locus-tag class description A5904_RS00005 PF11638 DnaA N-terminal domain A5904_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix A5904_RS00005 PF00308 Bacterial dnaA protein A5904_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain A5904_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain A5904_RS00010 PF02767 DNA polymerase III beta subunit, central domain A5904_RS00015 PF02463 RecF/RecN/SMC N terminal domain A5904_RS00020 PF00204 DNA gyrase B A5904_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus A5904_RS00020 PF18053 DNA gyrase B subunit insert domain A5904_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS00020 PF01751 Toprim domain A5904_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS00030 PF03776 Septum formation topological specificity factor MinE A5904_RS00035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A5904_RS00040 PF03775 Septum formation inhibitor MinC, C-terminal domain A5904_RS00040 PF05209 Septum formation inhibitor MinC, N-terminal domain A5904_RS00045 PF00037 4Fe-4S binding domain A5904_RS00045 PF11953 Domain of unknown function (DUF3470) A5904_RS00050 PF01131 DNA topoisomerase A5904_RS00050 PF13368 Topoisomerase C-terminal repeat A5904_RS00050 PF01751 Toprim domain A5904_RS00055 PF04361 Protein of unknown function (DUF494) A5904_RS00060 PF17782 DprA winged helix domain A5904_RS00060 PF02481 DNA recombination-mediator protein A A5904_RS00070 PF01327 Polypeptide deformylase A5904_RS00075 PF00551 Formyl transferase A5904_RS00075 PF02911 Formyl transferase, C-terminal domain A5904_RS00080 PF01189 16S rRNA methyltransferase RsmB/F A5904_RS00080 PF01029 NusB family A5904_RS00085 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS00085 PF00989 PAS fold A5904_RS00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS00085 PF00672 HAMP domain A5904_RS00090 PF00072 Response regulator receiver domain A5904_RS00090 PF02954 Bacterial regulatory protein, Fis family A5904_RS00090 PF00158 Sigma-54 interaction domain A5904_RS00095 PF00994 Probable molybdopterin binding domain A5904_RS00105 PF01134 Glucose inhibited division protein A A5904_RS00105 PF13932 GidA associated domain A5904_RS00110 PF02527 rRNA small subunit methyltransferase G A5904_RS00115 PF13614 AAA domain A5904_RS00120 PF17762 HTH domain found in ParB protein A5904_RS00120 PF02195 ParB-like nuclease domain A5904_RS00130 PF00119 ATP synthase A chain A5904_RS00135 PF00137 ATP synthase subunit C A5904_RS00140 PF00430 ATP synthase B/B' CF(0) A5904_RS00145 PF00213 ATP synthase delta (OSCP) subunit A5904_RS00150 PF02874 ATP synthase alpha/beta family, beta-barrel domain A5904_RS00150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A5904_RS00150 PF00306 ATP synthase alpha/beta chain, C terminal domain A5904_RS00155 PF00231 ATP synthase A5904_RS00160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A5904_RS00160 PF02874 ATP synthase alpha/beta family, beta-barrel domain A5904_RS00165 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A5904_RS00165 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A5904_RS00170 PF12804 MobA-like NTP transferase domain A5904_RS00170 PF14602 Hexapeptide repeat of succinyl-transferase A5904_RS00170 PF00132 Bacterial transferase hexapeptide (six repeats) A5904_RS00175 PF01380 SIS domain A5904_RS00230 PF01610 Transposase A5904_RS00230 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS00230 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS00250 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS00250 PF00072 Response regulator receiver domain A5904_RS00260 PF01556 DnaJ C terminal domain A5904_RS00260 PF00226 DnaJ domain A5904_RS00265 PF13361 UvrD-like helicase C-terminal domain A5904_RS00265 PF00580 UvrD/REP helicase N-terminal domain A5904_RS00275 PF00672 HAMP domain A5904_RS00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS00275 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS00280 PF00486 Transcriptional regulatory protein, C terminal A5904_RS00280 PF00072 Response regulator receiver domain A5904_RS00295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A5904_RS00300 PF00873 AcrB/AcrD/AcrF family A5904_RS00310 PF01741 Large-conductance mechanosensitive channel, MscL A5904_RS00315 PF02646 RmuC family A5904_RS00320 PF02401 LytB protein A5904_RS00330 PF00459 Inositol monophosphatase family A5904_RS00335 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A5904_RS00340 PF00456 Transketolase, thiamine diphosphate binding domain A5904_RS00340 PF02779 Transketolase, pyrimidine binding domain A5904_RS00340 PF02780 Transketolase, C-terminal domain A5904_RS00345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A5904_RS00345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A5904_RS00350 PF00162 Phosphoglycerate kinase A5904_RS00355 PF00224 Pyruvate kinase, barrel domain A5904_RS00355 PF02887 Pyruvate kinase, alpha/beta domain A5904_RS00360 PF01116 Fructose-bisphosphate aldolase class-II A5904_RS00365 PF00834 Ribulose-phosphate 3 epimerase family A5904_RS00370 PF13419 Haloacid dehalogenase-like hydrolase A5904_RS00375 PF00425 chorismate binding enzyme A5904_RS00375 PF04715 Anthranilate synthase component I, N terminal region A5904_RS00380 PF00117 Glutamine amidotransferase class-I A5904_RS00385 PF00591 Glycosyl transferase family, a/b domain A5904_RS00385 PF02885 Glycosyl transferase family, helical bundle domain A5904_RS00390 PF00218 Indole-3-glycerol phosphate synthase A5904_RS00405 PF03232 Ubiquinone biosynthesis protein COQ7 A5904_RS00415 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A5904_RS00420 PF00005 ABC transporter A5904_RS00425 PF01061 ABC-2 type transporter A5904_RS00440 PF02661 Fic/DOC family A5904_RS00450 PF11855 Protein of unknown function (DUF3375) A5904_RS00475 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A5904_RS00485 PF00589 Phage integrase family A5904_RS00495 PF02534 Type IV secretory system Conjugative DNA transfer A5904_RS00500 PF01464 Transglycosylase SLT domain A5904_RS00530 PF00665 Integrase core domain A5904_RS00535 PF01695 IstB-like ATP binding protein A5904_RS00545 PF00483 Nucleotidyl transferase A5904_RS00545 PF01050 Mannose-6-phosphate isomerase A5904_RS00550 PF16363 GDP-mannose 4,6 dehydratase A5904_RS00555 PF16363 GDP-mannose 4,6 dehydratase A5904_RS00560 PF13439 Glycosyltransferase Family 4 A5904_RS00560 PF00534 Glycosyl transferases group 1 A5904_RS00565 PF13439 Glycosyltransferase Family 4 A5904_RS00565 PF00534 Glycosyl transferases group 1 A5904_RS00575 PF16363 GDP-mannose 4,6 dehydratase A5904_RS00580 PF01370 NAD dependent epimerase/dehydratase family A5904_RS00590 PF00005 ABC transporter A5904_RS00595 PF01061 ABC-2 type transporter A5904_RS00605 PF00535 Glycosyl transferase family 2 A5904_RS00620 PF01943 Polysaccharide biosynthesis protein A5904_RS00620 PF14667 Polysaccharide biosynthesis C-terminal domain A5904_RS00625 PF02397 Bacterial sugar transferase A5904_RS00630 PF05524 PEP-utilising enzyme, N-terminal A5904_RS00630 PF00381 PTS HPr component phosphorylation site A5904_RS00630 PF02896 PEP-utilising enzyme, TIM barrel domain A5904_RS00630 PF00391 PEP-utilising enzyme, mobile domain A5904_RS00630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A5904_RS00635 PF02734 DAK2 domain A5904_RS00640 PF02733 Dak1 domain A5904_RS00650 PF03707 Bacterial signalling protein N terminal repeat A5904_RS00650 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS00650 PF00563 EAL domain A5904_RS00660 PF18073 Rubredoxin metal binding domain A5904_RS00665 PF00842 Alanine racemase, C-terminal domain A5904_RS00665 PF01168 Alanine racemase, N-terminal domain A5904_RS00675 PF03796 DnaB-like helicase C terminal domain A5904_RS00675 PF00772 DnaB-like helicase N terminal domain A5904_RS00680 PF03948 Ribosomal protein L9, C-terminal domain A5904_RS00680 PF01281 Ribosomal protein L9, N-terminal domain A5904_RS00690 PF01084 Ribosomal protein S18 A5904_RS00695 PF01250 Ribosomal protein S6 A5904_RS00700 PF00933 Glycosyl hydrolase family 3 N terminal domain A5904_RS00705 PF13520 Amino acid permease A5904_RS00715 PF05958 tRNA (Uracil-5-)-methyltransferase A5904_RS00715 PF01938 TRAM domain A5904_RS00730 PF00291 Pyridoxal-phosphate dependent enzyme A5904_RS00740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A5904_RS00755 PF01625 Peptide methionine sulfoxide reductase A5904_RS00760 PF01641 SelR domain A5904_RS00765 PF00563 EAL domain A5904_RS00765 PF03707 Bacterial signalling protein N terminal repeat A5904_RS00765 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS00770 PF13538 UvrD-like helicase C-terminal domain A5904_RS00775 PF12705 PD-(D/E)XK nuclease superfamily A5904_RS00775 PF00580 UvrD/REP helicase N-terminal domain A5904_RS00775 PF13361 UvrD-like helicase C-terminal domain A5904_RS00780 PF17946 RecC C-terminal domain A5904_RS00790 PF05114 Protein of unknown function (DUF692) A5904_RS00805 PF00158 Sigma-54 interaction domain A5904_RS00805 PF00072 Response regulator receiver domain A5904_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS00815 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS00820 PF01979 Amidohydrolase family A5904_RS00825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A5904_RS00825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A5904_RS00830 PF00156 Phosphoribosyl transferase domain A5904_RS00835 PF03652 Holliday junction resolvase A5904_RS00840 PF02622 Uncharacterized ACR, COG1678 A5904_RS00845 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A5904_RS00845 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A5904_RS00855 PF00285 Citrate synthase, C-terminal domain A5904_RS00860 PF01521 Iron-sulphur cluster biosynthesis A5904_RS00870 PF07664 Ferrous iron transport protein B C terminus A5904_RS00870 PF02421 Ferrous iron transport protein B A5904_RS00870 PF07670 Nucleoside recognition A5904_RS00880 PF06146 Phosphate-starvation-inducible E A5904_RS00885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A5904_RS00885 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS00890 PF02780 Transketolase, C-terminal domain A5904_RS00890 PF02779 Transketolase, pyrimidine binding domain A5904_RS00890 PF00364 Biotin-requiring enzyme A5904_RS00895 PF00676 Dehydrogenase E1 component A5904_RS00905 PF02080 TrkA-C domain A5904_RS00905 PF03600 Citrate transporter A5904_RS00910 PF00486 Transcriptional regulatory protein, C terminal A5904_RS00910 PF00072 Response regulator receiver domain A5904_RS00915 PF02702 Osmosensitive K+ channel His kinase sensor domain A5904_RS00915 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS00915 PF13492 GAF domain A5904_RS00915 PF13493 Domain of unknown function (DUF4118) A5904_RS00925 PF03814 Potassium-transporting ATPase A subunit A5904_RS00935 PF02669 K+-transporting ATPase, c chain A5904_RS00945 PF03441 FAD binding domain of DNA photolyase A5904_RS00945 PF00875 DNA photolyase A5904_RS00955 PF07690 Major Facilitator Superfamily A5904_RS00970 PF04542 Sigma-70 region 2 A5904_RS00970 PF08281 Sigma-70, region 4 A5904_RS00985 PF00009 Elongation factor Tu GTP binding domain A5904_RS00985 PF03144 Elongation factor Tu domain 2 A5904_RS00985 PF00679 Elongation factor G C-terminus A5904_RS00990 PF01209 ubiE/COQ5 methyltransferase family A5904_RS00995 PF04379 ApaG domain A5904_RS01000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A5904_RS01000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A5904_RS01000 PF06827 Zinc finger found in FPG and IleRS A5904_RS01010 PF03951 Glutamine synthetase, beta-Grasp domain A5904_RS01010 PF00120 Glutamine synthetase, catalytic domain A5904_RS01020 PF01975 Survival protein SurE A5904_RS01030 PF04545 Sigma-70, region 4 A5904_RS01030 PF00140 Sigma-70 factor, region 1.2 A5904_RS01030 PF04542 Sigma-70 region 2 A5904_RS01030 PF04539 Sigma-70 region 3 A5904_RS01035 PF04430 Protein of unknown function (DUF498/DUF598) A5904_RS01040 PF00155 Aminotransferase class I and II A5904_RS01045 PF01842 ACT domain A5904_RS01045 PF00742 Homoserine dehydrogenase A5904_RS01045 PF03447 Homoserine dehydrogenase, NAD binding domain A5904_RS01050 PF00291 Pyridoxal-phosphate dependent enzyme A5904_RS01060 PF17768 RecJ OB domain A5904_RS01060 PF02272 DHHA1 domain A5904_RS01060 PF01368 DHH family A5904_RS01070 PF01336 OB-fold nucleic acid binding domain A5904_RS01070 PF00152 tRNA synthetases class II (D, K and N) A5904_RS01075 PF12704 MacB-like periplasmic core domain A5904_RS01075 PF02687 FtsX-like permease family A5904_RS01080 PF00005 ABC transporter A5904_RS01090 PF03772 Competence protein A5904_RS01090 PF00753 Metallo-beta-lactamase superfamily A5904_RS01100 PF02472 Biopolymer transport protein ExbD/TolR A5904_RS01115 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A5904_RS01120 PF03966 Trm112p-like protein A5904_RS01125 PF02348 Cytidylyltransferase A5904_RS01130 PF00719 Inorganic pyrophosphatase A5904_RS01145 PF00294 pfkB family carbohydrate kinase A5904_RS01155 PF00438 S-adenosylmethionine synthetase, N-terminal domain A5904_RS01155 PF02772 S-adenosylmethionine synthetase, central domain A5904_RS01155 PF02773 S-adenosylmethionine synthetase, C-terminal domain A5904_RS01160 PF05221 S-adenosyl-L-homocysteine hydrolase A5904_RS01160 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A5904_RS01165 PF02219 Methylenetetrahydrofolate reductase A5904_RS01170 PF00485 Phosphoribulokinase / Uridine kinase family A5904_RS01175 PF01145 SPFH domain / Band 7 family A5904_RS01185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A5904_RS01185 PF02806 Alpha amylase, C-terminal all-beta domain A5904_RS01185 PF00128 Alpha amylase, catalytic domain A5904_RS01195 PF00083 Sugar (and other) transporter A5904_RS01205 PF00873 AcrB/AcrD/AcrF family A5904_RS01220 PF00902 Sec-independent protein translocase protein (TatC) A5904_RS01225 PF02416 mttA/Hcf106 family A5904_RS01230 PF02416 mttA/Hcf106 family A5904_RS01235 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A5904_RS01235 PF01502 Phosphoribosyl-AMP cyclohydrolase A5904_RS01240 PF00977 Histidine biosynthesis protein A5904_RS01245 PF00977 Histidine biosynthesis protein A5904_RS01250 PF00117 Glutamine amidotransferase class-I A5904_RS01255 PF00475 Imidazoleglycerol-phosphate dehydratase A5904_RS01260 PF00155 Aminotransferase class I and II A5904_RS01265 PF00815 Histidinol dehydrogenase A5904_RS01270 PF01634 ATP phosphoribosyltransferase A5904_RS01275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A5904_RS01280 PF00462 Glutaredoxin A5904_RS01290 PF01061 ABC-2 type transporter A5904_RS01295 PF00639 PPIC-type PPIASE domain A5904_RS01295 PF09312 SurA N-terminal domain A5904_RS01300 PF04453 LPS transport system D A5904_RS01305 PF01636 Phosphotransferase enzyme family A5904_RS01310 PF00483 Nucleotidyl transferase A5904_RS01325 PF01380 SIS domain A5904_RS01325 PF00571 CBS domain A5904_RS01340 PF03968 OstA-like protein A5904_RS01345 PF00005 ABC transporter A5904_RS01350 PF00309 Sigma-54 factor, Activator interacting domain (AID) A5904_RS01350 PF04552 Sigma-54, DNA binding domain A5904_RS01350 PF04963 Sigma-54 factor, core binding domain A5904_RS01355 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A5904_RS01360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A5904_RS01360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A5904_RS01360 PF02378 Phosphotransferase system, EIIC A5904_RS01365 PF07475 HPr Serine kinase C-terminal domain A5904_RS01365 PF02603 HPr Serine kinase N terminus A5904_RS01370 PF03668 P-loop ATPase protein family A5904_RS01385 PF03734 L,D-transpeptidase catalytic domain A5904_RS01385 PF17969 L,D-transpeptidase C-terminal domain A5904_RS01385 PF01476 LysM domain A5904_RS01395 PF10576 Iron-sulfur binding domain of endonuclease III A5904_RS01395 PF00633 Helix-hairpin-helix motif A5904_RS01395 PF00730 HhH-GPD superfamily base excision DNA repair protein A5904_RS01405 PF00534 Glycosyl transferases group 1 A5904_RS01405 PF08323 Starch synthase catalytic domain A5904_RS01415 PF16363 GDP-mannose 4,6 dehydratase A5904_RS01420 PF04321 RmlD substrate binding domain A5904_RS01435 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A5904_RS01440 PF00483 Nucleotidyl transferase A5904_RS01445 PF00483 Nucleotidyl transferase A5904_RS01455 PF00072 Response regulator receiver domain A5904_RS01455 PF00158 Sigma-54 interaction domain A5904_RS01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS01465 PF00672 HAMP domain A5904_RS01465 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS01475 PF02463 RecF/RecN/SMC N terminal domain A5904_RS01480 PF01513 ATP-NAD kinase A5904_RS01485 PF00381 PTS HPr component phosphorylation site A5904_RS01490 PF05524 PEP-utilising enzyme, N-terminal A5904_RS01490 PF02896 PEP-utilising enzyme, TIM barrel domain A5904_RS01490 PF00391 PEP-utilising enzyme, mobile domain A5904_RS01500 PF00730 HhH-GPD superfamily base excision DNA repair protein A5904_RS01500 PF14815 NUDIX domain A5904_RS01500 PF00633 Helix-hairpin-helix motif A5904_RS01505 PF04362 Bacterial Fe(2+) trafficking A5904_RS01530 PF00206 Lyase A5904_RS01530 PF10415 Fumarase C C-terminus A5904_RS01535 PF18152 DAHP synthase ferredoxin-like domain A5904_RS01535 PF00793 DAHP synthetase I family A5904_RS01545 PF01588 Putative tRNA binding domain A5904_RS01545 PF09334 tRNA synthetases class I (M) A5904_RS01550 PF00557 Metallopeptidase family M24 A5904_RS01550 PF05195 Aminopeptidase P, N-terminal domain A5904_RS01560 PF03309 Type III pantothenate kinase A5904_RS01565 PF03099 Biotin/lipoate A/B protein ligase family A5904_RS01565 PF08279 HTH domain A5904_RS01565 PF02237 Biotin protein ligase C terminal domain A5904_RS01570 PF00171 Aldehyde dehydrogenase family A5904_RS01585 PF08264 Anticodon-binding domain of tRNA A5904_RS01585 PF00133 tRNA synthetases class I (I, L, M and V) A5904_RS01585 PF13603 Leucyl-tRNA synthetase, Domain 2 A5904_RS01590 PF01985 CRS1 / YhbY (CRM) domain A5904_RS01595 PF01728 FtsJ-like methyltransferase A5904_RS01610 PF01609 Transposase DDE domain A5904_RS01610 PF05598 Transposase domain (DUF772) A5904_RS01615 PF00589 Phage integrase family A5904_RS01630 PF10544 T5orf172 domain A5904_RS01675 PF00999 Sodium/hydrogen exchanger family A5904_RS01690 PF01118 Semialdehyde dehydrogenase, NAD binding domain A5904_RS01690 PF02774 Semialdehyde dehydrogenase, dimerisation domain A5904_RS01695 PF00380 Ribosomal protein S9/S16 A5904_RS01700 PF00572 Ribosomal protein L13 A5904_RS01710 PF02322 Cytochrome bd terminal oxidase subunit II A5904_RS01715 PF01654 Cytochrome bd terminal oxidase subunit I A5904_RS01720 PF00342 Phosphoglucose isomerase A5904_RS01725 PF07943 Penicillin-binding protein 5, C-terminal domain A5904_RS01725 PF00768 D-alanyl-D-alanine carboxypeptidase A5904_RS01730 PF17092 Penicillin-binding protein OB-like domain A5904_RS01730 PF00912 Transglycosylase A5904_RS01730 PF00905 Penicillin binding protein transpeptidase domain A5904_RS01740 PF00873 AcrB/AcrD/AcrF family A5904_RS01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS01755 PF08521 Two-component sensor kinase N-terminal A5904_RS01755 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS01760 PF00072 Response regulator receiver domain A5904_RS01760 PF00486 Transcriptional regulatory protein, C terminal A5904_RS01770 PF14572 Phosphoribosyl synthetase-associated domain A5904_RS01770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A5904_RS01780 PF00288 GHMP kinases N terminal domain A5904_RS01800 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A5904_RS01800 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A5904_RS01800 PF01488 Shikimate / quinate 5-dehydrogenase A5904_RS01805 PF00472 RF-1 domain A5904_RS01805 PF03462 PCRF domain A5904_RS01810 PF17827 PrmC N-terminal domain A5904_RS01810 PF05175 Methyltransferase small domain A5904_RS01815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A5904_RS01815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A5904_RS01815 PF06827 Zinc finger found in FPG and IleRS A5904_RS01820 PF00350 Dynamin family A5904_RS01825 PF00037 4Fe-4S binding domain A5904_RS01830 PF01467 Cytidylyltransferase-like A5904_RS01835 PF10672 S-adenosylmethionine-dependent methyltransferase A5904_RS01835 PF02926 THUMP domain A5904_RS01835 PF01170 Putative RNA methylase family UPF0020 A5904_RS01840 PF02881 SRP54-type protein, helical bundle domain A5904_RS01840 PF00448 SRP54-type protein, GTPase domain A5904_RS01845 PF00005 ABC transporter A5904_RS01850 PF18075 FtsX extracellular domain A5904_RS01855 PF04542 Sigma-70 region 2 A5904_RS01855 PF00140 Sigma-70 factor, region 1.2 A5904_RS01855 PF04545 Sigma-70, region 4 A5904_RS01865 PF12795 Mechanosensitive ion channel porin domain A5904_RS01865 PF12794 Mechanosensitive ion channel inner membrane domain 1 A5904_RS01865 PF00924 Mechanosensitive ion channel A5904_RS01870 PF00004 ATPase family associated with various cellular activities (AAA) A5904_RS01870 PF07724 AAA domain (Cdc48 subfamily) A5904_RS01875 PF00227 Proteasome subunit A5904_RS01880 PF00589 Phage integrase family A5904_RS01880 PF02899 Phage integrase, N-terminal SAM-like domain A5904_RS01890 PF01678 Diaminopimelate epimerase A5904_RS01900 PF00106 short chain dehydrogenase A5904_RS01925 PF01270 Glycosyl hydrolases family 8 A5904_RS01950 PF03552 Cellulose synthase A5904_RS01950 PF00535 Glycosyl transferase family 2 A5904_RS01950 PF07238 PilZ domain A5904_RS01970 PF03880 DbpA RNA binding domain A5904_RS01970 PF00271 Helicase conserved C-terminal domain A5904_RS01970 PF00270 DEAD/DEAH box helicase A5904_RS01975 PF00313 'Cold-shock' DNA-binding domain A5904_RS01990 PF00665 Integrase core domain A5904_RS01995 PF01695 IstB-like ATP binding protein A5904_RS02010 PF01610 Transposase A5904_RS02010 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02010 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02035 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02035 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02035 PF01610 Transposase A5904_RS02040 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02040 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02040 PF01610 Transposase A5904_RS02050 PF00535 Glycosyl transferase family 2 A5904_RS02055 PF02954 Bacterial regulatory protein, Fis family A5904_RS02055 PF00072 Response regulator receiver domain A5904_RS02055 PF00158 Sigma-54 interaction domain A5904_RS02065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A5904_RS02065 PF18074 Primosomal protein N C-terminal domain A5904_RS02065 PF17764 3′ DNA-binding domain (3′BD) A5904_RS02065 PF00270 DEAD/DEAH box helicase A5904_RS02065 PF00271 Helicase conserved C-terminal domain A5904_RS02070 PF01040 UbiA prenyltransferase family A5904_RS02080 PF01545 Cation efflux family A5904_RS02085 PF00398 Ribosomal RNA adenine dimethylase A5904_RS02090 PF00483 Nucleotidyl transferase A5904_RS02100 PF03065 Glycosyl hydrolase family 57 A5904_RS02100 PF09094 Domain of unknown function (DUF1925) A5904_RS02100 PF09095 Domain of unknown function (DUF1926) A5904_RS02105 PF00480 ROK family A5904_RS02110 PF01177 Asp/Glu/Hydantoin racemase A5904_RS02120 PF04286 Protein of unknown function (DUF445) A5904_RS02125 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A5904_RS02130 PF00919 Uncharacterized protein family UPF0004 A5904_RS02130 PF01938 TRAM domain A5904_RS02130 PF04055 Radical SAM superfamily A5904_RS02135 PF02562 PhoH-like protein A5904_RS02140 PF02130 Uncharacterized protein family UPF0054 A5904_RS02145 PF03471 Transporter associated domain A5904_RS02145 PF00571 CBS domain A5904_RS02150 PF00795 Carbon-nitrogen hydrolase A5904_RS02170 PF01610 Transposase A5904_RS02170 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02170 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02185 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02185 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02185 PF01610 Transposase A5904_RS02200 PF07690 Major Facilitator Superfamily A5904_RS02210 PF00753 Metallo-beta-lactamase superfamily A5904_RS02210 PF00581 Rhodanese-like domain A5904_RS02225 PF01209 ubiE/COQ5 methyltransferase family A5904_RS02245 PF01022 Bacterial regulatory protein, arsR family A5904_RS02270 PF00403 Heavy-metal-associated domain A5904_RS02280 PF00403 Heavy-metal-associated domain A5904_RS02310 PF00873 AcrB/AcrD/AcrF family A5904_RS02320 PF02583 Metal-sensitive transcriptional repressor A5904_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS02380 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS02380 PF00989 PAS fold A5904_RS02385 PF02954 Bacterial regulatory protein, Fis family A5904_RS02385 PF00072 Response regulator receiver domain A5904_RS02385 PF00158 Sigma-54 interaction domain A5904_RS02395 PF03951 Glutamine synthetase, beta-Grasp domain A5904_RS02395 PF00120 Glutamine synthetase, catalytic domain A5904_RS02405 PF00543 Nitrogen regulatory protein P-II A5904_RS02410 PF00909 Ammonium Transporter Family A5904_RS02420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A5904_RS02420 PF00117 Glutamine amidotransferase class-I A5904_RS02425 PF00543 Nitrogen regulatory protein P-II A5904_RS02445 PF00270 DEAD/DEAH box helicase A5904_RS02445 PF00271 Helicase conserved C-terminal domain A5904_RS02475 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02475 PF01610 Transposase A5904_RS02475 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02580 PF17757 UvrB interaction domain A5904_RS02580 PF00271 Helicase conserved C-terminal domain A5904_RS02580 PF04851 Type III restriction enzyme, res subunit A5904_RS02580 PF12344 Ultra-violet resistance protein B A5904_RS02580 PF02151 UvrB/uvrC motif A5904_RS02585 PF06418 CTP synthase N-terminus A5904_RS02585 PF00117 Glutamine amidotransferase class-I A5904_RS02590 PF00793 DAHP synthetase I family A5904_RS02595 PF03952 Enolase, N-terminal domain A5904_RS02595 PF00113 Enolase, C-terminal TIM barrel domain A5904_RS02600 PF04977 Septum formation initiator A5904_RS02610 PF01132 Elongation factor P (EF-P) OB domain A5904_RS02610 PF09285 Elongation factor P, C-terminal A5904_RS02610 PF08207 Elongation factor P (EF-P) KOW-like domain A5904_RS02620 PF08459 UvrC Helix-hairpin-helix N-terminal A5904_RS02620 PF01541 GIY-YIG catalytic domain A5904_RS02620 PF02151 UvrB/uvrC motif A5904_RS02625 PF01066 CDP-alcohol phosphatidyltransferase A5904_RS02640 PF03073 TspO/MBR family A5904_RS02655 PF00872 Transposase, Mutator family A5904_RS02665 PF00535 Glycosyl transferase family 2 A5904_RS02675 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02675 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02675 PF01610 Transposase A5904_RS02680 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02680 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02680 PF01610 Transposase A5904_RS02690 PF01695 IstB-like ATP binding protein A5904_RS02695 PF00665 Integrase core domain A5904_RS02700 PF00872 Transposase, Mutator family A5904_RS02705 PF00665 Integrase core domain A5904_RS02710 PF00665 Integrase core domain A5904_RS02715 PF01695 IstB-like ATP binding protein A5904_RS02720 PF05598 Transposase domain (DUF772) A5904_RS02720 PF01609 Transposase DDE domain A5904_RS02740 PF01844 HNH endonuclease A5904_RS02780 PF02627 Carboxymuconolactone decarboxylase family A5904_RS02805 PF05717 IS66 Orf2 like protein A5904_RS02810 PF13007 Transposase C of IS166 homeodomain A5904_RS02810 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS02810 PF03050 Transposase IS66 family A5904_RS02810 PF13817 IS66 C-terminal element A5904_RS02835 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02835 PF01610 Transposase A5904_RS02835 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02850 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS02850 PF01610 Transposase A5904_RS02850 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS02865 PF02545 Maf-like protein A5904_RS02870 PF00311 Phosphoenolpyruvate carboxylase A5904_RS02875 PF17209 Hfq protein A5904_RS02880 PF16360 GTP-binding GTPase Middle Region A5904_RS02880 PF13167 GTP-binding GTPase N-terminal A5904_RS02880 PF01926 50S ribosome-binding GTPase A5904_RS02885 PF01145 SPFH domain / Band 7 family A5904_RS02885 PF12221 Bacterial membrane protein N terminal A5904_RS02890 PF01145 SPFH domain / Band 7 family A5904_RS02895 PF13393 Histidyl-tRNA synthetase A5904_RS02900 PF00709 Adenylosuccinate synthetase A5904_RS02910 PF01553 Acyltransferase A5904_RS02915 PF01208 Uroporphyrinogen decarboxylase (URO-D) A5904_RS02920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A5904_RS02920 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS02925 PF00310 Glutamine amidotransferases class-II A5904_RS02925 PF01645 Conserved region in glutamate synthase A5904_RS02925 PF01493 GXGXG motif A5904_RS02925 PF04898 Glutamate synthase central domain A5904_RS02930 PF01966 HD domain A5904_RS02930 PF13286 Phosphohydrolase-associated domain A5904_RS02935 PF02511 Thymidylate synthase complementing protein A5904_RS02940 PF01761 3-dehydroquinate synthase A5904_RS02945 PF01202 Shikimate kinase A5904_RS02950 PF07660 Secretin and TonB N terminus short domain A5904_RS02950 PF11741 AMIN domain A5904_RS02950 PF00263 Bacterial type II and III secretion system protein A5904_RS02950 PF03958 Bacterial type II/III secretion system short domain A5904_RS02970 PF11104 Type IV pilus assembly protein PilM; A5904_RS02975 PF14437 MafB19-like deaminase A5904_RS02980 PF01894 Uncharacterised protein family UPF0047 A5904_RS02990 PF01713 Smr domain A5904_RS02990 PF00488 MutS domain V A5904_RS02995 PF00205 Thiamine pyrophosphate enzyme, central domain A5904_RS02995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A5904_RS02995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A5904_RS03000 PF10369 Small subunit of acetolactate synthase A5904_RS03005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A5904_RS03005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A5904_RS03010 PF02666 Phosphatidylserine decarboxylase A5904_RS03015 PF01066 CDP-alcohol phosphatidyltransferase A5904_RS03025 PF13335 Magnesium chelatase, subunit ChlI C-terminal A5904_RS03025 PF01078 Magnesium chelatase, subunit ChlI A5904_RS03030 PF04380 Membrane fusogenic activity A5904_RS03035 PF01494 FAD binding domain A5904_RS03040 PF01494 FAD binding domain A5904_RS03045 PF01026 TatD related DNase A5904_RS03050 PF00899 ThiF family A5904_RS03065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A5904_RS03075 PF01022 Bacterial regulatory protein, arsR family A5904_RS03090 PF00873 AcrB/AcrD/AcrF family A5904_RS03100 PF00581 Rhodanese-like domain A5904_RS03100 PF01206 Sulfurtransferase TusA A5904_RS03105 PF00462 Glutaredoxin A5904_RS03110 PF00085 Thioredoxin A5904_RS03115 PF01520 N-acetylmuramoyl-L-alanine amidase A5904_RS03115 PF11741 AMIN domain A5904_RS03120 PF00795 Carbon-nitrogen hydrolase A5904_RS03130 PF00005 ABC transporter A5904_RS03130 PF06472 ABC transporter transmembrane region 2 A5904_RS03140 PF00437 Type II/IV secretion system protein A5904_RS03140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A5904_RS03150 PF01252 Signal peptidase (SPase) II A5904_RS03155 PF06827 Zinc finger found in FPG and IleRS A5904_RS03155 PF08264 Anticodon-binding domain of tRNA A5904_RS03155 PF00133 tRNA synthetases class I (I, L, M and V) A5904_RS03160 PF01687 Riboflavin kinase A5904_RS03160 PF06574 FAD synthetase A5904_RS03165 PF12849 PBP superfamily domain A5904_RS03170 PF00528 Binding-protein-dependent transport system inner membrane component A5904_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component A5904_RS03185 PF00294 pfkB family carbohydrate kinase A5904_RS03190 PF00534 Glycosyl transferases group 1 A5904_RS03190 PF00862 Sucrose synthase A5904_RS03195 PF00534 Glycosyl transferases group 1 A5904_RS03195 PF00862 Sucrose synthase A5904_RS03200 PF09278 MerR, DNA binding A5904_RS03200 PF00376 MerR family regulatory protein A5904_RS03205 PF00403 Heavy-metal-associated domain A5904_RS03205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A5904_RS03205 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS03210 PF03458 UPF0126 domain A5904_RS03220 PF01726 LexA DNA binding domain A5904_RS03220 PF00717 Peptidase S24-like A5904_RS03235 PF07733 Bacterial DNA polymerase III alpha NTPase domain A5904_RS03235 PF02811 PHP domain A5904_RS03235 PF01336 OB-fold nucleic acid binding domain A5904_RS03235 PF14579 Helix-hairpin-helix motif A5904_RS03235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A5904_RS03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 A5904_RS03240 PF00072 Response regulator receiver domain A5904_RS03240 PF00989 PAS fold A5904_RS03240 PF01627 Hpt domain A5904_RS03240 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS03240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS03260 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS03260 PF13007 Transposase C of IS166 homeodomain A5904_RS03260 PF03050 Transposase IS66 family A5904_RS03260 PF13817 IS66 C-terminal element A5904_RS03265 PF05717 IS66 Orf2 like protein A5904_RS03280 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03280 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03280 PF01610 Transposase A5904_RS03300 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03300 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03300 PF01610 Transposase A5904_RS03305 PF07690 Major Facilitator Superfamily A5904_RS03325 PF00873 AcrB/AcrD/AcrF family A5904_RS03330 PF13533 Biotin-lipoyl like A5904_RS03345 PF00072 Response regulator receiver domain A5904_RS03345 PF00486 Transcriptional regulatory protein, C terminal A5904_RS03350 PF00672 HAMP domain A5904_RS03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS03350 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS03355 PF13360 PQQ-like domain A5904_RS03355 PF13570 PQQ-like domain A5904_RS03355 PF01011 PQQ enzyme repeat A5904_RS03380 PF05598 Transposase domain (DUF772) A5904_RS03380 PF01609 Transposase DDE domain A5904_RS03385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A5904_RS03385 PF13360 PQQ-like domain A5904_RS03395 PF01654 Cytochrome bd terminal oxidase subunit I A5904_RS03400 PF02322 Cytochrome bd terminal oxidase subunit II A5904_RS03410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A5904_RS03410 PF01568 Molydopterin dinucleotide binding domain A5904_RS03410 PF00384 Molybdopterin oxidoreductase A5904_RS03415 PF12800 4Fe-4S binding domain A5904_RS03415 PF13247 4Fe-4S dicluster domain A5904_RS03420 PF04976 DMSO reductase anchor subunit (DmsC) A5904_RS03450 PF06463 Molybdenum Cofactor Synthesis C A5904_RS03450 PF04055 Radical SAM superfamily A5904_RS03470 PF05717 IS66 Orf2 like protein A5904_RS03475 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS03475 PF13817 IS66 C-terminal element A5904_RS03475 PF03050 Transposase IS66 family A5904_RS03475 PF13007 Transposase C of IS166 homeodomain A5904_RS03490 PF01695 IstB-like ATP binding protein A5904_RS03495 PF00665 Integrase core domain A5904_RS03505 PF01610 Transposase A5904_RS03505 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03505 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03520 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03520 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03520 PF01610 Transposase A5904_RS03550 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS03550 PF13007 Transposase C of IS166 homeodomain A5904_RS03550 PF13817 IS66 C-terminal element A5904_RS03550 PF03050 Transposase IS66 family A5904_RS03555 PF05717 IS66 Orf2 like protein A5904_RS03580 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS03580 PF03050 Transposase IS66 family A5904_RS03580 PF13817 IS66 C-terminal element A5904_RS03580 PF13007 Transposase C of IS166 homeodomain A5904_RS03585 PF05717 IS66 Orf2 like protein A5904_RS03595 PF00324 Amino acid permease A5904_RS03600 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03600 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03600 PF01610 Transposase A5904_RS03610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A5904_RS03615 PF00873 AcrB/AcrD/AcrF family A5904_RS03640 PF07690 Major Facilitator Superfamily A5904_RS03645 PF00034 Cytochrome c A5904_RS03660 PF01370 NAD dependent epimerase/dehydratase family A5904_RS03665 PF01370 NAD dependent epimerase/dehydratase family A5904_RS03670 PF00999 Sodium/hydrogen exchanger family A5904_RS03670 PF02254 TrkA-N domain A5904_RS03670 PF02080 TrkA-C domain A5904_RS03675 PF01557 Fumarylacetoacetate (FAA) hydrolase family A5904_RS03680 PF00384 Molybdopterin oxidoreductase A5904_RS03685 PF02634 FdhD/NarQ family A5904_RS03690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A5904_RS03690 PF17944 Arginine decarboxylase C-terminal helical extension A5904_RS03690 PF17810 Arginine decarboxylase helical bundle domain A5904_RS03695 PF02562 PhoH-like protein A5904_RS03695 PF13638 PIN domain A5904_RS03700 PF00578 AhpC/TSA family A5904_RS03715 PF13419 Haloacid dehalogenase-like hydrolase A5904_RS03720 PF01258 Prokaryotic dksA/traR C4-type zinc finger A5904_RS03740 PF01610 Transposase A5904_RS03740 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03740 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03750 PF08406 CbbQ/NirQ/NorQ C-terminal A5904_RS03750 PF07728 AAA domain (dynein-related subfamily) A5904_RS03755 PF00092 von Willebrand factor type A domain A5904_RS03765 PF00361 Proton-conducting membrane transporter A5904_RS03770 PF01610 Transposase A5904_RS03770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03770 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03790 PF01610 Transposase A5904_RS03790 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS03790 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS03800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A5904_RS03800 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A5904_RS03800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A5904_RS03805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A5904_RS03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS03810 PF03466 LysR substrate binding domain A5904_RS03820 PF00282 Pyridoxal-dependent decarboxylase conserved domain A5904_RS03825 PF02441 Flavoprotein A5904_RS03830 PF08245 Mur ligase middle domain A5904_RS03830 PF02875 Mur ligase family, glutamate ligase domain A5904_RS03830 PF01225 Mur ligase family, catalytic domain A5904_RS03840 PF05690 Thiazole biosynthesis protein ThiG A5904_RS03865 PF02272 DHHA1 domain A5904_RS03865 PF01411 tRNA synthetases class II (A) A5904_RS03865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A5904_RS03870 PF02631 RecX family A5904_RS03875 PF00154 recA bacterial DNA recombination protein A5904_RS03880 PF02464 Competence-damaged protein A5904_RS03880 PF00994 Probable molybdopterin binding domain A5904_RS03885 PF02769 AIR synthase related protein, C-terminal domain A5904_RS03885 PF00586 AIR synthase related protein, N-terminal domain A5904_RS03890 PF00749 tRNA synthetases class I (E and Q), catalytic domain A5904_RS03905 PF17746 SfsA N-terminal OB domain A5904_RS03905 PF03749 Sugar fermentation stimulation protein RE domain A5904_RS03910 PF00557 Metallopeptidase family M24 A5904_RS03915 PF01842 ACT domain A5904_RS03915 PF01909 Nucleotidyltransferase domain A5904_RS03915 PF08335 GlnD PII-uridylyltransferase A5904_RS03915 PF01966 HD domain A5904_RS03920 PF04356 Protein of unknown function (DUF489) A5904_RS03930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A5904_RS03930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A5904_RS03935 PF12826 Helix-hairpin-helix motif A5904_RS03935 PF03120 NAD-dependent DNA ligase OB-fold domain A5904_RS03935 PF01653 NAD-dependent DNA ligase adenylation domain A5904_RS03935 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A5904_RS03935 PF00533 BRCA1 C Terminus (BRCT) domain A5904_RS03945 PF06470 SMC proteins Flexible Hinge Domain A5904_RS03945 PF02463 RecF/RecN/SMC N terminal domain A5904_RS03950 PF14489 QueF-like protein A5904_RS03955 PF01266 FAD dependent oxidoreductase A5904_RS03965 PF01479 S4 domain A5904_RS03965 PF00849 RNA pseudouridylate synthase A5904_RS03970 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS03975 PF04079 Segregation and condensation complex subunit ScpB A5904_RS03980 PF02616 Segregation and condensation protein ScpA A5904_RS03985 PF00579 tRNA synthetases class I (W and Y) A5904_RS03990 PF02163 Peptidase family M50 A5904_RS03995 PF01300 Telomere recombination A5904_RS04000 PF06508 Queuosine biosynthesis protein QueC A5904_RS04010 PF12794 Mechanosensitive ion channel inner membrane domain 1 A5904_RS04010 PF12795 Mechanosensitive ion channel porin domain A5904_RS04010 PF00924 Mechanosensitive ion channel A5904_RS04015 PF00696 Amino acid kinase family A5904_RS04015 PF01472 PUA domain A5904_RS04025 PF01610 Transposase A5904_RS04025 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS04025 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS04035 PF00563 EAL domain A5904_RS04035 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS04035 PF13185 GAF domain A5904_RS04040 PF00691 OmpA family A5904_RS04040 PF13677 Membrane MotB of proton-channel complex MotA/MotB A5904_RS04045 PF01610 Transposase A5904_RS04045 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS04045 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS04065 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS04070 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS04075 PF13091 PLD-like domain A5904_RS04080 PF01381 Helix-turn-helix A5904_RS04085 PF05973 Phage derived protein Gp49-like (DUF891) A5904_RS04105 PF02308 MgtC family A5904_RS04110 PF01566 Natural resistance-associated macrophage protein A5904_RS04145 PF01515 Phosphate acetyl/butaryl transferase A5904_RS04150 PF00294 pfkB family carbohydrate kinase A5904_RS04155 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS04155 PF18113 Rubredoxin binding C-terminal domain A5904_RS04165 PF00391 PEP-utilising enzyme, mobile domain A5904_RS04165 PF00224 Pyruvate kinase, barrel domain A5904_RS04165 PF02887 Pyruvate kinase, alpha/beta domain A5904_RS04170 PF00343 Carbohydrate phosphorylase A5904_RS04170 PF11897 Protein of unknown function (DUF3417) A5904_RS04175 PF16177 Acetyl-coenzyme A synthetase N-terminus A5904_RS04175 PF00501 AMP-binding enzyme A5904_RS04175 PF13193 AMP-binding enzyme C-terminal domain A5904_RS04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS04180 PF03466 LysR substrate binding domain A5904_RS04185 PF07690 Major Facilitator Superfamily A5904_RS04190 PF00654 Voltage gated chloride channel A5904_RS04195 PF00654 Voltage gated chloride channel A5904_RS04200 PF07690 Major Facilitator Superfamily A5904_RS04205 PF04343 Protein of unknown function, DUF488 A5904_RS04220 PF00970 Oxidoreductase FAD-binding domain A5904_RS04220 PF00111 2Fe-2S iron-sulfur cluster binding domain A5904_RS04220 PF00175 Oxidoreductase NAD-binding domain A5904_RS04225 PF00175 Oxidoreductase NAD-binding domain A5904_RS04225 PF00970 Oxidoreductase FAD-binding domain A5904_RS04225 PF00042 Globin A5904_RS04230 PF00027 Cyclic nucleotide-binding domain A5904_RS04230 PF13545 Crp-like helix-turn-helix domain A5904_RS04235 PF02540 NAD synthase A5904_RS04235 PF00958 GMP synthase C terminal domain A5904_RS04235 PF00117 Glutamine amidotransferase class-I A5904_RS04240 PF00571 CBS domain A5904_RS04240 PF00478 IMP dehydrogenase / GMP reductase domain A5904_RS04245 PF01743 Poly A polymerase head domain A5904_RS04245 PF12627 Probable RNA and SrmB- binding site of polymerase A A5904_RS04245 PF12626 Polymerase A arginine-rich C-terminus A5904_RS04250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A5904_RS04255 PF01712 Deoxynucleoside kinase A5904_RS04260 PF02548 Ketopantoate hydroxymethyltransferase A5904_RS04265 PF02569 Pantoate-beta-alanine ligase A5904_RS04270 PF01565 FAD binding domain A5904_RS04270 PF02913 FAD linked oxidases, C-terminal domain A5904_RS04275 PF00488 MutS domain V A5904_RS04275 PF01713 Smr domain A5904_RS04290 PF01027 Inhibitor of apoptosis-promoting Bax1 A5904_RS04295 PF01624 MutS domain I A5904_RS04295 PF05188 MutS domain II A5904_RS04295 PF05192 MutS domain III A5904_RS04295 PF05190 MutS family domain IV A5904_RS04295 PF00488 MutS domain V A5904_RS04300 PF01618 MotA/TolQ/ExbB proton channel family A5904_RS04305 PF04539 Sigma-70 region 3 A5904_RS04305 PF04542 Sigma-70 region 2 A5904_RS04305 PF04545 Sigma-70, region 4 A5904_RS04310 PF10609 NUBPL iron-transfer P-loop NTPase A5904_RS04315 PF00448 SRP54-type protein, GTPase domain A5904_RS04320 PF00771 FHIPEP family A5904_RS04325 PF01312 FlhB HrpN YscU SpaS Family A5904_RS04330 PF01311 Bacterial export proteins, family 1 A5904_RS04335 PF01313 Bacterial export proteins, family 3 A5904_RS04340 PF00813 FliP family A5904_RS04345 PF04347 Flagellar biosynthesis protein, FliO A5904_RS04350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A5904_RS04355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A5904_RS04355 PF02154 Flagellar motor switch protein FliM A5904_RS04370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A5904_RS04370 PF18269 T3SS EscN ATPase C-terminal domain A5904_RS04380 PF01706 FliG C-terminal domain A5904_RS04380 PF14841 FliG middle domain A5904_RS04380 PF14842 FliG N-terminal domain A5904_RS04385 PF01514 Secretory protein of YscJ/FliF family A5904_RS04385 PF08345 Flagellar M-ring protein C-terminal A5904_RS04390 PF02049 Flagellar hook-basal body complex protein FliE A5904_RS04395 PF00158 Sigma-54 interaction domain A5904_RS04395 PF00072 Response regulator receiver domain A5904_RS04395 PF02954 Bacterial regulatory protein, Fis family A5904_RS04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS04400 PF00989 PAS fold A5904_RS04400 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS04405 PF06490 Flagellar regulatory protein FleQ A5904_RS04405 PF02954 Bacterial regulatory protein, Fis family A5904_RS04405 PF00158 Sigma-54 interaction domain A5904_RS04415 PF02561 Flagellar protein FliS A5904_RS04430 PF00669 Bacterial flagellin N-terminal helical region A5904_RS04430 PF00700 Bacterial flagellin C-terminal helical region A5904_RS04435 PF00535 Glycosyl transferase family 2 A5904_RS04440 PF00669 Bacterial flagellin N-terminal helical region A5904_RS04445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A5904_RS04445 PF00460 Flagella basal body rod protein A5904_RS04455 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A5904_RS04455 PF10135 Rod binding protein A5904_RS04460 PF02119 Flagellar P-ring protein A5904_RS04465 PF02107 Flagellar L-ring protein A5904_RS04470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A5904_RS04470 PF00460 Flagella basal body rod protein A5904_RS04475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A5904_RS04475 PF00460 Flagella basal body rod protein A5904_RS04480 PF07559 Flagellar basal body protein FlaE A5904_RS04480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A5904_RS04480 PF00460 Flagella basal body rod protein A5904_RS04485 PF13860 FlgD Ig-like domain A5904_RS04485 PF13861 FlgD Tudor-like domain A5904_RS04485 PF03963 Flagellar hook capping protein - N-terminal region A5904_RS04490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A5904_RS04490 PF00460 Flagella basal body rod protein A5904_RS04495 PF00460 Flagella basal body rod protein A5904_RS04500 PF13144 Chaperone for flagella basal body P-ring formation A5904_RS04500 PF17656 FlgA N-terminal domain A5904_RS04515 PF02599 Global regulator protein family A5904_RS04520 PF02623 FliW protein A5904_RS04530 PF00691 OmpA family A5904_RS04530 PF13677 Membrane MotB of proton-channel complex MotA/MotB A5904_RS04540 PF00072 Response regulator receiver domain A5904_RS04550 PF01584 CheW-like domain A5904_RS04550 PF00072 Response regulator receiver domain A5904_RS04550 PF02895 Signal transducing histidine kinase, homodimeric domain A5904_RS04550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS04550 PF01627 Hpt domain A5904_RS04565 PF00072 Response regulator receiver domain A5904_RS04565 PF01584 CheW-like domain A5904_RS04570 PF00672 HAMP domain A5904_RS04570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A5904_RS04570 PF02743 Cache domain A5904_RS04585 PF00248 Aldo/keto reductase family A5904_RS04590 PF01343 Peptidase family S49 A5904_RS04600 PF00723 Glycosyl hydrolases family 15 A5904_RS04600 PF09137 Glucodextranase, domain N A5904_RS04610 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS04625 PF05717 IS66 Orf2 like protein A5904_RS04630 PF13007 Transposase C of IS166 homeodomain A5904_RS04630 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS04630 PF03050 Transposase IS66 family A5904_RS04630 PF13817 IS66 C-terminal element A5904_RS04645 PF01610 Transposase A5904_RS04645 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS04645 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS04650 PF00005 ABC transporter A5904_RS04655 PF00528 Binding-protein-dependent transport system inner membrane component A5904_RS04660 PF13419 Haloacid dehalogenase-like hydrolase A5904_RS04665 PF01479 S4 domain A5904_RS04665 PF00849 RNA pseudouridylate synthase A5904_RS04670 PF00575 S1 RNA binding domain A5904_RS04670 PF10150 Ribonuclease E/G family A5904_RS04670 PF12111 Polyribonucleotide phosphorylase C terminal A5904_RS04675 PF01406 tRNA synthetases class I (C) catalytic domain A5904_RS04675 PF09190 DALR domain A5904_RS04680 PF00749 tRNA synthetases class I (E and Q), catalytic domain A5904_RS04685 PF17092 Penicillin-binding protein OB-like domain A5904_RS04685 PF00912 Transglycosylase A5904_RS04685 PF00905 Penicillin binding protein transpeptidase domain A5904_RS04690 PF08534 Redoxin A5904_RS04720 PF07963 Prokaryotic N-terminal methylation motif A5904_RS04720 PF00114 Pilin (bacterial filament) A5904_RS04725 PF00482 Type II secretion system (T2SS), protein F A5904_RS04735 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS04745 PF00114 Pilin (bacterial filament) A5904_RS04745 PF07963 Prokaryotic N-terminal methylation motif A5904_RS04750 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS04750 PF01610 Transposase A5904_RS04750 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS04755 PF07963 Prokaryotic N-terminal methylation motif A5904_RS04755 PF00114 Pilin (bacterial filament) A5904_RS04765 PF05231 MASE1 A5904_RS04765 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS04765 PF08448 PAS fold A5904_RS04765 PF13426 PAS domain A5904_RS04765 PF00563 EAL domain A5904_RS04765 PF08447 PAS fold A5904_RS04795 PF13145 PPIC-type PPIASE domain A5904_RS04810 PF00216 Bacterial DNA-binding protein A5904_RS04815 PF00004 ATPase family associated with various cellular activities (AAA) A5904_RS04815 PF05362 Lon protease (S16) C-terminal proteolytic domain A5904_RS04815 PF02190 ATP-dependent protease La (LON) substrate-binding domain A5904_RS04820 PF07724 AAA domain (Cdc48 subfamily) A5904_RS04820 PF10431 C-terminal, D2-small domain, of ClpB protein A5904_RS04820 PF06689 ClpX C4-type zinc finger A5904_RS04825 PF00574 Clp protease A5904_RS04830 PF05697 Bacterial trigger factor protein (TF) A5904_RS04830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A5904_RS04830 PF05698 Bacterial trigger factor protein (TF) C-terminus A5904_RS04835 PF00156 Phosphoribosyl transferase domain A5904_RS04840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A5904_RS04845 PF18073 Rubredoxin metal binding domain A5904_RS04850 PF00216 Bacterial DNA-binding protein A5904_RS04855 PF00575 S1 RNA binding domain A5904_RS04860 PF02224 Cytidylate kinase A5904_RS04865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A5904_RS04870 PF02153 Prephenate dehydrogenase A5904_RS04870 PF01842 ACT domain A5904_RS04875 PF18152 DAHP synthase ferredoxin-like domain A5904_RS04875 PF00793 DAHP synthetase I family A5904_RS04880 PF00155 Aminotransferase class I and II A5904_RS04885 PF01817 Chorismate mutase type II A5904_RS04885 PF01842 ACT domain A5904_RS04885 PF00800 Prephenate dehydratase A5904_RS04890 PF00266 Aminotransferase class-V A5904_RS04895 PF00521 DNA gyrase/topoisomerase IV, subunit A A5904_RS04895 PF03989 DNA gyrase C-terminal domain, beta-propeller A5904_RS04905 PF01008 Initiation factor 2 subunit family A5904_RS04910 PF10672 S-adenosylmethionine-dependent methyltransferase A5904_RS04910 PF17785 PUA-like domain A5904_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component A5904_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component A5904_RS04925 PF12849 PBP superfamily domain A5904_RS04960 PF01926 50S ribosome-binding GTPase A5904_RS04960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A5904_RS04965 PF13360 PQQ-like domain A5904_RS04965 PF01011 PQQ enzyme repeat A5904_RS04975 PF13393 Histidyl-tRNA synthetase A5904_RS04975 PF03129 Anticodon binding domain A5904_RS04980 PF04551 GcpE protein A5904_RS04995 PF04055 Radical SAM superfamily A5904_RS05000 PF00334 Nucleoside diphosphate kinase A5904_RS05005 PF07731 Multicopper oxidase A5904_RS05005 PF00394 Multicopper oxidase A5904_RS05005 PF07732 Multicopper oxidase A5904_RS05005 PF10518 TAT (twin-arginine translocation) pathway signal sequence A5904_RS05015 PF00529 HlyD membrane-fusion protein of T1SS A5904_RS05015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A5904_RS05020 PF02321 Outer membrane efflux protein A5904_RS05035 PF08402 TOBE domain A5904_RS05035 PF00005 ABC transporter A5904_RS05060 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS05060 PF01610 Transposase A5904_RS05060 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS05070 PF02472 Biopolymer transport protein ExbD/TolR A5904_RS05075 PF01618 MotA/TolQ/ExbB proton channel family A5904_RS05080 PF00486 Transcriptional regulatory protein, C terminal A5904_RS05080 PF00072 Response regulator receiver domain A5904_RS05090 PF00534 Glycosyl transferases group 1 A5904_RS05090 PF13439 Glycosyltransferase Family 4 A5904_RS05095 PF00083 Sugar (and other) transporter A5904_RS05110 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS05110 PF01610 Transposase A5904_RS05110 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS05125 PF03976 Polyphosphate kinase 2 (PPK2) A5904_RS05135 PF05726 Pirin C-terminal cupin domain A5904_RS05135 PF02678 Pirin A5904_RS05145 PF01476 LysM domain A5904_RS05145 PF00877 NlpC/P60 family A5904_RS05155 PF01979 Amidohydrolase family A5904_RS05165 PF13419 Haloacid dehalogenase-like hydrolase A5904_RS05175 PF00155 Aminotransferase class I and II A5904_RS05180 PF00132 Bacterial transferase hexapeptide (six repeats) A5904_RS05180 PF14602 Hexapeptide repeat of succinyl-transferase A5904_RS05180 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A5904_RS05185 PF01546 Peptidase family M20/M25/M40 A5904_RS05185 PF07687 Peptidase dimerisation domain A5904_RS05190 PF05036 Sporulation related domain A5904_RS05190 PF03330 Lytic transglycolase A5904_RS05200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A5904_RS05200 PF02896 PEP-utilising enzyme, TIM barrel domain A5904_RS05200 PF00391 PEP-utilising enzyme, mobile domain A5904_RS05205 PF01676 Metalloenzyme superfamily A5904_RS05205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A5904_RS05215 PF00676 Dehydrogenase E1 component A5904_RS05220 PF02779 Transketolase, pyrimidine binding domain A5904_RS05220 PF02780 Transketolase, C-terminal domain A5904_RS05225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A5904_RS05225 PF00364 Biotin-requiring enzyme A5904_RS05225 PF02817 e3 binding domain A5904_RS05230 PF00871 Acetokinase family A5904_RS05235 PF00905 Penicillin binding protein transpeptidase domain A5904_RS05235 PF00912 Transglycosylase A5904_RS05235 PF06832 Penicillin-Binding Protein C-terminus Family A5904_RS05240 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain A5904_RS05240 PF01835 MG2 domain A5904_RS05240 PF17962 Bacterial macroglobulin domain 6 A5904_RS05240 PF11974 Bacterial alpha-2-macroglobulin MG3 domain A5904_RS05240 PF07703 Alpha-2-macroglobulin bait region domain A5904_RS05240 PF00207 Alpha-2-macroglobulin family A5904_RS05240 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain A5904_RS05250 PF00561 alpha/beta hydrolase fold A5904_RS05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS05255 PF03459 TOBE domain A5904_RS05260 PF00291 Pyridoxal-phosphate dependent enzyme A5904_RS05260 PF00585 C-terminal regulatory domain of Threonine dehydratase A5904_RS05270 PF00474 Sodium:solute symporter family A5904_RS05275 PF11755 Protein of unknown function (DUF3311) A5904_RS05280 PF01906 Putative heavy-metal-binding A5904_RS05310 PF08676 MutL C terminal dimerisation domain A5904_RS05310 PF01119 DNA mismatch repair protein, C-terminal domain A5904_RS05315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A5904_RS05320 PF03448 MgtE intracellular N domain A5904_RS05320 PF01769 Divalent cation transporter A5904_RS05320 PF00571 CBS domain A5904_RS05325 PF00202 Aminotransferase class-III A5904_RS05330 PF01256 Carbohydrate kinase A5904_RS05330 PF03853 YjeF-related protein N-terminus A5904_RS05335 PF00909 Ammonium Transporter Family A5904_RS05340 PF13662 Toprim domain A5904_RS05340 PF02132 RecR protein A5904_RS05345 PF02575 YbaB/EbfC DNA-binding family A5904_RS05350 PF12169 DNA polymerase III subunits gamma and tau domain III A5904_RS05350 PF12170 DNA polymerase III tau subunit V interacting with alpha A5904_RS05350 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A5904_RS05365 PF17243 POTRA domain TamA domain 1 A5904_RS05365 PF07244 Surface antigen variable number repeat A5904_RS05365 PF01103 Surface antigen A5904_RS05375 PF01266 FAD dependent oxidoreductase A5904_RS05385 PF01475 Ferric uptake regulator family A5904_RS05395 PF00589 Phage integrase family A5904_RS05450 PF01610 Transposase A5904_RS05450 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS05450 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS05550 PF01464 Transglycosylase SLT domain A5904_RS05555 PF00216 Bacterial DNA-binding protein A5904_RS05610 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS05610 PF01610 Transposase A5904_RS05610 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS05650 PF01555 DNA methylase A5904_RS05655 PF01555 DNA methylase A5904_RS05675 PF01757 Acyltransferase family A5904_RS05710 PF01695 IstB-like ATP binding protein A5904_RS05715 PF00665 Integrase core domain A5904_RS05770 PF02534 Type IV secretory system Conjugative DNA transfer A5904_RS05775 PF10548 P22AR C-terminal domain A5904_RS05775 PF08346 AntA/AntB antirepressor A5904_RS05795 PF17762 HTH domain found in ParB protein A5904_RS05795 PF02195 ParB-like nuclease domain A5904_RS05800 PF13614 AAA domain A5904_RS05810 PF03743 Bacterial conjugation TrbI-like protein A5904_RS05820 PF04335 VirB8 protein A5904_RS05870 PF02384 N-6 DNA Methylase A5904_RS05870 PF12161 HsdM N-terminal domain A5904_RS05890 PF01610 Transposase A5904_RS05890 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS05890 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS05940 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system A5904_RS05950 PF03135 CagE, TrbE, VirB family, component of type IV transporter system A5904_RS05970 PF01610 Transposase A5904_RS05970 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS05970 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06015 PF00437 Type II/IV secretion system protein A5904_RS06035 PF14718 Soluble lytic murein transglycosylase L domain A5904_RS06035 PF01464 Transglycosylase SLT domain A5904_RS06045 PF00437 Type II/IV secretion system protein A5904_RS06070 PF01610 Transposase A5904_RS06070 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06070 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06095 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06095 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06095 PF01610 Transposase A5904_RS06115 PF00436 Single-strand binding protein family A5904_RS06130 PF13091 PLD-like domain A5904_RS06135 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06135 PF01610 Transposase A5904_RS06135 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06145 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) A5904_RS06145 PF08463 EcoEI R protein C-terminal A5904_RS06145 PF04851 Type III restriction enzyme, res subunit A5904_RS06145 PF00271 Helicase conserved C-terminal domain A5904_RS06175 PF01695 IstB-like ATP binding protein A5904_RS06180 PF00665 Integrase core domain A5904_RS06185 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06185 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06185 PF01610 Transposase A5904_RS06210 PF01610 Transposase A5904_RS06210 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06210 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06215 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06215 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06215 PF01610 Transposase A5904_RS06225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A5904_RS06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS06270 PF03466 LysR substrate binding domain A5904_RS06275 PF00361 Proton-conducting membrane transporter A5904_RS06275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A5904_RS06280 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) A5904_RS06295 PF00920 Dehydratase family A5904_RS06300 PF03481 Putative GTP-binding controlling metal-binding A5904_RS06300 PF01300 Telomere recombination A5904_RS06305 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06305 PF01610 Transposase A5904_RS06305 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06315 PF12161 HsdM N-terminal domain A5904_RS06315 PF02384 N-6 DNA Methylase A5904_RS06325 PF05598 Transposase domain (DUF772) A5904_RS06325 PF01609 Transposase DDE domain A5904_RS06335 PF00005 ABC transporter A5904_RS06340 PF07690 Major Facilitator Superfamily A5904_RS06350 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06350 PF01610 Transposase A5904_RS06350 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06360 PF18267 Rubredoxin NAD+ reductase C-terminal domain A5904_RS06360 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS06360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A5904_RS06360 PF04324 BFD-like [2Fe-2S] binding domain A5904_RS06360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A5904_RS06365 PF00355 Rieske [2Fe-2S] domain A5904_RS06370 PF00384 Molybdopterin oxidoreductase A5904_RS06370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A5904_RS06370 PF01568 Molydopterin dinucleotide binding domain A5904_RS06375 PF02885 Glycosyl transferase family, helical bundle domain A5904_RS06380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A5904_RS06380 PF10414 Sirohaem synthase dimerisation region A5904_RS06390 PF08376 Nitrate and nitrite sensing A5904_RS06390 PF03861 ANTAR domain A5904_RS06395 PF14490 Helix-hairpin-helix containing domain A5904_RS06395 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain A5904_RS06395 PF13538 UvrD-like helicase C-terminal domain A5904_RS06415 PF07885 Ion channel A5904_RS06415 PF02254 TrkA-N domain A5904_RS06445 PF13784 Fic/DOC family N-terminal A5904_RS06445 PF02661 Fic/DOC family A5904_RS06500 PF01638 HxlR-like helix-turn-helix A5904_RS06505 PF03358 NADPH-dependent FMN reductase A5904_RS06510 PF04264 YceI-like domain A5904_RS06515 PF07694 5TMR of 5TMR-LYT A5904_RS06515 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS06520 PF03466 LysR substrate binding domain A5904_RS06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS06525 PF00361 Proton-conducting membrane transporter A5904_RS06525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A5904_RS06530 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) A5904_RS06535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A5904_RS06535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A5904_RS06570 PF13411 MerR HTH family regulatory protein A5904_RS06580 PF02321 Outer membrane efflux protein A5904_RS06585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A5904_RS06590 PF00005 ABC transporter A5904_RS06620 PF05114 Protein of unknown function (DUF692) A5904_RS06640 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06640 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06640 PF01610 Transposase A5904_RS06655 PF02683 Cytochrome C biogenesis protein transmembrane region A5904_RS06655 PF11412 Disulphide bond corrector protein DsbC A5904_RS06665 PF00665 Integrase core domain A5904_RS06670 PF01695 IstB-like ATP binding protein A5904_RS06680 PF05717 IS66 Orf2 like protein A5904_RS06685 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS06685 PF13817 IS66 C-terminal element A5904_RS06685 PF03050 Transposase IS66 family A5904_RS06685 PF13007 Transposase C of IS166 homeodomain A5904_RS06710 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS06710 PF00403 Heavy-metal-associated domain A5904_RS06710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A5904_RS06720 PF00376 MerR family regulatory protein A5904_RS06720 PF09278 MerR, DNA binding A5904_RS06725 PF09137 Glucodextranase, domain N A5904_RS06725 PF00723 Glycosyl hydrolases family 15 A5904_RS06740 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS06740 PF13817 IS66 C-terminal element A5904_RS06740 PF03050 Transposase IS66 family A5904_RS06740 PF13007 Transposase C of IS166 homeodomain A5904_RS06745 PF05717 IS66 Orf2 like protein A5904_RS06760 PF01610 Transposase A5904_RS06760 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS06760 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS06765 PF00872 Transposase, Mutator family A5904_RS06780 PF00589 Phage integrase family A5904_RS06795 PF09115 DNA polymerase III, delta subunit, C terminal A5904_RS06800 PF02223 Thymidylate kinase A5904_RS06805 PF02618 YceG-like family A5904_RS06810 PF01063 Amino-transferase class IV A5904_RS06815 PF02801 Beta-ketoacyl synthase, C-terminal domain A5904_RS06815 PF00109 Beta-ketoacyl synthase, N-terminal domain A5904_RS06820 PF00550 Phosphopantetheine attachment site A5904_RS06830 PF00698 Acyl transferase domain A5904_RS06835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A5904_RS06835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A5904_RS06840 PF02504 Fatty acid synthesis protein A5904_RS06845 PF01783 Ribosomal L32p protein family A5904_RS06855 PF03631 Virulence factor BrkB A5904_RS06865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A5904_RS06865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A5904_RS06870 PF00586 AIR synthase related protein, N-terminal domain A5904_RS06870 PF02769 AIR synthase related protein, C-terminal domain A5904_RS06875 PF00551 Formyl transferase A5904_RS06880 PF02464 Competence-damaged protein A5904_RS06880 PF18146 Damage-inducible protein CinA KH domain A5904_RS06880 PF00994 Probable molybdopterin binding domain A5904_RS06890 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS06890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A5904_RS06895 PF03976 Polyphosphate kinase 2 (PPK2) A5904_RS06900 PF08206 Ribonuclease B OB domain A5904_RS06900 PF17876 Cold shock domain A5904_RS06900 PF00773 RNB domain A5904_RS06900 PF00575 S1 RNA binding domain A5904_RS06900 PF08461 Ribonuclease R winged-helix domain A5904_RS06960 PF00881 Nitroreductase family A5904_RS06980 PF00440 Bacterial regulatory proteins, tetR family A5904_RS06980 PF16925 Tetracyclin repressor-like, C-terminal domain A5904_RS06985 PF01738 Dienelactone hydrolase family A5904_RS06990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A5904_RS06995 PF00892 EamA-like transporter family A5904_RS07030 PF01451 Low molecular weight phosphotyrosine protein phosphatase A5904_RS07045 PF01979 Amidohydrolase family A5904_RS07060 PF08241 Methyltransferase domain A5904_RS07070 PF00768 D-alanyl-D-alanine carboxypeptidase A5904_RS07070 PF07943 Penicillin-binding protein 5, C-terminal domain A5904_RS07075 PF07690 Major Facilitator Superfamily A5904_RS07080 PF00849 RNA pseudouridylate synthase A5904_RS07080 PF01479 S4 domain A5904_RS07090 PF06969 HemN C-terminal domain A5904_RS07090 PF04055 Radical SAM superfamily A5904_RS07130 PF00155 Aminotransferase class I and II A5904_RS07135 PF02222 ATP-grasp domain A5904_RS07135 PF01370 NAD dependent epimerase/dehydratase family A5904_RS07140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A5904_RS07140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A5904_RS07145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A5904_RS07145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A5904_RS07150 PF01022 Bacterial regulatory protein, arsR family A5904_RS07155 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS07155 PF00672 HAMP domain A5904_RS07165 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A5904_RS07165 PF14850 DNA-binding domain of Proline dehydrogenase A5904_RS07165 PF01619 Proline dehydrogenase A5904_RS07165 PF00171 Aldehyde dehydrogenase family A5904_RS07175 PF01610 Transposase A5904_RS07175 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS07175 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS07205 PF08406 CbbQ/NirQ/NorQ C-terminal A5904_RS07205 PF07728 AAA domain (dynein-related subfamily) A5904_RS07215 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) A5904_RS07225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A5904_RS07225 PF00361 Proton-conducting membrane transporter A5904_RS07225 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus A5904_RS07250 PF00210 Ferritin-like domain A5904_RS07255 PF00936 BMC domain A5904_RS07260 PF00936 BMC domain A5904_RS07265 PF00936 BMC domain A5904_RS07290 PF00101 Ribulose bisphosphate carboxylase, small chain A5904_RS07295 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain A5904_RS07295 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain A5904_RS07300 PF03466 LysR substrate binding domain A5904_RS07300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS07310 PF01207 Dihydrouridine synthase (Dus) A5904_RS07320 PF10417 C-terminal domain of 1-Cys peroxiredoxin A5904_RS07320 PF00578 AhpC/TSA family A5904_RS07330 PF11953 Domain of unknown function (DUF3470) A5904_RS07330 PF00037 4Fe-4S binding domain A5904_RS07335 PF00664 ABC transporter transmembrane region A5904_RS07335 PF00005 ABC transporter A5904_RS07350 PF07726 ATPase family associated with various cellular activities (AAA) A5904_RS07350 PF17863 AAA lid domain A5904_RS07355 PF02347 Glycine cleavage system P-protein A5904_RS07360 PF02347 Glycine cleavage system P-protein A5904_RS07365 PF01597 Glycine cleavage H-protein A5904_RS07370 PF01571 Aminomethyltransferase folate-binding domain A5904_RS07370 PF08669 Glycine cleavage T-protein C-terminal barrel domain A5904_RS07380 PF04461 Protein of unknown function (DUF520) A5904_RS07385 PF02391 MoaE protein A5904_RS07390 PF02597 ThiS family A5904_RS07395 PF08496 Peptidase family S49 N-terminal A5904_RS07395 PF01343 Peptidase family S49 A5904_RS07405 PF01609 Transposase DDE domain A5904_RS07405 PF05598 Transposase domain (DUF772) A5904_RS07420 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS07420 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS07420 PF01610 Transposase A5904_RS07435 PF01593 Flavin containing amine oxidoreductase A5904_RS07440 PF03203 MerC mercury resistance protein A5904_RS07470 PF07690 Major Facilitator Superfamily A5904_RS07480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A5904_RS07480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A5904_RS07480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A5904_RS07480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A5904_RS07485 PF07690 Major Facilitator Superfamily A5904_RS07490 PF00005 ABC transporter A5904_RS07500 PF00950 ABC 3 transport family A5904_RS07510 PF01464 Transglycosylase SLT domain A5904_RS07515 PF03023 Lipid II flippase MurJ A5904_RS07535 PF00085 Thioredoxin A5904_RS07540 PF02601 Exonuclease VII, large subunit A5904_RS07540 PF13742 OB-fold nucleic acid binding domain A5904_RS07550 PF02915 Rubrerythrin A5904_RS07565 PF00106 short chain dehydrogenase A5904_RS07570 PF00664 ABC transporter transmembrane region A5904_RS07570 PF00005 ABC transporter A5904_RS07610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A5904_RS07610 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS07615 PF09179 TilS substrate binding domain A5904_RS07615 PF11734 TilS substrate C-terminal domain A5904_RS07615 PF01171 PP-loop family A5904_RS07620 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A5904_RS07625 PF02811 PHP domain A5904_RS07625 PF14579 Helix-hairpin-helix motif A5904_RS07625 PF07733 Bacterial DNA polymerase III alpha NTPase domain A5904_RS07625 PF01336 OB-fold nucleic acid binding domain A5904_RS07625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A5904_RS07630 PF01351 Ribonuclease HII A5904_RS07635 PF02684 Lipid-A-disaccharide synthetase A5904_RS07640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A5904_RS07650 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A5904_RS07650 PF00132 Bacterial transferase hexapeptide (six repeats) A5904_RS07655 PF07977 FabA-like domain A5904_RS07660 PF00132 Bacterial transferase hexapeptide (six repeats) A5904_RS07660 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A5904_RS07670 PF01103 Surface antigen A5904_RS07670 PF07244 Surface antigen variable number repeat A5904_RS07675 PF17820 PDZ domain A5904_RS07675 PF02163 Peptidase family M50 A5904_RS07680 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A5904_RS07680 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A5904_RS07680 PF13288 DXP reductoisomerase C-terminal domain A5904_RS07690 PF01255 Putative undecaprenyl diphosphate synthase A5904_RS07695 PF01765 Ribosome recycling factor A5904_RS07700 PF00696 Amino acid kinase family A5904_RS07705 PF00889 Elongation factor TS A5904_RS07710 PF00318 Ribosomal protein S2 A5904_RS07720 PF02541 Ppx/GppA phosphatase family A5904_RS07725 PF01895 PhoU domain A5904_RS07730 PF00005 ABC transporter A5904_RS07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS07735 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS07735 PF00989 PAS fold A5904_RS07735 PF11808 Phosphate regulon sensor protein PhoR A5904_RS07740 PF00072 Response regulator receiver domain A5904_RS07740 PF00486 Transcriptional regulatory protein, C terminal A5904_RS07750 PF04384 Iron-sulphur cluster assembly A5904_RS07755 PF00111 2Fe-2S iron-sulfur cluster binding domain A5904_RS07760 PF00012 Hsp70 protein A5904_RS07765 PF00226 DnaJ domain A5904_RS07765 PF07743 HSCB C-terminal oligomerisation domain A5904_RS07770 PF01521 Iron-sulphur cluster biosynthesis A5904_RS07775 PF01592 NifU-like N terminal domain A5904_RS07780 PF00266 Aminotransferase class-V A5904_RS07785 PF02082 Transcriptional regulator A5904_RS07790 PF00132 Bacterial transferase hexapeptide (six repeats) A5904_RS07795 PF00588 SpoU rRNA Methylase family A5904_RS07800 PF00459 Inositol monophosphatase family A5904_RS07810 PF04279 Intracellular septation protein A A5904_RS07815 PF03795 YCII-related domain A5904_RS07825 PF00696 Amino acid kinase family A5904_RS07825 PF00583 Acetyltransferase (GNAT) family A5904_RS07835 PF00920 Dehydratase family A5904_RS07840 PF03949 Malic enzyme, NAD binding domain A5904_RS07840 PF00390 Malic enzyme, N-terminal domain A5904_RS07845 PF01197 Ribosomal protein L31 A5904_RS07850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A5904_RS07850 PF07497 Rho termination factor, RNA-binding domain A5904_RS07850 PF07498 Rho termination factor, N-terminal domain A5904_RS07855 PF00085 Thioredoxin A5904_RS07870 PF00293 NUDIX domain A5904_RS07875 PF00293 NUDIX domain A5904_RS07880 PF01479 S4 domain A5904_RS07880 PF00849 RNA pseudouridylate synthase A5904_RS07885 PF04371 Porphyromonas-type peptidyl-arginine deiminase A5904_RS07890 PF01790 Prolipoprotein diacylglyceryl transferase A5904_RS07895 PF00580 UvrD/REP helicase N-terminal domain A5904_RS07895 PF13361 UvrD-like helicase C-terminal domain A5904_RS07900 PF01649 Ribosomal protein S20 A5904_RS07905 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A5904_RS07905 PF00753 Metallo-beta-lactamase superfamily A5904_RS07905 PF10996 Beta-Casp domain A5904_RS07945 PF00873 AcrB/AcrD/AcrF family A5904_RS07975 PF01590 GAF domain A5904_RS07975 PF02954 Bacterial regulatory protein, Fis family A5904_RS07975 PF00158 Sigma-54 interaction domain A5904_RS07980 PF01609 Transposase DDE domain A5904_RS07980 PF05598 Transposase domain (DUF772) A5904_RS07995 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS07995 PF03707 Bacterial signalling protein N terminal repeat A5904_RS07995 PF00563 EAL domain A5904_RS08000 PF01270 Glycosyl hydrolases family 8 A5904_RS08020 PF01610 Transposase A5904_RS08020 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS08020 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS08025 PF07238 PilZ domain A5904_RS08025 PF00535 Glycosyl transferase family 2 A5904_RS08025 PF03552 Cellulose synthase A5904_RS08030 PF00483 Nucleotidyl transferase A5904_RS08040 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS08040 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS08040 PF01610 Transposase A5904_RS08075 PF01464 Transglycosylase SLT domain A5904_RS08095 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS08095 PF01610 Transposase A5904_RS08095 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS08105 PF00535 Glycosyl transferase family 2 A5904_RS08160 PF01592 NifU-like N terminal domain A5904_RS08165 PF01610 Transposase A5904_RS08165 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS08165 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS08210 PF07804 HipA-like C-terminal domain A5904_RS08210 PF13657 HipA N-terminal domain A5904_RS08215 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS08215 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS08215 PF01610 Transposase A5904_RS08240 PF00158 Sigma-54 interaction domain A5904_RS08240 PF02954 Bacterial regulatory protein, Fis family A5904_RS08240 PF00072 Response regulator receiver domain A5904_RS08245 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS08245 PF00989 PAS fold A5904_RS08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS08250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A5904_RS08250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A5904_RS08255 PF02556 Preprotein translocase subunit SecB A5904_RS08265 PF00149 Calcineurin-like phosphoesterase A5904_RS08275 PF09382 RQC domain A5904_RS08275 PF16124 RecQ zinc-binding A5904_RS08275 PF00570 HRDC domain A5904_RS08275 PF00271 Helicase conserved C-terminal domain A5904_RS08275 PF00270 DEAD/DEAH box helicase A5904_RS08280 PF01491 Frataxin-like domain A5904_RS08300 PF00350 Dynamin family A5904_RS08315 PF02789 Cytosol aminopeptidase family, N-terminal domain A5904_RS08315 PF00883 Cytosol aminopeptidase family, catalytic domain A5904_RS08330 PF10458 Valyl tRNA synthetase tRNA binding arm A5904_RS08330 PF08264 Anticodon-binding domain of tRNA A5904_RS08330 PF00133 tRNA synthetases class I (I, L, M and V) A5904_RS08335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A5904_RS08335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A5904_RS08340 PF13520 Amino acid permease A5904_RS08350 PF01654 Cytochrome bd terminal oxidase subunit I A5904_RS08365 PF01925 Sulfite exporter TauE/SafE A5904_RS08375 PF03129 Anticodon binding domain A5904_RS08375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A5904_RS08375 PF04073 Aminoacyl-tRNA editing domain A5904_RS08380 PF00582 Universal stress protein family A5904_RS08405 PF00873 AcrB/AcrD/AcrF family A5904_RS08425 PF00857 Isochorismatase family A5904_RS08425 PF00550 Phosphopantetheine attachment site A5904_RS08435 PF13277 YmdB-like protein A5904_RS08440 PF01812 5-formyltetrahydrofolate cyclo-ligase family A5904_RS08460 PF00905 Penicillin binding protein transpeptidase domain A5904_RS08460 PF03717 Penicillin-binding Protein dimerisation domain A5904_RS08465 PF01386 Ribosomal L25p family A5904_RS08465 PF14693 Ribosomal protein TL5, C-terminal domain A5904_RS08470 PF01195 Peptidyl-tRNA hydrolase A5904_RS08475 PF06071 Protein of unknown function (DUF933) A5904_RS08475 PF01926 50S ribosome-binding GTPase A5904_RS08480 PF00465 Iron-containing alcohol dehydrogenase A5904_RS08485 PF01610 Transposase A5904_RS08485 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS08485 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS08505 PF02142 MGS-like domain A5904_RS08505 PF01808 AICARFT/IMPCHase bienzyme A5904_RS08510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A5904_RS08510 PF02844 Phosphoribosylglycinamide synthetase, N domain A5904_RS08510 PF02843 Phosphoribosylglycinamide synthetase, C domain A5904_RS08515 PF01300 Telomere recombination A5904_RS08520 PF01218 Coproporphyrinogen III oxidase A5904_RS08525 PF01180 Dihydroorotate dehydrogenase A5904_RS08540 PF00905 Penicillin binding protein transpeptidase domain A5904_RS08540 PF03717 Penicillin-binding Protein dimerisation domain A5904_RS08565 PF01618 MotA/TolQ/ExbB proton channel family A5904_RS08570 PF02472 Biopolymer transport protein ExbD/TolR A5904_RS08590 PF00072 Response regulator receiver domain A5904_RS08590 PF00486 Transcriptional regulatory protein, C terminal A5904_RS08595 PF00929 Exonuclease A5904_RS08605 PF00296 Luciferase-like monooxygenase A5904_RS08610 PF01370 NAD dependent epimerase/dehydratase family A5904_RS08615 PF03167 Uracil DNA glycosylase superfamily A5904_RS08625 PF12848 ABC transporter A5904_RS08625 PF16326 ABC transporter C-terminal domain A5904_RS08625 PF00005 ABC transporter A5904_RS08640 PF00905 Penicillin binding protein transpeptidase domain A5904_RS08640 PF03717 Penicillin-binding Protein dimerisation domain A5904_RS08650 PF00348 Polyprenyl synthetase A5904_RS08655 PF13520 Amino acid permease A5904_RS08675 PF00117 Glutamine amidotransferase class-I A5904_RS08675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A5904_RS08680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A5904_RS08680 PF02142 MGS-like domain A5904_RS08680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A5904_RS08685 PF03449 Transcription elongation factor, N-terminal A5904_RS08685 PF01272 Transcription elongation factor, GreA/GreB, C-term A5904_RS08690 PF02673 Bacitracin resistance protein BacA A5904_RS08695 PF07690 Major Facilitator Superfamily A5904_RS08700 PF01040 UbiA prenyltransferase family A5904_RS08715 PF00510 Cytochrome c oxidase subunit III A5904_RS08720 PF00115 Cytochrome C and Quinol oxidase polypeptide I A5904_RS08725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A5904_RS08725 PF06481 COX Aromatic Rich Motif A5904_RS08735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A5904_RS08740 PF01243 Pyridoxamine 5'-phosphate oxidase A5904_RS08740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A5904_RS08750 PF00694 Aconitase C-terminal domain A5904_RS08755 PF00330 Aconitase family (aconitate hydratase) A5904_RS08760 PF01743 Poly A polymerase head domain A5904_RS08760 PF01966 HD domain A5904_RS08760 PF12627 Probable RNA and SrmB- binding site of polymerase A A5904_RS08765 PF01523 Putative modulator of DNA gyrase A5904_RS08775 PF13495 Phage integrase, N-terminal SAM-like domain A5904_RS08775 PF00589 Phage integrase family A5904_RS08780 PF00436 Single-strand binding protein family A5904_RS08785 PF17760 UvrA interaction domain A5904_RS08785 PF17755 UvrA DNA-binding domain A5904_RS08790 PF01196 Ribosomal protein L17 A5904_RS08795 PF01000 RNA polymerase Rpb3/RpoA insert domain A5904_RS08795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A5904_RS08795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A5904_RS08800 PF01479 S4 domain A5904_RS08800 PF00163 Ribosomal protein S4/S9 N-terminal domain A5904_RS08805 PF00411 Ribosomal protein S11 A5904_RS08810 PF00416 Ribosomal protein S13/S18 A5904_RS08815 PF00444 Ribosomal protein L36 A5904_RS08820 PF01176 Translation initiation factor 1A / IF-1 A5904_RS08825 PF05191 Adenylate kinase, active site lid A5904_RS08830 PF00344 SecY translocase A5904_RS08835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A5904_RS08840 PF00327 Ribosomal protein L30p/L7e A5904_RS08845 PF00333 Ribosomal protein S5, N-terminal domain A5904_RS08845 PF03719 Ribosomal protein S5, C-terminal domain A5904_RS08850 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A5904_RS08855 PF00347 Ribosomal protein L6 A5904_RS08860 PF00410 Ribosomal protein S8 A5904_RS08865 PF00253 Ribosomal protein S14p/S29e A5904_RS08870 PF00281 Ribosomal protein L5 A5904_RS08870 PF00673 ribosomal L5P family C-terminus A5904_RS08875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A5904_RS08875 PF00467 KOW motif A5904_RS08880 PF00238 Ribosomal protein L14p/L23e A5904_RS08885 PF00366 Ribosomal protein S17 A5904_RS08890 PF00831 Ribosomal L29 protein A5904_RS08895 PF00252 Ribosomal protein L16p/L10e A5904_RS08900 PF07650 KH domain A5904_RS08900 PF00189 Ribosomal protein S3, C-terminal domain A5904_RS08905 PF00237 Ribosomal protein L22p/L17e A5904_RS08910 PF00203 Ribosomal protein S19 A5904_RS08915 PF03947 Ribosomal Proteins L2, C-terminal domain A5904_RS08915 PF00181 Ribosomal Proteins L2, RNA binding domain A5904_RS08920 PF00276 Ribosomal protein L23 A5904_RS08925 PF00573 Ribosomal protein L4/L1 family A5904_RS08930 PF00297 Ribosomal protein L3 A5904_RS08935 PF00338 Ribosomal protein S10p/S20e A5904_RS08940 PF03143 Elongation factor Tu C-terminal domain A5904_RS08940 PF03144 Elongation factor Tu domain 2 A5904_RS08940 PF00009 Elongation factor Tu GTP binding domain A5904_RS08945 PF03764 Elongation factor G, domain IV A5904_RS08945 PF00009 Elongation factor Tu GTP binding domain A5904_RS08945 PF03144 Elongation factor Tu domain 2 A5904_RS08945 PF00679 Elongation factor G C-terminus A5904_RS08945 PF14492 Elongation Factor G, domain II A5904_RS08950 PF00177 Ribosomal protein S7p/S5e A5904_RS08955 PF00164 Ribosomal protein S12/S23 A5904_RS08960 PF04983 RNA polymerase Rpb1, domain 3 A5904_RS08960 PF04997 RNA polymerase Rpb1, domain 1 A5904_RS08960 PF05000 RNA polymerase Rpb1, domain 4 A5904_RS08960 PF04998 RNA polymerase Rpb1, domain 5 A5904_RS08960 PF00623 RNA polymerase Rpb1, domain 2 A5904_RS08965 PF04565 RNA polymerase Rpb2, domain 3 A5904_RS08965 PF10385 RNA polymerase beta subunit external 1 domain A5904_RS08965 PF00562 RNA polymerase Rpb2, domain 6 A5904_RS08965 PF04560 RNA polymerase Rpb2, domain 7 A5904_RS08965 PF04561 RNA polymerase Rpb2, domain 2 A5904_RS08965 PF04563 RNA polymerase beta subunit A5904_RS08970 PF00542 Ribosomal protein L7/L12 C-terminal domain A5904_RS08970 PF16320 Ribosomal protein L7/L12 dimerisation domain A5904_RS08975 PF00466 Ribosomal protein L10 A5904_RS08980 PF00687 Ribosomal protein L1p/L10e family A5904_RS08985 PF03946 Ribosomal protein L11, N-terminal domain A5904_RS08985 PF00298 Ribosomal protein L11, RNA binding domain A5904_RS08990 PF00467 KOW motif A5904_RS08990 PF02357 Transcription termination factor nusG A5904_RS08995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A5904_RS09005 PF03144 Elongation factor Tu domain 2 A5904_RS09005 PF03143 Elongation factor Tu C-terminal domain A5904_RS09005 PF00009 Elongation factor Tu GTP binding domain A5904_RS09025 PF00691 OmpA family A5904_RS09025 PF04972 BON domain A5904_RS09030 PF03109 ABC1 family A5904_RS09045 PF01029 NusB family A5904_RS09050 PF00885 6,7-dimethyl-8-ribityllumazine synthase A5904_RS09055 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A5904_RS09055 PF00925 GTP cyclohydrolase II A5904_RS09060 PF00677 Lumazine binding domain A5904_RS09065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A5904_RS09065 PF01872 RibD C-terminal domain A5904_RS09070 PF03477 ATP cone domain A5904_RS09075 PF00464 Serine hydroxymethyltransferase A5904_RS09090 PF00085 Thioredoxin A5904_RS09095 PF13180 PDZ domain A5904_RS09100 PF02899 Phage integrase, N-terminal SAM-like domain A5904_RS09100 PF00589 Phage integrase family A5904_RS09105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A5904_RS09105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A5904_RS09115 PF01245 Ribosomal protein L19 A5904_RS09120 PF01746 tRNA (Guanine-1)-methyltransferase A5904_RS09125 PF05239 PRC-barrel domain A5904_RS09125 PF01782 RimM N-terminal domain A5904_RS09130 PF00886 Ribosomal protein S16 A5904_RS09135 PF02881 SRP54-type protein, helical bundle domain A5904_RS09135 PF00448 SRP54-type protein, GTPase domain A5904_RS09135 PF02978 Signal peptide binding domain A5904_RS09150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A5904_RS09150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A5904_RS09150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A5904_RS09150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A5904_RS09185 PF01022 Bacterial regulatory protein, arsR family A5904_RS09205 PF01209 ubiE/COQ5 methyltransferase family A5904_RS09220 PF00581 Rhodanese-like domain A5904_RS09220 PF00753 Metallo-beta-lactamase superfamily A5904_RS09230 PF07690 Major Facilitator Superfamily A5904_RS09245 PF11412 Disulphide bond corrector protein DsbC A5904_RS09245 PF02683 Cytochrome C biogenesis protein transmembrane region A5904_RS09265 PF05114 Protein of unknown function (DUF692) A5904_RS09280 PF00795 Carbon-nitrogen hydrolase A5904_RS09285 PF11799 impB/mucB/samB family C-terminal domain A5904_RS09285 PF00817 impB/mucB/samB family A5904_RS09310 PF03050 Transposase IS66 family A5904_RS09310 PF13817 IS66 C-terminal element A5904_RS09310 PF13007 Transposase C of IS166 homeodomain A5904_RS09310 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS09315 PF05717 IS66 Orf2 like protein A5904_RS09335 PF00027 Cyclic nucleotide-binding domain A5904_RS09335 PF13545 Crp-like helix-turn-helix domain A5904_RS09340 PF00970 Oxidoreductase FAD-binding domain A5904_RS09340 PF00175 Oxidoreductase NAD-binding domain A5904_RS09340 PF00042 Globin A5904_RS09345 PF00175 Oxidoreductase NAD-binding domain A5904_RS09345 PF00970 Oxidoreductase FAD-binding domain A5904_RS09345 PF00111 2Fe-2S iron-sulfur cluster binding domain A5904_RS09360 PF01597 Glycine cleavage H-protein A5904_RS09375 PF03595 Voltage-dependent anion channel A5904_RS09380 PF00043 Glutathione S-transferase, C-terminal domain A5904_RS09380 PF02798 Glutathione S-transferase, N-terminal domain A5904_RS09385 PF00037 4Fe-4S binding domain A5904_RS09385 PF11953 Domain of unknown function (DUF3470) A5904_RS09400 PF01568 Molydopterin dinucleotide binding domain A5904_RS09400 PF14710 Respiratory nitrate reductase alpha N-terminal A5904_RS09400 PF00384 Molybdopterin oxidoreductase A5904_RS09405 PF13247 4Fe-4S dicluster domain A5904_RS09405 PF14711 Respiratory nitrate reductase beta C-terminal A5904_RS09410 PF02613 Nitrate reductase delta subunit A5904_RS09415 PF02665 Nitrate reductase gamma subunit A5904_RS09425 PF07690 Major Facilitator Superfamily A5904_RS09430 PF04343 Protein of unknown function, DUF488 A5904_RS09435 PF14759 Reductase C-terminal A5904_RS09435 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS09440 PF13533 Biotin-lipoyl like A5904_RS09445 PF00665 Integrase core domain A5904_RS09450 PF01695 IstB-like ATP binding protein A5904_RS09455 PF02321 Outer membrane efflux protein A5904_RS09460 PF07690 Major Facilitator Superfamily A5904_RS09470 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS09470 PF01610 Transposase A5904_RS09470 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS09495 PF01610 Transposase A5904_RS09495 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS09495 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS09505 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS09505 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS09505 PF01610 Transposase A5904_RS09525 PF01026 TatD related DNase A5904_RS09530 PF00588 SpoU rRNA Methylase family A5904_RS09530 PF08032 RNA 2'-O ribose methyltransferase substrate binding A5904_RS09540 PF01594 AI-2E family transporter A5904_RS09545 PF02811 PHP domain A5904_RS09555 PF01594 AI-2E family transporter A5904_RS09560 PF01593 Flavin containing amine oxidoreductase A5904_RS09570 PF00270 DEAD/DEAH box helicase A5904_RS09570 PF00271 Helicase conserved C-terminal domain A5904_RS09570 PF17191 RecG wedge domain A5904_RS09580 PF01042 Endoribonuclease L-PSP A5904_RS09585 PF04607 Region found in RelA / SpoT proteins A5904_RS09585 PF13291 ACT domain A5904_RS09585 PF02824 TGS domain A5904_RS09590 PF01192 RNA polymerase Rpb6 A5904_RS09595 PF00625 Guanylate kinase A5904_RS09600 PF08340 Domain of unknown function (DUF1732) A5904_RS09600 PF03755 YicC-like family, N-terminal region A5904_RS09605 PF03710 Glutamate-ammonia ligase adenylyltransferase A5904_RS09605 PF08335 GlnD PII-uridylyltransferase A5904_RS09610 PF01063 Amino-transferase class IV A5904_RS09620 PF02683 Cytochrome C biogenesis protein transmembrane region A5904_RS09620 PF11412 Disulphide bond corrector protein DsbC A5904_RS09625 PF03091 CutA1 divalent ion tolerance protein A5904_RS09630 PF00990 Diguanylate cyclase, GGDEF domain A5904_RS09630 PF03707 Bacterial signalling protein N terminal repeat A5904_RS09630 PF00563 EAL domain A5904_RS09655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A5904_RS09675 PF00589 Phage integrase family A5904_RS09775 PF02321 Outer membrane efflux protein A5904_RS09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A5904_RS09785 PF00873 AcrB/AcrD/AcrF family A5904_RS09790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A5904_RS09790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A5904_RS09795 PF17941 Polyphosphate kinase C-terminal domain 1 A5904_RS09795 PF13090 Polyphosphate kinase C-terminal domain 2 A5904_RS09795 PF13089 Polyphosphate kinase N-terminal domain A5904_RS09795 PF02503 Polyphosphate kinase middle domain A5904_RS09805 PF01928 CYTH domain A5904_RS09815 PF01433 Peptidase family M1 domain A5904_RS09815 PF11940 Domain of unknown function (DUF3458) Ig-like fold A5904_RS09815 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A5904_RS09820 PF13098 Thioredoxin-like domain A5904_RS09825 PF10431 C-terminal, D2-small domain, of ClpB protein A5904_RS09825 PF02861 Clp amino terminal domain, pathogenicity island component A5904_RS09825 PF17871 AAA lid domain A5904_RS09825 PF00004 ATPase family associated with various cellular activities (AAA) A5904_RS09825 PF07724 AAA domain (Cdc48 subfamily) A5904_RS09830 PF03825 Nucleoside H+ symporter A5904_RS09835 PF01264 Chorismate synthase A5904_RS09840 PF02649 Type I GTP cyclohydrolase folE2 A5904_RS09845 PF02780 Transketolase, C-terminal domain A5904_RS09845 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A5904_RS09845 PF02779 Transketolase, pyrimidine binding domain A5904_RS09850 PF00348 Polyprenyl synthetase A5904_RS09855 PF02609 Exonuclease VII small subunit A5904_RS09860 PF07549 SecD/SecF GG Motif A5904_RS09860 PF02355 Protein export membrane protein A5904_RS09865 PF02355 Protein export membrane protein A5904_RS09865 PF13721 SecD export protein N-terminal TM region A5904_RS09865 PF07549 SecD/SecF GG Motif A5904_RS09870 PF02699 Preprotein translocase subunit A5904_RS09875 PF01702 Queuine tRNA-ribosyltransferase A5904_RS09880 PF02547 Queuosine biosynthesis protein A5904_RS09885 PF03471 Transporter associated domain A5904_RS09885 PF01595 Cyclin M transmembrane N-terminal domain A5904_RS09885 PF00571 CBS domain A5904_RS09895 PF01053 Cys/Met metabolism PLP-dependent enzyme A5904_RS09900 PF13537 Glutamine amidotransferase domain A5904_RS09900 PF00156 Phosphoribosyl transferase domain A5904_RS09910 PF08245 Mur ligase middle domain A5904_RS09910 PF02875 Mur ligase family, glutamate ligase domain A5904_RS09915 PF17848 Acetyl-coA carboxylase zinc finger domain A5904_RS09915 PF01039 Carboxyl transferase domain A5904_RS09920 PF00290 Tryptophan synthase alpha chain A5904_RS09925 PF00291 Pyridoxal-phosphate dependent enzyme A5904_RS09930 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A5904_RS09935 PF01416 tRNA pseudouridine synthase A5904_RS09945 PF01118 Semialdehyde dehydrogenase, NAD binding domain A5904_RS09945 PF02774 Semialdehyde dehydrogenase, dimerisation domain A5904_RS09950 PF00180 Isocitrate/isopropylmalate dehydrogenase A5904_RS09960 PF12804 MobA-like NTP transferase domain A5904_RS09965 PF03205 Molybdopterin guanine dinucleotide synthesis protein B A5904_RS09970 PF00994 Probable molybdopterin binding domain A5904_RS09970 PF03454 MoeA C-terminal region (domain IV) A5904_RS09970 PF03453 MoeA N-terminal region (domain I and II) A5904_RS09975 PF13091 PLD-like domain A5904_RS09990 PF13419 Haloacid dehalogenase-like hydrolase A5904_RS10000 PF00872 Transposase, Mutator family A5904_RS10015 PF02322 Cytochrome bd terminal oxidase subunit II A5904_RS10020 PF01654 Cytochrome bd terminal oxidase subunit I A5904_RS10045 PF00005 ABC transporter A5904_RS10065 PF07690 Major Facilitator Superfamily A5904_RS10070 PF00582 Universal stress protein family A5904_RS10080 PF02769 AIR synthase related protein, C-terminal domain A5904_RS10080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A5904_RS10080 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A5904_RS10085 PF01259 SAICAR synthetase A5904_RS10090 PF10397 Adenylosuccinate lyase C-terminus A5904_RS10090 PF00206 Lyase A5904_RS10100 PF00701 Dihydrodipicolinate synthetase family A5904_RS10110 PF00166 Chaperonin 10 Kd subunit A5904_RS10115 PF00118 TCP-1/cpn60 chaperonin family A5904_RS10120 PF00156 Phosphoribosyl transferase domain A5904_RS10125 PF14306 PUA-like domain A5904_RS10125 PF01747 ATP-sulfurylase A5904_RS10135 PF01578 Cytochrome C assembly protein A5904_RS10150 PF05140 ResB-like family A5904_RS10165 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS10165 PF01610 Transposase A5904_RS10165 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS10195 PF00510 Cytochrome c oxidase subunit III A5904_RS10200 PF00115 Cytochrome C and Quinol oxidase polypeptide I A5904_RS10205 PF06481 COX Aromatic Rich Motif A5904_RS10205 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A5904_RS10210 PF01695 IstB-like ATP binding protein A5904_RS10215 PF00665 Integrase core domain A5904_RS10225 PF02934 GatB/GatE catalytic domain A5904_RS10225 PF02637 GatB domain A5904_RS10230 PF01425 Amidase A5904_RS10235 PF02686 Glu-tRNAGln amidotransferase C subunit A5904_RS10245 PF05494 MlaC protein A5904_RS10250 PF06463 Molybdenum Cofactor Synthesis C A5904_RS10250 PF04055 Radical SAM superfamily A5904_RS10270 PF04794 YdjC-like protein A5904_RS10275 PF01938 TRAM domain A5904_RS10275 PF00919 Uncharacterized protein family UPF0004 A5904_RS10275 PF04055 Radical SAM superfamily A5904_RS10285 PF01370 NAD dependent epimerase/dehydratase family A5904_RS10295 PF13249 Squalene-hopene cyclase N-terminal domain A5904_RS10295 PF13243 Squalene-hopene cyclase C-terminal domain A5904_RS10305 PF00005 ABC transporter A5904_RS10315 PF00005 ABC transporter A5904_RS10320 PF02687 FtsX-like permease family A5904_RS10320 PF12704 MacB-like periplasmic core domain A5904_RS10335 PF00899 ThiF family A5904_RS10350 PF02405 Permease MlaE A5904_RS10355 PF00005 ABC transporter A5904_RS10360 PF02321 Outer membrane efflux protein A5904_RS10365 PF00425 chorismate binding enzyme A5904_RS10365 PF04715 Anthranilate synthase component I, N terminal region A5904_RS10370 PF00128 Alpha amylase, catalytic domain A5904_RS10370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A5904_RS10405 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system A5904_RS10410 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system A5904_RS10420 PF04545 Sigma-70, region 4 A5904_RS10420 PF04539 Sigma-70 region 3 A5904_RS10420 PF04542 Sigma-70 region 2 A5904_RS10420 PF00140 Sigma-70 factor, region 1.2 A5904_RS10420 PF04546 Sigma-70, non-essential region A5904_RS10420 PF03979 Sigma-70 factor, region 1.1 A5904_RS10425 PF08275 DNA primase catalytic core, N-terminal domain A5904_RS10425 PF13662 Toprim domain A5904_RS10425 PF08278 DNA primase DnaG DnaB-binding A5904_RS10425 PF01807 CHC2 zinc finger A5904_RS10425 PF10410 DnaB-helicase binding domain of primase A5904_RS10430 PF00488 MutS domain V A5904_RS10430 PF01713 Smr domain A5904_RS10435 PF09424 Yqey-like protein A5904_RS10440 PF01165 Ribosomal protein S21 A5904_RS10445 PF04545 Sigma-70, region 4 A5904_RS10445 PF00140 Sigma-70 factor, region 1.2 A5904_RS10445 PF04542 Sigma-70 region 2 A5904_RS10445 PF04539 Sigma-70 region 3 A5904_RS10450 PF01725 Ham1 family A5904_RS10455 PF01138 3' exoribonuclease family, domain 1 A5904_RS10455 PF03725 3' exoribonuclease family, domain 2 A5904_RS10465 PF00183 Hsp90 protein A5904_RS10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS10470 PF04241 Protein of unknown function (DUF423) A5904_RS10485 PF00535 Glycosyl transferase family 2 A5904_RS10495 PF04349 Periplasmic glucan biosynthesis protein, MdoG A5904_RS10500 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS10500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A5904_RS10510 PF00158 Sigma-54 interaction domain A5904_RS10510 PF02954 Bacterial regulatory protein, Fis family A5904_RS10510 PF00072 Response regulator receiver domain A5904_RS10515 PF00753 Metallo-beta-lactamase superfamily A5904_RS10515 PF16123 Hydroxyacylglutathione hydrolase C-terminus A5904_RS10520 PF01654 Cytochrome bd terminal oxidase subunit I A5904_RS10525 PF02322 Cytochrome bd terminal oxidase subunit II A5904_RS10540 PF13667 ThiC-associated domain A5904_RS10540 PF01964 Radical SAM ThiC family A5904_RS10560 PF01430 Hsp33 protein A5904_RS10565 PF01171 PP-loop family A5904_RS10570 PF01467 Cytidylyltransferase-like A5904_RS10570 PF00294 pfkB family carbohydrate kinase A5904_RS10575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A5904_RS10575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A5904_RS10575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A5904_RS10580 PF01648 4'-phosphopantetheinyl transferase superfamily A5904_RS10585 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A5904_RS10590 PF02565 Recombination protein O C terminal A5904_RS10590 PF11967 Recombination protein O N terminal A5904_RS10595 PF07650 KH domain A5904_RS10595 PF01926 50S ribosome-binding GTPase A5904_RS10600 PF14622 Ribonuclease-III-like A5904_RS10600 PF00035 Double-stranded RNA binding motif A5904_RS10610 PF10502 Signal peptidase, peptidase S26 A5904_RS10615 PF00679 Elongation factor G C-terminus A5904_RS10615 PF06421 GTP-binding protein LepA C-terminus A5904_RS10615 PF03144 Elongation factor Tu domain 2 A5904_RS10615 PF00009 Elongation factor Tu GTP binding domain A5904_RS10620 PF13180 PDZ domain A5904_RS10630 PF08281 Sigma-70, region 4 A5904_RS10630 PF04542 Sigma-70 region 2 A5904_RS10635 PF00890 FAD binding domain A5904_RS10635 PF02910 Fumarate reductase flavoprotein C-term A5904_RS10640 PF01571 Aminomethyltransferase folate-binding domain A5904_RS10650 PF00005 ABC transporter A5904_RS10650 PF00664 ABC transporter transmembrane region A5904_RS10655 PF00664 ABC transporter transmembrane region A5904_RS10655 PF00005 ABC transporter A5904_RS10670 PF00009 Elongation factor Tu GTP binding domain A5904_RS10670 PF16658 Class II release factor RF3, C-terminal domain A5904_RS10670 PF03144 Elongation factor Tu domain 2 A5904_RS10680 PF00814 Glycoprotease family A5904_RS10685 PF13307 Helicase C-terminal domain A5904_RS10685 PF04851 Type III restriction enzyme, res subunit A5904_RS10695 PF01578 Cytochrome C assembly protein A5904_RS10700 PF00877 NlpC/P60 family A5904_RS10715 PF00795 Carbon-nitrogen hydrolase A5904_RS10725 PF09335 SNARE associated Golgi protein A5904_RS10740 PF03466 LysR substrate binding domain A5904_RS10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS10755 PF00850 Histone deacetylase domain A5904_RS10765 PF08406 CbbQ/NirQ/NorQ C-terminal A5904_RS10765 PF07728 AAA domain (dynein-related subfamily) A5904_RS10805 PF01494 FAD binding domain A5904_RS10810 PF10437 Bacterial lipoate protein ligase C-terminus A5904_RS10810 PF03099 Biotin/lipoate A/B protein ligase family A5904_RS10820 PF01597 Glycine cleavage H-protein A5904_RS10830 PF01597 Glycine cleavage H-protein A5904_RS10835 PF02754 Cysteine-rich domain A5904_RS10850 PF01593 Flavin containing amine oxidoreductase A5904_RS10865 PF13686 DsrE/DsrF/DrsH-like family A5904_RS10870 PF01206 Sulfurtransferase TusA A5904_RS10875 PF00581 Rhodanese-like domain A5904_RS10880 PF06463 Molybdenum Cofactor Synthesis C A5904_RS10880 PF04055 Radical SAM superfamily A5904_RS10885 PF04976 DMSO reductase anchor subunit (DmsC) A5904_RS10890 PF12800 4Fe-4S binding domain A5904_RS10890 PF13247 4Fe-4S dicluster domain A5904_RS10895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A5904_RS10895 PF01568 Molydopterin dinucleotide binding domain A5904_RS10895 PF00384 Molybdopterin oxidoreductase A5904_RS10905 PF01967 MoaC family A5904_RS10915 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS10915 PF00989 PAS fold A5904_RS10915 PF00672 HAMP domain A5904_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS10920 PF02954 Bacterial regulatory protein, Fis family A5904_RS10920 PF00072 Response regulator receiver domain A5904_RS10920 PF00158 Sigma-54 interaction domain A5904_RS10925 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP A5904_RS10925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A5904_RS10925 PF00034 Cytochrome c A5904_RS10945 PF03625 Domain of unknown function DUF302 A5904_RS10950 PF02872 5'-nucleotidase, C-terminal domain A5904_RS10950 PF00149 Calcineurin-like phosphoesterase A5904_RS10960 PF04085 rod shape-determining protein MreC A5904_RS10970 PF00905 Penicillin binding protein transpeptidase domain A5904_RS10970 PF03717 Penicillin-binding Protein dimerisation domain A5904_RS10975 PF01098 Cell cycle protein A5904_RS10980 PF07943 Penicillin-binding protein 5, C-terminal domain A5904_RS10980 PF00768 D-alanyl-D-alanine carboxypeptidase A5904_RS10990 PF03099 Biotin/lipoate A/B protein ligase family A5904_RS10995 PF04055 Radical SAM superfamily A5904_RS10995 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A5904_RS11040 PF02091 Glycyl-tRNA synthetase alpha subunit A5904_RS11045 PF02092 Glycyl-tRNA synthetase beta subunit A5904_RS11060 PF18030 RimK PreATP-grasp domain A5904_RS11060 PF08443 RimK-like ATP-grasp domain A5904_RS11080 PF08534 Redoxin A5904_RS11085 PF01329 Pterin 4 alpha carbinolamine dehydratase A5904_RS11090 PF02677 Epoxyqueuosine reductase QueH A5904_RS11100 PF01510 N-acetylmuramoyl-L-alanine amidase A5904_RS11110 PF10417 C-terminal domain of 1-Cys peroxiredoxin A5904_RS11110 PF00578 AhpC/TSA family A5904_RS11115 PF08502 LeuA allosteric (dimerisation) domain A5904_RS11115 PF00682 HMGL-like A5904_RS11120 PF03618 Kinase/pyrophosphorylase A5904_RS11135 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS11135 PF01610 Transposase A5904_RS11135 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS11140 PF00665 Integrase core domain A5904_RS11145 PF01695 IstB-like ATP binding protein A5904_RS11150 PF05598 Transposase domain (DUF772) A5904_RS11150 PF01609 Transposase DDE domain A5904_RS11155 PF13183 4Fe-4S dicluster domain A5904_RS11155 PF02754 Cysteine-rich domain A5904_RS11160 PF01565 FAD binding domain A5904_RS11165 PF02913 FAD linked oxidases, C-terminal domain A5904_RS11165 PF01565 FAD binding domain A5904_RS11180 PF01614 Bacterial transcriptional regulator A5904_RS11180 PF09339 IclR helix-turn-helix domain A5904_RS11190 PF02595 Glycerate kinase family A5904_RS11205 PF00158 Sigma-54 interaction domain A5904_RS11205 PF13185 GAF domain A5904_RS11205 PF02954 Bacterial regulatory protein, Fis family A5904_RS11235 PF01327 Polypeptide deformylase A5904_RS11245 PF00596 Class II Aldolase and Adducin N-terminal domain A5904_RS11255 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain A5904_RS11255 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain A5904_RS11260 PF03079 ARD/ARD' family A5904_RS11265 PF02578 Multi-copper polyphenol oxidoreductase laccase A5904_RS11270 PF00849 RNA pseudouridylate synthase A5904_RS11275 PF13525 Outer membrane lipoprotein A5904_RS11280 PF00543 Nitrogen regulatory protein P-II A5904_RS11285 PF00795 Carbon-nitrogen hydrolase A5904_RS11285 PF02540 NAD synthase A5904_RS11290 PF02629 CoA binding domain A5904_RS11290 PF00549 CoA-ligase A5904_RS11300 PF08442 ATP-grasp domain A5904_RS11300 PF00549 CoA-ligase A5904_RS11305 PF00180 Isocitrate/isopropylmalate dehydrogenase A5904_RS11310 PF00330 Aconitase family (aconitate hydratase) A5904_RS11315 PF00916 Sulfate permease family A5904_RS11315 PF01740 STAS domain A5904_RS11320 PF00749 tRNA synthetases class I (E and Q), catalytic domain A5904_RS11325 PF01476 LysM domain A5904_RS11325 PF01464 Transglycosylase SLT domain A5904_RS11335 PF00923 Transaldolase/Fructose-6-phosphate aldolase A5904_RS11345 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A5904_RS11350 PF00149 Calcineurin-like phosphoesterase A5904_RS11355 PF00696 Amino acid kinase family A5904_RS11355 PF13840 ACT domain A5904_RS11355 PF01842 ACT domain A5904_RS11360 PF00202 Aminotransferase class-III A5904_RS11365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A5904_RS11365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A5904_RS11370 PF00764 Arginosuccinate synthase A5904_RS11375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A5904_RS11380 PF00929 Exonuclease A5904_RS11385 PF00075 RNase H A5904_RS11390 PF01209 ubiE/COQ5 methyltransferase family A5904_RS11395 PF00753 Metallo-beta-lactamase superfamily A5904_RS11395 PF16123 Hydroxyacylglutathione hydrolase C-terminus A5904_RS11400 PF00675 Insulinase (Peptidase family M16) A5904_RS11400 PF05193 Peptidase M16 inactive domain A5904_RS11405 PF00575 S1 RNA binding domain A5904_RS11405 PF03725 3' exoribonuclease family, domain 2 A5904_RS11405 PF01138 3' exoribonuclease family, domain 1 A5904_RS11405 PF00013 KH domain A5904_RS11405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A5904_RS11410 PF00312 Ribosomal protein S15 A5904_RS11415 PF16198 tRNA pseudouridylate synthase B C-terminal domain A5904_RS11415 PF09157 Pseudouridine synthase II TruB, C-terminal A5904_RS11415 PF01509 TruB family pseudouridylate synthase (N terminal domain) A5904_RS11420 PF02033 Ribosome-binding factor A A5904_RS11425 PF04760 Translation initiation factor IF-2, N-terminal region A5904_RS11425 PF11987 Translation-initiation factor 2 A5904_RS11425 PF00009 Elongation factor Tu GTP binding domain A5904_RS11425 PF08364 Bacterial translation initiation factor IF-2 associated region A5904_RS11430 PF08529 NusA N-terminal domain A5904_RS11430 PF00575 S1 RNA binding domain A5904_RS11430 PF13184 NusA-like KH domain A5904_RS11435 PF02576 RimP N-terminal domain A5904_RS11435 PF17384 RimP C-terminal SH3 domain A5904_RS11470 PF00005 ABC transporter A5904_RS11475 PF02517 CPBP intramembrane metalloprotease A5904_RS11485 PF01476 LysM domain A5904_RS11485 PF17969 L,D-transpeptidase C-terminal domain A5904_RS11485 PF03734 L,D-transpeptidase catalytic domain A5904_RS11495 PF02403 Seryl-tRNA synthetase N-terminal domain A5904_RS11495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A5904_RS11500 PF16193 AAA C-terminal domain A5904_RS11500 PF00004 ATPase family associated with various cellular activities (AAA) A5904_RS11500 PF12002 MgsA AAA+ ATPase C terminal A5904_RS11510 PF03548 Outer membrane lipoprotein carrier protein LolA A5904_RS11515 PF17854 FtsK alpha domain A5904_RS11515 PF09397 Ftsk gamma domain A5904_RS11515 PF01580 FtsK/SpoIIIE family A5904_RS11515 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A5904_RS11520 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS11525 PF01713 Smr domain A5904_RS11525 PF00488 MutS domain V A5904_RS11530 PF13411 MerR HTH family regulatory protein A5904_RS11535 PF01142 tRNA pseudouridine synthase D (TruD) A5904_RS11540 PF02542 YgbB family A5904_RS11545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A5904_RS11550 PF03461 TRCF domain A5904_RS11550 PF00270 DEAD/DEAH box helicase A5904_RS11550 PF17757 UvrB interaction domain A5904_RS11550 PF02559 CarD-like/TRCF domain A5904_RS11550 PF00271 Helicase conserved C-terminal domain A5904_RS11560 PF00462 Glutaredoxin A5904_RS11560 PF08534 Redoxin A5904_RS11565 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS11565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A5904_RS11570 PF01048 Phosphorylase superfamily A5904_RS11575 PF00156 Phosphoribosyl transferase domain A5904_RS11595 PF01219 Prokaryotic diacylglycerol kinase A5904_RS11600 PF04002 RadC-like JAB domain A5904_RS11605 PF04127 DNA / pantothenate metabolism flavoprotein A5904_RS11605 PF02441 Flavoprotein A5904_RS11610 PF00692 dUTPase A5904_RS11620 PF00692 dUTPase A5904_RS11625 PF10609 NUBPL iron-transfer P-loop NTPase A5904_RS11635 PF01113 Dihydrodipicolinate reductase, N-terminus A5904_RS11635 PF05173 Dihydrodipicolinate reductase, C-terminus A5904_RS11640 PF00226 DnaJ domain A5904_RS11640 PF00684 DnaJ central domain A5904_RS11640 PF01556 DnaJ C terminal domain A5904_RS11645 PF00012 Hsp70 protein A5904_RS11650 PF01025 GrpE A5904_RS11655 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding A5904_RS11655 PF01628 HrcA protein C terminal domain A5904_RS11660 PF00471 Ribosomal protein L33 A5904_RS11665 PF00830 Ribosomal L28 family A5904_RS11670 PF04244 Deoxyribodipyrimidine photo-lyase-related protein A5904_RS11720 PF00989 PAS fold A5904_RS11725 PF13411 MerR HTH family regulatory protein A5904_RS11725 PF02607 B12 binding domain A5904_RS11730 PF01593 Flavin containing amine oxidoreductase A5904_RS11750 PF00106 short chain dehydrogenase A5904_RS11760 PF00268 Ribonucleotide reductase, small chain A5904_RS11765 PF02867 Ribonucleotide reductase, barrel domain A5904_RS11765 PF03477 ATP cone domain A5904_RS11765 PF00317 Ribonucleotide reductase, all-alpha domain A5904_RS11770 PF01523 Putative modulator of DNA gyrase A5904_RS11775 PF06480 FtsH Extracellular A5904_RS11775 PF00004 ATPase family associated with various cellular activities (AAA) A5904_RS11775 PF01434 Peptidase family M41 A5904_RS11775 PF17862 AAA+ lid domain A5904_RS11780 PF00809 Pterin binding enzyme A5904_RS11785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A5904_RS11785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A5904_RS11785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A5904_RS11785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A5904_RS11790 PF00121 Triosephosphate isomerase A5904_RS11795 PF03840 Preprotein translocase SecG subunit A5904_RS11805 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A5904_RS11810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A5904_RS11815 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A5904_RS11820 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A5904_RS11830 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A5904_RS11830 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A5904_RS11830 PF10531 SLBB domain A5904_RS11835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A5904_RS11835 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal A5904_RS11835 PF00384 Molybdopterin oxidoreductase A5904_RS11840 PF00146 NADH dehydrogenase A5904_RS11845 PF12838 4Fe-4S dicluster domain A5904_RS11850 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A5904_RS11855 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A5904_RS11860 PF00361 Proton-conducting membrane transporter A5904_RS11860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A5904_RS11865 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus A5904_RS11865 PF00361 Proton-conducting membrane transporter A5904_RS11870 PF00361 Proton-conducting membrane transporter A5904_RS11885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A5904_RS11885 PF03129 Anticodon binding domain A5904_RS11885 PF02824 TGS domain A5904_RS11885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A5904_RS11890 PF05198 Translation initiation factor IF-3, N-terminal domain A5904_RS11890 PF00707 Translation initiation factor IF-3, C-terminal domain A5904_RS11895 PF01632 Ribosomal protein L35 A5904_RS11900 PF00453 Ribosomal protein L20 A5904_RS11905 PF01409 tRNA synthetases class II core domain (F) A5904_RS11905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A5904_RS11910 PF03147 Ferredoxin-fold anticodon binding domain A5904_RS11910 PF01588 Putative tRNA binding domain A5904_RS11910 PF03483 B3/4 domain A5904_RS11910 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A5904_RS11910 PF03484 tRNA synthetase B5 domain A5904_RS11915 PF00216 Bacterial DNA-binding protein A5904_RS11920 PF13411 MerR HTH family regulatory protein A5904_RS11930 PF00005 ABC transporter A5904_RS11940 PF02887 Pyruvate kinase, alpha/beta domain A5904_RS11940 PF00224 Pyruvate kinase, barrel domain A5904_RS11940 PF02887 Pyruvate kinase, alpha/beta domain A5904_RS11940 PF00224 Pyruvate kinase, barrel domain A5904_RS11965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A5904_RS11970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A5904_RS11970 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A5904_RS11970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A5904_RS11975 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A5904_RS11975 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A5904_RS11975 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A5904_RS11985 PF10531 SLBB domain A5904_RS11985 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A5904_RS11985 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A5904_RS11990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A5904_RS11990 PF00384 Molybdopterin oxidoreductase A5904_RS11990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A5904_RS11995 PF00146 NADH dehydrogenase A5904_RS12000 PF12838 4Fe-4S dicluster domain A5904_RS12010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A5904_RS12015 PF00361 Proton-conducting membrane transporter A5904_RS12015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A5904_RS12020 PF00361 Proton-conducting membrane transporter A5904_RS12025 PF00361 Proton-conducting membrane transporter A5904_RS12055 PF01475 Ferric uptake regulator family A5904_RS12060 PF04355 SmpA / OmlA family A5904_RS12070 PF13091 PLD-like domain A5904_RS12085 PF01668 SmpB protein A5904_RS12095 PF13098 Thioredoxin-like domain A5904_RS12100 PF02600 Disulfide bond formation protein DsbB A5904_RS12105 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A5904_RS12105 PF02222 ATP-grasp domain A5904_RS12110 PF00731 AIR carboxylase A5904_RS12115 PF02390 Putative methyltransferase A5904_RS12120 PF00325 Bacterial regulatory proteins, crp family A5904_RS12120 PF00027 Cyclic nucleotide-binding domain A5904_RS12125 PF00753 Metallo-beta-lactamase superfamily A5904_RS12145 PF00437 Type II/IV secretion system protein A5904_RS12150 PF00437 Type II/IV secretion system protein A5904_RS12155 PF01168 Alanine racemase, N-terminal domain A5904_RS12160 PF03807 NADP oxidoreductase coenzyme F420-dependent A5904_RS12160 PF14748 Pyrroline-5-carboxylate reductase dimerisation A5904_RS12165 PF02325 YGGT family A5904_RS12170 PF02594 Uncharacterised ACR, YggU family COG1872 A5904_RS12175 PF04055 Radical SAM superfamily A5904_RS12175 PF06968 Biotin and Thiamin Synthesis associated domain A5904_RS12185 PF00529 HlyD membrane-fusion protein of T1SS A5904_RS12185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A5904_RS12195 PF00696 Amino acid kinase family A5904_RS12200 PF00440 Bacterial regulatory proteins, tetR family A5904_RS12220 PF00111 2Fe-2S iron-sulfur cluster binding domain A5904_RS12220 PF00970 Oxidoreductase FAD-binding domain A5904_RS12220 PF00175 Oxidoreductase NAD-binding domain A5904_RS12225 PF00929 Exonuclease A5904_RS12230 PF03649 Uncharacterised protein family (UPF0014) A5904_RS12235 PF04377 Arginine-tRNA-protein transferase, C terminus A5904_RS12235 PF04376 Arginine-tRNA-protein transferase, N terminus A5904_RS12240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A5904_RS12245 PF01435 Peptidase family M48 A5904_RS12255 PF08241 Methyltransferase domain A5904_RS12260 PF00561 alpha/beta hydrolase fold A5904_RS12265 PF00155 Aminotransferase class I and II A5904_RS12270 PF00156 Phosphoribosyl transferase domain A5904_RS12275 PF00588 SpoU rRNA Methylase family A5904_RS12280 PF07690 Major Facilitator Superfamily A5904_RS12285 PF12867 DinB superfamily A5904_RS12285 PF03781 Sulfatase-modifying factor enzyme 1 A5904_RS12290 PF00155 Aminotransferase class I and II A5904_RS12295 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A5904_RS12305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A5904_RS12310 PF00535 Glycosyl transferase family 2 A5904_RS12330 PF13439 Glycosyltransferase Family 4 A5904_RS12330 PF00534 Glycosyl transferases group 1 A5904_RS12340 PF00535 Glycosyl transferase family 2 A5904_RS12345 PF00293 NUDIX domain A5904_RS12350 PF01960 ArgJ family A5904_RS12355 PF01043 SecA preprotein cross-linking domain A5904_RS12355 PF07517 SecA DEAD-like domain A5904_RS12355 PF07516 SecA Wing and Scaffold domain A5904_RS12355 PF02810 SEC-C motif A5904_RS12365 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A5904_RS12370 PF00043 Glutathione S-transferase, C-terminal domain A5904_RS12370 PF02798 Glutathione S-transferase, N-terminal domain A5904_RS12375 PF00501 AMP-binding enzyme A5904_RS12390 PF02381 MraZ protein, putative antitoxin-like A5904_RS12395 PF01795 MraW methylase family A5904_RS12405 PF03717 Penicillin-binding Protein dimerisation domain A5904_RS12405 PF00905 Penicillin binding protein transpeptidase domain A5904_RS12410 PF08245 Mur ligase middle domain A5904_RS12410 PF01225 Mur ligase family, catalytic domain A5904_RS12410 PF02875 Mur ligase family, glutamate ligase domain A5904_RS12415 PF08245 Mur ligase middle domain A5904_RS12415 PF01225 Mur ligase family, catalytic domain A5904_RS12415 PF02875 Mur ligase family, glutamate ligase domain A5904_RS12420 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A5904_RS12420 PF00953 Glycosyl transferase family 4 A5904_RS12425 PF02875 Mur ligase family, glutamate ligase domain A5904_RS12425 PF08245 Mur ligase middle domain A5904_RS12430 PF01098 Cell cycle protein A5904_RS12435 PF04101 Glycosyltransferase family 28 C-terminal domain A5904_RS12435 PF03033 Glycosyltransferase family 28 N-terminal domain A5904_RS12440 PF08245 Mur ligase middle domain A5904_RS12440 PF02875 Mur ligase family, glutamate ligase domain A5904_RS12440 PF01225 Mur ligase family, catalytic domain A5904_RS12445 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A5904_RS12445 PF01565 FAD binding domain A5904_RS12450 PF01820 D-ala D-ala ligase N-terminus A5904_RS12450 PF07478 D-ala D-ala ligase C-terminus A5904_RS12455 PF03799 Cell division protein FtsQ A5904_RS12455 PF08478 POTRA domain, FtsQ-type A5904_RS12460 PF02491 SHS2 domain inserted in FTSA A5904_RS12465 PF00091 Tubulin/FtsZ family, GTPase domain A5904_RS12465 PF12327 FtsZ family, C-terminal domain A5904_RS12470 PF00343 Carbohydrate phosphorylase A5904_RS12475 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A5904_RS12475 PF01676 Metalloenzyme superfamily A5904_RS12485 PF03572 Peptidase family S41 A5904_RS12485 PF13180 PDZ domain A5904_RS12490 PF01965 DJ-1/PfpI family A5904_RS12500 PF02617 ATP-dependent Clp protease adaptor protein ClpS A5904_RS12505 PF02861 Clp amino terminal domain, pathogenicity island component A5904_RS12505 PF17871 AAA lid domain A5904_RS12505 PF07724 AAA domain (Cdc48 subfamily) A5904_RS12505 PF00004 ATPase family associated with various cellular activities (AAA) A5904_RS12505 PF10431 C-terminal, D2-small domain, of ClpB protein A5904_RS12510 PF00561 alpha/beta hydrolase fold A5904_RS12515 PF07021 Methionine biosynthesis protein MetW A5904_RS12515 PF00561 alpha/beta hydrolase fold A5904_RS12520 PF02798 Glutathione S-transferase, N-terminal domain A5904_RS12520 PF00043 Glutathione S-transferase, C-terminal domain A5904_RS12525 PF01209 ubiE/COQ5 methyltransferase family A5904_RS12530 PF08267 Cobalamin-independent synthase, N-terminal domain A5904_RS12530 PF01717 Cobalamin-independent synthase, Catalytic domain A5904_RS12560 PF00905 Penicillin binding protein transpeptidase domain A5904_RS12560 PF03717 Penicillin-binding Protein dimerisation domain A5904_RS12565 PF05036 Sporulation related domain A5904_RS12565 PF03330 Lytic transglycolase A5904_RS12575 PF07885 Ion channel A5904_RS12575 PF02254 TrkA-N domain A5904_RS12580 PF03717 Penicillin-binding Protein dimerisation domain A5904_RS12580 PF00905 Penicillin binding protein transpeptidase domain A5904_RS12585 PF13525 Outer membrane lipoprotein A5904_RS12590 PF13180 PDZ domain A5904_RS12595 PF00768 D-alanyl-D-alanine carboxypeptidase A5904_RS12595 PF07943 Penicillin-binding protein 5, C-terminal domain A5904_RS12600 PF04052 TolB amino-terminal domain A5904_RS12600 PF07676 WD40-like Beta Propeller Repeat A5904_RS12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS12610 PF03466 LysR substrate binding domain A5904_RS12620 PF00829 Ribosomal prokaryotic L21 protein A5904_RS12625 PF01016 Ribosomal L27 protein A5904_RS12630 PF01926 50S ribosome-binding GTPase A5904_RS12630 PF01018 GTP1/OBG A5904_RS12635 PF00696 Amino acid kinase family A5904_RS12635 PF01472 PUA domain A5904_RS12640 PF05736 OprF membrane domain A5904_RS12640 PF00691 OmpA family A5904_RS12645 PF17284 Spermidine synthase tetramerisation domain A5904_RS12650 PF02675 S-adenosylmethionine decarboxylase A5904_RS12655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A5904_RS12655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A5904_RS12665 PF00206 Lyase A5904_RS12665 PF14698 Argininosuccinate lyase C-terminal A5904_RS12680 PF01636 Phosphotransferase enzyme family A5904_RS12690 PF03641 Possible lysine decarboxylase A5904_RS12695 PF01367 5'-3' exonuclease, C-terminal SAM fold A5904_RS12695 PF00476 DNA polymerase family A A5904_RS12695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A5904_RS12695 PF01612 3'-5' exonuclease A5904_RS12700 PF02254 TrkA-N domain A5904_RS12700 PF07885 Ion channel A5904_RS12705 PF01926 50S ribosome-binding GTPase A5904_RS12710 PF05140 ResB-like family A5904_RS12715 PF01578 Cytochrome C assembly protein A5904_RS12725 PF02261 Aspartate decarboxylase A5904_RS12730 PF00689 Cation transporting ATPase, C-terminus A5904_RS12730 PF00690 Cation transporter/ATPase, N-terminus A5904_RS12735 PF08450 SMP-30/Gluconolactonase/LRE-like region A5904_RS12740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A5904_RS12740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A5904_RS12745 PF00083 Sugar (and other) transporter A5904_RS12750 PF12848 ABC transporter A5904_RS12750 PF00005 ABC transporter A5904_RS12770 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS12770 PF01610 Transposase A5904_RS12770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS12825 PF00182 Chitinase class I A5904_RS12850 PF00182 Chitinase class I A5904_RS12875 PF00437 Type II/IV secretion system protein A5904_RS12880 PF13629 Pilus formation protein N terminal region A5904_RS12880 PF04972 BON domain A5904_RS12880 PF00263 Bacterial type II and III secretion system protein A5904_RS12940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A5904_RS12950 PF02021 Uncharacterised protein family UPF0102 A5904_RS12955 PF13580 SIS domain A5904_RS12960 PF01565 FAD binding domain A5904_RS12960 PF02913 FAD linked oxidases, C-terminal domain A5904_RS12970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A5904_RS12975 PF00691 OmpA family A5904_RS12975 PF04972 BON domain A5904_RS12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS12985 PF03466 LysR substrate binding domain A5904_RS12990 PF04055 Radical SAM superfamily A5904_RS12990 PF06969 HemN C-terminal domain A5904_RS13005 PF01106 NifU-like domain A5904_RS13010 PF00919 Uncharacterized protein family UPF0004 A5904_RS13010 PF04055 Radical SAM superfamily A5904_RS13010 PF18693 TRAM domain A5904_RS13020 PF02152 Dihydroneopterin aldolase A5904_RS13025 PF02660 Glycerol-3-phosphate acyltransferase A5904_RS13035 PF00814 Glycoprotease family A5904_RS13040 PF04305 Protein of unknown function (DUF455) A5904_RS13070 PF00255 Glutathione peroxidase A5904_RS13075 PF00579 tRNA synthetases class I (W and Y) A5904_RS13090 PF03050 Transposase IS66 family A5904_RS13090 PF13007 Transposase C of IS166 homeodomain A5904_RS13090 PF13817 IS66 C-terminal element A5904_RS13090 PF13005 zinc-finger binding domain of transposase IS66 A5904_RS13095 PF05717 IS66 Orf2 like protein A5904_RS13130 PF01914 MarC family integral membrane protein A5904_RS13140 PF01336 OB-fold nucleic acid binding domain A5904_RS13140 PF00152 tRNA synthetases class II (D, K and N) A5904_RS13140 PF02938 GAD domain A5904_RS13145 PF00293 NUDIX domain A5904_RS13150 PF02445 Quinolinate synthetase A protein A5904_RS13160 PF01709 Transcriptional regulator A5904_RS13165 PF02075 Crossover junction endodeoxyribonuclease RuvC A5904_RS13170 PF01330 RuvA N terminal domain A5904_RS13170 PF07499 RuvA, C-terminal domain A5904_RS13175 PF17864 RuvB AAA lid domain A5904_RS13175 PF05491 RuvB C-terminal winged helix domain A5904_RS13175 PF05496 Holliday junction DNA helicase RuvB P-loop domain A5904_RS13180 PF03061 Thioesterase superfamily A5904_RS13185 PF01618 MotA/TolQ/ExbB proton channel family A5904_RS13190 PF02472 Biopolymer transport protein ExbD/TolR A5904_RS13200 PF07676 WD40-like Beta Propeller Repeat A5904_RS13200 PF04052 TolB amino-terminal domain A5904_RS13205 PF06508 Queuosine biosynthesis protein QueC A5904_RS13210 PF04055 Radical SAM superfamily A5904_RS13220 PF00691 OmpA family A5904_RS13225 PF03900 Porphobilinogen deaminase, C-terminal domain A5904_RS13225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A5904_RS13235 PF00490 Delta-aminolevulinic acid dehydratase A5904_RS13250 PF00083 Sugar (and other) transporter A5904_RS13255 PF03006 Haemolysin-III related A5904_RS13260 PF00403 Heavy-metal-associated domain A5904_RS13265 PF00403 Heavy-metal-associated domain A5904_RS13265 PF07992 Pyridine nucleotide-disulphide oxidoreductase A5904_RS13265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A5904_RS13280 PF10150 Ribonuclease E/G family A5904_RS13280 PF00575 S1 RNA binding domain A5904_RS13285 PF02545 Maf-like protein A5904_RS13300 PF02590 Predicted SPOUT methyltransferase A5904_RS13310 PF01467 Cytidylyltransferase-like A5904_RS13325 PF03279 Bacterial lipid A biosynthesis acyltransferase A5904_RS13330 PF00011 Hsp20/alpha crystallin family A5904_RS13335 PF10396 GTP-binding protein TrmE N-terminus A5904_RS13335 PF12631 MnmE helical domain A5904_RS13335 PF01926 50S ribosome-binding GTPase A5904_RS13340 PF02096 60Kd inner membrane protein A5904_RS13340 PF14849 YidC periplasmic domain A5904_RS13345 PF01809 Putative membrane protein insertion efficiency factor A5904_RS13350 PF00825 Ribonuclease P A5904_RS13355 PF00468 Ribosomal protein L34 A5904_RS13360 PF00005 ABC transporter A5904_RS13365 PF02405 Permease MlaE A5904_RS13370 PF02470 MlaD protein A5904_RS13385 PF00005 ABC transporter A5904_RS13390 PF01479 S4 domain A5904_RS13395 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A5904_RS13405 PF00398 Ribosomal RNA adenine dimethylase A5904_RS13420 PF03485 Arginyl tRNA synthetase N terminal domain A5904_RS13420 PF00750 tRNA synthetases class I (R) A5904_RS13420 PF05746 DALR anticodon binding domain A5904_RS13425 PF12795 Mechanosensitive ion channel porin domain A5904_RS13425 PF00924 Mechanosensitive ion channel A5904_RS13425 PF12794 Mechanosensitive ion channel inner membrane domain 1 A5904_RS13430 PF07690 Major Facilitator Superfamily A5904_RS13435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS13435 PF03466 LysR substrate binding domain A5904_RS13440 PF05175 Methyltransferase small domain A5904_RS13445 PF03372 Endonuclease/Exonuclease/phosphatase family A5904_RS13455 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A5904_RS13460 PF00043 Glutathione S-transferase, C-terminal domain A5904_RS13460 PF13417 Glutathione S-transferase, N-terminal domain A5904_RS13465 PF03372 Endonuclease/Exonuclease/phosphatase family A5904_RS13470 PF00762 Ferrochelatase A5904_RS13475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A5904_RS13480 PF03702 Anhydro-N-acetylmuramic acid kinase A5904_RS13485 PF01488 Shikimate / quinate 5-dehydrogenase A5904_RS13485 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A5904_RS13485 PF08501 Shikimate dehydrogenase substrate binding domain A5904_RS13490 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A5904_RS13490 PF00437 Type II/IV secretion system protein A5904_RS13495 PF00512 His Kinase A (phospho-acceptor) domain A5904_RS13495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS13500 PF02954 Bacterial regulatory protein, Fis family A5904_RS13500 PF00158 Sigma-54 interaction domain A5904_RS13500 PF00072 Response regulator receiver domain A5904_RS13505 PF01478 Type IV leader peptidase family A5904_RS13505 PF06750 Bacterial Peptidase A24 N-terminal domain A5904_RS13510 PF01121 Dephospho-CoA kinase A5904_RS13515 PF07072 Cell division protein A5904_RS13520 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A5904_RS13525 PF05818 Enterobacterial TraT complement resistance protein A5904_RS13535 PF01551 Peptidase family M23 A5904_RS13535 PF01464 Transglycosylase SLT domain A5904_RS13535 PF10145 Phage-related minor tail protein A5904_RS13540 PF02954 Bacterial regulatory protein, Fis family A5904_RS13555 PF02785 Biotin carboxylase C-terminal domain A5904_RS13555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A5904_RS13555 PF00289 Biotin carboxylase, N-terminal domain A5904_RS13560 PF00364 Biotin-requiring enzyme A5904_RS13565 PF01220 Dehydroquinase class II A5904_RS13570 PF00881 Nitroreductase family A5904_RS13590 PF01230 HIT domain A5904_RS13595 PF00202 Aminotransferase class-III A5904_RS13600 PF02581 Thiamine monophosphate synthase A5904_RS13605 PF08543 Phosphomethylpyrimidine kinase A5904_RS13615 PF00106 short chain dehydrogenase A5904_RS13625 PF01618 MotA/TolQ/ExbB proton channel family A5904_RS13630 PF02472 Biopolymer transport protein ExbD/TolR A5904_RS13650 PF00962 Adenosine/AMP deaminase A5904_RS13655 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS13655 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS13655 PF01610 Transposase A5904_RS13700 PF00665 Integrase core domain A5904_RS13725 PF00872 Transposase, Mutator family A5904_RS13740 PF01610 Transposase A5904_RS13740 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS13740 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS13755 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A5904_RS13755 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A5904_RS13760 PF00111 2Fe-2S iron-sulfur cluster binding domain A5904_RS13760 PF01799 [2Fe-2S] binding domain A5904_RS13770 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS13770 PF01610 Transposase A5904_RS13770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS13780 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) A5904_RS13795 PF01425 Amidase A5904_RS13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A5904_RS13815 PF03466 LysR substrate binding domain A5904_RS13845 PF00717 Peptidase S24-like A5904_RS13860 PF00589 Phage integrase family A5904_RS13860 PF02899 Phage integrase, N-terminal SAM-like domain A5904_RS13865 PF00216 Bacterial DNA-binding protein A5904_RS13875 PF00216 Bacterial DNA-binding protein A5904_RS13885 PF00216 Bacterial DNA-binding protein A5904_RS13895 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A5904_RS13955 PF00580 UvrD/REP helicase N-terminal domain A5904_RS13955 PF13361 UvrD-like helicase C-terminal domain A5904_RS13970 PF00270 DEAD/DEAH box helicase A5904_RS13970 PF00271 Helicase conserved C-terminal domain A5904_RS13970 PF17191 RecG wedge domain A5904_RS14020 PF01695 IstB-like ATP binding protein A5904_RS14025 PF00665 Integrase core domain A5904_RS14030 PF00665 Integrase core domain A5904_RS14035 PF01695 IstB-like ATP binding protein A5904_RS14040 PF05598 Transposase domain (DUF772) A5904_RS14040 PF01609 Transposase DDE domain A5904_RS14050 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS14050 PF01610 Transposase A5904_RS14050 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS14070 PF01464 Transglycosylase SLT domain A5904_RS14075 PF01471 Putative peptidoglycan binding domain A5904_RS14075 PF01476 LysM domain A5904_RS14075 PF01510 N-acetylmuramoyl-L-alanine amidase A5904_RS14120 PF02272 DHHA1 domain A5904_RS14120 PF17768 RecJ OB domain A5904_RS14120 PF01368 DHH family A5904_RS14135 PF01653 NAD-dependent DNA ligase adenylation domain A5904_RS14135 PF03120 NAD-dependent DNA ligase OB-fold domain A5904_RS14135 PF00533 BRCA1 C Terminus (BRCT) domain A5904_RS14175 PF00986 DNA gyrase B subunit, carboxyl terminus A5904_RS14175 PF18053 DNA gyrase B subunit insert domain A5904_RS14175 PF01751 Toprim domain A5904_RS14175 PF00204 DNA gyrase B A5904_RS14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A5904_RS14185 PF00521 DNA gyrase/topoisomerase IV, subunit A A5904_RS14185 PF03989 DNA gyrase C-terminal domain, beta-propeller A5904_RS14195 PF00436 Single-strand binding protein family A5904_RS14270 PF02899 Phage integrase, N-terminal SAM-like domain A5904_RS14270 PF00589 Phage integrase family A5904_RS14305 PF02472 Biopolymer transport protein ExbD/TolR A5904_RS14310 PF01618 MotA/TolQ/ExbB proton channel family A5904_RS14325 PF01695 IstB-like ATP binding protein A5904_RS14330 PF00665 Integrase core domain A5904_RS14340 PF00271 Helicase conserved C-terminal domain A5904_RS14340 PF09369 Domain of unknown function (DUF1998) A5904_RS14340 PF00270 DEAD/DEAH box helicase A5904_RS14345 PF00176 SNF2 family N-terminal domain A5904_RS14345 PF00271 Helicase conserved C-terminal domain A5904_RS14400 PF00216 Bacterial DNA-binding protein A5904_RS14450 PF01695 IstB-like ATP binding protein A5904_RS14455 PF00665 Integrase core domain A5904_RS14455 PF02796 Helix-turn-helix domain of resolvase A5904_RS14460 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A5904_RS14505 PF00483 Nucleotidyl transferase A5904_RS14510 PF03552 Cellulose synthase A5904_RS14510 PF00535 Glycosyl transferase family 2 A5904_RS14510 PF07238 PilZ domain A5904_RS14620 PF02861 Clp amino terminal domain, pathogenicity island component A5904_RS14620 PF17871 AAA lid domain A5904_RS14620 PF07724 AAA domain (Cdc48 subfamily) A5904_RS14620 PF10431 C-terminal, D2-small domain, of ClpB protein A5904_RS14620 PF00004 ATPase family associated with various cellular activities (AAA) A5904_RS14655 PF09722 Protein of unknown function (DUF2384) A5904_RS14660 PF13173 AAA domain A5904_RS14660 PF13635 Domain of unknown function (DUF4143) A5904_RS14675 PF13614 AAA domain A5904_RS14680 PF17762 HTH domain found in ParB protein A5904_RS14680 PF02195 ParB-like nuclease domain A5904_RS14690 PF00268 Ribonucleotide reductase, small chain A5904_RS14790 PF00216 Bacterial DNA-binding protein A5904_RS14895 PF01610 Transposase A5904_RS14895 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS14895 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS14910 PF01610 Transposase A5904_RS14910 PF13542 Helix-turn-helix domain of transposase family ISL3 A5904_RS14910 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 A5904_RS14990 PF00392 Bacterial regulatory proteins, gntR family A5904_RS14990 PF07702 UTRA domain A5904_RS14995 PF00239 Resolvase, N terminal domain A5904_RS14995 PF02796 Helix-turn-helix domain of resolvase A5904_RS15020 PF13614 AAA domain A5904_RS15035 PF01526 Tn3 transposase DDE domain A5904_RS15035 PF13700 Domain of unknown function (DUF4158)