locus-tag class description AFERRID_RS00020 PF13438 Domain of unknown function (DUF4113) AFERRID_RS00020 PF00817 impB/mucB/samB family AFERRID_RS00020 PF11799 impB/mucB/samB family C-terminal domain AFERRID_RS00020 PF11798 IMS family HHH motif AFERRID_RS00065 PF00873 AcrB/AcrD/AcrF family AFERRID_RS00070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFERRID_RS00105 PF00266 Aminotransferase class-V AFERRID_RS00120 PF01545 Cation efflux family AFERRID_RS00125 PF13411 MerR HTH family regulatory protein AFERRID_RS00130 PF00550 Phosphopantetheine attachment site AFERRID_RS00145 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AFERRID_RS00150 PF05101 Type IV secretory pathway, VirB3-like protein AFERRID_RS00155 PF04956 TrbC/VIRB2 family AFERRID_RS00165 PF00437 Type II/IV secretion system protein AFERRID_RS00195 PF01751 Toprim domain AFERRID_RS00195 PF01131 DNA topoisomerase AFERRID_RS00195 PF01396 Topoisomerase DNA binding C4 zinc finger AFERRID_RS00225 PF03895 YadA-like membrane anchor domain AFERRID_RS00225 PF05658 Head domain of trimeric autotransporter adhesin AFERRID_RS00225 PF05662 Coiled stalk of trimeric autotransporter adhesin AFERRID_RS00230 PF10502 Signal peptidase, peptidase S26 AFERRID_RS00235 PF02534 Type IV secretory system Conjugative DNA transfer AFERRID_RS00255 PF18818 Metallopeptidase superfamily domain AFERRID_RS00255 PF13362 Toprim domain AFERRID_RS00255 PF08401 Domain of unknown function (DUF1738) AFERRID_RS00275 PF13520 Amino acid permease AFERRID_RS00280 PF00871 Acetokinase family AFERRID_RS00285 PF09363 XFP C-terminal domain AFERRID_RS00285 PF09364 XFP N-terminal domain AFERRID_RS00285 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AFERRID_RS00300 PF11154 Protein of unknown function (DUF2934) AFERRID_RS00300 PF00430 ATP synthase B/B' CF(0) AFERRID_RS00310 PF03976 Polyphosphate kinase 2 (PPK2) AFERRID_RS00330 PF02780 Transketolase, C-terminal domain AFERRID_RS00330 PF02779 Transketolase, pyrimidine binding domain AFERRID_RS00330 PF00456 Transketolase, thiamine diphosphate binding domain AFERRID_RS00335 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AFERRID_RS00335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFERRID_RS00340 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AFERRID_RS00340 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AFERRID_RS00345 PF00723 Glycosyl hydrolases family 15 AFERRID_RS00355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AFERRID_RS00360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFERRID_RS00365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFERRID_RS00365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFERRID_RS00375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AFERRID_RS00375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AFERRID_RS00375 PF10531 SLBB domain AFERRID_RS00380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AFERRID_RS00380 PF00384 Molybdopterin oxidoreductase AFERRID_RS00380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFERRID_RS00385 PF00146 NADH dehydrogenase AFERRID_RS00390 PF12838 4Fe-4S dicluster domain AFERRID_RS00395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AFERRID_RS00400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AFERRID_RS00405 PF00361 Proton-conducting membrane transporter AFERRID_RS00405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFERRID_RS00410 PF00361 Proton-conducting membrane transporter AFERRID_RS00415 PF00361 Proton-conducting membrane transporter AFERRID_RS00440 PF00732 GMC oxidoreductase AFERRID_RS00440 PF05199 GMC oxidoreductase AFERRID_RS00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS00450 PF03466 LysR substrate binding domain AFERRID_RS00455 PF00654 Voltage gated chloride channel AFERRID_RS00470 PF07690 Major Facilitator Superfamily AFERRID_RS00485 PF00654 Voltage gated chloride channel AFERRID_RS00540 PF00282 Pyridoxal-dependent decarboxylase conserved domain AFERRID_RS00565 PF04403 Paraquat-inducible protein A AFERRID_RS00590 PF00462 Glutaredoxin AFERRID_RS00595 PF00403 Heavy-metal-associated domain AFERRID_RS00605 PF00403 Heavy-metal-associated domain AFERRID_RS00640 PF00589 Phage integrase family AFERRID_RS00665 PF18821 Large polyvalent protein-associated domain 7 AFERRID_RS00665 PF03432 Relaxase/Mobilisation nuclease domain AFERRID_RS00675 PF10548 P22AR C-terminal domain AFERRID_RS00675 PF08346 AntA/AntB antirepressor AFERRID_RS00715 PF03887 YfbU domain AFERRID_RS00725 PF00145 C-5 cytosine-specific DNA methylase AFERRID_RS00775 PF00717 Peptidase S24-like AFERRID_RS00775 PF01381 Helix-turn-helix AFERRID_RS00790 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AFERRID_RS00795 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AFERRID_RS00805 PF00521 DNA gyrase/topoisomerase IV, subunit A AFERRID_RS00810 PF00986 DNA gyrase B subunit, carboxyl terminus AFERRID_RS00810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS00810 PF01751 Toprim domain AFERRID_RS00810 PF00204 DNA gyrase B AFERRID_RS00815 PF08521 Two-component sensor kinase N-terminal AFERRID_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS00815 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS00820 PF00486 Transcriptional regulatory protein, C terminal AFERRID_RS00820 PF00072 Response regulator receiver domain AFERRID_RS00835 PF00873 AcrB/AcrD/AcrF family AFERRID_RS00860 PF00486 Transcriptional regulatory protein, C terminal AFERRID_RS00860 PF00072 Response regulator receiver domain AFERRID_RS00910 PF05567 Neisseria PilC beta-propeller domain AFERRID_RS00920 PF07963 Prokaryotic N-terminal methylation motif AFERRID_RS00930 PF00482 Type II secretion system (T2SS), protein F AFERRID_RS00945 PF00114 Pilin (bacterial filament) AFERRID_RS00945 PF07963 Prokaryotic N-terminal methylation motif AFERRID_RS00990 PF01695 IstB-like ATP binding protein AFERRID_RS01000 PF01381 Helix-turn-helix AFERRID_RS01015 PF02355 Protein export membrane protein AFERRID_RS01015 PF07549 SecD/SecF GG Motif AFERRID_RS01020 PF07549 SecD/SecF GG Motif AFERRID_RS01020 PF02355 Protein export membrane protein AFERRID_RS01020 PF13721 SecD export protein N-terminal TM region AFERRID_RS01025 PF02699 Preprotein translocase subunit AFERRID_RS01030 PF01702 Queuine tRNA-ribosyltransferase AFERRID_RS01035 PF02547 Queuosine biosynthesis protein AFERRID_RS01040 PF01595 Cyclin M transmembrane N-terminal domain AFERRID_RS01040 PF00571 CBS domain AFERRID_RS01040 PF03471 Transporter associated domain AFERRID_RS01050 PF01053 Cys/Met metabolism PLP-dependent enzyme AFERRID_RS01065 PF02875 Mur ligase family, glutamate ligase domain AFERRID_RS01065 PF08245 Mur ligase middle domain AFERRID_RS01070 PF17848 Acetyl-coA carboxylase zinc finger domain AFERRID_RS01070 PF01039 Carboxyl transferase domain AFERRID_RS01075 PF00290 Tryptophan synthase alpha chain AFERRID_RS01080 PF00291 Pyridoxal-phosphate dependent enzyme AFERRID_RS01090 PF01416 tRNA pseudouridine synthase AFERRID_RS01100 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFERRID_RS01100 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFERRID_RS01105 PF00180 Isocitrate/isopropylmalate dehydrogenase AFERRID_RS01110 PF12804 MobA-like NTP transferase domain AFERRID_RS01115 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AFERRID_RS01120 PF03453 MoeA N-terminal region (domain I and II) AFERRID_RS01120 PF03454 MoeA C-terminal region (domain IV) AFERRID_RS01120 PF00994 Probable molybdopterin binding domain AFERRID_RS01125 PF13091 PLD-like domain AFERRID_RS01130 PF01343 Peptidase family S49 AFERRID_RS01140 PF00156 Phosphoribosyl transferase domain AFERRID_RS01140 PF01738 Dienelactone hydrolase family AFERRID_RS01145 PF00011 Hsp20/alpha crystallin family AFERRID_RS01150 PF08240 Alcohol dehydrogenase GroES-like domain AFERRID_RS01165 PF07690 Major Facilitator Superfamily AFERRID_RS01210 PF13847 Methyltransferase domain AFERRID_RS01225 PF02637 GatB domain AFERRID_RS01225 PF02934 GatB/GatE catalytic domain AFERRID_RS01230 PF01425 Amidase AFERRID_RS01235 PF02686 Glu-tRNAGln amidotransferase C subunit AFERRID_RS01250 PF06463 Molybdenum Cofactor Synthesis C AFERRID_RS01250 PF04055 Radical SAM superfamily AFERRID_RS01270 PF04794 YdjC-like protein AFERRID_RS01285 PF01370 NAD dependent epimerase/dehydratase family AFERRID_RS01290 PF01048 Phosphorylase superfamily AFERRID_RS01295 PF13249 Squalene-hopene cyclase N-terminal domain AFERRID_RS01295 PF13243 Squalene-hopene cyclase C-terminal domain AFERRID_RS01305 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AFERRID_RS01305 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AFERRID_RS01310 PF02556 Preprotein translocase subunit SecB AFERRID_RS01325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFERRID_RS01325 PF04073 Aminoacyl-tRNA editing domain AFERRID_RS01325 PF03129 Anticodon binding domain AFERRID_RS01330 PF00582 Universal stress protein family AFERRID_RS01360 PF13277 YmdB-like protein AFERRID_RS01365 PF01812 5-formyltetrahydrofolate cyclo-ligase family AFERRID_RS01385 PF03717 Penicillin-binding Protein dimerisation domain AFERRID_RS01385 PF00905 Penicillin binding protein transpeptidase domain AFERRID_RS01390 PF14693 Ribosomal protein TL5, C-terminal domain AFERRID_RS01390 PF01386 Ribosomal L25p family AFERRID_RS01395 PF01195 Peptidyl-tRNA hydrolase AFERRID_RS01400 PF01926 50S ribosome-binding GTPase AFERRID_RS01400 PF06071 Protein of unknown function (DUF933) AFERRID_RS01405 PF01381 Helix-turn-helix AFERRID_RS01405 PF07883 Cupin domain AFERRID_RS01425 PF00146 NADH dehydrogenase AFERRID_RS01435 PF00361 Proton-conducting membrane transporter AFERRID_RS01440 PF00374 Nickel-dependent hydrogenase AFERRID_RS01440 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFERRID_RS01440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFERRID_RS01445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFERRID_RS01450 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFERRID_RS01450 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFERRID_RS01455 PF08406 CbbQ/NirQ/NorQ C-terminal AFERRID_RS01455 PF07728 AAA domain (dynein-related subfamily) AFERRID_RS01460 PF00092 von Willebrand factor type A domain AFERRID_RS01465 PF03466 LysR substrate binding domain AFERRID_RS01465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS01470 PF08274 PhnA Zinc-Ribbon AFERRID_RS01470 PF03831 PhnA domain AFERRID_RS01480 PF14883 Hypothetical glycosyl hydrolase family 13 AFERRID_RS01480 PF01522 Polysaccharide deacetylase AFERRID_RS01490 PF00144 Beta-lactamase AFERRID_RS01495 PF00293 NUDIX domain AFERRID_RS01500 PF00293 NUDIX domain AFERRID_RS01505 PF00849 RNA pseudouridylate synthase AFERRID_RS01505 PF01479 S4 domain AFERRID_RS01510 PF04371 Porphyromonas-type peptidyl-arginine deiminase AFERRID_RS01515 PF01568 Molydopterin dinucleotide binding domain AFERRID_RS01515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFERRID_RS01515 PF00384 Molybdopterin oxidoreductase AFERRID_RS01520 PF13247 4Fe-4S dicluster domain AFERRID_RS01540 PF01790 Prolipoprotein diacylglyceryl transferase AFERRID_RS01545 PF13361 UvrD-like helicase C-terminal domain AFERRID_RS01545 PF00580 UvrD/REP helicase N-terminal domain AFERRID_RS01550 PF01649 Ribosomal protein S20 AFERRID_RS01555 PF08402 TOBE domain AFERRID_RS01555 PF00005 ABC transporter AFERRID_RS01560 PF00528 Binding-protein-dependent transport system inner membrane component AFERRID_RS01570 PF00149 Calcineurin-like phosphoesterase AFERRID_RS01575 PF00270 DEAD/DEAH box helicase AFERRID_RS01575 PF00570 HRDC domain AFERRID_RS01575 PF16124 RecQ zinc-binding AFERRID_RS01575 PF00271 Helicase conserved C-terminal domain AFERRID_RS01575 PF09382 RQC domain AFERRID_RS01580 PF01491 Frataxin-like domain AFERRID_RS01600 PF03739 Lipopolysaccharide export system permease LptF/LptG AFERRID_RS01605 PF02789 Cytosol aminopeptidase family, N-terminal domain AFERRID_RS01605 PF00883 Cytosol aminopeptidase family, catalytic domain AFERRID_RS01620 PF00133 tRNA synthetases class I (I, L, M and V) AFERRID_RS01620 PF08264 Anticodon-binding domain of tRNA AFERRID_RS01620 PF10458 Valyl tRNA synthetase tRNA binding arm AFERRID_RS01625 PF06965 Na+/H+ antiporter 1 AFERRID_RS01630 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AFERRID_RS01630 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AFERRID_RS01640 PF16925 Tetracyclin repressor-like, C-terminal domain AFERRID_RS01640 PF00440 Bacterial regulatory proteins, tetR family AFERRID_RS01645 PF01738 Dienelactone hydrolase family AFERRID_RS01650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFERRID_RS01665 PF05656 Protein of unknown function (DUF805) AFERRID_RS01685 PF13419 Haloacid dehalogenase-like hydrolase AFERRID_RS01690 PF00849 RNA pseudouridylate synthase AFERRID_RS01690 PF01479 S4 domain AFERRID_RS01695 PF10150 Ribonuclease E/G family AFERRID_RS01695 PF12111 Polyribonucleotide phosphorylase C terminal AFERRID_RS01695 PF00575 S1 RNA binding domain AFERRID_RS01700 PF09190 DALR domain AFERRID_RS01700 PF01406 tRNA synthetases class I (C) catalytic domain AFERRID_RS01705 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFERRID_RS01725 PF13419 Haloacid dehalogenase-like hydrolase AFERRID_RS01730 PF00486 Transcriptional regulatory protein, C terminal AFERRID_RS01730 PF00072 Response regulator receiver domain AFERRID_RS01745 PF03814 Potassium-transporting ATPase A subunit AFERRID_RS01755 PF02669 K+-transporting ATPase, c chain AFERRID_RS01760 PF00521 DNA gyrase/topoisomerase IV, subunit A AFERRID_RS01760 PF03989 DNA gyrase C-terminal domain, beta-propeller AFERRID_RS01770 PF01472 PUA domain AFERRID_RS01770 PF00696 Amino acid kinase family AFERRID_RS01785 PF00999 Sodium/hydrogen exchanger family AFERRID_RS01830 PF01925 Sulfite exporter TauE/SafE AFERRID_RS01840 PF02142 MGS-like domain AFERRID_RS01840 PF01808 AICARFT/IMPCHase bienzyme AFERRID_RS01845 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AFERRID_RS01845 PF02844 Phosphoribosylglycinamide synthetase, N domain AFERRID_RS01845 PF02843 Phosphoribosylglycinamide synthetase, C domain AFERRID_RS01850 PF01300 Telomere recombination AFERRID_RS01855 PF01218 Coproporphyrinogen III oxidase AFERRID_RS01860 PF01180 Dihydroorotate dehydrogenase AFERRID_RS01870 PF04185 Phosphoesterase family AFERRID_RS01880 PF02472 Biopolymer transport protein ExbD/TolR AFERRID_RS01885 PF01618 MotA/TolQ/ExbB proton channel family AFERRID_RS01925 PF00083 Sugar (and other) transporter AFERRID_RS01930 PF00300 Histidine phosphatase superfamily (branch 1) AFERRID_RS01945 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS01945 PF00672 HAMP domain AFERRID_RS01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS01950 PF00486 Transcriptional regulatory protein, C terminal AFERRID_RS01950 PF00072 Response regulator receiver domain AFERRID_RS01955 PF00929 Exonuclease AFERRID_RS01960 PF00296 Luciferase-like monooxygenase AFERRID_RS01975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFERRID_RS01975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFERRID_RS01975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFERRID_RS01975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFERRID_RS01990 PF00690 Cation transporter/ATPase, N-terminus AFERRID_RS01990 PF00689 Cation transporting ATPase, C-terminus AFERRID_RS02000 PF01292 Prokaryotic cytochrome b561 AFERRID_RS02010 PF07690 Major Facilitator Superfamily AFERRID_RS02015 PF03466 LysR substrate binding domain AFERRID_RS02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS02025 PF04542 Sigma-70 region 2 AFERRID_RS02025 PF04539 Sigma-70 region 3 AFERRID_RS02025 PF03979 Sigma-70 factor, region 1.1 AFERRID_RS02025 PF04546 Sigma-70, non-essential region AFERRID_RS02025 PF00140 Sigma-70 factor, region 1.2 AFERRID_RS02025 PF04545 Sigma-70, region 4 AFERRID_RS02030 PF10410 DnaB-helicase binding domain of primase AFERRID_RS02030 PF08278 DNA primase DnaG DnaB-binding AFERRID_RS02030 PF08275 DNA primase catalytic core, N-terminal domain AFERRID_RS02030 PF01807 CHC2 zinc finger AFERRID_RS02035 PF00488 MutS domain V AFERRID_RS02035 PF01713 Smr domain AFERRID_RS02045 PF01165 Ribosomal protein S21 AFERRID_RS02055 PF00140 Sigma-70 factor, region 1.2 AFERRID_RS02055 PF04545 Sigma-70, region 4 AFERRID_RS02055 PF04539 Sigma-70 region 3 AFERRID_RS02055 PF04542 Sigma-70 region 2 AFERRID_RS02060 PF01725 Ham1 family AFERRID_RS02065 PF03725 3' exoribonuclease family, domain 2 AFERRID_RS02065 PF01138 3' exoribonuclease family, domain 1 AFERRID_RS02080 PF06969 HemN C-terminal domain AFERRID_RS02080 PF04055 Radical SAM superfamily AFERRID_RS02090 PF00849 RNA pseudouridylate synthase AFERRID_RS02090 PF01479 S4 domain AFERRID_RS02095 PF07690 Major Facilitator Superfamily AFERRID_RS02100 PF00768 D-alanyl-D-alanine carboxypeptidase AFERRID_RS02100 PF07943 Penicillin-binding protein 5, C-terminal domain AFERRID_RS02110 PF08241 Methyltransferase domain AFERRID_RS02125 PF01850 PIN domain AFERRID_RS02130 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AFERRID_RS02130 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AFERRID_RS02130 PF02769 AIR synthase related protein, C-terminal domain AFERRID_RS02135 PF01259 SAICAR synthetase AFERRID_RS02140 PF00206 Lyase AFERRID_RS02140 PF10397 Adenylosuccinate lyase C-terminus AFERRID_RS02150 PF00701 Dihydrodipicolinate synthetase family AFERRID_RS02160 PF03006 Haemolysin-III related AFERRID_RS02165 PF11741 AMIN domain AFERRID_RS02165 PF01520 N-acetylmuramoyl-L-alanine amidase AFERRID_RS02170 PF00085 Thioredoxin AFERRID_RS02175 PF00462 Glutaredoxin AFERRID_RS02180 PF00581 Rhodanese-like domain AFERRID_RS02190 PF00873 AcrB/AcrD/AcrF family AFERRID_RS02195 PF13533 Biotin-lipoyl like AFERRID_RS02205 PF01022 Bacterial regulatory protein, arsR family AFERRID_RS02215 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AFERRID_RS02230 PF00899 ThiF family AFERRID_RS02235 PF01026 TatD related DNase AFERRID_RS02240 PF01494 FAD binding domain AFERRID_RS02245 PF01494 FAD binding domain AFERRID_RS02250 PF04380 Membrane fusogenic activity AFERRID_RS02260 PF02899 Phage integrase, N-terminal SAM-like domain AFERRID_RS02260 PF00589 Phage integrase family AFERRID_RS02275 PF01541 GIY-YIG catalytic domain AFERRID_RS02310 PF16363 GDP-mannose 4,6 dehydratase AFERRID_RS02315 PF14667 Polysaccharide biosynthesis C-terminal domain AFERRID_RS02315 PF01943 Polysaccharide biosynthesis protein AFERRID_RS02330 PF00535 Glycosyl transferase family 2 AFERRID_RS02355 PF02397 Bacterial sugar transferase AFERRID_RS02390 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS02390 PF16658 Class II release factor RF3, C-terminal domain AFERRID_RS02390 PF03144 Elongation factor Tu domain 2 AFERRID_RS02400 PF00814 Glycoprotease family AFERRID_RS02405 PF13307 Helicase C-terminal domain AFERRID_RS02405 PF04851 Type III restriction enzyme, res subunit AFERRID_RS02420 PF00877 NlpC/P60 family AFERRID_RS02435 PF02421 Ferrous iron transport protein B AFERRID_RS02435 PF07664 Ferrous iron transport protein B C terminus AFERRID_RS02435 PF07670 Nucleoside recognition AFERRID_RS02435 PF17910 FeoB cytosolic helical domain AFERRID_RS02445 PF00795 Carbon-nitrogen hydrolase AFERRID_RS02450 PF07722 Peptidase C26 AFERRID_RS02455 PF09335 SNARE associated Golgi protein AFERRID_RS02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS02470 PF03466 LysR substrate binding domain AFERRID_RS02485 PF00850 Histone deacetylase domain AFERRID_RS02495 PF08406 CbbQ/NirQ/NorQ C-terminal AFERRID_RS02495 PF07728 AAA domain (dynein-related subfamily) AFERRID_RS02540 PF03099 Biotin/lipoate A/B protein ligase family AFERRID_RS02550 PF01597 Glycine cleavage H-protein AFERRID_RS02560 PF01597 Glycine cleavage H-protein AFERRID_RS02565 PF02754 Cysteine-rich domain AFERRID_RS02580 PF01593 Flavin containing amine oxidoreductase AFERRID_RS02595 PF13686 DsrE/DsrF/DrsH-like family AFERRID_RS02600 PF01206 Sulfurtransferase TusA AFERRID_RS02605 PF00581 Rhodanese-like domain AFERRID_RS02610 PF04055 Radical SAM superfamily AFERRID_RS02610 PF06463 Molybdenum Cofactor Synthesis C AFERRID_RS02620 PF01967 MoaC family AFERRID_RS02630 PF04085 rod shape-determining protein MreC AFERRID_RS02640 PF03717 Penicillin-binding Protein dimerisation domain AFERRID_RS02640 PF00905 Penicillin binding protein transpeptidase domain AFERRID_RS02645 PF01098 Cell cycle protein AFERRID_RS02650 PF07943 Penicillin-binding protein 5, C-terminal domain AFERRID_RS02650 PF00768 D-alanyl-D-alanine carboxypeptidase AFERRID_RS02660 PF03099 Biotin/lipoate A/B protein ligase family AFERRID_RS02665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AFERRID_RS02665 PF04055 Radical SAM superfamily AFERRID_RS02710 PF02091 Glycyl-tRNA synthetase alpha subunit AFERRID_RS02715 PF02092 Glycyl-tRNA synthetase beta subunit AFERRID_RS02730 PF08443 RimK-like ATP-grasp domain AFERRID_RS02730 PF18030 RimK PreATP-grasp domain AFERRID_RS02750 PF02677 Epoxyqueuosine reductase QueH AFERRID_RS02760 PF01510 N-acetylmuramoyl-L-alanine amidase AFERRID_RS02780 PF02798 Glutathione S-transferase, N-terminal domain AFERRID_RS02780 PF00043 Glutathione S-transferase, C-terminal domain AFERRID_RS02785 PF01638 HxlR-like helix-turn-helix AFERRID_RS02790 PF00682 HMGL-like AFERRID_RS02790 PF08502 LeuA allosteric (dimerisation) domain AFERRID_RS02795 PF01590 GAF domain AFERRID_RS02795 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS02795 PF00158 Sigma-54 interaction domain AFERRID_RS02840 PF00216 Bacterial DNA-binding protein AFERRID_RS02845 PF03483 B3/4 domain AFERRID_RS02845 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AFERRID_RS02845 PF01588 Putative tRNA binding domain AFERRID_RS02845 PF03484 tRNA synthetase B5 domain AFERRID_RS02845 PF03147 Ferredoxin-fold anticodon binding domain AFERRID_RS02850 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AFERRID_RS02850 PF01409 tRNA synthetases class II core domain (F) AFERRID_RS02855 PF00453 Ribosomal protein L20 AFERRID_RS02860 PF01632 Ribosomal protein L35 AFERRID_RS02865 PF00707 Translation initiation factor IF-3, C-terminal domain AFERRID_RS02865 PF05198 Translation initiation factor IF-3, N-terminal domain AFERRID_RS02870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFERRID_RS02870 PF02824 TGS domain AFERRID_RS02870 PF03129 Anticodon binding domain AFERRID_RS02870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFERRID_RS02880 PF00361 Proton-conducting membrane transporter AFERRID_RS02885 PF00361 Proton-conducting membrane transporter AFERRID_RS02885 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AFERRID_RS02890 PF00361 Proton-conducting membrane transporter AFERRID_RS02890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFERRID_RS02895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AFERRID_RS02900 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AFERRID_RS02905 PF12838 4Fe-4S dicluster domain AFERRID_RS02910 PF00146 NADH dehydrogenase AFERRID_RS02915 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AFERRID_RS02915 PF00384 Molybdopterin oxidoreductase AFERRID_RS02915 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AFERRID_RS02930 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFERRID_RS02935 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFERRID_RS02940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFERRID_RS02945 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AFERRID_RS02955 PF03840 Preprotein translocase SecG subunit AFERRID_RS02965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFERRID_RS02965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFERRID_RS02965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFERRID_RS02965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFERRID_RS02970 PF00809 Pterin binding enzyme AFERRID_RS02975 PF17862 AAA+ lid domain AFERRID_RS02975 PF00004 ATPase family associated with various cellular activities (AAA) AFERRID_RS02975 PF01434 Peptidase family M41 AFERRID_RS02975 PF06480 FtsH Extracellular AFERRID_RS02980 PF01523 Putative modulator of DNA gyrase AFERRID_RS02985 PF02867 Ribonucleotide reductase, barrel domain AFERRID_RS02985 PF00317 Ribonucleotide reductase, all-alpha domain AFERRID_RS02985 PF03477 ATP cone domain AFERRID_RS02990 PF00268 Ribonucleotide reductase, small chain AFERRID_RS03050 PF01965 DJ-1/PfpI family AFERRID_RS03070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFERRID_RS03080 PF01548 Transposase AFERRID_RS03080 PF02371 Transposase IS116/IS110/IS902 family AFERRID_RS03110 PF00692 dUTPase AFERRID_RS03115 PF10609 NUBPL iron-transfer P-loop NTPase AFERRID_RS03125 PF01113 Dihydrodipicolinate reductase, N-terminus AFERRID_RS03125 PF05173 Dihydrodipicolinate reductase, C-terminus AFERRID_RS03130 PF00226 DnaJ domain AFERRID_RS03130 PF01556 DnaJ C terminal domain AFERRID_RS03130 PF00684 DnaJ central domain AFERRID_RS03135 PF00012 Hsp70 protein AFERRID_RS03140 PF01025 GrpE AFERRID_RS03150 PF00471 Ribosomal protein L33 AFERRID_RS03155 PF00830 Ribosomal L28 family AFERRID_RS03160 PF09334 tRNA synthetases class I (M) AFERRID_RS03160 PF01588 Putative tRNA binding domain AFERRID_RS03165 PF18152 DAHP synthase ferredoxin-like domain AFERRID_RS03165 PF00793 DAHP synthetase I family AFERRID_RS03170 PF00206 Lyase AFERRID_RS03170 PF10415 Fumarase C C-terminus AFERRID_RS03175 PF01432 Peptidase family M3 AFERRID_RS03175 PF08439 Oligopeptidase F AFERRID_RS03195 PF08323 Starch synthase catalytic domain AFERRID_RS03195 PF00534 Glycosyl transferases group 1 AFERRID_RS03200 PF10996 Beta-Casp domain AFERRID_RS03200 PF00753 Metallo-beta-lactamase superfamily AFERRID_RS03200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AFERRID_RS03210 PF10576 Iron-sulfur binding domain of endonuclease III AFERRID_RS03210 PF00633 Helix-hairpin-helix motif AFERRID_RS03210 PF00730 HhH-GPD superfamily base excision DNA repair protein AFERRID_RS03240 PF13533 Biotin-lipoyl like AFERRID_RS03245 PF00005 ABC transporter AFERRID_RS03245 PF00664 ABC transporter transmembrane region AFERRID_RS03245 PF03412 Peptidase C39 family AFERRID_RS03255 PF00158 Sigma-54 interaction domain AFERRID_RS03255 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS03255 PF00072 Response regulator receiver domain AFERRID_RS03295 PF13629 Pilus formation protein N terminal region AFERRID_RS03295 PF04972 BON domain AFERRID_RS03295 PF00263 Bacterial type II and III secretion system protein AFERRID_RS03350 PF13181 Tetratricopeptide repeat AFERRID_RS03380 PF01136 Peptidase family U32 AFERRID_RS03385 PF01136 Peptidase family U32 AFERRID_RS03405 PF00034 Cytochrome c AFERRID_RS03415 PF00355 Rieske [2Fe-2S] domain AFERRID_RS03415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AFERRID_RS03420 PF00032 Cytochrome b(C-terminal)/b6/petD AFERRID_RS03420 PF00033 Cytochrome b/b6/petB AFERRID_RS03425 PF02167 Cytochrome C1 family AFERRID_RS03450 PF01728 FtsJ-like methyltransferase AFERRID_RS03455 PF01985 CRS1 / YhbY (CRM) domain AFERRID_RS03460 PF04379 ApaG domain AFERRID_RS03465 PF01209 ubiE/COQ5 methyltransferase family AFERRID_RS03470 PF00679 Elongation factor G C-terminus AFERRID_RS03470 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS03470 PF03144 Elongation factor Tu domain 2 AFERRID_RS03485 PF01678 Diaminopimelate epimerase AFERRID_RS03495 PF00589 Phage integrase family AFERRID_RS03495 PF02899 Phage integrase, N-terminal SAM-like domain AFERRID_RS03500 PF00227 Proteasome subunit AFERRID_RS03505 PF07724 AAA domain (Cdc48 subfamily) AFERRID_RS03505 PF00004 ATPase family associated with various cellular activities (AAA) AFERRID_RS03515 PF00140 Sigma-70 factor, region 1.2 AFERRID_RS03515 PF04542 Sigma-70 region 2 AFERRID_RS03515 PF04545 Sigma-70, region 4 AFERRID_RS03520 PF18075 FtsX extracellular domain AFERRID_RS03525 PF00005 ABC transporter AFERRID_RS03530 PF02881 SRP54-type protein, helical bundle domain AFERRID_RS03530 PF00448 SRP54-type protein, GTPase domain AFERRID_RS03540 PF01467 Cytidylyltransferase-like AFERRID_RS03545 PF00037 4Fe-4S binding domain AFERRID_RS03550 PF00350 Dynamin family AFERRID_RS03555 PF06827 Zinc finger found in FPG and IleRS AFERRID_RS03555 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFERRID_RS03555 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFERRID_RS03560 PF05175 Methyltransferase small domain AFERRID_RS03560 PF17827 PrmC N-terminal domain AFERRID_RS03565 PF00472 RF-1 domain AFERRID_RS03565 PF03462 PCRF domain AFERRID_RS03570 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AFERRID_RS03570 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AFERRID_RS03570 PF01488 Shikimate / quinate 5-dehydrogenase AFERRID_RS03580 PF03550 Outer membrane lipoprotein LolB AFERRID_RS03585 PF00288 GHMP kinases N terminal domain AFERRID_RS03585 PF08544 GHMP kinases C terminal AFERRID_RS03595 PF14572 Phosphoribosyl synthetase-associated domain AFERRID_RS03595 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AFERRID_RS03620 PF03458 UPF0126 domain AFERRID_RS03665 PF00535 Glycosyl transferase family 2 AFERRID_RS03670 PF00483 Nucleotidyl transferase AFERRID_RS03735 PF12804 MobA-like NTP transferase domain AFERRID_RS03745 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFERRID_RS03745 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFERRID_RS03750 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS03750 PF01799 [2Fe-2S] binding domain AFERRID_RS03770 PF02594 Uncharacterised ACR, YggU family COG1872 AFERRID_RS03795 PF00113 Enolase, C-terminal TIM barrel domain AFERRID_RS03795 PF03952 Enolase, N-terminal domain AFERRID_RS03805 PF01381 Helix-turn-helix AFERRID_RS03825 PF06165 Glycosyltransferase family 36 AFERRID_RS03825 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AFERRID_RS03825 PF10091 Putative glucoamylase AFERRID_RS03860 PF05195 Aminopeptidase P, N-terminal domain AFERRID_RS03860 PF00557 Metallopeptidase family M24 AFERRID_RS03870 PF18073 Rubredoxin metal binding domain AFERRID_RS03875 PF01168 Alanine racemase, N-terminal domain AFERRID_RS03875 PF00842 Alanine racemase, C-terminal domain AFERRID_RS03880 PF00772 DnaB-like helicase N terminal domain AFERRID_RS03880 PF03796 DnaB-like helicase C terminal domain AFERRID_RS03885 PF01281 Ribosomal protein L9, N-terminal domain AFERRID_RS03885 PF03948 Ribosomal protein L9, C-terminal domain AFERRID_RS03895 PF01084 Ribosomal protein S18 AFERRID_RS03900 PF01250 Ribosomal protein S6 AFERRID_RS03905 PF00933 Glycosyl hydrolase family 3 N terminal domain AFERRID_RS03910 PF13520 Amino acid permease AFERRID_RS03920 PF05958 tRNA (Uracil-5-)-methyltransferase AFERRID_RS03920 PF01938 TRAM domain AFERRID_RS03940 PF00291 Pyridoxal-phosphate dependent enzyme AFERRID_RS03945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AFERRID_RS03950 PF01145 SPFH domain / Band 7 family AFERRID_RS03960 PF00128 Alpha amylase, catalytic domain AFERRID_RS03960 PF02806 Alpha amylase, C-terminal all-beta domain AFERRID_RS03960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFERRID_RS03965 PF00483 Nucleotidyl transferase AFERRID_RS03975 PF09094 Domain of unknown function (DUF1925) AFERRID_RS03975 PF09095 Domain of unknown function (DUF1926) AFERRID_RS03975 PF03065 Glycosyl hydrolase family 57 AFERRID_RS03980 PF00480 ROK family AFERRID_RS03985 PF01177 Asp/Glu/Hydantoin racemase AFERRID_RS03990 PF04286 Protein of unknown function (DUF445) AFERRID_RS04000 PF00436 Single-strand binding protein family AFERRID_RS04005 PF17760 UvrA interaction domain AFERRID_RS04005 PF17755 UvrA DNA-binding domain AFERRID_RS04015 PF00085 Thioredoxin AFERRID_RS04020 PF13180 PDZ domain AFERRID_RS04025 PF00589 Phage integrase family AFERRID_RS04025 PF02899 Phage integrase, N-terminal SAM-like domain AFERRID_RS04035 PF01245 Ribosomal protein L19 AFERRID_RS04040 PF01746 tRNA (Guanine-1)-methyltransferase AFERRID_RS04045 PF01782 RimM N-terminal domain AFERRID_RS04045 PF05239 PRC-barrel domain AFERRID_RS04050 PF00886 Ribosomal protein S16 AFERRID_RS04055 PF02881 SRP54-type protein, helical bundle domain AFERRID_RS04055 PF00448 SRP54-type protein, GTPase domain AFERRID_RS04055 PF02978 Signal peptide binding domain AFERRID_RS04065 PF02040 Arsenical pump membrane protein AFERRID_RS04075 PF01451 Low molecular weight phosphotyrosine protein phosphatase AFERRID_RS04080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFERRID_RS04085 PF00005 ABC transporter AFERRID_RS04120 PF01597 Glycine cleavage H-protein AFERRID_RS04150 PF13488 Glycine zipper AFERRID_RS04150 PF00691 OmpA family AFERRID_RS04185 PF03958 Bacterial type II/III secretion system short domain AFERRID_RS04185 PF00263 Bacterial type II and III secretion system protein AFERRID_RS04190 PF00437 Type II/IV secretion system protein AFERRID_RS04220 PF03167 Uracil DNA glycosylase superfamily AFERRID_RS04230 PF12848 ABC transporter AFERRID_RS04230 PF16326 ABC transporter C-terminal domain AFERRID_RS04230 PF00005 ABC transporter AFERRID_RS04245 PF03717 Penicillin-binding Protein dimerisation domain AFERRID_RS04245 PF00905 Penicillin binding protein transpeptidase domain AFERRID_RS04265 PF00348 Polyprenyl synthetase AFERRID_RS04275 PF00158 Sigma-54 interaction domain AFERRID_RS04275 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS04275 PF00072 Response regulator receiver domain AFERRID_RS04280 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS04280 PF00989 PAS fold AFERRID_RS04290 PF14403 Circularly permuted ATP-grasp type 2 AFERRID_RS04295 PF04168 A predicted alpha-helical domain with a conserved ER motif. AFERRID_RS04295 PF14403 Circularly permuted ATP-grasp type 2 AFERRID_RS04305 PF06798 PrkA serine protein kinase C-terminal domain AFERRID_RS04305 PF08298 PrkA AAA domain AFERRID_RS04310 PF00909 Ammonium Transporter Family AFERRID_RS04315 PF04285 Protein of unknown function (DUF444) AFERRID_RS04330 PF00543 Nitrogen regulatory protein P-II AFERRID_RS04335 PF00909 Ammonium Transporter Family AFERRID_RS04355 PF05036 Sporulation related domain AFERRID_RS04355 PF03330 Lytic transglycolase AFERRID_RS04365 PF02254 TrkA-N domain AFERRID_RS04365 PF07885 Ion channel AFERRID_RS04370 PF07943 Penicillin-binding protein 5, C-terminal domain AFERRID_RS04370 PF00768 D-alanyl-D-alanine carboxypeptidase AFERRID_RS04375 PF00342 Phosphoglucose isomerase AFERRID_RS04390 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AFERRID_RS04410 PF06736 Protein of unknown function (DUF1211) AFERRID_RS04420 PF12705 PD-(D/E)XK nuclease superfamily AFERRID_RS04420 PF00580 UvrD/REP helicase N-terminal domain AFERRID_RS04420 PF13361 UvrD-like helicase C-terminal domain AFERRID_RS04455 PF00689 Cation transporting ATPase, C-terminus AFERRID_RS04455 PF00690 Cation transporter/ATPase, N-terminus AFERRID_RS04460 PF01641 SelR domain AFERRID_RS04465 PF01625 Peptide methionine sulfoxide reductase AFERRID_RS04475 PF01467 Cytidylyltransferase-like AFERRID_RS04485 PF02590 Predicted SPOUT methyltransferase AFERRID_RS04500 PF02545 Maf-like protein AFERRID_RS04505 PF00575 S1 RNA binding domain AFERRID_RS04505 PF10150 Ribonuclease E/G family AFERRID_RS04510 PF00072 Response regulator receiver domain AFERRID_RS04510 PF00158 Sigma-54 interaction domain AFERRID_RS04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS04520 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS04530 PF04362 Bacterial Fe(2+) trafficking AFERRID_RS04535 PF01050 Mannose-6-phosphate isomerase AFERRID_RS04535 PF00483 Nucleotidyl transferase AFERRID_RS04540 PF02563 Polysaccharide biosynthesis/export protein AFERRID_RS04555 PF01061 ABC-2 type transporter AFERRID_RS04585 PF16363 GDP-mannose 4,6 dehydratase AFERRID_RS04600 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AFERRID_RS04630 PF00005 ABC transporter AFERRID_RS04645 PF13439 Glycosyltransferase Family 4 AFERRID_RS04645 PF00534 Glycosyl transferases group 1 AFERRID_RS04650 PF00664 ABC transporter transmembrane region AFERRID_RS04650 PF00005 ABC transporter AFERRID_RS04655 PF13673 Acetyltransferase (GNAT) domain AFERRID_RS04660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFERRID_RS04675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFERRID_RS04675 PF00005 ABC transporter AFERRID_RS04680 PF00005 ABC transporter AFERRID_RS04680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFERRID_RS04685 PF12911 N-terminal TM domain of oligopeptide transport permease C AFERRID_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component AFERRID_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component AFERRID_RS04715 PF01914 MarC family integral membrane protein AFERRID_RS04720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AFERRID_RS04720 PF00056 lactate/malate dehydrogenase, NAD binding domain AFERRID_RS04735 PF01618 MotA/TolQ/ExbB proton channel family AFERRID_RS04740 PF02472 Biopolymer transport protein ExbD/TolR AFERRID_RS04760 PF08659 KR domain AFERRID_RS04760 PF02801 Beta-ketoacyl synthase, C-terminal domain AFERRID_RS04760 PF00109 Beta-ketoacyl synthase, N-terminal domain AFERRID_RS04760 PF14765 Polyketide synthase dehydratase AFERRID_RS04760 PF08240 Alcohol dehydrogenase GroES-like domain AFERRID_RS04760 PF00698 Acyl transferase domain AFERRID_RS04760 PF00107 Zinc-binding dehydrogenase AFERRID_RS04760 PF16197 Ketoacyl-synthetase C-terminal extension AFERRID_RS04760 PF00550 Phosphopantetheine attachment site AFERRID_RS04765 PF00155 Aminotransferase class I and II AFERRID_RS04770 PF05159 Capsule polysaccharide biosynthesis protein AFERRID_RS04775 PF05159 Capsule polysaccharide biosynthesis protein AFERRID_RS04780 PF00106 short chain dehydrogenase AFERRID_RS04790 PF14815 NUDIX domain AFERRID_RS04790 PF10576 Iron-sulfur binding domain of endonuclease III AFERRID_RS04790 PF00633 Helix-hairpin-helix motif AFERRID_RS04790 PF00730 HhH-GPD superfamily base excision DNA repair protein AFERRID_RS04800 PF00391 PEP-utilising enzyme, mobile domain AFERRID_RS04800 PF05524 PEP-utilising enzyme, N-terminal AFERRID_RS04800 PF02896 PEP-utilising enzyme, TIM barrel domain AFERRID_RS04805 PF00381 PTS HPr component phosphorylation site AFERRID_RS04815 PF03668 P-loop ATPase protein family AFERRID_RS04820 PF07475 HPr Serine kinase C-terminal domain AFERRID_RS04820 PF02603 HPr Serine kinase N terminus AFERRID_RS04825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFERRID_RS04825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFERRID_RS04830 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AFERRID_RS04835 PF04552 Sigma-54, DNA binding domain AFERRID_RS04835 PF00309 Sigma-54 factor, Activator interacting domain (AID) AFERRID_RS04835 PF04963 Sigma-54 factor, core binding domain AFERRID_RS04840 PF00005 ABC transporter AFERRID_RS04845 PF03968 OstA-like protein AFERRID_RS04860 PF00571 CBS domain AFERRID_RS04860 PF01380 SIS domain AFERRID_RS04875 PF00483 Nucleotidyl transferase AFERRID_RS04880 PF01636 Phosphotransferase enzyme family AFERRID_RS04885 PF03968 OstA-like protein AFERRID_RS04885 PF04453 LPS transport system D AFERRID_RS04890 PF00639 PPIC-type PPIASE domain AFERRID_RS04890 PF09312 SurA N-terminal domain AFERRID_RS04900 PF01722 BolA-like protein AFERRID_RS04905 PF00462 Glutaredoxin AFERRID_RS04910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFERRID_RS04915 PF01634 ATP phosphoribosyltransferase AFERRID_RS04920 PF00815 Histidinol dehydrogenase AFERRID_RS04925 PF00155 Aminotransferase class I and II AFERRID_RS04930 PF00475 Imidazoleglycerol-phosphate dehydratase AFERRID_RS04935 PF00117 Glutamine amidotransferase class-I AFERRID_RS04940 PF00977 Histidine biosynthesis protein AFERRID_RS04945 PF00977 Histidine biosynthesis protein AFERRID_RS04950 PF01502 Phosphoribosyl-AMP cyclohydrolase AFERRID_RS04950 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AFERRID_RS04955 PF02416 mttA/Hcf106 family AFERRID_RS04960 PF02416 mttA/Hcf106 family AFERRID_RS04965 PF00902 Sec-independent protein translocase protein (TatC) AFERRID_RS04970 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFERRID_RS04970 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFERRID_RS04975 PF00101 Ribulose bisphosphate carboxylase, small chain AFERRID_RS04980 PF08406 CbbQ/NirQ/NorQ C-terminal AFERRID_RS04980 PF07728 AAA domain (dynein-related subfamily) AFERRID_RS04990 PF00216 Bacterial DNA-binding protein AFERRID_RS05000 PF01979 Amidohydrolase family AFERRID_RS05005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFERRID_RS05005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFERRID_RS05010 PF00156 Phosphoribosyl transferase domain AFERRID_RS05020 PF02622 Uncharacterized ACR, COG1678 AFERRID_RS05025 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AFERRID_RS05025 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AFERRID_RS05035 PF00285 Citrate synthase, C-terminal domain AFERRID_RS05040 PF01521 Iron-sulphur cluster biosynthesis AFERRID_RS05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS05045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFERRID_RS05050 PF02780 Transketolase, C-terminal domain AFERRID_RS05050 PF02779 Transketolase, pyrimidine binding domain AFERRID_RS05050 PF00364 Biotin-requiring enzyme AFERRID_RS05055 PF00676 Dehydrogenase E1 component AFERRID_RS05070 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFERRID_RS05070 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFERRID_RS05075 PF00380 Ribosomal protein S9/S16 AFERRID_RS05080 PF00572 Ribosomal protein L13 AFERRID_RS05090 PF00881 Nitroreductase family AFERRID_RS05125 PF17969 L,D-transpeptidase C-terminal domain AFERRID_RS05125 PF03734 L,D-transpeptidase catalytic domain AFERRID_RS05135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFERRID_RS05135 PF02403 Seryl-tRNA synthetase N-terminal domain AFERRID_RS05150 PF03548 Outer membrane lipoprotein carrier protein LolA AFERRID_RS05155 PF01580 FtsK/SpoIIIE family AFERRID_RS05155 PF09397 Ftsk gamma domain AFERRID_RS05155 PF17854 FtsK alpha domain AFERRID_RS05155 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AFERRID_RS05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS05170 PF09278 MerR, DNA binding AFERRID_RS05170 PF00376 MerR family regulatory protein AFERRID_RS05175 PF01142 tRNA pseudouridine synthase D (TruD) AFERRID_RS05180 PF02542 YgbB family AFERRID_RS05185 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AFERRID_RS05190 PF00271 Helicase conserved C-terminal domain AFERRID_RS05190 PF00270 DEAD/DEAH box helicase AFERRID_RS05190 PF03461 TRCF domain AFERRID_RS05190 PF17757 UvrB interaction domain AFERRID_RS05190 PF02559 CarD-like/TRCF domain AFERRID_RS05195 PF18429 Domain of unknown function (DUF5609) AFERRID_RS05200 PF00462 Glutaredoxin AFERRID_RS05200 PF08534 Redoxin AFERRID_RS05205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFERRID_RS05205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS05210 PF01048 Phosphorylase superfamily AFERRID_RS05215 PF00156 Phosphoribosyl transferase domain AFERRID_RS05235 PF01569 PAP2 superfamily AFERRID_RS05245 PF04002 RadC-like JAB domain AFERRID_RS05250 PF02441 Flavoprotein AFERRID_RS05250 PF04127 DNA / pantothenate metabolism flavoprotein AFERRID_RS05255 PF00692 dUTPase AFERRID_RS05260 PF01196 Ribosomal protein L17 AFERRID_RS05265 PF01000 RNA polymerase Rpb3/RpoA insert domain AFERRID_RS05265 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AFERRID_RS05265 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AFERRID_RS05270 PF00163 Ribosomal protein S4/S9 N-terminal domain AFERRID_RS05270 PF01479 S4 domain AFERRID_RS05275 PF00411 Ribosomal protein S11 AFERRID_RS05280 PF00416 Ribosomal protein S13/S18 AFERRID_RS05285 PF00444 Ribosomal protein L36 AFERRID_RS05290 PF01176 Translation initiation factor 1A / IF-1 AFERRID_RS05295 PF05191 Adenylate kinase, active site lid AFERRID_RS05300 PF00344 SecY translocase AFERRID_RS05305 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AFERRID_RS05310 PF00327 Ribosomal protein L30p/L7e AFERRID_RS05315 PF03719 Ribosomal protein S5, C-terminal domain AFERRID_RS05315 PF00333 Ribosomal protein S5, N-terminal domain AFERRID_RS05320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AFERRID_RS05325 PF00347 Ribosomal protein L6 AFERRID_RS05330 PF00410 Ribosomal protein S8 AFERRID_RS05335 PF00253 Ribosomal protein S14p/S29e AFERRID_RS05340 PF00281 Ribosomal protein L5 AFERRID_RS05340 PF00673 ribosomal L5P family C-terminus AFERRID_RS05345 PF00467 KOW motif AFERRID_RS05345 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AFERRID_RS05350 PF00238 Ribosomal protein L14p/L23e AFERRID_RS05355 PF00366 Ribosomal protein S17 AFERRID_RS05360 PF00831 Ribosomal L29 protein AFERRID_RS05365 PF00252 Ribosomal protein L16p/L10e AFERRID_RS05370 PF00189 Ribosomal protein S3, C-terminal domain AFERRID_RS05370 PF07650 KH domain AFERRID_RS05375 PF00237 Ribosomal protein L22p/L17e AFERRID_RS05380 PF00203 Ribosomal protein S19 AFERRID_RS05385 PF00181 Ribosomal Proteins L2, RNA binding domain AFERRID_RS05385 PF03947 Ribosomal Proteins L2, C-terminal domain AFERRID_RS05390 PF00276 Ribosomal protein L23 AFERRID_RS05395 PF00573 Ribosomal protein L4/L1 family AFERRID_RS05400 PF00297 Ribosomal protein L3 AFERRID_RS05405 PF00338 Ribosomal protein S10p/S20e AFERRID_RS05410 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS05410 PF03144 Elongation factor Tu domain 2 AFERRID_RS05410 PF03143 Elongation factor Tu C-terminal domain AFERRID_RS05415 PF03764 Elongation factor G, domain IV AFERRID_RS05415 PF03144 Elongation factor Tu domain 2 AFERRID_RS05415 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS05415 PF00679 Elongation factor G C-terminus AFERRID_RS05415 PF14492 Elongation Factor G, domain II AFERRID_RS05420 PF00177 Ribosomal protein S7p/S5e AFERRID_RS05425 PF00164 Ribosomal protein S12/S23 AFERRID_RS05430 PF04997 RNA polymerase Rpb1, domain 1 AFERRID_RS05430 PF00623 RNA polymerase Rpb1, domain 2 AFERRID_RS05430 PF04983 RNA polymerase Rpb1, domain 3 AFERRID_RS05430 PF04998 RNA polymerase Rpb1, domain 5 AFERRID_RS05430 PF05000 RNA polymerase Rpb1, domain 4 AFERRID_RS05435 PF04563 RNA polymerase beta subunit AFERRID_RS05435 PF04560 RNA polymerase Rpb2, domain 7 AFERRID_RS05435 PF00562 RNA polymerase Rpb2, domain 6 AFERRID_RS05435 PF10385 RNA polymerase beta subunit external 1 domain AFERRID_RS05435 PF04565 RNA polymerase Rpb2, domain 3 AFERRID_RS05435 PF04561 RNA polymerase Rpb2, domain 2 AFERRID_RS05440 PF16320 Ribosomal protein L7/L12 dimerisation domain AFERRID_RS05440 PF00542 Ribosomal protein L7/L12 C-terminal domain AFERRID_RS05445 PF00466 Ribosomal protein L10 AFERRID_RS05450 PF00687 Ribosomal protein L1p/L10e family AFERRID_RS05455 PF00298 Ribosomal protein L11, RNA binding domain AFERRID_RS05455 PF03946 Ribosomal protein L11, N-terminal domain AFERRID_RS05460 PF00467 KOW motif AFERRID_RS05460 PF02357 Transcription termination factor nusG AFERRID_RS05475 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS05475 PF03144 Elongation factor Tu domain 2 AFERRID_RS05475 PF03143 Elongation factor Tu C-terminal domain AFERRID_RS05495 PF04972 BON domain AFERRID_RS05495 PF00691 OmpA family AFERRID_RS05500 PF03109 ABC1 family AFERRID_RS05520 PF01029 NusB family AFERRID_RS05525 PF00885 6,7-dimethyl-8-ribityllumazine synthase AFERRID_RS05530 PF00925 GTP cyclohydrolase II AFERRID_RS05530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AFERRID_RS05535 PF00677 Lumazine binding domain AFERRID_RS05540 PF01872 RibD C-terminal domain AFERRID_RS05540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFERRID_RS05545 PF03477 ATP cone domain AFERRID_RS05560 PF00561 alpha/beta hydrolase fold AFERRID_RS05565 PF07021 Methionine biosynthesis protein MetW AFERRID_RS05565 PF00561 alpha/beta hydrolase fold AFERRID_RS05575 PF01209 ubiE/COQ5 methyltransferase family AFERRID_RS05580 PF08267 Cobalamin-independent synthase, N-terminal domain AFERRID_RS05580 PF01717 Cobalamin-independent synthase, Catalytic domain AFERRID_RS05585 PF00484 Carbonic anhydrase AFERRID_RS05590 PF01740 STAS domain AFERRID_RS05590 PF00916 Sulfate permease family AFERRID_RS05595 PF00171 Aldehyde dehydrogenase family AFERRID_RS05595 PF01619 Proline dehydrogenase AFERRID_RS05595 PF14850 DNA-binding domain of Proline dehydrogenase AFERRID_RS05595 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AFERRID_RS05610 PF02384 N-6 DNA Methylase AFERRID_RS05610 PF12161 HsdM N-terminal domain AFERRID_RS05625 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AFERRID_RS05630 PF00829 Ribosomal prokaryotic L21 protein AFERRID_RS05635 PF01016 Ribosomal L27 protein AFERRID_RS05640 PF01018 GTP1/OBG AFERRID_RS05640 PF01926 50S ribosome-binding GTPase AFERRID_RS05645 PF01472 PUA domain AFERRID_RS05645 PF00696 Amino acid kinase family AFERRID_RS05650 PF01475 Ferric uptake regulator family AFERRID_RS05655 PF04355 SmpA / OmlA family AFERRID_RS05660 PF03364 Polyketide cyclase / dehydrase and lipid transport AFERRID_RS05665 PF13091 PLD-like domain AFERRID_RS05665 PF13396 Phospholipase_D-nuclease N-terminal AFERRID_RS05670 PF01668 SmpB protein AFERRID_RS05690 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AFERRID_RS05690 PF02222 ATP-grasp domain AFERRID_RS05695 PF00731 AIR carboxylase AFERRID_RS05700 PF02390 Putative methyltransferase AFERRID_RS05705 PF13545 Crp-like helix-turn-helix domain AFERRID_RS05705 PF00027 Cyclic nucleotide-binding domain AFERRID_RS05710 PF00753 Metallo-beta-lactamase superfamily AFERRID_RS05730 PF00437 Type II/IV secretion system protein AFERRID_RS05745 PF01168 Alanine racemase, N-terminal domain AFERRID_RS05750 PF03807 NADP oxidoreductase coenzyme F420-dependent AFERRID_RS05750 PF14748 Pyrroline-5-carboxylate reductase dimerisation AFERRID_RS05755 PF02325 YGGT family AFERRID_RS05760 PF02594 Uncharacterised ACR, YggU family COG1872 AFERRID_RS05765 PF06968 Biotin and Thiamin Synthesis associated domain AFERRID_RS05765 PF04055 Radical SAM superfamily AFERRID_RS05775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFERRID_RS05775 PF00529 HlyD membrane-fusion protein of T1SS AFERRID_RS05780 PF00696 Amino acid kinase family AFERRID_RS05785 PF00440 Bacterial regulatory proteins, tetR family AFERRID_RS05805 PF00175 Oxidoreductase NAD-binding domain AFERRID_RS05805 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS05805 PF00970 Oxidoreductase FAD-binding domain AFERRID_RS05810 PF00929 Exonuclease AFERRID_RS05815 PF03649 Uncharacterised protein family (UPF0014) AFERRID_RS05820 PF04377 Arginine-tRNA-protein transferase, C terminus AFERRID_RS05820 PF04376 Arginine-tRNA-protein transferase, N terminus AFERRID_RS05825 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AFERRID_RS05830 PF01435 Peptidase family M48 AFERRID_RS05840 PF08241 Methyltransferase domain AFERRID_RS05845 PF00561 alpha/beta hydrolase fold AFERRID_RS05850 PF00155 Aminotransferase class I and II AFERRID_RS05855 PF00156 Phosphoribosyl transferase domain AFERRID_RS05865 PF03781 Sulfatase-modifying factor enzyme 1 AFERRID_RS05865 PF12867 DinB superfamily AFERRID_RS05870 PF00155 Aminotransferase class I and II AFERRID_RS05875 PF03279 Bacterial lipid A biosynthesis acyltransferase AFERRID_RS05880 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AFERRID_RS05890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AFERRID_RS05895 PF00535 Glycosyl transferase family 2 AFERRID_RS05910 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AFERRID_RS05915 PF13439 Glycosyltransferase Family 4 AFERRID_RS05915 PF00534 Glycosyl transferases group 1 AFERRID_RS05920 PF00457 Glycosyl hydrolases family 11 AFERRID_RS05920 PF01522 Polysaccharide deacetylase AFERRID_RS05925 PF00535 Glycosyl transferase family 2 AFERRID_RS05930 PF00293 NUDIX domain AFERRID_RS05935 PF01960 ArgJ family AFERRID_RS05940 PF07517 SecA DEAD-like domain AFERRID_RS05940 PF02810 SEC-C motif AFERRID_RS05940 PF07516 SecA Wing and Scaffold domain AFERRID_RS05940 PF01043 SecA preprotein cross-linking domain AFERRID_RS05950 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AFERRID_RS05955 PF02798 Glutathione S-transferase, N-terminal domain AFERRID_RS05955 PF00043 Glutathione S-transferase, C-terminal domain AFERRID_RS05960 PF00501 AMP-binding enzyme AFERRID_RS05965 PF01743 Poly A polymerase head domain AFERRID_RS05965 PF12627 Probable RNA and SrmB- binding site of polymerase A AFERRID_RS05965 PF13735 tRNA nucleotidyltransferase domain 2 putative AFERRID_RS05980 PF02381 MraZ protein, putative antitoxin-like AFERRID_RS05985 PF01795 MraW methylase family AFERRID_RS05995 PF03717 Penicillin-binding Protein dimerisation domain AFERRID_RS05995 PF00905 Penicillin binding protein transpeptidase domain AFERRID_RS06000 PF08245 Mur ligase middle domain AFERRID_RS06000 PF02875 Mur ligase family, glutamate ligase domain AFERRID_RS06000 PF01225 Mur ligase family, catalytic domain AFERRID_RS06005 PF01225 Mur ligase family, catalytic domain AFERRID_RS06005 PF08245 Mur ligase middle domain AFERRID_RS06005 PF02875 Mur ligase family, glutamate ligase domain AFERRID_RS06010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AFERRID_RS06010 PF00953 Glycosyl transferase family 4 AFERRID_RS06015 PF02875 Mur ligase family, glutamate ligase domain AFERRID_RS06015 PF08245 Mur ligase middle domain AFERRID_RS06020 PF01098 Cell cycle protein AFERRID_RS06025 PF04101 Glycosyltransferase family 28 C-terminal domain AFERRID_RS06025 PF03033 Glycosyltransferase family 28 N-terminal domain AFERRID_RS06030 PF01225 Mur ligase family, catalytic domain AFERRID_RS06030 PF02875 Mur ligase family, glutamate ligase domain AFERRID_RS06030 PF08245 Mur ligase middle domain AFERRID_RS06035 PF01565 FAD binding domain AFERRID_RS06035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AFERRID_RS06040 PF01820 D-ala D-ala ligase N-terminus AFERRID_RS06040 PF07478 D-ala D-ala ligase C-terminus AFERRID_RS06050 PF02491 SHS2 domain inserted in FTSA AFERRID_RS06055 PF12327 FtsZ family, C-terminal domain AFERRID_RS06055 PF00091 Tubulin/FtsZ family, GTPase domain AFERRID_RS06070 PF01220 Dehydroquinase class II AFERRID_RS06075 PF00364 Biotin-requiring enzyme AFERRID_RS06080 PF02785 Biotin carboxylase C-terminal domain AFERRID_RS06080 PF00289 Biotin carboxylase, N-terminal domain AFERRID_RS06080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFERRID_RS06095 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS06100 PF01551 Peptidase family M23 AFERRID_RS06100 PF10145 Phage-related minor tail protein AFERRID_RS06100 PF01464 Transglycosylase SLT domain AFERRID_RS06110 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AFERRID_RS06120 PF01121 Dephospho-CoA kinase AFERRID_RS06125 PF06750 Bacterial Peptidase A24 N-terminal domain AFERRID_RS06125 PF01478 Type IV leader peptidase family AFERRID_RS06135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS06135 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS06140 PF00437 Type II/IV secretion system protein AFERRID_RS06140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AFERRID_RS06145 PF08501 Shikimate dehydrogenase substrate binding domain AFERRID_RS06145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AFERRID_RS06150 PF03702 Anhydro-N-acetylmuramic acid kinase AFERRID_RS06155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFERRID_RS06160 PF00762 Ferrochelatase AFERRID_RS06170 PF13417 Glutathione S-transferase, N-terminal domain AFERRID_RS06170 PF00043 Glutathione S-transferase, C-terminal domain AFERRID_RS06175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AFERRID_RS06185 PF03372 Endonuclease/Exonuclease/phosphatase family AFERRID_RS06190 PF05175 Methyltransferase small domain AFERRID_RS06195 PF03466 LysR substrate binding domain AFERRID_RS06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS06200 PF07690 Major Facilitator Superfamily AFERRID_RS06205 PF00750 tRNA synthetases class I (R) AFERRID_RS06205 PF03485 Arginyl tRNA synthetase N terminal domain AFERRID_RS06205 PF05746 DALR anticodon binding domain AFERRID_RS06220 PF00398 Ribosomal RNA adenine dimethylase AFERRID_RS06230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AFERRID_RS06235 PF01479 S4 domain AFERRID_RS06240 PF00005 ABC transporter AFERRID_RS06255 PF02470 MlaD protein AFERRID_RS06260 PF02405 Permease MlaE AFERRID_RS06270 PF02675 S-adenosylmethionine decarboxylase AFERRID_RS06275 PF17284 Spermidine synthase tetramerisation domain AFERRID_RS06285 PF00230 Major intrinsic protein AFERRID_RS06295 PF04241 Protein of unknown function (DUF423) AFERRID_RS06320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFERRID_RS06325 PF04221 RelB antitoxin AFERRID_RS06335 PF09957 Bacterial antitoxin of type II TA system, VapB AFERRID_RS06340 PF01850 PIN domain AFERRID_RS06345 PF02384 N-6 DNA Methylase AFERRID_RS06345 PF12161 HsdM N-terminal domain AFERRID_RS06385 PF04055 Radical SAM superfamily AFERRID_RS06385 PF13186 Iron-sulfur cluster-binding domain AFERRID_RS06400 PF00589 Phage integrase family AFERRID_RS06410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFERRID_RS06415 PF04348 LppC putative lipoprotein AFERRID_RS06425 PF13580 SIS domain AFERRID_RS06430 PF02913 FAD linked oxidases, C-terminal domain AFERRID_RS06430 PF01565 FAD binding domain AFERRID_RS06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS06450 PF03466 LysR substrate binding domain AFERRID_RS06455 PF04055 Radical SAM superfamily AFERRID_RS06455 PF06969 HemN C-terminal domain AFERRID_RS06490 PF04055 Radical SAM superfamily AFERRID_RS06490 PF18693 TRAM domain AFERRID_RS06490 PF00919 Uncharacterized protein family UPF0004 AFERRID_RS06495 PF02152 Dihydroneopterin aldolase AFERRID_RS06500 PF02660 Glycerol-3-phosphate acyltransferase AFERRID_RS06510 PF00814 Glycoprotease family AFERRID_RS06515 PF04305 Protein of unknown function (DUF455) AFERRID_RS06550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFERRID_RS06560 PF00072 Response regulator receiver domain AFERRID_RS06560 PF00486 Transcriptional regulatory protein, C terminal AFERRID_RS06565 PF00672 HAMP domain AFERRID_RS06565 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS06580 PF00005 ABC transporter AFERRID_RS06630 PF08681 Protein of unknown function (DUF1778) AFERRID_RS06640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFERRID_RS06640 PF00403 Heavy-metal-associated domain AFERRID_RS06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS06645 PF00403 Heavy-metal-associated domain AFERRID_RS06650 PF02411 MerT mercuric transport protein AFERRID_RS06655 PF00376 MerR family regulatory protein AFERRID_RS06655 PF09278 MerR, DNA binding AFERRID_RS06675 PF13439 Glycosyltransferase Family 4 AFERRID_RS06675 PF00534 Glycosyl transferases group 1 AFERRID_RS06700 PF14667 Polysaccharide biosynthesis C-terminal domain AFERRID_RS06700 PF01943 Polysaccharide biosynthesis protein AFERRID_RS06730 PF02397 Bacterial sugar transferase AFERRID_RS06735 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AFERRID_RS06740 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AFERRID_RS06750 PF01850 PIN domain AFERRID_RS06765 PF04055 Radical SAM superfamily AFERRID_RS06770 PF06508 Queuosine biosynthesis protein QueC AFERRID_RS06785 PF02472 Biopolymer transport protein ExbD/TolR AFERRID_RS06790 PF01618 MotA/TolQ/ExbB proton channel family AFERRID_RS06795 PF03061 Thioesterase superfamily AFERRID_RS06800 PF17864 RuvB AAA lid domain AFERRID_RS06800 PF05491 RuvB C-terminal winged helix domain AFERRID_RS06800 PF05496 Holliday junction DNA helicase RuvB P-loop domain AFERRID_RS06805 PF07499 RuvA, C-terminal domain AFERRID_RS06805 PF01330 RuvA N terminal domain AFERRID_RS06810 PF02075 Crossover junction endodeoxyribonuclease RuvC AFERRID_RS06815 PF01709 Transcriptional regulator AFERRID_RS06825 PF02445 Quinolinate synthetase A protein AFERRID_RS06830 PF02938 GAD domain AFERRID_RS06830 PF00152 tRNA synthetases class II (D, K and N) AFERRID_RS06830 PF01336 OB-fold nucleic acid binding domain AFERRID_RS06840 PF01914 MarC family integral membrane protein AFERRID_RS06910 PF07690 Major Facilitator Superfamily AFERRID_RS06920 PF00529 HlyD membrane-fusion protein of T1SS AFERRID_RS06920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFERRID_RS06925 PF03466 LysR substrate binding domain AFERRID_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS06930 PF00005 ABC transporter AFERRID_RS06930 PF12848 ABC transporter AFERRID_RS06935 PF00468 Ribosomal protein L34 AFERRID_RS06940 PF00825 Ribonuclease P AFERRID_RS06945 PF01809 Putative membrane protein insertion efficiency factor AFERRID_RS06950 PF14849 YidC periplasmic domain AFERRID_RS06950 PF02096 60Kd inner membrane protein AFERRID_RS06955 PF10396 GTP-binding protein TrmE N-terminus AFERRID_RS06955 PF01926 50S ribosome-binding GTPase AFERRID_RS06955 PF12631 MnmE helical domain AFERRID_RS06965 PF01011 PQQ enzyme repeat AFERRID_RS06965 PF13570 PQQ-like domain AFERRID_RS06965 PF13360 PQQ-like domain AFERRID_RS06970 PF00158 Sigma-54 interaction domain AFERRID_RS06970 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS06970 PF00072 Response regulator receiver domain AFERRID_RS06980 PF00034 Cytochrome c AFERRID_RS06985 PF00106 short chain dehydrogenase AFERRID_RS06990 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AFERRID_RS06990 PF00355 Rieske [2Fe-2S] domain AFERRID_RS06995 PF00033 Cytochrome b/b6/petB AFERRID_RS06995 PF00032 Cytochrome b(C-terminal)/b6/petD AFERRID_RS07005 PF05140 ResB-like family AFERRID_RS07010 PF01578 Cytochrome C assembly protein AFERRID_RS07055 PF00667 FAD binding domain AFERRID_RS07055 PF00258 Flavodoxin AFERRID_RS07055 PF00175 Oxidoreductase NAD-binding domain AFERRID_RS07060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFERRID_RS07060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFERRID_RS07065 PF01507 Phosphoadenosine phosphosulfate reductase family AFERRID_RS07070 PF01507 Phosphoadenosine phosphosulfate reductase family AFERRID_RS07075 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS07080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFERRID_RS07100 PF02416 mttA/Hcf106 family AFERRID_RS07125 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS07130 PF00072 Response regulator receiver domain AFERRID_RS07150 PF07690 Major Facilitator Superfamily AFERRID_RS07155 PF01040 UbiA prenyltransferase family AFERRID_RS07165 PF00127 Copper binding proteins, plastocyanin/azurin family AFERRID_RS07180 PF00115 Cytochrome C and Quinol oxidase polypeptide I AFERRID_RS07185 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AFERRID_RS07195 PF00034 Cytochrome c AFERRID_RS07210 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS07210 PF00158 Sigma-54 interaction domain AFERRID_RS07210 PF00072 Response regulator receiver domain AFERRID_RS07215 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS07215 PF00989 PAS fold AFERRID_RS07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS07215 PF00672 HAMP domain AFERRID_RS07225 PF01029 NusB family AFERRID_RS07225 PF01189 16S rRNA methyltransferase RsmB/F AFERRID_RS07230 PF02911 Formyl transferase, C-terminal domain AFERRID_RS07230 PF00551 Formyl transferase AFERRID_RS07235 PF01327 Polypeptide deformylase AFERRID_RS07245 PF17782 DprA winged helix domain AFERRID_RS07245 PF02481 DNA recombination-mediator protein A AFERRID_RS07250 PF04361 Protein of unknown function (DUF494) AFERRID_RS07260 PF11953 Domain of unknown function (DUF3470) AFERRID_RS07260 PF00037 4Fe-4S binding domain AFERRID_RS07265 PF03775 Septum formation inhibitor MinC, C-terminal domain AFERRID_RS07265 PF05209 Septum formation inhibitor MinC, N-terminal domain AFERRID_RS07270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AFERRID_RS07275 PF03776 Septum formation topological specificity factor MinE AFERRID_RS07285 PF13401 AAA domain AFERRID_RS07285 PF01471 Putative peptidoglycan binding domain AFERRID_RS07290 PF00263 Bacterial type II and III secretion system protein AFERRID_RS07290 PF03958 Bacterial type II/III secretion system short domain AFERRID_RS07340 PF07963 Prokaryotic N-terminal methylation motif AFERRID_RS07340 PF08334 Type II secretion system (T2SS), protein G AFERRID_RS07345 PF07963 Prokaryotic N-terminal methylation motif AFERRID_RS07350 PF00482 Type II secretion system (T2SS), protein F AFERRID_RS07355 PF00437 Type II/IV secretion system protein AFERRID_RS07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS07365 PF03707 Bacterial signalling protein N terminal repeat AFERRID_RS07365 PF00990 Diguanylate cyclase, GGDEF domain AFERRID_RS07365 PF00563 EAL domain AFERRID_RS07370 PF01751 Toprim domain AFERRID_RS07370 PF00204 DNA gyrase B AFERRID_RS07370 PF18053 DNA gyrase B subunit insert domain AFERRID_RS07370 PF00986 DNA gyrase B subunit, carboxyl terminus AFERRID_RS07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS07375 PF02463 RecF/RecN/SMC N terminal domain AFERRID_RS07380 PF02768 DNA polymerase III beta subunit, C-terminal domain AFERRID_RS07380 PF02767 DNA polymerase III beta subunit, central domain AFERRID_RS07380 PF00712 DNA polymerase III beta subunit, N-terminal domain AFERRID_RS07385 PF11638 DnaA N-terminal domain AFERRID_RS07385 PF08299 Bacterial dnaA protein helix-turn-helix AFERRID_RS07385 PF00308 Bacterial dnaA protein AFERRID_RS07390 PF00106 short chain dehydrogenase AFERRID_RS07395 PF08543 Phosphomethylpyrimidine kinase AFERRID_RS07400 PF02581 Thiamine monophosphate synthase AFERRID_RS07405 PF00202 Aminotransferase class-III AFERRID_RS07410 PF01230 HIT domain AFERRID_RS07420 PF03900 Porphobilinogen deaminase, C-terminal domain AFERRID_RS07420 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AFERRID_RS07430 PF00490 Delta-aminolevulinic acid dehydratase AFERRID_RS07440 PF07690 Major Facilitator Superfamily AFERRID_RS07450 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AFERRID_RS07455 PF00483 Nucleotidyl transferase AFERRID_RS07455 PF01050 Mannose-6-phosphate isomerase AFERRID_RS07460 PF16363 GDP-mannose 4,6 dehydratase AFERRID_RS07465 PF16363 GDP-mannose 4,6 dehydratase AFERRID_RS07470 PF01924 Hydrogenase formation hypA family AFERRID_RS07475 PF01455 HupF/HypC family AFERRID_RS07480 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFERRID_RS07485 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AFERRID_RS07490 PF00374 Nickel-dependent hydrogenase AFERRID_RS07495 PF13183 4Fe-4S dicluster domain AFERRID_RS07495 PF02754 Cysteine-rich domain AFERRID_RS07495 PF02665 Nitrate reductase gamma subunit AFERRID_RS07525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFERRID_RS07525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFERRID_RS07535 PF00206 Lyase AFERRID_RS07535 PF14698 Argininosuccinate lyase C-terminal AFERRID_RS07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS07545 PF00672 HAMP domain AFERRID_RS07545 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS07580 PF00589 Phage integrase family AFERRID_RS07605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFERRID_RS07620 PF01741 Large-conductance mechanosensitive channel, MscL AFERRID_RS07625 PF02646 RmuC family AFERRID_RS07630 PF02401 LytB protein AFERRID_RS07635 PF04452 RNA methyltransferase AFERRID_RS07645 PF00459 Inositol monophosphatase family AFERRID_RS07650 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AFERRID_RS07655 PF00456 Transketolase, thiamine diphosphate binding domain AFERRID_RS07655 PF02779 Transketolase, pyrimidine binding domain AFERRID_RS07655 PF02780 Transketolase, C-terminal domain AFERRID_RS07660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFERRID_RS07660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFERRID_RS07670 PF02887 Pyruvate kinase, alpha/beta domain AFERRID_RS07670 PF00224 Pyruvate kinase, barrel domain AFERRID_RS07675 PF01116 Fructose-bisphosphate aldolase class-II AFERRID_RS07680 PF00834 Ribulose-phosphate 3 epimerase family AFERRID_RS07685 PF13419 Haloacid dehalogenase-like hydrolase AFERRID_RS07690 PF00425 chorismate binding enzyme AFERRID_RS07690 PF04715 Anthranilate synthase component I, N terminal region AFERRID_RS07695 PF00117 Glutamine amidotransferase class-I AFERRID_RS07700 PF02885 Glycosyl transferase family, helical bundle domain AFERRID_RS07700 PF00591 Glycosyl transferase family, a/b domain AFERRID_RS07705 PF00218 Indole-3-glycerol phosphate synthase AFERRID_RS07715 PF02082 Transcriptional regulator AFERRID_RS07720 PF03232 Ubiquinone biosynthesis protein COQ7 AFERRID_RS07735 PF00005 ABC transporter AFERRID_RS07740 PF01061 ABC-2 type transporter AFERRID_RS07750 PF01906 Putative heavy-metal-binding AFERRID_RS07765 PF02798 Glutathione S-transferase, N-terminal domain AFERRID_RS07770 PF01381 Helix-turn-helix AFERRID_RS07790 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AFERRID_RS07790 PF11867 Domain of unknown function (DUF3387) AFERRID_RS07790 PF18766 SWI2/SNF2 ATPase AFERRID_RS07800 PF01420 Type I restriction modification DNA specificity domain AFERRID_RS07830 PF02384 N-6 DNA Methylase AFERRID_RS07865 PF02678 Pirin AFERRID_RS07865 PF05726 Pirin C-terminal cupin domain AFERRID_RS07870 PF03358 NADPH-dependent FMN reductase AFERRID_RS07900 PF00994 Probable molybdopterin binding domain AFERRID_RS07915 PF13932 GidA associated domain AFERRID_RS07915 PF01134 Glucose inhibited division protein A AFERRID_RS07920 PF02527 rRNA small subunit methyltransferase G AFERRID_RS07925 PF13614 AAA domain AFERRID_RS07930 PF02195 ParB-like nuclease domain AFERRID_RS07930 PF17762 HTH domain found in ParB protein AFERRID_RS07940 PF00119 ATP synthase A chain AFERRID_RS07945 PF00137 ATP synthase subunit C AFERRID_RS07950 PF00430 ATP synthase B/B' CF(0) AFERRID_RS07955 PF00213 ATP synthase delta (OSCP) subunit AFERRID_RS07960 PF00306 ATP synthase alpha/beta chain, C terminal domain AFERRID_RS07960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFERRID_RS07960 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFERRID_RS07965 PF00231 ATP synthase AFERRID_RS07970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFERRID_RS07970 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFERRID_RS07975 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AFERRID_RS07975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AFERRID_RS07980 PF12804 MobA-like NTP transferase domain AFERRID_RS07980 PF00132 Bacterial transferase hexapeptide (six repeats) AFERRID_RS07980 PF14602 Hexapeptide repeat of succinyl-transferase AFERRID_RS07985 PF01380 SIS domain AFERRID_RS07995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFERRID_RS07995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFERRID_RS08000 PF00183 Hsp90 protein AFERRID_RS08000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS08005 PF14716 Helix-hairpin-helix domain AFERRID_RS08005 PF14791 DNA polymerase beta thumb AFERRID_RS08005 PF02811 PHP domain AFERRID_RS08010 PF05139 Erythromycin esterase AFERRID_RS08010 PF00156 Phosphoribosyl transferase domain AFERRID_RS08020 PF01556 DnaJ C terminal domain AFERRID_RS08020 PF00226 DnaJ domain AFERRID_RS08025 PF00580 UvrD/REP helicase N-terminal domain AFERRID_RS08025 PF13361 UvrD-like helicase C-terminal domain AFERRID_RS08045 PF01636 Phosphotransferase enzyme family AFERRID_RS08055 PF03641 Possible lysine decarboxylase AFERRID_RS08060 PF01612 3'-5' exonuclease AFERRID_RS08060 PF00476 DNA polymerase family A AFERRID_RS08060 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFERRID_RS08060 PF01367 5'-3' exonuclease, C-terminal SAM fold AFERRID_RS08065 PF02254 TrkA-N domain AFERRID_RS08065 PF07885 Ion channel AFERRID_RS08070 PF01926 50S ribosome-binding GTPase AFERRID_RS08080 PF02261 Aspartate decarboxylase AFERRID_RS08085 PF00689 Cation transporting ATPase, C-terminus AFERRID_RS08085 PF00690 Cation transporter/ATPase, N-terminus AFERRID_RS08090 PF00579 tRNA synthetases class I (W and Y) AFERRID_RS08120 PF02576 RimP N-terminal domain AFERRID_RS08120 PF17384 RimP C-terminal SH3 domain AFERRID_RS08125 PF00575 S1 RNA binding domain AFERRID_RS08125 PF13184 NusA-like KH domain AFERRID_RS08125 PF08529 NusA N-terminal domain AFERRID_RS08130 PF08364 Bacterial translation initiation factor IF-2 associated region AFERRID_RS08130 PF04760 Translation initiation factor IF-2, N-terminal region AFERRID_RS08130 PF11987 Translation-initiation factor 2 AFERRID_RS08130 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS08135 PF02033 Ribosome-binding factor A AFERRID_RS08140 PF09157 Pseudouridine synthase II TruB, C-terminal AFERRID_RS08140 PF16198 tRNA pseudouridylate synthase B C-terminal domain AFERRID_RS08140 PF01509 TruB family pseudouridylate synthase (N terminal domain) AFERRID_RS08145 PF00312 Ribosomal protein S15 AFERRID_RS08150 PF00575 S1 RNA binding domain AFERRID_RS08150 PF03725 3' exoribonuclease family, domain 2 AFERRID_RS08150 PF01138 3' exoribonuclease family, domain 1 AFERRID_RS08150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AFERRID_RS08150 PF00013 KH domain AFERRID_RS08155 PF05193 Peptidase M16 inactive domain AFERRID_RS08155 PF00675 Insulinase (Peptidase family M16) AFERRID_RS08160 PF00753 Metallo-beta-lactamase superfamily AFERRID_RS08160 PF16123 Hydroxyacylglutathione hydrolase C-terminus AFERRID_RS08165 PF01209 ubiE/COQ5 methyltransferase family AFERRID_RS08170 PF00075 RNase H AFERRID_RS08175 PF00929 Exonuclease AFERRID_RS08185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFERRID_RS08195 PF00764 Arginosuccinate synthase AFERRID_RS08200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFERRID_RS08200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFERRID_RS08205 PF00202 Aminotransferase class-III AFERRID_RS08210 PF01842 ACT domain AFERRID_RS08210 PF13840 ACT domain AFERRID_RS08210 PF00696 Amino acid kinase family AFERRID_RS08240 PF00923 Transaldolase/Fructose-6-phosphate aldolase AFERRID_RS08250 PF01476 LysM domain AFERRID_RS08250 PF01464 Transglycosylase SLT domain AFERRID_RS08255 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFERRID_RS08280 PF00330 Aconitase family (aconitate hydratase) AFERRID_RS08285 PF00180 Isocitrate/isopropylmalate dehydrogenase AFERRID_RS08290 PF08442 ATP-grasp domain AFERRID_RS08290 PF00549 CoA-ligase AFERRID_RS08300 PF02629 CoA binding domain AFERRID_RS08300 PF00549 CoA-ligase AFERRID_RS08305 PF00795 Carbon-nitrogen hydrolase AFERRID_RS08305 PF02540 NAD synthase AFERRID_RS08310 PF00543 Nitrogen regulatory protein P-II AFERRID_RS08315 PF13525 Outer membrane lipoprotein AFERRID_RS08320 PF00849 RNA pseudouridylate synthase AFERRID_RS08320 PF01479 S4 domain AFERRID_RS08330 PF03079 ARD/ARD' family AFERRID_RS08335 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFERRID_RS08335 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFERRID_RS08345 PF00596 Class II Aldolase and Adducin N-terminal domain AFERRID_RS08355 PF01327 Polypeptide deformylase AFERRID_RS08365 PF16363 GDP-mannose 4,6 dehydratase AFERRID_RS08370 PF04321 RmlD substrate binding domain AFERRID_RS08385 PF00483 Nucleotidyl transferase AFERRID_RS08395 PF00158 Sigma-54 interaction domain AFERRID_RS08395 PF00072 Response regulator receiver domain AFERRID_RS08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS08405 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS08410 PF02463 RecF/RecN/SMC N terminal domain AFERRID_RS08415 PF01513 ATP-NAD kinase AFERRID_RS08420 PF03309 Type III pantothenate kinase AFERRID_RS08425 PF02237 Biotin protein ligase C terminal domain AFERRID_RS08425 PF03099 Biotin/lipoate A/B protein ligase family AFERRID_RS08425 PF08279 HTH domain AFERRID_RS08430 PF00171 Aldehyde dehydrogenase family AFERRID_RS08440 PF06144 DNA polymerase III, delta subunit AFERRID_RS08440 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AFERRID_RS08450 PF13603 Leucyl-tRNA synthetase, Domain 2 AFERRID_RS08450 PF08264 Anticodon-binding domain of tRNA AFERRID_RS08450 PF00133 tRNA synthetases class I (I, L, M and V) AFERRID_RS08455 PF03358 NADPH-dependent FMN reductase AFERRID_RS08460 PF04264 YceI-like domain AFERRID_RS08465 PF01427 D-ala-D-ala dipeptidase AFERRID_RS08470 PF06827 Zinc finger found in FPG and IleRS AFERRID_RS08470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFERRID_RS08470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFERRID_RS08480 PF01545 Cation efflux family AFERRID_RS08480 PF16916 Dimerisation domain of Zinc Transporter AFERRID_RS08485 PF00120 Glutamine synthetase, catalytic domain AFERRID_RS08485 PF03951 Glutamine synthetase, beta-Grasp domain AFERRID_RS08495 PF01975 Survival protein SurE AFERRID_RS08505 PF04539 Sigma-70 region 3 AFERRID_RS08505 PF04542 Sigma-70 region 2 AFERRID_RS08505 PF00140 Sigma-70 factor, region 1.2 AFERRID_RS08505 PF04545 Sigma-70, region 4 AFERRID_RS08510 PF04430 Protein of unknown function (DUF498/DUF598) AFERRID_RS08515 PF00155 Aminotransferase class I and II AFERRID_RS08520 PF01842 ACT domain AFERRID_RS08520 PF03447 Homoserine dehydrogenase, NAD binding domain AFERRID_RS08520 PF00742 Homoserine dehydrogenase AFERRID_RS08525 PF00291 Pyridoxal-phosphate dependent enzyme AFERRID_RS08535 PF02272 DHHA1 domain AFERRID_RS08535 PF01368 DHH family AFERRID_RS08535 PF17768 RecJ OB domain AFERRID_RS08545 PF00152 tRNA synthetases class II (D, K and N) AFERRID_RS08545 PF01336 OB-fold nucleic acid binding domain AFERRID_RS08550 PF12704 MacB-like periplasmic core domain AFERRID_RS08550 PF02687 FtsX-like permease family AFERRID_RS08555 PF00005 ABC transporter AFERRID_RS08565 PF03772 Competence protein AFERRID_RS08565 PF00753 Metallo-beta-lactamase superfamily AFERRID_RS08570 PF01618 MotA/TolQ/ExbB proton channel family AFERRID_RS08575 PF02472 Biopolymer transport protein ExbD/TolR AFERRID_RS08590 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AFERRID_RS08595 PF03966 Trm112p-like protein AFERRID_RS08600 PF02348 Cytidylyltransferase AFERRID_RS08605 PF00719 Inorganic pyrophosphatase AFERRID_RS08615 PF13495 Phage integrase, N-terminal SAM-like domain AFERRID_RS08615 PF00589 Phage integrase family AFERRID_RS08640 PF14552 Tautomerase enzyme AFERRID_RS08650 PF13007 Transposase C of IS166 homeodomain AFERRID_RS08650 PF03050 Transposase IS66 family AFERRID_RS08650 PF13005 zinc-finger binding domain of transposase IS66 AFERRID_RS08650 PF13817 IS66 C-terminal element AFERRID_RS08710 PF00034 Cytochrome c AFERRID_RS08710 PF03150 Di-haem cytochrome c peroxidase AFERRID_RS08715 PF03167 Uracil DNA glycosylase superfamily AFERRID_RS08720 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AFERRID_RS08725 PF00004 ATPase family associated with various cellular activities (AAA) AFERRID_RS08725 PF07724 AAA domain (Cdc48 subfamily) AFERRID_RS08725 PF17871 AAA lid domain AFERRID_RS08725 PF02861 Clp amino terminal domain, pathogenicity island component AFERRID_RS08725 PF10431 C-terminal, D2-small domain, of ClpB protein AFERRID_RS08730 PF02617 ATP-dependent Clp protease adaptor protein ClpS AFERRID_RS08740 PF01965 DJ-1/PfpI family AFERRID_RS08745 PF03572 Peptidase family S41 AFERRID_RS08745 PF13180 PDZ domain AFERRID_RS08755 PF01676 Metalloenzyme superfamily AFERRID_RS08755 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AFERRID_RS08760 PF00343 Carbohydrate phosphorylase AFERRID_RS08770 PF00581 Rhodanese-like domain AFERRID_RS08775 PF00294 pfkB family carbohydrate kinase AFERRID_RS08785 PF02773 S-adenosylmethionine synthetase, C-terminal domain AFERRID_RS08785 PF02772 S-adenosylmethionine synthetase, central domain AFERRID_RS08785 PF00438 S-adenosylmethionine synthetase, N-terminal domain AFERRID_RS08790 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AFERRID_RS08790 PF05221 S-adenosyl-L-homocysteine hydrolase AFERRID_RS08795 PF02219 Methylenetetrahydrofolate reductase AFERRID_RS08800 PF00485 Phosphoribulokinase / Uridine kinase family AFERRID_RS08815 PF14306 PUA-like domain AFERRID_RS08815 PF01747 ATP-sulfurylase AFERRID_RS08820 PF00156 Phosphoribosyl transferase domain AFERRID_RS08825 PF00118 TCP-1/cpn60 chaperonin family AFERRID_RS08830 PF00166 Chaperonin 10 Kd subunit AFERRID_RS08850 PF01063 Amino-transferase class IV AFERRID_RS08855 PF03710 Glutamate-ammonia ligase adenylyltransferase AFERRID_RS08855 PF08335 GlnD PII-uridylyltransferase AFERRID_RS08865 PF00795 Carbon-nitrogen hydrolase AFERRID_RS08870 PF00005 ABC transporter AFERRID_RS08870 PF06472 ABC transporter transmembrane region 2 AFERRID_RS08885 PF01252 Signal peptidase (SPase) II AFERRID_RS08890 PF06827 Zinc finger found in FPG and IleRS AFERRID_RS08890 PF00133 tRNA synthetases class I (I, L, M and V) AFERRID_RS08890 PF08264 Anticodon-binding domain of tRNA AFERRID_RS08895 PF06574 FAD synthetase AFERRID_RS08895 PF01687 Riboflavin kinase AFERRID_RS08915 PF08340 Domain of unknown function (DUF1732) AFERRID_RS08915 PF03755 YicC-like family, N-terminal region AFERRID_RS08920 PF00625 Guanylate kinase AFERRID_RS08925 PF01192 RNA polymerase Rpb6 AFERRID_RS08930 PF04607 Region found in RelA / SpoT proteins AFERRID_RS08930 PF02824 TGS domain AFERRID_RS08930 PF13291 ACT domain AFERRID_RS08935 PF01042 Endoribonuclease L-PSP AFERRID_RS08945 PF17191 RecG wedge domain AFERRID_RS08945 PF00270 DEAD/DEAH box helicase AFERRID_RS08945 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AFERRID_RS08955 PF01593 Flavin containing amine oxidoreductase AFERRID_RS08960 PF01594 AI-2E family transporter AFERRID_RS08970 PF01871 AMMECR1 AFERRID_RS08975 PF04055 Radical SAM superfamily AFERRID_RS08980 PF02321 Outer membrane efflux protein AFERRID_RS08985 PF00425 chorismate binding enzyme AFERRID_RS08985 PF04715 Anthranilate synthase component I, N terminal region AFERRID_RS09005 PF09588 YqaJ-like viral recombinase domain AFERRID_RS09040 PF03050 Transposase IS66 family AFERRID_RS09040 PF13005 zinc-finger binding domain of transposase IS66 AFERRID_RS09040 PF13817 IS66 C-terminal element AFERRID_RS09040 PF13007 Transposase C of IS166 homeodomain AFERRID_RS09060 PF00589 Phage integrase family AFERRID_RS09080 PF00271 Helicase conserved C-terminal domain AFERRID_RS09080 PF03880 DbpA RNA binding domain AFERRID_RS09080 PF00270 DEAD/DEAH box helicase AFERRID_RS09085 PF00313 'Cold-shock' DNA-binding domain AFERRID_RS09090 PF00271 Helicase conserved C-terminal domain AFERRID_RS09090 PF17764 3′ DNA-binding domain (3′BD) AFERRID_RS09090 PF18074 Primosomal protein N C-terminal domain AFERRID_RS09090 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AFERRID_RS09090 PF00270 DEAD/DEAH box helicase AFERRID_RS09095 PF01040 UbiA prenyltransferase family AFERRID_RS09105 PF00398 Ribosomal RNA adenine dimethylase AFERRID_RS09115 PF00919 Uncharacterized protein family UPF0004 AFERRID_RS09115 PF01938 TRAM domain AFERRID_RS09115 PF04055 Radical SAM superfamily AFERRID_RS09120 PF02562 PhoH-like protein AFERRID_RS09125 PF02130 Uncharacterized protein family UPF0054 AFERRID_RS09130 PF03471 Transporter associated domain AFERRID_RS09130 PF00571 CBS domain AFERRID_RS09135 PF00795 Carbon-nitrogen hydrolase AFERRID_RS09140 PF01523 Putative modulator of DNA gyrase AFERRID_RS09150 PF00005 ABC transporter AFERRID_RS09160 PF00950 ABC 3 transport family AFERRID_RS09205 PF13439 Glycosyltransferase Family 4 AFERRID_RS09205 PF00534 Glycosyl transferases group 1 AFERRID_RS09215 PF00664 ABC transporter transmembrane region AFERRID_RS09215 PF00005 ABC transporter AFERRID_RS09230 PF00300 Histidine phosphatase superfamily (branch 1) AFERRID_RS09230 PF13456 Reverse transcriptase-like AFERRID_RS09245 PF08241 Methyltransferase domain AFERRID_RS09250 PF00330 Aconitase family (aconitate hydratase) AFERRID_RS09260 PF00694 Aconitase C-terminal domain AFERRID_RS09270 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AFERRID_RS09270 PF01243 Pyridoxamine 5'-phosphate oxidase AFERRID_RS09275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AFERRID_RS09290 PF01654 Cytochrome bd terminal oxidase subunit I AFERRID_RS09320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AFERRID_RS09320 PF06481 COX Aromatic Rich Motif AFERRID_RS09325 PF00115 Cytochrome C and Quinol oxidase polypeptide I AFERRID_RS09330 PF00510 Cytochrome c oxidase subunit III AFERRID_RS09340 PF01040 UbiA prenyltransferase family AFERRID_RS09345 PF07690 Major Facilitator Superfamily AFERRID_RS09350 PF02673 Bacitracin resistance protein BacA AFERRID_RS09355 PF03449 Transcription elongation factor, N-terminal AFERRID_RS09355 PF01272 Transcription elongation factor, GreA/GreB, C-term AFERRID_RS09360 PF02142 MGS-like domain AFERRID_RS09360 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AFERRID_RS09360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFERRID_RS09365 PF00117 Glutamine amidotransferase class-I AFERRID_RS09365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AFERRID_RS09375 PF05690 Thiazole biosynthesis protein ThiG AFERRID_RS09375 PF02597 ThiS family AFERRID_RS09380 PF05690 Thiazole biosynthesis protein ThiG AFERRID_RS09390 PF08245 Mur ligase middle domain AFERRID_RS09390 PF02875 Mur ligase family, glutamate ligase domain AFERRID_RS09390 PF01225 Mur ligase family, catalytic domain AFERRID_RS09395 PF02441 Flavoprotein AFERRID_RS09400 PF00005 ABC transporter AFERRID_RS09405 PF02405 Permease MlaE AFERRID_RS09425 PF00899 ThiF family AFERRID_RS09435 PF12704 MacB-like periplasmic core domain AFERRID_RS09435 PF02687 FtsX-like permease family AFERRID_RS09440 PF00005 ABC transporter AFERRID_RS09450 PF00085 Thioredoxin AFERRID_RS09455 PF07498 Rho termination factor, N-terminal domain AFERRID_RS09455 PF07497 Rho termination factor, RNA-binding domain AFERRID_RS09455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFERRID_RS09460 PF01197 Ribosomal protein L31 AFERRID_RS09465 PF00390 Malic enzyme, N-terminal domain AFERRID_RS09465 PF03949 Malic enzyme, NAD binding domain AFERRID_RS09470 PF01594 AI-2E family transporter AFERRID_RS09475 PF00920 Dehydratase family AFERRID_RS09485 PF00696 Amino acid kinase family AFERRID_RS09485 PF00583 Acetyltransferase (GNAT) family AFERRID_RS09490 PF01722 BolA-like protein AFERRID_RS09495 PF03795 YCII-related domain AFERRID_RS09500 PF04279 Intracellular septation protein A AFERRID_RS09510 PF00459 Inositol monophosphatase family AFERRID_RS09515 PF00588 SpoU rRNA Methylase family AFERRID_RS09520 PF00132 Bacterial transferase hexapeptide (six repeats) AFERRID_RS09530 PF00266 Aminotransferase class-V AFERRID_RS09535 PF01592 NifU-like N terminal domain AFERRID_RS09540 PF01521 Iron-sulphur cluster biosynthesis AFERRID_RS09545 PF07743 HSCB C-terminal oligomerisation domain AFERRID_RS09550 PF00012 Hsp70 protein AFERRID_RS09555 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS09560 PF04384 Iron-sulphur cluster assembly AFERRID_RS09570 PF01734 Patatin-like phospholipase AFERRID_RS09595 PF02634 FdhD/NarQ family AFERRID_RS09605 PF01568 Molydopterin dinucleotide binding domain AFERRID_RS09605 PF00384 Molybdopterin oxidoreductase AFERRID_RS09620 PF04828 Glutathione-dependent formaldehyde-activating enzyme AFERRID_RS09625 PF08240 Alcohol dehydrogenase GroES-like domain AFERRID_RS09625 PF00107 Zinc-binding dehydrogenase AFERRID_RS09630 PF00756 Putative esterase AFERRID_RS09635 PF03466 LysR substrate binding domain AFERRID_RS09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS09640 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS09640 PF00158 Sigma-54 interaction domain AFERRID_RS09640 PF00072 Response regulator receiver domain AFERRID_RS09645 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFERRID_RS09645 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AFERRID_RS09650 PF00374 Nickel-dependent hydrogenase AFERRID_RS09690 PF01106 NifU-like domain AFERRID_RS09700 PF00708 Acylphosphatase AFERRID_RS09700 PF17788 HypF Kae1-like domain AFERRID_RS09700 PF01300 Telomere recombination AFERRID_RS09700 PF07503 HypF finger AFERRID_RS09705 PF01455 HupF/HypC family AFERRID_RS09710 PF13580 SIS domain AFERRID_RS09715 PF01924 Hydrogenase formation hypA family AFERRID_RS09720 PF02769 AIR synthase related protein, C-terminal domain AFERRID_RS09720 PF00586 AIR synthase related protein, N-terminal domain AFERRID_RS09725 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AFERRID_RS09730 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFERRID_RS09740 PF01266 FAD dependent oxidoreductase AFERRID_RS09755 PF00585 C-terminal regulatory domain of Threonine dehydratase AFERRID_RS09755 PF00291 Pyridoxal-phosphate dependent enzyme AFERRID_RS09780 PF01553 Acyltransferase AFERRID_RS09785 PF01208 Uroporphyrinogen decarboxylase (URO-D) AFERRID_RS09790 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AFERRID_RS09790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS09800 PF13286 Phosphohydrolase-associated domain AFERRID_RS09800 PF01966 HD domain AFERRID_RS09805 PF02511 Thymidylate synthase complementing protein AFERRID_RS09815 PF01202 Shikimate kinase AFERRID_RS09820 PF11741 AMIN domain AFERRID_RS09820 PF00263 Bacterial type II and III secretion system protein AFERRID_RS09820 PF03958 Bacterial type II/III secretion system short domain AFERRID_RS09820 PF07660 Secretin and TonB N terminus short domain AFERRID_RS09840 PF11104 Type IV pilus assembly protein PilM; AFERRID_RS09845 PF14437 MafB19-like deaminase AFERRID_RS09850 PF01894 Uncharacterised protein family UPF0047 AFERRID_RS09860 PF01713 Smr domain AFERRID_RS09860 PF00488 MutS domain V AFERRID_RS09865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFERRID_RS09865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFERRID_RS09865 PF00205 Thiamine pyrophosphate enzyme, central domain AFERRID_RS09870 PF10369 Small subunit of acetolactate synthase AFERRID_RS09875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AFERRID_RS09875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AFERRID_RS09880 PF02666 Phosphatidylserine decarboxylase AFERRID_RS09885 PF01066 CDP-alcohol phosphatidyltransferase AFERRID_RS09890 PF02887 Pyruvate kinase, alpha/beta domain AFERRID_RS09890 PF00224 Pyruvate kinase, barrel domain AFERRID_RS09895 PF00582 Universal stress protein family AFERRID_RS09900 PF14489 QueF-like protein AFERRID_RS09905 PF06470 SMC proteins Flexible Hinge Domain AFERRID_RS09905 PF02463 RecF/RecN/SMC N terminal domain AFERRID_RS09920 PF03120 NAD-dependent DNA ligase OB-fold domain AFERRID_RS09920 PF00533 BRCA1 C Terminus (BRCT) domain AFERRID_RS09920 PF01653 NAD-dependent DNA ligase adenylation domain AFERRID_RS09920 PF12826 Helix-hairpin-helix motif AFERRID_RS09920 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AFERRID_RS09925 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AFERRID_RS09925 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AFERRID_RS09930 PF08241 Methyltransferase domain AFERRID_RS09945 PF03466 LysR substrate binding domain AFERRID_RS09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS09960 PF01925 Sulfite exporter TauE/SafE AFERRID_RS09965 PF01618 MotA/TolQ/ExbB proton channel family AFERRID_RS09970 PF02472 Biopolymer transport protein ExbD/TolR AFERRID_RS09985 PF01979 Amidohydrolase family AFERRID_RS09990 PF00962 Adenosine/AMP deaminase AFERRID_RS10000 PF01799 [2Fe-2S] binding domain AFERRID_RS10000 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS10000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFERRID_RS10000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFERRID_RS10005 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS10005 PF01799 [2Fe-2S] binding domain AFERRID_RS10010 PF00941 FAD binding domain in molybdopterin dehydrogenase AFERRID_RS10010 PF03450 CO dehydrogenase flavoprotein C-terminal domain AFERRID_RS10020 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) AFERRID_RS10025 PF13478 XdhC Rossmann domain AFERRID_RS10025 PF02625 XdhC and CoxI family AFERRID_RS10035 PF01425 Amidase AFERRID_RS10045 PF12804 MobA-like NTP transferase domain AFERRID_RS10080 PF01522 Polysaccharide deacetylase AFERRID_RS10085 PF04820 Tryptophan halogenase AFERRID_RS10105 PF00999 Sodium/hydrogen exchanger family AFERRID_RS10120 PF02801 Beta-ketoacyl synthase, C-terminal domain AFERRID_RS10120 PF00109 Beta-ketoacyl synthase, N-terminal domain AFERRID_RS10155 PF07977 FabA-like domain AFERRID_RS10195 PF07690 Major Facilitator Superfamily AFERRID_RS10200 PF00654 Voltage gated chloride channel AFERRID_RS10205 PF00654 Voltage gated chloride channel AFERRID_RS10215 PF00403 Heavy-metal-associated domain AFERRID_RS10215 PF00403 Heavy-metal-associated domain AFERRID_RS10235 PF00034 Cytochrome c AFERRID_RS10250 PF00690 Cation transporter/ATPase, N-terminus AFERRID_RS10250 PF00689 Cation transporting ATPase, C-terminus AFERRID_RS10255 PF00140 Sigma-70 factor, region 1.2 AFERRID_RS10255 PF04542 Sigma-70 region 2 AFERRID_RS10255 PF04545 Sigma-70, region 4 AFERRID_RS10255 PF04539 Sigma-70 region 3 AFERRID_RS10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS10265 PF03466 LysR substrate binding domain AFERRID_RS10270 PF00689 Cation transporting ATPase, C-terminus AFERRID_RS10270 PF00690 Cation transporter/ATPase, N-terminus AFERRID_RS10310 PF07690 Major Facilitator Superfamily AFERRID_RS10320 PF00753 Metallo-beta-lactamase superfamily AFERRID_RS10320 PF00581 Rhodanese-like domain AFERRID_RS10330 PF01925 Sulfite exporter TauE/SafE AFERRID_RS10335 PF01329 Pterin 4 alpha carbinolamine dehydratase AFERRID_RS10350 PF08240 Alcohol dehydrogenase GroES-like domain AFERRID_RS10350 PF00107 Zinc-binding dehydrogenase AFERRID_RS10355 PF00117 Glutamine amidotransferase class-I AFERRID_RS10355 PF06418 CTP synthase N-terminus AFERRID_RS10360 PF00793 DAHP synthetase I family AFERRID_RS10365 PF03952 Enolase, N-terminal domain AFERRID_RS10365 PF00113 Enolase, C-terminal TIM barrel domain AFERRID_RS10370 PF04977 Septum formation initiator AFERRID_RS10375 PF01132 Elongation factor P (EF-P) OB domain AFERRID_RS10375 PF08207 Elongation factor P (EF-P) KOW-like domain AFERRID_RS10375 PF09285 Elongation factor P, C-terminal AFERRID_RS10385 PF02151 UvrB/uvrC motif AFERRID_RS10385 PF08459 UvrC Helix-hairpin-helix N-terminal AFERRID_RS10385 PF01541 GIY-YIG catalytic domain AFERRID_RS10390 PF01066 CDP-alcohol phosphatidyltransferase AFERRID_RS10410 PF00072 Response regulator receiver domain AFERRID_RS10410 PF00486 Transcriptional regulatory protein, C terminal AFERRID_RS10420 PF14824 Sirohaem biosynthesis protein central AFERRID_RS10420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFERRID_RS10420 PF10414 Sirohaem synthase dimerisation region AFERRID_RS10425 PF02885 Glycosyl transferase family, helical bundle domain AFERRID_RS10430 PF00384 Molybdopterin oxidoreductase AFERRID_RS10430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFERRID_RS10430 PF01568 Molydopterin dinucleotide binding domain AFERRID_RS10435 PF00355 Rieske [2Fe-2S] domain AFERRID_RS10440 PF18267 Rubredoxin NAD+ reductase C-terminal domain AFERRID_RS10440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS10440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFERRID_RS10440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFERRID_RS10440 PF04324 BFD-like [2Fe-2S] binding domain AFERRID_RS10450 PF07690 Major Facilitator Superfamily AFERRID_RS10455 PF00005 ABC transporter AFERRID_RS10460 PF13545 Crp-like helix-turn-helix domain AFERRID_RS10460 PF00027 Cyclic nucleotide-binding domain AFERRID_RS10465 PF04343 Protein of unknown function, DUF488 AFERRID_RS10470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS10470 PF14759 Reductase C-terminal AFERRID_RS10475 PF00970 Oxidoreductase FAD-binding domain AFERRID_RS10475 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS10475 PF00175 Oxidoreductase NAD-binding domain AFERRID_RS10480 PF00042 Globin AFERRID_RS10480 PF00970 Oxidoreductase FAD-binding domain AFERRID_RS10480 PF00175 Oxidoreductase NAD-binding domain AFERRID_RS10485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFERRID_RS10485 PF00529 HlyD membrane-fusion protein of T1SS AFERRID_RS10490 PF02321 Outer membrane efflux protein AFERRID_RS10495 PF07690 Major Facilitator Superfamily AFERRID_RS10500 PF03466 LysR substrate binding domain AFERRID_RS10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS10550 PF02190 ATP-dependent protease La (LON) substrate-binding domain AFERRID_RS10550 PF05362 Lon protease (S16) C-terminal proteolytic domain AFERRID_RS10550 PF00004 ATPase family associated with various cellular activities (AAA) AFERRID_RS10560 PF10672 S-adenosylmethionine-dependent methyltransferase AFERRID_RS10560 PF17785 PUA-like domain AFERRID_RS10565 PF01008 Initiation factor 2 subunit family AFERRID_RS10570 PF00521 DNA gyrase/topoisomerase IV, subunit A AFERRID_RS10570 PF03989 DNA gyrase C-terminal domain, beta-propeller AFERRID_RS10575 PF01842 ACT domain AFERRID_RS10575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFERRID_RS10575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFERRID_RS10580 PF01842 ACT domain AFERRID_RS10580 PF01817 Chorismate mutase type II AFERRID_RS10580 PF00800 Prephenate dehydratase AFERRID_RS10585 PF00155 Aminotransferase class I and II AFERRID_RS10590 PF18152 DAHP synthase ferredoxin-like domain AFERRID_RS10590 PF00793 DAHP synthetase I family AFERRID_RS10595 PF01842 ACT domain AFERRID_RS10595 PF02153 Prephenate dehydrogenase AFERRID_RS10600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFERRID_RS10605 PF02224 Cytidylate kinase AFERRID_RS10610 PF00575 S1 RNA binding domain AFERRID_RS10615 PF00216 Bacterial DNA-binding protein AFERRID_RS10620 PF18073 Rubredoxin metal binding domain AFERRID_RS10625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AFERRID_RS10630 PF00156 Phosphoribosyl transferase domain AFERRID_RS10635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFERRID_RS10635 PF05698 Bacterial trigger factor protein (TF) C-terminus AFERRID_RS10635 PF05697 Bacterial trigger factor protein (TF) AFERRID_RS10640 PF00574 Clp protease AFERRID_RS10645 PF06689 ClpX C4-type zinc finger AFERRID_RS10645 PF10431 C-terminal, D2-small domain, of ClpB protein AFERRID_RS10645 PF07724 AAA domain (Cdc48 subfamily) AFERRID_RS10650 PF02190 ATP-dependent protease La (LON) substrate-binding domain AFERRID_RS10650 PF05362 Lon protease (S16) C-terminal proteolytic domain AFERRID_RS10650 PF00004 ATPase family associated with various cellular activities (AAA) AFERRID_RS10655 PF00216 Bacterial DNA-binding protein AFERRID_RS10670 PF13145 PPIC-type PPIASE domain AFERRID_RS10700 PF04356 Protein of unknown function (DUF489) AFERRID_RS10705 PF08335 GlnD PII-uridylyltransferase AFERRID_RS10705 PF01966 HD domain AFERRID_RS10705 PF01842 ACT domain AFERRID_RS10705 PF01909 Nucleotidyltransferase domain AFERRID_RS10710 PF00557 Metallopeptidase family M24 AFERRID_RS10715 PF17746 SfsA N-terminal OB domain AFERRID_RS10715 PF03749 Sugar fermentation stimulation protein RE domain AFERRID_RS10720 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFERRID_RS10725 PF00586 AIR synthase related protein, N-terminal domain AFERRID_RS10725 PF02769 AIR synthase related protein, C-terminal domain AFERRID_RS10730 PF04608 Phosphatidylglycerophosphatase A AFERRID_RS10735 PF02464 Competence-damaged protein AFERRID_RS10735 PF00994 Probable molybdopterin binding domain AFERRID_RS10735 PF18146 Damage-inducible protein CinA KH domain AFERRID_RS10740 PF00154 recA bacterial DNA recombination protein AFERRID_RS10745 PF02631 RecX family AFERRID_RS10750 PF02272 DHHA1 domain AFERRID_RS10750 PF01411 tRNA synthetases class II (A) AFERRID_RS10750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFERRID_RS10775 PF00175 Oxidoreductase NAD-binding domain AFERRID_RS10775 PF00970 Oxidoreductase FAD-binding domain AFERRID_RS10775 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS10795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFERRID_RS10795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFERRID_RS10795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFERRID_RS10795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFERRID_RS10810 PF13667 ThiC-associated domain AFERRID_RS10810 PF01964 Radical SAM ThiC family AFERRID_RS10820 PF00732 GMC oxidoreductase AFERRID_RS10820 PF05199 GMC oxidoreductase AFERRID_RS10825 PF00171 Aldehyde dehydrogenase family AFERRID_RS10835 PF02322 Cytochrome bd terminal oxidase subunit II AFERRID_RS10840 PF01654 Cytochrome bd terminal oxidase subunit I AFERRID_RS10850 PF00158 Sigma-54 interaction domain AFERRID_RS10850 PF00072 Response regulator receiver domain AFERRID_RS10850 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS10855 PF02230 Phospholipase/Carboxylesterase AFERRID_RS10860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS10860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFERRID_RS10865 PF04349 Periplasmic glucan biosynthesis protein, MdoG AFERRID_RS10875 PF00535 Glycosyl transferase family 2 AFERRID_RS10885 PF04241 Protein of unknown function (DUF423) AFERRID_RS10895 PF08496 Peptidase family S49 N-terminal AFERRID_RS10895 PF01343 Peptidase family S49 AFERRID_RS10900 PF02597 ThiS family AFERRID_RS10905 PF02391 MoaE protein AFERRID_RS10910 PF04461 Protein of unknown function (DUF520) AFERRID_RS10920 PF08669 Glycine cleavage T-protein C-terminal barrel domain AFERRID_RS10920 PF01571 Aminomethyltransferase folate-binding domain AFERRID_RS10925 PF01597 Glycine cleavage H-protein AFERRID_RS10935 PF02347 Glycine cleavage system P-protein AFERRID_RS10940 PF00005 ABC transporter AFERRID_RS10940 PF00664 ABC transporter transmembrane region AFERRID_RS10945 PF00037 4Fe-4S binding domain AFERRID_RS10945 PF11953 Domain of unknown function (DUF3470) AFERRID_RS10950 PF00578 AhpC/TSA family AFERRID_RS10950 PF10417 C-terminal domain of 1-Cys peroxiredoxin AFERRID_RS10960 PF02811 PHP domain AFERRID_RS10965 PF01594 AI-2E family transporter AFERRID_RS10980 PF00588 SpoU rRNA Methylase family AFERRID_RS10980 PF08032 RNA 2'-O ribose methyltransferase substrate binding AFERRID_RS10985 PF01026 TatD related DNase AFERRID_RS10990 PF03099 Biotin/lipoate A/B protein ligase family AFERRID_RS10990 PF12706 Beta-lactamase superfamily domain AFERRID_RS11005 PF00793 DAHP synthetase I family AFERRID_RS11005 PF18152 DAHP synthase ferredoxin-like domain AFERRID_RS11015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AFERRID_RS11030 PF04264 YceI-like domain AFERRID_RS11040 PF01047 MarR family AFERRID_RS11045 PF01548 Transposase AFERRID_RS11045 PF02371 Transposase IS116/IS110/IS902 family AFERRID_RS11060 PF00005 ABC transporter AFERRID_RS11060 PF00664 ABC transporter transmembrane region AFERRID_RS11070 PF01571 Aminomethyltransferase folate-binding domain AFERRID_RS11080 PF02910 Fumarate reductase flavoprotein C-term AFERRID_RS11080 PF00890 FAD binding domain AFERRID_RS11085 PF04542 Sigma-70 region 2 AFERRID_RS11085 PF08281 Sigma-70, region 4 AFERRID_RS11100 PF06421 GTP-binding protein LepA C-terminus AFERRID_RS11100 PF03144 Elongation factor Tu domain 2 AFERRID_RS11100 PF00009 Elongation factor Tu GTP binding domain AFERRID_RS11100 PF00679 Elongation factor G C-terminus AFERRID_RS11105 PF10502 Signal peptidase, peptidase S26 AFERRID_RS11115 PF14622 Ribonuclease-III-like AFERRID_RS11115 PF00035 Double-stranded RNA binding motif AFERRID_RS11120 PF01926 50S ribosome-binding GTPase AFERRID_RS11120 PF07650 KH domain AFERRID_RS11125 PF11967 Recombination protein O N terminal AFERRID_RS11125 PF02565 Recombination protein O C terminal AFERRID_RS11130 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AFERRID_RS11135 PF01648 4'-phosphopantetheinyl transferase superfamily AFERRID_RS11140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFERRID_RS11140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFERRID_RS11140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFERRID_RS11145 PF00294 pfkB family carbohydrate kinase AFERRID_RS11145 PF01467 Cytidylyltransferase-like AFERRID_RS11150 PF01171 PP-loop family AFERRID_RS11155 PF01430 Hsp33 protein AFERRID_RS11175 PF08463 EcoEI R protein C-terminal AFERRID_RS11175 PF00271 Helicase conserved C-terminal domain AFERRID_RS11175 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AFERRID_RS11175 PF04851 Type III restriction enzyme, res subunit AFERRID_RS11185 PF12161 HsdM N-terminal domain AFERRID_RS11185 PF02384 N-6 DNA Methylase AFERRID_RS11215 PF00534 Glycosyl transferases group 1 AFERRID_RS11215 PF13439 Glycosyltransferase Family 4 AFERRID_RS11220 PF00534 Glycosyl transferases group 1 AFERRID_RS11230 PF00034 Cytochrome c AFERRID_RS11250 PF00271 Helicase conserved C-terminal domain AFERRID_RS11250 PF00270 DEAD/DEAH box helicase AFERRID_RS11255 PF00072 Response regulator receiver domain AFERRID_RS11255 PF00486 Transcriptional regulatory protein, C terminal AFERRID_RS11260 PF00989 PAS fold AFERRID_RS11260 PF00512 His Kinase A (phospho-acceptor) domain AFERRID_RS11260 PF11808 Phosphate regulon sensor protein PhoR AFERRID_RS11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFERRID_RS11265 PF12849 PBP superfamily domain AFERRID_RS11270 PF00528 Binding-protein-dependent transport system inner membrane component AFERRID_RS11275 PF00528 Binding-protein-dependent transport system inner membrane component AFERRID_RS11280 PF00005 ABC transporter AFERRID_RS11285 PF01895 PhoU domain AFERRID_RS11290 PF02541 Ppx/GppA phosphatase family AFERRID_RS11300 PF00318 Ribosomal protein S2 AFERRID_RS11305 PF00889 Elongation factor TS AFERRID_RS11310 PF00696 Amino acid kinase family AFERRID_RS11315 PF01765 Ribosome recycling factor AFERRID_RS11320 PF01255 Putative undecaprenyl diphosphate synthase AFERRID_RS11330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AFERRID_RS11330 PF13288 DXP reductoisomerase C-terminal domain AFERRID_RS11330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AFERRID_RS11335 PF17820 PDZ domain AFERRID_RS11335 PF02163 Peptidase family M50 AFERRID_RS11340 PF01103 Surface antigen AFERRID_RS11340 PF07244 Surface antigen variable number repeat AFERRID_RS11350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AFERRID_RS11350 PF00132 Bacterial transferase hexapeptide (six repeats) AFERRID_RS11355 PF07977 FabA-like domain AFERRID_RS11360 PF00132 Bacterial transferase hexapeptide (six repeats) AFERRID_RS11360 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AFERRID_RS11365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFERRID_RS11365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFERRID_RS11370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFERRID_RS11375 PF02684 Lipid-A-disaccharide synthetase AFERRID_RS11380 PF01351 Ribonuclease HII AFERRID_RS11385 PF01336 OB-fold nucleic acid binding domain AFERRID_RS11385 PF02811 PHP domain AFERRID_RS11385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFERRID_RS11385 PF14579 Helix-hairpin-helix motif AFERRID_RS11385 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFERRID_RS11390 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AFERRID_RS11395 PF01171 PP-loop family AFERRID_RS11395 PF11734 TilS substrate C-terminal domain AFERRID_RS11395 PF09179 TilS substrate binding domain AFERRID_RS11400 PF01979 Amidohydrolase family AFERRID_RS11405 PF01258 Prokaryotic dksA/traR C4-type zinc finger AFERRID_RS11410 PF13419 Haloacid dehalogenase-like hydrolase AFERRID_RS11420 PF00578 AhpC/TSA family AFERRID_RS11425 PF13638 PIN domain AFERRID_RS11425 PF02562 PhoH-like protein AFERRID_RS11430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFERRID_RS11430 PF17944 Arginine decarboxylase C-terminal helical extension AFERRID_RS11430 PF17810 Arginine decarboxylase helical bundle domain AFERRID_RS11440 PF01557 Fumarylacetoacetate (FAA) hydrolase family AFERRID_RS11475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS11480 PF01012 Electron transfer flavoprotein domain AFERRID_RS11480 PF00766 Electron transfer flavoprotein FAD-binding domain AFERRID_RS11485 PF01012 Electron transfer flavoprotein domain AFERRID_RS11510 PF01618 MotA/TolQ/ExbB proton channel family AFERRID_RS11515 PF02472 Biopolymer transport protein ExbD/TolR AFERRID_RS11540 PF01032 FecCD transport family AFERRID_RS11580 PF00581 Rhodanese-like domain AFERRID_RS11590 PF03206 Nitrogen fixation protein NifW AFERRID_RS11595 PF00132 Bacterial transferase hexapeptide (six repeats) AFERRID_RS11600 PF00682 HMGL-like AFERRID_RS11605 PF00266 Aminotransferase class-V AFERRID_RS11610 PF01592 NifU-like N terminal domain AFERRID_RS11610 PF01106 NifU-like domain AFERRID_RS11610 PF04324 BFD-like [2Fe-2S] binding domain AFERRID_RS11615 PF01521 Iron-sulphur cluster biosynthesis AFERRID_RS11625 PF04891 NifQ AFERRID_RS11630 PF12838 4Fe-4S dicluster domain AFERRID_RS11635 PF05082 Rop-like AFERRID_RS11640 PF03270 Protein of unknown function, DUF269 AFERRID_RS11645 PF02579 Dinitrogenase iron-molybdenum cofactor AFERRID_RS11650 PF00148 Nitrogenase component 1 type Oxidoreductase AFERRID_RS11655 PF04324 BFD-like [2Fe-2S] binding domain AFERRID_RS11655 PF00148 Nitrogenase component 1 type Oxidoreductase AFERRID_RS11665 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS11670 PF00148 Nitrogenase component 1 type Oxidoreductase AFERRID_RS11670 PF11844 Domain of unknown function (DUF3364) AFERRID_RS11675 PF00148 Nitrogenase component 1 type Oxidoreductase AFERRID_RS11680 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AFERRID_RS11690 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) AFERRID_RS11695 PF03747 ADP-ribosylglycohydrolase AFERRID_RS11700 PF01590 GAF domain AFERRID_RS11700 PF02954 Bacterial regulatory protein, Fis family AFERRID_RS11700 PF00158 Sigma-54 interaction domain AFERRID_RS11705 PF02579 Dinitrogenase iron-molybdenum cofactor AFERRID_RS11705 PF04055 Radical SAM superfamily AFERRID_RS11710 PF00037 4Fe-4S binding domain AFERRID_RS11715 PF01521 Iron-sulphur cluster biosynthesis AFERRID_RS11730 PF01816 Leucine rich repeat variant AFERRID_RS11730 PF05484 LRV protein FeS4 cluster AFERRID_RS11735 PF04319 NifZ domain AFERRID_RS11745 PF00266 Aminotransferase class-V AFERRID_RS11750 PF06988 NifT/FixU protein AFERRID_RS11760 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFERRID_RS11765 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS11780 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AFERRID_RS11780 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AFERRID_RS11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS11785 PF03459 TOBE domain AFERRID_RS11790 PF00171 Aldehyde dehydrogenase family AFERRID_RS11810 PF00294 pfkB family carbohydrate kinase AFERRID_RS11815 PF00862 Sucrose synthase AFERRID_RS11815 PF00534 Glycosyl transferases group 1 AFERRID_RS11820 PF00862 Sucrose synthase AFERRID_RS11820 PF00534 Glycosyl transferases group 1 AFERRID_RS11825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFERRID_RS11825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFERRID_RS11840 PF00589 Phage integrase family AFERRID_RS11840 PF02899 Phage integrase, N-terminal SAM-like domain AFERRID_RS11870 PF01695 IstB-like ATP binding protein AFERRID_RS11885 PF00436 Single-strand binding protein family AFERRID_RS11905 PF06508 Queuosine biosynthesis protein QueC AFERRID_RS11930 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AFERRID_RS11930 PF04851 Type III restriction enzyme, res subunit AFERRID_RS11930 PF00271 Helicase conserved C-terminal domain AFERRID_RS11930 PF08463 EcoEI R protein C-terminal AFERRID_RS11935 PF01420 Type I restriction modification DNA specificity domain AFERRID_RS11940 PF12161 HsdM N-terminal domain AFERRID_RS11940 PF02384 N-6 DNA Methylase AFERRID_RS11945 PF01850 PIN domain AFERRID_RS11950 PF09957 Bacterial antitoxin of type II TA system, VapB AFERRID_RS11960 PF00216 Bacterial DNA-binding protein AFERRID_RS11965 PF00216 Bacterial DNA-binding protein AFERRID_RS11990 PF04221 RelB antitoxin AFERRID_RS12000 PF13193 AMP-binding enzyme C-terminal domain AFERRID_RS12000 PF00501 AMP-binding enzyme AFERRID_RS12000 PF01553 Acyltransferase AFERRID_RS12075 PF01381 Helix-turn-helix AFERRID_RS12095 PF00437 Type II/IV secretion system protein AFERRID_RS12110 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AFERRID_RS12150 PF13180 PDZ domain AFERRID_RS12160 PF00011 Hsp20/alpha crystallin family AFERRID_RS12170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFERRID_RS12170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFERRID_RS12175 PF00384 Molybdopterin oxidoreductase AFERRID_RS12185 PF02634 FdhD/NarQ family AFERRID_RS12195 PF00111 2Fe-2S iron-sulfur cluster binding domain AFERRID_RS12195 PF00970 Oxidoreductase FAD-binding domain AFERRID_RS12195 PF00175 Oxidoreductase NAD-binding domain AFERRID_RS12200 PF03063 Prismane/CO dehydrogenase family AFERRID_RS12205 PF00027 Cyclic nucleotide-binding domain AFERRID_RS12205 PF13545 Crp-like helix-turn-helix domain AFERRID_RS12215 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AFERRID_RS12220 PF00361 Proton-conducting membrane transporter AFERRID_RS12220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFERRID_RS12225 PF02754 Cysteine-rich domain AFERRID_RS12225 PF13183 4Fe-4S dicluster domain AFERRID_RS12230 PF01565 FAD binding domain AFERRID_RS12235 PF01565 FAD binding domain AFERRID_RS12235 PF02913 FAD linked oxidases, C-terminal domain AFERRID_RS12250 PF01614 Bacterial transcriptional regulator AFERRID_RS12250 PF09339 IclR helix-turn-helix domain AFERRID_RS12270 PF01979 Amidohydrolase family AFERRID_RS12275 PF00920 Dehydratase family AFERRID_RS12280 PF01300 Telomere recombination AFERRID_RS12280 PF03481 Putative GTP-binding controlling metal-binding AFERRID_RS12290 PF01116 Fructose-bisphosphate aldolase class-II AFERRID_RS12300 PF08406 CbbQ/NirQ/NorQ C-terminal AFERRID_RS12300 PF07728 AAA domain (dynein-related subfamily) AFERRID_RS12310 PF13614 AAA domain AFERRID_RS12320 PF00210 Ferritin-like domain AFERRID_RS12325 PF00936 BMC domain AFERRID_RS12330 PF00936 BMC domain AFERRID_RS12335 PF00936 BMC domain AFERRID_RS12345 PF03319 Ethanolamine utilisation protein EutN/carboxysome AFERRID_RS12360 PF00101 Ribulose bisphosphate carboxylase, small chain AFERRID_RS12365 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFERRID_RS12365 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFERRID_RS12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS12370 PF03466 LysR substrate binding domain AFERRID_RS12380 PF04335 VirB8 protein AFERRID_RS12405 PF01464 Transglycosylase SLT domain AFERRID_RS12410 PF02534 Type IV secretory system Conjugative DNA transfer AFERRID_RS12435 PF00563 EAL domain AFERRID_RS12435 PF13188 PAS domain AFERRID_RS12435 PF03707 Bacterial signalling protein N terminal repeat AFERRID_RS12435 PF00990 Diguanylate cyclase, GGDEF domain AFERRID_RS12445 PF00563 EAL domain AFERRID_RS12445 PF03707 Bacterial signalling protein N terminal repeat AFERRID_RS12445 PF00990 Diguanylate cyclase, GGDEF domain AFERRID_RS12475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS12475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFERRID_RS12495 PF00043 Glutathione S-transferase, C-terminal domain AFERRID_RS12495 PF02798 Glutathione S-transferase, N-terminal domain AFERRID_RS12510 PF01638 HxlR-like helix-turn-helix AFERRID_RS12540 PF17762 HTH domain found in ParB protein AFERRID_RS12540 PF02195 ParB-like nuclease domain AFERRID_RS12545 PF13614 AAA domain AFERRID_RS12560 PF00248 Aldo/keto reductase family AFERRID_RS12565 PF03707 Bacterial signalling protein N terminal repeat AFERRID_RS12565 PF00990 Diguanylate cyclase, GGDEF domain AFERRID_RS12565 PF00563 EAL domain AFERRID_RS12625 PF01131 DNA topoisomerase AFERRID_RS12625 PF01751 Toprim domain AFERRID_RS12630 PF13817 IS66 C-terminal element AFERRID_RS12630 PF03050 Transposase IS66 family AFERRID_RS12630 PF13005 zinc-finger binding domain of transposase IS66 AFERRID_RS12630 PF13007 Transposase C of IS166 homeodomain AFERRID_RS12665 PF01695 IstB-like ATP binding protein AFERRID_RS12670 PF00484 Carbonic anhydrase AFERRID_RS12685 PF13817 IS66 C-terminal element AFERRID_RS12685 PF13007 Transposase C of IS166 homeodomain AFERRID_RS12685 PF03050 Transposase IS66 family AFERRID_RS12685 PF13005 zinc-finger binding domain of transposase IS66 AFERRID_RS12715 PF01624 MutS domain I AFERRID_RS12715 PF05190 MutS family domain IV AFERRID_RS12715 PF05192 MutS domain III AFERRID_RS12715 PF05188 MutS domain II AFERRID_RS12715 PF00488 MutS domain V AFERRID_RS12730 PF13439 Glycosyltransferase Family 4 AFERRID_RS12730 PF00534 Glycosyl transferases group 1 AFERRID_RS12735 PF01027 Inhibitor of apoptosis-promoting Bax1 AFERRID_RS12755 PF02913 FAD linked oxidases, C-terminal domain AFERRID_RS12755 PF01565 FAD binding domain AFERRID_RS12760 PF02569 Pantoate-beta-alanine ligase AFERRID_RS12765 PF02548 Ketopantoate hydroxymethyltransferase AFERRID_RS12770 PF01712 Deoxynucleoside kinase AFERRID_RS12775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AFERRID_RS12780 PF12627 Probable RNA and SrmB- binding site of polymerase A AFERRID_RS12780 PF00571 CBS domain AFERRID_RS12780 PF01368 DHH family AFERRID_RS12780 PF02272 DHHA1 domain AFERRID_RS12780 PF01743 Poly A polymerase head domain AFERRID_RS12785 PF12626 Polymerase A arginine-rich C-terminus AFERRID_RS12785 PF12627 Probable RNA and SrmB- binding site of polymerase A AFERRID_RS12785 PF01743 Poly A polymerase head domain AFERRID_RS12790 PF00535 Glycosyl transferase family 2 AFERRID_RS12795 PF00478 IMP dehydrogenase / GMP reductase domain AFERRID_RS12795 PF00571 CBS domain AFERRID_RS12800 PF00958 GMP synthase C terminal domain AFERRID_RS12800 PF02540 NAD synthase AFERRID_RS12800 PF00117 Glutamine amidotransferase class-I AFERRID_RS12850 PF01695 IstB-like ATP binding protein AFERRID_RS12865 PF00436 Single-strand binding protein family AFERRID_RS12880 PF09015 NgoMIV restriction enzyme AFERRID_RS12885 PF00145 C-5 cytosine-specific DNA methylase AFERRID_RS12900 PF01048 Phosphorylase superfamily AFERRID_RS12930 PF00216 Bacterial DNA-binding protein AFERRID_RS12940 PF00216 Bacterial DNA-binding protein AFERRID_RS12950 PF14490 Helix-hairpin-helix containing domain AFERRID_RS12950 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AFERRID_RS12950 PF13538 UvrD-like helicase C-terminal domain AFERRID_RS12965 PF00717 Peptidase S24-like AFERRID_RS12970 PF13438 Domain of unknown function (DUF4113) AFERRID_RS12970 PF00817 impB/mucB/samB family AFERRID_RS12970 PF11799 impB/mucB/samB family C-terminal domain AFERRID_RS12970 PF11798 IMS family HHH motif AFERRID_RS12985 PF00535 Glycosyl transferase family 2 AFERRID_RS13035 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AFERRID_RS13045 PF00216 Bacterial DNA-binding protein AFERRID_RS13050 PF00216 Bacterial DNA-binding protein AFERRID_RS13065 PF01906 Putative heavy-metal-binding AFERRID_RS13080 PF00665 Integrase core domain AFERRID_RS13085 PF01695 IstB-like ATP binding protein AFERRID_RS13115 PF13005 zinc-finger binding domain of transposase IS66 AFERRID_RS13115 PF13007 Transposase C of IS166 homeodomain AFERRID_RS13115 PF13817 IS66 C-terminal element AFERRID_RS13115 PF03050 Transposase IS66 family AFERRID_RS13130 PF08401 Domain of unknown function (DUF1738) AFERRID_RS13130 PF18818 Metallopeptidase superfamily domain AFERRID_RS13130 PF13362 Toprim domain AFERRID_RS13185 PF00437 Type II/IV secretion system protein AFERRID_RS13205 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AFERRID_RS13245 PF03050 Transposase IS66 family AFERRID_RS13245 PF13817 IS66 C-terminal element AFERRID_RS13245 PF13005 zinc-finger binding domain of transposase IS66 AFERRID_RS13245 PF13007 Transposase C of IS166 homeodomain AFERRID_RS13265 PF04335 VirB8 protein AFERRID_RS13295 PF01464 Transglycosylase SLT domain AFERRID_RS13300 PF02534 Type IV secretory system Conjugative DNA transfer AFERRID_RS13350 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS13350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFERRID_RS13370 PF00043 Glutathione S-transferase, C-terminal domain AFERRID_RS13370 PF02798 Glutathione S-transferase, N-terminal domain AFERRID_RS13385 PF01638 HxlR-like helix-turn-helix AFERRID_RS13430 PF02195 ParB-like nuclease domain AFERRID_RS13430 PF17762 HTH domain found in ParB protein AFERRID_RS13435 PF13614 AAA domain AFERRID_RS13485 PF05973 Phage derived protein Gp49-like (DUF891) AFERRID_RS13490 PF01381 Helix-turn-helix AFERRID_RS13505 PF01751 Toprim domain AFERRID_RS13505 PF01131 DNA topoisomerase AFERRID_RS13520 PF01367 5'-3' exonuclease, C-terminal SAM fold AFERRID_RS13520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFERRID_RS13520 PF00476 DNA polymerase family A AFERRID_RS13545 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AFERRID_RS13550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFERRID_RS13560 PF02678 Pirin AFERRID_RS13560 PF17954 Quercetinase C-terminal cupin domain AFERRID_RS13565 PF01638 HxlR-like helix-turn-helix AFERRID_RS13570 PF03358 NADPH-dependent FMN reductase AFERRID_RS13580 PF07681 DoxX AFERRID_RS13595 PF07690 Major Facilitator Superfamily AFERRID_RS13600 PF00582 Universal stress protein family AFERRID_RS13605 PF00106 short chain dehydrogenase AFERRID_RS13610 PF00248 Aldo/keto reductase family AFERRID_RS13640 PF00756 Putative esterase AFERRID_RS13645 PF00107 Zinc-binding dehydrogenase AFERRID_RS13645 PF08240 Alcohol dehydrogenase GroES-like domain AFERRID_RS13650 PF02634 FdhD/NarQ family AFERRID_RS13660 PF00384 Molybdopterin oxidoreductase AFERRID_RS13670 PF00881 Nitroreductase family AFERRID_RS13675 PF00582 Universal stress protein family AFERRID_RS13680 PF07690 Major Facilitator Superfamily AFERRID_RS13720 PF13520 Amino acid permease AFERRID_RS13725 PF01472 PUA domain AFERRID_RS13725 PF00696 Amino acid kinase family AFERRID_RS13730 PF00924 Mechanosensitive ion channel AFERRID_RS13730 PF12795 Mechanosensitive ion channel porin domain AFERRID_RS13730 PF12794 Mechanosensitive ion channel inner membrane domain 1 AFERRID_RS13745 PF01300 Telomere recombination AFERRID_RS13750 PF02163 Peptidase family M50 AFERRID_RS13755 PF00579 tRNA synthetases class I (W and Y) AFERRID_RS13760 PF02616 Segregation and condensation protein ScpA AFERRID_RS13765 PF04079 Segregation and condensation complex subunit ScpB AFERRID_RS13775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS13780 PF00849 RNA pseudouridylate synthase AFERRID_RS13780 PF01479 S4 domain AFERRID_RS13785 PF00730 HhH-GPD superfamily base excision DNA repair protein AFERRID_RS13785 PF10576 Iron-sulfur binding domain of endonuclease III AFERRID_RS13800 PF07690 Major Facilitator Superfamily AFERRID_RS13810 PF00343 Carbohydrate phosphorylase AFERRID_RS13810 PF11897 Protein of unknown function (DUF3417) AFERRID_RS13820 PF02887 Pyruvate kinase, alpha/beta domain AFERRID_RS13820 PF00224 Pyruvate kinase, barrel domain AFERRID_RS13820 PF00391 PEP-utilising enzyme, mobile domain AFERRID_RS13830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFERRID_RS13830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFERRID_RS13840 PF00294 pfkB family carbohydrate kinase AFERRID_RS13845 PF01515 Phosphate acetyl/butaryl transferase AFERRID_RS13850 PF00083 Sugar (and other) transporter AFERRID_RS13855 PF00871 Acetokinase family AFERRID_RS13860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFERRID_RS13860 PF00364 Biotin-requiring enzyme AFERRID_RS13860 PF02817 e3 binding domain AFERRID_RS13865 PF02780 Transketolase, C-terminal domain AFERRID_RS13865 PF02779 Transketolase, pyrimidine binding domain AFERRID_RS13870 PF00676 Dehydrogenase E1 component AFERRID_RS13880 PF01676 Metalloenzyme superfamily AFERRID_RS13880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AFERRID_RS13885 PF00391 PEP-utilising enzyme, mobile domain AFERRID_RS13885 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AFERRID_RS13885 PF02896 PEP-utilising enzyme, TIM barrel domain AFERRID_RS13895 PF05036 Sporulation related domain AFERRID_RS13895 PF03330 Lytic transglycolase AFERRID_RS13900 PF07687 Peptidase dimerisation domain AFERRID_RS13900 PF01546 Peptidase family M20/M25/M40 AFERRID_RS13905 PF00132 Bacterial transferase hexapeptide (six repeats) AFERRID_RS13905 PF14602 Hexapeptide repeat of succinyl-transferase AFERRID_RS13905 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AFERRID_RS13910 PF00155 Aminotransferase class I and II AFERRID_RS13920 PF13419 Haloacid dehalogenase-like hydrolase AFERRID_RS13930 PF01979 Amidohydrolase family AFERRID_RS13940 PF00877 NlpC/P60 family AFERRID_RS13980 PF01850 PIN domain AFERRID_RS13985 PF01420 Type I restriction modification DNA specificity domain AFERRID_RS14020 PF00561 alpha/beta hydrolase fold AFERRID_RS14025 PF00893 Small Multidrug Resistance protein AFERRID_RS14035 PF00583 Acetyltransferase (GNAT) family AFERRID_RS14085 PF03050 Transposase IS66 family AFERRID_RS14085 PF13817 IS66 C-terminal element AFERRID_RS14085 PF13007 Transposase C of IS166 homeodomain AFERRID_RS14085 PF13005 zinc-finger binding domain of transposase IS66 AFERRID_RS14120 PF00717 Peptidase S24-like AFERRID_RS14120 PF01726 LexA DNA binding domain AFERRID_RS14135 PF14579 Helix-hairpin-helix motif AFERRID_RS14135 PF02811 PHP domain AFERRID_RS14135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFERRID_RS14135 PF01336 OB-fold nucleic acid binding domain AFERRID_RS14135 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFERRID_RS14145 PF01433 Peptidase family M1 domain AFERRID_RS14145 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AFERRID_RS14145 PF11940 Domain of unknown function (DUF3458) Ig-like fold AFERRID_RS14160 PF13090 Polyphosphate kinase C-terminal domain 2 AFERRID_RS14160 PF13089 Polyphosphate kinase N-terminal domain AFERRID_RS14160 PF17941 Polyphosphate kinase C-terminal domain 1 AFERRID_RS14160 PF02503 Polyphosphate kinase middle domain AFERRID_RS14170 PF00873 AcrB/AcrD/AcrF family AFERRID_RS14175 PF13533 Biotin-lipoyl like AFERRID_RS14180 PF02321 Outer membrane efflux protein AFERRID_RS14190 PF02545 Maf-like protein AFERRID_RS14195 PF00311 Phosphoenolpyruvate carboxylase AFERRID_RS14200 PF17209 Hfq protein AFERRID_RS14205 PF01926 50S ribosome-binding GTPase AFERRID_RS14205 PF16360 GTP-binding GTPase Middle Region AFERRID_RS14205 PF13167 GTP-binding GTPase N-terminal AFERRID_RS14210 PF01145 SPFH domain / Band 7 family AFERRID_RS14215 PF01145 SPFH domain / Band 7 family AFERRID_RS14225 PF00709 Adenylosuccinate synthetase AFERRID_RS14235 PF08461 Ribonuclease R winged-helix domain AFERRID_RS14235 PF08206 Ribonuclease B OB domain AFERRID_RS14235 PF17876 Cold shock domain AFERRID_RS14235 PF00773 RNB domain AFERRID_RS14240 PF03976 Polyphosphate kinase 2 (PPK2) AFERRID_RS14250 PF00994 Probable molybdopterin binding domain AFERRID_RS14250 PF02464 Competence-damaged protein AFERRID_RS14255 PF00551 Formyl transferase AFERRID_RS14260 PF00586 AIR synthase related protein, N-terminal domain AFERRID_RS14260 PF02769 AIR synthase related protein, C-terminal domain AFERRID_RS14265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AFERRID_RS14265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AFERRID_RS14275 PF00308 Bacterial dnaA protein AFERRID_RS14275 PF08299 Bacterial dnaA protein helix-turn-helix AFERRID_RS14275 PF11638 DnaA N-terminal domain AFERRID_RS14280 PF03631 Virulence factor BrkB AFERRID_RS14290 PF01783 Ribosomal L32p protein family AFERRID_RS14295 PF02504 Fatty acid synthesis protein AFERRID_RS14300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AFERRID_RS14300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFERRID_RS14315 PF00550 Phosphopantetheine attachment site AFERRID_RS14320 PF00109 Beta-ketoacyl synthase, N-terminal domain AFERRID_RS14320 PF02801 Beta-ketoacyl synthase, C-terminal domain AFERRID_RS14330 PF02618 YceG-like family AFERRID_RS14335 PF02223 Thymidylate kinase AFERRID_RS14340 PF09115 DNA polymerase III, delta subunit, C terminal AFERRID_RS14360 PF12170 DNA polymerase III tau subunit V interacting with alpha AFERRID_RS14360 PF12169 DNA polymerase III subunits gamma and tau domain III AFERRID_RS14360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AFERRID_RS14365 PF02575 YbaB/EbfC DNA-binding family AFERRID_RS14370 PF02132 RecR protein AFERRID_RS14370 PF13662 Toprim domain AFERRID_RS14375 PF00909 Ammonium Transporter Family AFERRID_RS14380 PF01256 Carbohydrate kinase AFERRID_RS14380 PF03853 YjeF-related protein N-terminus AFERRID_RS14395 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AFERRID_RS14400 PF01119 DNA mismatch repair protein, C-terminal domain AFERRID_RS14400 PF08676 MutL C terminal dimerisation domain AFERRID_RS14410 PF00334 Nucleoside diphosphate kinase AFERRID_RS14415 PF04055 Radical SAM superfamily AFERRID_RS14425 PF13464 Domain of unknown function (DUF4115) AFERRID_RS14430 PF04551 GcpE protein AFERRID_RS14435 PF03129 Anticodon binding domain AFERRID_RS14435 PF13393 Histidyl-tRNA synthetase AFERRID_RS14465 PF12849 PBP superfamily domain AFERRID_RS14470 PF00528 Binding-protein-dependent transport system inner membrane component AFERRID_RS14475 PF00528 Binding-protein-dependent transport system inner membrane component AFERRID_RS14490 PF01925 Sulfite exporter TauE/SafE AFERRID_RS14585 PF00873 AcrB/AcrD/AcrF family AFERRID_RS14600 PF01161 Phosphatidylethanolamine-binding protein AFERRID_RS14605 PF00037 4Fe-4S binding domain AFERRID_RS14605 PF11953 Domain of unknown function (DUF3470) AFERRID_RS14615 PF03595 Voltage-dependent anion channel AFERRID_RS14630 PF00535 Glycosyl transferase family 2 AFERRID_RS14655 PF00732 GMC oxidoreductase AFERRID_RS14655 PF05199 GMC oxidoreductase AFERRID_RS14665 PF09137 Glucodextranase, domain N AFERRID_RS14665 PF00723 Glycosyl hydrolases family 15 AFERRID_RS14685 PF01266 FAD dependent oxidoreductase AFERRID_RS14695 PF17243 POTRA domain TamA domain 1 AFERRID_RS14695 PF01103 Surface antigen AFERRID_RS14695 PF07244 Surface antigen variable number repeat AFERRID_RS14715 PF00034 Cytochrome c AFERRID_RS14735 PF01370 NAD dependent epimerase/dehydratase family AFERRID_RS14740 PF01370 NAD dependent epimerase/dehydratase family AFERRID_RS14745 PF00999 Sodium/hydrogen exchanger family AFERRID_RS14745 PF02080 TrkA-C domain AFERRID_RS14745 PF02254 TrkA-N domain AFERRID_RS14750 PF16177 Acetyl-coenzyme A synthetase N-terminus AFERRID_RS14750 PF13193 AMP-binding enzyme C-terminal domain AFERRID_RS14750 PF00501 AMP-binding enzyme AFERRID_RS14755 PF10431 C-terminal, D2-small domain, of ClpB protein AFERRID_RS14755 PF02861 Clp amino terminal domain, pathogenicity island component AFERRID_RS14755 PF17871 AAA lid domain AFERRID_RS14755 PF00004 ATPase family associated with various cellular activities (AAA) AFERRID_RS14755 PF07724 AAA domain (Cdc48 subfamily) AFERRID_RS14765 PF01264 Chorismate synthase AFERRID_RS14770 PF02649 Type I GTP cyclohydrolase folE2 AFERRID_RS14775 PF02780 Transketolase, C-terminal domain AFERRID_RS14775 PF02779 Transketolase, pyrimidine binding domain AFERRID_RS14775 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AFERRID_RS14780 PF00348 Polyprenyl synthetase AFERRID_RS14785 PF02609 Exonuclease VII small subunit AFERRID_RS14790 PF07690 Major Facilitator Superfamily AFERRID_RS14800 PF00085 Thioredoxin AFERRID_RS14805 PF02601 Exonuclease VII, large subunit AFERRID_RS14805 PF13742 OB-fold nucleic acid binding domain AFERRID_RS14810 PF01011 PQQ enzyme repeat AFERRID_RS14810 PF13360 PQQ-like domain AFERRID_RS14810 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AFERRID_RS14820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AFERRID_RS14825 PF00149 Calcineurin-like phosphoesterase AFERRID_RS14830 PF00690 Cation transporter/ATPase, N-terminus AFERRID_RS14830 PF00689 Cation transporting ATPase, C-terminus AFERRID_RS14835 PF08502 LeuA allosteric (dimerisation) domain AFERRID_RS14835 PF00682 HMGL-like AFERRID_RS14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFERRID_RS14855 PF03466 LysR substrate binding domain AFERRID_RS14860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AFERRID_RS14870 PF00196 Bacterial regulatory proteins, luxR family AFERRID_RS14870 PF03472 Autoinducer binding domain AFERRID_RS14880 PF00765 Autoinducer synthase AFERRID_RS14920 PF17074 Darcynin, domain of unknown function AFERRID_RS14925 PF01047 MarR family AFERRID_RS14930 PF02627 Carboxymuconolactone decarboxylase family AFERRID_RS14970 PF00403 Heavy-metal-associated domain AFERRID_RS14975 PF00155 Aminotransferase class I and II AFERRID_RS14980 PF01370 NAD dependent epimerase/dehydratase family AFERRID_RS14980 PF02222 ATP-grasp domain AFERRID_RS14990 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AFERRID_RS14990 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AFERRID_RS14995 PF01022 Bacterial regulatory protein, arsR family AFERRID_RS15000 PF01207 Dihydrouridine synthase (Dus) AFERRID_RS15005 PF00589 Phage integrase family AFERRID_RS15015 PF03743 Bacterial conjugation TrbI-like protein AFERRID_RS15020 PF03524 Conjugal transfer protein AFERRID_RS15040 PF04610 TrbL/VirB6 plasmid conjugal transfer protein