Pfam PF01757 Acyltransferase family 9 327 1.1E-31 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL504_RS19905 2885234874283e579d4419b53644baba 336 Gene3D G3DSA:1.10.3470.10 33 326 2.2E-35 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS19905 2885234874283e579d4419b53644baba 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 322 1.5E-35 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS03465 d16498beb6a772a8ca091db80c078af2 295 Pfam PF05425 Copper resistance protein D 189 289 5.0E-21 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 AL504_RS03280 07a06e780ecfb2f0ec376d61f1b2e866 315 Gene3D G3DSA:1.10.3470.10 1 314 2.1E-57 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS03280 07a06e780ecfb2f0ec376d61f1b2e866 315 SUPERFAMILY SSF81345 2 307 7.06E-70 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL504_RS03280 07a06e780ecfb2f0ec376d61f1b2e866 315 Pfam PF01032 FecCD transport family 2 307 3.2E-82 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL504_RS30650 54d2f81d89a203c0c3a3f3399af6ebf0 309 Pfam PF06675 Protein of unknown function (DUF1177) 38 302 2.0E-116 T 28-03-2018 IPR009561 Protein of unknown function DUF1177 AL504_RS02340 308074ed50eb7a9cd28fb6e3a7c3ac78 400 Pfam PF07394 Protein of unknown function (DUF1501) 32 380 3.8E-41 T 28-03-2018 IPR010869 Protein of unknown function DUF1501 AL504_RS06100 5b4e3fc49a283886d5a0d4b2af124868 159 Pfam PF11008 Protein of unknown function (DUF2846) 19 119 2.4E-9 T 28-03-2018 IPR022548 Domain of unknown function DUF2846 AL504_RS10040 c94078246563f1bfa931fcf5197ad40b 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 416 2.9E-131 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS10040 c94078246563f1bfa931fcf5197ad40b 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 413 2.2E-116 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS10040 c94078246563f1bfa931fcf5197ad40b 425 PIRSF PIRSF006066 1 425 7.2E-164 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS26950 a56408fe631ac8fbe6636ce35f45b087 303 SUPERFAMILY SSF51735 8 130 2.06E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS26950 a56408fe631ac8fbe6636ce35f45b087 303 SUPERFAMILY SSF51735 165 215 2.06E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS26950 a56408fe631ac8fbe6636ce35f45b087 303 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 197 2.5E-19 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS26950 a56408fe631ac8fbe6636ce35f45b087 303 Gene3D G3DSA:3.40.50.720 8 292 7.7E-26 T 28-03-2018 AL504_RS04395 659afb0985f762088037a207b27c1179 237 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 139 219 1.4E-13 T 28-03-2018 IPR016772 Uncharacterised conserved protein UCP020408 AL504_RS17175 bed06bd7561d4f2862045f99472af9b7 687 Gene3D G3DSA:3.40.720.10 288 587 4.0E-20 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL504_RS17175 bed06bd7561d4f2862045f99472af9b7 687 Pfam PF00884 Sulfatase 296 534 7.8E-15 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL504_RS17175 bed06bd7561d4f2862045f99472af9b7 687 SUPERFAMILY SSF53649 295 620 8.34E-22 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL504_RS29190 2204889e06445f603eeb67cab9d29579 385 Pfam PF13644 DKNYY family 203 322 9.1E-13 T 28-03-2018 IPR027375 DKNYY family AL504_RS27095 7128f99d76e470efc3ac12089c224277 201 Pfam PF13590 Domain of unknown function (DUF4136) 25 183 6.9E-35 T 28-03-2018 IPR025411 Domain of unknown function DUF4136 AL504_RS01860 269f2db1ed4d9a005f71ac0193c4c658 321 Pfam PF13503 Domain of unknown function (DUF4123) 29 164 3.5E-11 T 28-03-2018 IPR025391 Domain of unknown function DUF4123 AL504_RS20300 16e5fff7fba8265bbf7c54e2b855e0d1 354 Pfam PF00953 Glycosyl transferase family 4 77 232 3.4E-31 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL504_RS01900 478460f10c31833bd88a32eb040c99de 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 4.8E-139 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AL504_RS01900 478460f10c31833bd88a32eb040c99de 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 447 5.6E-142 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AL504_RS01895 c3a46979e9bf2ad884208aa17df7c0b1 259 Pfam PF09850 Type VI secretion system protein DotU 30 227 2.3E-59 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AL504_RS01895 c3a46979e9bf2ad884208aa17df7c0b1 259 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 29 233 1.1E-60 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AL504_RS29705 db21122b04154f5e313021acb0180352 313 Pfam PF06675 Protein of unknown function (DUF1177) 39 307 1.9E-138 T 28-03-2018 IPR009561 Protein of unknown function DUF1177 AL504_RS25885 e6db9e36dff44c997715e054c56ba148 179 Gene3D G3DSA:3.30.530.20 4 179 3.7E-33 T 28-03-2018 IPR023393 START-like domain AL504_RS25885 e6db9e36dff44c997715e054c56ba148 179 SUPERFAMILY SSF55961 3 175 1.42E-44 T 28-03-2018 AL504_RS25885 e6db9e36dff44c997715e054c56ba148 179 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 22 153 7.5E-18 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AL504_RS05345 623f95ef4cc803d5d1f9970020939dac 227 Pfam PF04367 Protein of unknown function (DUF502) 56 160 7.9E-24 T 28-03-2018 IPR007462 Protein of unknown function DUF502 AL504_RS13150 da4ae17a71a7011bf324b95821bb7f5b 740 Pfam PF13515 Fusaric acid resistance protein-like 421 543 2.4E-16 T 28-03-2018 AL504_RS13150 da4ae17a71a7011bf324b95821bb7f5b 740 Pfam PF12805 FUSC-like inner membrane protein yccS 72 352 5.3E-70 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AL504_RS08155 91b12a636d2ab5855996c96af48b489c 126 SUPERFAMILY SSF50022 9 115 8.51E-22 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS08155 91b12a636d2ab5855996c96af48b489c 126 Gene3D G3DSA:2.102.10.10 3 125 3.5E-18 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS08155 91b12a636d2ab5855996c96af48b489c 126 Pfam PF00355 Rieske [2Fe-2S] domain 11 98 1.6E-7 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL504_RS00130 a83024bd0bb815df89a9ace358f7893c 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 95 1.5E-16 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL504_RS13365 e6bb00058f52b480776ca0cc659625fc 423 Pfam PF04932 O-Antigen ligase 191 341 8.5E-24 T 28-03-2018 IPR007016 O-antigen ligase-related AL504_RS13205 eb3611c74692f284eedf4ba38af1933a 167 Gene3D G3DSA:2.30.130.30 1 162 2.3E-26 T 28-03-2018 AL504_RS13205 eb3611c74692f284eedf4ba38af1933a 167 Pfam PF04266 ASCH domain 6 116 2.5E-5 T 28-03-2018 IPR007374 ASCH domain AL504_RS28670 aa212baaef0b68add059134792caf689 152 PIRSF PIRSF032131 3 150 2.4E-46 T 28-03-2018 IPR009562 Protein of unknown function DUF1178 AL504_RS28670 aa212baaef0b68add059134792caf689 152 Pfam PF06676 Protein of unknown function (DUF1178) 4 144 7.1E-51 T 28-03-2018 IPR009562 Protein of unknown function DUF1178 AL504_RS08400 83f5e30d6764a97b131e0e0d314bf9da 133 SUPERFAMILY SSF53062 1 132 1.83E-25 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL504_RS08400 83f5e30d6764a97b131e0e0d314bf9da 133 Pfam PF03610 PTS system fructose IIA component 4 117 1.1E-16 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL504_RS08400 83f5e30d6764a97b131e0e0d314bf9da 133 Gene3D G3DSA:3.40.50.510 2 133 2.1E-28 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL504_RS00300 d0e4c04103b31c24caadcac9223ff2ff 165 Pfam PF14316 Domain of unknown function (DUF4381) 9 159 4.2E-29 T 28-03-2018 IPR025489 Protein of unknown function (DUF4381 AL504_RS02205 e7cc62bd2323f2f77204b7dfa2bc74cf 287 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 221 4.2E-19 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL504_RS29955 88aeb83b0c266cb6f3daa38734959930 65 Pfam PF09791 Oxidoreductase-like protein, N-terminal 20 58 4.9E-14 T 28-03-2018 IPR019180 Oxidoreductase-like, N-terminal AL504_RS17555 095fc8acaee317c55abcaad1b9d2a4a3 417 SUPERFAMILY SSF56954 3 416 9.81E-78 T 28-03-2018 AL504_RS17555 095fc8acaee317c55abcaad1b9d2a4a3 417 Pfam PF02321 Outer membrane efflux protein 245 416 6.9E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS17555 095fc8acaee317c55abcaad1b9d2a4a3 417 Pfam PF02321 Outer membrane efflux protein 43 217 2.1E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL504_RS17555 095fc8acaee317c55abcaad1b9d2a4a3 417 Gene3D G3DSA:1.20.1600.10 4 417 1.3E-68 T 28-03-2018 AL504_RS28440 8253bf6470bc697d6588fc5f73820727 438 Pfam PF01943 Polysaccharide biosynthesis protein 15 291 2.0E-16 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL504_RS04310 1ec552935f516b72e9d0b77fd7e1853c 112 Pfam PF05957 Bacterial protein of unknown function (DUF883) 32 111 1.0E-19 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AL504_RS13555 bf1712002d320328d2e641db1bbfae21 133 Pfam PF07681 DoxX 11 87 9.1E-18 T 28-03-2018 IPR032808 DoxX family AL504_RS18880 1ee4bcc52542b3743163561fb79f2530 213 Pfam PF14487 Domain of unknown function (DUF4433) 17 209 3.9E-25 T 28-03-2018 IPR029494 Domain of unknown function DUF4433 AL504_RS07800 77d8bfb6d238b87acb7c1c3300606c8a 207 PIRSF PIRSF006324 1 206 9.3E-52 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS07800 77d8bfb6d238b87acb7c1c3300606c8a 207 Pfam PF01810 LysE type translocator 15 202 5.2E-29 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS12520 057a90ebfc4d1d5359a6d05e5b923619 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 102 21.039 T 28-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AL504_RS12520 057a90ebfc4d1d5359a6d05e5b923619 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 98 6.9E-25 T 28-03-2018 AL504_RS30435 722a58e6762bb5610e8eaca32ee67c94 172 Pfam PF02643 Uncharacterized ACR, COG1430 67 168 3.2E-32 T 28-03-2018 IPR003795 Protein of unknown function DUF192 AL504_RS26330 898a2cf3f813b4f9efe2edd718230996 429 Pfam PF02515 CoA-transferase family III 4 391 1.4E-113 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 AL504_RS26330 898a2cf3f813b4f9efe2edd718230996 429 Gene3D G3DSA:3.40.50.10540 1 424 2.6E-133 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS26330 898a2cf3f813b4f9efe2edd718230996 429 SUPERFAMILY SSF89796 2 414 5.89E-122 T 28-03-2018 IPR023606 CoA-transferase family III domain AL504_RS11575 d94694c79f41bbe7dcc873fbd6b522ca 282 Pfam PF03239 Iron permease FTR1 family 3 263 2.9E-22 T 28-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 AL504_RS11675 4a69a8d4bc47d0b31769d7db4b7599f8 363 Pfam PF03969 AFG1-like ATPase 3 355 1.8E-128 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AL504_RS11675 4a69a8d4bc47d0b31769d7db4b7599f8 363 Gene3D G3DSA:3.40.50.300 18 285 8.7E-15 T 28-03-2018 AL504_RS11675 4a69a8d4bc47d0b31769d7db4b7599f8 363 SUPERFAMILY SSF52540 45 193 6.62E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL504_RS04740 b80c611d9b590b32b87731e38d1c97d0 452 Gene3D G3DSA:3.40.50.2300 95 227 2.1E-5 T 28-03-2018 AL504_RS04740 b80c611d9b590b32b87731e38d1c97d0 452 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 8 351 3.8E-120 T 28-03-2018 IPR010839 Acyclic terpene utilisation AL504_RS09020 d16861a09f1f82b11ae17d665ee60efb 76 Pfam PF13986 Domain of unknown function (DUF4224) 3 46 2.1E-16 T 28-03-2018 IPR025319 Domain of unknown function DUF4224 AL504_RS24845 829bfa16df94dc56e205da14ff918463 172 PRINTS PR01837 MgtC/SapB protein signature 81 103 6.6E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS24845 829bfa16df94dc56e205da14ff918463 172 PRINTS PR01837 MgtC/SapB protein signature 35 54 6.6E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS24845 829bfa16df94dc56e205da14ff918463 172 PRINTS PR01837 MgtC/SapB protein signature 110 134 6.6E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS24845 829bfa16df94dc56e205da14ff918463 172 PRINTS PR01837 MgtC/SapB protein signature 54 72 6.6E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS24845 829bfa16df94dc56e205da14ff918463 172 Pfam PF02308 MgtC family 32 156 1.6E-38 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL504_RS08975 b561d732fe8654df215a9bfa9a5c5bef 125 Gene3D G3DSA:1.10.260.40 4 87 1.1E-5 T 28-03-2018 AL504_RS24700 0e1e975450662e97eeefc5af6b2bb45e 332 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 16 321 2.6E-122 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AL504_RS24700 0e1e975450662e97eeefc5af6b2bb45e 332 Pfam PF03741 Integral membrane protein TerC family 82 289 5.5E-55 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL504_RS02810 4669bf547aeae6266eed11829818b322 151 Pfam PF00583 Acetyltransferase (GNAT) family 28 123 1.1E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS02810 4669bf547aeae6266eed11829818b322 151 SUPERFAMILY SSF55729 3 133 1.74E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS02810 4669bf547aeae6266eed11829818b322 151 Gene3D G3DSA:3.40.630.30 1 136 2.1E-25 T 28-03-2018 AL504_RS25720 19a2b40317307db56a8925f8e7315dfe 272 Pfam PF01464 Transglycosylase SLT domain 157 239 2.4E-13 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL504_RS25720 19a2b40317307db56a8925f8e7315dfe 272 SUPERFAMILY SSF53955 140 256 7.19E-24 T 28-03-2018 IPR023346 Lysozyme-like domain AL504_RS25720 19a2b40317307db56a8925f8e7315dfe 272 Gene3D G3DSA:1.10.530.10 97 263 4.8E-22 T 28-03-2018 AL504_RS25360 07b4a4abd3d61d9bffeedf9a8a00f6ee 115 Pfam PF03413 Peptidase propeptide and YPEB domain 52 104 1.7E-8 T 28-03-2018 IPR025711 PepSY domain AL504_RS25360 07b4a4abd3d61d9bffeedf9a8a00f6ee 115 Gene3D G3DSA:3.10.450.40 33 104 1.3E-9 T 28-03-2018 AL504_RS28220 82696692cdc3daede4305d3e3fcf4066 83 Pfam PF11278 Protein of unknown function (DUF3079) 1 50 2.5E-34 T 28-03-2018 IPR021430 Protein of unknown function DUF3079 AL504_RS15485 f605bed0ef4652c89a8fb45b5e0ed1f3 216 SUPERFAMILY SSF52833 4 214 4.71E-51 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS15485 f605bed0ef4652c89a8fb45b5e0ed1f3 216 Gene3D G3DSA:3.40.30.10 3 211 2.7E-53 T 28-03-2018 AL504_RS15485 f605bed0ef4652c89a8fb45b5e0ed1f3 216 Pfam PF01323 DSBA-like thioredoxin domain 5 209 1.2E-38 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL504_RS02740 607d97525d45ce37813bdd3c8c65d859 144 Gene3D G3DSA:3.30.1050.10 2 135 3.1E-12 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL504_RS02740 607d97525d45ce37813bdd3c8c65d859 144 Pfam PF02036 SCP-2 sterol transfer family 46 126 1.1E-9 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL504_RS02740 607d97525d45ce37813bdd3c8c65d859 144 SUPERFAMILY SSF55718 32 133 3.53E-16 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL504_RS00585 c1d91af66c1cf8936d5cea84276b0ff9 186 Pfam PF07209 Protein of unknown function (DUF1415) 11 179 1.6E-70 T 28-03-2018 IPR009858 Protein of unknown function DUF1415 AL504_RS21660 d14bfd179e72c9fc6a0f543d9c55d5de 357 Gene3D G3DSA:1.25.40.10 5 324 1.1E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL504_RS28605 7d135a19d88a3dc49169c1be1f34be39 180 Pfam PF07811 TadE-like protein 24 66 5.6E-9 T 28-03-2018 IPR012495 TadE-like AL504_RS30990 52668dddb213a4bf1329a3fd4e580766 242 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 239 3.0E-84 T 28-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AL504_RS30990 52668dddb213a4bf1329a3fd4e580766 242 Pfam PF05100 Phage minor tail protein L 25 239 5.7E-69 T 28-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AL504_RS30700 3243ac739290479a76a12bcaaace2ec1 402 Pfam PF00487 Fatty acid desaturase 17 219 9.3E-12 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AL504_RS30700 3243ac739290479a76a12bcaaace2ec1 402 Pfam PF01610 Transposase 291 401 2.7E-8 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AL504_RS01905 df54b5a703a2f58916b9853008e2a109 205 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 23 173 2.6E-29 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL504_RS01905 df54b5a703a2f58916b9853008e2a109 205 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 15 177 1.1E-28 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL504_RS05855 a5254d9ae68d257631a4ebcd05d3bbb8 274 Gene3D G3DSA:1.20.5.170 186 264 2.2E-4 T 28-03-2018 AL504_RS23340 4100d2fa0eff949fbeed5e3fa989553c 833 Pfam PF05170 AsmA family 1 722 3.9E-62 T 28-03-2018 IPR007844 AsmA AL504_RS17785 a498a6f0be23cab5b04574644a96eb2b 344 Pfam PF02628 Cytochrome oxidase assembly protein 10 320 5.0E-80 T 28-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AL504_RS00355 04249346f917505ef0bb259cf3cf2fca 117 Pfam PF02656 Domain of unknown function (DUF202) 18 77 1.9E-11 T 28-03-2018 IPR003807 Domain of unknown function DUF202 AL504_RS22110 8f6f0347d13fd72d2a4c952cd8cadf6f 79 Pfam PF12167 Arm DNA-binding domain 6 67 6.8E-17 T 28-03-2018 IPR022000 Min27-like integrase, DNA-binding domain AL504_RS12645 9826a5004d70980e06aa713eeb604533 220 Gene3D G3DSA:1.10.10.10 12 155 3.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12645 9826a5004d70980e06aa713eeb604533 220 SUPERFAMILY SSF46785 20 197 5.96E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL504_RS12645 9826a5004d70980e06aa713eeb604533 220 ProSitePatterns PS00261 Glycoprotein hormones beta chain signature 1. 178 184 - T 28-03-2018 IPR018245 Gonadotropin, beta subunit, conserved site GO:0005179|GO:0005576 AL504_RS04530 81fb387f29c2e25d634f92b0c829846a 125 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.1E-27 T 28-03-2018 IPR006696 Protein of unknown function DUF423 AL504_RS03195 c1c20a26322808e1684f7dda1eaaf08b 246 Pfam PF00975 Thioesterase domain 8 231 2.5E-37 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AL504_RS03195 c1c20a26322808e1684f7dda1eaaf08b 246 Gene3D G3DSA:3.40.50.1820 4 234 7.3E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS03195 c1c20a26322808e1684f7dda1eaaf08b 246 SUPERFAMILY SSF53474 6 229 3.46E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL504_RS05025 99e16c2d24ec38802944b88f31640412 227 Pfam PF11010 Protein of unknown function (DUF2848) 25 218 2.8E-79 T 28-03-2018 IPR021269 Protein of unknown function DUF2848 AL504_RS12525 4767415c2555dee1a4eed3a218eb87f2 213 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 162 4.2E-32 T 28-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL504_RS25235 58e2f239edf0a6ba7abc597a6f3f6537 511 Pfam PF03929 PepSY-associated TM region 27 504 2.5E-17 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS10335 e3415c84847abd0832b8385a484ac5c1 221 Pfam PF11041 Protein of unknown function (DUF2612) 7 187 1.6E-58 T 28-03-2018 IPR021283 Protein of unknown function DUF2612 AL504_RS01505 36c4cbe55bb6f6e61b5e1854138e9943 134 SUPERFAMILY SSF46458 5 116 2.4E-25 T 28-03-2018 IPR009050 Globin-like AL504_RS01505 36c4cbe55bb6f6e61b5e1854138e9943 134 Gene3D G3DSA:1.10.490.10 4 119 7.0E-23 T 28-03-2018 AL504_RS13095 aae1c66c7048abd8681aa31bb4b4dc06 210 Pfam PF13470 PIN domain 11 109 4.9E-16 T 28-03-2018 IPR002716 PIN domain AL504_RS08000 8455644795778bab234d2d5dfbc81b90 250 Pfam PF00535 Glycosyl transferase family 2 7 132 1.9E-15 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL504_RS08000 8455644795778bab234d2d5dfbc81b90 250 Gene3D G3DSA:3.90.550.10 2 246 1.5E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS08000 8455644795778bab234d2d5dfbc81b90 250 SUPERFAMILY SSF53448 5 232 7.13E-29 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL504_RS20275 1b2523978ef802ace69e187ebee6e934 189 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 9 140 9.4E-32 T 28-03-2018 IPR010419 Carbon monoxide dehydrogenase subunit G AL504_RS20275 1b2523978ef802ace69e187ebee6e934 189 SUPERFAMILY SSF55961 1 145 2.68E-30 T 28-03-2018 AL504_RS20275 1b2523978ef802ace69e187ebee6e934 189 Gene3D G3DSA:3.30.530.20 1 154 4.2E-17 T 28-03-2018 IPR023393 START-like domain AL504_RS10390 0e749c4b59feab5317f4dd75704dd4d9 491 Pfam PF11863 Protein of unknown function (DUF3383) 7 489 3.1E-192 T 28-03-2018 IPR021808 Protein of unknown function DUF3383 AL504_RS16080 000266313f9e72471da654d7754c57db 387 Pfam PF13458 Periplasmic binding protein 22 358 7.1E-68 T 28-03-2018 IPR028081 Leucine-binding protein domain AL504_RS16080 000266313f9e72471da654d7754c57db 387 SUPERFAMILY SSF53822 22 385 2.59E-83 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL504_RS16080 000266313f9e72471da654d7754c57db 387 Gene3D G3DSA:3.40.50.2300 19 188 9.2E-26 T 28-03-2018 AL504_RS16080 000266313f9e72471da654d7754c57db 387 Gene3D G3DSA:3.40.50.2300 189 349 8.3E-23 T 28-03-2018 AL504_RS01875 317db7b09298ac4ccd9907c07c96eb0f 259 Pfam PF11745 Protein of unknown function (DUF3304) 15 134 2.2E-11 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AL504_RS17935 0aafa929957f308ba7b4ef11e1b7c376 355 Pfam PF03060 Nitronate monooxygenase 3 343 4.7E-83 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL504_RS17935 0aafa929957f308ba7b4ef11e1b7c376 355 SUPERFAMILY SSF51412 2 348 1.24E-62 T 28-03-2018 AL504_RS17935 0aafa929957f308ba7b4ef11e1b7c376 355 Gene3D G3DSA:3.20.20.70 1 355 3.5E-51 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL504_RS25045 fcbf89dbb343e34a830a814a2d8efa6b 142 Pfam PF11162 Protein of unknown function (DUF2946) 21 139 6.7E-10 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 AL504_RS28025 85bb243c094eeb786ace3190de5bcbe6 276 Pfam PF12679 ABC-2 family transporter protein 6 274 2.4E-50 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 AL504_RS13440 cb9f61db86f5f2f2b2a296099f4cd252 134 Gene3D G3DSA:3.40.30.10 15 134 1.2E-9 T 28-03-2018 AL504_RS13440 cb9f61db86f5f2f2b2a296099f4cd252 134 SUPERFAMILY SSF52833 9 128 5.87E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold AL504_RS25595 5b7bd14f84bc3386faf2be5279e45587 225 Gene3D G3DSA:3.10.180.10 1 147 2.3E-11 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS25595 5b7bd14f84bc3386faf2be5279e45587 225 Pfam PF13468 Glyoxalase-like domain 5 192 4.3E-39 T 28-03-2018 IPR025870 Glyoxalase-like domain AL504_RS25595 5b7bd14f84bc3386faf2be5279e45587 225 SUPERFAMILY SSF54593 1 112 5.33E-6 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL504_RS26135 a0b79f00b600f999cc6f82df98125fee 156 Pfam PF16155 Domain of unknown function (DUF4863) 11 153 7.1E-57 T 28-03-2018 IPR032345 Protein of unknown function DUF4863 AL504_RS10140 9b6f4b0db44ba13e200dc5b421703100 327 Pfam PF01618 MotA/TolQ/ExbB proton channel family 168 285 3.8E-34 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL504_RS07075 0aae0602e1617945b911c670972c2f96 459 Pfam PF07007 Lysozyme inhibitor LprI 25 99 1.2E-6 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AL504_RS25030 44f1c2ecb97ee6ad5d66023c538662cd 127 Pfam PF13663 Domain of unknown function (DUF4148) 1 78 1.3E-7 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS05225 6113c5fec3291050bddc241be7993c4a 257 SUPERFAMILY SSF161098 58 240 1.44E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05225 6113c5fec3291050bddc241be7993c4a 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 238 1.5E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL504_RS05225 6113c5fec3291050bddc241be7993c4a 257 Gene3D G3DSA:1.10.3720.10 13 256 1.7E-25 T 28-03-2018 AL504_RS28430 5ce5bcab8aa3c20fdf2ddbbfdb2c7106 430 Pfam PF04932 O-Antigen ligase 190 332 1.2E-12 T 28-03-2018 IPR007016 O-antigen ligase-related AL504_RS17155 3e00823c2ba6456a6e42242dcf8fac60 125 Pfam PF05610 Protein of unknown function (DUF779) 17 110 5.9E-48 T 28-03-2018 IPR008497 Protein of unknown function DUF779 AL504_RS17155 3e00823c2ba6456a6e42242dcf8fac60 125 PIRSF PIRSF009151 2 124 6.0E-58 T 28-03-2018 IPR008497 Protein of unknown function DUF779 AL504_RS09570 3eb055a2d2c6bde2acaec2dd67fb017d 128 Gene3D G3DSA:3.90.1720.10 1 128 4.6E-7 T 28-03-2018 AL504_RS04075 4255a23e3b669d1fabf64b048fc44379 184 Pfam PF05598 Transposase domain (DUF772) 85 140 3.1E-9 T 28-03-2018 IPR008490 Transposase InsH, N-terminal AL504_RS29715 e22378928ea0b205d1157aed97d3155a 269 Pfam PF12867 DinB superfamily 115 249 2.4E-10 T 28-03-2018 IPR024775 DinB-like domain AL504_RS29715 e22378928ea0b205d1157aed97d3155a 269 SUPERFAMILY SSF109854 108 256 3.82E-25 T 28-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AL504_RS29715 e22378928ea0b205d1157aed97d3155a 269 Gene3D G3DSA:1.20.120.450 103 258 4.5E-16 T 28-03-2018 AL504_RS05605 2e9a72d80cbc573020f054d74074308a 287 Gene3D G3DSA:3.30.1980.10 33 124 1.9E-7 T 28-03-2018 AL504_RS05605 2e9a72d80cbc573020f054d74074308a 287 Gene3D G3DSA:3.30.1980.10 207 270 0.0022 T 28-03-2018 AL504_RS07470 2650fca5af7462c2463eec439771d08d 52 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 10 51 3.4E-24 T 28-03-2018 IPR004448 Nitrate reductas, NapE, periplasmic AL504_RS07470 2650fca5af7462c2463eec439771d08d 52 Pfam PF06796 Periplasmic nitrate reductase protein NapE 3 51 1.5E-22 T 28-03-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE AL504_RS20320 870e6ea15f3389d1536f2d13551d43aa 393 SUPERFAMILY SSF53756 69 349 1.1E-8 T 28-03-2018 AL504_RS26615 89f110e1d1e5ebc891311dc7ff8f80b0 299 Gene3D G3DSA:2.60.40.10 181 297 0.0022 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS15415 c7cc937529e827b3f12f6094f8b02e29 227 Gene3D G3DSA:3.90.20.10 127 227 6.5E-4 T 28-03-2018 AL504_RS15415 c7cc937529e827b3f12f6094f8b02e29 227 Gene3D G3DSA:3.90.20.10 6 114 0.024 T 28-03-2018 AL504_RS09840 38afd054340333c44928623f46733e8f 233 Pfam PF11254 Protein of unknown function (DUF3053) 11 227 1.7E-72 T 28-03-2018 IPR021413 Protein of unknown function DUF3053 AL504_RS01820 1bda7cd779a4617e991127a4ddf01bb5 370 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 130 4.3E-39 T 28-03-2018 IPR010657 ImpA, N-terminal AL504_RS01820 1bda7cd779a4617e991127a4ddf01bb5 370 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 3 361 2.3E-117 T 28-03-2018 IPR017740 Type VI secretion system-associated, ImpA AL504_RS10315 9e77eff3f5f76649fb10db6111a7762b 153 Gene3D G3DSA:1.20.1250.20 42 129 0.0029 T 28-03-2018 AL504_RS01390 319c3c9a26b016fea9956db36c0e7b79 163 Gene3D G3DSA:3.40.630.30 1 163 4.4E-32 T 28-03-2018 AL504_RS01390 319c3c9a26b016fea9956db36c0e7b79 163 Pfam PF00583 Acetyltransferase (GNAT) family 19 141 1.8E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS01390 319c3c9a26b016fea9956db36c0e7b79 163 SUPERFAMILY SSF55729 1 162 5.75E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS21855 d42803bbc69a8364788f103669f2bcd2 446 Pfam PF02667 Short chain fatty acid transporter 2 437 7.7E-128 T 28-03-2018 IPR006160 Short chain fatty acid transporter AtoE AL504_RS19460 612a5c5fbe47696311b5540497161314 145 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 6 137 1.7E-19 T 28-03-2018 IPR009936 Protein of unknown function DUF1468 AL504_RS12180 004e5228019275042d50be55440cfa4d 219 Pfam PF02620 Uncharacterized ACR, COG1399 82 216 2.9E-16 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AL504_RS28855 51d5085d4af0e52624bb38fe4ea7ef57 108 Pfam PF08666 SAF domain 18 88 1.9E-10 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS28855 51d5085d4af0e52624bb38fe4ea7ef57 108 SMART SM00858 18 89 6.2E-13 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL504_RS02345 a9f439ec1f995abeb577591336c2f6fe 527 Pfam PF08811 Protein of unknown function (DUF1800) 53 526 2.4E-135 T 28-03-2018 IPR014917 Protein of unknown function DUF1800 AL504_RS30940 6b4695e6124dc2d1f7486ba6fda984b3 116 Pfam PF02924 Bacteriophage lambda head decoration protein D 3 97 2.0E-26 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 AL504_RS30940 6b4695e6124dc2d1f7486ba6fda984b3 116 Gene3D G3DSA:2.40.300.10 2 109 3.7E-21 T 28-03-2018 AL504_RS30630 a18f38f22effc8d3cf1b87e48b0ddb09 212 Pfam PF09335 SNARE associated Golgi protein 39 163 2.1E-15 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL504_RS08680 0173c8cca54566ae3d95ac9ba79ddc56 299 Pfam PF00482 Type II secretion system (T2SS), protein F 161 286 1.3E-14 T 28-03-2018 IPR018076 Type II secretion system F domain AL504_RS18240 d859b4b96ad6a802dc95b9e2c4af7436 655 Pfam PF11843 Protein of unknown function (DUF3363) 281 652 2.5E-140 T 28-03-2018 IPR021795 Protein of unknown function DUF3363 AL504_RS15080 d6669b3ea3dae1447cadc0d6b60379c6 134 Pfam PF03788 LrgA family 30 121 4.9E-23 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 AL504_RS29075 41f78f45a6b3f72f08407f927d4c9b4d 331 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 27 301 4.4E-12 T 28-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AL504_RS18475 681abb4222d5387a380474e23d3f97bf 490 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 475 5.2E-105 T 28-03-2018 IPR010352 Protein of unknown function DUF945 AL504_RS12760 14e0d970fba5c87bf33cd0a0cf38057d 102 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 1.3E-29 T 28-03-2018 IPR010696 Protein of unknown function DUF1272 AL504_RS03725 dc6516d2d6b7173290d7fc19159bab03 147 Pfam PF11162 Protein of unknown function (DUF2946) 23 143 7.2E-7 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 AL504_RS21725 b7f2c6bb0e95e712e8c02063c0e866d2 63 Pfam PF11174 Protein of unknown function (DUF2970) 4 59 5.0E-22 T 28-03-2018 IPR021344 Protein of unknown function DUF2970 AL504_RS22970 841292ad8b5353c7ca5309e646cb84ff 169 Gene3D G3DSA:3.40.630.30 1 168 2.1E-33 T 28-03-2018 AL504_RS22970 841292ad8b5353c7ca5309e646cb84ff 169 Pfam PF00583 Acetyltransferase (GNAT) family 27 140 1.5E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL504_RS22970 841292ad8b5353c7ca5309e646cb84ff 169 SUPERFAMILY SSF55729 2 166 1.15E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL504_RS04270 3d5d8dc4249a26cd64f0f21ecaa4605a 703 Pfam PF12805 FUSC-like inner membrane protein yccS 69 263 1.3E-8 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AL504_RS04270 3d5d8dc4249a26cd64f0f21ecaa4605a 703 Pfam PF13515 Fusaric acid resistance protein-like 404 529 3.8E-17 T 28-03-2018 AL504_RS23965 068b714e75746477897420fd6aaf86b2 361 Pfam PF03929 PepSY-associated TM region 8 350 1.5E-50 T 28-03-2018 IPR005625 PepSY-associated TM protein AL504_RS20800 54fc84c0f1b4cd5c4c19f5a26ac4efaf 137 Pfam PF04343 Protein of unknown function, DUF488 7 117 1.5E-27 T 28-03-2018 IPR007438 Protein of unknown function DUF488 AL504_RS09635 1dc834662df320bb4ad39c723ce4c3dd 200 Gene3D G3DSA:1.20.1170.10 6 199 1.1E-5 T 28-03-2018 AL504_RS09365 aabcc9258ca2b75957e1185f27497840 185 Pfam PF07291 Methylamine utilisation protein MauE 2 167 4.1E-15 T 28-03-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 AL504_RS17440 47c630bc1a3e2df23aa4e43078b06a89 107 SUPERFAMILY SSF46626 46 99 5.44E-8 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL504_RS27750 404ba7ae1dfcbd6f47fe3772b98adbdf 215 Pfam PF02163 Peptidase family M50 131 179 1.9E-7 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 AL504_RS27035 42a9b00eca9281f30eac2af2b7bc44db 232 Gene3D G3DSA:3.40.50.1860 113 218 9.2E-10 T 28-03-2018 AL504_RS27035 42a9b00eca9281f30eac2af2b7bc44db 232 Gene3D G3DSA:3.40.50.1860 34 110 0.0011 T 28-03-2018 AL504_RS22950 1e70dbbaa0a756bb09c7316ecb42bbd7 1263 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 936 1259 1.3E-32 T 28-03-2018 IPR007452 Translocation and assembly module TamB AL504_RS04330 cb94e52190f9448bf22f5118260bb840 94 Pfam PF04070 Domain of unknown function (DUF378) 32 87 2.2E-11 T 28-03-2018 IPR007211 Protein of unknown function DUF378 AL504_RS13830 4be0bd59a605bd13a9d4e234e4bcba91 74 Pfam PF05433 Glycine zipper 2TM domain 34 72 1.8E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL504_RS00700 41e0b53061057cf498a8fa66c72a24d6 394 SUPERFAMILY SSF52266 173 381 3.52E-23 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS00700 41e0b53061057cf498a8fa66c72a24d6 394 Gene3D G3DSA:3.40.50.1110 172 383 5.5E-25 T 28-03-2018 AL504_RS00700 41e0b53061057cf498a8fa66c72a24d6 394 Pfam PF14606 GDSL-like Lipase/Acylhydrolase family 178 277 1.4E-13 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS03025 8ff6cb07d24339dfc2962bf38a67a614 431 Pfam PF04143 Sulphur transport 64 423 3.4E-57 T 28-03-2018 IPR007272 Sulphur transport domain AL504_RS18195 187b992b9fb4f2f9c608f6a5907f7890 251 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 153 235 7.3E-29 T 28-03-2018 IPR018754 Protein of unknown function DUF2285 AL504_RS20840 c2e026875d82e189eb90ed90f942c724 145 Pfam PF04143 Sulphur transport 47 131 6.9E-8 T 28-03-2018 IPR007272 Sulphur transport domain AL504_RS17165 318ab59bfb4d92a671ba04e36e080028 79 Pfam PF11142 Protein of unknown function (DUF2917) 3 61 5.6E-14 T 28-03-2018 IPR021317 Protein of unknown function DUF2917 AL504_RS06020 aa27c33bbb8520bf2f3093f6162a9f2b 168 Pfam PF04463 Protein of unknown function (DUF523) 4 150 1.2E-41 T 28-03-2018 IPR007553 Domain of unknown function DUF523 AL504_RS27210 7792419ca63e591f5d57e009a0597b40 324 Gene3D G3DSA:1.20.1110.10 105 243 8.6E-9 T 28-03-2018 AL504_RS27210 7792419ca63e591f5d57e009a0597b40 324 Pfam PF00122 E1-E2 ATPase 166 239 3.4E-10 T 28-03-2018 AL504_RS00680 7140c4895d819e7902f4f82a95b1dabd 483 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 17 444 6.1E-73 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AL504_RS27845 4d9c6ca54da61b615199cc9ffb465860 403 Pfam PF04235 Protein of unknown function (DUF418) 224 391 6.2E-43 T 28-03-2018 IPR007349 Domain of unknown function DUF418 AL504_RS12000 cd60aad37790e4fd73cf2305e05d8c0a 135 SUPERFAMILY SSF143744 2 134 4.71E-38 T 28-03-2018 AL504_RS12000 cd60aad37790e4fd73cf2305e05d8c0a 135 Pfam PF03928 Haem-degrading 7 130 8.2E-32 T 28-03-2018 IPR005624 Haem-degrading AL504_RS15180 fc8120f8ae4702017cf07452789a9d4d 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.8E-49 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 AL504_RS15180 fc8120f8ae4702017cf07452789a9d4d 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.12 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 AL504_RS20675 7718ead312808e62ac3341e8af3792fa 111 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 103 8.7E-33 T 28-03-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV AL504_RS06345 d4941dbd72e08619152fb5efb53d6699 202 Pfam PF03748 Flagellar basal body-associated protein FliL 102 202 1.8E-21 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL504_RS04975 5ed01806cf2a546e6d1b11524d93777b 433 PIRSF PIRSF006066 5 433 2.5E-88 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS04975 5ed01806cf2a546e6d1b11524d93777b 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 422 1.3E-80 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL504_RS04975 5ed01806cf2a546e6d1b11524d93777b 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 428 4.4E-125 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL504_RS10210 78d10f1b4eecd3baae254a7711591fcc 407 Pfam PF04143 Sulphur transport 62 385 6.9E-72 T 28-03-2018 IPR007272 Sulphur transport domain AL504_RS19795 b938a6a667de1f42ae7dcba33bcf86a6 310 Gene3D G3DSA:3.40.50.720 1 310 3.7E-34 T 28-03-2018 AL504_RS19795 b938a6a667de1f42ae7dcba33bcf86a6 310 SUPERFAMILY SSF51735 278 307 2.14E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19795 b938a6a667de1f42ae7dcba33bcf86a6 310 SUPERFAMILY SSF51735 1 231 2.14E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL504_RS19795 b938a6a667de1f42ae7dcba33bcf86a6 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 206 1.2E-18 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL504_RS03815 4a252f24a1205a7ec8cd2e260f5ea734 157 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 155 3.7E-61 T 28-03-2018 IPR018729 Protein of unknown function DUF2269, transmembrane AL504_RS29935 11539745fd6ff4a7f5cba6a72919c485 453 Pfam PF01554 MatE 31 187 1.5E-16 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS29935 11539745fd6ff4a7f5cba6a72919c485 453 Pfam PF01554 MatE 257 406 7.5E-13 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS29935 11539745fd6ff4a7f5cba6a72919c485 453 PIRSF PIRSF006603 8 448 1.9E-53 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL504_RS19175 98cf0c4ca6a4f5dbe4665e37e4c85952 579 Pfam PF02538 Hydantoinase B/oxoprolinase 20 544 5.0E-170 T 28-03-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403 AL504_RS17250 43529aeb8468cc11d33fe24b998a137d 337 Pfam PF04116 Fatty acid hydroxylase superfamily 135 274 1.7E-30 T 28-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL504_RS23750 da404a394f456dd4308acae554665e57 170 Pfam PF11086 Protein of unknown function (DUF2878) 4 156 2.9E-40 T 28-03-2018 IPR021306 Protein of unknown function DUF2878 AL504_RS10775 fc2cec4f1270fc6eb8ba1b093ec37fb0 43 Pfam PF08085 Entericidin EcnA/B family 21 41 9.7E-10 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AL504_RS18435 81ede98aa7527b23defe304e6dcb55b4 476 Pfam PF11067 Protein of unknown function (DUF2868) 162 454 1.7E-75 T 28-03-2018 IPR021296 Protein of unknown function DUF2868 AL504_RS15735 23da25b23093b6af8ca87bb622603ddc 186 Pfam PF02325 YGGT family 12 80 3.2E-14 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 AL504_RS15735 23da25b23093b6af8ca87bb622603ddc 186 Pfam PF02325 YGGT family 110 176 2.4E-15 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 AL504_RS00040 860b2c4af7853d226f3416e880201bd2 102 Gene3D G3DSA:3.90.580.10 40 102 0.0013 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL504_RS00045 ea58f66449d8bb304bfb8961a83b751a 460 Gene3D G3DSA:1.10.1220.10 402 427 4.7E-13 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL504_RS07510 d3a971be5eba72ca971a7d4fb6b546a4 53 Pfam PF04995 Heme exporter protein D (CcmD) 11 46 1.6E-8 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL504_RS07510 d3a971be5eba72ca971a7d4fb6b546a4 53 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 9 47 7.4E-9 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL504_RS09595 941dd7cf2176b111b8ce2477e9db4826 109 Pfam PF08748 Phage tail assembly chaperone 1 109 2.9E-29 T 28-03-2018 IPR014859 Phage tail assembly chaperone AL504_RS05290 ff4b8bf059a51a9787cd40575d62cc19 114 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 109 1.4E-27 T 28-03-2018 AL504_RS28650 d071e9f279769d67fbdc8c28626ccd5c 153 Pfam PF12266 Protein of unknown function (DUF3613) 83 145 5.0E-10 T 28-03-2018 IPR022053 Protein of unknown function DUF3613 AL504_RS08870 ecadf8971c3832b7adf8ec1ef9710849 128 Gene3D G3DSA:1.10.720.10 76 106 2.0E-5 T 28-03-2018 AL504_RS25245 7e04bb10aafef968daf93c95ddb0e710 132 Pfam PF11162 Protein of unknown function (DUF2946) 12 130 9.9E-14 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 AL504_RS20585 e526f28da8a5659dcac7bd664c8d2c14 367 Pfam PF03824 High-affinity nickel-transport protein 80 363 2.5E-58 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AL504_RS16070 b4b37df66379b5639cc5d4152a099f7c 322 Gene3D G3DSA:1.10.3470.10 3 306 2.3E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL504_RS16070 b4b37df66379b5639cc5d4152a099f7c 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 294 1.7E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL504_RS10860 45620e2aec5c2f85e3e3e5f9b69d7e4f 325 PIRSF PIRSF026166 1 325 2.3E-133 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter AL504_RS10860 45620e2aec5c2f85e3e3e5f9b69d7e4f 325 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 317 3.7E-96 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter AL504_RS03745 19b114e28da972b61443e86dd47114f6 141 Pfam PF06961 Protein of unknown function (DUF1294) 59 113 3.1E-24 T 28-03-2018 IPR010718 Protein of unknown function DUF1294 AL504_RS22190 d87f784ce041226abef22c7f9fc9d0c6 198 Pfam PF06805 Bacteriophage lambda tail assembly protein I 7 89 3.4E-9 T 28-03-2018 IPR010654 Bacteriophage lambda tail assembly I AL504_RS05360 6166ea37ec4ee230fec99d097b3891b9 128 Pfam PF10861 Protein of Unknown function (DUF2784) 4 111 6.3E-35 T 28-03-2018 IPR021218 Protein of unknown function DUF2784 AL504_RS20235 11bb7779d3b2e757ea50f7962266fd1b 427 Pfam PF07399 Putative Na+/H+ antiporter 5 425 3.9E-180 T 28-03-2018 IPR009978 Putative Na+/H+ antiporter AL504_RS16165 7e43a6eb8a219621bf4877e98f0a1cde 257 Pfam PF04170 NlpE N-terminal domain 138 220 2.9E-5 T 28-03-2018 IPR007298 Copper resistance lipoprotein NlpE AL504_RS23995 f62bde283bc56d1fda7dcacf2cfcafae 120 Gene3D G3DSA:3.40.50.360 4 117 6.9E-4 T 28-03-2018 IPR029039 Flavoprotein-like domain AL504_RS29460 88b20061e566310aebb63edbc422dadf 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 160 5.1E-20 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS01995 ec6256c0b865483506407416e30f4301 446 Pfam PF03055 Retinal pigment epithelial membrane protein 12 439 1.5E-93 T 28-03-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 AL504_RS09825 7f3a59f58754b8c9d46d45cbfeba90af 228 Gene3D G3DSA:2.30.130.30 1 221 3.7E-38 T 28-03-2018 AL504_RS20935 386ce1667ef9fefdf063c808151954b0 210 Pfam PF01810 LysE type translocator 24 208 2.1E-33 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL504_RS17855 f81838229ca7eadf43cd04a6b34cc602 264 SUPERFAMILY SSF143422 35 107 9.02E-5 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL504_RS10025 6aa36a2a42bf55f8999c44b756e5fc94 843 Pfam PF02687 FtsX-like permease family 302 385 8.5E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL504_RS10025 6aa36a2a42bf55f8999c44b756e5fc94 843 Pfam PF02687 FtsX-like permease family 747 836 1.5E-7 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL504_RS14990 5c0343fff7cafb8dcbbf041480ba4d9a 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 138 1.6E-26 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL504_RS30975 fa310a24bedc06a769f933a8e36dda91 113 Pfam PF05939 Phage minor tail protein 5 109 4.3E-33 T 28-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail AL504_RS07970 f7ded56f18971c9e1683772e1cad7b2e 239 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 22 235 3.5E-71 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL504_RS22890 6130dd6771df56fc8453c238adb00e1d 126 Pfam PF13698 Domain of unknown function (DUF4156) 36 125 4.4E-30 T 28-03-2018 IPR025294 Protein of unknown function DUF4156 AL504_RS19875 4391c2ce97ebed2889f96688f1919af5 220 Gene3D G3DSA:3.40.50.1110 7 211 1.4E-14 T 28-03-2018 AL504_RS19875 4391c2ce97ebed2889f96688f1919af5 220 SUPERFAMILY SSF52266 77 210 1.02E-13 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS19875 4391c2ce97ebed2889f96688f1919af5 220 SUPERFAMILY SSF52266 9 50 1.02E-13 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL504_RS03340 e45423e8924ed9da013dc6813300ea01 213 Pfam PF09335 SNARE associated Golgi protein 47 170 1.4E-20 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL504_RS24925 104e1c6f3af577ba17e3e432247b0f18 256 Pfam PF01925 Sulfite exporter TauE/SafE 19 248 4.9E-30 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL504_RS23185 0c0c6cbd294fc37593140af0af01d061 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 50 177 2.9E-27 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL504_RS11400 5043d2725d44e4f0dd58a931979f75ff 104 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 86 3.3E-16 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AL504_RS29375 cbd75e51f4d6c80562a6541abfe0e4a7 161 Pfam PF09722 Protein of unknown function (DUF2384) 109 158 2.7E-9 T 28-03-2018 IPR024467 Domain of unknown function DUF2384 AL504_RS26800 84007a7ac6f9bafcc4c19a04bf720112 210 Gene3D G3DSA:3.90.70.10 56 210 3.9E-11 T 28-03-2018 AL504_RS29345 76250a9cf2aada1ae9cb575c2c77f626 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 18 136 2.9E-27 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL504_RS26620 dc730b66befdd81b81fd46f07f6db8d7 294 Gene3D G3DSA:2.60.40.10 214 293 0.36 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL504_RS02490 9398e1f7feec19ad44c83b4248d0c66e 70 Pfam PF04328 Selenoprotein, putative 12 70 1.1E-29 T 28-03-2018 IPR007423 Selenoprotein, putative AL504_RS20760 4a16796908a846e2bfab263b79042ad0 115 Pfam PF13682 Chemoreceptor zinc-binding domain 10 75 1.4E-11 T 28-03-2018 IPR025991 Chemoreceptor zinc-binding domain AL504_RS25420 4f4366ffc1738e37347ecae5751b29fe 85 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 71 2.3E-27 T 28-03-2018 IPR021074 Formate dehydrogenase, delta subunit AL504_RS10825 1e99b168a15590cbf3f444faa9818d3d 187 Pfam PF09335 SNARE associated Golgi protein 25 145 6.5E-18 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL504_RS02155 c03a24e4ce3467e8e5b7d236f7960632 317 Pfam PF00892 EamA-like transporter family 4 112 6.8E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL504_RS27720 165f33238c3f5601b412077a9d60a89a 216 Gene3D G3DSA:3.40.630.30 28 157 1.3E-5 T 28-03-2018 AL504_RS02545 51a12d86ff07db9e8c07ddfbe18c5c59 114 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 65 114 2.0E-11 T 28-03-2018 IPR014299 Pentapeptide MXKDX repeat protein AL504_RS02545 51a12d86ff07db9e8c07ddfbe18c5c59 114 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 4 76 3.2E-21 T 28-03-2018 IPR014299 Pentapeptide MXKDX repeat protein AL504_RS18375 89ca09f86a0465ec9b28ee16aaf7583a 420 Pfam PF03743 Bacterial conjugation TrbI-like protein 226 405 3.1E-59 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AL504_RS24975 6429594b62e3da792629b8451f566d99 119 Pfam PF13663 Domain of unknown function (DUF4148) 79 107 5.3E-8 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS24975 6429594b62e3da792629b8451f566d99 119 Pfam PF13663 Domain of unknown function (DUF4148) 1 69 7.2E-11 T 28-03-2018 IPR025421 Protein of unknown function DUF4148 AL504_RS10370 a475b9f9b6f7b6fd5c05014f09b59b20 557 Gene3D G3DSA:1.20.5.1230 190 432 2.4E-15 T 28-03-2018 AL504_RS03070 7a46da6068f08460d5e001a4c6a47332 162 Pfam PF03928 Haem-degrading 30 153 4.0E-28 T 28-03-2018 IPR005624 Haem-degrading AL504_RS03070 7a46da6068f08460d5e001a4c6a47332 162 SUPERFAMILY SSF143744 23 155 5.89E-35 T 28-03-2018 AL504_RS24170 4f43511e79d7aeffbf05a0a477960084 565 Pfam PF02538 Hydantoinase B/oxoprolinase 12 534 9.1E-139 T 28-03-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403 AL504_RS06990 7defd418384f7be39043e65b8a6e6236 405 Gene3D G3DSA:3.40.50.1110 48 351 2.2E-6 T 28-03-2018 AL504_RS21315 e02f2c540a610d241577a0428e602c30 196 Pfam PF14334 Domain of unknown function (DUF4390) 32 184 3.8E-50 T 28-03-2018 IPR025500 Protein of unknown function DUF4390 AL504_RS24445 a28d750526bced35f88bbc340e443e4d 142 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 9 140 7.6E-11 T 28-03-2018 IPR009936 Protein of unknown function DUF1468 AL504_RS06840 8433a583e043ac1b35913a3e69f836c3 251 Pfam PF01203 Type II secretion system (T2SS), protein N 42 243 1.6E-21 T 28-03-2018 IPR022792 Type II secretion system, protein N AL504_RS17875 2ec924cb779519d2ccc03ef085a69f46 175 Pfam PF02417 Chromate transporter 8 169 4.0E-37 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL504_RS16610 fca769dfdfb10bf5fdfdfb0a0865e4d0 391 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 9 387 7.1E-127 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AL504_RS20075 5cf4f522699e649a85a8072c2715f6e8 667 Pfam PF05140 ResB-like family 1 655 1.3E-155 T 28-03-2018 IPR007816 ResB-like domain AL504_RS04140 b312040bb6125ca395ab6bd182d113f3 156 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 15 151 8.5E-20 T 28-03-2018 IPR009936 Protein of unknown function DUF1468 AL504_RS00140 323927d8984818a36ad0b201ae940c0f 77 Pfam PF12703 Toxin of toxin-antitoxin type 1 system 1 75 5.0E-39 T 28-03-2018 IPR024640 Toxin-antitoxin type 1 system, toxin component AL504_RS25850 4c7b8325f718fe7e53c093830de61889 491 Pfam PF01384 Phosphate transporter family 30 479 9.0E-84 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652