locus-tag class description PACID_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix PACID_RS00005 PF00308 Bacterial dnaA protein PACID_RS00010 PF12704 MacB-like periplasmic core domain PACID_RS00010 PF02687 FtsX-like permease family PACID_RS00010 PF00005 ABC transporter PACID_RS00015 PF12704 MacB-like periplasmic core domain PACID_RS00015 PF02687 FtsX-like permease family PACID_RS00015 PF00005 ABC transporter PACID_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain PACID_RS00020 PF02767 DNA polymerase III beta subunit, central domain PACID_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain PACID_RS00030 PF02463 RecF/RecN/SMC N terminal domain PACID_RS00035 PF05258 Dna[CI] antecedent, DciA PACID_RS00045 PF01751 Toprim domain PACID_RS00045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS00045 PF00986 DNA gyrase B subunit, carboxyl terminus PACID_RS00045 PF00204 DNA gyrase B PACID_RS00050 PF00521 DNA gyrase/topoisomerase IV, subunit A PACID_RS00050 PF03989 DNA gyrase C-terminal domain, beta-propeller PACID_RS00055 PF12089 Transmembrane domain of unknown function (DUF3566) PACID_RS00060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS00060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS00065 PF00356 Bacterial regulatory proteins, lacI family PACID_RS00070 PF00005 ABC transporter PACID_RS00075 PF02653 Branched-chain amino acid transport system / permease component PACID_RS00080 PF13407 Periplasmic binding protein domain PACID_RS00085 PF00294 pfkB family carbohydrate kinase PACID_RS00090 PF05025 RbsD / FucU transport protein family PACID_RS00095 PF01061 ABC-2 type transporter PACID_RS00100 PF00005 ABC transporter PACID_RS00100 PF13732 Domain of unknown function (DUF4162) PACID_RS00130 PF13744 Helix-turn-helix domain PACID_RS00135 PF01850 PIN domain PACID_RS00140 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PACID_RS00155 PF03600 Citrate transporter PACID_RS00165 PF13350 Tyrosine phosphatase family PACID_RS00170 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_RS00170 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_RS00175 PF16353 Domain of unknown function(DUF4981) PACID_RS00175 PF02929 Beta galactosidase small chain PACID_RS00175 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_RS00175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PACID_RS00180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_RS00180 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_RS00180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_RS00185 PF03949 Malic enzyme, NAD binding domain PACID_RS00185 PF00390 Malic enzyme, N-terminal domain PACID_RS00190 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_RS00190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_RS00195 PF00682 HMGL-like PACID_RS00195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_RS00195 PF00364 Biotin-requiring enzyme PACID_RS00195 PF00289 Biotin carboxylase, N-terminal domain PACID_RS00195 PF02785 Biotin carboxylase C-terminal domain PACID_RS00195 PF02436 Conserved carboxylase domain PACID_RS00215 PF13597 Anaerobic ribonucleoside-triphosphate reductase PACID_RS00215 PF03477 ATP cone domain PACID_RS00220 PF04055 Radical SAM superfamily PACID_RS00280 PF00005 ABC transporter PACID_RS00290 PF17863 AAA lid domain PACID_RS00290 PF07726 ATPase family associated with various cellular activities (AAA) PACID_RS00345 PF00872 Transposase, Mutator family PACID_RS00365 PF05973 Phage derived protein Gp49-like (DUF891) PACID_RS00380 PF00005 ABC transporter PACID_RS00385 PF01032 FecCD transport family PACID_RS00405 PF01522 Polysaccharide deacetylase PACID_RS00415 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_RS00425 PF00107 Zinc-binding dehydrogenase PACID_RS00425 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS00430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_RS00435 PF03611 PTS system sugar-specific permease component PACID_RS00445 PF03852 DNA mismatch endonuclease Vsr PACID_RS00450 PF00145 C-5 cytosine-specific DNA methylase PACID_RS00455 PF09126 Restriction endonuclease NaeI PACID_RS00460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS00460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS00465 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PACID_RS00465 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PACID_RS00485 PF00005 ABC transporter PACID_RS00495 PF10437 Bacterial lipoate protein ligase C-terminus PACID_RS00495 PF03099 Biotin/lipoate A/B protein ligase family PACID_RS00500 PF03952 Enolase, N-terminal domain PACID_RS00500 PF00113 Enolase, C-terminal TIM barrel domain PACID_RS00505 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS00510 PF00005 ABC transporter PACID_RS00515 PF00155 Aminotransferase class I and II PACID_RS00525 PF01547 Bacterial extracellular solute-binding protein PACID_RS00530 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS00535 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS00540 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase PACID_RS00560 PF01380 SIS domain PACID_RS00590 PF00437 Type II/IV secretion system protein PACID_RS00625 PF00171 Aldehyde dehydrogenase family PACID_RS00640 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_RS00640 PF02558 Ketopantoate reductase PanE/ApbA PACID_RS00670 PF01268 Formate--tetrahydrofolate ligase PACID_RS00695 PF00005 ABC transporter PACID_RS00700 PF00196 Bacterial regulatory proteins, luxR family PACID_RS00700 PF00072 Response regulator receiver domain PACID_RS00710 PF01381 Helix-turn-helix PACID_RS00715 PF05973 Phage derived protein Gp49-like (DUF891) PACID_RS00720 PF01139 tRNA-splicing ligase RtcB PACID_RS00725 PF07690 Major Facilitator Superfamily PACID_RS00730 PF00005 ABC transporter PACID_RS00730 PF00664 ABC transporter transmembrane region PACID_RS00750 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase PACID_RS00760 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS00760 PF00672 HAMP domain PACID_RS00765 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase PACID_RS00770 PF07730 Histidine kinase PACID_RS00780 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS00780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS00780 PF00672 HAMP domain PACID_RS00785 PF00072 Response regulator receiver domain PACID_RS00785 PF00486 Transcriptional regulatory protein, C terminal PACID_RS00795 PF07732 Multicopper oxidase PACID_RS00795 PF07731 Multicopper oxidase PACID_RS00795 PF00394 Multicopper oxidase PACID_RS00815 PF00578 AhpC/TSA family PACID_RS00820 PF01370 NAD dependent epimerase/dehydratase family PACID_RS00825 PF01507 Phosphoadenosine phosphosulfate reductase family PACID_RS00830 PF01507 Phosphoadenosine phosphosulfate reductase family PACID_RS00835 PF00009 Elongation factor Tu GTP binding domain PACID_RS00840 PF01925 Sulfite exporter TauE/SafE PACID_RS00855 PF07687 Peptidase dimerisation domain PACID_RS00855 PF01546 Peptidase family M20/M25/M40 PACID_RS00865 PF00248 Aldo/keto reductase family PACID_RS00900 PF03330 Lytic transglycolase PACID_RS00905 PF12697 Alpha/beta hydrolase family PACID_RS00915 PF05690 Thiazole biosynthesis protein ThiG PACID_RS00920 PF00899 ThiF family PACID_RS00920 PF00581 Rhodanese-like domain PACID_RS00930 PF14310 Fibronectin type III-like domain PACID_RS00930 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_RS00930 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_RS00935 PF00440 Bacterial regulatory proteins, tetR family PACID_RS00940 PF03176 MMPL family PACID_RS00950 PF13439 Glycosyltransferase Family 4 PACID_RS00950 PF00534 Glycosyl transferases group 1 PACID_RS00960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_RS00960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_RS00965 PF00905 Penicillin binding protein transpeptidase domain PACID_RS00965 PF00912 Transglycosylase PACID_RS00975 PF07690 Major Facilitator Superfamily PACID_RS00985 PF07690 Major Facilitator Superfamily PACID_RS00990 PF06965 Na+/H+ antiporter 1 PACID_RS00995 PF01566 Natural resistance-associated macrophage protein PACID_RS01000 PF00950 ABC 3 transport family PACID_RS01000 PF02742 Iron dependent repressor, metal binding and dimerisation domain PACID_RS01015 PF00390 Malic enzyme, N-terminal domain PACID_RS01015 PF03949 Malic enzyme, NAD binding domain PACID_RS01035 PF00708 Acylphosphatase PACID_RS01040 PF13607 Succinyl-CoA ligase like flavodoxin domain PACID_RS01040 PF13380 CoA binding domain PACID_RS01045 PF01039 Carboxyl transferase domain PACID_RS01060 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit PACID_RS01065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_RS01065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_RS01065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_RS01065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_RS01075 PF00005 ABC transporter PACID_RS01080 PF00171 Aldehyde dehydrogenase family PACID_RS01100 PF00365 Phosphofructokinase PACID_RS01105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_RS01110 PF00005 ABC transporter PACID_RS01110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS01115 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_RS01115 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS01140 PF04343 Protein of unknown function, DUF488 PACID_RS01150 PF00403 Heavy-metal-associated domain PACID_RS01160 PF00027 Cyclic nucleotide-binding domain PACID_RS01160 PF13545 Crp-like helix-turn-helix domain PACID_RS01165 PF00210 Ferritin-like domain PACID_RS01220 PF13409 Glutathione S-transferase, N-terminal domain PACID_RS01230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS01230 PF00005 ABC transporter PACID_RS01235 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS01245 PF03459 TOBE domain PACID_RS01245 PF00005 ABC transporter PACID_RS01255 PF03459 TOBE domain PACID_RS01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_RS01270 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PACID_RS01275 PF12804 MobA-like NTP transferase domain PACID_RS01280 PF03063 Prismane/CO dehydrogenase family PACID_RS01285 PF00970 Oxidoreductase FAD-binding domain PACID_RS01285 PF00111 2Fe-2S iron-sulfur cluster binding domain PACID_RS01285 PF00175 Oxidoreductase NAD-binding domain PACID_RS01290 PF01613 Flavin reductase like domain PACID_RS01295 PF00067 Cytochrome P450 PACID_RS01300 PF07690 Major Facilitator Superfamily PACID_RS01310 PF07690 Major Facilitator Superfamily PACID_RS01315 PF01568 Molydopterin dinucleotide binding domain PACID_RS01315 PF00384 Molybdopterin oxidoreductase PACID_RS01320 PF14711 Respiratory nitrate reductase beta C-terminal PACID_RS01320 PF13247 4Fe-4S dicluster domain PACID_RS01325 PF02665 Nitrate reductase gamma subunit PACID_RS01325 PF00384 Molybdopterin oxidoreductase PACID_RS01325 PF02613 Nitrate reductase delta subunit PACID_RS01330 PF02613 Nitrate reductase delta subunit PACID_RS01330 PF02665 Nitrate reductase gamma subunit PACID_RS01330 PF00384 Molybdopterin oxidoreductase PACID_RS01340 PF04055 Radical SAM superfamily PACID_RS01340 PF06463 Molybdenum Cofactor Synthesis C PACID_RS01350 PF02391 MoaE protein PACID_RS01355 PF03454 MoeA C-terminal region (domain IV) PACID_RS01355 PF03453 MoeA N-terminal region (domain I and II) PACID_RS01355 PF00994 Probable molybdopterin binding domain PACID_RS01360 PF01967 MoaC family PACID_RS01365 PF01967 MoaC family PACID_RS01365 PF00994 Probable molybdopterin binding domain PACID_RS01375 PF08543 Phosphomethylpyrimidine kinase PACID_RS01375 PF03070 TENA/THI-4/PQQC family PACID_RS01375 PF02581 Thiamine monophosphate synthase PACID_RS01380 PF02581 Thiamine monophosphate synthase PACID_RS01385 PF08450 SMP-30/Gluconolactonase/LRE-like region PACID_RS01400 PF02653 Branched-chain amino acid transport system / permease component PACID_RS01405 PF02653 Branched-chain amino acid transport system / permease component PACID_RS01410 PF00005 ABC transporter PACID_RS01415 PF13407 Periplasmic binding protein domain PACID_RS01420 PF00356 Bacterial regulatory proteins, lacI family PACID_RS01440 PF03577 Peptidase family C69 PACID_RS01445 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS01445 PF00107 Zinc-binding dehydrogenase PACID_RS01450 PF00171 Aldehyde dehydrogenase family PACID_RS01460 PF00356 Bacterial regulatory proteins, lacI family PACID_RS01465 PF02614 Glucuronate isomerase PACID_RS01470 PF01232 Mannitol dehydrogenase Rossmann domain PACID_RS01470 PF08125 Mannitol dehydrogenase C-terminal domain PACID_RS01475 PF03786 D-mannonate dehydratase (UxuA) PACID_RS01485 PF00248 Aldo/keto reductase family PACID_RS01495 PF13378 Enolase C-terminal domain-like PACID_RS01495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PACID_RS01515 PF02308 MgtC family PACID_RS01520 PF16875 Glycosyl hydrolase family 36 N-terminal domain PACID_RS01520 PF16874 Glycosyl hydrolase family 36 C-terminal domain PACID_RS01525 PF00356 Bacterial regulatory proteins, lacI family PACID_RS01530 PF03009 Glycerophosphoryl diester phosphodiesterase family PACID_RS01575 PF00271 Helicase conserved C-terminal domain PACID_RS01575 PF12137 RNA polymerase recycling family C-terminal PACID_RS01575 PF18337 RapA N-terminal Tudor like domain PACID_RS01575 PF18339 RapA N-terminal Tudor like domain 1 PACID_RS01575 PF00176 SNF2 family N-terminal domain PACID_RS01585 PF08494 DEAD/H associated PACID_RS01585 PF00271 Helicase conserved C-terminal domain PACID_RS01585 PF00270 DEAD/DEAH box helicase PACID_RS01600 PF00570 HRDC domain PACID_RS01600 PF13361 UvrD-like helicase C-terminal domain PACID_RS01600 PF00580 UvrD/REP helicase N-terminal domain PACID_RS01610 PF00665 Integrase core domain PACID_RS01615 PF00872 Transposase, Mutator family PACID_RS01640 PF02540 NAD synthase PACID_RS01640 PF00958 GMP synthase C terminal domain PACID_RS01640 PF00117 Glutamine amidotransferase class-I PACID_RS01655 PF13305 Tetracyclin repressor-like, C-terminal domain PACID_RS01655 PF00440 Bacterial regulatory proteins, tetR family PACID_RS01690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS01690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS01695 PF00083 Sugar (and other) transporter PACID_RS01700 PF01261 Xylose isomerase-like TIM barrel PACID_RS01705 PF00480 ROK family PACID_RS01715 PF00795 Carbon-nitrogen hydrolase PACID_RS01725 PF00005 ABC transporter PACID_RS01730 PF12704 MacB-like periplasmic core domain PACID_RS01730 PF02687 FtsX-like permease family PACID_RS01730 PF00005 ABC transporter PACID_RS01745 PF13186 Iron-sulfur cluster-binding domain PACID_RS01745 PF04055 Radical SAM superfamily PACID_RS01750 PF00884 Sulfatase PACID_RS01750 PF12411 Choline sulfatase enzyme C terminal PACID_RS01775 PF00202 Aminotransferase class-III PACID_RS01785 PF01238 Phosphomannose isomerase type I PACID_RS01790 PF00294 pfkB family carbohydrate kinase PACID_RS01795 PF01081 KDPG and KHG aldolase PACID_RS01800 PF01614 Bacterial transcriptional regulator PACID_RS01800 PF09339 IclR helix-turn-helix domain PACID_RS01805 PF00356 Bacterial regulatory proteins, lacI family PACID_RS01810 PF08125 Mannitol dehydrogenase C-terminal domain PACID_RS01810 PF01232 Mannitol dehydrogenase Rossmann domain PACID_RS01815 PF08666 SAF domain PACID_RS01815 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PACID_RS01820 PF02614 Glucuronate isomerase PACID_RS01855 PF02614 Glucuronate isomerase PACID_RS01860 PF01232 Mannitol dehydrogenase Rossmann domain PACID_RS01860 PF08125 Mannitol dehydrogenase C-terminal domain PACID_RS01885 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS01885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_RS01890 PF13936 Helix-turn-helix domain PACID_RS01890 PF00665 Integrase core domain PACID_RS01900 PF01370 NAD dependent epimerase/dehydratase family PACID_RS01910 PF02929 Beta galactosidase small chain PACID_RS01910 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_RS01910 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PACID_RS01910 PF00703 Glycosyl hydrolases family 2 PACID_RS01910 PF16353 Domain of unknown function(DUF4981) PACID_RS01915 PF00872 Transposase, Mutator family PACID_RS01930 PF00291 Pyridoxal-phosphate dependent enzyme PACID_RS01945 PF01695 IstB-like ATP binding protein PACID_RS01950 PF02374 Anion-transporting ATPase PACID_RS01955 PF06953 Arsenical resistance operon trans-acting repressor ArsD PACID_RS01960 PF01022 Bacterial regulatory protein, arsR family PACID_RS01995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS01995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS02010 PF09370 Phosphoenolpyruvate hydrolase-like PACID_RS02020 PF07729 FCD domain PACID_RS02020 PF00392 Bacterial regulatory proteins, gntR family PACID_RS02025 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS02025 PF00107 Zinc-binding dehydrogenase PACID_RS02040 PF16193 AAA C-terminal domain PACID_RS02040 PF00004 ATPase family associated with various cellular activities (AAA) PACID_RS02040 PF12002 MgsA AAA+ ATPase C terminal PACID_RS02055 PF00005 ABC transporter PACID_RS02065 PF07687 Peptidase dimerisation domain PACID_RS02065 PF01546 Peptidase family M20/M25/M40 PACID_RS02075 PF09335 SNARE associated Golgi protein PACID_RS02080 PF00107 Zinc-binding dehydrogenase PACID_RS02080 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS02095 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PACID_RS02095 PF02779 Transketolase, pyrimidine binding domain PACID_RS02095 PF02780 Transketolase, C-terminal domain PACID_RS02125 PF00571 CBS domain PACID_RS02125 PF01595 Cyclin M transmembrane N-terminal domain PACID_RS02130 PF01595 Cyclin M transmembrane N-terminal domain PACID_RS02130 PF03471 Transporter associated domain PACID_RS02130 PF00571 CBS domain PACID_RS02165 PF00743 Flavin-binding monooxygenase-like PACID_RS02190 PF01451 Low molecular weight phosphotyrosine protein phosphatase PACID_RS02230 PF00912 Transglycosylase PACID_RS02230 PF00905 Penicillin binding protein transpeptidase domain PACID_RS02250 PF00535 Glycosyl transferase family 2 PACID_RS02265 PF00534 Glycosyl transferases group 1 PACID_RS02265 PF13439 Glycosyltransferase Family 4 PACID_RS02270 PF00534 Glycosyl transferases group 1 PACID_RS02270 PF13439 Glycosyltransferase Family 4 PACID_RS02310 PF12804 MobA-like NTP transferase domain PACID_RS02310 PF14602 Hexapeptide repeat of succinyl-transferase PACID_RS02310 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_RS02315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PACID_RS02320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS02320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS02340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_RS02340 PF02378 Phosphotransferase system, EIIC PACID_RS02345 PF00294 pfkB family carbohydrate kinase PACID_RS02350 PF08220 DeoR-like helix-turn-helix domain PACID_RS02350 PF00455 DeoR C terminal sensor domain PACID_RS02355 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS02360 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS02365 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_RS02370 PF00005 ABC transporter PACID_RS02375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PACID_RS02375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PACID_RS02375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PACID_RS02390 PF02350 UDP-N-acetylglucosamine 2-epimerase PACID_RS02435 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS02440 PF00293 NUDIX domain PACID_RS02440 PF13344 Haloacid dehalogenase-like hydrolase PACID_RS02445 PF00270 DEAD/DEAH box helicase PACID_RS02445 PF04408 Helicase associated domain (HA2) PACID_RS02445 PF00271 Helicase conserved C-terminal domain PACID_RS02445 PF08482 ATP-dependent helicase C-terminal PACID_RS02460 PF02245 Methylpurine-DNA glycosylase (MPG) PACID_RS02475 PF00107 Zinc-binding dehydrogenase PACID_RS02475 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS02480 PF01047 MarR family PACID_RS02485 PF00255 Glutathione peroxidase PACID_RS02490 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS02495 PF00085 Thioredoxin PACID_RS02500 PF06965 Na+/H+ antiporter 1 PACID_RS02500 PF13462 Thioredoxin PACID_RS02505 PF03796 DnaB-like helicase C terminal domain PACID_RS02505 PF00772 DnaB-like helicase N terminal domain PACID_RS02510 PF02583 Metal-sensitive transcriptional repressor PACID_RS02520 PF00403 Heavy-metal-associated domain PACID_RS02525 PF03330 Lytic transglycolase PACID_RS02535 PF01180 Dihydroorotate dehydrogenase PACID_RS02540 PF10371 Domain of unknown function PACID_RS02540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_RS02540 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PACID_RS02540 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PACID_RS02540 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PACID_RS02545 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS02545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PACID_RS02555 PF07729 FCD domain PACID_RS02555 PF00392 Bacterial regulatory proteins, gntR family PACID_RS02560 PF02652 L-lactate permease PACID_RS02565 PF02754 Cysteine-rich domain PACID_RS02570 PF11870 Domain of unknown function (DUF3390) PACID_RS02570 PF13183 4Fe-4S dicluster domain PACID_RS02570 PF02589 LUD domain PACID_RS02575 PF02589 LUD domain PACID_RS02580 PF00664 ABC transporter transmembrane region PACID_RS02580 PF00005 ABC transporter PACID_RS02585 PF00664 ABC transporter transmembrane region PACID_RS02585 PF00005 ABC transporter PACID_RS02590 PF02322 Cytochrome bd terminal oxidase subunit II PACID_RS02595 PF01654 Cytochrome bd terminal oxidase subunit I PACID_RS02605 PF00072 Response regulator receiver domain PACID_RS02605 PF00196 Bacterial regulatory proteins, luxR family PACID_RS02640 PF00465 Iron-containing alcohol dehydrogenase PACID_RS02645 PF01301 Glycosyl hydrolases family 35 PACID_RS02655 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS02670 PF00356 Bacterial regulatory proteins, lacI family PACID_RS02675 PF00005 ABC transporter PACID_RS02675 PF00664 ABC transporter transmembrane region PACID_RS02680 PF00664 ABC transporter transmembrane region PACID_RS02680 PF00005 ABC transporter PACID_RS02690 PF13419 Haloacid dehalogenase-like hydrolase PACID_RS02705 PF00696 Amino acid kinase family PACID_RS02715 PF06545 Protein of unknown function (DUF1116) PACID_RS02720 PF02629 CoA binding domain PACID_RS02720 PF00549 CoA-ligase PACID_RS02725 PF00392 Bacterial regulatory proteins, gntR family PACID_RS02725 PF07729 FCD domain PACID_RS02740 PF01546 Peptidase family M20/M25/M40 PACID_RS02740 PF07687 Peptidase dimerisation domain PACID_RS02745 PF00266 Aminotransferase class-V PACID_RS02750 PF01979 Amidohydrolase family PACID_RS02755 PF00375 Sodium:dicarboxylate symporter family PACID_RS02760 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PACID_RS02765 PF01177 Asp/Glu/Hydantoin racemase PACID_RS02770 PF01906 Putative heavy-metal-binding PACID_RS02775 PF00152 tRNA synthetases class II (D, K and N) PACID_RS02775 PF01336 OB-fold nucleic acid binding domain PACID_RS02780 PF06781 Cell division protein CrgA PACID_RS02790 PF00117 Glutamine amidotransferase class-I PACID_RS02795 PF03793 PASTA domain PACID_RS02795 PF00069 Protein kinase domain PACID_RS02800 PF00905 Penicillin binding protein transpeptidase domain PACID_RS02805 PF01098 Cell cycle protein PACID_RS02815 PF16697 Inner membrane component of T3SS, cytoplasmic domain PACID_RS02820 PF00498 FHA domain PACID_RS02820 PF12401 Protein of unknown function (DUF2662) PACID_RS02825 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PACID_RS02830 PF16363 GDP-mannose 4,6 dehydratase PACID_RS02835 PF00483 Nucleotidyl transferase PACID_RS02845 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain PACID_RS02845 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain PACID_RS02845 PF08531 Alpha-L-rhamnosidase N-terminal domain PACID_RS02845 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain PACID_RS02850 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS02850 PF00107 Zinc-binding dehydrogenase PACID_RS02855 PF02397 Bacterial sugar transferase PACID_RS02870 PF03816 Cell envelope-related transcriptional attenuator domain PACID_RS02880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_RS02880 PF00128 Alpha amylase, catalytic domain PACID_RS02890 PF00128 Alpha amylase, catalytic domain PACID_RS02895 PF07690 Major Facilitator Superfamily PACID_RS02895 PF00083 Sugar (and other) transporter PACID_RS02900 PF03551 Transcriptional regulator PadR-like family PACID_RS02905 PF03109 ABC1 family PACID_RS02915 PF00324 Amino acid permease PACID_RS02920 PF00440 Bacterial regulatory proteins, tetR family PACID_RS02920 PF17933 Tetracyclin repressor-like, C-terminal domain PACID_RS02925 PF00005 ABC transporter PACID_RS02925 PF13732 Domain of unknown function (DUF4162) PACID_RS02960 PF12169 DNA polymerase III subunits gamma and tau domain III PACID_RS02965 PF02575 YbaB/EbfC DNA-binding family PACID_RS02970 PF02132 RecR protein PACID_RS02970 PF13662 Toprim domain PACID_RS02975 PF01910 Thiamine-binding protein PACID_RS02985 PF01301 Glycosyl hydrolases family 35 PACID_RS02995 PF12704 MacB-like periplasmic core domain PACID_RS02995 PF02687 FtsX-like permease family PACID_RS02995 PF00005 ABC transporter PACID_RS03020 PF00133 tRNA synthetases class I (I, L, M and V) PACID_RS03020 PF08264 Anticodon-binding domain of tRNA PACID_RS03030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS03040 PF13840 ACT domain PACID_RS03040 PF01842 ACT domain PACID_RS03040 PF00696 Amino acid kinase family PACID_RS03045 PF03023 Lipid II flippase MurJ PACID_RS03055 PF01522 Polysaccharide deacetylase PACID_RS03060 PF03741 Integral membrane protein TerC family PACID_RS03065 PF07690 Major Facilitator Superfamily PACID_RS03070 PF03466 LysR substrate binding domain PACID_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_RS03080 PF02040 Arsenical pump membrane protein PACID_RS03090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PACID_RS03095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PACID_RS03110 PF00248 Aldo/keto reductase family PACID_RS03130 PF01161 Phosphatidylethanolamine-binding protein PACID_RS03140 PF00271 Helicase conserved C-terminal domain PACID_RS03140 PF00270 DEAD/DEAH box helicase PACID_RS03140 PF08148 DSHCT (NUC185) domain PACID_RS03150 PF00342 Phosphoglucose isomerase PACID_RS03160 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_RS03165 PF07690 Major Facilitator Superfamily PACID_RS03170 PF00248 Aldo/keto reductase family PACID_RS03175 PF00750 tRNA synthetases class I (R) PACID_RS03175 PF05746 DALR anticodon binding domain PACID_RS03175 PF03485 Arginyl tRNA synthetase N terminal domain PACID_RS03180 PF00480 ROK family PACID_RS03195 PF00083 Sugar (and other) transporter PACID_RS03210 PF00171 Aldehyde dehydrogenase family PACID_RS03215 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_RS03220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS03220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS03225 PF01261 Xylose isomerase-like TIM barrel PACID_RS03230 PF07690 Major Facilitator Superfamily PACID_RS03240 PF00356 Bacterial regulatory proteins, lacI family PACID_RS03260 PF07690 Major Facilitator Superfamily PACID_RS03280 PF00356 Bacterial regulatory proteins, lacI family PACID_RS03290 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03295 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_RS03295 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03300 PF00005 ABC transporter PACID_RS03300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS03305 PF10415 Fumarase C C-terminus PACID_RS03305 PF00206 Lyase PACID_RS03310 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS03335 PF07690 Major Facilitator Superfamily PACID_RS03340 PF00440 Bacterial regulatory proteins, tetR family PACID_RS03350 PF01425 Amidase PACID_RS03355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS03355 PF00005 ABC transporter PACID_RS03370 PF00005 ABC transporter PACID_RS03375 PF00440 Bacterial regulatory proteins, tetR family PACID_RS03385 PF16875 Glycosyl hydrolase family 36 N-terminal domain PACID_RS03385 PF16874 Glycosyl hydrolase family 36 C-terminal domain PACID_RS03390 PF01547 Bacterial extracellular solute-binding protein PACID_RS03395 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03400 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03405 PF13419 Haloacid dehalogenase-like hydrolase PACID_RS03410 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_RS03410 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PACID_RS03415 PF01263 Aldose 1-epimerase PACID_RS03425 PF05175 Methyltransferase small domain PACID_RS03430 PF03618 Kinase/pyrophosphorylase PACID_RS03435 PF00391 PEP-utilising enzyme, mobile domain PACID_RS03435 PF02896 PEP-utilising enzyme, TIM barrel domain PACID_RS03435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PACID_RS03450 PF01791 DeoC/LacD family aldolase PACID_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS03455 PF00672 HAMP domain PACID_RS03455 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS03460 PF00486 Transcriptional regulatory protein, C terminal PACID_RS03460 PF00072 Response regulator receiver domain PACID_RS03465 PF01384 Phosphate transporter family PACID_RS03475 PF00012 Hsp70 protein PACID_RS03480 PF01025 GrpE PACID_RS03485 PF00226 DnaJ domain PACID_RS03485 PF01556 DnaJ C terminal domain PACID_RS03485 PF00684 DnaJ central domain PACID_RS03490 PF13411 MerR HTH family regulatory protein PACID_RS03495 PF00107 Zinc-binding dehydrogenase PACID_RS03495 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS03500 PF03306 Alpha-acetolactate decarboxylase PACID_RS03505 PF02080 TrkA-C domain PACID_RS03505 PF06826 Predicted Permease Membrane Region PACID_RS03510 PF00324 Amino acid permease PACID_RS03525 PF12704 MacB-like periplasmic core domain PACID_RS03525 PF02687 FtsX-like permease family PACID_RS03525 PF00005 ABC transporter PACID_RS03535 PF00196 Bacterial regulatory proteins, luxR family PACID_RS03535 PF00072 Response regulator receiver domain PACID_RS03540 PF07730 Histidine kinase PACID_RS03555 PF00274 Fructose-bisphosphate aldolase class-I PACID_RS03560 PF00356 Bacterial regulatory proteins, lacI family PACID_RS03565 PF16875 Glycosyl hydrolase family 36 N-terminal domain PACID_RS03565 PF16874 Glycosyl hydrolase family 36 C-terminal domain PACID_RS03570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PACID_RS03580 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03595 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_RS03595 PF07724 AAA domain (Cdc48 subfamily) PACID_RS03595 PF17871 AAA lid domain PACID_RS03595 PF02861 Clp amino terminal domain, pathogenicity island component PACID_RS03595 PF00004 ATPase family associated with various cellular activities (AAA) PACID_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03605 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03615 PF00294 pfkB family carbohydrate kinase PACID_RS03620 PF00455 DeoR C terminal sensor domain PACID_RS03620 PF08220 DeoR-like helix-turn-helix domain PACID_RS03625 PF02056 Family 4 glycosyl hydrolase PACID_RS03625 PF11975 Family 4 glycosyl hydrolase C-terminal domain PACID_RS03635 PF00011 Hsp20/alpha crystallin family PACID_RS03655 PF05368 NmrA-like family PACID_RS03670 PF11867 Domain of unknown function (DUF3387) PACID_RS03670 PF18766 SWI2/SNF2 ATPase PACID_RS03670 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_RS03680 PF02384 N-6 DNA Methylase PACID_RS03715 PF02810 SEC-C motif PACID_RS03720 PF00005 ABC transporter PACID_RS03720 PF00571 CBS domain PACID_RS03725 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03740 PF00155 Aminotransferase class I and II PACID_RS03740 PF00392 Bacterial regulatory proteins, gntR family PACID_RS03745 PF00005 ABC transporter PACID_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03765 PF00571 CBS domain PACID_RS03765 PF00005 ABC transporter PACID_RS03770 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS03775 PF00732 GMC oxidoreductase PACID_RS03775 PF05199 GMC oxidoreductase PACID_RS03780 PF00171 Aldehyde dehydrogenase family PACID_RS03785 PF00155 Aminotransferase class I and II PACID_RS03805 PF04011 LemA family PACID_RS03810 PF00294 pfkB family carbohydrate kinase PACID_RS03810 PF01467 Cytidylyltransferase-like PACID_RS03830 PF00534 Glycosyl transferases group 1 PACID_RS03830 PF13439 Glycosyltransferase Family 4 PACID_RS03855 PF13614 AAA domain PACID_RS03875 PF09335 SNARE associated Golgi protein PACID_RS03890 PF01116 Fructose-bisphosphate aldolase class-II PACID_RS03895 PF00682 HMGL-like PACID_RS03895 PF02436 Conserved carboxylase domain PACID_RS03900 PF01039 Carboxyl transferase domain PACID_RS03905 PF01039 Carboxyl transferase domain PACID_RS03910 PF00364 Biotin-requiring enzyme PACID_RS03915 PF00106 short chain dehydrogenase PACID_RS03920 PF02896 PEP-utilising enzyme, TIM barrel domain PACID_RS03920 PF05524 PEP-utilising enzyme, N-terminal PACID_RS03920 PF00391 PEP-utilising enzyme, mobile domain PACID_RS03925 PF00381 PTS HPr component phosphorylation site PACID_RS03930 PF00300 Histidine phosphatase superfamily (branch 1) PACID_RS03935 PF01895 PhoU domain PACID_RS03940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS03940 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS03945 PF00072 Response regulator receiver domain PACID_RS03945 PF00486 Transcriptional regulatory protein, C terminal PACID_RS03960 PF02559 CarD-like/TRCF domain PACID_RS03965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_RS03975 PF03611 PTS system sugar-specific permease component PACID_RS03985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PACID_RS03985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PACID_RS03990 PF04198 Putative sugar-binding domain PACID_RS04000 PF07663 Sorbitol phosphotransferase enzyme II C-terminus PACID_RS04000 PF03612 Sorbitol phosphotransferase enzyme II N-terminus PACID_RS04020 PF00107 Zinc-binding dehydrogenase PACID_RS04020 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS04025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_RS04025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_RS04025 PF01842 ACT domain PACID_RS04035 PF01116 Fructose-bisphosphate aldolase class-II PACID_RS04050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PACID_RS04055 PF02542 YgbB family PACID_RS04075 PF00464 Serine hydroxymethyltransferase PACID_RS04085 PF07690 Major Facilitator Superfamily PACID_RS04095 PF00588 SpoU rRNA Methylase family PACID_RS04095 PF08032 RNA 2'-O ribose methyltransferase substrate binding PACID_RS04100 PF09190 DALR domain PACID_RS04100 PF01406 tRNA synthetases class I (C) catalytic domain PACID_RS04115 PF01053 Cys/Met metabolism PLP-dependent enzyme PACID_RS04120 PF03780 Asp23 family, cell envelope-related function PACID_RS04170 PF17912 MalK OB fold domain PACID_RS04170 PF00005 ABC transporter PACID_RS04180 PF07690 Major Facilitator Superfamily PACID_RS04200 PF03313 Serine dehydratase alpha chain PACID_RS04200 PF03315 Serine dehydratase beta chain PACID_RS04205 PF00480 ROK family PACID_RS04210 PF01547 Bacterial extracellular solute-binding protein PACID_RS04215 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS04220 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS04225 PF00107 Zinc-binding dehydrogenase PACID_RS04225 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS04230 PF00155 Aminotransferase class I and II PACID_RS04240 PF01661 Macro domain PACID_RS04245 PF00005 ABC transporter PACID_RS04255 PF07730 Histidine kinase PACID_RS04260 PF00196 Bacterial regulatory proteins, luxR family PACID_RS04260 PF00072 Response regulator receiver domain PACID_RS04265 PF00809 Pterin binding enzyme PACID_RS04270 PF00300 Histidine phosphatase superfamily (branch 1) PACID_RS04285 PF00005 ABC transporter PACID_RS04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS04290 PF07730 Histidine kinase PACID_RS04290 PF00672 HAMP domain PACID_RS04295 PF00072 Response regulator receiver domain PACID_RS04295 PF00196 Bacterial regulatory proteins, luxR family PACID_RS04300 PF03186 CobD/Cbib protein PACID_RS04305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_RS04305 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_RS04310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS04315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS04320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PACID_RS04320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS04325 PF10414 Sirohaem synthase dimerisation region PACID_RS04325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS04325 PF14824 Sirohaem biosynthesis protein central PACID_RS04335 PF02570 Precorrin-8X methylmutase PACID_RS04340 PF01891 Cobalt uptake substrate-specific transmembrane region PACID_RS04345 PF02553 Cobalt transport protein component CbiN PACID_RS04350 PF02361 Cobalt transport protein PACID_RS04355 PF00005 ABC transporter PACID_RS04360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS04365 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PACID_RS04365 PF12557 Cob(I)alamin adenosyltransferase N terminal PACID_RS04370 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_RS04370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_RS04375 PF10414 Sirohaem synthase dimerisation region PACID_RS04375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS04375 PF14824 Sirohaem biosynthesis protein central PACID_RS04380 PF02571 Precorrin-6x reductase CbiJ/CobK PACID_RS04385 PF02277 Phosphoribosyltransferase PACID_RS04390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PACID_RS04395 PF02654 Cobalamin-5-phosphate synthase PACID_RS04415 PF02664 S-Ribosylhomocysteinase (LuxS) PACID_RS04420 PF01238 Phosphomannose isomerase type I PACID_RS04430 PF00118 TCP-1/cpn60 chaperonin family PACID_RS04455 PF03932 CutC family PACID_RS04475 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PACID_RS04480 PF00313 'Cold-shock' DNA-binding domain PACID_RS04495 PF00860 Permease family PACID_RS04510 PF00266 Aminotransferase class-V PACID_RS04515 PF01979 Amidohydrolase family PACID_RS04520 PF02742 Iron dependent repressor, metal binding and dimerisation domain PACID_RS04520 PF18357 Diphteria toxin repressor SH3 domain PACID_RS04520 PF01325 Iron dependent repressor, N-terminal DNA binding domain PACID_RS04530 PF00085 Thioredoxin PACID_RS04535 PF00923 Transaldolase/Fructose-6-phosphate aldolase PACID_RS04540 PF00294 pfkB family carbohydrate kinase PACID_RS04550 PF04962 KduI/IolB family PACID_RS04555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_RS04555 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_RS04555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_RS04565 PF00356 Bacterial regulatory proteins, lacI family PACID_RS04570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS04570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS04575 PF00083 Sugar (and other) transporter PACID_RS04580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS04580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS04600 PF01741 Large-conductance mechanosensitive channel, MscL PACID_RS04615 PF01812 5-formyltetrahydrofolate cyclo-ligase family PACID_RS04645 PF01965 DJ-1/PfpI family PACID_RS04660 PF00155 Aminotransferase class I and II PACID_RS04670 PF13302 Acetyltransferase (GNAT) domain PACID_RS04675 PF00176 SNF2 family N-terminal domain PACID_RS04675 PF00271 Helicase conserved C-terminal domain PACID_RS04675 PF12419 SNF2 Helicase protein PACID_RS04700 PF00890 FAD binding domain PACID_RS04705 PF00440 Bacterial regulatory proteins, tetR family PACID_RS04715 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_RS04715 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_RS04730 PF00376 MerR family regulatory protein PACID_RS04730 PF09278 MerR, DNA binding PACID_RS04740 PF01965 DJ-1/PfpI family PACID_RS04755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PACID_RS04755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PACID_RS04760 PF00072 Response regulator receiver domain PACID_RS04760 PF00196 Bacterial regulatory proteins, luxR family PACID_RS04770 PF07859 alpha/beta hydrolase fold PACID_RS04785 PF05532 CsbD-like PACID_RS04795 PF03746 LamB/YcsF family PACID_RS04800 PF02682 Carboxyltransferase domain, subdomain C and D PACID_RS04805 PF00069 Protein kinase domain PACID_RS04810 PF00860 Permease family PACID_RS04815 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PACID_RS04815 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase PACID_RS04820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS04825 PF01026 TatD related DNase PACID_RS04830 PF00398 Ribosomal RNA adenine dimethylase PACID_RS04835 PF00288 GHMP kinases N terminal domain PACID_RS04835 PF08544 GHMP kinases C terminal PACID_RS04840 PF01047 MarR family PACID_RS04845 PF00440 Bacterial regulatory proteins, tetR family PACID_RS04855 PF12804 MobA-like NTP transferase domain PACID_RS04855 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_RS04860 PF14572 Phosphoribosyl synthetase-associated domain PACID_RS04860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PACID_RS04865 PF14693 Ribosomal protein TL5, C-terminal domain PACID_RS04865 PF01386 Ribosomal L25p family PACID_RS04870 PF01195 Peptidyl-tRNA hydrolase PACID_RS04875 PF03461 TRCF domain PACID_RS04875 PF02559 CarD-like/TRCF domain PACID_RS04875 PF00270 DEAD/DEAH box helicase PACID_RS04875 PF00271 Helicase conserved C-terminal domain PACID_RS04875 PF17757 UvrB interaction domain PACID_RS04885 PF03819 MazG nucleotide pyrophosphohydrolase domain PACID_RS04890 PF03952 Enolase, N-terminal domain PACID_RS04890 PF00113 Enolase, C-terminal TIM barrel domain PACID_RS04905 PF02541 Ppx/GppA phosphatase family PACID_RS04915 PF04454 Encapsulating protein for peroxidase PACID_RS04920 PF04261 Dyp-type peroxidase family PACID_RS04925 PF13180 PDZ domain PACID_RS04925 PF00595 PDZ domain PACID_RS04975 PF05198 Translation initiation factor IF-3, N-terminal domain PACID_RS04975 PF00707 Translation initiation factor IF-3, C-terminal domain PACID_RS04980 PF01632 Ribosomal protein L35 PACID_RS04985 PF00453 Ribosomal protein L20 PACID_RS04990 PF00588 SpoU rRNA Methylase family PACID_RS04990 PF12105 SpoU, rRNA methylase, C-terminal PACID_RS05000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PACID_RS05000 PF01409 tRNA synthetases class II core domain (F) PACID_RS05005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PACID_RS05005 PF03483 B3/4 domain PACID_RS05005 PF03484 tRNA synthetase B5 domain PACID_RS05005 PF01588 Putative tRNA binding domain PACID_RS05005 PF03147 Ferredoxin-fold anticodon binding domain PACID_RS05010 PF06968 Biotin and Thiamin Synthesis associated domain PACID_RS05010 PF04055 Radical SAM superfamily PACID_RS05015 PF00440 Bacterial regulatory proteins, tetR family PACID_RS05015 PF02909 Tetracyclin repressor-like, C-terminal domain PACID_RS05020 PF02863 Arginine repressor, C-terminal domain PACID_RS05020 PF01316 Arginine repressor, DNA binding domain PACID_RS05025 PF00579 tRNA synthetases class I (W and Y) PACID_RS05060 PF01625 Peptide methionine sulfoxide reductase PACID_RS05065 PF03167 Uracil DNA glycosylase superfamily PACID_RS05070 PF01594 AI-2E family transporter PACID_RS05080 PF01272 Transcription elongation factor, GreA/GreB, C-term PACID_RS05080 PF03449 Transcription elongation factor, N-terminal PACID_RS05095 PF03190 Protein of unknown function, DUF255 PACID_RS05100 PF01255 Putative undecaprenyl diphosphate synthase PACID_RS05105 PF03006 Haemolysin-III related PACID_RS05110 PF13638 PIN domain PACID_RS05110 PF02562 PhoH-like protein PACID_RS05120 PF02609 Exonuclease VII small subunit PACID_RS05125 PF02601 Exonuclease VII, large subunit PACID_RS05125 PF13742 OB-fold nucleic acid binding domain PACID_RS05130 PF02401 LytB protein PACID_RS05135 PF02646 RmuC family PACID_RS05140 PF02127 Aminopeptidase I zinc metalloprotease (M18) PACID_RS05145 PF02687 FtsX-like permease family PACID_RS05145 PF00005 ABC transporter PACID_RS05145 PF12704 MacB-like periplasmic core domain PACID_RS05160 PF06071 Protein of unknown function (DUF933) PACID_RS05160 PF01926 50S ribosome-binding GTPase PACID_RS05165 PF02384 N-6 DNA Methylase PACID_RS05170 PF01420 Type I restriction modification DNA specificity domain PACID_RS05175 PF11867 Domain of unknown function (DUF3387) PACID_RS05175 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_RS05175 PF18766 SWI2/SNF2 ATPase PACID_RS05240 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB PACID_RS05245 PF01381 Helix-turn-helix PACID_RS05270 PF00005 ABC transporter PACID_RS05270 PF13732 Domain of unknown function (DUF4162) PACID_RS05275 PF00440 Bacterial regulatory proteins, tetR family PACID_RS05275 PF16859 Tetracyclin repressor-like, C-terminal domain PACID_RS05280 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB PACID_RS05285 PF01381 Helix-turn-helix PACID_RS05335 PF00872 Transposase, Mutator family PACID_RS05355 PF03747 ADP-ribosylglycohydrolase PACID_RS05365 PF01636 Phosphotransferase enzyme family PACID_RS05370 PF00664 ABC transporter transmembrane region PACID_RS05370 PF00005 ABC transporter PACID_RS05375 PF00300 Histidine phosphatase superfamily (branch 1) PACID_RS05395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PACID_RS05395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PACID_RS05400 PF00857 Isochorismatase family PACID_RS05420 PF00072 Response regulator receiver domain PACID_RS05420 PF00196 Bacterial regulatory proteins, luxR family PACID_RS05430 PF00083 Sugar (and other) transporter PACID_RS05435 PF00083 Sugar (and other) transporter PACID_RS05460 PF01842 ACT domain PACID_RS05465 PF07995 Glucose / Sorbosone dehydrogenase PACID_RS05470 PF00248 Aldo/keto reductase family PACID_RS05475 PF08534 Redoxin PACID_RS05480 PF00324 Amino acid permease PACID_RS05485 PF00128 Alpha amylase, catalytic domain PACID_RS05485 PF02903 Alpha amylase, N-terminal ig-like domain PACID_RS05485 PF16657 Maltogenic Amylase, C-terminal domain PACID_RS05490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PACID_RS05490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PACID_RS05500 PF01642 Methylmalonyl-CoA mutase PACID_RS05505 PF02310 B12 binding domain PACID_RS05505 PF01642 Methylmalonyl-CoA mutase PACID_RS05530 PF00005 ABC transporter PACID_RS05535 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS05565 PF00950 ABC 3 transport family PACID_RS05570 PF00005 ABC transporter PACID_RS05590 PF00171 Aldehyde dehydrogenase family PACID_RS05595 PF00107 Zinc-binding dehydrogenase PACID_RS05595 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS05600 PF02733 Dak1 domain PACID_RS05600 PF02734 DAK2 domain PACID_RS05605 PF00156 Phosphoribosyl transferase domain PACID_RS05610 PF08220 DeoR-like helix-turn-helix domain PACID_RS05610 PF00455 DeoR C terminal sensor domain PACID_RS05615 PF02502 Ribose/Galactose Isomerase PACID_RS05625 PF13344 Haloacid dehalogenase-like hydrolase PACID_RS05630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS05630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS05635 PF01761 3-dehydroquinate synthase PACID_RS05640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS05640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS05645 PF02779 Transketolase, pyrimidine binding domain PACID_RS05645 PF02780 Transketolase, C-terminal domain PACID_RS05645 PF00456 Transketolase, thiamine diphosphate binding domain PACID_RS05675 PF07690 Major Facilitator Superfamily PACID_RS05680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PACID_RS05680 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PACID_RS05680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PACID_RS05685 PF02233 NAD(P) transhydrogenase beta subunit PACID_RS05690 PF00144 Beta-lactamase PACID_RS05695 PF04294 VanW like protein PACID_RS05700 PF00037 4Fe-4S binding domain PACID_RS05705 PF00155 Aminotransferase class I and II PACID_RS05720 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PACID_RS05720 PF14602 Hexapeptide repeat of succinyl-transferase PACID_RS05725 PF01546 Peptidase family M20/M25/M40 PACID_RS05725 PF07687 Peptidase dimerisation domain PACID_RS05730 PF03641 Possible lysine decarboxylase PACID_RS05740 PF00534 Glycosyl transferases group 1 PACID_RS05740 PF13439 Glycosyltransferase Family 4 PACID_RS05745 PF00483 Nucleotidyl transferase PACID_RS05770 PF01596 O-methyltransferase PACID_RS05775 PF00701 Dihydrodipicolinate synthetase family PACID_RS05780 PF02416 mttA/Hcf106 family PACID_RS05785 PF01883 Iron-sulfur cluster assembly protein PACID_RS05785 PF10609 NUBPL iron-transfer P-loop NTPase PACID_RS05815 PF05195 Aminopeptidase P, N-terminal domain PACID_RS05815 PF00557 Metallopeptidase family M24 PACID_RS05825 PF00202 Aminotransferase class-III PACID_RS05830 PF00795 Carbon-nitrogen hydrolase PACID_RS05835 PF00324 Amino acid permease PACID_RS05850 PF01544 CorA-like Mg2+ transporter protein PACID_RS05855 PF00557 Metallopeptidase family M24 PACID_RS05865 PF00120 Glutamine synthetase, catalytic domain PACID_RS05865 PF03951 Glutamine synthetase, beta-Grasp domain PACID_RS05875 PF08335 GlnD PII-uridylyltransferase PACID_RS05875 PF03710 Glutamate-ammonia ligase adenylyltransferase PACID_RS05885 PF01784 NIF3 (NGG1p interacting factor 3) PACID_RS05900 PF01381 Helix-turn-helix PACID_RS05910 PF00120 Glutamine synthetase, catalytic domain PACID_RS05910 PF03951 Glutamine synthetase, beta-Grasp domain PACID_RS05925 PF00534 Glycosyl transferases group 1 PACID_RS05925 PF13439 Glycosyltransferase Family 4 PACID_RS05930 PF09335 SNARE associated Golgi protein PACID_RS05935 PF00571 CBS domain PACID_RS05935 PF01769 Divalent cation transporter PACID_RS05935 PF03448 MgtE intracellular N domain PACID_RS05940 PF00005 ABC transporter PACID_RS05940 PF16326 ABC transporter C-terminal domain PACID_RS05940 PF12848 ABC transporter PACID_RS05950 PF04055 Radical SAM superfamily PACID_RS05950 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PACID_RS05955 PF00403 Heavy-metal-associated domain PACID_RS05960 PF05425 Copper resistance protein D PACID_RS05960 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) PACID_RS05965 PF03099 Biotin/lipoate A/B protein ligase family PACID_RS05970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_RS05970 PF00364 Biotin-requiring enzyme PACID_RS05970 PF02817 e3 binding domain PACID_RS06005 PF01521 Iron-sulphur cluster biosynthesis PACID_RS06010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PACID_RS06020 PF12270 Cytochrome c oxidase subunit IV PACID_RS06025 PF00478 IMP dehydrogenase / GMP reductase domain PACID_RS06025 PF00571 CBS domain PACID_RS06035 PF13631 Cytochrome b(N-terminal)/b6/petB PACID_RS06040 PF00355 Rieske [2Fe-2S] domain PACID_RS06045 PF00034 Cytochrome c PACID_RS06045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PACID_RS06050 PF00510 Cytochrome c oxidase subunit III PACID_RS06060 PF00591 Glycosyl transferase family, a/b domain PACID_RS06060 PF02885 Glycosyl transferase family, helical bundle domain PACID_RS06080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PACID_RS06095 PF01541 GIY-YIG catalytic domain PACID_RS06095 PF00929 Exonuclease PACID_RS06105 PF00877 NlpC/P60 family PACID_RS06110 PF00480 ROK family PACID_RS06130 PF00072 Response regulator receiver domain PACID_RS06130 PF00196 Bacterial regulatory proteins, luxR family PACID_RS06135 PF01474 Class-II DAHP synthetase family PACID_RS06160 PF02581 Thiamine monophosphate synthase PACID_RS06165 PF00348 Polyprenyl synthetase PACID_RS06170 PF02219 Methylenetetrahydrofolate reductase PACID_RS06175 PF00570 HRDC domain PACID_RS06175 PF13361 UvrD-like helicase C-terminal domain PACID_RS06195 PF00005 ABC transporter PACID_RS06200 PF12697 Alpha/beta hydrolase family PACID_RS06205 PF00011 Hsp20/alpha crystallin family PACID_RS06210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PACID_RS06210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PACID_RS06215 PF02447 GntP family permease PACID_RS06225 PF07729 FCD domain PACID_RS06225 PF00392 Bacterial regulatory proteins, gntR family PACID_RS06230 PF01061 ABC-2 type transporter PACID_RS06235 PF01061 ABC-2 type transporter PACID_RS06240 PF00005 ABC transporter PACID_RS06245 PF02347 Glycine cleavage system P-protein PACID_RS06250 PF01597 Glycine cleavage H-protein PACID_RS06255 PF01571 Aminomethyltransferase folate-binding domain PACID_RS06255 PF08669 Glycine cleavage T-protein C-terminal barrel domain PACID_RS06265 PF13559 Domain of unknown function (DUF4129) PACID_RS06265 PF01841 Transglutaminase-like superfamily PACID_RS06265 PF11992 Domain of unknown function (DUF3488) PACID_RS06275 PF17863 AAA lid domain PACID_RS06275 PF07726 ATPase family associated with various cellular activities (AAA) PACID_RS06280 PF02381 MraZ protein, putative antitoxin-like PACID_RS06285 PF01795 MraW methylase family PACID_RS06295 PF03717 Penicillin-binding Protein dimerisation domain PACID_RS06295 PF00905 Penicillin binding protein transpeptidase domain PACID_RS06300 PF01225 Mur ligase family, catalytic domain PACID_RS06300 PF02875 Mur ligase family, glutamate ligase domain PACID_RS06300 PF08245 Mur ligase middle domain PACID_RS06305 PF08245 Mur ligase middle domain PACID_RS06305 PF02875 Mur ligase family, glutamate ligase domain PACID_RS06305 PF01225 Mur ligase family, catalytic domain PACID_RS06310 PF00953 Glycosyl transferase family 4 PACID_RS06310 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PACID_RS06315 PF02875 Mur ligase family, glutamate ligase domain PACID_RS06315 PF08245 Mur ligase middle domain PACID_RS06320 PF01098 Cell cycle protein PACID_RS06325 PF03033 Glycosyltransferase family 28 N-terminal domain PACID_RS06325 PF04101 Glycosyltransferase family 28 C-terminal domain PACID_RS06330 PF08245 Mur ligase middle domain PACID_RS06330 PF02875 Mur ligase family, glutamate ligase domain PACID_RS06330 PF01225 Mur ligase family, catalytic domain PACID_RS06335 PF03799 Cell division protein FtsQ PACID_RS06335 PF08478 POTRA domain, FtsQ-type PACID_RS06340 PF12327 FtsZ family, C-terminal domain PACID_RS06340 PF00091 Tubulin/FtsZ family, GTPase domain PACID_RS06345 PF02578 Multi-copper polyphenol oxidoreductase laccase PACID_RS06350 PF04472 Cell division protein SepF PACID_RS06365 PF01258 Prokaryotic dksA/traR C4-type zinc finger PACID_RS06370 PF01252 Signal peptidase (SPase) II PACID_RS06375 PF00849 RNA pseudouridylate synthase PACID_RS06380 PF00224 Pyruvate kinase, barrel domain PACID_RS06380 PF02887 Pyruvate kinase, alpha/beta domain PACID_RS06390 PF00072 Response regulator receiver domain PACID_RS06390 PF03861 ANTAR domain PACID_RS06395 PF03061 Thioesterase superfamily PACID_RS06400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS06405 PF01367 5'-3' exonuclease, C-terminal SAM fold PACID_RS06405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PACID_RS06405 PF00476 DNA polymerase family A PACID_RS06420 PF00575 S1 RNA binding domain PACID_RS06425 PF01121 Dephospho-CoA kinase PACID_RS06440 PF00271 Helicase conserved C-terminal domain PACID_RS06440 PF04851 Type III restriction enzyme, res subunit PACID_RS06440 PF02151 UvrB/uvrC motif PACID_RS06440 PF12344 Ultra-violet resistance protein B PACID_RS06440 PF17757 UvrB interaction domain PACID_RS06445 PF03741 Integral membrane protein TerC family PACID_RS06455 PF17760 UvrA interaction domain PACID_RS06455 PF00005 ABC transporter PACID_RS06455 PF17755 UvrA DNA-binding domain PACID_RS06475 PF01541 GIY-YIG catalytic domain PACID_RS06475 PF08459 UvrC Helix-hairpin-helix N-terminal PACID_RS06475 PF02151 UvrB/uvrC motif PACID_RS06480 PF03668 P-loop ATPase protein family PACID_RS06485 PF01933 Uncharacterised protein family UPF0052 PACID_RS06490 PF14527 WhiA LAGLIDADG-like domain PACID_RS06490 PF02650 WhiA C-terminal HTH domain PACID_RS06490 PF10298 WhiA N-terminal LAGLIDADG-like domain PACID_RS06495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PACID_RS06495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PACID_RS06500 PF00162 Phosphoglycerate kinase PACID_RS06505 PF00121 Triosephosphate isomerase PACID_RS06510 PF03840 Preprotein translocase SecG subunit PACID_RS06520 PF08245 Mur ligase middle domain PACID_RS06520 PF02875 Mur ligase family, glutamate ligase domain PACID_RS06530 PF00334 Nucleoside diphosphate kinase PACID_RS06540 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_RS06540 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_RS06550 PF10150 Ribonuclease E/G family PACID_RS06555 PF00829 Ribosomal prokaryotic L21 protein PACID_RS06560 PF01016 Ribosomal L27 protein PACID_RS06570 PF09269 Domain of unknown function (DUF1967) PACID_RS06570 PF01018 GTP1/OBG PACID_RS06570 PF01926 50S ribosome-binding GTPase PACID_RS06575 PF01472 PUA domain PACID_RS06575 PF00696 Amino acid kinase family PACID_RS06580 PF00171 Aldehyde dehydrogenase family PACID_RS06585 PF01467 Cytidylyltransferase-like PACID_RS06595 PF00300 Histidine phosphatase superfamily (branch 1) PACID_RS06625 PF01810 LysE type translocator PACID_RS06630 PF01037 Lrp/AsnC ligand binding domain PACID_RS06665 PF00005 ABC transporter PACID_RS06710 PF00709 Adenylosuccinate synthetase PACID_RS06740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_RS06745 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS06745 PF00107 Zinc-binding dehydrogenase PACID_RS06745 PF13823 Alcohol dehydrogenase GroES-associated PACID_RS06750 PF01323 DSBA-like thioredoxin domain PACID_RS06765 PF09334 tRNA synthetases class I (M) PACID_RS06765 PF08264 Anticodon-binding domain of tRNA PACID_RS06765 PF00133 tRNA synthetases class I (I, L, M and V) PACID_RS06765 PF13603 Leucyl-tRNA synthetase, Domain 2 PACID_RS06775 PF03772 Competence protein PACID_RS06775 PF00753 Metallo-beta-lactamase superfamily PACID_RS06775 PF13567 Domain of unknown function (DUF4131) PACID_RS06780 PF04851 Type III restriction enzyme, res subunit PACID_RS06790 PF01649 Ribosomal protein S20 PACID_RS06795 PF00128 Alpha amylase, catalytic domain PACID_RS06800 PF06421 GTP-binding protein LepA C-terminus PACID_RS06800 PF00009 Elongation factor Tu GTP binding domain PACID_RS06800 PF03144 Elongation factor Tu domain 2 PACID_RS06800 PF00679 Elongation factor G C-terminus PACID_RS06820 PF13378 Enolase C-terminal domain-like PACID_RS06820 PF18374 Enolase N-terminal domain-like PACID_RS06825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_RS06825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_RS06830 PF00425 chorismate binding enzyme PACID_RS06835 PF00501 AMP-binding enzyme PACID_RS06835 PF13193 AMP-binding enzyme C-terminal domain PACID_RS06840 PF00378 Enoyl-CoA hydratase/isomerase PACID_RS06845 PF01694 Rhomboid family PACID_RS06850 PF00501 AMP-binding enzyme PACID_RS06850 PF16177 Acetyl-coenzyme A synthetase N-terminus PACID_RS06850 PF13193 AMP-binding enzyme C-terminal domain PACID_RS06855 PF00501 AMP-binding enzyme PACID_RS06855 PF13193 AMP-binding enzyme C-terminal domain PACID_RS06855 PF16177 Acetyl-coenzyme A synthetase N-terminus PACID_RS06865 PF00005 ABC transporter PACID_RS06865 PF13732 Domain of unknown function (DUF4162) PACID_RS06870 PF17754 MftR C-terminal domain PACID_RS06870 PF00440 Bacterial regulatory proteins, tetR family PACID_RS06875 PF00083 Sugar (and other) transporter PACID_RS06875 PF07690 Major Facilitator Superfamily PACID_RS06880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PACID_RS06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS06890 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS06900 PF04055 Radical SAM superfamily PACID_RS06910 PF00459 Inositol monophosphatase family PACID_RS06930 PF08220 DeoR-like helix-turn-helix domain PACID_RS06930 PF01628 HrcA protein C terminal domain PACID_RS06935 PF01556 DnaJ C terminal domain PACID_RS06935 PF00684 DnaJ central domain PACID_RS06935 PF00226 DnaJ domain PACID_RS06940 PF04452 RNA methyltransferase PACID_RS06945 PF00107 Zinc-binding dehydrogenase PACID_RS06945 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS06950 PF02378 Phosphotransferase system, EIIC PACID_RS06950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_RS06950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_RS06960 PF16124 RecQ zinc-binding PACID_RS06960 PF00270 DEAD/DEAH box helicase PACID_RS06960 PF09382 RQC domain PACID_RS06960 PF00570 HRDC domain PACID_RS06960 PF00271 Helicase conserved C-terminal domain PACID_RS06965 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_RS06965 PF14602 Hexapeptide repeat of succinyl-transferase PACID_RS06965 PF12804 MobA-like NTP transferase domain PACID_RS06970 PF00892 EamA-like transporter family PACID_RS06975 PF01702 Queuine tRNA-ribosyltransferase PACID_RS06980 PF07730 Histidine kinase PACID_RS06980 PF17200 Single Cache domain 2 PACID_RS06985 PF00196 Bacterial regulatory proteins, luxR family PACID_RS06985 PF00072 Response regulator receiver domain PACID_RS06990 PF13732 Domain of unknown function (DUF4162) PACID_RS06990 PF00005 ABC transporter PACID_RS07015 PF00561 alpha/beta hydrolase fold PACID_RS07030 PF01209 ubiE/COQ5 methyltransferase family PACID_RS07045 PF02562 PhoH-like protein PACID_RS07050 PF02130 Uncharacterized protein family UPF0054 PACID_RS07055 PF00571 CBS domain PACID_RS07055 PF01595 Cyclin M transmembrane N-terminal domain PACID_RS07055 PF03471 Transporter associated domain PACID_RS07060 PF01926 50S ribosome-binding GTPase PACID_RS07060 PF07650 KH domain PACID_RS07070 PF08502 LeuA allosteric (dimerisation) domain PACID_RS07070 PF00682 HMGL-like PACID_RS07075 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_RS07080 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS07085 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS07100 PF01255 Putative undecaprenyl diphosphate synthase PACID_RS07110 PF05922 Peptidase inhibitor I9 PACID_RS07110 PF00082 Subtilase family PACID_RS07115 PF02565 Recombination protein O C terminal PACID_RS07115 PF11967 Recombination protein O N terminal PACID_RS07125 PF06100 MCRA family PACID_RS07155 PF00239 Resolvase, N terminal domain PACID_RS07155 PF02796 Helix-turn-helix domain of resolvase PACID_RS07320 PF07726 ATPase family associated with various cellular activities (AAA) PACID_RS07320 PF17863 AAA lid domain PACID_RS07325 PF01882 Protein of unknown function DUF58 PACID_RS07330 PF13519 von Willebrand factor type A domain PACID_RS07330 PF07584 Aerotolerance regulator N-terminal PACID_RS07335 PF07584 Aerotolerance regulator N-terminal PACID_RS07335 PF13519 von Willebrand factor type A domain PACID_RS07340 PF01168 Alanine racemase, N-terminal domain PACID_RS07350 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_RS07350 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_RS07355 PF00550 Phosphopantetheine attachment site PACID_RS07360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PACID_RS07360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PACID_RS07365 PF00698 Acyl transferase domain PACID_RS07370 PF02558 Ketopantoate reductase PanE/ApbA PACID_RS07370 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_RS07380 PF13556 PucR C-terminal helix-turn-helix domain PACID_RS07380 PF17853 GGDEF-like domain PACID_RS07385 PF17831 Pyruvate dehydrogenase E1 component middle domain PACID_RS07385 PF00456 Transketolase, thiamine diphosphate binding domain PACID_RS07390 PF11253 Protein of unknown function (DUF3052) PACID_RS07395 PF00248 Aldo/keto reductase family PACID_RS07405 PF00156 Phosphoribosyl transferase domain PACID_RS07410 PF01979 Amidohydrolase family PACID_RS07415 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PACID_RS07415 PF00117 Glutamine amidotransferase class-I PACID_RS07420 PF02142 MGS-like domain PACID_RS07420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_RS07420 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PACID_RS07425 PF00175 Oxidoreductase NAD-binding domain PACID_RS07425 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PACID_RS07430 PF01180 Dihydroorotate dehydrogenase PACID_RS07435 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PACID_RS07440 PF00156 Phosphoribosyl transferase domain PACID_RS07455 PF01230 HIT domain PACID_RS07470 PF00919 Uncharacterized protein family UPF0004 PACID_RS07470 PF18693 TRAM domain PACID_RS07470 PF04055 Radical SAM superfamily PACID_RS07475 PF01066 CDP-alcohol phosphatidyltransferase PACID_RS07480 PF02464 Competence-damaged protein PACID_RS07480 PF18146 Damage-inducible protein CinA KH domain PACID_RS07480 PF00994 Probable molybdopterin binding domain PACID_RS07490 PF08220 DeoR-like helix-turn-helix domain PACID_RS07490 PF00455 DeoR C terminal sensor domain PACID_RS07500 PF00154 recA bacterial DNA recombination protein PACID_RS07505 PF02631 RecX family PACID_RS07510 PF01966 HD domain PACID_RS07510 PF00013 KH domain PACID_RS07510 PF12072 Domain of unknown function (DUF3552) PACID_RS07515 PF01263 Aldose 1-epimerase PACID_RS07520 PF04055 Radical SAM superfamily PACID_RS07520 PF00919 Uncharacterized protein family UPF0004 PACID_RS07765 PF00872 Transposase, Mutator family PACID_RS07850 PF01678 Diaminopimelate epimerase PACID_RS07855 PF01926 50S ribosome-binding GTPase PACID_RS07855 PF16360 GTP-binding GTPase Middle Region PACID_RS07855 PF13167 GTP-binding GTPase N-terminal PACID_RS07860 PF13307 Helicase C-terminal domain PACID_RS07870 PF03477 ATP cone domain PACID_RS07875 PF08471 Class II vitamin B12-dependent ribonucleotide reductase PACID_RS07875 PF02867 Ribonucleotide reductase, barrel domain PACID_RS07880 PF00692 dUTPase PACID_RS07900 PF11898 Domain of unknown function (DUF3418) PACID_RS07900 PF00271 Helicase conserved C-terminal domain PACID_RS07900 PF00270 DEAD/DEAH box helicase PACID_RS07900 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PACID_RS07900 PF04408 Helicase associated domain (HA2) PACID_RS07905 PF04545 Sigma-70, region 4 PACID_RS07905 PF04539 Sigma-70 region 3 PACID_RS07905 PF04542 Sigma-70 region 2 PACID_RS07905 PF00140 Sigma-70 factor, region 1.2 PACID_RS07910 PF04545 Sigma-70, region 4 PACID_RS07910 PF04539 Sigma-70 region 3 PACID_RS07910 PF04542 Sigma-70 region 2 PACID_RS07910 PF00140 Sigma-70 factor, region 1.2 PACID_RS07925 PF00204 DNA gyrase B PACID_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS07925 PF00986 DNA gyrase B subunit, carboxyl terminus PACID_RS07925 PF01751 Toprim domain PACID_RS07940 PF00484 Carbonic anhydrase PACID_RS07945 PF03989 DNA gyrase C-terminal domain, beta-propeller PACID_RS07945 PF00521 DNA gyrase/topoisomerase IV, subunit A PACID_RS07960 PF03169 OPT oligopeptide transporter protein PACID_RS07975 PF11268 Protein of unknown function (DUF3071) PACID_RS07995 PF00692 dUTPase PACID_RS08010 PF02080 TrkA-C domain PACID_RS08010 PF02254 TrkA-N domain PACID_RS08015 PF02254 TrkA-N domain PACID_RS08015 PF02080 TrkA-C domain PACID_RS08020 PF13520 Amino acid permease PACID_RS08025 PF01938 TRAM domain PACID_RS08025 PF05958 tRNA (Uracil-5-)-methyltransferase PACID_RS08030 PF00694 Aconitase C-terminal domain PACID_RS08030 PF00330 Aconitase family (aconitate hydratase) PACID_RS08035 PF02780 Transketolase, C-terminal domain PACID_RS08035 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PACID_RS08035 PF02779 Transketolase, pyrimidine binding domain PACID_RS08050 PF01641 SelR domain PACID_RS08055 PF03976 Polyphosphate kinase 2 (PPK2) PACID_RS08115 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS08115 PF00107 Zinc-binding dehydrogenase PACID_RS08120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PACID_RS08120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_RS08120 PF03129 Anticodon binding domain PACID_RS08125 PF01230 HIT domain PACID_RS08130 PF01066 CDP-alcohol phosphatidyltransferase PACID_RS08135 PF03279 Bacterial lipid A biosynthesis acyltransferase PACID_RS08140 PF13439 Glycosyltransferase Family 4 PACID_RS08145 PF01066 CDP-alcohol phosphatidyltransferase PACID_RS08150 PF05949 Bacterial protein of unknown function (DUF881) PACID_RS08155 PF06947 Protein of unknown function (DUF1290) PACID_RS08160 PF05949 Bacterial protein of unknown function (DUF881) PACID_RS08165 PF01597 Glycine cleavage H-protein PACID_RS08170 PF00498 FHA domain PACID_RS08175 PF00376 MerR family regulatory protein PACID_RS08180 PF02577 Bifunctional nuclease PACID_RS08185 PF13411 MerR HTH family regulatory protein PACID_RS08190 PF03631 Virulence factor BrkB PACID_RS08195 PF00365 Phosphofructokinase PACID_RS08205 PF01300 Telomere recombination PACID_RS08210 PF01048 Phosphorylase superfamily PACID_RS08215 PF00781 Diacylglycerol kinase catalytic domain PACID_RS08225 PF09186 Domain of unknown function (DUF1949) PACID_RS08225 PF01205 Uncharacterized protein family UPF0029 PACID_RS08240 PF00012 Hsp70 protein PACID_RS08250 PF03167 Uracil DNA glycosylase superfamily PACID_RS08260 PF07238 PilZ domain PACID_RS08260 PF00535 Glycosyl transferase family 2 PACID_RS08275 PF13520 Amino acid permease PACID_RS08295 PF02554 Carbon starvation protein CstA PACID_RS08295 PF13722 5TM C-terminal transporter carbon starvation CstA PACID_RS08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS08300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_RS08305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PACID_RS08310 PF08543 Phosphomethylpyrimidine kinase PACID_RS08320 PF13397 RNA polymerase-binding protein PACID_RS08325 PF00535 Glycosyl transferase family 2 PACID_RS08330 PF00795 Carbon-nitrogen hydrolase PACID_RS08335 PF01037 Lrp/AsnC ligand binding domain PACID_RS08340 PF07021 Methionine biosynthesis protein MetW PACID_RS08340 PF00561 alpha/beta hydrolase fold PACID_RS08345 PF00561 alpha/beta hydrolase fold PACID_RS08350 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_RS08350 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PACID_RS08355 PF00248 Aldo/keto reductase family PACID_RS08405 PF13657 HipA N-terminal domain PACID_RS08405 PF07804 HipA-like C-terminal domain PACID_RS08480 PF00202 Aminotransferase class-III PACID_RS08500 PF00392 Bacterial regulatory proteins, gntR family PACID_RS08500 PF00155 Aminotransferase class I and II PACID_RS08510 PF00149 Calcineurin-like phosphoesterase PACID_RS08540 PF18766 SWI2/SNF2 ATPase PACID_RS08540 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_RS08540 PF11867 Domain of unknown function (DUF3387) PACID_RS08550 PF00872 Transposase, Mutator family PACID_RS08555 PF12161 HsdM N-terminal domain PACID_RS08555 PF02384 N-6 DNA Methylase PACID_RS08565 PF00293 NUDIX domain PACID_RS08570 PF02566 OsmC-like protein PACID_RS08580 PF01926 50S ribosome-binding GTPase PACID_RS08580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PACID_RS08585 PF02224 Cytidylate kinase PACID_RS08595 PF00227 Proteasome subunit PACID_RS08600 PF00227 Proteasome subunit PACID_RS08610 PF08704 tRNA methyltransferase complex GCD14 subunit PACID_RS08615 PF02310 B12 binding domain PACID_RS08615 PF02607 B12 binding domain PACID_RS08615 PF02965 Vitamin B12 dependent methionine synthase, activation domain PACID_RS08615 PF00809 Pterin binding enzyme PACID_RS08615 PF02574 Homocysteine S-methyltransferase PACID_RS08625 PF00834 Ribulose-phosphate 3 epimerase family PACID_RS08630 PF01189 16S rRNA methyltransferase RsmB/F PACID_RS08630 PF01029 NusB family PACID_RS08635 PF00551 Formyl transferase PACID_RS08635 PF02911 Formyl transferase, C-terminal domain PACID_RS08640 PF17764 3′ DNA-binding domain (3′BD) PACID_RS08665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_RS08665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_RS08670 PF00270 DEAD/DEAH box helicase PACID_RS08670 PF08494 DEAD/H associated PACID_RS08670 PF00271 Helicase conserved C-terminal domain PACID_RS08675 PF00438 S-adenosylmethionine synthetase, N-terminal domain PACID_RS08675 PF02773 S-adenosylmethionine synthetase, C-terminal domain PACID_RS08675 PF02772 S-adenosylmethionine synthetase, central domain PACID_RS08680 PF04127 DNA / pantothenate metabolism flavoprotein PACID_RS08680 PF02441 Flavoprotein PACID_RS08685 PF01192 RNA polymerase Rpb6 PACID_RS08690 PF00625 Guanylate kinase PACID_RS08700 PF01029 NusB family PACID_RS08705 PF08207 Elongation factor P (EF-P) KOW-like domain PACID_RS08705 PF09285 Elongation factor P, C-terminal PACID_RS08705 PF01132 Elongation factor P (EF-P) OB domain PACID_RS08715 PF01761 3-dehydroquinate synthase PACID_RS08720 PF01202 Shikimate kinase PACID_RS08725 PF01264 Chorismate synthase PACID_RS08730 PF08501 Shikimate dehydrogenase substrate binding domain PACID_RS08730 PF01488 Shikimate / quinate 5-dehydrogenase PACID_RS08730 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PACID_RS08735 PF02618 YceG-like family PACID_RS08740 PF03652 Holliday junction resolvase PACID_RS08745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PACID_RS08745 PF02272 DHHA1 domain PACID_RS08745 PF01411 tRNA synthetases class II (A) PACID_RS08765 PF12002 MgsA AAA+ ATPase C terminal PACID_RS08765 PF16193 AAA C-terminal domain PACID_RS08765 PF00004 ATPase family associated with various cellular activities (AAA) PACID_RS08780 PF02938 GAD domain PACID_RS08780 PF00152 tRNA synthetases class II (D, K and N) PACID_RS08780 PF01336 OB-fold nucleic acid binding domain PACID_RS08795 PF09209 Tetracyclin repressor-like, C-terminal domain PACID_RS08795 PF00440 Bacterial regulatory proteins, tetR family PACID_RS08800 PF01869 BadF/BadG/BcrA/BcrD ATPase family PACID_RS08805 PF13393 Histidyl-tRNA synthetase PACID_RS08805 PF03129 Anticodon binding domain PACID_RS08810 PF00753 Metallo-beta-lactamase superfamily PACID_RS08815 PF03993 Domain of Unknown Function (DUF349) PACID_RS08820 PF00291 Pyridoxal-phosphate dependent enzyme PACID_RS08820 PF14821 Threonine synthase N terminus PACID_RS08825 PF13291 ACT domain PACID_RS08825 PF04607 Region found in RelA / SpoT proteins PACID_RS08825 PF02824 TGS domain PACID_RS08835 PF00156 Phosphoribosyl transferase domain PACID_RS08840 PF07549 SecD/SecF GG Motif PACID_RS08840 PF02355 Protein export membrane protein PACID_RS08845 PF07549 SecD/SecF GG Motif PACID_RS08845 PF02355 Protein export membrane protein PACID_RS08855 PF05496 Holliday junction DNA helicase RuvB P-loop domain PACID_RS08855 PF05491 RuvB C-terminal winged helix domain PACID_RS08855 PF17864 RuvB AAA lid domain PACID_RS08860 PF01330 RuvA N terminal domain PACID_RS08860 PF07499 RuvA, C-terminal domain PACID_RS08865 PF02075 Crossover junction endodeoxyribonuclease RuvC PACID_RS08870 PF01709 Transcriptional regulator PACID_RS08875 PF00977 Histidine biosynthesis protein PACID_RS08880 PF00117 Glutamine amidotransferase class-I PACID_RS08885 PF00475 Imidazoleglycerol-phosphate dehydratase PACID_RS08890 PF00155 Aminotransferase class I and II PACID_RS08895 PF00815 Histidinol dehydrogenase PACID_RS08905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PACID_RS08905 PF07733 Bacterial DNA polymerase III alpha NTPase domain PACID_RS08905 PF14579 Helix-hairpin-helix motif PACID_RS08905 PF02811 PHP domain PACID_RS08925 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS08930 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS08935 PF00232 Glycosyl hydrolase family 1 PACID_RS08940 PF00356 Bacterial regulatory proteins, lacI family PACID_RS08945 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS08945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PACID_RS08950 PF01493 GXGXG motif PACID_RS08950 PF01645 Conserved region in glutamate synthase PACID_RS08950 PF04898 Glutamate synthase central domain PACID_RS08950 PF00310 Glutamine amidotransferases class-II PACID_RS08955 PF01790 Prolipoprotein diacylglyceryl transferase PACID_RS08960 PF00290 Tryptophan synthase alpha chain PACID_RS08965 PF00291 Pyridoxal-phosphate dependent enzyme PACID_RS08970 PF00218 Indole-3-glycerol phosphate synthase PACID_RS08985 PF00425 chorismate binding enzyme PACID_RS08985 PF04715 Anthranilate synthase component I, N terminal region PACID_RS08990 PF01502 Phosphoribosyl-AMP cyclohydrolase PACID_RS09000 PF01475 Ferric uptake regulator family PACID_RS09010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_RS09010 PF03129 Anticodon binding domain PACID_RS09015 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PACID_RS09015 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PACID_RS09020 PF02910 Fumarate reductase flavoprotein C-term PACID_RS09020 PF00890 FAD binding domain PACID_RS09025 PF02445 Quinolinate synthetase A protein PACID_RS09035 PF00282 Pyridoxal-dependent decarboxylase conserved domain PACID_RS09045 PF02910 Fumarate reductase flavoprotein C-term PACID_RS09045 PF00890 FAD binding domain PACID_RS09070 PF01207 Dihydrouridine synthase (Dus) PACID_RS09085 PF01966 HD domain PACID_RS09085 PF13286 Phosphohydrolase-associated domain PACID_RS09090 PF13662 Toprim domain PACID_RS09090 PF01807 CHC2 zinc finger PACID_RS09090 PF08278 DNA primase DnaG DnaB-binding PACID_RS09090 PF08275 DNA primase catalytic core, N-terminal domain PACID_RS09090 PF10410 DnaB-helicase binding domain of primase PACID_RS09095 PF04545 Sigma-70, region 4 PACID_RS09095 PF04542 Sigma-70 region 2 PACID_RS09095 PF04539 Sigma-70 region 3 PACID_RS09110 PF12848 ABC transporter PACID_RS09110 PF00005 ABC transporter PACID_RS09115 PF00982 Glycosyltransferase family 20 PACID_RS09125 PF00291 Pyridoxal-phosphate dependent enzyme PACID_RS09135 PF00392 Bacterial regulatory proteins, gntR family PACID_RS09140 PF01680 SOR/SNZ family PACID_RS09145 PF01174 SNO glutamine amidotransferase family PACID_RS09150 PF01810 LysE type translocator PACID_RS09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_RS09155 PF03466 LysR substrate binding domain PACID_RS09175 PF07690 Major Facilitator Superfamily PACID_RS09190 PF00589 Phage integrase family PACID_RS09190 PF02899 Phage integrase, N-terminal SAM-like domain PACID_RS09205 PF13614 AAA domain PACID_RS09255 PF00899 ThiF family PACID_RS09255 PF14461 Prokaryotic E2 family B PACID_RS09265 PF02796 Helix-turn-helix domain of resolvase PACID_RS09265 PF00239 Resolvase, N terminal domain PACID_RS09275 PF01022 Bacterial regulatory protein, arsR family PACID_RS09280 PF00239 Resolvase, N terminal domain PACID_RS09280 PF02796 Helix-turn-helix domain of resolvase PACID_RS09290 PF13401 AAA domain PACID_RS09325 PF02637 GatB domain PACID_RS09325 PF02934 GatB/GatE catalytic domain PACID_RS09330 PF01425 Amidase PACID_RS09335 PF02686 Glu-tRNAGln amidotransferase C subunit PACID_RS09350 PF09084 NMT1/THI5 like PACID_RS09360 PF00005 ABC transporter PACID_RS09380 PF00266 Aminotransferase class-V PACID_RS09385 PF00128 Alpha amylase, catalytic domain PACID_RS09385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_RS09395 PF00343 Carbohydrate phosphorylase PACID_RS09395 PF11897 Protein of unknown function (DUF3417) PACID_RS09400 PF11896 Domain of unknown function (DUF3416) PACID_RS09405 PF18085 Maltokinase N-terminal cap domain PACID_RS09410 PF00128 Alpha amylase, catalytic domain PACID_RS09410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_RS09410 PF02806 Alpha amylase, C-terminal all-beta domain PACID_RS09415 PF02378 Phosphotransferase system, EIIC PACID_RS09415 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PACID_RS09415 PF00367 phosphotransferase system, EIIB PACID_RS09420 PF03636 Glycosyl hydrolase family 65, N-terminal domain PACID_RS09420 PF03632 Glycosyl hydrolase family 65 central catalytic domain PACID_RS09420 PF03633 Glycosyl hydrolase family 65, C-terminal domain PACID_RS09425 PF13419 Haloacid dehalogenase-like hydrolase PACID_RS09430 PF00085 Thioredoxin PACID_RS09435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_RS09435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_RS09435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_RS09435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_RS09455 PF01939 Endonuclease NucS PACID_RS09465 PF00561 alpha/beta hydrolase fold PACID_RS09470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PACID_RS09475 PF01923 Cobalamin adenosyltransferase PACID_RS09485 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PACID_RS09490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_RS09490 PF02874 ATP synthase alpha/beta family, beta-barrel domain PACID_RS09495 PF00231 ATP synthase PACID_RS09500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_RS09500 PF02874 ATP synthase alpha/beta family, beta-barrel domain PACID_RS09500 PF00306 ATP synthase alpha/beta chain, C terminal domain PACID_RS09505 PF00213 ATP synthase delta (OSCP) subunit PACID_RS09510 PF00430 ATP synthase B/B' CF(0) PACID_RS09515 PF00137 ATP synthase subunit C PACID_RS09520 PF00119 ATP synthase A chain PACID_RS09535 PF06426 Serine acetyltransferase, N-terminal PACID_RS09535 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_RS09545 PF00733 Asparagine synthase PACID_RS09545 PF13537 Glutamine amidotransferase domain PACID_RS09550 PF02540 NAD synthase PACID_RS09560 PF13193 AMP-binding enzyme C-terminal domain PACID_RS09560 PF00501 AMP-binding enzyme PACID_RS09575 PF00733 Asparagine synthase PACID_RS09575 PF13537 Glutamine amidotransferase domain PACID_RS09635 PF00953 Glycosyl transferase family 4 PACID_RS09640 PF01300 Telomere recombination PACID_RS09645 PF13649 Methyltransferase domain PACID_RS09645 PF17827 PrmC N-terminal domain PACID_RS09650 PF03462 PCRF domain PACID_RS09650 PF00472 RF-1 domain PACID_RS09655 PF01197 Ribosomal protein L31 PACID_RS09660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_RS09660 PF07497 Rho termination factor, RNA-binding domain PACID_RS09660 PF07498 Rho termination factor, N-terminal domain PACID_RS09665 PF00288 GHMP kinases N terminal domain PACID_RS09665 PF08544 GHMP kinases C terminal PACID_RS09670 PF01842 ACT domain PACID_RS09670 PF00742 Homoserine dehydrogenase PACID_RS09670 PF03447 Homoserine dehydrogenase, NAD binding domain PACID_RS09675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PACID_RS09675 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PACID_RS09685 PF03641 Possible lysine decarboxylase PACID_RS09695 PF00676 Dehydrogenase E1 component PACID_RS09695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_RS09695 PF16078 2-oxoglutarate dehydrogenase N-terminus PACID_RS09695 PF16870 2-oxoglutarate dehydrogenase C-terminal PACID_RS09695 PF02779 Transketolase, pyrimidine binding domain PACID_RS09705 PF02467 Transcription factor WhiB PACID_RS09710 PF12282 Signal transduction histidine kinase PACID_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS09710 PF07568 Histidine kinase PACID_RS09720 PF08281 Sigma-70, region 4 PACID_RS09720 PF04542 Sigma-70 region 2 PACID_RS09730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PACID_RS09735 PF03193 RsgA GTPase PACID_RS09745 PF00459 Inositol monophosphatase family PACID_RS09750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_RS09750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_RS09755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS09755 PF00005 ABC transporter PACID_RS09760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS09760 PF00005 ABC transporter PACID_RS09765 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_RS09765 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS09770 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS09775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_RS09795 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_RS09795 PF14310 Fibronectin type III-like domain PACID_RS09795 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_RS09805 PF03699 Uncharacterised protein family (UPF0182) PACID_RS09815 PF13180 PDZ domain PACID_RS09815 PF05362 Lon protease (S16) C-terminal proteolytic domain PACID_RS09835 PF13361 UvrD-like helicase C-terminal domain PACID_RS09835 PF00570 HRDC domain PACID_RS09835 PF00580 UvrD/REP helicase N-terminal domain PACID_RS09840 PF17946 RecC C-terminal domain PACID_RS09845 PF12705 PD-(D/E)XK nuclease superfamily PACID_RS09845 PF13361 UvrD-like helicase C-terminal domain PACID_RS09845 PF00580 UvrD/REP helicase N-terminal domain PACID_RS09850 PF13538 UvrD-like helicase C-terminal domain PACID_RS09855 PF13361 UvrD-like helicase C-terminal domain PACID_RS09855 PF00580 UvrD/REP helicase N-terminal domain PACID_RS09860 PF00580 UvrD/REP helicase N-terminal domain PACID_RS09860 PF13361 UvrD-like helicase C-terminal domain PACID_RS09865 PF00313 'Cold-shock' DNA-binding domain PACID_RS09885 PF00271 Helicase conserved C-terminal domain PACID_RS09885 PF00270 DEAD/DEAH box helicase PACID_RS09890 PF00579 tRNA synthetases class I (W and Y) PACID_RS09900 PF02811 PHP domain PACID_RS09920 PF07516 SecA Wing and Scaffold domain PACID_RS09920 PF07517 SecA DEAD-like domain PACID_RS09920 PF01043 SecA preprotein cross-linking domain PACID_RS09930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PACID_RS09930 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus PACID_RS09945 PF00672 HAMP domain PACID_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS09945 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS09950 PF00072 Response regulator receiver domain PACID_RS09950 PF00486 Transcriptional regulatory protein, C terminal PACID_RS09955 PF02622 Uncharacterized ACR, COG1678 PACID_RS09970 PF14698 Argininosuccinate lyase C-terminal PACID_RS09970 PF00206 Lyase PACID_RS09975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PACID_RS09975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PACID_RS09980 PF00202 Aminotransferase class-III PACID_RS09985 PF00696 Amino acid kinase family PACID_RS09990 PF01960 ArgJ family PACID_RS09995 PF02774 Semialdehyde dehydrogenase, dimerisation domain PACID_RS09995 PF01118 Semialdehyde dehydrogenase, NAD binding domain PACID_RS10000 PF01668 SmpB protein PACID_RS10005 PF02687 FtsX-like permease family PACID_RS10005 PF18075 FtsX extracellular domain PACID_RS10010 PF00005 ABC transporter PACID_RS10015 PF03462 PCRF domain PACID_RS10015 PF00472 RF-1 domain PACID_RS10040 PF09397 Ftsk gamma domain PACID_RS10040 PF17854 FtsK alpha domain PACID_RS10040 PF01580 FtsK/SpoIIIE family PACID_RS10045 PF00586 AIR synthase related protein, N-terminal domain PACID_RS10045 PF02769 AIR synthase related protein, C-terminal domain PACID_RS10055 PF07478 D-ala D-ala ligase C-terminus PACID_RS10055 PF01820 D-ala D-ala ligase N-terminus PACID_RS10065 PF00694 Aconitase C-terminal domain PACID_RS10070 PF00330 Aconitase family (aconitate hydratase) PACID_RS10075 PF09339 IclR helix-turn-helix domain PACID_RS10075 PF01614 Bacterial transcriptional regulator PACID_RS10095 PF01557 Fumarylacetoacetate (FAA) hydrolase family PACID_RS10100 PF00591 Glycosyl transferase family, a/b domain PACID_RS10100 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PACID_RS10100 PF02885 Glycosyl transferase family, helical bundle domain PACID_RS10105 PF08502 LeuA allosteric (dimerisation) domain PACID_RS10105 PF00682 HMGL-like PACID_RS10110 PF01063 Amino-transferase class IV PACID_RS10115 PF00180 Isocitrate/isopropylmalate dehydrogenase PACID_RS10135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PACID_RS10135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PACID_RS10140 PF10369 Small subunit of acetolactate synthase PACID_RS10145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_RS10145 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_RS10145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_RS10150 PF01230 HIT domain PACID_RS10155 PF00977 Histidine biosynthesis protein PACID_RS10160 PF00270 DEAD/DEAH box helicase PACID_RS10160 PF08148 DSHCT (NUC185) domain PACID_RS10160 PF00271 Helicase conserved C-terminal domain PACID_RS10165 PF00781 Diacylglycerol kinase catalytic domain PACID_RS10170 PF00902 Sec-independent protein translocase protein (TatC) PACID_RS10175 PF02416 mttA/Hcf106 family PACID_RS10185 PF13280 WYL domain PACID_RS10190 PF13280 WYL domain PACID_RS10195 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_RS10205 PF00849 RNA pseudouridylate synthase PACID_RS10205 PF01479 S4 domain PACID_RS10215 PF13614 AAA domain PACID_RS10220 PF00589 Phage integrase family PACID_RS10220 PF02899 Phage integrase, N-terminal SAM-like domain PACID_RS10230 PF06418 CTP synthase N-terminus PACID_RS10230 PF00117 Glutamine amidotransferase class-I PACID_RS10235 PF02463 RecF/RecN/SMC N terminal domain PACID_RS10240 PF01513 ATP-NAD kinase PACID_RS10245 PF01728 FtsJ-like methyltransferase PACID_RS10245 PF01479 S4 domain PACID_RS10250 PF02361 Cobalt transport protein PACID_RS10255 PF00005 ABC transporter PACID_RS10260 PF02632 BioY family PACID_RS10265 PF13344 Haloacid dehalogenase-like hydrolase PACID_RS10265 PF18407 GCN5-related N-acetyltransferase like domain PACID_RS10300 PF01634 ATP phosphoribosyltransferase PACID_RS10300 PF08029 HisG, C-terminal domain PACID_RS10305 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PACID_RS10310 PF04973 Nicotinamide mononucleotide transporter PACID_RS10320 PF00248 Aldo/keto reductase family PACID_RS10325 PF00285 Citrate synthase, C-terminal domain PACID_RS10330 PF07687 Peptidase dimerisation domain PACID_RS10330 PF01546 Peptidase family M20/M25/M40 PACID_RS10360 PF00356 Bacterial regulatory proteins, lacI family PACID_RS10365 PF11762 L-arabinose isomerase C-terminal domain PACID_RS10365 PF02610 L-arabinose isomerase PACID_RS10370 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_RS10375 PF00083 Sugar (and other) transporter PACID_RS10380 PF00356 Bacterial regulatory proteins, lacI family PACID_RS10385 PF13416 Bacterial extracellular solute-binding protein PACID_RS10395 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS10405 PF00356 Bacterial regulatory proteins, lacI family PACID_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS10425 PF06964 Alpha-L-arabinofuranosidase C-terminal domain PACID_RS10440 PF13335 Magnesium chelatase, subunit ChlI C-terminal PACID_RS10440 PF01078 Magnesium chelatase, subunit ChlI PACID_RS10445 PF02021 Uncharacterised protein family UPF0102 PACID_RS10450 PF10611 Protein of unknown function (DUF2469) PACID_RS10455 PF01351 Ribonuclease HII PACID_RS10460 PF10502 Signal peptidase, peptidase S26 PACID_RS10465 PF01245 Ribosomal protein L19 PACID_RS10470 PF13085 2Fe-2S iron-sulfur cluster binding domain PACID_RS10470 PF13183 4Fe-4S dicluster domain PACID_RS10475 PF02910 Fumarate reductase flavoprotein C-term PACID_RS10475 PF00890 FAD binding domain PACID_RS10485 PF01746 tRNA (Guanine-1)-methyltransferase PACID_RS10490 PF05239 PRC-barrel domain PACID_RS10490 PF01782 RimM N-terminal domain PACID_RS10500 PF00886 Ribosomal protein S16 PACID_RS10505 PF01979 Amidohydrolase family PACID_RS10510 PF00448 SRP54-type protein, GTPase domain PACID_RS10510 PF02978 Signal peptide binding domain PACID_RS10510 PF02881 SRP54-type protein, helical bundle domain PACID_RS10540 PF00448 SRP54-type protein, GTPase domain PACID_RS10540 PF02881 SRP54-type protein, helical bundle domain PACID_RS10575 PF00248 Aldo/keto reductase family PACID_RS10580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_RS10580 PF06827 Zinc finger found in FPG and IleRS PACID_RS10580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_RS10585 PF00035 Double-stranded RNA binding motif PACID_RS10585 PF14622 Ribonuclease-III-like PACID_RS10590 PF01783 Ribosomal L32p protein family PACID_RS10595 PF02620 Large ribosomal RNA subunit accumulation protein YceD PACID_RS10600 PF01467 Cytidylyltransferase-like PACID_RS10610 PF12900 Pyridoxamine 5'-phosphate oxidase PACID_RS10615 PF00270 DEAD/DEAH box helicase PACID_RS10615 PF00271 Helicase conserved C-terminal domain PACID_RS10615 PF17191 RecG wedge domain PACID_RS10625 PF00830 Ribosomal L28 family PACID_RS10630 PF12706 Beta-lactamase superfamily domain PACID_RS10630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PACID_RS10630 PF17770 Ribonuclease J C-terminal domain PACID_RS10640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_RS10640 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_RS10640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_RS10650 PF01113 Dihydrodipicolinate reductase, N-terminus PACID_RS10650 PF05173 Dihydrodipicolinate reductase, C-terminus PACID_RS10655 PF00575 S1 RNA binding domain PACID_RS10655 PF01138 3' exoribonuclease family, domain 1 PACID_RS10655 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PACID_RS10655 PF00013 KH domain PACID_RS10660 PF00312 Ribosomal protein S15 PACID_RS10665 PF01687 Riboflavin kinase PACID_RS10665 PF06574 FAD synthetase PACID_RS10680 PF01509 TruB family pseudouridylate synthase (N terminal domain) PACID_RS10680 PF16198 tRNA pseudouridylate synthase B C-terminal domain PACID_RS10680 PF09142 tRNA Pseudouridine synthase II, C terminal PACID_RS10695 PF03608 PTS system enzyme II sorbitol-specific factor PACID_RS10700 PF03612 Sorbitol phosphotransferase enzyme II N-terminus PACID_RS10700 PF07663 Sorbitol phosphotransferase enzyme II C-terminus PACID_RS10705 PF03829 PTS system glucitol/sorbitol-specific IIA component PACID_RS10715 PF13685 Iron-containing alcohol dehydrogenase PACID_RS10720 PF02033 Ribosome-binding factor A PACID_RS10725 PF03109 ABC1 family PACID_RS10730 PF11987 Translation-initiation factor 2 PACID_RS10730 PF00009 Elongation factor Tu GTP binding domain PACID_RS10730 PF04760 Translation initiation factor IF-2, N-terminal region PACID_RS10740 PF13184 NusA-like KH domain PACID_RS10740 PF08529 NusA N-terminal domain PACID_RS10745 PF02576 RimP N-terminal domain PACID_RS10745 PF17384 RimP C-terminal SH3 domain PACID_RS10755 PF01925 Sulfite exporter TauE/SafE PACID_RS10765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_RS10765 PF04073 Aminoacyl-tRNA editing domain PACID_RS10765 PF03129 Anticodon binding domain PACID_RS10775 PF08379 Bacterial transglutaminase-like N-terminal region PACID_RS10775 PF01841 Transglutaminase-like superfamily PACID_RS10780 PF04168 A predicted alpha-helical domain with a conserved ER motif. PACID_RS10780 PF14403 Circularly permuted ATP-grasp type 2 PACID_RS10785 PF04174 A circularly permuted ATPgrasp PACID_RS10790 PF07731 Multicopper oxidase PACID_RS10790 PF07732 Multicopper oxidase PACID_RS10805 PF04551 GcpE protein PACID_RS10810 PF02163 Peptidase family M50 PACID_RS10810 PF17820 PDZ domain PACID_RS10820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PACID_RS10820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PACID_RS10825 PF04055 Radical SAM superfamily PACID_RS10835 PF01765 Ribosome recycling factor PACID_RS10840 PF00696 Amino acid kinase family PACID_RS10845 PF00889 Elongation factor TS PACID_RS10850 PF00318 Ribosomal protein S2 PACID_RS10865 PF07728 AAA domain (dynein-related subfamily) PACID_RS10875 PF05762 VWA domain containing CoxE-like protein PACID_RS10895 PF02899 Phage integrase, N-terminal SAM-like domain PACID_RS10895 PF00589 Phage integrase family PACID_RS10905 PF01327 Polypeptide deformylase PACID_RS10925 PF00588 SpoU rRNA Methylase family PACID_RS10930 PF13593 SBF-like CPA transporter family (DUF4137) PACID_RS10935 PF01145 SPFH domain / Band 7 family PACID_RS10945 PF00005 ABC transporter PACID_RS10950 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PACID_RS10950 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PACID_RS10950 PF13288 DXP reductoisomerase C-terminal domain PACID_RS10960 PF00206 Lyase PACID_RS10960 PF10415 Fumarase C C-terminus PACID_RS11005 PF00005 ABC transporter PACID_RS11005 PF12848 ABC transporter PACID_RS11025 PF04228 Putative neutral zinc metallopeptidase PACID_RS11045 PF01883 Iron-sulfur cluster assembly protein PACID_RS11050 PF01592 NifU-like N terminal domain PACID_RS11055 PF00266 Aminotransferase class-V PACID_RS11060 PF00005 ABC transporter PACID_RS11065 PF00355 Rieske [2Fe-2S] domain PACID_RS11070 PF01458 Uncharacterized protein family (UPF0051) PACID_RS11075 PF01458 Uncharacterized protein family (UPF0051) PACID_RS11095 PF14785 Maltose transport system permease protein MalF P2 domain PACID_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS11105 PF00356 Bacterial regulatory proteins, lacI family PACID_RS11110 PF00872 Transposase, Mutator family PACID_RS11115 PF00356 Bacterial regulatory proteins, lacI family PACID_RS11120 PF03030 Inorganic H+ pyrophosphatase PACID_RS11125 PF00005 ABC transporter PACID_RS11135 PF02628 Cytochrome oxidase assembly protein PACID_RS11140 PF01040 UbiA prenyltransferase family PACID_RS11145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PACID_RS11145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PACID_RS11155 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PACID_RS11165 PF08264 Anticodon-binding domain of tRNA PACID_RS11165 PF00133 tRNA synthetases class I (I, L, M and V) PACID_RS11180 PF14685 Tricorn protease PDZ domain PACID_RS11180 PF07676 WD40-like Beta Propeller Repeat PACID_RS11180 PF14684 Tricorn protease C1 domain PACID_RS11180 PF03572 Peptidase family S41 PACID_RS11190 PF06689 ClpX C4-type zinc finger PACID_RS11190 PF07724 AAA domain (Cdc48 subfamily) PACID_RS11190 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_RS11195 PF00574 Clp protease PACID_RS11200 PF00574 Clp protease PACID_RS11205 PF01594 AI-2E family transporter PACID_RS11210 PF05698 Bacterial trigger factor protein (TF) C-terminus PACID_RS11210 PF05697 Bacterial trigger factor protein (TF) PACID_RS11210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PACID_RS11265 PF00872 Transposase, Mutator family PACID_RS11285 PF06616 BsuBI/PstI restriction endonuclease domain PACID_RS11285 PF17728 BsuBI/PstI restriction endonuclease HTH domain PACID_RS11290 PF07669 Eco57I restriction-modification methylase PACID_RS11305 PF16995 Transmembrane region of lysyl-tRNA synthetase PACID_RS11305 PF01336 OB-fold nucleic acid binding domain PACID_RS11305 PF00152 tRNA synthetases class II (D, K and N) PACID_RS11305 PF09924 Uncharacterised conserved protein (DUF2156) PACID_RS11315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_RS11315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_RS11315 PF06827 Zinc finger found in FPG and IleRS PACID_RS11325 PF02502 Ribose/Galactose Isomerase PACID_RS11330 PF13530 Sterol carrier protein domain PACID_RS11330 PF17668 Acetyltransferase (GNAT) domain PACID_RS11340 PF00533 BRCA1 C Terminus (BRCT) domain PACID_RS11340 PF12826 Helix-hairpin-helix motif PACID_RS11340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PACID_RS11340 PF03120 NAD-dependent DNA ligase OB-fold domain PACID_RS11340 PF01653 NAD-dependent DNA ligase adenylation domain PACID_RS11345 PF01323 DSBA-like thioredoxin domain PACID_RS11350 PF11838 ERAP1-like C-terminal domain PACID_RS11350 PF01433 Peptidase family M1 domain PACID_RS11360 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PACID_RS11360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PACID_RS11370 PF07690 Major Facilitator Superfamily PACID_RS11385 PF00501 AMP-binding enzyme PACID_RS11390 PF00501 AMP-binding enzyme PACID_RS11400 PF02913 FAD linked oxidases, C-terminal domain PACID_RS11400 PF13183 4Fe-4S dicluster domain PACID_RS11400 PF01565 FAD binding domain PACID_RS11405 PF00005 ABC transporter PACID_RS11405 PF12848 ABC transporter PACID_RS11435 PF00929 Exonuclease PACID_RS11455 PF00117 Glutamine amidotransferase class-I PACID_RS11455 PF13673 Acetyltransferase (GNAT) domain PACID_RS11455 PF03352 Methyladenine glycosylase PACID_RS11455 PF00958 GMP synthase C terminal domain PACID_RS11455 PF13302 Acetyltransferase (GNAT) domain PACID_RS11460 PF01177 Asp/Glu/Hydantoin racemase PACID_RS11480 PF00271 Helicase conserved C-terminal domain PACID_RS11480 PF00176 SNF2 family N-terminal domain PACID_RS11500 PF00440 Bacterial regulatory proteins, tetR family PACID_RS11520 PF01177 Asp/Glu/Hydantoin racemase PACID_RS11525 PF04073 Aminoacyl-tRNA editing domain PACID_RS11530 PF02567 Phenazine biosynthesis-like protein PACID_RS11535 PF13847 Methyltransferase domain PACID_RS11540 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_RS11555 PF00072 Response regulator receiver domain PACID_RS11555 PF00196 Bacterial regulatory proteins, luxR family PACID_RS11560 PF13492 GAF domain PACID_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS11560 PF07730 Histidine kinase PACID_RS11570 PF09383 NIL domain PACID_RS11570 PF00005 ABC transporter PACID_RS11580 PF00324 Amino acid permease PACID_RS11595 PF00005 ABC transporter PACID_RS11615 PF03601 Conserved hypothetical protein 698 PACID_RS11620 PF17760 UvrA interaction domain PACID_RS11620 PF00005 ABC transporter PACID_RS11620 PF17755 UvrA DNA-binding domain PACID_RS11625 PF13520 Amino acid permease PACID_RS11635 PF02811 PHP domain PACID_RS11635 PF14579 Helix-hairpin-helix motif PACID_RS11635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PACID_RS11635 PF07733 Bacterial DNA polymerase III alpha NTPase domain PACID_RS11655 PF01225 Mur ligase family, catalytic domain PACID_RS11655 PF08245 Mur ligase middle domain PACID_RS11655 PF02875 Mur ligase family, glutamate ligase domain PACID_RS11660 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_RS11670 PF00117 Glutamine amidotransferase class-I PACID_RS11675 PF00166 Chaperonin 10 Kd subunit PACID_RS11685 PF00578 AhpC/TSA family PACID_RS11700 PF11799 impB/mucB/samB family C-terminal domain PACID_RS11700 PF00817 impB/mucB/samB family PACID_RS11705 PF00186 Dihydrofolate reductase PACID_RS11710 PF00303 Thymidylate synthase PACID_RS11715 PF01725 Ham1 family PACID_RS11720 PF01138 3' exoribonuclease family, domain 1 PACID_RS11720 PF03725 3' exoribonuclease family, domain 2 PACID_RS11725 PF01177 Asp/Glu/Hydantoin racemase PACID_RS11735 PF07670 Nucleoside recognition PACID_RS11735 PF02421 Ferrous iron transport protein B PACID_RS11735 PF17910 FeoB cytosolic helical domain PACID_RS11735 PF04023 FeoA domain PACID_RS11735 PF07664 Ferrous iron transport protein B C terminus PACID_RS11750 PF02617 ATP-dependent Clp protease adaptor protein ClpS PACID_RS11755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PACID_RS11755 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PACID_RS11760 PF00216 Bacterial DNA-binding protein PACID_RS11765 PF02446 4-alpha-glucanotransferase PACID_RS11780 PF01220 Dehydroquinase class II PACID_RS11820 PF02467 Transcription factor WhiB PACID_RS11830 PF01050 Mannose-6-phosphate isomerase PACID_RS11830 PF00483 Nucleotidyl transferase PACID_RS11845 PF03816 Cell envelope-related transcriptional attenuator domain PACID_RS11850 PF00731 AIR carboxylase PACID_RS11855 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PACID_RS11855 PF02222 ATP-grasp domain PACID_RS11865 PF03575 Peptidase family S51 PACID_RS11875 PF01039 Carboxyl transferase domain PACID_RS11885 PF02545 Maf-like protein PACID_RS11895 PF00106 short chain dehydrogenase PACID_RS11905 PF08543 Phosphomethylpyrimidine kinase PACID_RS11915 PF00289 Biotin carboxylase, N-terminal domain PACID_RS11915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_RS11915 PF02785 Biotin carboxylase C-terminal domain PACID_RS11915 PF00364 Biotin-requiring enzyme PACID_RS11925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_RS11925 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS11930 PF01048 Phosphorylase superfamily PACID_RS11935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_RS11935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_RS11935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_RS11935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_RS11940 PF00501 AMP-binding enzyme PACID_RS11940 PF13193 AMP-binding enzyme C-terminal domain PACID_RS11950 PF00202 Aminotransferase class-III PACID_RS11955 PF13237 4Fe-4S dicluster domain PACID_RS11955 PF10531 SLBB domain PACID_RS11955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PACID_RS11955 PF13375 RnfC Barrel sandwich hybrid domain PACID_RS11960 PF09338 Glycine/sarcosine/betaine reductase component B subunits PACID_RS11970 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) PACID_RS11980 PF05544 Proline racemase PACID_RS11990 PF08264 Anticodon-binding domain of tRNA PACID_RS11990 PF09334 tRNA synthetases class I (M) PACID_RS11995 PF00075 RNase H PACID_RS12000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_RS12005 PF02653 Branched-chain amino acid transport system / permease component PACID_RS12010 PF02653 Branched-chain amino acid transport system / permease component PACID_RS12015 PF00005 ABC transporter PACID_RS12020 PF02608 ABC transporter substrate-binding protein PnrA-like PACID_RS12030 PF03471 Transporter associated domain PACID_RS12030 PF01595 Cyclin M transmembrane N-terminal domain PACID_RS12030 PF00571 CBS domain PACID_RS12040 PF03971 Monomeric isocitrate dehydrogenase PACID_RS12045 PF00551 Formyl transferase PACID_RS12050 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_RS12050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_RS12055 PF00171 Aldehyde dehydrogenase family PACID_RS12065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PACID_RS12065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PACID_RS12075 PF01808 AICARFT/IMPCHase bienzyme PACID_RS12075 PF02142 MGS-like domain PACID_RS12080 PF00551 Formyl transferase PACID_RS12085 PF00885 6,7-dimethyl-8-ribityllumazine synthase PACID_RS12090 PF00925 GTP cyclohydrolase II PACID_RS12090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PACID_RS12095 PF00677 Lumazine binding domain PACID_RS12100 PF01872 RibD C-terminal domain PACID_RS12100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_RS12115 PF00549 CoA-ligase PACID_RS12115 PF02629 CoA binding domain PACID_RS12120 PF08442 ATP-grasp domain PACID_RS12120 PF00549 CoA-ligase PACID_RS12130 PF13361 UvrD-like helicase C-terminal domain PACID_RS12130 PF00580 UvrD/REP helicase N-terminal domain PACID_RS12140 PF03180 NLPA lipoprotein PACID_RS12145 PF00005 ABC transporter PACID_RS12145 PF09383 NIL domain PACID_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS12155 PF13091 PLD-like domain PACID_RS12160 PF04226 Transglycosylase associated protein PACID_RS12165 PF00196 Bacterial regulatory proteins, luxR family PACID_RS12165 PF00072 Response regulator receiver domain PACID_RS12190 PF02540 NAD synthase PACID_RS12190 PF00117 Glutamine amidotransferase class-I PACID_RS12190 PF00958 GMP synthase C terminal domain PACID_RS12195 PF06426 Serine acetyltransferase, N-terminal PACID_RS12195 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_RS12200 PF02153 Prephenate dehydrogenase PACID_RS12200 PF01817 Chorismate mutase type II PACID_RS12205 PF00478 IMP dehydrogenase / GMP reductase domain PACID_RS12210 PF00571 CBS domain PACID_RS12210 PF00478 IMP dehydrogenase / GMP reductase domain PACID_RS12220 PF00118 TCP-1/cpn60 chaperonin family PACID_RS12225 PF00166 Chaperonin 10 Kd subunit PACID_RS12235 PF18096 THUMP domain-like PACID_RS12245 PF01875 Memo-like protein PACID_RS12260 PF03051 Peptidase C1-like family PACID_RS12265 PF00814 Glycoprotease family PACID_RS12275 PF00814 Glycoprotease family PACID_RS12275 PF00583 Acetyltransferase (GNAT) family PACID_RS12285 PF00271 Helicase conserved C-terminal domain PACID_RS12285 PF00270 DEAD/DEAH box helicase PACID_RS12290 PF13439 Glycosyltransferase Family 4 PACID_RS12290 PF00534 Glycosyl transferases group 1 PACID_RS12295 PF03853 YjeF-related protein N-terminus PACID_RS12295 PF01256 Carbohydrate kinase PACID_RS12300 PF01648 4'-phosphopantetheinyl transferase superfamily PACID_RS12305 PF01380 SIS domain PACID_RS12310 PF08241 Methyltransferase domain PACID_RS12315 PF00485 Phosphoribulokinase / Uridine kinase family PACID_RS12325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_RS12325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_RS12325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_RS12325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_RS12335 PF00380 Ribosomal protein S9/S16 PACID_RS12340 PF00572 Ribosomal protein L13 PACID_RS12360 PF02390 Putative methyltransferase PACID_RS12365 PF01416 tRNA pseudouridine synthase PACID_RS12370 PF05175 Methyltransferase small domain PACID_RS12370 PF08468 Methyltransferase small domain N-terminal PACID_RS12380 PF02361 Cobalt transport protein PACID_RS12385 PF00005 ABC transporter PACID_RS12395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PACID_RS12395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PACID_RS12400 PF00117 Glutamine amidotransferase class-I PACID_RS12400 PF00958 GMP synthase C terminal domain PACID_RS12400 PF02540 NAD synthase PACID_RS12410 PF13579 Glycosyl transferase 4-like domain PACID_RS12410 PF00534 Glycosyl transferases group 1 PACID_RS12415 PF01196 Ribosomal protein L17 PACID_RS12420 PF01000 RNA polymerase Rpb3/RpoA insert domain PACID_RS12420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PACID_RS12420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PACID_RS12425 PF01479 S4 domain PACID_RS12425 PF00163 Ribosomal protein S4/S9 N-terminal domain PACID_RS12430 PF00411 Ribosomal protein S11 PACID_RS12435 PF00416 Ribosomal protein S13/S18 PACID_RS12440 PF00444 Ribosomal protein L36 PACID_RS12445 PF01176 Translation initiation factor 1A / IF-1 PACID_RS12460 PF00557 Metallopeptidase family M24 PACID_RS12470 PF00344 SecY translocase PACID_RS12480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_RS12485 PF00005 ABC transporter PACID_RS12485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS12490 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS12490 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_RS12495 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS12500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PACID_RS12505 PF00327 Ribosomal protein L30p/L7e PACID_RS12510 PF00333 Ribosomal protein S5, N-terminal domain PACID_RS12510 PF03719 Ribosomal protein S5, C-terminal domain PACID_RS12515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PACID_RS12520 PF00347 Ribosomal protein L6 PACID_RS12525 PF00410 Ribosomal protein S8 PACID_RS12530 PF00253 Ribosomal protein S14p/S29e PACID_RS12535 PF00281 Ribosomal protein L5 PACID_RS12535 PF00673 ribosomal L5P family C-terminus PACID_RS12540 PF00467 KOW motif PACID_RS12540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PACID_RS12545 PF00238 Ribosomal protein L14p/L23e PACID_RS12550 PF00005 ABC transporter PACID_RS12550 PF17760 UvrA interaction domain PACID_RS12550 PF17755 UvrA DNA-binding domain PACID_RS12555 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS12560 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS12570 PF00356 Bacterial regulatory proteins, lacI family PACID_RS12580 PF00366 Ribosomal protein S17 PACID_RS12585 PF00831 Ribosomal L29 protein PACID_RS12590 PF00252 Ribosomal protein L16p/L10e PACID_RS12595 PF07650 KH domain PACID_RS12595 PF00189 Ribosomal protein S3, C-terminal domain PACID_RS12600 PF00237 Ribosomal protein L22p/L17e PACID_RS12605 PF00203 Ribosomal protein S19 PACID_RS12610 PF00181 Ribosomal Proteins L2, RNA binding domain PACID_RS12610 PF03947 Ribosomal Proteins L2, C-terminal domain PACID_RS12615 PF00276 Ribosomal protein L23 PACID_RS12620 PF00573 Ribosomal protein L4/L1 family PACID_RS12625 PF00297 Ribosomal protein L3 PACID_RS12630 PF00338 Ribosomal protein S10p/S20e PACID_RS12635 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_RS12640 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_RS12640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PACID_RS12655 PF03144 Elongation factor Tu domain 2 PACID_RS12655 PF03143 Elongation factor Tu C-terminal domain PACID_RS12655 PF00009 Elongation factor Tu GTP binding domain PACID_RS12660 PF03144 Elongation factor Tu domain 2 PACID_RS12660 PF14492 Elongation Factor G, domain II PACID_RS12660 PF00679 Elongation factor G C-terminus PACID_RS12660 PF00009 Elongation factor Tu GTP binding domain PACID_RS12660 PF03764 Elongation factor G, domain IV PACID_RS12665 PF00177 Ribosomal protein S7p/S5e PACID_RS12670 PF00164 Ribosomal protein S12/S23 PACID_RS12675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS12690 PF05000 RNA polymerase Rpb1, domain 4 PACID_RS12690 PF04997 RNA polymerase Rpb1, domain 1 PACID_RS12690 PF00623 RNA polymerase Rpb1, domain 2 PACID_RS12690 PF04998 RNA polymerase Rpb1, domain 5 PACID_RS12690 PF04983 RNA polymerase Rpb1, domain 3 PACID_RS12695 PF10385 RNA polymerase beta subunit external 1 domain PACID_RS12695 PF04560 RNA polymerase Rpb2, domain 7 PACID_RS12695 PF00562 RNA polymerase Rpb2, domain 6 PACID_RS12695 PF04565 RNA polymerase Rpb2, domain 3 PACID_RS12695 PF04563 RNA polymerase beta subunit PACID_RS12695 PF04561 RNA polymerase Rpb2, domain 2 PACID_RS12700 PF00542 Ribosomal protein L7/L12 C-terminal domain PACID_RS12700 PF16320 Ribosomal protein L7/L12 dimerisation domain PACID_RS12710 PF00687 Ribosomal protein L1p/L10e family PACID_RS12715 PF00298 Ribosomal protein L11, RNA binding domain PACID_RS12715 PF03946 Ribosomal protein L11, N-terminal domain PACID_RS12720 PF02357 Transcription termination factor nusG PACID_RS12735 PF12897 Alanine-glyoxylate amino-transferase PACID_RS12740 PF01565 FAD binding domain PACID_RS12740 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PACID_RS12750 PF13452 N-terminal half of MaoC dehydratase PACID_RS12755 PF00471 Ribosomal protein L33 PACID_RS12775 PF04461 Protein of unknown function (DUF520) PACID_RS12795 PF00037 4Fe-4S binding domain PACID_RS12800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_RS12800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PACID_RS12805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PACID_RS12810 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PACID_RS12810 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PACID_RS12810 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PACID_RS12815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_RS12820 PF05649 Peptidase family M13 PACID_RS12820 PF01431 Peptidase family M13 PACID_RS12830 PF02653 Branched-chain amino acid transport system / permease component PACID_RS12835 PF02653 Branched-chain amino acid transport system / permease component PACID_RS12840 PF00005 ABC transporter PACID_RS12845 PF13407 Periplasmic binding protein domain PACID_RS12850 PF03328 HpcH/HpaI aldolase/citrate lyase family PACID_RS12855 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PACID_RS12860 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PACID_RS12870 PF00348 Polyprenyl synthetase PACID_RS12875 PF00361 Proton-conducting membrane transporter PACID_RS12880 PF00361 Proton-conducting membrane transporter PACID_RS12885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PACID_RS12885 PF00361 Proton-conducting membrane transporter PACID_RS12890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PACID_RS12895 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PACID_RS12900 PF12838 4Fe-4S dicluster domain PACID_RS12905 PF00146 NADH dehydrogenase PACID_RS12910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PACID_RS12910 PF00384 Molybdopterin oxidoreductase PACID_RS12910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PACID_RS12910 PF01568 Molydopterin dinucleotide binding domain PACID_RS12915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PACID_RS12915 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PACID_RS12915 PF10531 SLBB domain PACID_RS12925 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_RS12930 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PACID_RS12935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PACID_RS12940 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PACID_RS12945 PF01494 FAD binding domain PACID_RS12950 PF00425 chorismate binding enzyme PACID_RS12970 PF00005 ABC transporter PACID_RS12975 PF01209 ubiE/COQ5 methyltransferase family PACID_RS12985 PF00664 ABC transporter transmembrane region PACID_RS12985 PF00005 ABC transporter PACID_RS12995 PF01040 UbiA prenyltransferase family PACID_RS13000 PF07690 Major Facilitator Superfamily PACID_RS13005 PF02733 Dak1 domain PACID_RS13010 PF02734 DAK2 domain PACID_RS13015 PF00391 PEP-utilising enzyme, mobile domain PACID_RS13015 PF03610 PTS system fructose IIA component PACID_RS13015 PF00381 PTS HPr component phosphorylation site PACID_RS13015 PF05524 PEP-utilising enzyme, N-terminal PACID_RS13030 PF10509 Galactokinase galactose-binding signature PACID_RS13030 PF08544 GHMP kinases C terminal PACID_RS13030 PF00288 GHMP kinases N terminal domain PACID_RS13035 PF16916 Dimerisation domain of Zinc Transporter PACID_RS13035 PF01545 Cation efflux family PACID_RS13050 PF13344 Haloacid dehalogenase-like hydrolase PACID_RS13055 PF00296 Luciferase-like monooxygenase PACID_RS13070 PF00288 GHMP kinases N terminal domain PACID_RS13070 PF10509 Galactokinase galactose-binding signature PACID_RS13070 PF08544 GHMP kinases C terminal PACID_RS13080 PF00288 GHMP kinases N terminal domain PACID_RS13080 PF08544 GHMP kinases C terminal PACID_RS13085 PF01070 FMN-dependent dehydrogenase PACID_RS13090 PF00872 Transposase, Mutator family PACID_RS13115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PACID_RS13115 PF00391 PEP-utilising enzyme, mobile domain PACID_RS13130 PF17760 UvrA interaction domain PACID_RS13130 PF17755 UvrA DNA-binding domain PACID_RS13145 PF03033 Glycosyltransferase family 28 N-terminal domain PACID_RS13230 PF00005 ABC transporter PACID_RS13235 PF12399 Branched-chain amino acid ATP-binding cassette transporter PACID_RS13235 PF00005 ABC transporter PACID_RS13240 PF02653 Branched-chain amino acid transport system / permease component PACID_RS13240 PF11862 Domain of unknown function (DUF3382) PACID_RS13245 PF02653 Branched-chain amino acid transport system / permease component PACID_RS13250 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS13255 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS13275 PF02769 AIR synthase related protein, C-terminal domain PACID_RS13275 PF00586 AIR synthase related protein, N-terminal domain PACID_RS13280 PF00156 Phosphoribosyl transferase domain PACID_RS13290 PF07687 Peptidase dimerisation domain PACID_RS13290 PF01546 Peptidase family M20/M25/M40 PACID_RS13310 PF01145 SPFH domain / Band 7 family PACID_RS13315 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PACID_RS13315 PF02769 AIR synthase related protein, C-terminal domain PACID_RS13315 PF00586 AIR synthase related protein, N-terminal domain PACID_RS13330 PF17763 Glutaminase/Asparaginase C-terminal domain PACID_RS13330 PF00710 Asparaginase, N-terminal PACID_RS13335 PF00324 Amino acid permease PACID_RS13340 PF01433 Peptidase family M1 domain PACID_RS13340 PF11838 ERAP1-like C-terminal domain PACID_RS13345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PACID_RS13345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PACID_RS13355 PF01259 SAICAR synthetase PACID_RS13360 PF10417 C-terminal domain of 1-Cys peroxiredoxin PACID_RS13360 PF00578 AhpC/TSA family PACID_RS13365 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS13365 PF13192 Thioredoxin domain PACID_RS13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_RS13370 PF03466 LysR substrate binding domain PACID_RS13375 PF10397 Adenylosuccinate lyase C-terminus PACID_RS13375 PF00206 Lyase PACID_RS13380 PF02844 Phosphoribosylglycinamide synthetase, N domain PACID_RS13380 PF02843 Phosphoribosylglycinamide synthetase, C domain PACID_RS13380 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PACID_RS13385 PF07704 Rv0623-like transcription factor PACID_RS13390 PF01850 PIN domain PACID_RS13395 PF00709 Adenylosuccinate synthetase PACID_RS13410 PF02583 Metal-sensitive transcriptional repressor PACID_RS13415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_RS13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS13430 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PACID_RS13435 PF14492 Elongation Factor G, domain II PACID_RS13435 PF03144 Elongation factor Tu domain 2 PACID_RS13435 PF00679 Elongation factor G C-terminus PACID_RS13435 PF00009 Elongation factor Tu GTP binding domain PACID_RS13445 PF02397 Bacterial sugar transferase PACID_RS13450 PF01571 Aminomethyltransferase folate-binding domain PACID_RS13455 PF08768 Domain of unknown function (DUF1794) PACID_RS13465 PF02580 D-Tyr-tRNA(Tyr) deacylase PACID_RS13495 PF00486 Transcriptional regulatory protein, C terminal PACID_RS13500 PF13090 Polyphosphate kinase C-terminal domain 2 PACID_RS13500 PF02503 Polyphosphate kinase middle domain PACID_RS13500 PF17941 Polyphosphate kinase C-terminal domain 1 PACID_RS13500 PF13089 Polyphosphate kinase N-terminal domain PACID_RS13505 PF00300 Histidine phosphatase superfamily (branch 1) PACID_RS13505 PF00293 NUDIX domain PACID_RS13510 PF12849 PBP superfamily domain PACID_RS13515 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS13520 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS13525 PF00005 ABC transporter PACID_RS13530 PF00830 Ribosomal L28 family PACID_RS13535 PF00872 Transposase, Mutator family PACID_RS13540 PF01783 Ribosomal L32p protein family PACID_RS13545 PF01197 Ribosomal protein L31 PACID_RS13550 PF00471 Ribosomal protein L33 PACID_RS13560 PF07683 Cobalamin synthesis protein cobW C-terminal domain PACID_RS13560 PF02492 CobW/HypB/UreG, nucleotide-binding domain PACID_RS13575 PF00950 ABC 3 transport family PACID_RS13580 PF00005 ABC transporter PACID_RS13590 PF01297 Zinc-uptake complex component A periplasmic PACID_RS13595 PF01497 Periplasmic binding protein PACID_RS13600 PF01032 FecCD transport family PACID_RS13605 PF01032 FecCD transport family PACID_RS13610 PF00005 ABC transporter PACID_RS13615 PF08021 Siderophore-interacting FAD-binding domain PACID_RS13615 PF04954 Siderophore-interacting protein PACID_RS13620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_RS13620 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS13630 PF00920 Dehydratase family PACID_RS13635 PF00291 Pyridoxal-phosphate dependent enzyme PACID_RS13635 PF00585 C-terminal regulatory domain of Threonine dehydratase PACID_RS13640 PF00999 Sodium/hydrogen exchanger family PACID_RS13645 PF03176 MMPL family PACID_RS13650 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PACID_RS13650 PF01266 FAD dependent oxidoreductase PACID_RS13670 PF01578 Cytochrome C assembly protein PACID_RS13680 PF02683 Cytochrome C biogenesis protein transmembrane region PACID_RS13685 PF08534 Redoxin PACID_RS13690 PF00300 Histidine phosphatase superfamily (branch 1) PACID_RS13695 PF10414 Sirohaem synthase dimerisation region PACID_RS13695 PF14824 Sirohaem biosynthesis protein central PACID_RS13695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_RS13700 PF06971 Putative DNA-binding protein N-terminus PACID_RS13700 PF02629 CoA binding domain PACID_RS13710 PF03807 NADP oxidoreductase coenzyme F420-dependent PACID_RS13710 PF14748 Pyrroline-5-carboxylate reductase dimerisation PACID_RS13715 PF02774 Semialdehyde dehydrogenase, dimerisation domain PACID_RS13715 PF01118 Semialdehyde dehydrogenase, NAD binding domain PACID_RS13730 PF01619 Proline dehydrogenase PACID_RS13735 PF01261 Xylose isomerase-like TIM barrel PACID_RS13750 PF06745 KaiC PACID_RS13750 PF18073 Rubredoxin metal binding domain PACID_RS13755 PF02457 DisA bacterial checkpoint controller nucleotide-binding PACID_RS13755 PF10635 DisA bacterial checkpoint controller linker region PACID_RS13765 PF06778 Chlorite dismutase PACID_RS13765 PF00762 Ferrochelatase PACID_RS13770 PF01488 Shikimate / quinate 5-dehydrogenase PACID_RS13770 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PACID_RS13770 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PACID_RS13775 PF01208 Uroporphyrinogen decarboxylase (URO-D) PACID_RS13780 PF01593 Flavin containing amine oxidoreductase PACID_RS13785 PF03900 Porphobilinogen deaminase, C-terminal domain PACID_RS13785 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PACID_RS13795 PF00490 Delta-aminolevulinic acid dehydratase PACID_RS13800 PF00202 Aminotransferase class-III PACID_RS13805 PF10576 Iron-sulfur binding domain of endonuclease III PACID_RS13805 PF00633 Helix-hairpin-helix motif PACID_RS13805 PF00730 HhH-GPD superfamily base excision DNA repair protein PACID_RS13815 PF08402 TOBE domain PACID_RS13815 PF00005 ABC transporter PACID_RS13825 PF01547 Bacterial extracellular solute-binding protein PACID_RS13830 PF00485 Phosphoribulokinase / Uridine kinase family PACID_RS13835 PF01694 Rhomboid family PACID_RS13840 PF08338 Domain of unknown function (DUF1731) PACID_RS13840 PF01370 NAD dependent epimerase/dehydratase family PACID_RS13845 PF07690 Major Facilitator Superfamily PACID_RS13885 PF02558 Ketopantoate reductase PanE/ApbA PACID_RS13885 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_RS13890 PF17871 AAA lid domain PACID_RS13890 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_RS13890 PF07724 AAA domain (Cdc48 subfamily) PACID_RS13890 PF00004 ATPase family associated with various cellular activities (AAA) PACID_RS13890 PF02861 Clp amino terminal domain, pathogenicity island component PACID_RS13900 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_RS13915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PACID_RS13920 PF02152 Dihydroneopterin aldolase PACID_RS13925 PF00809 Pterin binding enzyme PACID_RS13930 PF01227 GTP cyclohydrolase I PACID_RS13935 PF06480 FtsH Extracellular PACID_RS13935 PF01434 Peptidase family M41 PACID_RS13935 PF17862 AAA+ lid domain PACID_RS13935 PF00004 ATPase family associated with various cellular activities (AAA) PACID_RS13940 PF00156 Phosphoribosyl transferase domain PACID_RS13945 PF01171 PP-loop family PACID_RS13950 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PACID_RS13955 PF00719 Inorganic pyrophosphatase PACID_RS13965 PF05448 Acetyl xylan esterase (AXE1) PACID_RS13985 PF00909 Ammonium Transporter Family PACID_RS13990 PF00543 Nitrogen regulatory protein P-II PACID_RS14015 PF01037 Lrp/AsnC ligand binding domain PACID_RS14020 PF02016 LD-carboxypeptidase N-terminal domain PACID_RS14020 PF17676 LD-carboxypeptidase C-terminal domain PACID_RS14025 PF00005 ABC transporter PACID_RS14025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS14030 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS14030 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_RS14035 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS14040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_RS14065 PF03358 NADPH-dependent FMN reductase PACID_RS14070 PF01593 Flavin containing amine oxidoreductase PACID_RS14105 PF00561 alpha/beta hydrolase fold PACID_RS14110 PF04468 PSP1 C-terminal conserved region PACID_RS14120 PF12169 DNA polymerase III subunits gamma and tau domain III PACID_RS14125 PF02223 Thymidylate kinase PACID_RS14135 PF01751 Toprim domain PACID_RS14135 PF13368 Topoisomerase C-terminal repeat PACID_RS14135 PF01131 DNA topoisomerase PACID_RS14145 PF17827 PrmC N-terminal domain PACID_RS14145 PF05175 Methyltransferase small domain PACID_RS14150 PF09369 Domain of unknown function (DUF1998) PACID_RS14150 PF00271 Helicase conserved C-terminal domain PACID_RS14150 PF00270 DEAD/DEAH box helicase PACID_RS14165 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PACID_RS14215 PF00437 Type II/IV secretion system protein PACID_RS14235 PF00293 NUDIX domain PACID_RS14240 PF08534 Redoxin PACID_RS14245 PF10576 Iron-sulfur binding domain of endonuclease III PACID_RS14245 PF00633 Helix-hairpin-helix motif PACID_RS14245 PF00730 HhH-GPD superfamily base excision DNA repair protein PACID_RS14250 PF13545 Crp-like helix-turn-helix domain PACID_RS14250 PF00027 Cyclic nucleotide-binding domain PACID_RS14260 PF02467 Transcription factor WhiB PACID_RS14265 PF00905 Penicillin binding protein transpeptidase domain PACID_RS14265 PF00912 Transglycosylase PACID_RS14270 PF00149 Calcineurin-like phosphoesterase PACID_RS14270 PF10518 TAT (twin-arginine translocation) pathway signal sequence PACID_RS14290 PF00324 Amino acid permease PACID_RS14295 PF02574 Homocysteine S-methyltransferase PACID_RS14300 PF01047 MarR family PACID_RS14330 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS14335 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_RS14335 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS14340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS14340 PF00005 ABC transporter PACID_RS14345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_RS14345 PF00005 ABC transporter PACID_RS14360 PF03883 Peroxide stress protein YaaA PACID_RS14365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PACID_RS14370 PF07859 alpha/beta hydrolase fold PACID_RS14375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS14375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS14395 PF02146 Sir2 family PACID_RS14405 PF01554 MatE PACID_RS14420 PF00561 alpha/beta hydrolase fold PACID_RS14435 PF04226 Transglycosylase associated protein PACID_RS14445 PF13462 Thioredoxin PACID_RS14445 PF06965 Na+/H+ antiporter 1 PACID_RS14455 PF00196 Bacterial regulatory proteins, luxR family PACID_RS14455 PF00072 Response regulator receiver domain PACID_RS14460 PF06628 Catalase-related immune-responsive PACID_RS14460 PF00199 Catalase PACID_RS14460 PF18011 C-terminal domain found in long catalases PACID_RS14480 PF01068 ATP dependent DNA ligase domain PACID_RS14480 PF04679 ATP dependent DNA ligase C terminal region PACID_RS14480 PF13298 DNA polymerase Ligase (LigD) PACID_RS14485 PF00067 Cytochrome P450 PACID_RS14495 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS14495 PF14759 Reductase C-terminal PACID_RS14500 PF00210 Ferritin-like domain PACID_RS14520 PF03631 Virulence factor BrkB PACID_RS14540 PF00141 Peroxidase PACID_RS14545 PF01475 Ferric uptake regulator family PACID_RS14560 PF06150 ChaB PACID_RS14565 PF00248 Aldo/keto reductase family PACID_RS14580 PF02705 K+ potassium transporter PACID_RS14585 PF02702 Osmosensitive K+ channel His kinase sensor domain PACID_RS14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS14585 PF13493 Domain of unknown function (DUF4118) PACID_RS14590 PF00486 Transcriptional regulatory protein, C terminal PACID_RS14590 PF00072 Response regulator receiver domain PACID_RS14605 PF18019 HD domain PACID_RS14605 PF00270 DEAD/DEAH box helicase PACID_RS14605 PF18395 Cas3 C-terminal domain PACID_RS14620 PF09344 CT1975-like protein PACID_RS14625 PF01867 CRISPR associated protein Cas1 PACID_RS14630 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) PACID_RS14635 PF00872 Transposase, Mutator family PACID_RS14655 PF08946 Osmosensory transporter coiled coil PACID_RS14655 PF00083 Sugar (and other) transporter PACID_RS14660 PF01134 Glucose inhibited division protein A PACID_RS14660 PF13932 GidA associated domain PACID_RS14665 PF01614 Bacterial transcriptional regulator PACID_RS14665 PF09339 IclR helix-turn-helix domain PACID_RS14670 PF09335 SNARE associated Golgi protein PACID_RS14680 PF00534 Glycosyl transferases group 1 PACID_RS14680 PF13439 Glycosyltransferase Family 4 PACID_RS14685 PF00989 PAS fold PACID_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS14685 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS14685 PF11808 Phosphate regulon sensor protein PhoR PACID_RS14690 PF00486 Transcriptional regulatory protein, C terminal PACID_RS14690 PF00072 Response regulator receiver domain PACID_RS14695 PF02673 Bacitracin resistance protein BacA PACID_RS14705 PF03649 Uncharacterised protein family (UPF0014) PACID_RS14715 PF00392 Bacterial regulatory proteins, gntR family PACID_RS14715 PF00155 Aminotransferase class I and II PACID_RS14720 PF00106 short chain dehydrogenase PACID_RS14725 PF00202 Aminotransferase class-III PACID_RS14730 PF00872 Transposase, Mutator family PACID_RS14735 PF00106 short chain dehydrogenase PACID_RS14745 PF00571 CBS domain PACID_RS14745 PF01380 SIS domain PACID_RS14750 PF00294 pfkB family carbohydrate kinase PACID_RS14750 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PACID_RS14760 PF01547 Bacterial extracellular solute-binding protein PACID_RS14765 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS14780 PF00356 Bacterial regulatory proteins, lacI family PACID_RS14785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS14785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS14790 PF00107 Zinc-binding dehydrogenase PACID_RS14790 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS14795 PF04198 Putative sugar-binding domain PACID_RS14795 PF13936 Helix-turn-helix domain PACID_RS14800 PF01791 DeoC/LacD family aldolase PACID_RS14805 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS14805 PF00107 Zinc-binding dehydrogenase PACID_RS14820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS14820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS14825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS14825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS14830 PF14552 Tautomerase enzyme PACID_RS14870 PF03591 AzlC protein PACID_RS14885 PF00155 Aminotransferase class I and II PACID_RS14890 PF05872 Bacterial protein of unknown function (DUF853) PACID_RS14905 PF03471 Transporter associated domain PACID_RS14905 PF02080 TrkA-C domain PACID_RS14905 PF00999 Sodium/hydrogen exchanger family PACID_RS14910 PF00005 ABC transporter PACID_RS14910 PF00571 CBS domain PACID_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS14930 PF00144 Beta-lactamase PACID_RS14940 PF00892 EamA-like transporter family PACID_RS14950 PF14765 Polyketide synthase dehydratase PACID_RS14950 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_RS14950 PF00550 Phosphopantetheine attachment site PACID_RS14950 PF08659 KR domain PACID_RS14950 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_RS14950 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS14950 PF16197 Ketoacyl-synthetase C-terminal extension PACID_RS14950 PF00698 Acyl transferase domain PACID_RS14970 PF14437 MafB19-like deaminase PACID_RS14995 PF07690 Major Facilitator Superfamily PACID_RS15000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_RS15000 PF00128 Alpha amylase, catalytic domain PACID_RS15005 PF00107 Zinc-binding dehydrogenase PACID_RS15005 PF16884 N-terminal domain of oxidoreductase PACID_RS15010 PF00326 Prolyl oligopeptidase family PACID_RS15010 PF07676 WD40-like Beta Propeller Repeat PACID_RS15015 PF03009 Glycerophosphoryl diester phosphodiesterase family PACID_RS15040 PF03816 Cell envelope-related transcriptional attenuator domain PACID_RS15045 PF00356 Bacterial regulatory proteins, lacI family PACID_RS15050 PF00288 GHMP kinases N terminal domain PACID_RS15050 PF08544 GHMP kinases C terminal PACID_RS15050 PF10509 Galactokinase galactose-binding signature PACID_RS15080 PF14765 Polyketide synthase dehydratase PACID_RS15080 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_RS15080 PF00698 Acyl transferase domain PACID_RS15080 PF00107 Zinc-binding dehydrogenase PACID_RS15080 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_RS15080 PF16197 Ketoacyl-synthetase C-terminal extension PACID_RS15080 PF00550 Phosphopantetheine attachment site PACID_RS15080 PF08659 KR domain PACID_RS15080 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS15085 PF00764 Arginosuccinate synthase PACID_RS15110 PF00356 Bacterial regulatory proteins, lacI family PACID_RS15125 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15130 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15145 PF02403 Seryl-tRNA synthetase N-terminal domain PACID_RS15145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_RS15155 PF00800 Prephenate dehydratase PACID_RS15155 PF01842 ACT domain PACID_RS15165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PACID_RS15175 PF00842 Alanine racemase, C-terminal domain PACID_RS15175 PF01168 Alanine racemase, N-terminal domain PACID_RS15185 PF02817 e3 binding domain PACID_RS15185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_RS15185 PF00364 Biotin-requiring enzyme PACID_RS15190 PF02779 Transketolase, pyrimidine binding domain PACID_RS15190 PF02780 Transketolase, C-terminal domain PACID_RS15195 PF00676 Dehydrogenase E1 component PACID_RS15200 PF01593 Flavin containing amine oxidoreductase PACID_RS15200 PF01593 Flavin containing amine oxidoreductase PACID_RS15205 PF04055 Radical SAM superfamily PACID_RS15205 PF13186 Iron-sulfur cluster-binding domain PACID_RS15235 PF08946 Osmosensory transporter coiled coil PACID_RS15235 PF00083 Sugar (and other) transporter PACID_RS15240 PF01546 Peptidase family M20/M25/M40 PACID_RS15240 PF07687 Peptidase dimerisation domain PACID_RS15245 PF00155 Aminotransferase class I and II PACID_RS15250 PF00557 Metallopeptidase family M24 PACID_RS15250 PF01321 Creatinase/Prolidase N-terminal domain PACID_RS15255 PF07729 FCD domain PACID_RS15255 PF00392 Bacterial regulatory proteins, gntR family PACID_RS15260 PF00202 Aminotransferase class-III PACID_RS15265 PF00171 Aldehyde dehydrogenase family PACID_RS15290 PF01425 Amidase PACID_RS15295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_RS15295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_RS15310 PF00005 ABC transporter PACID_RS15315 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15320 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15330 PF03633 Glycosyl hydrolase family 65, C-terminal domain PACID_RS15330 PF03632 Glycosyl hydrolase family 65 central catalytic domain PACID_RS15330 PF03636 Glycosyl hydrolase family 65, N-terminal domain PACID_RS15335 PF01022 Bacterial regulatory protein, arsR family PACID_RS15360 PF04945 YHS domain PACID_RS15365 PF14338 Mrr N-terminal domain PACID_RS15365 PF04471 Restriction endonuclease PACID_RS15380 PF00111 2Fe-2S iron-sulfur cluster binding domain PACID_RS15380 PF00175 Oxidoreductase NAD-binding domain PACID_RS15380 PF00970 Oxidoreductase FAD-binding domain PACID_RS15395 PF00672 HAMP domain PACID_RS15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS15395 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS15400 PF00072 Response regulator receiver domain PACID_RS15400 PF00486 Transcriptional regulatory protein, C terminal PACID_RS15410 PF00251 Glycosyl hydrolases family 32 N-terminal domain PACID_RS15410 PF08244 Glycosyl hydrolases family 32 C terminal PACID_RS15415 PF04198 Putative sugar-binding domain PACID_RS15420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS15420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS15425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS15425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS15430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_RS15430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_RS15430 PF01842 ACT domain PACID_RS15435 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_RS15440 PF00248 Aldo/keto reductase family PACID_RS15445 PF01791 DeoC/LacD family aldolase PACID_RS15450 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS15450 PF00107 Zinc-binding dehydrogenase PACID_RS15460 PF00083 Sugar (and other) transporter PACID_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15500 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15505 PF01547 Bacterial extracellular solute-binding protein PACID_RS15515 PF00150 Cellulase (glycosyl hydrolase family 5) PACID_RS15515 PF02839 Carbohydrate binding domain PACID_RS15525 PF00128 Alpha amylase, catalytic domain PACID_RS15550 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_RS15550 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_RS15550 PF14310 Fibronectin type III-like domain PACID_RS15555 PF00128 Alpha amylase, catalytic domain PACID_RS15565 PF13416 Bacterial extracellular solute-binding protein PACID_RS15570 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15575 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15580 PF02308 MgtC family PACID_RS15595 PF00135 Carboxylesterase family PACID_RS15600 PF00480 ROK family PACID_RS15610 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15615 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15620 PF00128 Alpha amylase, catalytic domain PACID_RS15630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_RS15635 PF00005 ABC transporter PACID_RS15635 PF00664 ABC transporter transmembrane region PACID_RS15640 PF00005 ABC transporter PACID_RS15640 PF00664 ABC transporter transmembrane region PACID_RS15655 PF02423 Ornithine cyclodeaminase/mu-crystallin family PACID_RS15665 PF07944 Beta-L-arabinofuranosidase, GH127 PACID_RS15675 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15680 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS15690 PF00356 Bacterial regulatory proteins, lacI family PACID_RS15700 PF00486 Transcriptional regulatory protein, C terminal PACID_RS15700 PF00072 Response regulator receiver domain PACID_RS15705 PF00512 His Kinase A (phospho-acceptor) domain PACID_RS15705 PF00672 HAMP domain PACID_RS15705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS15715 PF00293 NUDIX domain PACID_RS15720 PF02674 Colicin V production protein PACID_RS15725 PF01545 Cation efflux family PACID_RS15725 PF16916 Dimerisation domain of Zinc Transporter PACID_RS15740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PACID_RS15745 PF00689 Cation transporting ATPase, C-terminus PACID_RS15745 PF00690 Cation transporter/ATPase, N-terminus PACID_RS15755 PF02673 Bacitracin resistance protein BacA PACID_RS15760 PF00398 Ribosomal RNA adenine dimethylase PACID_RS15770 PF01281 Ribosomal protein L9, N-terminal domain PACID_RS15770 PF03948 Ribosomal protein L9, C-terminal domain PACID_RS15775 PF01084 Ribosomal protein S18 PACID_RS15780 PF00436 Single-strand binding protein family PACID_RS15785 PF01250 Ribosomal protein S6 PACID_RS15790 PF10518 TAT (twin-arginine translocation) pathway signal sequence PACID_RS15790 PF04261 Dyp-type peroxidase family PACID_RS15795 PF13473 Cupredoxin-like domain PACID_RS15795 PF09375 Imelysin PACID_RS15800 PF03239 Iron permease FTR1 family PACID_RS15810 PF00501 AMP-binding enzyme PACID_RS15820 PF01261 Xylose isomerase-like TIM barrel PACID_RS15825 PF00106 short chain dehydrogenase PACID_RS15860 PF14759 Reductase C-terminal PACID_RS15860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS15865 PF00155 Aminotransferase class I and II PACID_RS15870 PF02913 FAD linked oxidases, C-terminal domain PACID_RS15870 PF01565 FAD binding domain PACID_RS15880 PF00196 Bacterial regulatory proteins, luxR family PACID_RS15880 PF00072 Response regulator receiver domain PACID_RS15885 PF09594 Glycosyltransferase family 87 PACID_RS15890 PF00005 ABC transporter PACID_RS15920 PF12704 MacB-like periplasmic core domain PACID_RS15920 PF02687 FtsX-like permease family PACID_RS15920 PF00005 ABC transporter PACID_RS15925 PF07730 Histidine kinase PACID_RS15925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS15930 PF02754 Cysteine-rich domain PACID_RS15930 PF13183 4Fe-4S dicluster domain PACID_RS15935 PF00890 FAD binding domain PACID_RS15940 PF04324 BFD-like [2Fe-2S] binding domain PACID_RS15940 PF01266 FAD dependent oxidoreductase PACID_RS15945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_RS15945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_RS15950 PF01047 MarR family PACID_RS15960 PF00324 Amino acid permease PACID_RS15970 PF04264 YceI-like domain PACID_RS15995 PF01554 MatE PACID_RS16010 PF00294 pfkB family carbohydrate kinase PACID_RS16020 PF04073 Aminoacyl-tRNA editing domain PACID_RS16030 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS16035 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS16040 PF00356 Bacterial regulatory proteins, lacI family PACID_RS16055 PF02585 GlcNAc-PI de-N-acetylase PACID_RS16065 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS16065 PF00107 Zinc-binding dehydrogenase PACID_RS16075 PF00251 Glycosyl hydrolases family 32 N-terminal domain PACID_RS16075 PF08244 Glycosyl hydrolases family 32 C terminal PACID_RS16080 PF00294 pfkB family carbohydrate kinase PACID_RS16085 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PACID_RS16090 PF01402 Ribbon-helix-helix protein, copG family PACID_RS16095 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PACID_RS16100 PF01850 PIN domain PACID_RS16105 PF02540 NAD synthase PACID_RS16105 PF00795 Carbon-nitrogen hydrolase PACID_RS16110 PF00355 Rieske [2Fe-2S] domain PACID_RS16120 PF01061 ABC-2 type transporter PACID_RS16120 PF00005 ABC transporter PACID_RS16120 PF00498 FHA domain PACID_RS16135 PF00365 Phosphofructokinase PACID_RS16140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PACID_RS16140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PACID_RS16145 PF12146 Serine aminopeptidase, S33 PACID_RS16190 PF03734 L,D-transpeptidase catalytic domain PACID_RS16190 PF17964 Bacterial Ig domain PACID_RS16195 PF03330 Lytic transglycolase PACID_RS16200 PF00285 Citrate synthase, C-terminal domain PACID_RS16205 PF00962 Adenosine/AMP deaminase PACID_RS16220 PF02838 Glycosyl hydrolase family 20, domain 2 PACID_RS16220 PF00728 Glycosyl hydrolase family 20, catalytic domain PACID_RS16250 PF00654 Voltage gated chloride channel PACID_RS16260 PF05167 Uncharacterised ACR (DUF711) PACID_RS16275 PF10415 Fumarase C C-terminus PACID_RS16275 PF00206 Lyase PACID_RS16280 PF01964 Radical SAM ThiC family PACID_RS16280 PF13667 ThiC-associated domain PACID_RS16285 PF05076 Suppressor of fused protein (SUFU) PACID_RS16295 PF03051 Peptidase C1-like family PACID_RS16300 PF00005 ABC transporter PACID_RS16315 PF07690 Major Facilitator Superfamily PACID_RS16325 PF08220 DeoR-like helix-turn-helix domain PACID_RS16325 PF00455 DeoR C terminal sensor domain PACID_RS16330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PACID_RS16330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PACID_RS16345 PF00924 Mechanosensitive ion channel PACID_RS16355 PF02595 Glycerate kinase family PACID_RS16365 PF01743 Poly A polymerase head domain PACID_RS16365 PF12627 Probable RNA and SrmB- binding site of polymerase A PACID_RS16365 PF13735 tRNA nucleotidyltransferase domain 2 putative PACID_RS16370 PF00171 Aldehyde dehydrogenase family PACID_RS16375 PF01758 Sodium Bile acid symporter family PACID_RS16380 PF00107 Zinc-binding dehydrogenase PACID_RS16380 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS16415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_RS16415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_RS16420 PF00230 Major intrinsic protein PACID_RS16425 PF04198 Putative sugar-binding domain PACID_RS16435 PF13180 PDZ domain PACID_RS16450 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS16455 PF00528 Binding-protein-dependent transport system inner membrane component PACID_RS16460 PF13416 Bacterial extracellular solute-binding protein PACID_RS16465 PF06964 Alpha-L-arabinofuranosidase C-terminal domain PACID_RS16470 PF00356 Bacterial regulatory proteins, lacI family PACID_RS16475 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_RS16480 PF01638 HxlR-like helix-turn-helix PACID_RS16490 PF00849 RNA pseudouridylate synthase PACID_RS16495 PF00085 Thioredoxin PACID_RS16510 PF13086 AAA domain PACID_RS16510 PF13087 AAA domain PACID_RS16510 PF13086 AAA domain PACID_RS16510 PF13195 Protein of unknown function (DUF4011) PACID_RS16510 PF13087 AAA domain PACID_RS16510 PF13195 Protein of unknown function (DUF4011) PACID_RS16515 PF07730 Histidine kinase PACID_RS16515 PF13492 GAF domain PACID_RS16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_RS16525 PF00923 Transaldolase/Fructose-6-phosphate aldolase PACID_RS16530 PF08240 Alcohol dehydrogenase GroES-like domain PACID_RS16530 PF00107 Zinc-binding dehydrogenase PACID_RS16535 PF01261 Xylose isomerase-like TIM barrel PACID_RS16540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS16540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS16545 PF00356 Bacterial regulatory proteins, lacI family PACID_RS16550 PF03466 LysR substrate binding domain PACID_RS16550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_RS16555 PF03601 Conserved hypothetical protein 698 PACID_RS16560 PF01261 Xylose isomerase-like TIM barrel PACID_RS16565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS16565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS16575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS16575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS16585 PF00356 Bacterial regulatory proteins, lacI family PACID_RS16590 PF00083 Sugar (and other) transporter PACID_RS16595 PF00356 Bacterial regulatory proteins, lacI family PACID_RS16600 PF01261 Xylose isomerase-like TIM barrel PACID_RS16605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_RS16605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_RS16610 PF01261 Xylose isomerase-like TIM barrel PACID_RS16615 PF00171 Aldehyde dehydrogenase family PACID_RS16630 PF00155 Aminotransferase class I and II PACID_RS16635 PF01820 D-ala D-ala ligase N-terminus PACID_RS16635 PF07478 D-ala D-ala ligase C-terminus PACID_RS16645 PF12823 Domain of unknown function (DUF3817) PACID_RS16655 PF17762 HTH domain found in ParB protein PACID_RS16655 PF02195 ParB-like nuclease domain PACID_RS16660 PF13614 AAA domain PACID_RS16665 PF00872 Transposase, Mutator family PACID_RS16670 PF02527 rRNA small subunit methyltransferase G PACID_RS16675 PF00893 Small Multidrug Resistance protein PACID_RS16685 PF02096 60Kd inner membrane protein PACID_RS16690 PF01809 Putative membrane protein insertion efficiency factor PACID_RS16695 PF00825 Ribonuclease P PACID_RS16710 PF00092 von Willebrand factor type A domain PACID_RS16720 PF00583 Acetyltransferase (GNAT) family PACID_RS16740 PF17866 AAA lid domain PACID_RS16740 PF00004 ATPase family associated with various cellular activities (AAA) PACID_RS16755 PF00561 alpha/beta hydrolase fold PACID_RS16810 PF03965 Penicillinase repressor PACID_RS16830 PF00440 Bacterial regulatory proteins, tetR family PACID_RS16840 PF01451 Low molecular weight phosphotyrosine protein phosphatase PACID_RS16895 PF13419 Haloacid dehalogenase-like hydrolase PACID_RS16905 PF01209 ubiE/COQ5 methyltransferase family PACID_RS16965 PF05257 CHAP domain PACID_RS16965 PF01476 LysM domain PACID_RS17015 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain PACID_RS17015 PF01522 Polysaccharide deacetylase PACID_RS17025 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_RS17075 PF00069 Protein kinase domain PACID_RS17080 PF00440 Bacterial regulatory proteins, tetR family PACID_RS17080 PF17754 MftR C-terminal domain PACID_RS17085 PF00860 Permease family PACID_RS17090 PF00860 Permease family PACID_RS17120 PF05656 Protein of unknown function (DUF805) PACID_RS17150 PF13569 Domain of unknown function (DUF4132) PACID_RS17155 PF01551 Peptidase family M23 PACID_RS17165 PF00436 Single-strand binding protein family PACID_RS17190 PF01551 Peptidase family M23 PACID_RS17190 PF08460 Bacterial SH3 domain PACID_RS17260 PF04545 Sigma-70, region 4 PACID_RS17260 PF00140 Sigma-70 factor, region 1.2 PACID_RS17260 PF04542 Sigma-70 region 2 PACID_RS17260 PF04539 Sigma-70 region 3 PACID_RS17265 PF04607 Region found in RelA / SpoT proteins PACID_RS17265 PF13291 ACT domain PACID_RS17265 PF02824 TGS domain PACID_RS17280 PF01569 PAP2 superfamily PACID_RS17295 PF03330 Lytic transglycolase PACID_RS17335 PF13175 AAA ATPase domain PACID_RS17345 PF00069 Protein kinase domain PACID_RS17360 PF00069 Protein kinase domain PACID_RS17360 PF03793 PASTA domain PACID_RS17410 PF00069 Protein kinase domain PACID_RS17410 PF03793 PASTA domain PACID_RS17435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PACID_RS17440 PF00232 Glycosyl hydrolase family 1 PACID_RS17445 PF01183 Glycosyl hydrolases family 25