locus-tag class description AFE_RS00005 PF02767 DNA polymerase III beta subunit, central domain AFE_RS00005 PF02768 DNA polymerase III beta subunit, C-terminal domain AFE_RS00005 PF00712 DNA polymerase III beta subunit, N-terminal domain AFE_RS00010 PF02463 RecF/RecN/SMC N terminal domain AFE_RS00015 PF00204 DNA gyrase B AFE_RS00015 PF01751 Toprim domain AFE_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS00015 PF18053 DNA gyrase B subunit insert domain AFE_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus AFE_RS00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS00045 PF03776 Septum formation topological specificity factor MinE AFE_RS00055 PF03776 Septum formation topological specificity factor MinE AFE_RS00060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AFE_RS00065 PF03775 Septum formation inhibitor MinC, C-terminal domain AFE_RS00065 PF05209 Septum formation inhibitor MinC, N-terminal domain AFE_RS00070 PF00037 4Fe-4S binding domain AFE_RS00070 PF11953 Domain of unknown function (DUF3470) AFE_RS00075 PF13368 Topoisomerase C-terminal repeat AFE_RS00075 PF01751 Toprim domain AFE_RS00075 PF01131 DNA topoisomerase AFE_RS00080 PF04361 Protein of unknown function (DUF494) AFE_RS00085 PF17782 DprA winged helix domain AFE_RS00085 PF02481 DNA recombination-mediator protein A AFE_RS00095 PF01327 Polypeptide deformylase AFE_RS00100 PF02911 Formyl transferase, C-terminal domain AFE_RS00100 PF00551 Formyl transferase AFE_RS00105 PF01029 NusB family AFE_RS00105 PF01189 16S rRNA methyltransferase RsmB/F AFE_RS00115 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS00115 PF00672 HAMP domain AFE_RS00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS00115 PF00989 PAS fold AFE_RS00120 PF02954 Bacterial regulatory protein, Fis family AFE_RS00120 PF00072 Response regulator receiver domain AFE_RS00120 PF00158 Sigma-54 interaction domain AFE_RS00125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS00125 PF00989 PAS fold AFE_RS00125 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS00130 PF00072 Response regulator receiver domain AFE_RS00130 PF00158 Sigma-54 interaction domain AFE_RS00130 PF02954 Bacterial regulatory protein, Fis family AFE_RS00135 PF13360 PQQ-like domain AFE_RS00135 PF13570 PQQ-like domain AFE_RS00135 PF01011 PQQ enzyme repeat AFE_RS00145 PF10396 GTP-binding protein TrmE N-terminus AFE_RS00145 PF12631 MnmE helical domain AFE_RS00145 PF01926 50S ribosome-binding GTPase AFE_RS00150 PF14849 YidC periplasmic domain AFE_RS00150 PF02096 60Kd inner membrane protein AFE_RS00155 PF01809 Putative membrane protein insertion efficiency factor AFE_RS00160 PF00825 Ribonuclease P AFE_RS00165 PF00468 Ribosomal protein L34 AFE_RS00170 PF00005 ABC transporter AFE_RS00170 PF12848 ABC transporter AFE_RS00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS00175 PF03466 LysR substrate binding domain AFE_RS00180 PF00529 HlyD membrane-fusion protein of T1SS AFE_RS00180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS00190 PF07690 Major Facilitator Superfamily AFE_RS00260 PF01914 MarC family integral membrane protein AFE_RS00270 PF01336 OB-fold nucleic acid binding domain AFE_RS00270 PF02938 GAD domain AFE_RS00270 PF00152 tRNA synthetases class II (D, K and N) AFE_RS00275 PF02445 Quinolinate synthetase A protein AFE_RS00285 PF01709 Transcriptional regulator AFE_RS00290 PF02075 Crossover junction endodeoxyribonuclease RuvC AFE_RS00295 PF01330 RuvA N terminal domain AFE_RS00295 PF07499 RuvA, C-terminal domain AFE_RS00300 PF05491 RuvB C-terminal winged helix domain AFE_RS00300 PF17864 RuvB AAA lid domain AFE_RS00300 PF05496 Holliday junction DNA helicase RuvB P-loop domain AFE_RS00305 PF03061 Thioesterase superfamily AFE_RS00310 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS00315 PF02472 Biopolymer transport protein ExbD/TolR AFE_RS00325 PF04052 TolB amino-terminal domain AFE_RS00325 PF07676 WD40-like Beta Propeller Repeat AFE_RS00330 PF06508 Queuosine biosynthesis protein QueC AFE_RS00335 PF04055 Radical SAM superfamily AFE_RS00345 PF00691 OmpA family AFE_RS00355 PF02397 Bacterial sugar transferase AFE_RS00370 PF01943 Polysaccharide biosynthesis protein AFE_RS00370 PF14667 Polysaccharide biosynthesis C-terminal domain AFE_RS00375 PF01209 ubiE/COQ5 methyltransferase family AFE_RS00385 PF00534 Glycosyl transferases group 1 AFE_RS00395 PF00534 Glycosyl transferases group 1 AFE_RS00395 PF13439 Glycosyltransferase Family 4 AFE_RS00400 PF00535 Glycosyl transferase family 2 AFE_RS00405 PF00534 Glycosyl transferases group 1 AFE_RS00405 PF13439 Glycosyltransferase Family 4 AFE_RS00450 PF02661 Fic/DOC family AFE_RS00450 PF13784 Fic/DOC family N-terminal AFE_RS00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS00495 PF00005 ABC transporter AFE_RS00510 PF01566 Natural resistance-associated macrophage protein AFE_RS00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS00515 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS00515 PF00672 HAMP domain AFE_RS00520 PF00486 Transcriptional regulatory protein, C terminal AFE_RS00520 PF00072 Response regulator receiver domain AFE_RS00530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS00550 PF07859 alpha/beta hydrolase fold AFE_RS00575 PF04305 Protein of unknown function (DUF455) AFE_RS00580 PF00814 Glycoprotease family AFE_RS00590 PF02660 Glycerol-3-phosphate acyltransferase AFE_RS00595 PF02152 Dihydroneopterin aldolase AFE_RS00600 PF04055 Radical SAM superfamily AFE_RS00600 PF18693 TRAM domain AFE_RS00600 PF00919 Uncharacterized protein family UPF0004 AFE_RS00625 PF06969 HemN C-terminal domain AFE_RS00625 PF04055 Radical SAM superfamily AFE_RS00630 PF03466 LysR substrate binding domain AFE_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS00640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AFE_RS00650 PF02913 FAD linked oxidases, C-terminal domain AFE_RS00650 PF01565 FAD binding domain AFE_RS00655 PF13580 SIS domain AFE_RS00660 PF02021 Uncharacterised protein family UPF0102 AFE_RS00665 PF04348 LppC putative lipoprotein AFE_RS00670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFE_RS00700 PF04241 Protein of unknown function (DUF423) AFE_RS00710 PF00230 Major intrinsic protein AFE_RS00720 PF17284 Spermidine synthase tetramerisation domain AFE_RS00725 PF02675 S-adenosylmethionine decarboxylase AFE_RS00730 PF00005 ABC transporter AFE_RS00735 PF02405 Permease MlaE AFE_RS00740 PF02470 MlaD protein AFE_RS00755 PF00005 ABC transporter AFE_RS00760 PF01479 S4 domain AFE_RS00765 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AFE_RS00775 PF00398 Ribosomal RNA adenine dimethylase AFE_RS00790 PF03485 Arginyl tRNA synthetase N terminal domain AFE_RS00790 PF05746 DALR anticodon binding domain AFE_RS00790 PF00750 tRNA synthetases class I (R) AFE_RS00795 PF07690 Major Facilitator Superfamily AFE_RS00800 PF03466 LysR substrate binding domain AFE_RS00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS00805 PF05175 Methyltransferase small domain AFE_RS00810 PF03372 Endonuclease/Exonuclease/phosphatase family AFE_RS00820 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AFE_RS00825 PF13417 Glutathione S-transferase, N-terminal domain AFE_RS00825 PF00043 Glutathione S-transferase, C-terminal domain AFE_RS00830 PF03372 Endonuclease/Exonuclease/phosphatase family AFE_RS00835 PF00762 Ferrochelatase AFE_RS00840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFE_RS00845 PF03702 Anhydro-N-acetylmuramic acid kinase AFE_RS00850 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AFE_RS00850 PF01488 Shikimate / quinate 5-dehydrogenase AFE_RS00850 PF08501 Shikimate dehydrogenase substrate binding domain AFE_RS00855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AFE_RS00855 PF00437 Type II/IV secretion system protein AFE_RS00860 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS00865 PF00158 Sigma-54 interaction domain AFE_RS00865 PF00072 Response regulator receiver domain AFE_RS00865 PF02954 Bacterial regulatory protein, Fis family AFE_RS00870 PF01478 Type IV leader peptidase family AFE_RS00870 PF06750 Bacterial Peptidase A24 N-terminal domain AFE_RS00875 PF01121 Dephospho-CoA kinase AFE_RS00880 PF07072 Cell division protein AFE_RS00885 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AFE_RS00895 PF10145 Phage-related minor tail protein AFE_RS00895 PF01464 Transglycosylase SLT domain AFE_RS00895 PF01551 Peptidase family M23 AFE_RS00900 PF02954 Bacterial regulatory protein, Fis family AFE_RS00915 PF02785 Biotin carboxylase C-terminal domain AFE_RS00915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFE_RS00915 PF00289 Biotin carboxylase, N-terminal domain AFE_RS00920 PF00364 Biotin-requiring enzyme AFE_RS00925 PF01220 Dehydroquinase class II AFE_RS00940 PF00091 Tubulin/FtsZ family, GTPase domain AFE_RS00940 PF12327 FtsZ family, C-terminal domain AFE_RS00945 PF02491 SHS2 domain inserted in FTSA AFE_RS00950 PF03799 Cell division protein FtsQ AFE_RS00950 PF08478 POTRA domain, FtsQ-type AFE_RS00955 PF01820 D-ala D-ala ligase N-terminus AFE_RS00955 PF07478 D-ala D-ala ligase C-terminus AFE_RS00960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AFE_RS00960 PF01565 FAD binding domain AFE_RS00965 PF08245 Mur ligase middle domain AFE_RS00965 PF01225 Mur ligase family, catalytic domain AFE_RS00965 PF02875 Mur ligase family, glutamate ligase domain AFE_RS00970 PF03033 Glycosyltransferase family 28 N-terminal domain AFE_RS00970 PF04101 Glycosyltransferase family 28 C-terminal domain AFE_RS00975 PF01098 Cell cycle protein AFE_RS00980 PF08245 Mur ligase middle domain AFE_RS00980 PF02875 Mur ligase family, glutamate ligase domain AFE_RS00985 PF00953 Glycosyl transferase family 4 AFE_RS00985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AFE_RS00990 PF08245 Mur ligase middle domain AFE_RS00990 PF01225 Mur ligase family, catalytic domain AFE_RS00990 PF02875 Mur ligase family, glutamate ligase domain AFE_RS00995 PF08245 Mur ligase middle domain AFE_RS00995 PF01225 Mur ligase family, catalytic domain AFE_RS00995 PF02875 Mur ligase family, glutamate ligase domain AFE_RS01000 PF00905 Penicillin binding protein transpeptidase domain AFE_RS01000 PF03717 Penicillin-binding Protein dimerisation domain AFE_RS01010 PF01795 MraW methylase family AFE_RS01015 PF02381 MraZ protein, putative antitoxin-like AFE_RS01020 PF01743 Poly A polymerase head domain AFE_RS01020 PF13735 tRNA nucleotidyltransferase domain 2 putative AFE_RS01020 PF12627 Probable RNA and SrmB- binding site of polymerase A AFE_RS01025 PF00501 AMP-binding enzyme AFE_RS01030 PF00043 Glutathione S-transferase, C-terminal domain AFE_RS01030 PF02798 Glutathione S-transferase, N-terminal domain AFE_RS01035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AFE_RS01045 PF07517 SecA DEAD-like domain AFE_RS01045 PF07516 SecA Wing and Scaffold domain AFE_RS01045 PF02810 SEC-C motif AFE_RS01045 PF01043 SecA preprotein cross-linking domain AFE_RS01050 PF01960 ArgJ family AFE_RS01055 PF00293 NUDIX domain AFE_RS01060 PF00535 Glycosyl transferase family 2 AFE_RS01070 PF13439 Glycosyltransferase Family 4 AFE_RS01070 PF00534 Glycosyl transferases group 1 AFE_RS01075 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AFE_RS01090 PF00535 Glycosyl transferase family 2 AFE_RS01095 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AFE_RS01105 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AFE_RS01110 PF03279 Bacterial lipid A biosynthesis acyltransferase AFE_RS01115 PF00155 Aminotransferase class I and II AFE_RS01120 PF03781 Sulfatase-modifying factor enzyme 1 AFE_RS01120 PF12867 DinB superfamily AFE_RS01125 PF00588 SpoU rRNA Methylase family AFE_RS01130 PF00156 Phosphoribosyl transferase domain AFE_RS01135 PF00155 Aminotransferase class I and II AFE_RS01140 PF00561 alpha/beta hydrolase fold AFE_RS01145 PF08241 Methyltransferase domain AFE_RS01155 PF01435 Peptidase family M48 AFE_RS01160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AFE_RS01165 PF04377 Arginine-tRNA-protein transferase, C terminus AFE_RS01165 PF04376 Arginine-tRNA-protein transferase, N terminus AFE_RS01170 PF03649 Uncharacterised protein family (UPF0014) AFE_RS01175 PF00929 Exonuclease AFE_RS01180 PF00175 Oxidoreductase NAD-binding domain AFE_RS01180 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS01180 PF00970 Oxidoreductase FAD-binding domain AFE_RS01200 PF00440 Bacterial regulatory proteins, tetR family AFE_RS01205 PF00696 Amino acid kinase family AFE_RS01210 PF00529 HlyD membrane-fusion protein of T1SS AFE_RS01210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS01220 PF04055 Radical SAM superfamily AFE_RS01220 PF06968 Biotin and Thiamin Synthesis associated domain AFE_RS01225 PF02594 Uncharacterised ACR, YggU family COG1872 AFE_RS01230 PF02325 YGGT family AFE_RS01235 PF03807 NADP oxidoreductase coenzyme F420-dependent AFE_RS01235 PF14748 Pyrroline-5-carboxylate reductase dimerisation AFE_RS01240 PF01168 Alanine racemase, N-terminal domain AFE_RS01245 PF00437 Type II/IV secretion system protein AFE_RS01250 PF00437 Type II/IV secretion system protein AFE_RS01255 PF00535 Glycosyl transferase family 2 AFE_RS01270 PF00753 Metallo-beta-lactamase superfamily AFE_RS01275 PF13545 Crp-like helix-turn-helix domain AFE_RS01275 PF00027 Cyclic nucleotide-binding domain AFE_RS01280 PF02390 Putative methyltransferase AFE_RS01285 PF00731 AIR carboxylase AFE_RS01290 PF02222 ATP-grasp domain AFE_RS01290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AFE_RS01305 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AFE_RS01310 PF01668 SmpB protein AFE_RS01315 PF13396 Phospholipase_D-nuclease N-terminal AFE_RS01315 PF13091 PLD-like domain AFE_RS01320 PF03364 Polyketide cyclase / dehydrase and lipid transport AFE_RS01325 PF04355 SmpA / OmlA family AFE_RS01330 PF01475 Ferric uptake regulator family AFE_RS01335 PF00696 Amino acid kinase family AFE_RS01335 PF01472 PUA domain AFE_RS01340 PF01018 GTP1/OBG AFE_RS01340 PF01926 50S ribosome-binding GTPase AFE_RS01345 PF01016 Ribosomal L27 protein AFE_RS01350 PF00829 Ribosomal prokaryotic L21 protein AFE_RS01355 PF01740 STAS domain AFE_RS01355 PF00916 Sulfate permease family AFE_RS01360 PF00484 Carbonic anhydrase AFE_RS01365 PF08267 Cobalamin-independent synthase, N-terminal domain AFE_RS01365 PF01717 Cobalamin-independent synthase, Catalytic domain AFE_RS01370 PF01209 ubiE/COQ5 methyltransferase family AFE_RS01380 PF07021 Methionine biosynthesis protein MetW AFE_RS01380 PF00561 alpha/beta hydrolase fold AFE_RS01385 PF00561 alpha/beta hydrolase fold AFE_RS01395 PF00464 Serine hydroxymethyltransferase AFE_RS01400 PF03477 ATP cone domain AFE_RS01405 PF01872 RibD C-terminal domain AFE_RS01405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFE_RS01410 PF00677 Lumazine binding domain AFE_RS01415 PF00925 GTP cyclohydrolase II AFE_RS01415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AFE_RS01420 PF00885 6,7-dimethyl-8-ribityllumazine synthase AFE_RS01425 PF01029 NusB family AFE_RS01445 PF03109 ABC1 family AFE_RS01450 PF04972 BON domain AFE_RS01450 PF00691 OmpA family AFE_RS01470 PF03144 Elongation factor Tu domain 2 AFE_RS01470 PF00009 Elongation factor Tu GTP binding domain AFE_RS01470 PF03143 Elongation factor Tu C-terminal domain AFE_RS01485 PF00467 KOW motif AFE_RS01485 PF02357 Transcription termination factor nusG AFE_RS01490 PF00298 Ribosomal protein L11, RNA binding domain AFE_RS01490 PF03946 Ribosomal protein L11, N-terminal domain AFE_RS01495 PF00687 Ribosomal protein L1p/L10e family AFE_RS01500 PF00466 Ribosomal protein L10 AFE_RS01505 PF16320 Ribosomal protein L7/L12 dimerisation domain AFE_RS01505 PF00542 Ribosomal protein L7/L12 C-terminal domain AFE_RS01510 PF04563 RNA polymerase beta subunit AFE_RS01510 PF04560 RNA polymerase Rpb2, domain 7 AFE_RS01510 PF10385 RNA polymerase beta subunit external 1 domain AFE_RS01510 PF04565 RNA polymerase Rpb2, domain 3 AFE_RS01510 PF04561 RNA polymerase Rpb2, domain 2 AFE_RS01510 PF00562 RNA polymerase Rpb2, domain 6 AFE_RS01515 PF00623 RNA polymerase Rpb1, domain 2 AFE_RS01515 PF04983 RNA polymerase Rpb1, domain 3 AFE_RS01515 PF05000 RNA polymerase Rpb1, domain 4 AFE_RS01515 PF04998 RNA polymerase Rpb1, domain 5 AFE_RS01515 PF04997 RNA polymerase Rpb1, domain 1 AFE_RS01520 PF00164 Ribosomal protein S12/S23 AFE_RS01525 PF00177 Ribosomal protein S7p/S5e AFE_RS01530 PF03144 Elongation factor Tu domain 2 AFE_RS01530 PF00009 Elongation factor Tu GTP binding domain AFE_RS01530 PF00679 Elongation factor G C-terminus AFE_RS01530 PF03764 Elongation factor G, domain IV AFE_RS01530 PF14492 Elongation Factor G, domain II AFE_RS01535 PF00009 Elongation factor Tu GTP binding domain AFE_RS01535 PF03144 Elongation factor Tu domain 2 AFE_RS01535 PF03143 Elongation factor Tu C-terminal domain AFE_RS01540 PF00338 Ribosomal protein S10p/S20e AFE_RS01545 PF00297 Ribosomal protein L3 AFE_RS01550 PF00573 Ribosomal protein L4/L1 family AFE_RS01555 PF00276 Ribosomal protein L23 AFE_RS01560 PF03947 Ribosomal Proteins L2, C-terminal domain AFE_RS01560 PF00181 Ribosomal Proteins L2, RNA binding domain AFE_RS01565 PF00203 Ribosomal protein S19 AFE_RS01570 PF00237 Ribosomal protein L22p/L17e AFE_RS01575 PF07650 KH domain AFE_RS01575 PF00189 Ribosomal protein S3, C-terminal domain AFE_RS01580 PF00252 Ribosomal protein L16p/L10e AFE_RS01585 PF00831 Ribosomal L29 protein AFE_RS01590 PF00366 Ribosomal protein S17 AFE_RS01595 PF00238 Ribosomal protein L14p/L23e AFE_RS01600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AFE_RS01600 PF00467 KOW motif AFE_RS01605 PF00281 Ribosomal protein L5 AFE_RS01605 PF00673 ribosomal L5P family C-terminus AFE_RS01610 PF00410 Ribosomal protein S8 AFE_RS01615 PF00347 Ribosomal protein L6 AFE_RS01620 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AFE_RS01625 PF03719 Ribosomal protein S5, C-terminal domain AFE_RS01625 PF00333 Ribosomal protein S5, N-terminal domain AFE_RS01630 PF00327 Ribosomal protein L30p/L7e AFE_RS01635 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AFE_RS01640 PF00344 SecY translocase AFE_RS01645 PF05191 Adenylate kinase, active site lid AFE_RS01650 PF01176 Translation initiation factor 1A / IF-1 AFE_RS01655 PF00416 Ribosomal protein S13/S18 AFE_RS01660 PF00411 Ribosomal protein S11 AFE_RS01665 PF00163 Ribosomal protein S4/S9 N-terminal domain AFE_RS01665 PF01479 S4 domain AFE_RS01670 PF01000 RNA polymerase Rpb3/RpoA insert domain AFE_RS01670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AFE_RS01670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AFE_RS01675 PF01196 Ribosomal protein L17 AFE_RS01680 PF00692 dUTPase AFE_RS01685 PF02441 Flavoprotein AFE_RS01685 PF04127 DNA / pantothenate metabolism flavoprotein AFE_RS01690 PF04002 RadC-like JAB domain AFE_RS01700 PF01569 PAP2 superfamily AFE_RS01720 PF00156 Phosphoribosyl transferase domain AFE_RS01725 PF01048 Phosphorylase superfamily AFE_RS01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS01730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFE_RS01735 PF00462 Glutaredoxin AFE_RS01735 PF08534 Redoxin AFE_RS01740 PF18429 Domain of unknown function (DUF5609) AFE_RS01745 PF17757 UvrB interaction domain AFE_RS01745 PF02559 CarD-like/TRCF domain AFE_RS01745 PF00270 DEAD/DEAH box helicase AFE_RS01745 PF00271 Helicase conserved C-terminal domain AFE_RS01745 PF03461 TRCF domain AFE_RS01750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AFE_RS01755 PF02542 YgbB family AFE_RS01760 PF01142 tRNA pseudouridine synthase D (TruD) AFE_RS01765 PF09278 MerR, DNA binding AFE_RS01765 PF00376 MerR family regulatory protein AFE_RS01775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS01785 PF03548 Outer membrane lipoprotein carrier protein LolA AFE_RS01795 PF00004 ATPase family associated with various cellular activities (AAA) AFE_RS01795 PF16193 AAA C-terminal domain AFE_RS01795 PF12002 MgsA AAA+ ATPase C terminal AFE_RS01800 PF02403 Seryl-tRNA synthetase N-terminal domain AFE_RS01800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFE_RS01810 PF17969 L,D-transpeptidase C-terminal domain AFE_RS01810 PF03734 L,D-transpeptidase catalytic domain AFE_RS01845 PF17384 RimP C-terminal SH3 domain AFE_RS01845 PF02576 RimP N-terminal domain AFE_RS01850 PF08529 NusA N-terminal domain AFE_RS01850 PF00575 S1 RNA binding domain AFE_RS01850 PF13184 NusA-like KH domain AFE_RS01855 PF11987 Translation-initiation factor 2 AFE_RS01855 PF04760 Translation initiation factor IF-2, N-terminal region AFE_RS01855 PF08364 Bacterial translation initiation factor IF-2 associated region AFE_RS01855 PF00009 Elongation factor Tu GTP binding domain AFE_RS01860 PF02033 Ribosome-binding factor A AFE_RS01865 PF16198 tRNA pseudouridylate synthase B C-terminal domain AFE_RS01865 PF09157 Pseudouridine synthase II TruB, C-terminal AFE_RS01865 PF01509 TruB family pseudouridylate synthase (N terminal domain) AFE_RS01870 PF00312 Ribosomal protein S15 AFE_RS01875 PF01138 3' exoribonuclease family, domain 1 AFE_RS01875 PF00013 KH domain AFE_RS01875 PF03725 3' exoribonuclease family, domain 2 AFE_RS01875 PF00575 S1 RNA binding domain AFE_RS01875 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AFE_RS01880 PF00675 Insulinase (Peptidase family M16) AFE_RS01880 PF05193 Peptidase M16 inactive domain AFE_RS01885 PF00753 Metallo-beta-lactamase superfamily AFE_RS01885 PF16123 Hydroxyacylglutathione hydrolase C-terminus AFE_RS01890 PF01209 ubiE/COQ5 methyltransferase family AFE_RS01895 PF00075 RNase H AFE_RS01900 PF00929 Exonuclease AFE_RS01910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFE_RS01920 PF00764 Arginosuccinate synthase AFE_RS01925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFE_RS01925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFE_RS01930 PF00202 Aminotransferase class-III AFE_RS01935 PF13840 ACT domain AFE_RS01935 PF01842 ACT domain AFE_RS01935 PF00696 Amino acid kinase family AFE_RS01965 PF07963 Prokaryotic N-terminal methylation motif AFE_RS01965 PF00114 Pilin (bacterial filament) AFE_RS01975 PF00923 Transaldolase/Fructose-6-phosphate aldolase AFE_RS01985 PF01476 LysM domain AFE_RS01985 PF01464 Transglycosylase SLT domain AFE_RS01990 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFE_RS01995 PF00330 Aconitase family (aconitate hydratase) AFE_RS02000 PF00180 Isocitrate/isopropylmalate dehydrogenase AFE_RS02005 PF00549 CoA-ligase AFE_RS02005 PF08442 ATP-grasp domain AFE_RS02015 PF02629 CoA binding domain AFE_RS02015 PF00549 CoA-ligase AFE_RS02020 PF02540 NAD synthase AFE_RS02020 PF00795 Carbon-nitrogen hydrolase AFE_RS02025 PF00543 Nitrogen regulatory protein P-II AFE_RS02030 PF13525 Outer membrane lipoprotein AFE_RS02035 PF01479 S4 domain AFE_RS02035 PF00849 RNA pseudouridylate synthase AFE_RS02040 PF02578 Multi-copper polyphenol oxidoreductase laccase AFE_RS02045 PF03079 ARD/ARD' family AFE_RS02050 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFE_RS02050 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFE_RS02060 PF00596 Class II Aldolase and Adducin N-terminal domain AFE_RS02070 PF01327 Polypeptide deformylase AFE_RS02075 PF13520 Amino acid permease AFE_RS02080 PF16363 GDP-mannose 4,6 dehydratase AFE_RS02085 PF04321 RmlD substrate binding domain AFE_RS02100 PF00483 Nucleotidyl transferase AFE_RS02110 PF00158 Sigma-54 interaction domain AFE_RS02110 PF00072 Response regulator receiver domain AFE_RS02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS02120 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS02125 PF02463 RecF/RecN/SMC N terminal domain AFE_RS02130 PF01513 ATP-NAD kinase AFE_RS02135 PF03309 Type III pantothenate kinase AFE_RS02140 PF03099 Biotin/lipoate A/B protein ligase family AFE_RS02140 PF08279 HTH domain AFE_RS02140 PF02237 Biotin protein ligase C terminal domain AFE_RS02145 PF00171 Aldehyde dehydrogenase family AFE_RS02155 PF06144 DNA polymerase III, delta subunit AFE_RS02155 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AFE_RS02165 PF00133 tRNA synthetases class I (I, L, M and V) AFE_RS02165 PF13603 Leucyl-tRNA synthetase, Domain 2 AFE_RS02165 PF08264 Anticodon-binding domain of tRNA AFE_RS02170 PF03358 NADPH-dependent FMN reductase AFE_RS02175 PF04264 YceI-like domain AFE_RS02180 PF01427 D-ala-D-ala dipeptidase AFE_RS02185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFE_RS02185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFE_RS02185 PF06827 Zinc finger found in FPG and IleRS AFE_RS02195 PF16916 Dimerisation domain of Zinc Transporter AFE_RS02195 PF01545 Cation efflux family AFE_RS02200 PF03951 Glutamine synthetase, beta-Grasp domain AFE_RS02200 PF00120 Glutamine synthetase, catalytic domain AFE_RS02210 PF01975 Survival protein SurE AFE_RS02220 PF04545 Sigma-70, region 4 AFE_RS02220 PF04542 Sigma-70 region 2 AFE_RS02220 PF04539 Sigma-70 region 3 AFE_RS02220 PF00140 Sigma-70 factor, region 1.2 AFE_RS02225 PF04430 Protein of unknown function (DUF498/DUF598) AFE_RS02230 PF00155 Aminotransferase class I and II AFE_RS02235 PF03447 Homoserine dehydrogenase, NAD binding domain AFE_RS02235 PF01842 ACT domain AFE_RS02235 PF00742 Homoserine dehydrogenase AFE_RS02240 PF00291 Pyridoxal-phosphate dependent enzyme AFE_RS02250 PF02272 DHHA1 domain AFE_RS02250 PF01368 DHH family AFE_RS02250 PF17768 RecJ OB domain AFE_RS02255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AFE_RS02260 PF01850 PIN domain AFE_RS02265 PF03462 PCRF domain AFE_RS02265 PF00472 RF-1 domain AFE_RS02270 PF00152 tRNA synthetases class II (D, K and N) AFE_RS02270 PF01336 OB-fold nucleic acid binding domain AFE_RS02275 PF02687 FtsX-like permease family AFE_RS02275 PF12704 MacB-like periplasmic core domain AFE_RS02280 PF00005 ABC transporter AFE_RS02290 PF03772 Competence protein AFE_RS02290 PF00753 Metallo-beta-lactamase superfamily AFE_RS02295 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS02300 PF02472 Biopolymer transport protein ExbD/TolR AFE_RS02315 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AFE_RS02320 PF03966 Trm112p-like protein AFE_RS02325 PF02348 Cytidylyltransferase AFE_RS02330 PF00719 Inorganic pyrophosphatase AFE_RS02340 PF00589 Phage integrase family AFE_RS02340 PF13495 Phage integrase, N-terminal SAM-like domain AFE_RS02350 PF00132 Bacterial transferase hexapeptide (six repeats) AFE_RS02375 PF03992 Antibiotic biosynthesis monooxygenase AFE_RS02395 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS02395 PF00589 Phage integrase family AFE_RS02400 PF00589 Phage integrase family AFE_RS02400 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS02410 PF01471 Putative peptidoglycan binding domain AFE_RS02410 PF13401 AAA domain AFE_RS02435 PF03167 Uracil DNA glycosylase superfamily AFE_RS02440 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AFE_RS02445 PF02861 Clp amino terminal domain, pathogenicity island component AFE_RS02445 PF07724 AAA domain (Cdc48 subfamily) AFE_RS02445 PF17871 AAA lid domain AFE_RS02445 PF10431 C-terminal, D2-small domain, of ClpB protein AFE_RS02445 PF00004 ATPase family associated with various cellular activities (AAA) AFE_RS02450 PF02617 ATP-dependent Clp protease adaptor protein ClpS AFE_RS02460 PF01965 DJ-1/PfpI family AFE_RS02465 PF03572 Peptidase family S41 AFE_RS02465 PF13180 PDZ domain AFE_RS02475 PF01676 Metalloenzyme superfamily AFE_RS02475 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AFE_RS02480 PF00343 Carbohydrate phosphorylase AFE_RS02490 PF00581 Rhodanese-like domain AFE_RS02495 PF00294 pfkB family carbohydrate kinase AFE_RS02505 PF02773 S-adenosylmethionine synthetase, C-terminal domain AFE_RS02505 PF00438 S-adenosylmethionine synthetase, N-terminal domain AFE_RS02505 PF02772 S-adenosylmethionine synthetase, central domain AFE_RS02510 PF05221 S-adenosyl-L-homocysteine hydrolase AFE_RS02510 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AFE_RS02515 PF02219 Methylenetetrahydrofolate reductase AFE_RS02520 PF00485 Phosphoribulokinase / Uridine kinase family AFE_RS02535 PF14306 PUA-like domain AFE_RS02535 PF01747 ATP-sulfurylase AFE_RS02540 PF00156 Phosphoribosyl transferase domain AFE_RS02545 PF00118 TCP-1/cpn60 chaperonin family AFE_RS02550 PF00166 Chaperonin 10 Kd subunit AFE_RS02560 PF11412 Disulphide bond corrector protein DsbC AFE_RS02560 PF02683 Cytochrome C biogenesis protein transmembrane region AFE_RS02570 PF01063 Amino-transferase class IV AFE_RS02575 PF08335 GlnD PII-uridylyltransferase AFE_RS02575 PF03710 Glutamate-ammonia ligase adenylyltransferase AFE_RS02590 PF00795 Carbon-nitrogen hydrolase AFE_RS02595 PF00005 ABC transporter AFE_RS02595 PF06472 ABC transporter transmembrane region 2 AFE_RS02610 PF01252 Signal peptidase (SPase) II AFE_RS02615 PF00133 tRNA synthetases class I (I, L, M and V) AFE_RS02615 PF06827 Zinc finger found in FPG and IleRS AFE_RS02615 PF08264 Anticodon-binding domain of tRNA AFE_RS02620 PF01687 Riboflavin kinase AFE_RS02620 PF06574 FAD synthetase AFE_RS02630 PF03023 Lipid II flippase MurJ AFE_RS02640 PF08340 Domain of unknown function (DUF1732) AFE_RS02640 PF03755 YicC-like family, N-terminal region AFE_RS02645 PF00625 Guanylate kinase AFE_RS02650 PF01192 RNA polymerase Rpb6 AFE_RS02655 PF02824 TGS domain AFE_RS02655 PF04607 Region found in RelA / SpoT proteins AFE_RS02655 PF13291 ACT domain AFE_RS02660 PF01042 Endoribonuclease L-PSP AFE_RS02670 PF00270 DEAD/DEAH box helicase AFE_RS02670 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AFE_RS02670 PF17191 RecG wedge domain AFE_RS02680 PF01593 Flavin containing amine oxidoreductase AFE_RS02685 PF01594 AI-2E family transporter AFE_RS02690 PF01875 Memo-like protein AFE_RS02695 PF01871 AMMECR1 AFE_RS02700 PF04055 Radical SAM superfamily AFE_RS02705 PF02321 Outer membrane efflux protein AFE_RS02710 PF04715 Anthranilate synthase component I, N terminal region AFE_RS02710 PF00425 chorismate binding enzyme AFE_RS02765 PF03880 DbpA RNA binding domain AFE_RS02765 PF00271 Helicase conserved C-terminal domain AFE_RS02765 PF00270 DEAD/DEAH box helicase AFE_RS02770 PF00313 'Cold-shock' DNA-binding domain AFE_RS02775 PF00270 DEAD/DEAH box helicase AFE_RS02775 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AFE_RS02775 PF18074 Primosomal protein N C-terminal domain AFE_RS02775 PF17764 3′ DNA-binding domain (3′BD) AFE_RS02775 PF00271 Helicase conserved C-terminal domain AFE_RS02780 PF01040 UbiA prenyltransferase family AFE_RS02790 PF00398 Ribosomal RNA adenine dimethylase AFE_RS02800 PF00919 Uncharacterized protein family UPF0004 AFE_RS02800 PF01938 TRAM domain AFE_RS02800 PF04055 Radical SAM superfamily AFE_RS02805 PF02562 PhoH-like protein AFE_RS02810 PF02130 Uncharacterized protein family UPF0054 AFE_RS02815 PF03471 Transporter associated domain AFE_RS02815 PF00571 CBS domain AFE_RS02820 PF00795 Carbon-nitrogen hydrolase AFE_RS02825 PF01523 Putative modulator of DNA gyrase AFE_RS02835 PF00005 ABC transporter AFE_RS02845 PF00950 ABC 3 transport family AFE_RS02860 PF01370 NAD dependent epimerase/dehydratase family AFE_RS02890 PF00534 Glycosyl transferases group 1 AFE_RS02890 PF13439 Glycosyltransferase Family 4 AFE_RS02895 PF00534 Glycosyl transferases group 1 AFE_RS02895 PF13439 Glycosyltransferase Family 4 AFE_RS02900 PF00005 ABC transporter AFE_RS02900 PF00664 ABC transporter transmembrane region AFE_RS02905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFE_RS02905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFE_RS02905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFE_RS02915 PF00300 Histidine phosphatase superfamily (branch 1) AFE_RS02915 PF13456 Reverse transcriptase-like AFE_RS02930 PF08241 Methyltransferase domain AFE_RS02935 PF00330 Aconitase family (aconitate hydratase) AFE_RS02940 PF00694 Aconitase C-terminal domain AFE_RS02950 PF01243 Pyridoxamine 5'-phosphate oxidase AFE_RS02950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AFE_RS02955 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AFE_RS02970 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AFE_RS02970 PF06481 COX Aromatic Rich Motif AFE_RS02975 PF00115 Cytochrome C and Quinol oxidase polypeptide I AFE_RS02980 PF00510 Cytochrome c oxidase subunit III AFE_RS02990 PF01040 UbiA prenyltransferase family AFE_RS02995 PF07690 Major Facilitator Superfamily AFE_RS03000 PF02673 Bacitracin resistance protein BacA AFE_RS03005 PF01272 Transcription elongation factor, GreA/GreB, C-term AFE_RS03005 PF03449 Transcription elongation factor, N-terminal AFE_RS03010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AFE_RS03010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFE_RS03010 PF02142 MGS-like domain AFE_RS03015 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AFE_RS03015 PF00117 Glutamine amidotransferase class-I AFE_RS03025 PF05690 Thiazole biosynthesis protein ThiG AFE_RS03025 PF02597 ThiS family AFE_RS03030 PF05690 Thiazole biosynthesis protein ThiG AFE_RS03040 PF08245 Mur ligase middle domain AFE_RS03040 PF02875 Mur ligase family, glutamate ligase domain AFE_RS03040 PF01225 Mur ligase family, catalytic domain AFE_RS03045 PF02441 Flavoprotein AFE_RS03050 PF00005 ABC transporter AFE_RS03055 PF02405 Permease MlaE AFE_RS03075 PF00899 ThiF family AFE_RS03085 PF12704 MacB-like periplasmic core domain AFE_RS03085 PF02687 FtsX-like permease family AFE_RS03090 PF00005 ABC transporter AFE_RS03100 PF00085 Thioredoxin AFE_RS03105 PF07497 Rho termination factor, RNA-binding domain AFE_RS03105 PF07498 Rho termination factor, N-terminal domain AFE_RS03105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFE_RS03110 PF01197 Ribosomal protein L31 AFE_RS03115 PF00390 Malic enzyme, N-terminal domain AFE_RS03115 PF03949 Malic enzyme, NAD binding domain AFE_RS03120 PF01594 AI-2E family transporter AFE_RS03125 PF00920 Dehydratase family AFE_RS03135 PF00696 Amino acid kinase family AFE_RS03135 PF00583 Acetyltransferase (GNAT) family AFE_RS03140 PF01722 BolA-like protein AFE_RS03145 PF03795 YCII-related domain AFE_RS03150 PF04279 Intracellular septation protein A AFE_RS03160 PF00459 Inositol monophosphatase family AFE_RS03165 PF00588 SpoU rRNA Methylase family AFE_RS03170 PF00132 Bacterial transferase hexapeptide (six repeats) AFE_RS03175 PF02082 Transcriptional regulator AFE_RS03180 PF00266 Aminotransferase class-V AFE_RS03185 PF01592 NifU-like N terminal domain AFE_RS03190 PF01521 Iron-sulphur cluster biosynthesis AFE_RS03195 PF07743 HSCB C-terminal oligomerisation domain AFE_RS03200 PF00012 Hsp70 protein AFE_RS03205 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS03210 PF04384 Iron-sulphur cluster assembly AFE_RS03220 PF01734 Patatin-like phospholipase AFE_RS03230 PF04851 Type III restriction enzyme, res subunit AFE_RS03230 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AFE_RS03230 PF08463 EcoEI R protein C-terminal AFE_RS03230 PF00271 Helicase conserved C-terminal domain AFE_RS03235 PF02384 N-6 DNA Methylase AFE_RS03235 PF12161 HsdM N-terminal domain AFE_RS03245 PF01420 Type I restriction modification DNA specificity domain AFE_RS03265 PF02634 FdhD/NarQ family AFE_RS03275 PF01568 Molydopterin dinucleotide binding domain AFE_RS03275 PF00384 Molybdopterin oxidoreductase AFE_RS03280 PF01590 GAF domain AFE_RS03280 PF02954 Bacterial regulatory protein, Fis family AFE_RS03280 PF00158 Sigma-54 interaction domain AFE_RS03290 PF04828 Glutathione-dependent formaldehyde-activating enzyme AFE_RS03295 PF00107 Zinc-binding dehydrogenase AFE_RS03295 PF08240 Alcohol dehydrogenase GroES-like domain AFE_RS03300 PF00756 Putative esterase AFE_RS03305 PF03466 LysR substrate binding domain AFE_RS03305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS03310 PF00158 Sigma-54 interaction domain AFE_RS03310 PF02954 Bacterial regulatory protein, Fis family AFE_RS03310 PF00072 Response regulator receiver domain AFE_RS03320 PF00374 Nickel-dependent hydrogenase AFE_RS03360 PF01106 NifU-like domain AFE_RS03370 PF00708 Acylphosphatase AFE_RS03370 PF07503 HypF finger AFE_RS03370 PF17788 HypF Kae1-like domain AFE_RS03370 PF01300 Telomere recombination AFE_RS03375 PF01455 HupF/HypC family AFE_RS03380 PF13580 SIS domain AFE_RS03385 PF01924 Hydrogenase formation hypA family AFE_RS03390 PF00586 AIR synthase related protein, N-terminal domain AFE_RS03390 PF02769 AIR synthase related protein, C-terminal domain AFE_RS03395 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AFE_RS03400 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFE_RS03410 PF01266 FAD dependent oxidoreductase AFE_RS03420 PF00291 Pyridoxal-phosphate dependent enzyme AFE_RS03420 PF00585 C-terminal regulatory domain of Threonine dehydratase AFE_RS03445 PF01553 Acyltransferase AFE_RS03450 PF01208 Uroporphyrinogen decarboxylase (URO-D) AFE_RS03455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS03455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AFE_RS03460 PF01493 GXGXG motif AFE_RS03460 PF00310 Glutamine amidotransferases class-II AFE_RS03460 PF04898 Glutamate synthase central domain AFE_RS03460 PF01645 Conserved region in glutamate synthase AFE_RS03465 PF01966 HD domain AFE_RS03465 PF13286 Phosphohydrolase-associated domain AFE_RS03470 PF02511 Thymidylate synthase complementing protein AFE_RS03475 PF01761 3-dehydroquinate synthase AFE_RS03480 PF01202 Shikimate kinase AFE_RS03485 PF00263 Bacterial type II and III secretion system protein AFE_RS03485 PF07660 Secretin and TonB N terminus short domain AFE_RS03485 PF03958 Bacterial type II/III secretion system short domain AFE_RS03485 PF11741 AMIN domain AFE_RS03505 PF11104 Type IV pilus assembly protein PilM; AFE_RS03510 PF14437 MafB19-like deaminase AFE_RS03515 PF01894 Uncharacterised protein family UPF0047 AFE_RS03525 PF01713 Smr domain AFE_RS03525 PF00488 MutS domain V AFE_RS03530 PF00205 Thiamine pyrophosphate enzyme, central domain AFE_RS03530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFE_RS03530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFE_RS03535 PF10369 Small subunit of acetolactate synthase AFE_RS03540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AFE_RS03540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AFE_RS03545 PF02666 Phosphatidylserine decarboxylase AFE_RS03550 PF01066 CDP-alcohol phosphatidyltransferase AFE_RS03555 PF02887 Pyruvate kinase, alpha/beta domain AFE_RS03555 PF00224 Pyruvate kinase, barrel domain AFE_RS03560 PF00582 Universal stress protein family AFE_RS03565 PF14489 QueF-like protein AFE_RS03570 PF02463 RecF/RecN/SMC N terminal domain AFE_RS03570 PF06470 SMC proteins Flexible Hinge Domain AFE_RS03585 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AFE_RS03585 PF01653 NAD-dependent DNA ligase adenylation domain AFE_RS03585 PF00533 BRCA1 C Terminus (BRCT) domain AFE_RS03585 PF03120 NAD-dependent DNA ligase OB-fold domain AFE_RS03585 PF12826 Helix-hairpin-helix motif AFE_RS03590 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AFE_RS03590 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AFE_RS03595 PF08241 Methyltransferase domain AFE_RS03605 PF03466 LysR substrate binding domain AFE_RS03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS03615 PF01925 Sulfite exporter TauE/SafE AFE_RS03620 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS03625 PF02472 Biopolymer transport protein ExbD/TolR AFE_RS03640 PF01979 Amidohydrolase family AFE_RS03645 PF00962 Adenosine/AMP deaminase AFE_RS03655 PF01799 [2Fe-2S] binding domain AFE_RS03655 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS03655 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFE_RS03655 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFE_RS03660 PF01799 [2Fe-2S] binding domain AFE_RS03660 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS03675 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) AFE_RS03680 PF02625 XdhC and CoxI family AFE_RS03680 PF13478 XdhC Rossmann domain AFE_RS03690 PF01425 Amidase AFE_RS03715 PF01522 Polysaccharide deacetylase AFE_RS03720 PF04820 Tryptophan halogenase AFE_RS03740 PF00999 Sodium/hydrogen exchanger family AFE_RS03760 PF02801 Beta-ketoacyl synthase, C-terminal domain AFE_RS03760 PF00109 Beta-ketoacyl synthase, N-terminal domain AFE_RS03820 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFE_RS03820 PF01799 [2Fe-2S] binding domain AFE_RS03820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFE_RS03825 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS03825 PF01799 [2Fe-2S] binding domain AFE_RS03835 PF07690 Major Facilitator Superfamily AFE_RS03840 PF00654 Voltage gated chloride channel AFE_RS03845 PF00654 Voltage gated chloride channel AFE_RS03850 PF03466 LysR substrate binding domain AFE_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS03855 PF00690 Cation transporter/ATPase, N-terminus AFE_RS03855 PF00689 Cation transporting ATPase, C-terminus AFE_RS03880 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AFE_RS03880 PF00270 DEAD/DEAH box helicase AFE_RS03880 PF17191 RecG wedge domain AFE_RS03905 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS03905 PF00589 Phage integrase family AFE_RS03910 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS03910 PF00589 Phage integrase family AFE_RS03925 PF13401 AAA domain AFE_RS03925 PF01471 Putative peptidoglycan binding domain AFE_RS03940 PF11867 Domain of unknown function (DUF3387) AFE_RS03940 PF18766 SWI2/SNF2 ATPase AFE_RS03940 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AFE_RS03955 PF00271 Helicase conserved C-terminal domain AFE_RS03955 PF12344 Ultra-violet resistance protein B AFE_RS03955 PF04851 Type III restriction enzyme, res subunit AFE_RS03955 PF02151 UvrB/uvrC motif AFE_RS03955 PF17757 UvrB interaction domain AFE_RS03960 PF08240 Alcohol dehydrogenase GroES-like domain AFE_RS03960 PF00107 Zinc-binding dehydrogenase AFE_RS03965 PF00117 Glutamine amidotransferase class-I AFE_RS03965 PF06418 CTP synthase N-terminus AFE_RS03970 PF00793 DAHP synthetase I family AFE_RS03975 PF00113 Enolase, C-terminal TIM barrel domain AFE_RS03975 PF03952 Enolase, N-terminal domain AFE_RS03980 PF04977 Septum formation initiator AFE_RS03985 PF09285 Elongation factor P, C-terminal AFE_RS03985 PF01132 Elongation factor P (EF-P) OB domain AFE_RS03985 PF08207 Elongation factor P (EF-P) KOW-like domain AFE_RS03995 PF08459 UvrC Helix-hairpin-helix N-terminal AFE_RS03995 PF01541 GIY-YIG catalytic domain AFE_RS03995 PF02151 UvrB/uvrC motif AFE_RS04000 PF01066 CDP-alcohol phosphatidyltransferase AFE_RS04015 PF00027 Cyclic nucleotide-binding domain AFE_RS04015 PF13545 Crp-like helix-turn-helix domain AFE_RS04020 PF04343 Protein of unknown function, DUF488 AFE_RS04025 PF14759 Reductase C-terminal AFE_RS04025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS04030 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS04030 PF00970 Oxidoreductase FAD-binding domain AFE_RS04030 PF00175 Oxidoreductase NAD-binding domain AFE_RS04035 PF00970 Oxidoreductase FAD-binding domain AFE_RS04035 PF00042 Globin AFE_RS04035 PF00175 Oxidoreductase NAD-binding domain AFE_RS04040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS04040 PF00529 HlyD membrane-fusion protein of T1SS AFE_RS04045 PF02321 Outer membrane efflux protein AFE_RS04050 PF07690 Major Facilitator Superfamily AFE_RS04055 PF03466 LysR substrate binding domain AFE_RS04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS04080 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AFE_RS04095 PF02190 ATP-dependent protease La (LON) substrate-binding domain AFE_RS04095 PF00004 ATPase family associated with various cellular activities (AAA) AFE_RS04095 PF05362 Lon protease (S16) C-terminal proteolytic domain AFE_RS04120 PF00583 Acetyltransferase (GNAT) family AFE_RS04130 PF03466 LysR substrate binding domain AFE_RS04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS04145 PF01593 Flavin containing amine oxidoreductase AFE_RS04155 PF00155 Aminotransferase class I and II AFE_RS04165 PF01906 Putative heavy-metal-binding AFE_RS04175 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AFE_RS04185 PF10672 S-adenosylmethionine-dependent methyltransferase AFE_RS04185 PF17785 PUA-like domain AFE_RS04190 PF01008 Initiation factor 2 subunit family AFE_RS04195 PF03989 DNA gyrase C-terminal domain, beta-propeller AFE_RS04195 PF00521 DNA gyrase/topoisomerase IV, subunit A AFE_RS04200 PF00266 Aminotransferase class-V AFE_RS04205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFE_RS04205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFE_RS04205 PF01842 ACT domain AFE_RS04210 PF00800 Prephenate dehydratase AFE_RS04210 PF01817 Chorismate mutase type II AFE_RS04210 PF01842 ACT domain AFE_RS04215 PF00155 Aminotransferase class I and II AFE_RS04220 PF00793 DAHP synthetase I family AFE_RS04220 PF18152 DAHP synthase ferredoxin-like domain AFE_RS04225 PF02153 Prephenate dehydrogenase AFE_RS04225 PF01842 ACT domain AFE_RS04230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFE_RS04235 PF02224 Cytidylate kinase AFE_RS04240 PF00575 S1 RNA binding domain AFE_RS04245 PF00216 Bacterial DNA-binding protein AFE_RS04250 PF18073 Rubredoxin metal binding domain AFE_RS04255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AFE_RS04260 PF00156 Phosphoribosyl transferase domain AFE_RS04265 PF05697 Bacterial trigger factor protein (TF) AFE_RS04265 PF05698 Bacterial trigger factor protein (TF) C-terminus AFE_RS04265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFE_RS04270 PF00574 Clp protease AFE_RS04275 PF06689 ClpX C4-type zinc finger AFE_RS04275 PF07724 AAA domain (Cdc48 subfamily) AFE_RS04275 PF10431 C-terminal, D2-small domain, of ClpB protein AFE_RS04280 PF05362 Lon protease (S16) C-terminal proteolytic domain AFE_RS04280 PF00004 ATPase family associated with various cellular activities (AAA) AFE_RS04280 PF02190 ATP-dependent protease La (LON) substrate-binding domain AFE_RS04285 PF00216 Bacterial DNA-binding protein AFE_RS04300 PF13145 PPIC-type PPIASE domain AFE_RS04305 PF01569 PAP2 superfamily AFE_RS04325 PF07690 Major Facilitator Superfamily AFE_RS04330 PF04356 Protein of unknown function (DUF489) AFE_RS04335 PF08335 GlnD PII-uridylyltransferase AFE_RS04335 PF01966 HD domain AFE_RS04335 PF01909 Nucleotidyltransferase domain AFE_RS04335 PF01842 ACT domain AFE_RS04340 PF00557 Metallopeptidase family M24 AFE_RS04345 PF17746 SfsA N-terminal OB domain AFE_RS04345 PF03749 Sugar fermentation stimulation protein RE domain AFE_RS04350 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFE_RS04355 PF00586 AIR synthase related protein, N-terminal domain AFE_RS04355 PF02769 AIR synthase related protein, C-terminal domain AFE_RS04360 PF04608 Phosphatidylglycerophosphatase A AFE_RS04365 PF18146 Damage-inducible protein CinA KH domain AFE_RS04365 PF00994 Probable molybdopterin binding domain AFE_RS04365 PF02464 Competence-damaged protein AFE_RS04370 PF00154 recA bacterial DNA recombination protein AFE_RS04375 PF02631 RecX family AFE_RS04380 PF02272 DHHA1 domain AFE_RS04380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFE_RS04380 PF01411 tRNA synthetases class II (A) AFE_RS04405 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS04405 PF00970 Oxidoreductase FAD-binding domain AFE_RS04405 PF00175 Oxidoreductase NAD-binding domain AFE_RS04415 PF01464 Transglycosylase SLT domain AFE_RS04415 PF10145 Phage-related minor tail protein AFE_RS04415 PF01551 Peptidase family M23 AFE_RS04420 PF12419 SNF2 Helicase protein AFE_RS04420 PF00271 Helicase conserved C-terminal domain AFE_RS04420 PF00176 SNF2 family N-terminal domain AFE_RS04425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFE_RS04425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFE_RS04425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFE_RS04425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFE_RS04435 PF00005 ABC transporter AFE_RS04435 PF12848 ABC transporter AFE_RS04440 PF13667 ThiC-associated domain AFE_RS04440 PF01964 Radical SAM ThiC family AFE_RS04450 PF00732 GMC oxidoreductase AFE_RS04450 PF05199 GMC oxidoreductase AFE_RS04455 PF00171 Aldehyde dehydrogenase family AFE_RS04465 PF02322 Cytochrome bd terminal oxidase subunit II AFE_RS04470 PF01654 Cytochrome bd terminal oxidase subunit I AFE_RS04480 PF02954 Bacterial regulatory protein, Fis family AFE_RS04480 PF00072 Response regulator receiver domain AFE_RS04480 PF00158 Sigma-54 interaction domain AFE_RS04485 PF02230 Phospholipase/Carboxylesterase AFE_RS04490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFE_RS04490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS04495 PF04349 Periplasmic glucan biosynthesis protein, MdoG AFE_RS04505 PF00535 Glycosyl transferase family 2 AFE_RS04515 PF04241 Protein of unknown function (DUF423) AFE_RS04555 PF00482 Type II secretion system (T2SS), protein F AFE_RS04560 PF08496 Peptidase family S49 N-terminal AFE_RS04560 PF01343 Peptidase family S49 AFE_RS04565 PF02597 ThiS family AFE_RS04570 PF02391 MoaE protein AFE_RS04575 PF04461 Protein of unknown function (DUF520) AFE_RS04585 PF01571 Aminomethyltransferase folate-binding domain AFE_RS04585 PF08669 Glycine cleavage T-protein C-terminal barrel domain AFE_RS04590 PF01597 Glycine cleavage H-protein AFE_RS04595 PF02347 Glycine cleavage system P-protein AFE_RS04600 PF02347 Glycine cleavage system P-protein AFE_RS04605 PF00664 ABC transporter transmembrane region AFE_RS04605 PF00005 ABC transporter AFE_RS04610 PF00037 4Fe-4S binding domain AFE_RS04610 PF11953 Domain of unknown function (DUF3470) AFE_RS04615 PF00578 AhpC/TSA family AFE_RS04615 PF10417 C-terminal domain of 1-Cys peroxiredoxin AFE_RS04625 PF02811 PHP domain AFE_RS04630 PF01594 AI-2E family transporter AFE_RS04645 PF00588 SpoU rRNA Methylase family AFE_RS04645 PF08032 RNA 2'-O ribose methyltransferase substrate binding AFE_RS04650 PF01026 TatD related DNase AFE_RS04655 PF12706 Beta-lactamase superfamily domain AFE_RS04655 PF03099 Biotin/lipoate A/B protein ligase family AFE_RS04665 PF00589 Phage integrase family AFE_RS04745 PF01131 DNA topoisomerase AFE_RS04745 PF01751 Toprim domain AFE_RS04745 PF01396 Topoisomerase DNA binding C4 zinc finger AFE_RS04760 PF02600 Disulfide bond formation protein DsbB AFE_RS04795 PF02163 Peptidase family M50 AFE_RS04835 PF00239 Resolvase, N terminal domain AFE_RS04905 PF14490 Helix-hairpin-helix containing domain AFE_RS04905 PF13538 UvrD-like helicase C-terminal domain AFE_RS04905 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AFE_RS04955 PF01385 Probable transposase AFE_RS04955 PF07282 Putative transposase DNA-binding domain AFE_RS04955 PF12323 Helix-turn-helix domain AFE_RS05010 PF00216 Bacterial DNA-binding protein AFE_RS05100 PF00437 Type II/IV secretion system protein AFE_RS05120 PF10502 Signal peptidase, peptidase S26 AFE_RS05155 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AFE_RS05180 PF00239 Resolvase, N terminal domain AFE_RS05240 PF01435 Peptidase family M48 AFE_RS05245 PF00149 Calcineurin-like phosphoesterase AFE_RS05360 PF00580 UvrD/REP helicase N-terminal domain AFE_RS05360 PF13361 UvrD-like helicase C-terminal domain AFE_RS05400 PF00589 Phage integrase family AFE_RS05400 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS05675 PF00075 RNase H AFE_RS05685 PF08721 TnsA endonuclease C terminal AFE_RS05685 PF08722 TnsA endonuclease N terminal AFE_RS05690 PF00665 Integrase core domain AFE_RS05695 PF13401 AAA domain AFE_RS05695 PF11426 Tn7 transposition regulator TnsC AFE_RS05735 PF13181 Tetratricopeptide repeat AFE_RS05755 PF12323 Helix-turn-helix domain AFE_RS05755 PF01385 Probable transposase AFE_RS05755 PF07282 Putative transposase DNA-binding domain AFE_RS05825 PF00533 BRCA1 C Terminus (BRCT) domain AFE_RS05825 PF01653 NAD-dependent DNA ligase adenylation domain AFE_RS05825 PF03120 NAD-dependent DNA ligase OB-fold domain AFE_RS05885 PF00216 Bacterial DNA-binding protein AFE_RS05970 PF00436 Single-strand binding protein family AFE_RS06125 PF00158 Sigma-54 interaction domain AFE_RS06125 PF00072 Response regulator receiver domain AFE_RS06125 PF02954 Bacterial regulatory protein, Fis family AFE_RS06130 PF03466 LysR substrate binding domain AFE_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS06220 PF01906 Putative heavy-metal-binding AFE_RS06255 PF00872 Transposase, Mutator family AFE_RS06280 PF01569 PAP2 superfamily AFE_RS06285 PF02563 Polysaccharide biosynthesis/export protein AFE_RS06285 PF10531 SLBB domain AFE_RS06290 PF13614 AAA domain AFE_RS06290 PF13807 G-rich domain on putative tyrosine kinase AFE_RS06290 PF02706 Chain length determinant protein AFE_RS06300 PF16363 GDP-mannose 4,6 dehydratase AFE_RS06305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFE_RS06305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFE_RS06305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFE_RS06310 PF14667 Polysaccharide biosynthesis C-terminal domain AFE_RS06310 PF01943 Polysaccharide biosynthesis protein AFE_RS06330 PF00534 Glycosyl transferases group 1 AFE_RS06330 PF13439 Glycosyltransferase Family 4 AFE_RS06340 PF13439 Glycosyltransferase Family 4 AFE_RS06340 PF00534 Glycosyl transferases group 1 AFE_RS06345 PF00733 Asparagine synthase AFE_RS06345 PF13537 Glutamine amidotransferase domain AFE_RS06350 PF13439 Glycosyltransferase Family 4 AFE_RS06350 PF00534 Glycosyl transferases group 1 AFE_RS06355 PF13439 Glycosyltransferase Family 4 AFE_RS06355 PF00534 Glycosyl transferases group 1 AFE_RS06360 PF01050 Mannose-6-phosphate isomerase AFE_RS06360 PF00483 Nucleotidyl transferase AFE_RS06365 PF13439 Glycosyltransferase Family 4 AFE_RS06365 PF00534 Glycosyl transferases group 1 AFE_RS06390 PF01850 PIN domain AFE_RS06410 PF00483 Nucleotidyl transferase AFE_RS06410 PF01050 Mannose-6-phosphate isomerase AFE_RS06435 PF02397 Bacterial sugar transferase AFE_RS06440 PF00176 SNF2 family N-terminal domain AFE_RS06440 PF12419 SNF2 Helicase protein AFE_RS06440 PF00271 Helicase conserved C-terminal domain AFE_RS06450 PF01695 IstB-like ATP binding protein AFE_RS06455 PF00665 Integrase core domain AFE_RS06460 PF17342 Family of unknown function (DUF5372) AFE_RS06470 PF07508 Recombinase AFE_RS06470 PF00239 Resolvase, N terminal domain AFE_RS06470 PF13408 Recombinase zinc beta ribbon domain AFE_RS06510 PF00664 ABC transporter transmembrane region AFE_RS06510 PF00005 ABC transporter AFE_RS06515 PF00005 ABC transporter AFE_RS06515 PF00664 ABC transporter transmembrane region AFE_RS06525 PF01571 Aminomethyltransferase folate-binding domain AFE_RS06535 PF02910 Fumarate reductase flavoprotein C-term AFE_RS06535 PF00890 FAD binding domain AFE_RS06540 PF08281 Sigma-70, region 4 AFE_RS06540 PF04542 Sigma-70 region 2 AFE_RS06550 PF13180 PDZ domain AFE_RS06555 PF06421 GTP-binding protein LepA C-terminus AFE_RS06555 PF03144 Elongation factor Tu domain 2 AFE_RS06555 PF00009 Elongation factor Tu GTP binding domain AFE_RS06555 PF00679 Elongation factor G C-terminus AFE_RS06560 PF10502 Signal peptidase, peptidase S26 AFE_RS06570 PF00035 Double-stranded RNA binding motif AFE_RS06570 PF14622 Ribonuclease-III-like AFE_RS06575 PF07650 KH domain AFE_RS06575 PF01926 50S ribosome-binding GTPase AFE_RS06580 PF11967 Recombination protein O N terminal AFE_RS06580 PF02565 Recombination protein O C terminal AFE_RS06585 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AFE_RS06590 PF01648 4'-phosphopantetheinyl transferase superfamily AFE_RS06595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFE_RS06595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFE_RS06595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFE_RS06600 PF00294 pfkB family carbohydrate kinase AFE_RS06600 PF01467 Cytidylyltransferase-like AFE_RS06605 PF01171 PP-loop family AFE_RS06610 PF01430 Hsp33 protein AFE_RS06615 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system AFE_RS06660 PF00534 Glycosyl transferases group 1 AFE_RS06660 PF13439 Glycosyltransferase Family 4 AFE_RS06665 PF13439 Glycosyltransferase Family 4 AFE_RS06665 PF00534 Glycosyl transferases group 1 AFE_RS06675 PF00034 Cytochrome c AFE_RS06680 PF01545 Cation efflux family AFE_RS06690 PF00270 DEAD/DEAH box helicase AFE_RS06690 PF00271 Helicase conserved C-terminal domain AFE_RS06695 PF00072 Response regulator receiver domain AFE_RS06695 PF00486 Transcriptional regulatory protein, C terminal AFE_RS06700 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS06700 PF11808 Phosphate regulon sensor protein PhoR AFE_RS06700 PF00989 PAS fold AFE_RS06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS06705 PF12849 PBP superfamily domain AFE_RS06710 PF00528 Binding-protein-dependent transport system inner membrane component AFE_RS06715 PF00528 Binding-protein-dependent transport system inner membrane component AFE_RS06720 PF00005 ABC transporter AFE_RS06725 PF01895 PhoU domain AFE_RS06730 PF02541 Ppx/GppA phosphatase family AFE_RS06740 PF00318 Ribosomal protein S2 AFE_RS06745 PF00889 Elongation factor TS AFE_RS06750 PF00696 Amino acid kinase family AFE_RS06755 PF01765 Ribosome recycling factor AFE_RS06760 PF01255 Putative undecaprenyl diphosphate synthase AFE_RS06770 PF13288 DXP reductoisomerase C-terminal domain AFE_RS06770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AFE_RS06770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AFE_RS06775 PF02163 Peptidase family M50 AFE_RS06775 PF17820 PDZ domain AFE_RS06780 PF01103 Surface antigen AFE_RS06780 PF07244 Surface antigen variable number repeat AFE_RS06790 PF00132 Bacterial transferase hexapeptide (six repeats) AFE_RS06790 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AFE_RS06795 PF07977 FabA-like domain AFE_RS06800 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AFE_RS06800 PF00132 Bacterial transferase hexapeptide (six repeats) AFE_RS06805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFE_RS06805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFE_RS06810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFE_RS06815 PF02684 Lipid-A-disaccharide synthetase AFE_RS06820 PF01351 Ribonuclease HII AFE_RS06825 PF14579 Helix-hairpin-helix motif AFE_RS06825 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFE_RS06825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFE_RS06825 PF01336 OB-fold nucleic acid binding domain AFE_RS06825 PF02811 PHP domain AFE_RS06830 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AFE_RS06835 PF11734 TilS substrate C-terminal domain AFE_RS06835 PF01171 PP-loop family AFE_RS06835 PF09179 TilS substrate binding domain AFE_RS06840 PF01979 Amidohydrolase family AFE_RS06845 PF01258 Prokaryotic dksA/traR C4-type zinc finger AFE_RS06850 PF13419 Haloacid dehalogenase-like hydrolase AFE_RS06860 PF00578 AhpC/TSA family AFE_RS06865 PF13638 PIN domain AFE_RS06865 PF02562 PhoH-like protein AFE_RS06870 PF17944 Arginine decarboxylase C-terminal helical extension AFE_RS06870 PF17810 Arginine decarboxylase helical bundle domain AFE_RS06870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFE_RS06880 PF01557 Fumarylacetoacetate (FAA) hydrolase family AFE_RS06910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS06915 PF01012 Electron transfer flavoprotein domain AFE_RS06915 PF00766 Electron transfer flavoprotein FAD-binding domain AFE_RS06920 PF01012 Electron transfer flavoprotein domain AFE_RS06925 PF01152 Bacterial-like globin AFE_RS06940 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS06945 PF02472 Biopolymer transport protein ExbD/TolR AFE_RS06955 PF01497 Periplasmic binding protein AFE_RS06960 PF01032 FecCD transport family AFE_RS06965 PF00005 ABC transporter AFE_RS06985 PF01032 FecCD transport family AFE_RS07020 PF00581 Rhodanese-like domain AFE_RS07030 PF03206 Nitrogen fixation protein NifW AFE_RS07035 PF00132 Bacterial transferase hexapeptide (six repeats) AFE_RS07040 PF00682 HMGL-like AFE_RS07045 PF00266 Aminotransferase class-V AFE_RS07050 PF04324 BFD-like [2Fe-2S] binding domain AFE_RS07050 PF01106 NifU-like domain AFE_RS07050 PF01592 NifU-like N terminal domain AFE_RS07055 PF01521 Iron-sulphur cluster biosynthesis AFE_RS07065 PF04891 NifQ AFE_RS07070 PF12838 4Fe-4S dicluster domain AFE_RS07075 PF05082 Rop-like AFE_RS07080 PF03270 Protein of unknown function, DUF269 AFE_RS07085 PF02579 Dinitrogenase iron-molybdenum cofactor AFE_RS07090 PF00148 Nitrogenase component 1 type Oxidoreductase AFE_RS07095 PF00148 Nitrogenase component 1 type Oxidoreductase AFE_RS07095 PF04324 BFD-like [2Fe-2S] binding domain AFE_RS07105 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS07110 PF11844 Domain of unknown function (DUF3364) AFE_RS07110 PF00148 Nitrogenase component 1 type Oxidoreductase AFE_RS07115 PF00148 Nitrogenase component 1 type Oxidoreductase AFE_RS07120 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AFE_RS07130 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) AFE_RS07135 PF03747 ADP-ribosylglycohydrolase AFE_RS07140 PF00158 Sigma-54 interaction domain AFE_RS07140 PF02954 Bacterial regulatory protein, Fis family AFE_RS07140 PF01590 GAF domain AFE_RS07145 PF04055 Radical SAM superfamily AFE_RS07145 PF02579 Dinitrogenase iron-molybdenum cofactor AFE_RS07150 PF00037 4Fe-4S binding domain AFE_RS07155 PF01521 Iron-sulphur cluster biosynthesis AFE_RS07170 PF05484 LRV protein FeS4 cluster AFE_RS07170 PF01816 Leucine rich repeat variant AFE_RS07175 PF04319 NifZ domain AFE_RS07185 PF00266 Aminotransferase class-V AFE_RS07190 PF06988 NifT/FixU protein AFE_RS07200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFE_RS07205 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS07220 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AFE_RS07220 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AFE_RS07225 PF03459 TOBE domain AFE_RS07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS07230 PF00171 Aldehyde dehydrogenase family AFE_RS07250 PF00294 pfkB family carbohydrate kinase AFE_RS07255 PF00862 Sucrose synthase AFE_RS07255 PF00534 Glycosyl transferases group 1 AFE_RS07260 PF00862 Sucrose synthase AFE_RS07260 PF00534 Glycosyl transferases group 1 AFE_RS07265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFE_RS07265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFE_RS07280 PF00589 Phage integrase family AFE_RS07280 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS07325 PF01695 IstB-like ATP binding protein AFE_RS07340 PF00436 Single-strand binding protein family AFE_RS07345 PF13086 AAA domain AFE_RS07345 PF13086 AAA domain AFE_RS07345 PF13087 AAA domain AFE_RS07345 PF13195 Protein of unknown function (DUF4011) AFE_RS07345 PF13195 Protein of unknown function (DUF4011) AFE_RS07345 PF13087 AAA domain AFE_RS07360 PF04851 Type III restriction enzyme, res subunit AFE_RS07360 PF08463 EcoEI R protein C-terminal AFE_RS07360 PF00271 Helicase conserved C-terminal domain AFE_RS07360 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AFE_RS07370 PF02384 N-6 DNA Methylase AFE_RS07370 PF12161 HsdM N-terminal domain AFE_RS07375 PF01850 PIN domain AFE_RS07385 PF00216 Bacterial DNA-binding protein AFE_RS07390 PF00216 Bacterial DNA-binding protein AFE_RS07405 PF04221 RelB antitoxin AFE_RS07415 PF00501 AMP-binding enzyme AFE_RS07415 PF01553 Acyltransferase AFE_RS07415 PF13193 AMP-binding enzyme C-terminal domain AFE_RS07425 PF02796 Helix-turn-helix domain of resolvase AFE_RS07425 PF00665 Integrase core domain AFE_RS07460 PF00005 ABC transporter AFE_RS07465 PF00005 ABC transporter AFE_RS07470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS07480 PF01527 Transposase AFE_RS07495 PF12728 Helix-turn-helix domain AFE_RS07560 PF01381 Helix-turn-helix AFE_RS07575 PF00437 Type II/IV secretion system protein AFE_RS07600 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AFE_RS07640 PF13180 PDZ domain AFE_RS07650 PF00011 Hsp20/alpha crystallin family AFE_RS07660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFE_RS07660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFE_RS07665 PF00384 Molybdopterin oxidoreductase AFE_RS07675 PF02634 FdhD/NarQ family AFE_RS07685 PF00970 Oxidoreductase FAD-binding domain AFE_RS07685 PF00111 2Fe-2S iron-sulfur cluster binding domain AFE_RS07685 PF00175 Oxidoreductase NAD-binding domain AFE_RS07690 PF03063 Prismane/CO dehydrogenase family AFE_RS07695 PF13545 Crp-like helix-turn-helix domain AFE_RS07695 PF00027 Cyclic nucleotide-binding domain AFE_RS07705 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AFE_RS07710 PF00361 Proton-conducting membrane transporter AFE_RS07710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFE_RS07715 PF13183 4Fe-4S dicluster domain AFE_RS07715 PF02754 Cysteine-rich domain AFE_RS07720 PF01565 FAD binding domain AFE_RS07725 PF02913 FAD linked oxidases, C-terminal domain AFE_RS07725 PF01565 FAD binding domain AFE_RS07740 PF01614 Bacterial transcriptional regulator AFE_RS07740 PF09339 IclR helix-turn-helix domain AFE_RS07760 PF01979 Amidohydrolase family AFE_RS07765 PF00920 Dehydratase family AFE_RS07770 PF03481 Putative GTP-binding controlling metal-binding AFE_RS07770 PF01300 Telomere recombination AFE_RS07785 PF01116 Fructose-bisphosphate aldolase class-II AFE_RS07795 PF08406 CbbQ/NirQ/NorQ C-terminal AFE_RS07795 PF07728 AAA domain (dynein-related subfamily) AFE_RS07800 PF13614 AAA domain AFE_RS07810 PF00210 Ferritin-like domain AFE_RS07815 PF00936 BMC domain AFE_RS07820 PF00936 BMC domain AFE_RS07825 PF00936 BMC domain AFE_RS07835 PF03319 Ethanolamine utilisation protein EutN/carboxysome AFE_RS07850 PF00101 Ribulose bisphosphate carboxylase, small chain AFE_RS07855 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFE_RS07855 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFE_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS07860 PF03466 LysR substrate binding domain AFE_RS07870 PF04335 VirB8 protein AFE_RS07895 PF01464 Transglycosylase SLT domain AFE_RS07900 PF02534 Type IV secretory system Conjugative DNA transfer AFE_RS07965 PF00563 EAL domain AFE_RS07965 PF03707 Bacterial signalling protein N terminal repeat AFE_RS07965 PF00990 Diguanylate cyclase, GGDEF domain AFE_RS07995 PF17762 HTH domain found in ParB protein AFE_RS07995 PF02195 ParB-like nuclease domain AFE_RS08000 PF13614 AAA domain AFE_RS08015 PF00248 Aldo/keto reductase family AFE_RS08020 PF03707 Bacterial signalling protein N terminal repeat AFE_RS08020 PF00990 Diguanylate cyclase, GGDEF domain AFE_RS08020 PF00563 EAL domain AFE_RS08060 PF01381 Helix-turn-helix AFE_RS08065 PF01131 DNA topoisomerase AFE_RS08065 PF01751 Toprim domain AFE_RS08075 PF13091 PLD-like domain AFE_RS08075 PF13396 Phospholipase_D-nuclease N-terminal AFE_RS08080 PF01590 GAF domain AFE_RS08080 PF00158 Sigma-54 interaction domain AFE_RS08080 PF02954 Bacterial regulatory protein, Fis family AFE_RS08085 PF00171 Aldehyde dehydrogenase family AFE_RS08115 PF00717 Peptidase S24-like AFE_RS08120 PF11799 impB/mucB/samB family C-terminal domain AFE_RS08120 PF00817 impB/mucB/samB family AFE_RS08120 PF13438 Domain of unknown function (DUF4113) AFE_RS08120 PF11798 IMS family HHH motif AFE_RS08130 PF02705 K+ potassium transporter AFE_RS08135 PF01381 Helix-turn-helix AFE_RS08160 PF00488 MutS domain V AFE_RS08160 PF05192 MutS domain III AFE_RS08160 PF05190 MutS family domain IV AFE_RS08160 PF01624 MutS domain I AFE_RS08160 PF05188 MutS domain II AFE_RS08170 PF04461 Protein of unknown function (DUF520) AFE_RS08175 PF00534 Glycosyl transferases group 1 AFE_RS08175 PF13439 Glycosyltransferase Family 4 AFE_RS08180 PF01027 Inhibitor of apoptosis-promoting Bax1 AFE_RS08200 PF02913 FAD linked oxidases, C-terminal domain AFE_RS08200 PF01565 FAD binding domain AFE_RS08205 PF02569 Pantoate-beta-alanine ligase AFE_RS08210 PF02548 Ketopantoate hydroxymethyltransferase AFE_RS08215 PF01712 Deoxynucleoside kinase AFE_RS08225 PF02272 DHHA1 domain AFE_RS08225 PF01743 Poly A polymerase head domain AFE_RS08225 PF12627 Probable RNA and SrmB- binding site of polymerase A AFE_RS08225 PF01368 DHH family AFE_RS08225 PF00571 CBS domain AFE_RS08230 PF01743 Poly A polymerase head domain AFE_RS08230 PF12627 Probable RNA and SrmB- binding site of polymerase A AFE_RS08230 PF12626 Polymerase A arginine-rich C-terminus AFE_RS08235 PF00535 Glycosyl transferase family 2 AFE_RS08240 PF00571 CBS domain AFE_RS08240 PF00478 IMP dehydrogenase / GMP reductase domain AFE_RS08245 PF00958 GMP synthase C terminal domain AFE_RS08245 PF02540 NAD synthase AFE_RS08245 PF00117 Glutamine amidotransferase class-I AFE_RS08255 PF01850 PIN domain AFE_RS08265 PF13520 Amino acid permease AFE_RS08270 PF00696 Amino acid kinase family AFE_RS08270 PF01472 PUA domain AFE_RS08275 PF12794 Mechanosensitive ion channel inner membrane domain 1 AFE_RS08275 PF12795 Mechanosensitive ion channel porin domain AFE_RS08275 PF00924 Mechanosensitive ion channel AFE_RS08290 PF01300 Telomere recombination AFE_RS08295 PF02163 Peptidase family M50 AFE_RS08300 PF00579 tRNA synthetases class I (W and Y) AFE_RS08305 PF02616 Segregation and condensation protein ScpA AFE_RS08310 PF04079 Segregation and condensation complex subunit ScpB AFE_RS08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS08320 PF00849 RNA pseudouridylate synthase AFE_RS08320 PF01479 S4 domain AFE_RS08340 PF07690 Major Facilitator Superfamily AFE_RS08350 PF11897 Protein of unknown function (DUF3417) AFE_RS08350 PF00343 Carbohydrate phosphorylase AFE_RS08355 PF00113 Enolase, C-terminal TIM barrel domain AFE_RS08355 PF03952 Enolase, N-terminal domain AFE_RS08360 PF00224 Pyruvate kinase, barrel domain AFE_RS08360 PF02887 Pyruvate kinase, alpha/beta domain AFE_RS08360 PF00391 PEP-utilising enzyme, mobile domain AFE_RS08370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFE_RS08370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS08380 PF00294 pfkB family carbohydrate kinase AFE_RS08385 PF01515 Phosphate acetyl/butaryl transferase AFE_RS08390 PF00083 Sugar (and other) transporter AFE_RS08395 PF00871 Acetokinase family AFE_RS08400 PF02817 e3 binding domain AFE_RS08400 PF00364 Biotin-requiring enzyme AFE_RS08400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFE_RS08405 PF02780 Transketolase, C-terminal domain AFE_RS08405 PF02779 Transketolase, pyrimidine binding domain AFE_RS08410 PF00676 Dehydrogenase E1 component AFE_RS08420 PF01676 Metalloenzyme superfamily AFE_RS08420 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AFE_RS08425 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AFE_RS08425 PF02896 PEP-utilising enzyme, TIM barrel domain AFE_RS08425 PF00391 PEP-utilising enzyme, mobile domain AFE_RS08435 PF05036 Sporulation related domain AFE_RS08435 PF03330 Lytic transglycolase AFE_RS08440 PF01546 Peptidase family M20/M25/M40 AFE_RS08440 PF07687 Peptidase dimerisation domain AFE_RS08445 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AFE_RS08445 PF14602 Hexapeptide repeat of succinyl-transferase AFE_RS08445 PF00132 Bacterial transferase hexapeptide (six repeats) AFE_RS08450 PF00155 Aminotransferase class I and II AFE_RS08460 PF13419 Haloacid dehalogenase-like hydrolase AFE_RS08470 PF01979 Amidohydrolase family AFE_RS08480 PF00877 NlpC/P60 family AFE_RS08480 PF01476 LysM domain AFE_RS08505 PF04542 Sigma-70 region 2 AFE_RS08505 PF04545 Sigma-70, region 4 AFE_RS08505 PF04539 Sigma-70 region 3 AFE_RS08505 PF00140 Sigma-70 factor, region 1.2 AFE_RS08535 PF00456 Transketolase, thiamine diphosphate binding domain AFE_RS08535 PF02780 Transketolase, C-terminal domain AFE_RS08535 PF02779 Transketolase, pyrimidine binding domain AFE_RS08540 PF11953 Domain of unknown function (DUF3470) AFE_RS08540 PF00037 4Fe-4S binding domain AFE_RS08550 PF03595 Voltage-dependent anion channel AFE_RS08560 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AFE_RS08560 PF00730 HhH-GPD superfamily base excision DNA repair protein AFE_RS08565 PF00535 Glycosyl transferase family 2 AFE_RS08590 PF05199 GMC oxidoreductase AFE_RS08590 PF00732 GMC oxidoreductase AFE_RS08605 PF01329 Pterin 4 alpha carbinolamine dehydratase AFE_RS08635 PF01726 LexA DNA binding domain AFE_RS08635 PF00717 Peptidase S24-like AFE_RS08650 PF02811 PHP domain AFE_RS08650 PF14579 Helix-hairpin-helix motif AFE_RS08650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFE_RS08650 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFE_RS08650 PF01336 OB-fold nucleic acid binding domain AFE_RS08660 PF01433 Peptidase family M1 domain AFE_RS08660 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AFE_RS08660 PF11940 Domain of unknown function (DUF3458) Ig-like fold AFE_RS08675 PF02503 Polyphosphate kinase middle domain AFE_RS08675 PF13090 Polyphosphate kinase C-terminal domain 2 AFE_RS08675 PF17941 Polyphosphate kinase C-terminal domain 1 AFE_RS08675 PF13089 Polyphosphate kinase N-terminal domain AFE_RS08680 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AFE_RS08680 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AFE_RS08685 PF00873 AcrB/AcrD/AcrF family AFE_RS08690 PF13533 Biotin-lipoyl like AFE_RS08695 PF02321 Outer membrane efflux protein AFE_RS08705 PF02545 Maf-like protein AFE_RS08710 PF00311 Phosphoenolpyruvate carboxylase AFE_RS08715 PF17209 Hfq protein AFE_RS08720 PF01926 50S ribosome-binding GTPase AFE_RS08720 PF13167 GTP-binding GTPase N-terminal AFE_RS08720 PF16360 GTP-binding GTPase Middle Region AFE_RS08725 PF01145 SPFH domain / Band 7 family AFE_RS08730 PF01145 SPFH domain / Band 7 family AFE_RS08735 PF13393 Histidyl-tRNA synthetase AFE_RS08740 PF00709 Adenylosuccinate synthetase AFE_RS08750 PF17876 Cold shock domain AFE_RS08750 PF00773 RNB domain AFE_RS08750 PF08461 Ribonuclease R winged-helix domain AFE_RS08750 PF08206 Ribonuclease B OB domain AFE_RS08755 PF03976 Polyphosphate kinase 2 (PPK2) AFE_RS08760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS08760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFE_RS08765 PF00994 Probable molybdopterin binding domain AFE_RS08765 PF02464 Competence-damaged protein AFE_RS08770 PF02371 Transposase IS116/IS110/IS902 family AFE_RS08770 PF01548 Transposase AFE_RS08775 PF00551 Formyl transferase AFE_RS08780 PF02769 AIR synthase related protein, C-terminal domain AFE_RS08780 PF00586 AIR synthase related protein, N-terminal domain AFE_RS08785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AFE_RS08785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AFE_RS08790 PF01066 CDP-alcohol phosphatidyltransferase AFE_RS08795 PF11638 DnaA N-terminal domain AFE_RS08795 PF00308 Bacterial dnaA protein AFE_RS08795 PF08299 Bacterial dnaA protein helix-turn-helix AFE_RS08800 PF03631 Virulence factor BrkB AFE_RS08810 PF01783 Ribosomal L32p protein family AFE_RS08815 PF02504 Fatty acid synthesis protein AFE_RS08820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFE_RS08820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AFE_RS08825 PF00698 Acyl transferase domain AFE_RS08835 PF00550 Phosphopantetheine attachment site AFE_RS08840 PF00109 Beta-ketoacyl synthase, N-terminal domain AFE_RS08840 PF02801 Beta-ketoacyl synthase, C-terminal domain AFE_RS08855 PF02223 Thymidylate kinase AFE_RS08860 PF09115 DNA polymerase III, delta subunit, C terminal AFE_RS08875 PF12169 DNA polymerase III subunits gamma and tau domain III AFE_RS08875 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AFE_RS08875 PF12170 DNA polymerase III tau subunit V interacting with alpha AFE_RS08880 PF02575 YbaB/EbfC DNA-binding family AFE_RS08885 PF13662 Toprim domain AFE_RS08885 PF02132 RecR protein AFE_RS08890 PF00909 Ammonium Transporter Family AFE_RS08895 PF01256 Carbohydrate kinase AFE_RS08895 PF03853 YjeF-related protein N-terminus AFE_RS08900 PF00202 Aminotransferase class-III AFE_RS08910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AFE_RS08915 PF08676 MutL C terminal dimerisation domain AFE_RS08915 PF01119 DNA mismatch repair protein, C-terminal domain AFE_RS08925 PF00334 Nucleoside diphosphate kinase AFE_RS08930 PF04055 Radical SAM superfamily AFE_RS08940 PF13464 Domain of unknown function (DUF4115) AFE_RS08945 PF04551 GcpE protein AFE_RS08950 PF03129 Anticodon binding domain AFE_RS08950 PF13393 Histidyl-tRNA synthetase AFE_RS08965 PF01926 50S ribosome-binding GTPase AFE_RS08965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AFE_RS08975 PF12849 PBP superfamily domain AFE_RS08980 PF00528 Binding-protein-dependent transport system inner membrane component AFE_RS08985 PF00528 Binding-protein-dependent transport system inner membrane component AFE_RS09000 PF01925 Sulfite exporter TauE/SafE AFE_RS09010 PF00873 AcrB/AcrD/AcrF family AFE_RS09015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS09030 PF01161 Phosphatidylethanolamine-binding protein AFE_RS09040 PF00037 4Fe-4S binding domain AFE_RS09040 PF11953 Domain of unknown function (DUF3470) AFE_RS09055 PF01266 FAD dependent oxidoreductase AFE_RS09065 PF01103 Surface antigen AFE_RS09065 PF07244 Surface antigen variable number repeat AFE_RS09065 PF17243 POTRA domain TamA domain 1 AFE_RS09085 PF00034 Cytochrome c AFE_RS09105 PF01370 NAD dependent epimerase/dehydratase family AFE_RS09110 PF01370 NAD dependent epimerase/dehydratase family AFE_RS09115 PF02080 TrkA-C domain AFE_RS09115 PF00999 Sodium/hydrogen exchanger family AFE_RS09115 PF02254 TrkA-N domain AFE_RS09120 PF16177 Acetyl-coenzyme A synthetase N-terminus AFE_RS09120 PF00501 AMP-binding enzyme AFE_RS09120 PF13193 AMP-binding enzyme C-terminal domain AFE_RS09125 PF17871 AAA lid domain AFE_RS09125 PF07724 AAA domain (Cdc48 subfamily) AFE_RS09125 PF10431 C-terminal, D2-small domain, of ClpB protein AFE_RS09125 PF00004 ATPase family associated with various cellular activities (AAA) AFE_RS09125 PF02861 Clp amino terminal domain, pathogenicity island component AFE_RS09135 PF01264 Chorismate synthase AFE_RS09140 PF02649 Type I GTP cyclohydrolase folE2 AFE_RS09145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AFE_RS09145 PF02780 Transketolase, C-terminal domain AFE_RS09145 PF02779 Transketolase, pyrimidine binding domain AFE_RS09150 PF00348 Polyprenyl synthetase AFE_RS09155 PF02609 Exonuclease VII small subunit AFE_RS09160 PF07690 Major Facilitator Superfamily AFE_RS09170 PF00085 Thioredoxin AFE_RS09175 PF02601 Exonuclease VII, large subunit AFE_RS09175 PF13742 OB-fold nucleic acid binding domain AFE_RS09180 PF13360 PQQ-like domain AFE_RS09180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AFE_RS09180 PF01011 PQQ enzyme repeat AFE_RS09190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AFE_RS09195 PF00149 Calcineurin-like phosphoesterase AFE_RS09200 PF00690 Cation transporter/ATPase, N-terminus AFE_RS09200 PF00689 Cation transporting ATPase, C-terminus AFE_RS09205 PF08502 LeuA allosteric (dimerisation) domain AFE_RS09205 PF00682 HMGL-like AFE_RS09210 PF01037 Lrp/AsnC ligand binding domain AFE_RS09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS09225 PF03466 LysR substrate binding domain AFE_RS09230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AFE_RS09235 PF03472 Autoinducer binding domain AFE_RS09235 PF00196 Bacterial regulatory proteins, luxR family AFE_RS09245 PF00765 Autoinducer synthase AFE_RS09250 PF01878 EVE domain AFE_RS09260 PF00005 ABC transporter AFE_RS09270 PF01965 DJ-1/PfpI family AFE_RS09295 PF17074 Darcynin, domain of unknown function AFE_RS09300 PF01047 MarR family AFE_RS09305 PF02627 Carboxymuconolactone decarboxylase family AFE_RS09310 PF00583 Acetyltransferase (GNAT) family AFE_RS09340 PF00403 Heavy-metal-associated domain AFE_RS09345 PF00155 Aminotransferase class I and II AFE_RS09350 PF02222 ATP-grasp domain AFE_RS09350 PF01370 NAD dependent epimerase/dehydratase family AFE_RS09355 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AFE_RS09355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFE_RS09360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AFE_RS09360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AFE_RS09365 PF01022 Bacterial regulatory protein, arsR family AFE_RS09370 PF01207 Dihydrouridine synthase (Dus) AFE_RS09375 PF00521 DNA gyrase/topoisomerase IV, subunit A AFE_RS09380 PF00986 DNA gyrase B subunit, carboxyl terminus AFE_RS09380 PF01751 Toprim domain AFE_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS09380 PF00204 DNA gyrase B AFE_RS09385 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS09385 PF08521 Two-component sensor kinase N-terminal AFE_RS09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS09390 PF00072 Response regulator receiver domain AFE_RS09390 PF00486 Transcriptional regulatory protein, C terminal AFE_RS09405 PF00873 AcrB/AcrD/AcrF family AFE_RS09430 PF00873 AcrB/AcrD/AcrF family AFE_RS09470 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AFE_RS09470 PF09363 XFP C-terminal domain AFE_RS09470 PF09364 XFP N-terminal domain AFE_RS09485 PF07549 SecD/SecF GG Motif AFE_RS09485 PF02355 Protein export membrane protein AFE_RS09490 PF07549 SecD/SecF GG Motif AFE_RS09490 PF13721 SecD export protein N-terminal TM region AFE_RS09490 PF02355 Protein export membrane protein AFE_RS09495 PF02699 Preprotein translocase subunit AFE_RS09500 PF01702 Queuine tRNA-ribosyltransferase AFE_RS09505 PF02547 Queuosine biosynthesis protein AFE_RS09510 PF00571 CBS domain AFE_RS09510 PF03471 Transporter associated domain AFE_RS09510 PF01595 Cyclin M transmembrane N-terminal domain AFE_RS09520 PF01053 Cys/Met metabolism PLP-dependent enzyme AFE_RS09525 PF00156 Phosphoribosyl transferase domain AFE_RS09525 PF13537 Glutamine amidotransferase domain AFE_RS09535 PF08245 Mur ligase middle domain AFE_RS09535 PF02875 Mur ligase family, glutamate ligase domain AFE_RS09540 PF17848 Acetyl-coA carboxylase zinc finger domain AFE_RS09540 PF01039 Carboxyl transferase domain AFE_RS09545 PF00290 Tryptophan synthase alpha chain AFE_RS09550 PF00291 Pyridoxal-phosphate dependent enzyme AFE_RS09555 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AFE_RS09560 PF01416 tRNA pseudouridine synthase AFE_RS09570 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFE_RS09570 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFE_RS09575 PF00180 Isocitrate/isopropylmalate dehydrogenase AFE_RS09580 PF12804 MobA-like NTP transferase domain AFE_RS09585 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AFE_RS09590 PF00994 Probable molybdopterin binding domain AFE_RS09590 PF03453 MoeA N-terminal region (domain I and II) AFE_RS09590 PF03454 MoeA C-terminal region (domain IV) AFE_RS09595 PF13091 PLD-like domain AFE_RS09600 PF01343 Peptidase family S49 AFE_RS09605 PF00128 Alpha amylase, catalytic domain AFE_RS09610 PF11941 Domain of unknown function (DUF3459) AFE_RS09610 PF00128 Alpha amylase, catalytic domain AFE_RS09615 PF00534 Glycosyl transferases group 1 AFE_RS09625 PF01738 Dienelactone hydrolase family AFE_RS09625 PF00156 Phosphoribosyl transferase domain AFE_RS09630 PF00011 Hsp20/alpha crystallin family AFE_RS09635 PF08240 Alcohol dehydrogenase GroES-like domain AFE_RS09645 PF01435 Peptidase family M48 AFE_RS09650 PF07690 Major Facilitator Superfamily AFE_RS09690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS09695 PF00873 AcrB/AcrD/AcrF family AFE_RS09700 PF00005 ABC transporter AFE_RS09720 PF02637 GatB domain AFE_RS09720 PF02934 GatB/GatE catalytic domain AFE_RS09725 PF01425 Amidase AFE_RS09730 PF02686 Glu-tRNAGln amidotransferase C subunit AFE_RS09745 PF06463 Molybdenum Cofactor Synthesis C AFE_RS09745 PF04055 Radical SAM superfamily AFE_RS09765 PF04794 YdjC-like protein AFE_RS09780 PF01370 NAD dependent epimerase/dehydratase family AFE_RS09785 PF01048 Phosphorylase superfamily AFE_RS09790 PF13243 Squalene-hopene cyclase C-terminal domain AFE_RS09790 PF13249 Squalene-hopene cyclase N-terminal domain AFE_RS09800 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AFE_RS09800 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AFE_RS09805 PF02556 Preprotein translocase subunit SecB AFE_RS09815 PF01850 PIN domain AFE_RS09825 PF00171 Aldehyde dehydrogenase family AFE_RS09830 PF03129 Anticodon binding domain AFE_RS09830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFE_RS09830 PF04073 Aminoacyl-tRNA editing domain AFE_RS09835 PF00582 Universal stress protein family AFE_RS09865 PF13277 YmdB-like protein AFE_RS09870 PF01812 5-formyltetrahydrofolate cyclo-ligase family AFE_RS09885 PF03717 Penicillin-binding Protein dimerisation domain AFE_RS09885 PF00905 Penicillin binding protein transpeptidase domain AFE_RS09890 PF14693 Ribosomal protein TL5, C-terminal domain AFE_RS09890 PF01386 Ribosomal L25p family AFE_RS09895 PF01195 Peptidyl-tRNA hydrolase AFE_RS09900 PF01926 50S ribosome-binding GTPase AFE_RS09900 PF06071 Protein of unknown function (DUF933) AFE_RS09905 PF07883 Cupin domain AFE_RS09905 PF01381 Helix-turn-helix AFE_RS09910 PF00361 Proton-conducting membrane transporter AFE_RS09915 PF00146 NADH dehydrogenase AFE_RS09925 PF00361 Proton-conducting membrane transporter AFE_RS09930 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFE_RS09930 PF00374 Nickel-dependent hydrogenase AFE_RS09930 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFE_RS09935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFE_RS09940 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFE_RS09940 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFE_RS09945 PF07728 AAA domain (dynein-related subfamily) AFE_RS09945 PF08406 CbbQ/NirQ/NorQ C-terminal AFE_RS09950 PF00092 von Willebrand factor type A domain AFE_RS09955 PF03466 LysR substrate binding domain AFE_RS09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS09960 PF03831 PhnA domain AFE_RS09960 PF08274 PhnA Zinc-Ribbon AFE_RS09995 PF00664 ABC transporter transmembrane region AFE_RS09995 PF00005 ABC transporter AFE_RS09995 PF03412 Peptidase C39 family AFE_RS10005 PF14883 Hypothetical glycosyl hydrolase family 13 AFE_RS10005 PF01522 Polysaccharide deacetylase AFE_RS10015 PF00144 Beta-lactamase AFE_RS10020 PF00293 NUDIX domain AFE_RS10025 PF00293 NUDIX domain AFE_RS10030 PF00849 RNA pseudouridylate synthase AFE_RS10030 PF01479 S4 domain AFE_RS10035 PF04371 Porphyromonas-type peptidyl-arginine deiminase AFE_RS10040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFE_RS10040 PF01568 Molydopterin dinucleotide binding domain AFE_RS10040 PF00384 Molybdopterin oxidoreductase AFE_RS10045 PF13247 4Fe-4S dicluster domain AFE_RS10070 PF00582 Universal stress protein family AFE_RS10075 PF07690 Major Facilitator Superfamily AFE_RS10085 PF01790 Prolipoprotein diacylglyceryl transferase AFE_RS10090 PF00580 UvrD/REP helicase N-terminal domain AFE_RS10090 PF13361 UvrD-like helicase C-terminal domain AFE_RS10095 PF01649 Ribosomal protein S20 AFE_RS10100 PF00005 ABC transporter AFE_RS10100 PF08402 TOBE domain AFE_RS10105 PF00528 Binding-protein-dependent transport system inner membrane component AFE_RS10115 PF00149 Calcineurin-like phosphoesterase AFE_RS10120 PF00270 DEAD/DEAH box helicase AFE_RS10120 PF00271 Helicase conserved C-terminal domain AFE_RS10120 PF00570 HRDC domain AFE_RS10120 PF09382 RQC domain AFE_RS10120 PF16124 RecQ zinc-binding AFE_RS10125 PF01491 Frataxin-like domain AFE_RS10145 PF03739 Lipopolysaccharide export system permease LptF/LptG AFE_RS10150 PF00883 Cytosol aminopeptidase family, catalytic domain AFE_RS10150 PF02789 Cytosol aminopeptidase family, N-terminal domain AFE_RS10165 PF08264 Anticodon-binding domain of tRNA AFE_RS10165 PF00133 tRNA synthetases class I (I, L, M and V) AFE_RS10165 PF10458 Valyl tRNA synthetase tRNA binding arm AFE_RS10170 PF06965 Na+/H+ antiporter 1 AFE_RS10175 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AFE_RS10175 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AFE_RS10185 PF00440 Bacterial regulatory proteins, tetR family AFE_RS10185 PF16925 Tetracyclin repressor-like, C-terminal domain AFE_RS10190 PF01738 Dienelactone hydrolase family AFE_RS10195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFE_RS10210 PF05656 Protein of unknown function (DUF805) AFE_RS10230 PF13419 Haloacid dehalogenase-like hydrolase AFE_RS10235 PF00849 RNA pseudouridylate synthase AFE_RS10235 PF01479 S4 domain AFE_RS10240 PF00575 S1 RNA binding domain AFE_RS10240 PF10150 Ribonuclease E/G family AFE_RS10240 PF12111 Polyribonucleotide phosphorylase C terminal AFE_RS10245 PF09190 DALR domain AFE_RS10245 PF01406 tRNA synthetases class I (C) catalytic domain AFE_RS10250 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFE_RS10255 PF17092 Penicillin-binding protein OB-like domain AFE_RS10255 PF00912 Transglycosylase AFE_RS10255 PF00905 Penicillin binding protein transpeptidase domain AFE_RS10260 PF00723 Glycosyl hydrolases family 15 AFE_RS10260 PF09137 Glucodextranase, domain N AFE_RS10285 PF00072 Response regulator receiver domain AFE_RS10285 PF00486 Transcriptional regulatory protein, C terminal AFE_RS10290 PF13493 Domain of unknown function (DUF4118) AFE_RS10290 PF13492 GAF domain AFE_RS10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS10290 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS10290 PF02702 Osmosensitive K+ channel His kinase sensor domain AFE_RS10300 PF03814 Potassium-transporting ATPase A subunit AFE_RS10310 PF02669 K+-transporting ATPase, c chain AFE_RS10320 PF01472 PUA domain AFE_RS10320 PF00696 Amino acid kinase family AFE_RS10330 PF00543 Nitrogen regulatory protein P-II AFE_RS10345 PF00999 Sodium/hydrogen exchanger family AFE_RS10375 PF00912 Transglycosylase AFE_RS10375 PF00905 Penicillin binding protein transpeptidase domain AFE_RS10375 PF06832 Penicillin-Binding Protein C-terminus Family AFE_RS10395 PF01925 Sulfite exporter TauE/SafE AFE_RS10405 PF01808 AICARFT/IMPCHase bienzyme AFE_RS10405 PF02142 MGS-like domain AFE_RS10410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AFE_RS10410 PF02843 Phosphoribosylglycinamide synthetase, C domain AFE_RS10410 PF02844 Phosphoribosylglycinamide synthetase, N domain AFE_RS10415 PF01300 Telomere recombination AFE_RS10420 PF01218 Coproporphyrinogen III oxidase AFE_RS10425 PF01180 Dihydroorotate dehydrogenase AFE_RS10435 PF04185 Phosphoesterase family AFE_RS10445 PF02472 Biopolymer transport protein ExbD/TolR AFE_RS10450 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS10465 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS10485 PF00083 Sugar (and other) transporter AFE_RS10490 PF06754 Phosphonate metabolism protein PhnG AFE_RS10495 PF05845 Bacterial phosphonate metabolism protein (PhnH) AFE_RS10500 PF05861 Bacterial phosphonate metabolism protein (PhnI) AFE_RS10505 PF06007 Phosphonate metabolism protein PhnJ AFE_RS10510 PF00005 ABC transporter AFE_RS10515 PF00005 ABC transporter AFE_RS10520 PF07969 Amidohydrolase family AFE_RS10530 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AFE_RS10530 PF00591 Glycosyl transferase family, a/b domain AFE_RS10535 PF07702 UTRA domain AFE_RS10535 PF00392 Bacterial regulatory proteins, gntR family AFE_RS10555 PF00005 ABC transporter AFE_RS10565 PF05506 Domain of unknown function (DUF756) AFE_RS10565 PF04185 Phosphoesterase family AFE_RS10575 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS10590 PF07715 TonB-dependent Receptor Plug Domain AFE_RS10590 PF00593 TonB dependent receptor AFE_RS10630 PF00083 Sugar (and other) transporter AFE_RS10640 PF00300 Histidine phosphatase superfamily (branch 1) AFE_RS10655 PF00672 HAMP domain AFE_RS10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS10655 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS10660 PF00486 Transcriptional regulatory protein, C terminal AFE_RS10660 PF00072 Response regulator receiver domain AFE_RS10665 PF00929 Exonuclease AFE_RS10670 PF00296 Luciferase-like monooxygenase AFE_RS10685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFE_RS10685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFE_RS10685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFE_RS10685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFE_RS10700 PF00690 Cation transporter/ATPase, N-terminus AFE_RS10700 PF00689 Cation transporting ATPase, C-terminus AFE_RS10705 PF01292 Prokaryotic cytochrome b561 AFE_RS10715 PF07690 Major Facilitator Superfamily AFE_RS10725 PF03979 Sigma-70 factor, region 1.1 AFE_RS10725 PF00140 Sigma-70 factor, region 1.2 AFE_RS10725 PF04542 Sigma-70 region 2 AFE_RS10725 PF04539 Sigma-70 region 3 AFE_RS10725 PF04545 Sigma-70, region 4 AFE_RS10725 PF04546 Sigma-70, non-essential region AFE_RS10730 PF10410 DnaB-helicase binding domain of primase AFE_RS10730 PF08278 DNA primase DnaG DnaB-binding AFE_RS10730 PF08275 DNA primase catalytic core, N-terminal domain AFE_RS10730 PF01807 CHC2 zinc finger AFE_RS10735 PF01713 Smr domain AFE_RS10735 PF00488 MutS domain V AFE_RS10745 PF01165 Ribosomal protein S21 AFE_RS10750 PF00140 Sigma-70 factor, region 1.2 AFE_RS10750 PF04542 Sigma-70 region 2 AFE_RS10750 PF04539 Sigma-70 region 3 AFE_RS10750 PF04545 Sigma-70, region 4 AFE_RS10755 PF01725 Ham1 family AFE_RS10760 PF03725 3' exoribonuclease family, domain 2 AFE_RS10760 PF01138 3' exoribonuclease family, domain 1 AFE_RS10775 PF06969 HemN C-terminal domain AFE_RS10775 PF04055 Radical SAM superfamily AFE_RS10785 PF01479 S4 domain AFE_RS10785 PF00849 RNA pseudouridylate synthase AFE_RS10790 PF07690 Major Facilitator Superfamily AFE_RS10795 PF07943 Penicillin-binding protein 5, C-terminal domain AFE_RS10795 PF00768 D-alanyl-D-alanine carboxypeptidase AFE_RS10815 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AFE_RS10815 PF02769 AIR synthase related protein, C-terminal domain AFE_RS10815 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AFE_RS10820 PF01259 SAICAR synthetase AFE_RS10825 PF10397 Adenylosuccinate lyase C-terminus AFE_RS10825 PF00206 Lyase AFE_RS10835 PF00701 Dihydrodipicolinate synthetase family AFE_RS10845 PF03006 Haemolysin-III related AFE_RS10850 PF11741 AMIN domain AFE_RS10850 PF01520 N-acetylmuramoyl-L-alanine amidase AFE_RS10855 PF00085 Thioredoxin AFE_RS10860 PF00462 Glutaredoxin AFE_RS10865 PF00581 Rhodanese-like domain AFE_RS10875 PF00873 AcrB/AcrD/AcrF family AFE_RS10880 PF13533 Biotin-lipoyl like AFE_RS10890 PF01022 Bacterial regulatory protein, arsR family AFE_RS10900 PF02384 N-6 DNA Methylase AFE_RS10900 PF12161 HsdM N-terminal domain AFE_RS10940 PF12008 Type I restriction and modification enzyme - subunit R C terminal AFE_RS10940 PF18766 SWI2/SNF2 ATPase AFE_RS10940 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AFE_RS10945 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AFE_RS10960 PF00899 ThiF family AFE_RS10970 PF01494 FAD binding domain AFE_RS10975 PF01494 FAD binding domain AFE_RS10980 PF04380 Membrane fusogenic activity AFE_RS11000 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AFE_RS11005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AFE_RS11020 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS11020 PF00589 Phage integrase family AFE_RS11025 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS11025 PF00589 Phage integrase family AFE_RS11070 PF13673 Acetyltransferase (GNAT) domain AFE_RS11075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFE_RS11080 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AFE_RS11080 PF00391 PEP-utilising enzyme, mobile domain AFE_RS11085 PF01695 IstB-like ATP binding protein AFE_RS11115 PF01545 Cation efflux family AFE_RS11120 PF13411 MerR HTH family regulatory protein AFE_RS11125 PF08241 Methyltransferase domain AFE_RS11130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AFE_RS11130 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AFE_RS11165 PF00873 AcrB/AcrD/AcrF family AFE_RS11210 PF13006 Insertion element 4 transposase N-terminal AFE_RS11210 PF01609 Transposase DDE domain AFE_RS11235 PF00403 Heavy-metal-associated domain AFE_RS11245 PF00034 Cytochrome c AFE_RS11255 PF00999 Sodium/hydrogen exchanger family AFE_RS11265 PF13520 Amino acid permease AFE_RS11285 PF00543 Nitrogen regulatory protein P-II AFE_RS11295 PF00696 Amino acid kinase family AFE_RS11295 PF01472 PUA domain AFE_RS11300 PF08443 RimK-like ATP-grasp domain AFE_RS11300 PF18030 RimK PreATP-grasp domain AFE_RS11300 PF02080 TrkA-C domain AFE_RS11305 PF00583 Acetyltransferase (GNAT) family AFE_RS11320 PF03050 Transposase IS66 family AFE_RS11320 PF13817 IS66 C-terminal element AFE_RS11320 PF13007 Transposase C of IS166 homeodomain AFE_RS11320 PF13005 zinc-finger binding domain of transposase IS66 AFE_RS11340 PF02669 K+-transporting ATPase, c chain AFE_RS11350 PF03814 Potassium-transporting ATPase A subunit AFE_RS11360 PF03814 Potassium-transporting ATPase A subunit AFE_RS11365 PF03203 MerC mercury resistance protein AFE_RS11370 PF00403 Heavy-metal-associated domain AFE_RS11370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFE_RS11370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS11375 PF00723 Glycosyl hydrolases family 15 AFE_RS11375 PF09137 Glucodextranase, domain N AFE_RS11380 PF13411 MerR HTH family regulatory protein AFE_RS11470 PF00665 Integrase core domain AFE_RS11480 PF01078 Magnesium chelatase, subunit ChlI AFE_RS11480 PF13335 Magnesium chelatase, subunit ChlI C-terminal AFE_RS11490 PF13411 MerR HTH family regulatory protein AFE_RS11505 PF03144 Elongation factor Tu domain 2 AFE_RS11505 PF00009 Elongation factor Tu GTP binding domain AFE_RS11505 PF16658 Class II release factor RF3, C-terminal domain AFE_RS11515 PF00814 Glycoprotease family AFE_RS11520 PF04851 Type III restriction enzyme, res subunit AFE_RS11520 PF13307 Helicase C-terminal domain AFE_RS11530 PF00877 NlpC/P60 family AFE_RS11545 PF07664 Ferrous iron transport protein B C terminus AFE_RS11545 PF17910 FeoB cytosolic helical domain AFE_RS11545 PF02421 Ferrous iron transport protein B AFE_RS11545 PF07670 Nucleoside recognition AFE_RS11555 PF00795 Carbon-nitrogen hydrolase AFE_RS11560 PF07722 Peptidase C26 AFE_RS11565 PF09335 SNARE associated Golgi protein AFE_RS11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFE_RS11580 PF03466 LysR substrate binding domain AFE_RS11595 PF00850 Histone deacetylase domain AFE_RS11605 PF07728 AAA domain (dynein-related subfamily) AFE_RS11605 PF08406 CbbQ/NirQ/NorQ C-terminal AFE_RS11650 PF03099 Biotin/lipoate A/B protein ligase family AFE_RS11660 PF01597 Glycine cleavage H-protein AFE_RS11670 PF01597 Glycine cleavage H-protein AFE_RS11675 PF02754 Cysteine-rich domain AFE_RS11690 PF01593 Flavin containing amine oxidoreductase AFE_RS11705 PF13686 DsrE/DsrF/DrsH-like family AFE_RS11710 PF01206 Sulfurtransferase TusA AFE_RS11715 PF00581 Rhodanese-like domain AFE_RS11720 PF06463 Molybdenum Cofactor Synthesis C AFE_RS11720 PF04055 Radical SAM superfamily AFE_RS11730 PF01967 MoaC family AFE_RS11740 PF04085 rod shape-determining protein MreC AFE_RS11750 PF03717 Penicillin-binding Protein dimerisation domain AFE_RS11750 PF00905 Penicillin binding protein transpeptidase domain AFE_RS11755 PF01098 Cell cycle protein AFE_RS11760 PF00768 D-alanyl-D-alanine carboxypeptidase AFE_RS11760 PF07943 Penicillin-binding protein 5, C-terminal domain AFE_RS11770 PF03099 Biotin/lipoate A/B protein ligase family AFE_RS11775 PF04055 Radical SAM superfamily AFE_RS11775 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AFE_RS11820 PF02091 Glycyl-tRNA synthetase alpha subunit AFE_RS11825 PF02092 Glycyl-tRNA synthetase beta subunit AFE_RS11840 PF18030 RimK PreATP-grasp domain AFE_RS11840 PF08443 RimK-like ATP-grasp domain AFE_RS11860 PF02677 Epoxyqueuosine reductase QueH AFE_RS11870 PF01510 N-acetylmuramoyl-L-alanine amidase AFE_RS11890 PF00043 Glutathione S-transferase, C-terminal domain AFE_RS11890 PF02798 Glutathione S-transferase, N-terminal domain AFE_RS11895 PF01638 HxlR-like helix-turn-helix AFE_RS11900 PF08502 LeuA allosteric (dimerisation) domain AFE_RS11900 PF00682 HMGL-like AFE_RS11905 PF02954 Bacterial regulatory protein, Fis family AFE_RS11905 PF00158 Sigma-54 interaction domain AFE_RS11905 PF01590 GAF domain AFE_RS11935 PF13732 Domain of unknown function (DUF4162) AFE_RS11935 PF00005 ABC transporter AFE_RS11955 PF00216 Bacterial DNA-binding protein AFE_RS11960 PF01588 Putative tRNA binding domain AFE_RS11960 PF03484 tRNA synthetase B5 domain AFE_RS11960 PF03147 Ferredoxin-fold anticodon binding domain AFE_RS11960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AFE_RS11960 PF03483 B3/4 domain AFE_RS11965 PF01409 tRNA synthetases class II core domain (F) AFE_RS11965 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AFE_RS11970 PF00453 Ribosomal protein L20 AFE_RS11975 PF01632 Ribosomal protein L35 AFE_RS11980 PF00707 Translation initiation factor IF-3, C-terminal domain AFE_RS11980 PF05198 Translation initiation factor IF-3, N-terminal domain AFE_RS11985 PF03129 Anticodon binding domain AFE_RS11985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFE_RS11985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFE_RS11985 PF02824 TGS domain AFE_RS12000 PF00361 Proton-conducting membrane transporter AFE_RS12005 PF00361 Proton-conducting membrane transporter AFE_RS12005 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AFE_RS12010 PF00361 Proton-conducting membrane transporter AFE_RS12010 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFE_RS12015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AFE_RS12020 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AFE_RS12025 PF12838 4Fe-4S dicluster domain AFE_RS12030 PF00146 NADH dehydrogenase AFE_RS12035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AFE_RS12035 PF00384 Molybdopterin oxidoreductase AFE_RS12035 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AFE_RS12040 PF10531 SLBB domain AFE_RS12040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AFE_RS12040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AFE_RS12050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFE_RS12055 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFE_RS12060 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFE_RS12065 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AFE_RS12075 PF03840 Preprotein translocase SecG subunit AFE_RS12080 PF00121 Triosephosphate isomerase AFE_RS12085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFE_RS12085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFE_RS12085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFE_RS12085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFE_RS12090 PF00809 Pterin binding enzyme AFE_RS12095 PF00004 ATPase family associated with various cellular activities (AAA) AFE_RS12095 PF17862 AAA+ lid domain AFE_RS12095 PF01434 Peptidase family M41 AFE_RS12095 PF06480 FtsH Extracellular AFE_RS12100 PF01523 Putative modulator of DNA gyrase AFE_RS12105 PF02867 Ribonucleotide reductase, barrel domain AFE_RS12105 PF00317 Ribonucleotide reductase, all-alpha domain AFE_RS12105 PF03477 ATP cone domain AFE_RS12110 PF00268 Ribonucleotide reductase, small chain AFE_RS12125 PF07690 Major Facilitator Superfamily AFE_RS12165 PF13115 YtkA-like AFE_RS12165 PF05425 Copper resistance protein D AFE_RS12165 PF04234 CopC domain AFE_RS12175 PF00817 impB/mucB/samB family AFE_RS12175 PF11799 impB/mucB/samB family C-terminal domain AFE_RS12180 PF01850 PIN domain AFE_RS12205 PF00692 dUTPase AFE_RS12210 PF10609 NUBPL iron-transfer P-loop NTPase AFE_RS12220 PF05173 Dihydrodipicolinate reductase, C-terminus AFE_RS12220 PF01113 Dihydrodipicolinate reductase, N-terminus AFE_RS12225 PF00684 DnaJ central domain AFE_RS12225 PF01556 DnaJ C terminal domain AFE_RS12225 PF00226 DnaJ domain AFE_RS12230 PF00012 Hsp70 protein AFE_RS12235 PF01025 GrpE AFE_RS12240 PF01628 HrcA protein C terminal domain AFE_RS12245 PF00471 Ribosomal protein L33 AFE_RS12250 PF00830 Ribosomal L28 family AFE_RS12255 PF09334 tRNA synthetases class I (M) AFE_RS12255 PF01588 Putative tRNA binding domain AFE_RS12260 PF00793 DAHP synthetase I family AFE_RS12260 PF18152 DAHP synthase ferredoxin-like domain AFE_RS12265 PF00206 Lyase AFE_RS12265 PF10415 Fumarase C C-terminus AFE_RS12270 PF01432 Peptidase family M3 AFE_RS12270 PF08439 Oligopeptidase F AFE_RS12290 PF08323 Starch synthase catalytic domain AFE_RS12290 PF00534 Glycosyl transferases group 1 AFE_RS12295 PF00753 Metallo-beta-lactamase superfamily AFE_RS12295 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AFE_RS12295 PF10996 Beta-Casp domain AFE_RS12305 PF00633 Helix-hairpin-helix motif AFE_RS12305 PF10576 Iron-sulfur binding domain of endonuclease III AFE_RS12305 PF00730 HhH-GPD superfamily base excision DNA repair protein AFE_RS12315 PF05658 Head domain of trimeric autotransporter adhesin AFE_RS12315 PF05662 Coiled stalk of trimeric autotransporter adhesin AFE_RS12315 PF13018 Extended Signal Peptide of Type V secretion system AFE_RS12315 PF03895 YadA-like membrane anchor domain AFE_RS12320 PF00691 OmpA family AFE_RS12320 PF04972 BON domain AFE_RS12350 PF13533 Biotin-lipoyl like AFE_RS12355 PF00664 ABC transporter transmembrane region AFE_RS12355 PF03412 Peptidase C39 family AFE_RS12355 PF00005 ABC transporter AFE_RS12365 PF00072 Response regulator receiver domain AFE_RS12365 PF00158 Sigma-54 interaction domain AFE_RS12365 PF02954 Bacterial regulatory protein, Fis family AFE_RS12395 PF00437 Type II/IV secretion system protein AFE_RS12405 PF00263 Bacterial type II and III secretion system protein AFE_RS12405 PF04972 BON domain AFE_RS12405 PF13629 Pilus formation protein N terminal region AFE_RS12460 PF13181 Tetratricopeptide repeat AFE_RS12490 PF01136 Peptidase family U32 AFE_RS12495 PF01136 Peptidase family U32 AFE_RS12500 PF02036 SCP-2 sterol transfer family AFE_RS12515 PF00034 Cytochrome c AFE_RS12525 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AFE_RS12525 PF00355 Rieske [2Fe-2S] domain AFE_RS12530 PF00032 Cytochrome b(C-terminal)/b6/petD AFE_RS12530 PF00033 Cytochrome b/b6/petB AFE_RS12535 PF02167 Cytochrome C1 family AFE_RS12560 PF01728 FtsJ-like methyltransferase AFE_RS12565 PF01985 CRS1 / YhbY (CRM) domain AFE_RS12570 PF04379 ApaG domain AFE_RS12575 PF01209 ubiE/COQ5 methyltransferase family AFE_RS12580 PF03144 Elongation factor Tu domain 2 AFE_RS12580 PF00009 Elongation factor Tu GTP binding domain AFE_RS12580 PF00679 Elongation factor G C-terminus AFE_RS12595 PF01678 Diaminopimelate epimerase AFE_RS12605 PF00589 Phage integrase family AFE_RS12605 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS12610 PF00227 Proteasome subunit AFE_RS12615 PF00004 ATPase family associated with various cellular activities (AAA) AFE_RS12615 PF07724 AAA domain (Cdc48 subfamily) AFE_RS12625 PF04542 Sigma-70 region 2 AFE_RS12625 PF00140 Sigma-70 factor, region 1.2 AFE_RS12625 PF04545 Sigma-70, region 4 AFE_RS12630 PF18075 FtsX extracellular domain AFE_RS12635 PF00005 ABC transporter AFE_RS12640 PF02881 SRP54-type protein, helical bundle domain AFE_RS12640 PF00448 SRP54-type protein, GTPase domain AFE_RS12650 PF01467 Cytidylyltransferase-like AFE_RS12655 PF00037 4Fe-4S binding domain AFE_RS12660 PF00350 Dynamin family AFE_RS12665 PF06827 Zinc finger found in FPG and IleRS AFE_RS12665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFE_RS12665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFE_RS12670 PF05175 Methyltransferase small domain AFE_RS12670 PF17827 PrmC N-terminal domain AFE_RS12675 PF03462 PCRF domain AFE_RS12675 PF00472 RF-1 domain AFE_RS12680 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AFE_RS12680 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AFE_RS12680 PF01488 Shikimate / quinate 5-dehydrogenase AFE_RS12690 PF03550 Outer membrane lipoprotein LolB AFE_RS12695 PF08544 GHMP kinases C terminal AFE_RS12695 PF00288 GHMP kinases N terminal domain AFE_RS12705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AFE_RS12705 PF14572 Phosphoribosyl synthetase-associated domain AFE_RS12740 PF02798 Glutathione S-transferase, N-terminal domain AFE_RS12750 PF01925 Sulfite exporter TauE/SafE AFE_RS12755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFE_RS12755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFE_RS12755 PF00205 Thiamine pyrophosphate enzyme, central domain AFE_RS12775 PF00873 AcrB/AcrD/AcrF family AFE_RS12800 PF01906 Putative heavy-metal-binding AFE_RS12810 PF11867 Domain of unknown function (DUF3387) AFE_RS12810 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AFE_RS12810 PF18766 SWI2/SNF2 ATPase AFE_RS12820 PF01420 Type I restriction modification DNA specificity domain AFE_RS12835 PF02384 N-6 DNA Methylase AFE_RS12855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFE_RS12855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFE_RS12860 PF02805 Metal binding domain of Ada AFE_RS12860 PF06029 AlkA N-terminal domain AFE_RS12860 PF00730 HhH-GPD superfamily base excision DNA repair protein AFE_RS12860 PF12833 Helix-turn-helix domain AFE_RS12865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFE_RS12875 PF00893 Small Multidrug Resistance protein AFE_RS12880 PF03358 NADPH-dependent FMN reductase AFE_RS12920 PF00557 Metallopeptidase family M24 AFE_RS12920 PF05195 Aminopeptidase P, N-terminal domain AFE_RS12930 PF18073 Rubredoxin metal binding domain AFE_RS12935 PF01168 Alanine racemase, N-terminal domain AFE_RS12935 PF00842 Alanine racemase, C-terminal domain AFE_RS12940 PF03796 DnaB-like helicase C terminal domain AFE_RS12940 PF00772 DnaB-like helicase N terminal domain AFE_RS12945 PF03948 Ribosomal protein L9, C-terminal domain AFE_RS12945 PF01281 Ribosomal protein L9, N-terminal domain AFE_RS12955 PF01084 Ribosomal protein S18 AFE_RS12960 PF01250 Ribosomal protein S6 AFE_RS12965 PF00933 Glycosyl hydrolase family 3 N terminal domain AFE_RS12970 PF13520 Amino acid permease AFE_RS12980 PF05958 tRNA (Uracil-5-)-methyltransferase AFE_RS12980 PF01938 TRAM domain AFE_RS13000 PF00291 Pyridoxal-phosphate dependent enzyme AFE_RS13005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AFE_RS13010 PF01145 SPFH domain / Band 7 family AFE_RS13020 PF02806 Alpha amylase, C-terminal all-beta domain AFE_RS13020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFE_RS13020 PF00128 Alpha amylase, catalytic domain AFE_RS13030 PF00483 Nucleotidyl transferase AFE_RS13040 PF09094 Domain of unknown function (DUF1925) AFE_RS13040 PF03065 Glycosyl hydrolase family 57 AFE_RS13040 PF09095 Domain of unknown function (DUF1926) AFE_RS13045 PF00480 ROK family AFE_RS13050 PF01177 Asp/Glu/Hydantoin racemase AFE_RS13055 PF04286 Protein of unknown function (DUF445) AFE_RS13065 PF00436 Single-strand binding protein family AFE_RS13070 PF17760 UvrA interaction domain AFE_RS13070 PF17755 UvrA DNA-binding domain AFE_RS13080 PF00085 Thioredoxin AFE_RS13085 PF17820 PDZ domain AFE_RS13085 PF13180 PDZ domain AFE_RS13090 PF02899 Phage integrase, N-terminal SAM-like domain AFE_RS13090 PF00589 Phage integrase family AFE_RS13100 PF01245 Ribosomal protein L19 AFE_RS13105 PF01746 tRNA (Guanine-1)-methyltransferase AFE_RS13110 PF05239 PRC-barrel domain AFE_RS13110 PF01782 RimM N-terminal domain AFE_RS13115 PF00886 Ribosomal protein S16 AFE_RS13120 PF00448 SRP54-type protein, GTPase domain AFE_RS13120 PF02881 SRP54-type protein, helical bundle domain AFE_RS13120 PF02978 Signal peptide binding domain AFE_RS13125 PF03358 NADPH-dependent FMN reductase AFE_RS13130 PF02040 Arsenical pump membrane protein AFE_RS13140 PF01451 Low molecular weight phosphotyrosine protein phosphatase AFE_RS13145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFE_RS13150 PF00005 ABC transporter AFE_RS13185 PF01597 Glycine cleavage H-protein AFE_RS13205 PF13686 DsrE/DsrF/DrsH-like family AFE_RS13220 PF00092 von Willebrand factor type A domain AFE_RS13230 PF03167 Uracil DNA glycosylase superfamily AFE_RS13240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AFE_RS13255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AFE_RS13270 PF00005 ABC transporter AFE_RS13270 PF16326 ABC transporter C-terminal domain AFE_RS13270 PF12848 ABC transporter AFE_RS13285 PF03717 Penicillin-binding Protein dimerisation domain AFE_RS13285 PF00905 Penicillin binding protein transpeptidase domain AFE_RS13300 PF00348 Polyprenyl synthetase AFE_RS13310 PF02954 Bacterial regulatory protein, Fis family AFE_RS13310 PF00072 Response regulator receiver domain AFE_RS13310 PF00158 Sigma-54 interaction domain AFE_RS13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS13315 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS13315 PF00989 PAS fold AFE_RS13325 PF14403 Circularly permuted ATP-grasp type 2 AFE_RS13330 PF04168 A predicted alpha-helical domain with a conserved ER motif. AFE_RS13330 PF14403 Circularly permuted ATP-grasp type 2 AFE_RS13340 PF06798 PrkA serine protein kinase C-terminal domain AFE_RS13340 PF08298 PrkA AAA domain AFE_RS13345 PF00909 Ammonium Transporter Family AFE_RS13350 PF04285 Protein of unknown function (DUF444) AFE_RS13355 PF04293 SpoVR like protein AFE_RS13365 PF00543 Nitrogen regulatory protein P-II AFE_RS13370 PF00909 Ammonium Transporter Family AFE_RS13375 PF00117 Glutamine amidotransferase class-I AFE_RS13375 PF00958 GMP synthase C terminal domain AFE_RS13390 PF03330 Lytic transglycolase AFE_RS13390 PF05036 Sporulation related domain AFE_RS13400 PF02254 TrkA-N domain AFE_RS13400 PF07885 Ion channel AFE_RS13405 PF07943 Penicillin-binding protein 5, C-terminal domain AFE_RS13405 PF00768 D-alanyl-D-alanine carboxypeptidase AFE_RS13410 PF00342 Phosphoglucose isomerase AFE_RS13420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AFE_RS13440 PF06736 Protein of unknown function (DUF1211) AFE_RS13445 PF17946 RecC C-terminal domain AFE_RS13450 PF12705 PD-(D/E)XK nuclease superfamily AFE_RS13450 PF00580 UvrD/REP helicase N-terminal domain AFE_RS13450 PF13361 UvrD-like helicase C-terminal domain AFE_RS13455 PF13538 UvrD-like helicase C-terminal domain AFE_RS13505 PF00690 Cation transporter/ATPase, N-terminus AFE_RS13505 PF00689 Cation transporting ATPase, C-terminus AFE_RS13510 PF01641 SelR domain AFE_RS13515 PF01625 Peptide methionine sulfoxide reductase AFE_RS13525 PF01467 Cytidylyltransferase-like AFE_RS13535 PF02590 Predicted SPOUT methyltransferase AFE_RS13550 PF02545 Maf-like protein AFE_RS13555 PF10150 Ribonuclease E/G family AFE_RS13555 PF00575 S1 RNA binding domain AFE_RS13560 PF00072 Response regulator receiver domain AFE_RS13560 PF00158 Sigma-54 interaction domain AFE_RS13570 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS13580 PF04362 Bacterial Fe(2+) trafficking AFE_RS13585 PF01050 Mannose-6-phosphate isomerase AFE_RS13585 PF00483 Nucleotidyl transferase AFE_RS13595 PF01061 ABC-2 type transporter AFE_RS13600 PF00005 ABC transporter AFE_RS13625 PF01507 Phosphoadenosine phosphosulfate reductase family AFE_RS13630 PF00009 Elongation factor Tu GTP binding domain AFE_RS13640 PF00459 Inositol monophosphatase family AFE_RS13650 PF02563 Polysaccharide biosynthesis/export protein AFE_RS13655 PF13439 Glycosyltransferase Family 4 AFE_RS13655 PF00534 Glycosyl transferases group 1 AFE_RS13660 PF16363 GDP-mannose 4,6 dehydratase AFE_RS13665 PF08241 Methyltransferase domain AFE_RS13685 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AFE_RS13695 PF00005 ABC transporter AFE_RS13695 PF00664 ABC transporter transmembrane region AFE_RS13700 PF13673 Acetyltransferase (GNAT) domain AFE_RS13710 PF00005 ABC transporter AFE_RS13710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFE_RS13715 PF00005 ABC transporter AFE_RS13715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFE_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component AFE_RS13720 PF12911 N-terminal TM domain of oligopeptide transport permease C AFE_RS13725 PF00528 Binding-protein-dependent transport system inner membrane component AFE_RS13750 PF01914 MarC family integral membrane protein AFE_RS13755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AFE_RS13755 PF00056 lactate/malate dehydrogenase, NAD binding domain AFE_RS13765 PF01618 MotA/TolQ/ExbB proton channel family AFE_RS13770 PF02472 Biopolymer transport protein ExbD/TolR AFE_RS13785 PF16197 Ketoacyl-synthetase C-terminal extension AFE_RS13785 PF00109 Beta-ketoacyl synthase, N-terminal domain AFE_RS13785 PF02801 Beta-ketoacyl synthase, C-terminal domain AFE_RS13785 PF00107 Zinc-binding dehydrogenase AFE_RS13785 PF14765 Polyketide synthase dehydratase AFE_RS13785 PF00550 Phosphopantetheine attachment site AFE_RS13785 PF00698 Acyl transferase domain AFE_RS13785 PF08659 KR domain AFE_RS13785 PF08240 Alcohol dehydrogenase GroES-like domain AFE_RS13790 PF00155 Aminotransferase class I and II AFE_RS13795 PF05159 Capsule polysaccharide biosynthesis protein AFE_RS13800 PF05159 Capsule polysaccharide biosynthesis protein AFE_RS13805 PF00106 short chain dehydrogenase AFE_RS13815 PF10576 Iron-sulfur binding domain of endonuclease III AFE_RS13815 PF00730 HhH-GPD superfamily base excision DNA repair protein AFE_RS13815 PF14815 NUDIX domain AFE_RS13815 PF00633 Helix-hairpin-helix motif AFE_RS13825 PF00391 PEP-utilising enzyme, mobile domain AFE_RS13825 PF02896 PEP-utilising enzyme, TIM barrel domain AFE_RS13825 PF05524 PEP-utilising enzyme, N-terminal AFE_RS13830 PF00381 PTS HPr component phosphorylation site AFE_RS13840 PF03668 P-loop ATPase protein family AFE_RS13845 PF07475 HPr Serine kinase C-terminal domain AFE_RS13845 PF02603 HPr Serine kinase N terminus AFE_RS13850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFE_RS13850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFE_RS13855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AFE_RS13860 PF04552 Sigma-54, DNA binding domain AFE_RS13860 PF04963 Sigma-54 factor, core binding domain AFE_RS13860 PF00309 Sigma-54 factor, Activator interacting domain (AID) AFE_RS13865 PF00005 ABC transporter AFE_RS13870 PF03968 OstA-like protein AFE_RS13885 PF01380 SIS domain AFE_RS13885 PF00571 CBS domain AFE_RS13900 PF00483 Nucleotidyl transferase AFE_RS13905 PF01636 Phosphotransferase enzyme family AFE_RS13910 PF03968 OstA-like protein AFE_RS13910 PF04453 LPS transport system D AFE_RS13915 PF00639 PPIC-type PPIASE domain AFE_RS13915 PF09312 SurA N-terminal domain AFE_RS13920 PF01061 ABC-2 type transporter AFE_RS13925 PF01722 BolA-like protein AFE_RS13930 PF00462 Glutaredoxin AFE_RS13935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFE_RS13940 PF01634 ATP phosphoribosyltransferase AFE_RS13945 PF00815 Histidinol dehydrogenase AFE_RS13950 PF00155 Aminotransferase class I and II AFE_RS13955 PF00475 Imidazoleglycerol-phosphate dehydratase AFE_RS13960 PF00117 Glutamine amidotransferase class-I AFE_RS13965 PF00977 Histidine biosynthesis protein AFE_RS13970 PF00977 Histidine biosynthesis protein AFE_RS13975 PF01502 Phosphoribosyl-AMP cyclohydrolase AFE_RS13975 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AFE_RS13980 PF02416 mttA/Hcf106 family AFE_RS13985 PF02416 mttA/Hcf106 family AFE_RS13990 PF00902 Sec-independent protein translocase protein (TatC) AFE_RS13995 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AFE_RS13995 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AFE_RS14000 PF00101 Ribulose bisphosphate carboxylase, small chain AFE_RS14005 PF07728 AAA domain (dynein-related subfamily) AFE_RS14005 PF08406 CbbQ/NirQ/NorQ C-terminal AFE_RS14015 PF00563 EAL domain AFE_RS14015 PF00990 Diguanylate cyclase, GGDEF domain AFE_RS14015 PF03707 Bacterial signalling protein N terminal repeat AFE_RS14020 PF01979 Amidohydrolase family AFE_RS14025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFE_RS14025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFE_RS14030 PF00156 Phosphoribosyl transferase domain AFE_RS14035 PF03652 Holliday junction resolvase AFE_RS14040 PF02622 Uncharacterized ACR, COG1678 AFE_RS14045 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AFE_RS14045 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AFE_RS14055 PF00285 Citrate synthase, C-terminal domain AFE_RS14060 PF01521 Iron-sulphur cluster biosynthesis AFE_RS14065 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFE_RS14065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFE_RS14070 PF02780 Transketolase, C-terminal domain AFE_RS14070 PF00364 Biotin-requiring enzyme AFE_RS14070 PF02779 Transketolase, pyrimidine binding domain AFE_RS14075 PF00676 Dehydrogenase E1 component AFE_RS14090 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFE_RS14090 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFE_RS14095 PF00380 Ribosomal protein S9/S16 AFE_RS14100 PF00572 Ribosomal protein L13 AFE_RS14120 PF00881 Nitroreductase family AFE_RS14150 PF00579 tRNA synthetases class I (W and Y) AFE_RS14155 PF00689 Cation transporting ATPase, C-terminus AFE_RS14155 PF00690 Cation transporter/ATPase, N-terminus AFE_RS14160 PF02261 Aspartate decarboxylase AFE_RS14170 PF01926 50S ribosome-binding GTPase AFE_RS14175 PF07885 Ion channel AFE_RS14175 PF02254 TrkA-N domain AFE_RS14180 PF01612 3'-5' exonuclease AFE_RS14180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFE_RS14180 PF01367 5'-3' exonuclease, C-terminal SAM fold AFE_RS14180 PF00476 DNA polymerase family A AFE_RS14185 PF03641 Possible lysine decarboxylase AFE_RS14195 PF01636 Phosphotransferase enzyme family AFE_RS14215 PF13361 UvrD-like helicase C-terminal domain AFE_RS14215 PF00580 UvrD/REP helicase N-terminal domain AFE_RS14220 PF01556 DnaJ C terminal domain AFE_RS14220 PF00226 DnaJ domain AFE_RS14230 PF00156 Phosphoribosyl transferase domain AFE_RS14230 PF05139 Erythromycin esterase AFE_RS14235 PF14791 DNA polymerase beta thumb AFE_RS14235 PF14716 Helix-hairpin-helix domain AFE_RS14235 PF02811 PHP domain AFE_RS14245 PF00106 short chain dehydrogenase AFE_RS14250 PF00033 Cytochrome b/b6/petB AFE_RS14250 PF00032 Cytochrome b(C-terminal)/b6/petD AFE_RS14260 PF05140 ResB-like family AFE_RS14265 PF01578 Cytochrome C assembly protein AFE_RS14310 PF00175 Oxidoreductase NAD-binding domain AFE_RS14310 PF00258 Flavodoxin AFE_RS14310 PF00667 FAD binding domain AFE_RS14315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFE_RS14315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFE_RS14320 PF01507 Phosphoadenosine phosphosulfate reductase family AFE_RS14325 PF01507 Phosphoadenosine phosphosulfate reductase family AFE_RS14330 PF00009 Elongation factor Tu GTP binding domain AFE_RS14335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFE_RS14355 PF02416 mttA/Hcf106 family AFE_RS14375 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS14375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS14380 PF00072 Response regulator receiver domain AFE_RS14395 PF02082 Transcriptional regulator AFE_RS14400 PF07690 Major Facilitator Superfamily AFE_RS14405 PF01040 UbiA prenyltransferase family AFE_RS14415 PF00127 Copper binding proteins, plastocyanin/azurin family AFE_RS14425 PF00115 Cytochrome C and Quinol oxidase polypeptide I AFE_RS14430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AFE_RS14440 PF00034 Cytochrome c AFE_RS14460 PF00183 Hsp90 protein AFE_RS14460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS14470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFE_RS14470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFE_RS14485 PF00005 ABC transporter AFE_RS14520 PF00106 short chain dehydrogenase AFE_RS14525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFE_RS14550 PF01695 IstB-like ATP binding protein AFE_RS14555 PF00665 Integrase core domain AFE_RS14565 PF05598 Transposase domain (DUF772) AFE_RS14565 PF01609 Transposase DDE domain AFE_RS14580 PF02371 Transposase IS116/IS110/IS902 family AFE_RS14580 PF01548 Transposase AFE_RS14590 PF01609 Transposase DDE domain AFE_RS14590 PF05598 Transposase domain (DUF772) AFE_RS14600 PF14338 Mrr N-terminal domain AFE_RS14600 PF04471 Restriction endonuclease AFE_RS14625 PF01555 DNA methylase AFE_RS14635 PF17191 RecG wedge domain AFE_RS14635 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AFE_RS14635 PF00270 DEAD/DEAH box helicase AFE_RS14650 PF13401 AAA domain AFE_RS14650 PF11426 Tn7 transposition regulator TnsC AFE_RS14655 PF00665 Integrase core domain AFE_RS14660 PF08722 TnsA endonuclease N terminal AFE_RS14660 PF08721 TnsA endonuclease C terminal AFE_RS14665 PF01380 SIS domain AFE_RS14670 PF00132 Bacterial transferase hexapeptide (six repeats) AFE_RS14670 PF12804 MobA-like NTP transferase domain AFE_RS14670 PF14602 Hexapeptide repeat of succinyl-transferase AFE_RS14675 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AFE_RS14675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AFE_RS14680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFE_RS14680 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFE_RS14685 PF00231 ATP synthase AFE_RS14690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFE_RS14690 PF00306 ATP synthase alpha/beta chain, C terminal domain AFE_RS14690 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFE_RS14695 PF00213 ATP synthase delta (OSCP) subunit AFE_RS14700 PF00430 ATP synthase B/B' CF(0) AFE_RS14705 PF00137 ATP synthase subunit C AFE_RS14710 PF00119 ATP synthase A chain AFE_RS14720 PF02195 ParB-like nuclease domain AFE_RS14720 PF17762 HTH domain found in ParB protein AFE_RS14725 PF13614 AAA domain AFE_RS14730 PF02527 rRNA small subunit methyltransferase G AFE_RS14735 PF01134 Glucose inhibited division protein A AFE_RS14735 PF13932 GidA associated domain AFE_RS14750 PF00994 Probable molybdopterin binding domain AFE_RS14780 PF03358 NADPH-dependent FMN reductase AFE_RS14785 PF02678 Pirin AFE_RS14785 PF05726 Pirin C-terminal cupin domain AFE_RS14820 PF01061 ABC-2 type transporter AFE_RS14825 PF00005 ABC transporter AFE_RS14830 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AFE_RS14840 PF03232 Ubiquinone biosynthesis protein COQ7 AFE_RS14845 PF02082 Transcriptional regulator AFE_RS14855 PF00218 Indole-3-glycerol phosphate synthase AFE_RS14860 PF02885 Glycosyl transferase family, helical bundle domain AFE_RS14860 PF00591 Glycosyl transferase family, a/b domain AFE_RS14865 PF00117 Glutamine amidotransferase class-I AFE_RS14870 PF00425 chorismate binding enzyme AFE_RS14870 PF04715 Anthranilate synthase component I, N terminal region AFE_RS14875 PF13419 Haloacid dehalogenase-like hydrolase AFE_RS14880 PF00834 Ribulose-phosphate 3 epimerase family AFE_RS14885 PF01116 Fructose-bisphosphate aldolase class-II AFE_RS14890 PF02887 Pyruvate kinase, alpha/beta domain AFE_RS14890 PF00224 Pyruvate kinase, barrel domain AFE_RS14895 PF00162 Phosphoglycerate kinase AFE_RS14900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFE_RS14900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFE_RS14905 PF00456 Transketolase, thiamine diphosphate binding domain AFE_RS14905 PF02779 Transketolase, pyrimidine binding domain AFE_RS14905 PF02780 Transketolase, C-terminal domain AFE_RS14910 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AFE_RS14915 PF00459 Inositol monophosphatase family AFE_RS14925 PF04452 RNA methyltransferase AFE_RS14930 PF02401 LytB protein AFE_RS14935 PF02646 RmuC family AFE_RS14940 PF01741 Large-conductance mechanosensitive channel, MscL AFE_RS14950 PF00873 AcrB/AcrD/AcrF family AFE_RS14960 PF13533 Biotin-lipoyl like AFE_RS14970 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AFE_RS15000 PF00072 Response regulator receiver domain AFE_RS15000 PF00486 Transcriptional regulatory protein, C terminal AFE_RS15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFE_RS15005 PF00672 HAMP domain AFE_RS15005 PF00512 His Kinase A (phospho-acceptor) domain AFE_RS15015 PF14698 Argininosuccinate lyase C-terminal AFE_RS15015 PF00206 Lyase AFE_RS15025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFE_RS15025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFE_RS15030 PF01161 Phosphatidylethanolamine-binding protein AFE_RS15045 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AFE_RS15045 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFE_RS15055 PF13183 4Fe-4S dicluster domain AFE_RS15055 PF02754 Cysteine-rich domain AFE_RS15055 PF02665 Nitrate reductase gamma subunit AFE_RS15060 PF00374 Nickel-dependent hydrogenase AFE_RS15065 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AFE_RS15070 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFE_RS15075 PF01455 HupF/HypC family AFE_RS15080 PF01924 Hydrogenase formation hypA family AFE_RS15085 PF16363 GDP-mannose 4,6 dehydratase AFE_RS15090 PF16363 GDP-mannose 4,6 dehydratase AFE_RS15095 PF01050 Mannose-6-phosphate isomerase AFE_RS15095 PF00483 Nucleotidyl transferase AFE_RS15100 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AFE_RS15105 PF00483 Nucleotidyl transferase AFE_RS15110 PF07690 Major Facilitator Superfamily AFE_RS15120 PF00490 Delta-aminolevulinic acid dehydratase AFE_RS15130 PF03900 Porphobilinogen deaminase, C-terminal domain AFE_RS15130 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AFE_RS15140 PF01230 HIT domain AFE_RS15145 PF00202 Aminotransferase class-III AFE_RS15150 PF02581 Thiamine monophosphate synthase AFE_RS15155 PF08543 Phosphomethylpyrimidine kinase AFE_RS15160 PF00106 short chain dehydrogenase AFE_RS15165 PF11638 DnaA N-terminal domain AFE_RS15165 PF00308 Bacterial dnaA protein AFE_RS15165 PF08299 Bacterial dnaA protein helix-turn-helix AFE_RS15215 PF02567 Phenazine biosynthesis-like protein AFE_RS15220 PF00589 Phage integrase family AFE_RS15225 PF00717 Peptidase S24-like AFE_RS15225 PF01381 Helix-turn-helix AFE_RS15235 PF10145 Phage-related minor tail protein AFE_RS15235 PF01464 Transglycosylase SLT domain AFE_RS15235 PF01551 Peptidase family M23 AFE_RS15245 PF01734 Patatin-like phospholipase AFE_RS15255 PF13181 Tetratricopeptide repeat AFE_RS15260 PF10548 P22AR C-terminal domain AFE_RS15260 PF02498 BRO family, N-terminal domain AFE_RS15315 PF01555 DNA methylase AFE_RS15345 PF08346 AntA/AntB antirepressor AFE_RS15345 PF10548 P22AR C-terminal domain AFE_RS15355 PF00535 Glycosyl transferase family 2 AFE_RS15370 PF00990 Diguanylate cyclase, GGDEF domain AFE_RS15370 PF03707 Bacterial signalling protein N terminal repeat AFE_RS15370 PF13188 PAS domain AFE_RS15370 PF00563 EAL domain AFE_RS15400 PF00534 Glycosyl transferases group 1 AFE_RS15400 PF13439 Glycosyltransferase Family 4