AL520_RS00010	SM00344	helix_turn_helix ASNC type
AL520_RS00050	SM00822	AL520_RS00050
AL520_RS00055	SM00822	AL520_RS00055
AL520_RS00065	SM00448	cheY-homologous receiver domain
AL520_RS00065	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS00070	SM00387	Histidine kinase-like ATPases
AL520_RS00070	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS00080	SM00421	helix_turn_helix, Lux Regulon
AL520_RS00080	SM00448	cheY-homologous receiver domain
AL520_RS00085	SM00387	Histidine kinase-like ATPases
AL520_RS00085	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS00095	SM00831	Cation transporter/ATPase, N-terminus
AL520_RS00110	SM00965	Secretin and TonB N terminus short domain
AL520_RS00185	SM00829	Enoylreductase
AL520_RS00225	SM00028	Tetratricopeptide repeats
AL520_RS00260	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS00260	SM00322	K homology RNA-binding domain
AL520_RS00265	SM01387	AL520_RS00265
AL520_RS00325	SM01130	AL520_RS00325
AL520_RS00330	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL520_RS00370	SM00382	ATPases associated with a variety of cellular activities
AL520_RS00380	SM01119	AL520_RS00380
AL520_RS00400	SM00382	ATPases associated with a variety of cellular activities
AL520_RS00405	SM00382	ATPases associated with a variety of cellular activities
AL520_RS00430	SM00382	ATPases associated with a variety of cellular activities
AL520_RS00430	SM00843	AL520_RS00430
AL520_RS00440	SM00463	Small MutS-related domain
AL520_RS00480	SM00387	Histidine kinase-like ATPases
AL520_RS00480	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS00485	SM00448	cheY-homologous receiver domain
AL520_RS00485	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS00505	SM01130	AL520_RS00505
AL520_RS00520	SM01329	AL520_RS00520
AL520_RS00540	SM00382	ATPases associated with a variety of cellular activities
AL520_RS00575	SM00271	DnaJ molecular chaperone homology domain
AL520_RS00690	SM00054	EF-hand, calcium binding motif
AL520_RS00860	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS00885	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS01025	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL520_RS01025	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL520_RS01025	SM00493	AL520_RS01025
AL520_RS01130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS01210	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS01215	SM00852	Probable molybdopterin binding domain
AL520_RS01230	SM00487	DEAD-like helicases superfamily
AL520_RS01230	SM00490	helicase superfamily c-terminal domain
AL520_RS01235	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS01305	SM00831	Cation transporter/ATPase, N-terminus
AL520_RS01320	SM01011	Aminopeptidase P, N-terminal domain
AL520_RS01345	SM00798	AICARFT/IMPCHase bienzyme
AL520_RS01345	SM00851	MGS-like domain
AL520_RS01355	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL520_RS01370	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS01375	SM00387	Histidine kinase-like ATPases
AL520_RS01380	SM00448	cheY-homologous receiver domain
AL520_RS01380	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS01390	SM00341	Helicase and RNase D C-terminal
AL520_RS01390	SM00487	DEAD-like helicases superfamily
AL520_RS01390	SM00490	helicase superfamily c-terminal domain
AL520_RS01390	SM00956	AL520_RS01390
AL520_RS01425	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS01465	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01480	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS01490	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01495	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01515	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS01565	SM00822	AL520_RS01565
AL520_RS01580	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01585	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01610	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS01615	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01660	SM00382	ATPases associated with a variety of cellular activities
AL520_RS01685	SM00903	Flavin reductase like domain
AL520_RS01755	SM00646	AL520_RS01755
AL520_RS01770	SM00853	MutL C terminal dimerisation domain
AL520_RS01770	SM01340	AL520_RS01770
AL520_RS01875	SM00869	Autotransporter beta-domain
AL520_RS01890	SM00822	AL520_RS01890
AL520_RS01905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS01905	SM00091	PAS domain
AL520_RS01905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS01935	SM00563	Phosphate acyltransferases
AL520_RS01980	SM00650	Ribosomal RNA adenine dimethylases
AL520_RS02020	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS02055	SM00822	AL520_RS02055
AL520_RS02065	SM00267	diguanylate cyclase
AL520_RS02095	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS02115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS02115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS02155	SM00382	ATPases associated with a variety of cellular activities
AL520_RS02180	SM00382	ATPases associated with a variety of cellular activities
AL520_RS02180	SM00930	AL520_RS02180
AL520_RS02225	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL520_RS02225	SM00924	MgtE intracellular N domain
AL520_RS02240	SM00344	helix_turn_helix ASNC type
AL520_RS02265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS02265	SM00895	AL520_RS02265
AL520_RS02275	SM00957	SecA DEAD-like domain
AL520_RS02275	SM00958	SecA preprotein cross-linking domain
AL520_RS02295	SM00864	Tubulin/FtsZ family, GTPase domain
AL520_RS02295	SM00865	Tubulin/FtsZ family, C-terminal domain
AL520_RS02300	SM00842	Cell division protein FtsA
AL520_RS02310	SM01209	AL520_RS02310
AL520_RS02370	SM00382	ATPases associated with a variety of cellular activities
AL520_RS02385	SM00151	SWI complex, BAF60b domains
AL520_RS02420	SM00344	helix_turn_helix ASNC type
AL520_RS02515	SM00387	Histidine kinase-like ATPases
AL520_RS02515	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS02520	SM00448	cheY-homologous receiver domain
AL520_RS02520	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS02575	SM00382	ATPases associated with a variety of cellular activities
AL520_RS02590	SM00344	helix_turn_helix ASNC type
AL520_RS02600	SM00838	Elongation factor G C-terminus
AL520_RS02600	SM00889	Elongation factor G, domain IV
AL520_RS02615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS02650	SM01130	AL520_RS02650
AL520_RS02655	SM00382	ATPases associated with a variety of cellular activities
AL520_RS02660	SM00382	ATPases associated with a variety of cellular activities
AL520_RS02680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS02680	SM00895	AL520_RS02680
AL520_RS02750	SM00479	AL520_RS02750
AL520_RS02775	SM00849	Metallo-beta-lactamase superfamily
AL520_RS02780	SM00257	Lysin motif
AL520_RS02830	SM01005	Alanine racemase, C-terminal domain
AL520_RS02840	SM00331	Sigma factor PP2C-like phosphatases
AL520_RS02840	SM01049	AL520_RS02840
AL520_RS02905	SM00382	ATPases associated with a variety of cellular activities
AL520_RS02950	SM00028	Tetratricopeptide repeats
AL520_RS03085	SM00763	PrkA AAA domain
AL520_RS03110	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS03135	SM00363	S4 RNA-binding domain
AL520_RS03160	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL520_RS03175	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03180	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03225	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03275	SM00344	helix_turn_helix ASNC type
AL520_RS03350	SM00878	Biotin carboxylase C-terminal domain
AL520_RS03380	SM00955	AL520_RS03380
AL520_RS03385	SM00448	cheY-homologous receiver domain
AL520_RS03385	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS03390	SM00387	Histidine kinase-like ATPases
AL520_RS03390	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS03405	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03435	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03450	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS03475	SM00563	Phosphate acyltransferases
AL520_RS03490	SM00732	Likely ribonuclease with RNase H fold.
AL520_RS03600	SM00052	Putative diguanylate phosphodiesterase
AL520_RS03600	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL520_RS03600	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS03600	SM00091	PAS domain
AL520_RS03600	SM00267	diguanylate cyclase
AL520_RS03605	SM00267	diguanylate cyclase
AL520_RS03620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS03620	SM00331	Sigma factor PP2C-like phosphatases
AL520_RS03625	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03630	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03650	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS03680	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03765	SM00421	helix_turn_helix, Lux Regulon
AL520_RS03820	SM00830	Chorismate mutase type II
AL520_RS03860	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03875	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS03880	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03895	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS03910	SM00478	endonuclease III
AL520_RS03915	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS03930	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL520_RS03935	SM00382	ATPases associated with a variety of cellular activities
AL520_RS03950	SM00829	Enoylreductase
AL520_RS03965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS03965	SM00895	AL520_RS03965
AL520_RS03970	SM01018	B12 binding domain
AL520_RS04025	SM00978	AL520_RS04025
AL520_RS04035	SM00448	cheY-homologous receiver domain
AL520_RS04035	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS04040	SM00387	Histidine kinase-like ATPases
AL520_RS04040	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS04045	SM00448	cheY-homologous receiver domain
AL520_RS04045	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS04050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS04050	SM00387	Histidine kinase-like ATPases
AL520_RS04050	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS04090	SM00796	Allophanate hydrolase subunit 1
AL520_RS04095	SM00797	Allophanate hydrolase subunit 2
AL520_RS04105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS04105	SM00895	AL520_RS04105
AL520_RS04135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS04135	SM00866	AL520_RS04135
AL520_RS04140	SM00858	AL520_RS04140
AL520_RS04185	SM00421	helix_turn_helix, Lux Regulon
AL520_RS04230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS04230	SM00895	AL520_RS04230
AL520_RS04240	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04245	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04285	SM00849	Metallo-beta-lactamase superfamily
AL520_RS04325	SM00421	helix_turn_helix, Lux Regulon
AL520_RS04420	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04425	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04450	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS04470	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS04480	SM00487	DEAD-like helicases superfamily
AL520_RS04480	SM00490	helicase superfamily c-terminal domain
AL520_RS04500	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04550	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS04560	SM00882	Coenzyme A transferase
AL520_RS04565	SM00882	Coenzyme A transferase
AL520_RS04600	SM00905	Dihydroneopterin aldolase
AL520_RS04625	SM00925	MltA specific insert domain
AL520_RS04665	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04705	SM00460	Transglutaminase/protease-like homologues
AL520_RS04755	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL520_RS04795	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04810	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04830	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS04885	SM00382	ATPases associated with a variety of cellular activities
AL520_RS04920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS04920	SM00895	AL520_RS04920
AL520_RS04940	SM01236	AL520_RS04940
AL520_RS04975	SM00972	Spore Coat Protein U domain
AL520_RS04990	SM00972	Spore Coat Protein U domain
AL520_RS05000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS05000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS05035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS05035	SM00866	AL520_RS05035
AL520_RS05045	SM00829	Enoylreductase
AL520_RS05065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS05065	SM00387	Histidine kinase-like ATPases
AL520_RS05065	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS05070	SM00448	cheY-homologous receiver domain
AL520_RS05070	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS05130	SM00052	Putative diguanylate phosphodiesterase
AL520_RS05130	SM00091	PAS domain
AL520_RS05130	SM00267	diguanylate cyclase
AL520_RS05190	SM00903	Flavin reductase like domain
AL520_RS05205	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS05240	SM00344	helix_turn_helix ASNC type
AL520_RS05250	SM00984	UDP binding domain
AL520_RS05335	SM00100	Cyclic nucleotide-monophosphate binding domain
AL520_RS05390	SM00797	Allophanate hydrolase subunit 2
AL520_RS05395	SM00796	Allophanate hydrolase subunit 1
AL520_RS05400	SM00878	Biotin carboxylase C-terminal domain
AL520_RS05445	SM00382	ATPases associated with a variety of cellular activities
AL520_RS05470	SM00382	ATPases associated with a variety of cellular activities
AL520_RS05555	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS05560	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS05655	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS05685	SM00382	ATPases associated with a variety of cellular activities
AL520_RS05705	SM00487	DEAD-like helicases superfamily
AL520_RS05705	SM00490	helicase superfamily c-terminal domain
AL520_RS05760	SM00917	LeuA allosteric (dimerisation) domain
AL520_RS05770	SM00354	helix_turn _helix lactose operon repressor
AL520_RS05780	SM00382	ATPases associated with a variety of cellular activities
AL520_RS05810	SM00836	DALR anticodon binding domain
AL520_RS05810	SM01016	Arginyl tRNA synthetase N terminal dom
AL520_RS05850	SM00849	Metallo-beta-lactamase superfamily
AL520_RS05855	SM00422	helix_turn_helix, mercury resistance
AL520_RS05895	SM00878	Biotin carboxylase C-terminal domain
AL520_RS05895	SM01209	AL520_RS05895
AL520_RS05915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS06005	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS06035	SM00965	Secretin and TonB N terminus short domain
AL520_RS06055	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS06070	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06080	SM01119	AL520_RS06080
AL520_RS06110	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL520_RS06110	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL520_RS06110	SM00493	AL520_RS06110
AL520_RS06120	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06130	SM00822	AL520_RS06130
AL520_RS06140	SM00344	helix_turn_helix ASNC type
AL520_RS06150	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AL520_RS06175	SM00903	Flavin reductase like domain
AL520_RS06195	SM00450	Rhodanese Homology Domain
AL520_RS06205	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06275	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS06285	SM00866	AL520_RS06285
AL520_RS06310	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS06310	SM00871	Bacterial transcription activator, effector binding domain
AL520_RS06355	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06360	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS06390	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06405	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS06450	SM00387	Histidine kinase-like ATPases
AL520_RS06450	SM00433	TopoisomeraseII
AL520_RS06455	SM00480	DNA polymerase III beta subunit
AL520_RS06460	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06460	SM00760	Bacterial dnaA protein helix-turn-helix domain
AL520_RS06475	SM01234	AL520_RS06475
AL520_RS06485	SM01060	AL520_RS06485
AL520_RS06510	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06515	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06550	SM00448	cheY-homologous receiver domain
AL520_RS06550	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS06555	SM00387	Histidine kinase-like ATPases
AL520_RS06555	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS06585	SM00357	Cold shock protein domain
AL520_RS06590	SM01228	AL520_RS06590
AL520_RS06610	SM00470	ParB-like nuclease domain
AL520_RS06615	SM00870	AL520_RS06615
AL520_RS06635	SM00450	Rhodanese Homology Domain
AL520_RS06645	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL520_RS06645	SM01134	AL520_RS06645
AL520_RS06655	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06670	SM01230	AL520_RS06670
AL520_RS06715	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL520_RS06715	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL520_RS06720	SM00649	Ribosomal protein L11/L12
AL520_RS06745	SM00663	RNA polymerase I subunit A N-terminus
AL520_RS06760	SM00387	Histidine kinase-like ATPases
AL520_RS06760	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS06760	SM01080	AL520_RS06760
AL520_RS06770	SM00448	cheY-homologous receiver domain
AL520_RS06770	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS06775	SM00448	cheY-homologous receiver domain
AL520_RS06775	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS06790	SM00838	Elongation factor G C-terminus
AL520_RS06790	SM00889	Elongation factor G, domain IV
AL520_RS06800	SM01403	AL520_RS06800
AL520_RS06820	SM01382	AL520_RS06820
AL520_RS06820	SM01383	AL520_RS06820
AL520_RS06835	SM00322	K homology RNA-binding domain
AL520_RS06870	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06875	SM00382	ATPases associated with a variety of cellular activities
AL520_RS06890	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS06915	SM01374	AL520_RS06915
AL520_RS06990	SM00363	S4 RNA-binding domain
AL520_RS06990	SM01390	AL520_RS06990
AL520_RS06995	SM00662	RNA polymerases D
AL520_RS07025	SM01004	Delta-aminolevulinic acid dehydratase
AL520_RS07060	SM01219	AL520_RS07060
AL520_RS07080	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL520_RS07140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS07140	SM00895	AL520_RS07140
AL520_RS07170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL520_RS07175	SM01130	AL520_RS07175
AL520_RS07205	SM00834	Putative regulatory protein
AL520_RS07225	SM00155	Phospholipase D. Active site motifs.
AL520_RS07280	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07335	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07355	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL520_RS07375	SM00671	Sel1-like repeats.
AL520_RS07385	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS07400	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07400	SM01086	C-terminal, D2-small domain, of ClpB protein
AL520_RS07415	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL520_RS07430	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07495	SM00344	helix_turn_helix ASNC type
AL520_RS07500	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS07520	SM00895	AL520_RS07520
AL520_RS07525	SM00903	Flavin reductase like domain
AL520_RS07565	SM00996	S-adenosyl-L-homocysteine hydrolase
AL520_RS07565	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AL520_RS07590	SM00460	Transglutaminase/protease-like homologues
AL520_RS07625	SM00487	DEAD-like helicases superfamily
AL520_RS07625	SM00490	helicase superfamily c-terminal domain
AL520_RS07630	SM00986	Uracil DNA glycosylase superfamily
AL520_RS07630	SM00987	UreE urease accessory protein, C-terminal domain 
AL520_RS07675	SM00646	AL520_RS07675
AL520_RS07720	SM00849	Metallo-beta-lactamase superfamily
AL520_RS07725	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL520_RS07750	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07770	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07780	SM00100	Cyclic nucleotide-monophosphate binding domain
AL520_RS07785	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS07795	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07800	SM00382	ATPases associated with a variety of cellular activities
AL520_RS07845	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL520_RS07870	SM00845	GatB domain
AL520_RS07945	SM00749	bacterial OsmY and nodulation domain
AL520_RS07990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS08010	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08030	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL520_RS08060	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08065	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08105	SM00460	Transglutaminase/protease-like homologues
AL520_RS08125	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS08155	SM01118	AL520_RS08155
AL520_RS08190	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS08210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS08210	SM00387	Histidine kinase-like ATPases
AL520_RS08210	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS08215	SM00448	cheY-homologous receiver domain
AL520_RS08270	SM00450	Rhodanese Homology Domain
AL520_RS08275	SM00855	Phosphoglycerate mutase family
AL520_RS08285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS08285	SM00245	tail specific protease
AL520_RS08295	SM00267	diguanylate cyclase
AL520_RS08300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS08300	SM00895	AL520_RS08300
AL520_RS08320	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS08325	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS08330	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL520_RS08385	SM00422	helix_turn_helix, mercury resistance
AL520_RS08405	SM01007	Class II Aldolase and Adducin N-terminal domain
AL520_RS08430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS08430	SM00895	AL520_RS08430
AL520_RS08475	SM00344	helix_turn_helix ASNC type
AL520_RS08495	SM00937	AL520_RS08495
AL520_RS08550	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS08605	SM00822	AL520_RS08605
AL520_RS08610	SM00822	AL520_RS08610
AL520_RS08615	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08620	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS08645	SM00895	AL520_RS08645
AL520_RS08650	SM00947	Carbonic anhydrase
AL520_RS08685	SM00882	Coenzyme A transferase
AL520_RS08690	SM00882	Coenzyme A transferase
AL520_RS08695	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS08725	SM00052	Putative diguanylate phosphodiesterase
AL520_RS08725	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS08750	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS08780	SM00861	Transketolase, pyrimidine binding domain
AL520_RS08785	SM00822	AL520_RS08785
AL520_RS08790	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08795	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08820	SM00822	AL520_RS08820
AL520_RS08825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS08825	SM00895	AL520_RS08825
AL520_RS08830	SM00858	AL520_RS08830
AL520_RS08875	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS08880	SM01130	AL520_RS08880
AL520_RS08890	SM00382	ATPases associated with a variety of cellular activities
AL520_RS08920	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS08970	SM00421	helix_turn_helix, Lux Regulon
AL520_RS08970	SM00448	cheY-homologous receiver domain
AL520_RS08975	SM00387	Histidine kinase-like ATPases
AL520_RS08975	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS09010	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS09055	SM00232	JAB/MPN domain
AL520_RS09115	SM00382	ATPases associated with a variety of cellular activities
AL520_RS09130	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS09275	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS09570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS09600	SM00155	Phospholipase D. Active site motifs.
AL520_RS09605	SM00382	ATPases associated with a variety of cellular activities
AL520_RS09605	SM01086	C-terminal, D2-small domain, of ClpB protein
AL520_RS09660	SM00487	DEAD-like helicases superfamily
AL520_RS09660	SM00490	helicase superfamily c-terminal domain
AL520_RS09695	SM00387	Histidine kinase-like ATPases
AL520_RS09730	SM00382	ATPases associated with a variety of cellular activities
AL520_RS09740	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL520_RS09755	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS09785	SM00382	ATPases associated with a variety of cellular activities
AL520_RS09835	SM00644	AL520_RS09835
AL520_RS09850	SM00382	ATPases associated with a variety of cellular activities
AL520_RS09850	SM00962	SRP54-type protein, GTPase domain
AL520_RS09850	SM00963	SRP54-type protein, helical bundle domain
AL520_RS09855	SM00257	Lysin motif
AL520_RS09910	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS10035	SM00487	DEAD-like helicases superfamily
AL520_RS10035	SM00490	helicase superfamily c-terminal domain
AL520_RS10040	SM00382	ATPases associated with a variety of cellular activities
AL520_RS10150	SM00382	ATPases associated with a variety of cellular activities
AL520_RS10175	SM00507	HNH nucleases
AL520_RS10245	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL520_RS10245	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL520_RS10245	SM00493	AL520_RS10245
AL520_RS10325	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS10345	SM00100	Cyclic nucleotide-monophosphate binding domain
AL520_RS10345	SM00419	helix_turn_helix, cAMP Regulatory protein
AL520_RS10365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS10365	SM00387	Histidine kinase-like ATPases
AL520_RS10365	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS10390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS10390	SM00895	AL520_RS10390
AL520_RS10500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS10520	SM00822	AL520_RS10520
AL520_RS10560	SM00052	Putative diguanylate phosphodiesterase
AL520_RS10575	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS10590	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS10595	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS10615	SM00450	Rhodanese Homology Domain
AL520_RS10655	SM00267	diguanylate cyclase
AL520_RS10720	SM00382	ATPases associated with a variety of cellular activities
AL520_RS10755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS10765	SM00052	Putative diguanylate phosphodiesterase
AL520_RS10765	SM00267	diguanylate cyclase
AL520_RS10790	SM00984	UDP binding domain
AL520_RS10855	SM00448	cheY-homologous receiver domain
AL520_RS10855	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS10860	SM00387	Histidine kinase-like ATPases
AL520_RS10860	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS10895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS10895	SM00895	AL520_RS10895
AL520_RS10905	SM00563	Phosphate acyltransferases
AL520_RS10935	SM00849	Metallo-beta-lactamase superfamily
AL520_RS10940	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL520_RS10940	SM01232	AL520_RS10940
AL520_RS10945	SM00028	Tetratricopeptide repeats
AL520_RS10955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS10955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS10970	SM01400	AL520_RS10970
AL520_RS11005	SM00487	DEAD-like helicases superfamily
AL520_RS11005	SM00490	helicase superfamily c-terminal domain
AL520_RS11050	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11055	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS11095	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11095	SM00962	SRP54-type protein, GTPase domain
AL520_RS11095	SM00963	SRP54-type protein, helical bundle domain
AL520_RS11100	SM00880	AL520_RS11100
AL520_RS11100	SM01118	AL520_RS11100
AL520_RS11115	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11125	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS11165	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL520_RS11185	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11190	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11235	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS11250	SM00883	Chaperonin 10 Kd subunit
AL520_RS11315	SM00387	Histidine kinase-like ATPases
AL520_RS11315	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS11320	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11320	SM00448	cheY-homologous receiver domain
AL520_RS11340	SM00052	Putative diguanylate phosphodiesterase
AL520_RS11340	SM01034	Sensors of blue-light using FAD
AL520_RS11350	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS11385	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS11385	SM00245	tail specific protease
AL520_RS11400	SM00387	Histidine kinase-like ATPases
AL520_RS11400	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS11400	SM00448	cheY-homologous receiver domain
AL520_RS11410	SM00138	Methyltransferase, chemotaxis proteins 
AL520_RS11420	SM00448	cheY-homologous receiver domain
AL520_RS11510	SM00387	Histidine kinase-like ATPases
AL520_RS11510	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS11510	SM00448	cheY-homologous receiver domain
AL520_RS11530	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL520_RS11545	SM00487	DEAD-like helicases superfamily
AL520_RS11545	SM00490	helicase superfamily c-terminal domain
AL520_RS11555	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11560	SM00382	ATPases associated with a variety of cellular activities
AL520_RS11625	SM01007	Class II Aldolase and Adducin N-terminal domain
AL520_RS11655	SM01130	AL520_RS11655
AL520_RS11670	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS11690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL520_RS11695	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL520_RS11695	SM00267	diguanylate cyclase
AL520_RS11700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS11700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS11720	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS11770	SM01012	AL520_RS11770
AL520_RS11780	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS11790	SM00421	helix_turn_helix, Lux Regulon
AL520_RS11790	SM00448	cheY-homologous receiver domain
AL520_RS11830	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS11930	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS11960	SM00244	prohibitin homologues
AL520_RS11965	SM00052	Putative diguanylate phosphodiesterase
AL520_RS11985	SM00965	Secretin and TonB N terminus short domain
AL520_RS12005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS12005	SM00895	AL520_RS12005
AL520_RS12020	SM00478	endonuclease III
AL520_RS12045	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS12070	SM00155	Phospholipase D. Active site motifs.
AL520_RS12075	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS12105	SM00822	AL520_RS12105
AL520_RS12130	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS12135	SM00873	B3/4 domain
AL520_RS12145	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS12155	SM00919	Malic enzyme, NAD binding domain
AL520_RS12155	SM01274	AL520_RS12155
AL520_RS12215	SM00448	cheY-homologous receiver domain
AL520_RS12220	SM00387	Histidine kinase-like ATPases
AL520_RS12255	SM00257	Lysin motif
AL520_RS12260	SM00382	ATPases associated with a variety of cellular activities
AL520_RS12270	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS12285	SM00344	helix_turn_helix ASNC type
AL520_RS12365	SM00965	Secretin and TonB N terminus short domain
AL520_RS12385	SM00382	ATPases associated with a variety of cellular activities
AL520_RS12400	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS12400	SM00478	endonuclease III
AL520_RS12400	SM01009	AlkA N-terminal domain
AL520_RS12410	SM00014	Acid phosphatase homologues
AL520_RS12435	SM00382	ATPases associated with a variety of cellular activities
AL520_RS12450	SM00567	E-Z type HEAT repeats
AL520_RS12465	SM00796	Allophanate hydrolase subunit 1
AL520_RS12465	SM00797	Allophanate hydrolase subunit 2
AL520_RS12465	SM00878	Biotin carboxylase C-terminal domain
AL520_RS12470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS12470	SM00895	AL520_RS12470
AL520_RS12550	SM00448	cheY-homologous receiver domain
AL520_RS12550	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS12555	SM00387	Histidine kinase-like ATPases
AL520_RS12615	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL520_RS12615	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AL520_RS12620	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AL520_RS12635	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS12645	SM00852	Probable molybdopterin binding domain
AL520_RS12650	SM00852	Probable molybdopterin binding domain
AL520_RS12700	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS12700	SM00876	Biotin and Thiamin Synthesis associated domain
AL520_RS12705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS12705	SM00091	PAS domain
AL520_RS12705	SM00421	helix_turn_helix, Lux Regulon
AL520_RS12750	SM01091	Transporter associated domain
AL520_RS12765	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS12770	SM00014	Acid phosphatase homologues
AL520_RS12775	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL520_RS12795	SM01323	AL520_RS12795
AL520_RS12820	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS12830	SM00903	Flavin reductase like domain
AL520_RS12865	SM00382	ATPases associated with a variety of cellular activities
AL520_RS12915	SM00919	Malic enzyme, NAD binding domain
AL520_RS12915	SM01274	AL520_RS12915
AL520_RS12940	SM00861	Transketolase, pyrimidine binding domain
AL520_RS12945	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL520_RS13005	SM00271	DnaJ molecular chaperone homology domain
AL520_RS13035	SM00852	Probable molybdopterin binding domain
AL520_RS13055	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS13065	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL520_RS13075	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13110	SM00072	Guanylate kinase homologues.
AL520_RS13125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS13125	SM00866	AL520_RS13125
AL520_RS13150	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13155	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13210	SM01001	AIR carboxylase
AL520_RS13225	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS13230	SM00882	Coenzyme A transferase
AL520_RS13235	SM00882	Coenzyme A transferase
AL520_RS13245	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS13250	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS13260	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS13260	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL520_RS13270	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13280	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13285	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13320	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS13395	SM00829	Enoylreductase
AL520_RS13620	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS13690	SM00493	AL520_RS13690
AL520_RS13700	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS13705	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13725	SM00448	cheY-homologous receiver domain
AL520_RS13730	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL520_RS13730	SM00387	Histidine kinase-like ATPases
AL520_RS13730	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS13745	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AL520_RS13750	SM00851	MGS-like domain
AL520_RS13750	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL520_RS13760	SM00822	AL520_RS13760
AL520_RS13765	SM00855	Phosphoglycerate mutase family
AL520_RS13775	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS13800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS13810	SM01103	AL520_RS13810
AL520_RS13820	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13865	SM00382	ATPases associated with a variety of cellular activities
AL520_RS13925	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS13945	SM00028	Tetratricopeptide repeats
AL520_RS13950	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AL520_RS13985	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL520_RS14010	SM00382	ATPases associated with a variety of cellular activities
AL520_RS14020	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS14030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS14030	SM00091	PAS domain
AL520_RS14030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS14040	SM00479	AL520_RS14040
AL520_RS14120	SM00382	ATPases associated with a variety of cellular activities
AL520_RS14120	SM00448	cheY-homologous receiver domain
AL520_RS14125	SM00387	Histidine kinase-like ATPases
AL520_RS14125	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS14160	SM01209	AL520_RS14160
AL520_RS14160	SM01210	AL520_RS14160
AL520_RS14175	SM01329	AL520_RS14175
AL520_RS14200	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS14215	SM00829	Enoylreductase
AL520_RS14255	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS14280	SM00357	Cold shock protein domain
AL520_RS14280	SM00382	ATPases associated with a variety of cellular activities
AL520_RS14280	SM00959	Rho termination factor, N-terminal domain
AL520_RS14290	SM00387	Histidine kinase-like ATPases
AL520_RS14290	SM00433	TopoisomeraseII
AL520_RS14300	SM00434	DNA Topoisomerase IV
AL520_RS14325	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS14385	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL520_RS14415	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS14420	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS14420	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL520_RS14430	SM00382	ATPases associated with a variety of cellular activities
AL520_RS14445	SM00562	AL520_RS14445
AL520_RS14475	SM00564	beta-propeller repeat
AL520_RS14480	SM00382	ATPases associated with a variety of cellular activities
AL520_RS14500	SM00244	prohibitin homologues
AL520_RS14505	SM00244	prohibitin homologues
AL520_RS14515	SM00788	Adenylosuccinate synthetase
AL520_RS14530	SM00400	zinc finger
AL520_RS14530	SM00493	AL520_RS14530
AL520_RS14530	SM00766	DNA primase DnaG DnaB-binding
AL520_RS14630	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS14635	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS14760	SM01252	AL520_RS14760
AL520_RS14855	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS14890	SM00155	Phospholipase D. Active site motifs.
AL520_RS14925	SM01144	AL520_RS14925
AL520_RS14935	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS14935	SM00357	Cold shock protein domain
AL520_RS14935	SM00955	AL520_RS14935
AL520_RS14940	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL520_RS14950	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AL520_RS14955	SM00411	bacterial (prokaryotic) histone like domain
AL520_RS14980	SM00448	cheY-homologous receiver domain
AL520_RS14980	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS14985	SM00387	Histidine kinase-like ATPases
AL520_RS14985	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS15015	SM00448	cheY-homologous receiver domain
AL520_RS15015	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS15020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS15020	SM00387	Histidine kinase-like ATPases
AL520_RS15020	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS15070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS15070	SM00895	AL520_RS15070
AL520_RS15105	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15110	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15155	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15225	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15225	SM00487	DEAD-like helicases superfamily
AL520_RS15225	SM00490	helicase superfamily c-terminal domain
AL520_RS15225	SM00847	Helicase associated domain (HA2)  Add an annotation
AL520_RS15235	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15245	SM00481	DNA polymerase alpha chain like domain
AL520_RS15295	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15310	SM00267	diguanylate cyclase
AL520_RS15315	SM00267	diguanylate cyclase
AL520_RS15325	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS15355	SM01007	Class II Aldolase and Adducin N-terminal domain
AL520_RS15445	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS15450	SM00411	bacterial (prokaryotic) histone like domain
AL520_RS15455	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL520_RS15475	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15520	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15530	SM00354	helix_turn _helix lactose operon repressor
AL520_RS15550	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS15605	SM00895	AL520_RS15605
AL520_RS15645	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15700	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL520_RS15755	SM00465	GIY-YIG type nucleases (URI domain)
AL520_RS15770	SM01329	AL520_RS15770
AL520_RS15810	SM00849	Metallo-beta-lactamase superfamily
AL520_RS15815	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS15905	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL520_RS15910	SM01130	AL520_RS15910
AL520_RS15925	SM00382	ATPases associated with a variety of cellular activities
AL520_RS15930	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS15950	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS16040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS16055	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AL520_RS16065	SM00382	ATPases associated with a variety of cellular activities
AL520_RS16070	SM00382	ATPases associated with a variety of cellular activities
AL520_RS16095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS16095	SM00387	Histidine kinase-like ATPases
AL520_RS16095	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS16100	SM00448	cheY-homologous receiver domain
AL520_RS16100	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS16120	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS16135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS16135	SM00895	AL520_RS16135
AL520_RS16145	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS16165	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS16190	SM00155	Phospholipase D. Active site motifs.
AL520_RS16220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS16230	SM00448	cheY-homologous receiver domain
AL520_RS16245	SM00528	Domain in histone-like proteins of HNS family
AL520_RS16250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS16250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS16275	SM00448	cheY-homologous receiver domain
AL520_RS16275	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS16280	SM00387	Histidine kinase-like ATPases
AL520_RS16280	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS16285	SM00470	ParB-like nuclease domain
AL520_RS16335	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL520_RS16375	SM01130	AL520_RS16375
AL520_RS16390	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AL520_RS16395	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AL520_RS16395	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL520_RS16450	SM00829	Enoylreductase
AL520_RS16490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS16490	SM00895	AL520_RS16490
AL520_RS16505	SM00382	ATPases associated with a variety of cellular activities
AL520_RS16565	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS16585	SM01091	Transporter associated domain
AL520_RS16605	SM00028	Tetratricopeptide repeats
AL520_RS16610	SM00840	AL520_RS16610
AL520_RS16615	SM00478	endonuclease III
AL520_RS16700	SM00387	Histidine kinase-like ATPases
AL520_RS16700	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS16700	SM00448	cheY-homologous receiver domain
AL520_RS16705	SM00052	Putative diguanylate phosphodiesterase
AL520_RS16705	SM00448	cheY-homologous receiver domain
AL520_RS16710	SM00387	Histidine kinase-like ATPases
AL520_RS16710	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS16710	SM00448	cheY-homologous receiver domain
AL520_RS16720	SM00869	Autotransporter beta-domain
AL520_RS16725	SM00450	Rhodanese Homology Domain
AL520_RS16785	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS16805	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS16820	SM00882	Coenzyme A transferase
AL520_RS16825	SM00882	Coenzyme A transferase
AL520_RS16830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS16830	SM00866	AL520_RS16830
AL520_RS16850	SM00382	ATPases associated with a variety of cellular activities
AL520_RS16855	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS16925	SM00421	helix_turn_helix, Lux Regulon
AL520_RS16930	SM00421	helix_turn_helix, Lux Regulon
AL520_RS17050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS17070	SM00318	Staphylococcal nuclease homologues
AL520_RS17090	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17095	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS17135	SM00858	AL520_RS17135
AL520_RS17165	SM00028	Tetratricopeptide repeats
AL520_RS17180	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17195	SM00841	Elongation factor P, C-terminal
AL520_RS17195	SM01185	AL520_RS17195
AL520_RS17265	SM00829	Enoylreductase
AL520_RS17270	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17275	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS17310	SM00895	AL520_RS17310
AL520_RS17320	SM00861	Transketolase, pyrimidine binding domain
AL520_RS17335	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL520_RS17340	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS17345	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17365	SM00858	AL520_RS17365
AL520_RS17380	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS17405	SM00421	helix_turn_helix, Lux Regulon
AL520_RS17415	SM00100	Cyclic nucleotide-monophosphate binding domain
AL520_RS17415	SM00419	helix_turn_helix, cAMP Regulatory protein
AL520_RS17430	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17455	SM00965	Secretin and TonB N terminus short domain
AL520_RS17475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS17515	SM00387	Histidine kinase-like ATPases
AL520_RS17515	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS17520	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17520	SM00448	cheY-homologous receiver domain
AL520_RS17530	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AL520_RS17555	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS17560	SM00829	Enoylreductase
AL520_RS17570	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AL520_RS17605	SM00354	helix_turn _helix lactose operon repressor
AL520_RS17630	SM00869	Autotransporter beta-domain
AL520_RS17635	SM00267	diguanylate cyclase
AL520_RS17650	SM00450	Rhodanese Homology Domain
AL520_RS17655	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS17700	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17715	SM01007	Class II Aldolase and Adducin N-terminal domain
AL520_RS17720	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS17735	SM00965	Secretin and TonB N terminus short domain
AL520_RS17750	SM00912	haemagglutination activity domain
AL520_RS17760	SM00560	LamG-like jellyroll fold domain
AL520_RS17815	SM01116	AL520_RS17815
AL520_RS17820	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17835	SM00421	helix_turn_helix, Lux Regulon
AL520_RS17835	SM00448	cheY-homologous receiver domain
AL520_RS17840	SM00091	PAS domain
AL520_RS17840	SM00387	Histidine kinase-like ATPases
AL520_RS17845	SM00382	ATPases associated with a variety of cellular activities
AL520_RS17875	SM00091	PAS domain
AL520_RS17875	SM00421	helix_turn_helix, Lux Regulon
AL520_RS17905	SM00822	AL520_RS17905
AL520_RS17905	SM00823	Phosphopantetheine attachment site
AL520_RS17905	SM00825	Beta-ketoacyl synthase
AL520_RS17905	SM00826	AL520_RS17905
AL520_RS17905	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AL520_RS17905	SM00829	Enoylreductase
AL520_RS17905	SM01294	AL520_RS17905
AL520_RS17940	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS17975	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS18010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS18055	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18055	SM00930	AL520_RS18055
AL520_RS18085	SM00363	S4 RNA-binding domain
AL520_RS18090	SM00052	Putative diguanylate phosphodiesterase
AL520_RS18090	SM00267	diguanylate cyclase
AL520_RS18110	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18230	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18240	SM00344	helix_turn_helix ASNC type
AL520_RS18270	SM00834	Putative regulatory protein
AL520_RS18275	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS18335	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS18380	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS18385	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS18440	SM00100	Cyclic nucleotide-monophosphate binding domain
AL520_RS18440	SM00419	helix_turn_helix, cAMP Regulatory protein
AL520_RS18450	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18450	SM01086	C-terminal, D2-small domain, of ClpB protein
AL520_RS18530	SM01005	Alanine racemase, C-terminal domain
AL520_RS18535	SM00822	AL520_RS18535
AL520_RS18570	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS18580	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18610	SM01130	AL520_RS18610
AL520_RS18615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS18615	SM00895	AL520_RS18615
AL520_RS18660	SM00822	AL520_RS18660
AL520_RS18705	SM00248	ankyrin repeats
AL520_RS18715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS18715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS18735	SM00357	Cold shock protein domain
AL520_RS18745	SM01359	AL520_RS18745
AL520_RS18745	SM01360	AL520_RS18745
AL520_RS18755	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18755	SM01086	C-terminal, D2-small domain, of ClpB protein
AL520_RS18795	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18800	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18840	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS18855	SM00382	ATPases associated with a variety of cellular activities
AL520_RS18885	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS18925	SM00904	Riboflavin kinase
AL520_RS18955	SM00830	Chorismate mutase type II
AL520_RS18970	SM00965	Secretin and TonB N terminus short domain
AL520_RS18975	SM00965	Secretin and TonB N terminus short domain
AL520_RS18990	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19130	SM01119	AL520_RS19130
AL520_RS19160	SM00357	Cold shock protein domain
AL520_RS19170	SM00357	Cold shock protein domain
AL520_RS19195	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19195	SM00994	ClpX C4-type zinc finger
AL520_RS19195	SM01086	C-terminal, D2-small domain, of ClpB protein
AL520_RS19200	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19200	SM00464	Found in ATP-dependent protease La (LON)
AL520_RS19215	SM00487	DEAD-like helicases superfamily
AL520_RS19215	SM00490	helicase superfamily c-terminal domain
AL520_RS19220	SM00226	Low molecular weight phosphatase family
AL520_RS19245	SM00271	DnaJ molecular chaperone homology domain
AL520_RS19280	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19300	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS19345	SM00822	AL520_RS19345
AL520_RS19360	SM00869	Autotransporter beta-domain
AL520_RS19380	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS19390	SM00387	Histidine kinase-like ATPases
AL520_RS19390	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS19395	SM00448	cheY-homologous receiver domain
AL520_RS19395	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS19420	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19445	SM00965	Secretin and TonB N terminus short domain
AL520_RS19480	SM00028	Tetratricopeptide repeats
AL520_RS19485	SM00869	Autotransporter beta-domain
AL520_RS19505	SM00883	Chaperonin 10 Kd subunit
AL520_RS19565	SM00849	Metallo-beta-lactamase superfamily
AL520_RS19605	SM00481	DNA polymerase alpha chain like domain
AL520_RS19630	SM01211	AL520_RS19630
AL520_RS19635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS19635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS19650	SM00448	cheY-homologous receiver domain
AL520_RS19650	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS19655	SM00387	Histidine kinase-like ATPases
AL520_RS19655	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS19710	SM00912	haemagglutination activity domain
AL520_RS19720	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS19720	SM00448	cheY-homologous receiver domain
AL520_RS19725	SM00387	Histidine kinase-like ATPases
AL520_RS19725	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS19725	SM00448	cheY-homologous receiver domain
AL520_RS19790	SM00477	DNA/RNA non-specific endonuclease
AL520_RS19790	SM00892	DNA/RNA non-specific endonuclease
AL520_RS19805	SM00267	diguanylate cyclase
AL520_RS19830	SM00903	Flavin reductase like domain
AL520_RS19915	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS19920	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS19945	SM00487	DEAD-like helicases superfamily
AL520_RS19945	SM00490	helicase superfamily c-terminal domain
AL520_RS19980	SM00382	ATPases associated with a variety of cellular activities
AL520_RS19985	SM00382	ATPases associated with a variety of cellular activities
AL520_RS20010	SM00422	helix_turn_helix, mercury resistance
AL520_RS20090	SM00869	Autotransporter beta-domain
AL520_RS20100	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL520_RS20100	SM01240	AL520_RS20100
AL520_RS20140	SM00487	DEAD-like helicases superfamily
AL520_RS20165	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS20180	SM00829	Enoylreductase
AL520_RS20185	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL520_RS20195	SM00829	Enoylreductase
AL520_RS20205	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS20225	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS20230	SM00822	AL520_RS20230
AL520_RS20280	SM00422	helix_turn_helix, mercury resistance
AL520_RS20300	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS20355	SM00990	AL520_RS20355
AL520_RS20360	SM00488	AL520_RS20360
AL520_RS20360	SM00491	AL520_RS20360
AL520_RS20390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS20390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS20395	SM00260	Two component signalling adaptor domain
AL520_RS20400	SM00028	Tetratricopeptide repeats
AL520_RS20400	SM00138	Methyltransferase, chemotaxis proteins 
AL520_RS20405	SM00260	Two component signalling adaptor domain
AL520_RS20410	SM00073	Histidine Phosphotransfer domain
AL520_RS20410	SM00260	Two component signalling adaptor domain
AL520_RS20410	SM00387	Histidine kinase-like ATPases
AL520_RS20410	SM00448	cheY-homologous receiver domain
AL520_RS20415	SM00448	cheY-homologous receiver domain
AL520_RS20420	SM00267	diguanylate cyclase
AL520_RS20420	SM00448	cheY-homologous receiver domain
AL520_RS20435	SM00382	ATPases associated with a variety of cellular activities
AL520_RS20445	SM00344	helix_turn_helix ASNC type
AL520_RS20465	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AL520_RS20495	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AL520_RS20505	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS20540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS20540	SM00895	AL520_RS20540
AL520_RS20605	SM01192	AL520_RS20605
AL520_RS20605	SM01193	AL520_RS20605
AL520_RS20795	SM00382	ATPases associated with a variety of cellular activities
AL520_RS20795	SM01086	C-terminal, D2-small domain, of ClpB protein
AL520_RS20905	SM00903	Flavin reductase like domain
AL520_RS20910	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS20925	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS20980	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS21025	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS21085	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS21105	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS21140	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21145	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21155	SM01012	AL520_RS21155
AL520_RS21170	SM00464	Found in ATP-dependent protease La (LON)
AL520_RS21195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS21195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS21210	SM00825	Beta-ketoacyl synthase
AL520_RS21240	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS21255	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21275	SM01400	AL520_RS21275
AL520_RS21300	SM00422	helix_turn_helix, mercury resistance
AL520_RS21310	SM00481	DNA polymerase alpha chain like domain
AL520_RS21340	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS21385	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS21405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL520_RS21445	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS21460	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL520_RS21495	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL520_RS21495	SM01134	AL520_RS21495
AL520_RS21500	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21505	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21535	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS21625	SM00344	helix_turn_helix ASNC type
AL520_RS21710	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21720	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21725	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS21735	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS21770	SM01207	AL520_RS21770
AL520_RS21785	SM00257	Lysin motif
AL520_RS21810	SM00422	helix_turn_helix, mercury resistance
AL520_RS21860	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21875	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21955	SM00382	ATPases associated with a variety of cellular activities
AL520_RS21960	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22005	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS22005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL520_RS22015	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL520_RS22020	SM00954	Region found in RelA / SpoT proteins
AL520_RS22025	SM01409	AL520_RS22025
AL520_RS22030	SM00072	Guanylate kinase homologues.
AL520_RS22045	SM00822	AL520_RS22045
AL520_RS22055	SM00912	haemagglutination activity domain
AL520_RS22120	SM00052	Putative diguanylate phosphodiesterase
AL520_RS22120	SM00267	diguanylate cyclase
AL520_RS22130	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS22135	SM01230	AL520_RS22135
AL520_RS22140	SM00091	PAS domain
AL520_RS22140	SM00387	Histidine kinase-like ATPases
AL520_RS22140	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS22145	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22145	SM00448	cheY-homologous receiver domain
AL520_RS22180	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22235	SM00487	DEAD-like helicases superfamily
AL520_RS22235	SM00490	helicase superfamily c-terminal domain
AL520_RS22250	SM00984	UDP binding domain
AL520_RS22290	SM00656	AL520_RS22290
AL520_RS22305	SM00448	cheY-homologous receiver domain
AL520_RS22305	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS22310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS22310	SM00387	Histidine kinase-like ATPases
AL520_RS22310	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS22325	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22370	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22375	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22430	SM00829	Enoylreductase
AL520_RS22455	SM00091	PAS domain
AL520_RS22455	SM00267	diguanylate cyclase
AL520_RS22465	SM00344	helix_turn_helix ASNC type
AL520_RS22505	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS22510	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22520	SM00448	cheY-homologous receiver domain
AL520_RS22520	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS22545	SM00052	Putative diguanylate phosphodiesterase
AL520_RS22545	SM00448	cheY-homologous receiver domain
AL520_RS22580	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL520_RS22580	SM00091	PAS domain
AL520_RS22580	SM00387	Histidine kinase-like ATPases
AL520_RS22580	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS22580	SM00448	cheY-homologous receiver domain
AL520_RS22595	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22600	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22600	SM00448	cheY-homologous receiver domain
AL520_RS22680	SM00052	Putative diguanylate phosphodiesterase
AL520_RS22735	SM01091	Transporter associated domain
AL520_RS22740	SM00869	Autotransporter beta-domain
AL520_RS22745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS22745	SM00387	Histidine kinase-like ATPases
AL520_RS22745	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS22800	SM00267	diguanylate cyclase
AL520_RS22805	SM00422	helix_turn_helix, mercury resistance
AL520_RS22815	SM00267	diguanylate cyclase
AL520_RS22840	SM00869	Autotransporter beta-domain
AL520_RS22845	SM00671	Sel1-like repeats.
AL520_RS22870	SM00363	S4 RNA-binding domain
AL520_RS22895	SM00530	Helix-turn-helix XRE-family like proteins 
AL520_RS22905	SM00382	ATPases associated with a variety of cellular activities
AL520_RS22910	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23100	SM00419	helix_turn_helix, cAMP Regulatory protein
AL520_RS23120	SM01060	AL520_RS23120
AL520_RS23190	SM00155	Phospholipase D. Active site motifs.
AL520_RS23205	SM00642	Alpha-amylase domain
AL520_RS23210	SM00642	Alpha-amylase domain
AL520_RS23215	SM00642	Alpha-amylase domain
AL520_RS23220	SM00642	Alpha-amylase domain
AL520_RS23225	SM00642	Alpha-amylase domain
AL520_RS23235	SM00642	Alpha-amylase domain
AL520_RS23245	SM00965	Secretin and TonB N terminus short domain
AL520_RS23295	SM00965	Secretin and TonB N terminus short domain
AL520_RS23330	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23365	SM00945	ProQ/FINO family
AL520_RS23375	SM00858	AL520_RS23375
AL520_RS23380	SM01130	AL520_RS23380
AL520_RS23395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS23395	SM00387	Histidine kinase-like ATPases
AL520_RS23395	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS23400	SM00448	cheY-homologous receiver domain
AL520_RS23400	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS23420	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23430	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS23450	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23460	SM01006	Siderophore biosynthesis protein domain
AL520_RS23480	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS23510	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23515	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23525	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS23525	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL520_RS23565	SM00849	Metallo-beta-lactamase superfamily
AL520_RS23575	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL520_RS23585	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS23590	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL520_RS23595	SM00387	Histidine kinase-like ATPases
AL520_RS23595	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS23600	SM00421	helix_turn_helix, Lux Regulon
AL520_RS23600	SM00448	cheY-homologous receiver domain
AL520_RS23625	SM00965	Secretin and TonB N terminus short domain
AL520_RS23655	SM00450	Rhodanese Homology Domain
AL520_RS23660	SM00450	Rhodanese Homology Domain
AL520_RS23685	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23710	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS23715	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS23790	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL520_RS23800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS23800	SM00895	AL520_RS23800
AL520_RS23805	SM01130	AL520_RS23805
AL520_RS23830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS23830	SM00895	AL520_RS23830
AL520_RS23860	SM00382	ATPases associated with a variety of cellular activities
AL520_RS23875	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS23895	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS23920	SM00421	helix_turn_helix, Lux Regulon
AL520_RS23920	SM00448	cheY-homologous receiver domain
AL520_RS23925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL520_RS23925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS23925	SM00387	Histidine kinase-like ATPases
AL520_RS23935	SM00947	Carbonic anhydrase
AL520_RS23940	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS23965	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL520_RS24045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS24070	SM00387	Histidine kinase-like ATPases
AL520_RS24070	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS24075	SM00448	cheY-homologous receiver domain
AL520_RS24075	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS24105	SM00869	Autotransporter beta-domain
AL520_RS24135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS24155	SM00387	Histidine kinase-like ATPases
AL520_RS24155	SM01049	AL520_RS24155
AL520_RS24160	SM00421	helix_turn_helix, Lux Regulon
AL520_RS24160	SM00448	cheY-homologous receiver domain
AL520_RS24185	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS24190	SM00382	ATPases associated with a variety of cellular activities
AL520_RS24200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS24215	SM00869	Autotransporter beta-domain
AL520_RS24230	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL520_RS24240	SM00382	ATPases associated with a variety of cellular activities
AL520_RS24270	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS24275	SM00487	DEAD-like helicases superfamily
AL520_RS24275	SM00490	helicase superfamily c-terminal domain
AL520_RS24305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS24305	SM00091	PAS domain
AL520_RS24305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS24305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS24355	SM00344	helix_turn_helix ASNC type
AL520_RS24390	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL520_RS24405	SM00382	ATPases associated with a variety of cellular activities
AL520_RS24415	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS24415	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL520_RS24420	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS24425	SM00248	ankyrin repeats
AL520_RS24495	SM00267	diguanylate cyclase
AL520_RS24500	SM00244	prohibitin homologues
AL520_RS24515	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS24585	SM00935	Outer membrane protein (OmpH-like)
AL520_RS24595	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS24640	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL520_RS24765	SM00382	ATPases associated with a variety of cellular activities
AL520_RS24815	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS24815	SM00091	PAS domain
AL520_RS24815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS24815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS24820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS24820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS24830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS24830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS24835	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS24835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS24850	SM00047	Lysozyme subfamily 2
AL520_RS24895	SM00858	AL520_RS24895
AL520_RS24925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS24935	SM00448	cheY-homologous receiver domain
AL520_RS24940	SM00448	cheY-homologous receiver domain
AL520_RS24945	SM00138	Methyltransferase, chemotaxis proteins 
AL520_RS24950	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL520_RS24950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS24955	SM00260	Two component signalling adaptor domain
AL520_RS24960	SM00073	Histidine Phosphotransfer domain
AL520_RS24960	SM00260	Two component signalling adaptor domain
AL520_RS24960	SM00387	Histidine kinase-like ATPases
AL520_RS24960	SM01231	AL520_RS24960
AL520_RS24965	SM00448	cheY-homologous receiver domain
AL520_RS25040	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS25040	SM00091	PAS domain
AL520_RS25040	SM00387	Histidine kinase-like ATPases
AL520_RS25040	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS25045	SM00421	helix_turn_helix, Lux Regulon
AL520_RS25045	SM00448	cheY-homologous receiver domain
AL520_RS25095	SM00363	S4 RNA-binding domain
AL520_RS25125	SM01322	AL520_RS25125
AL520_RS25130	SM00382	ATPases associated with a variety of cellular activities
AL520_RS25235	SM00382	ATPases associated with a variety of cellular activities
AL520_RS25255	SM00938	Nitrogen regulatory protein P-II
AL520_RS25290	SM00861	Transketolase, pyrimidine binding domain
AL520_RS25300	SM00965	Secretin and TonB N terminus short domain
AL520_RS25325	SM00422	helix_turn_helix, mercury resistance
AL520_RS25365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS25365	SM00895	AL520_RS25365
AL520_RS25510	SM00354	helix_turn _helix lactose operon repressor
AL520_RS25565	SM00382	ATPases associated with a variety of cellular activities
AL520_RS25615	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS25630	SM00382	ATPases associated with a variety of cellular activities
AL520_RS25640	SM00344	helix_turn_helix ASNC type
AL520_RS25650	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS25680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS25680	SM00866	AL520_RS25680
AL520_RS25700	SM01007	Class II Aldolase and Adducin N-terminal domain
AL520_RS25735	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS25755	SM00822	AL520_RS25755
AL520_RS25805	SM00052	Putative diguanylate phosphodiesterase
AL520_RS25805	SM00091	PAS domain
AL520_RS25805	SM00267	diguanylate cyclase
AL520_RS25820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS25820	SM00895	AL520_RS25820
AL520_RS25840	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL520_RS25875	SM00382	ATPases associated with a variety of cellular activities
AL520_RS25920	SM00986	Uracil DNA glycosylase superfamily
AL520_RS25920	SM00987	UreE urease accessory protein, C-terminal domain 
AL520_RS25930	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL520_RS25930	SM00091	PAS domain
AL520_RS25930	SM00267	diguanylate cyclase
AL520_RS25960	SM00382	ATPases associated with a variety of cellular activities
AL520_RS25990	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL520_RS26005	SM00829	Enoylreductase
AL520_RS26045	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS26070	SM00903	Flavin reductase like domain
AL520_RS26105	SM00822	AL520_RS26105
AL520_RS26145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS26175	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL520_RS26185	SM00100	Cyclic nucleotide-monophosphate binding domain
AL520_RS26215	SM00382	ATPases associated with a variety of cellular activities
AL520_RS26270	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS26310	SM00563	Phosphate acyltransferases
AL520_RS26370	SM00825	Beta-ketoacyl synthase
AL520_RS26380	SM00822	AL520_RS26380
AL520_RS26385	SM00825	Beta-ketoacyl synthase
AL520_RS26425	SM00267	diguanylate cyclase
AL520_RS26430	SM00028	Tetratricopeptide repeats
AL520_RS26455	SM00342	helix_turn_helix, arabinose operon control protein
AL520_RS26485	SM00382	ATPases associated with a variety of cellular activities
AL520_RS26515	SM00382	ATPases associated with a variety of cellular activities
AL520_RS26525	SM00062	Bacterial periplasmic substrate-binding proteins
AL520_RS26575	SM00344	helix_turn_helix ASNC type
AL520_RS26615	SM00248	ankyrin repeats
AL520_RS26655	SM00422	helix_turn_helix, mercury resistance
AL520_RS26660	SM00411	bacterial (prokaryotic) histone like domain
AL520_RS26665	SM00873	B3/4 domain
AL520_RS26665	SM00874	tRNA synthetase B5 domain
AL520_RS26665	SM00896	Ferredoxin-fold anticodon binding domain
AL520_RS26685	SM00382	ATPases associated with a variety of cellular activities
AL520_RS26700	SM00938	Nitrogen regulatory protein P-II
AL520_RS26735	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL520_RS26745	SM00421	helix_turn_helix, Lux Regulon
AL520_RS26745	SM00448	cheY-homologous receiver domain
AL520_RS26750	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS26765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS26765	SM00895	AL520_RS26765
AL520_RS26800	SM00382	ATPases associated with a variety of cellular activities
AL520_RS26820	SM00354	helix_turn _helix lactose operon repressor
AL520_RS26910	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL520_RS26915	SM01329	AL520_RS26915
AL520_RS26940	SM00382	ATPases associated with a variety of cellular activities
AL520_RS26950	SM00421	helix_turn_helix, Lux Regulon
AL520_RS26990	SM00052	Putative diguanylate phosphodiesterase
AL520_RS26990	SM00267	diguanylate cyclase
AL520_RS27005	SM00052	Putative diguanylate phosphodiesterase
AL520_RS27005	SM00267	diguanylate cyclase
AL520_RS27010	SM00052	Putative diguanylate phosphodiesterase
AL520_RS27010	SM00267	diguanylate cyclase
AL520_RS27015	SM00387	Histidine kinase-like ATPases
AL520_RS27015	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS27020	SM00448	cheY-homologous receiver domain
AL520_RS27020	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS27040	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL520_RS27070	SM00240	Forkhead associated domain
AL520_RS27080	SM00858	AL520_RS27080
AL520_RS27485	SM00267	diguanylate cyclase
AL520_RS27670	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL520_RS27670	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL520_RS27715	SM00528	Domain in histone-like proteins of HNS family
AL520_RS27765	SM00670	Large family of predicted nucleotide-binding domains
AL520_RS27780	SM00886	Stress responsive A/B Barrel Domain
AL520_RS27790	SM00382	ATPases associated with a variety of cellular activities
AL520_RS27795	SM00382	ATPases associated with a variety of cellular activities
AL520_RS27800	SM00822	AL520_RS27800
AL520_RS27820	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS27860	SM00881	CoA binding domain
AL520_RS27895	SM00382	ATPases associated with a variety of cellular activities
AL520_RS27900	SM00448	cheY-homologous receiver domain
AL520_RS27900	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS27905	SM00387	Histidine kinase-like ATPases
AL520_RS27905	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS27925	SM00267	diguanylate cyclase
AL520_RS27980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS28005	SM00344	helix_turn_helix ASNC type
AL520_RS28030	SM00382	ATPases associated with a variety of cellular activities
AL520_RS28070	SM00861	Transketolase, pyrimidine binding domain
AL520_RS28125	SM00382	ATPases associated with a variety of cellular activities
AL520_RS28140	SM00450	Rhodanese Homology Domain
AL520_RS28190	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL520_RS28190	SM00474	3'-5' exonuclease
AL520_RS28190	SM00475	5'-3' exonuclease
AL520_RS28190	SM00479	AL520_RS28190
AL520_RS28190	SM00482	DNA polymerase A domain
AL520_RS28245	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS28255	SM00363	S4 RNA-binding domain
AL520_RS28275	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL520_RS28280	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL520_RS28295	SM00448	cheY-homologous receiver domain
AL520_RS28295	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS28300	SM00387	Histidine kinase-like ATPases
AL520_RS28300	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS28305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS28410	SM00479	AL520_RS28410
AL520_RS28445	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL520_RS28465	SM00382	ATPases associated with a variety of cellular activities
AL520_RS28510	SM00893	Electron transfer flavoprotein domain
AL520_RS28515	SM00893	Electron transfer flavoprotein domain
AL520_RS28535	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS28550	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL520_RS28575	SM00411	bacterial (prokaryotic) histone like domain
AL520_RS28580	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS28605	SM00830	Chorismate mutase type II
AL520_RS28615	SM00434	DNA Topoisomerase IV
AL520_RS28740	SM00382	ATPases associated with a variety of cellular activities
AL520_RS28750	SM01209	AL520_RS28750
AL520_RS28765	SM00749	bacterial OsmY and nodulation domain
AL520_RS28810	SM00912	haemagglutination activity domain
AL520_RS28845	SM00822	AL520_RS28845
AL520_RS28860	SM00363	S4 RNA-binding domain
AL520_RS28870	SM00491	AL520_RS28870
AL520_RS28875	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS28875	SM00732	Likely ribonuclease with RNase H fold.
AL520_RS28910	SM00965	Secretin and TonB N terminus short domain
AL520_RS28940	SM00861	Transketolase, pyrimidine binding domain
AL520_RS28945	SM00344	helix_turn_helix ASNC type
AL520_RS28975	SM00861	Transketolase, pyrimidine binding domain
AL520_RS28980	SM00919	Malic enzyme, NAD binding domain
AL520_RS28980	SM01274	AL520_RS28980
AL520_RS29025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL520_RS29025	SM00866	AL520_RS29025
AL520_RS29060	SM00981	AL520_RS29060
AL520_RS29115	SM01192	AL520_RS29115
AL520_RS29115	SM01193	AL520_RS29115
AL520_RS29165	SM00382	ATPases associated with a variety of cellular activities
AL520_RS29185	SM00882	Coenzyme A transferase
AL520_RS29190	SM00882	Coenzyme A transferase
AL520_RS29345	SM00358	Double-stranded RNA binding motif
AL520_RS29345	SM00535	Ribonuclease III family
AL520_RS29355	SM00838	Elongation factor G C-terminus
AL520_RS29360	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL520_RS29385	SM00825	Beta-ketoacyl synthase
AL520_RS29395	SM00822	AL520_RS29395
AL520_RS29400	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AL520_RS29435	SM00644	AL520_RS29435
AL520_RS29455	SM00363	S4 RNA-binding domain
AL520_RS29460	SM00316	Ribosomal protein S1-like RNA-binding domain
AL520_RS29495	SM00954	Region found in RelA / SpoT proteins
AL520_RS29540	SM00478	endonuclease III
AL520_RS29540	SM00525	AL520_RS29540
AL520_RS29545	SM00382	ATPases associated with a variety of cellular activities
AL520_RS29585	SM01022	AL520_RS29585
AL520_RS29590	SM00382	ATPases associated with a variety of cellular activities
AL520_RS29595	SM00382	ATPases associated with a variety of cellular activities
AL520_RS29620	SM00382	ATPases associated with a variety of cellular activities
AL520_RS29645	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL520_RS29645	SM00292	breast cancer carboxy-terminal domain
AL520_RS29645	SM00532	Ligase N family
AL520_RS29650	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AL520_RS29655	SM00968	SMC proteins Flexible Hinge Domain
AL520_RS29665	SM00986	Uracil DNA glycosylase superfamily
AL520_RS29665	SM00987	UreE urease accessory protein, C-terminal domain 
AL520_RS29675	SM00448	cheY-homologous receiver domain
AL520_RS29675	SM00862	Transcriptional regulatory protein, C terminal
AL520_RS29680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL520_RS29680	SM00387	Histidine kinase-like ATPases
AL520_RS29680	SM00388	His Kinase A (phosphoacceptor) domain
AL520_RS29710	SM00487	DEAD-like helicases superfamily
AL520_RS29710	SM00490	helicase superfamily c-terminal domain
AL520_RS29710	SM00982	AL520_RS29710
AL520_RS29710	SM01058	CarD-like/TRCF domain
AL520_RS29780	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AL520_RS29785	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AL520_RS29835	SM00014	Acid phosphatase homologues
AL520_RS29930	SM00346	helix_turn_helix isocitrate lyase regulation
AL520_RS29970	SM00382	ATPases associated with a variety of cellular activities
AL520_RS30115	SM00857	Resolvase, N terminal domain
