AFER_RS00005 SM00382 ATPases associated with a variety of cellular activities AFER_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AFER_RS00010 SM00480 DNA polymerase III beta subunit AFER_RS00020 SM00387 Histidine kinase-like ATPases AFER_RS00020 SM00433 TopoisomeraseII AFER_RS00025 SM00434 DNA Topoisomerase IV AFER_RS00100 SM00495 Chitin-binding domain type 3 AFER_RS00165 SM00530 Helix-turn-helix XRE-family like proteins AFER_RS00210 SM00305 Hint (Hedgehog/Intein) domain C-terminal region AFER_RS00210 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AFER_RS00210 SM00382 ATPases associated with a variety of cellular activities AFER_RS00355 SM01043 Bacterial transcriptional activator domain AFER_RS00390 SM00881 CoA binding domain AFER_RS00400 SM00944 Pro-kumamolisin, activation domain AFER_RS00430 SM00220 Serine/Threonine protein kinases, catalytic domain AFER_RS00430 SM00740 AFER_RS00430 AFER_RS00435 SM00220 Serine/Threonine protein kinases, catalytic domain AFER_RS00435 SM00740 AFER_RS00435 AFER_RS00450 SM00240 Forkhead associated domain AFER_RS00455 SM00240 Forkhead associated domain AFER_RS00500 SM01001 AIR carboxylase AFER_RS00530 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AFER_RS00530 SM00493 AFER_RS00530 AFER_RS00540 SM00829 Enoylreductase AFER_RS00575 SM00859 Semialdehyde dehydrogenase, NAD binding domain AFER_RS00615 SM00961 Ribulose bisphosphate carboxylase, small chain AFER_RS00635 SM00877 AFER_RS00635 AFER_RS00640 SM00877 AFER_RS00640 AFER_RS00645 SM00877 AFER_RS00645 AFER_RS00675 SM00327 von Willebrand factor (vWF) type A domain AFER_RS00715 SM00382 ATPases associated with a variety of cellular activities AFER_RS00830 SM00450 Rhodanese Homology Domain AFER_RS00840 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS00850 SM00861 Transketolase, pyrimidine binding domain AFER_RS00865 SM00354 helix_turn _helix lactose operon repressor AFER_RS00920 SM00421 helix_turn_helix, Lux Regulon AFER_RS00920 SM00448 cheY-homologous receiver domain AFER_RS00925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AFER_RS00925 SM00387 Histidine kinase-like ATPases AFER_RS00970 SM00382 ATPases associated with a variety of cellular activities AFER_RS00995 SM00944 Pro-kumamolisin, activation domain AFER_RS01005 SM00829 Enoylreductase AFER_RS01020 SM00448 cheY-homologous receiver domain AFER_RS01020 SM00862 Transcriptional regulatory protein, C terminal AFER_RS01025 SM00387 Histidine kinase-like ATPases AFER_RS01025 SM00388 His Kinase A (phosphoacceptor) domain AFER_RS01045 SM00382 ATPases associated with a variety of cellular activities AFER_RS01090 SM00073 Histidine Phosphotransfer domain AFER_RS01090 SM00260 Two component signalling adaptor domain AFER_RS01090 SM00387 Histidine kinase-like ATPases AFER_RS01090 SM01231 AFER_RS01090 AFER_RS01095 SM00260 Two component signalling adaptor domain AFER_RS01100 SM00448 cheY-homologous receiver domain AFER_RS01105 SM00138 Methyltransferase, chemotaxis proteins AFER_RS01110 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFER_RS01115 SM00448 cheY-homologous receiver domain AFER_RS01150 SM00267 diguanylate cyclase AFER_RS01160 SM00756 AFER_RS01160 AFER_RS01250 SM00862 Transcriptional regulatory protein, C terminal AFER_RS01255 SM01230 AFER_RS01255 AFER_RS01260 SM01230 AFER_RS01260 AFER_RS01305 SM01004 Delta-aminolevulinic acid dehydratase AFER_RS01345 SM00855 Phosphoglycerate mutase family AFER_RS01370 SM00829 Enoylreductase AFER_RS01395 SM00382 ATPases associated with a variety of cellular activities AFER_RS01415 SM00530 Helix-turn-helix XRE-family like proteins AFER_RS01485 SM00487 DEAD-like helicases superfamily AFER_RS01485 SM00490 helicase superfamily c-terminal domain AFER_RS01580 SM00840 AFER_RS01580 AFER_RS01595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFER_RS01600 SM00327 von Willebrand factor (vWF) type A domain AFER_RS01650 SM00881 CoA binding domain AFER_RS01660 SM00798 AICARFT/IMPCHase bienzyme AFER_RS01660 SM00851 MGS-like domain AFER_RS01700 SM01221 AFER_RS01700 AFER_RS01700 SM01222 AFER_RS01700 AFER_RS01715 SM00382 ATPases associated with a variety of cellular activities AFER_RS01760 SM00421 helix_turn_helix, Lux Regulon AFER_RS01760 SM00448 cheY-homologous receiver domain AFER_RS01775 SM00382 ATPases associated with a variety of cellular activities AFER_RS01815 SM00387 Histidine kinase-like ATPases AFER_RS01820 SM00893 Electron transfer flavoprotein domain AFER_RS01825 SM00893 Electron transfer flavoprotein domain AFER_RS01890 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AFER_RS01895 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AFER_RS01895 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AFER_RS02000 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AFER_RS02000 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AFER_RS02005 SM00649 Ribosomal protein L11/L12 AFER_RS02030 SM00663 RNA polymerase I subunit A N-terminus AFER_RS02045 SM00838 Elongation factor G C-terminus AFER_RS02045 SM00889 Elongation factor G, domain IV AFER_RS02055 SM01403 AFER_RS02055 AFER_RS02075 SM01382 AFER_RS02075 AFER_RS02075 SM01383 AFER_RS02075 AFER_RS02090 SM00322 K homology RNA-binding domain AFER_RS02110 SM01374 AFER_RS02110 AFER_RS02115 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AFER_RS02190 SM00363 S4 RNA-binding domain AFER_RS02190 SM01390 AFER_RS02190 AFER_RS02195 SM00662 RNA polymerases D AFER_RS02250 SM01005 Alanine racemase, C-terminal domain AFER_RS02255 SM00986 Uracil DNA glycosylase superfamily AFER_RS02255 SM00987 UreE urease accessory protein, C-terminal domain AFER_RS02280 SM00883 Chaperonin 10 Kd subunit AFER_RS02360 SM01240 AFER_RS02360 AFER_RS02430 SM00481 DNA polymerase alpha chain like domain AFER_RS02435 SM00116 Domain in cystathionine beta-synthase and other proteins. AFER_RS02435 SM00924 MgtE intracellular N domain AFER_RS02455 SM00861 Transketolase, pyrimidine binding domain AFER_RS02495 SM00852 Probable molybdopterin binding domain AFER_RS02505 SM00834 Putative regulatory protein AFER_RS02585 SM00382 ATPases associated with a variety of cellular activities AFER_RS02590 SM00382 ATPases associated with a variety of cellular activities AFER_RS02605 SM00448 cheY-homologous receiver domain AFER_RS02620 SM00387 Histidine kinase-like ATPases AFER_RS02665 SM00382 ATPases associated with a variety of cellular activities AFER_RS02670 SM00382 ATPases associated with a variety of cellular activities AFER_RS02690 SM00650 Ribosomal RNA adenine dimethylases AFER_RS02720 SM00382 ATPases associated with a variety of cellular activities AFER_RS02840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFER_RS02840 SM00387 Histidine kinase-like ATPases AFER_RS02840 SM00388 His Kinase A (phosphoacceptor) domain AFER_RS02845 SM00448 cheY-homologous receiver domain AFER_RS02845 SM00862 Transcriptional regulatory protein, C terminal AFER_RS02850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFER_RS02870 SM00382 ATPases associated with a variety of cellular activities AFER_RS02930 SM00344 helix_turn_helix ASNC type AFER_RS03190 SM00919 Malic enzyme, NAD binding domain AFER_RS03190 SM01274 AFER_RS03190 AFER_RS03250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFER_RS03270 SM00316 Ribosomal protein S1-like RNA-binding domain AFER_RS03295 SM00904 Riboflavin kinase AFER_RS03300 SM01387 AFER_RS03300 AFER_RS03305 SM00316 Ribosomal protein S1-like RNA-binding domain AFER_RS03305 SM00322 K homology RNA-binding domain AFER_RS03320 SM01130 AFER_RS03320 AFER_RS03325 SM00849 Metallo-beta-lactamase superfamily AFER_RS03330 SM00382 ATPases associated with a variety of cellular activities AFER_RS03330 SM00843 AFER_RS03330 AFER_RS03350 SM00852 Probable molybdopterin binding domain AFER_RS03355 SM00382 ATPases associated with a variety of cellular activities AFER_RS03360 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS03435 SM00382 ATPases associated with a variety of cellular activities AFER_RS03550 SM00974 AFER_RS03550 AFER_RS03595 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AFER_RS03595 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AFER_RS03615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFER_RS03615 SM00387 Histidine kinase-like ATPases AFER_RS03615 SM00388 His Kinase A (phosphoacceptor) domain AFER_RS03620 SM00448 cheY-homologous receiver domain AFER_RS03620 SM00862 Transcriptional regulatory protein, C terminal AFER_RS03630 SM00849 Metallo-beta-lactamase superfamily AFER_RS03680 SM00822 AFER_RS03680 AFER_RS03700 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS03710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFER_RS03720 SM01018 B12 binding domain AFER_RS03745 SM00450 Rhodanese Homology Domain AFER_RS03755 SM00878 Biotin carboxylase C-terminal domain AFER_RS03880 SM00014 Acid phosphatase homologues AFER_RS03925 SM00382 ATPases associated with a variety of cellular activities AFER_RS03925 SM00994 ClpX C4-type zinc finger AFER_RS03925 SM01086 C-terminal, D2-small domain, of ClpB protein AFER_RS03935 SM00562 AFER_RS03935 AFER_RS03985 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AFER_RS04000 SM00382 ATPases associated with a variety of cellular activities AFER_RS04005 SM00382 ATPases associated with a variety of cellular activities AFER_RS04030 SM00382 ATPases associated with a variety of cellular activities AFER_RS04195 SM00849 Metallo-beta-lactamase superfamily AFER_RS04215 SM00327 von Willebrand factor (vWF) type A domain AFER_RS04215 SM00382 ATPases associated with a variety of cellular activities AFER_RS04220 SM00986 Uracil DNA glycosylase superfamily AFER_RS04220 SM00987 UreE urease accessory protein, C-terminal domain AFER_RS04230 SM00052 Putative diguanylate phosphodiesterase AFER_RS04230 SM00267 diguanylate cyclase AFER_RS04240 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AFER_RS04240 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AFER_RS04255 SM00861 Transketolase, pyrimidine binding domain AFER_RS04355 SM00382 ATPases associated with a variety of cellular activities AFER_RS04360 SM00465 GIY-YIG type nucleases (URI domain) AFER_RS04380 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFER_RS04400 SM00091 PAS domain AFER_RS04455 SM00479 AFER_RS04455 AFER_RS04490 SM00220 Serine/Threonine protein kinases, catalytic domain AFER_RS04495 SM01230 AFER_RS04495 AFER_RS04505 SM00331 Sigma factor PP2C-like phosphatases AFER_RS04505 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AFER_RS04530 SM01120 AFER_RS04530 AFER_RS04590 SM00382 ATPases associated with a variety of cellular activities AFER_RS04605 SM00880 AFER_RS04605 AFER_RS04615 SM01133 AFER_RS04615 AFER_RS04640 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS04665 SM00650 Ribosomal RNA adenine dimethylases AFER_RS04675 SM00382 ATPases associated with a variety of cellular activities AFER_RS04730 SM00487 DEAD-like helicases superfamily AFER_RS04730 SM00490 helicase superfamily c-terminal domain AFER_RS04730 SM01142 AFER_RS04730 AFER_RS04840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFER_RS04875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFER_RS04875 SM00954 Region found in RelA / SpoT proteins AFER_RS04895 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AFER_RS04900 SM00732 Likely ribonuclease with RNase H fold. AFER_RS04985 SM00893 Electron transfer flavoprotein domain AFER_RS04990 SM00893 Electron transfer flavoprotein domain AFER_RS05055 SM01101 AFER_RS05055 AFER_RS05080 SM00487 DEAD-like helicases superfamily AFER_RS05090 SM00382 ATPases associated with a variety of cellular activities AFER_RS05105 SM00354 helix_turn _helix lactose operon repressor AFER_RS05150 SM01118 AFER_RS05150 AFER_RS05175 SM00829 Enoylreductase AFER_RS05190 SM00487 DEAD-like helicases superfamily AFER_RS05190 SM00490 helicase superfamily c-terminal domain AFER_RS05195 SM00450 Rhodanese Homology Domain AFER_RS05195 SM00849 Metallo-beta-lactamase superfamily AFER_RS05255 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AFER_RS05260 SM00450 Rhodanese Homology Domain AFER_RS05290 SM00878 Biotin carboxylase C-terminal domain AFER_RS05315 SM00347 helix_turn_helix multiple antibiotic resistance protein AFER_RS05350 SM00382 ATPases associated with a variety of cellular activities AFER_RS05375 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS05385 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS05410 SM00382 ATPases associated with a variety of cellular activities AFER_RS05415 SM00382 ATPases associated with a variety of cellular activities AFER_RS05515 SM00382 ATPases associated with a variety of cellular activities AFER_RS05530 SM00316 Ribosomal protein S1-like RNA-binding domain AFER_RS05535 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AFER_RS05535 SM00475 5'-3' exonuclease AFER_RS05535 SM00482 DNA polymerase A domain AFER_RS05540 SM00448 cheY-homologous receiver domain AFER_RS05540 SM01012 AFER_RS05540 AFER_RS05545 SM00849 Metallo-beta-lactamase superfamily AFER_RS05565 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AFER_RS05575 SM00822 AFER_RS05575 AFER_RS05585 SM00825 Beta-ketoacyl synthase AFER_RS05600 SM01350 AFER_RS05600 AFER_RS05630 SM00448 cheY-homologous receiver domain AFER_RS05630 SM00862 Transcriptional regulatory protein, C terminal AFER_RS05635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFER_RS05635 SM00387 Histidine kinase-like ATPases AFER_RS05635 SM00388 His Kinase A (phosphoacceptor) domain AFER_RS05640 SM00052 Putative diguanylate phosphodiesterase AFER_RS05640 SM00267 diguanylate cyclase AFER_RS05660 SM00883 Chaperonin 10 Kd subunit AFER_RS05760 SM00240 Forkhead associated domain AFER_RS05765 SM00422 helix_turn_helix, mercury resistance AFER_RS05815 SM00382 ATPases associated with a variety of cellular activities AFER_RS05825 SM00363 S4 RNA-binding domain AFER_RS05830 SM00014 Acid phosphatase homologues AFER_RS05870 SM00382 ATPases associated with a variety of cellular activities AFER_RS05920 SM00052 Putative diguanylate phosphodiesterase AFER_RS05920 SM00267 diguanylate cyclase AFER_RS06030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFER_RS06030 SM00450 Rhodanese Homology Domain AFER_RS06035 SM00448 cheY-homologous receiver domain AFER_RS06035 SM00862 Transcriptional regulatory protein, C terminal AFER_RS06040 SM00387 Histidine kinase-like ATPases AFER_RS06040 SM00388 His Kinase A (phosphoacceptor) domain AFER_RS06175 SM00881 CoA binding domain AFER_RS06205 SM00382 ATPases associated with a variety of cellular activities AFER_RS06220 SM00363 S4 RNA-binding domain AFER_RS06250 SM00382 ATPases associated with a variety of cellular activities AFER_RS06255 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AFER_RS06310 SM00382 ATPases associated with a variety of cellular activities AFER_RS06310 SM00838 Elongation factor G C-terminus AFER_RS06310 SM00889 Elongation factor G, domain IV AFER_RS06330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AFER_RS06360 SM00518 AP endonuclease family 2 AFER_RS06390 SM00864 Tubulin/FtsZ family, GTPase domain AFER_RS06390 SM00865 Tubulin/FtsZ family, C-terminal domain AFER_RS06485 SM00014 Acid phosphatase homologues AFER_RS06495 SM00400 zinc finger AFER_RS06495 SM00493 AFER_RS06495 AFER_RS06535 SM00116 Domain in cystathionine beta-synthase and other proteins. AFER_RS06535 SM01091 Transporter associated domain AFER_RS06560 SM00858 AFER_RS06560 AFER_RS06570 SM00849 Metallo-beta-lactamase superfamily AFER_RS06575 SM00382 ATPases associated with a variety of cellular activities AFER_RS06645 SM00530 Helix-turn-helix XRE-family like proteins AFER_RS06655 SM00271 DnaJ molecular chaperone homology domain AFER_RS06670 SM00838 Elongation factor G C-terminus AFER_RS06735 SM00382 ATPases associated with a variety of cellular activities AFER_RS06820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFER_RS06820 SM00895 AFER_RS06820 AFER_RS06825 SM00382 ATPases associated with a variety of cellular activities AFER_RS06830 SM00642 Alpha-amylase domain AFER_RS06850 SM00354 helix_turn _helix lactose operon repressor AFER_RS06880 SM00478 endonuclease III AFER_RS06885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFER_RS06925 SM00849 Metallo-beta-lactamase superfamily AFER_RS06985 SM00363 S4 RNA-binding domain AFER_RS07025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFER_RS07120 SM00382 ATPases associated with a variety of cellular activities AFER_RS07200 SM00487 DEAD-like helicases superfamily AFER_RS07200 SM00490 helicase superfamily c-terminal domain AFER_RS07380 SM00563 Phosphate acyltransferases AFER_RS07430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFER_RS07460 SM00822 AFER_RS07460 AFER_RS07470 SM00421 helix_turn_helix, Lux Regulon AFER_RS07470 SM00448 cheY-homologous receiver domain AFER_RS07550 SM00487 DEAD-like helicases superfamily AFER_RS07550 SM00490 helicase superfamily c-terminal domain AFER_RS07555 SM00478 endonuclease III AFER_RS07600 SM00052 Putative diguanylate phosphodiesterase AFER_RS07600 SM00267 diguanylate cyclase AFER_RS07630 SM01001 AIR carboxylase AFER_RS07680 SM00858 AFER_RS07680 AFER_RS07770 SM00382 ATPases associated with a variety of cellular activities AFER_RS07770 SM00962 SRP54-type protein, GTPase domain AFER_RS07770 SM00963 SRP54-type protein, helical bundle domain AFER_RS07775 SM00382 ATPases associated with a variety of cellular activities AFER_RS07775 SM00962 SRP54-type protein, GTPase domain AFER_RS07775 SM00963 SRP54-type protein, helical bundle domain AFER_RS07800 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AFER_RS07800 SM01232 AFER_RS07800 AFER_RS07805 SM00358 Double-stranded RNA binding motif AFER_RS07805 SM00535 Ribonuclease III family AFER_RS07840 SM00487 DEAD-like helicases superfamily AFER_RS07840 SM00490 helicase superfamily c-terminal domain AFER_RS07845 SM01120 AFER_RS07845 AFER_RS07845 SM01121 AFER_RS07845 AFER_RS07890 SM00052 Putative diguanylate phosphodiesterase AFER_RS07890 SM00267 diguanylate cyclase AFER_RS07915 SM00917 LeuA allosteric (dimerisation) domain AFER_RS07950 SM01329 AFER_RS07950 AFER_RS07960 SM00917 LeuA allosteric (dimerisation) domain AFER_RS08030 SM00845 GatB domain AFER_RS08050 SM00220 Serine/Threonine protein kinases, catalytic domain AFER_RS08050 SM00740 AFER_RS08050 AFER_RS08055 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AFER_RS08055 SM00292 breast cancer carboxy-terminal domain AFER_RS08055 SM00532 Ligase N family AFER_RS08120 SM00327 von Willebrand factor (vWF) type A domain AFER_RS08125 SM00382 ATPases associated with a variety of cellular activities AFER_RS08130 SM01092 CO dehydrogenase flavoprotein C-terminal domain AFER_RS08135 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFER_RS08150 SM00244 prohibitin homologues AFER_RS08165 SM00382 ATPases associated with a variety of cellular activities AFER_RS08175 SM00448 cheY-homologous receiver domain AFER_RS08175 SM00862 Transcriptional regulatory protein, C terminal AFER_RS08220 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFER_RS08240 SM01192 AFER_RS08240 AFER_RS08240 SM01193 AFER_RS08240 AFER_RS08260 SM00487 DEAD-like helicases superfamily AFER_RS08260 SM00490 helicase superfamily c-terminal domain AFER_RS08260 SM00982 AFER_RS08260 AFER_RS08260 SM01058 CarD-like/TRCF domain AFER_RS08275 SM01400 AFER_RS08275 AFER_RS08325 SM00382 ATPases associated with a variety of cellular activities AFER_RS08350 SM00481 DNA polymerase alpha chain like domain AFER_RS08365 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFER_RS08365 SM00866 AFER_RS08365 AFER_RS08370 SM00341 Helicase and RNase D C-terminal AFER_RS08370 SM00474 3'-5' exonuclease AFER_RS08440 SM00822 AFER_RS08440 AFER_RS08490 SM00481 DNA polymerase alpha chain like domain AFER_RS08540 SM00857 Resolvase, N terminal domain AFER_RS08625 SM00859 Semialdehyde dehydrogenase, NAD binding domain AFER_RS08650 SM00460 Transglutaminase/protease-like homologues AFER_RS08670 SM00873 B3/4 domain AFER_RS08670 SM00874 tRNA synthetase B5 domain AFER_RS08670 SM00896 Ferredoxin-fold anticodon binding domain AFER_RS08680 SM00967 RNA 2'-O ribose methyltransferase substrate binding AFER_RS08735 SM00852 Probable molybdopterin binding domain AFER_RS08775 SM01409 AFER_RS08775 AFER_RS08780 SM00072 Guanylate kinase homologues. AFER_RS08790 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AFER_RS08800 SM00851 MGS-like domain AFER_RS08800 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AFER_RS08805 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AFER_RS08865 SM00841 Elongation factor P, C-terminal AFER_RS08865 SM01185 AFER_RS08865 AFER_RS08905 SM00347 helix_turn_helix multiple antibiotic resistance protein AFER_RS08910 SM00867 YceI-like domain AFER_RS08925 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS08950 SM00861 Transketolase, pyrimidine binding domain AFER_RS08960 SM00046 Diacylglycerol kinase catalytic domain (presumed) AFER_RS08995 SM00822 AFER_RS08995 AFER_RS09025 SM00382 ATPases associated with a variety of cellular activities AFER_RS09060 SM00232 JAB/MPN domain AFER_RS09095 SM00382 ATPases associated with a variety of cellular activities AFER_RS09100 SM00937 AFER_RS09100 AFER_RS09105 SM00957 SecA DEAD-like domain AFER_RS09105 SM00958 SecA preprotein cross-linking domain AFER_RS09115 SM00996 S-adenosyl-L-homocysteine hydrolase AFER_RS09115 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AFER_RS09180 SM00642 Alpha-amylase domain AFER_RS09230 SM00829 Enoylreductase AFER_RS09270 SM00382 ATPases associated with a variety of cellular activities AFER_RS09335 SM00937 AFER_RS09335 AFER_RS09350 SM00357 Cold shock protein domain AFER_RS09350 SM00382 ATPases associated with a variety of cellular activities AFER_RS09370 SM00836 DALR anticodon binding domain AFER_RS09370 SM01016 Arginyl tRNA synthetase N terminal dom AFER_RS09400 SM00829 Enoylreductase AFER_RS09505 SM00930 AFER_RS09505 AFER_RS09525 SM00382 ATPases associated with a variety of cellular activities AFER_RS09570 SM00729 Elongator protein 3, MiaB family, Radical SAM AFER_RS09590 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFER_RS09635 SM00382 ATPases associated with a variety of cellular activities AFER_RS09660 SM00670 Large family of predicted nucleotide-binding domains AFER_RS09690 SM01007 Class II Aldolase and Adducin N-terminal domain AFER_RS09700 SM00347 helix_turn_helix multiple antibiotic resistance protein AFER_RS09715 SM00382 ATPases associated with a variety of cellular activities AFER_RS09725 SM01329 AFER_RS09725 AFER_RS09815 SM00967 RNA 2'-O ribose methyltransferase substrate binding AFER_RS09825 SM01058 CarD-like/TRCF domain AFER_RS09835 SM00382 ATPases associated with a variety of cellular activities AFER_RS09835 SM01086 C-terminal, D2-small domain, of ClpB protein AFER_RS09875 SM00905 Dihydroneopterin aldolase AFER_RS09930 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AFER_RS09930 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AFER_RS09930 SM00493 AFER_RS09930 AFER_RS09985 SM00530 Helix-turn-helix XRE-family like proteins AFER_RS09990 SM00382 ATPases associated with a variety of cellular activities AFER_RS10045 SM00481 DNA polymerase alpha chain like domain AFER_RS10085 SM00919 Malic enzyme, NAD binding domain AFER_RS10085 SM01274 AFER_RS10085 AFER_RS10115 SM01211 AFER_RS10115 AFER_RS10130 SM00998 Adenylosuccinate lyase C-terminus AFER_RS10135 SM01209 AFER_RS10135 AFER_RS10135 SM01210 AFER_RS10135 AFER_RS10140 SM00788 Adenylosuccinate synthetase AFER_RS10145 SM00855 Phosphoglycerate mutase family AFER_RS10160 SM00271 DnaJ molecular chaperone homology domain AFER_RS10165 SM00422 helix_turn_helix, mercury resistance AFER_RS10170 SM00382 ATPases associated with a variety of cellular activities AFER_RS10170 SM01086 C-terminal, D2-small domain, of ClpB protein AFER_RS10185 SM01230 AFER_RS10185 AFER_RS10250 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AFER_RS10250 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AFER_RS10255 SM00421 helix_turn_helix, Lux Regulon AFER_RS10255 SM00448 cheY-homologous receiver domain AFER_RS10270 SM01329 AFER_RS10270 AFER_RS10305 SM00849 Metallo-beta-lactamase superfamily AFER_RS10320 SM00450 Rhodanese Homology Domain AFER_RS10380 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFER_RS10400 SM00422 helix_turn_helix, mercury resistance AFER_RS10490 SM00346 helix_turn_helix isocitrate lyase regulation AFER_RS10515 SM00382 ATPases associated with a variety of cellular activities AFER_RS10520 SM00470 ParB-like nuclease domain AFER_RS10595 SM00052 Putative diguanylate phosphodiesterase AFER_RS10640 SM00347 helix_turn_helix multiple antibiotic resistance protein AFER_RS10645 SM00331 Sigma factor PP2C-like phosphatases AFER_RS10645 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AFER_RS10650 SM00382 ATPases associated with a variety of cellular activities AFER_RS10685 SM00267 diguanylate cyclase AFER_RS10705 SM00448 cheY-homologous receiver domain AFER_RS10805 SM00347 helix_turn_helix multiple antibiotic resistance protein AFER_RS10835 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AFER_RS10865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFER_RS10865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFER_RS11000 SM00267 diguanylate cyclase AFER_RS11025 SM00855 Phosphoglycerate mutase family AFER_RS11030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AFER_RS11030 SM00267 diguanylate cyclase AFER_RS11090 SM00900 AFER_RS11090 AFER_RS11095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFER_RS11100 SM00563 Phosphate acyltransferases AFER_RS11110 SM00052 Putative diguanylate phosphodiesterase AFER_RS11110 SM00267 diguanylate cyclase AFER_RS11145 SM00052 Putative diguanylate phosphodiesterase AFER_RS11150 SM00052 Putative diguanylate phosphodiesterase AFER_RS11175 SM00465 GIY-YIG type nucleases (URI domain) AFER_RS11175 SM00479 AFER_RS11175 AFER_RS11180 SM00267 diguanylate cyclase AFER_RS11215 SM00382 ATPases associated with a variety of cellular activities AFER_RS11215 SM00387 Histidine kinase-like ATPases AFER_RS11215 SM00388 His Kinase A (phosphoacceptor) domain AFER_RS11290 SM00052 Putative diguanylate phosphodiesterase AFER_RS11325 SM00567 E-Z type HEAT repeats AFER_RS11370 SM00637 AFER_RS11370 AFER_RS11370 SM01063 Carbohydrate binding domain CBM49 AFER_RS11380 SM00393 Putative single-stranded nucleic acids-binding domain AFER_RS11380 SM01245 AFER_RS11380