LFERR_RS00015 PF00308 Bacterial dnaA protein LFERR_RS00015 PF08299 Bacterial dnaA protein helix-turn-helix LFERR_RS00015 PF11638 DnaA N-terminal domain LFERR_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain LFERR_RS00020 PF02767 DNA polymerase III beta subunit, central domain LFERR_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain LFERR_RS00025 PF02463 RecF/RecN/SMC N terminal domain LFERR_RS00030 PF00204 DNA gyrase B LFERR_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus LFERR_RS00030 PF01751 Toprim domain LFERR_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS00035 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS00040 PF05229 LFERR_RS00040 LFERR_RS00045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFERR_RS00050 PF00577 Outer membrane usher protein LFERR_RS00050 PF13953 PapC C-terminal domain LFERR_RS00055 PF05229 LFERR_RS00055 LFERR_RS00060 PF03776 Septum formation topological specificity factor MinE LFERR_RS00065 PF10387 Protein of unknown function (DUF2442) LFERR_RS00070 PF03776 Septum formation topological specificity factor MinE LFERR_RS00075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFERR_RS00080 PF03775 Septum formation inhibitor MinC, C-terminal domain LFERR_RS00080 PF05209 Septum formation inhibitor MinC, N-terminal domain LFERR_RS00085 PF00037 4Fe-4S binding domain LFERR_RS00085 PF11953 Domain of unknown function (DUF3470) LFERR_RS00090 PF01131 DNA topoisomerase LFERR_RS00090 PF01396 LFERR_RS00090 LFERR_RS00090 PF01751 Toprim domain LFERR_RS00095 PF04361 LFERR_RS00095 LFERR_RS00100 PF02481 DNA recombination-mediator protein A LFERR_RS00105 PF01476 LysM domain LFERR_RS00110 PF01327 Polypeptide deformylase LFERR_RS00115 PF00551 Formyl transferase LFERR_RS00115 PF02911 Formyl transferase, C-terminal domain LFERR_RS00120 PF01029 NusB family LFERR_RS00120 PF01189 NOL1/NOP2/sun family LFERR_RS00125 PF14334 LFERR_RS00125 LFERR_RS00130 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS00130 PF00672 HAMP domain LFERR_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS00135 PF00072 Response regulator receiver domain LFERR_RS00135 PF00158 Sigma-54 interaction domain LFERR_RS00135 PF02954 Bacterial regulatory protein, Fis family LFERR_RS00140 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS00140 PF00672 HAMP domain LFERR_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS00145 PF00072 Response regulator receiver domain LFERR_RS00145 PF00158 Sigma-54 interaction domain LFERR_RS00145 PF02954 Bacterial regulatory protein, Fis family LFERR_RS00150 PF01011 PQQ enzyme repeat LFERR_RS00150 PF13360 PQQ-like domain LFERR_RS00160 PF01926 50S ribosome-binding GTPase LFERR_RS00160 PF10396 GTP-binding protein TrmE N-terminus LFERR_RS00160 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE LFERR_RS00165 PF02096 60Kd inner membrane protein LFERR_RS00165 PF14849 YidC periplasmic domain LFERR_RS00170 PF01809 LFERR_RS00170 LFERR_RS00175 PF00825 Ribonuclease P LFERR_RS00180 PF00468 Ribosomal protein L34 LFERR_RS00185 PF00005 ABC transporter LFERR_RS00185 PF12848 ABC transporter LFERR_RS00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS00190 PF03466 LysR substrate binding domain LFERR_RS00195 PF13437 HlyD family secretion protein LFERR_RS00200 PF02321 Outer membrane efflux protein LFERR_RS00205 PF07690 Major Facilitator Superfamily LFERR_RS00210 PF03595 Voltage-dependent anion channel LFERR_RS00220 PF13531 Bacterial extracellular solute-binding protein LFERR_RS00225 PF04173 LFERR_RS00225 LFERR_RS00225 PF07680 LFERR_RS00225 LFERR_RS00230 PF00581 Rhodanese-like domain LFERR_RS00235 PF00581 Rhodanese-like domain LFERR_RS00240 PF08534 Redoxin LFERR_RS00245 PF04173 LFERR_RS00245 LFERR_RS00245 PF07680 LFERR_RS00245 LFERR_RS00250 PF13531 Bacterial extracellular solute-binding protein LFERR_RS00270 PF04143 LFERR_RS00270 LFERR_RS00275 PF01914 LFERR_RS00275 LFERR_RS00280 PF09723 LFERR_RS00280 LFERR_RS00285 PF00152 tRNA synthetases class II (D, K and N) LFERR_RS00285 PF01336 OB-fold nucleic acid binding domain LFERR_RS00285 PF02938 GAD domain LFERR_RS00290 PF02445 Quinolinate synthetase A protein LFERR_RS00295 PF01553 Acyltransferase LFERR_RS00300 PF01709 Transcriptional regulator LFERR_RS00305 PF02075 Crossover junction endodeoxyribonuclease RuvC LFERR_RS00310 PF01330 RuvA N terminal domain LFERR_RS00310 PF07499 RuvA, C-terminal domain LFERR_RS00310 PF14520 Helix-hairpin-helix domain LFERR_RS00315 PF05491 Holliday junction DNA helicase ruvB C-terminus LFERR_RS00315 PF05496 Holliday junction DNA helicase ruvB N-terminus LFERR_RS00320 PF03061 Thioesterase superfamily LFERR_RS00325 PF01618 LFERR_RS00325 LFERR_RS00330 PF02472 Biopolymer transport protein ExbD/TolR LFERR_RS00335 PF13103 TonB C terminal LFERR_RS00340 PF04052 TolB amino-terminal domain LFERR_RS00340 PF07676 WD40-like Beta Propeller Repeat LFERR_RS00345 PF06508 Queuosine biosynthesis protein QueC LFERR_RS00350 PF04055 Radical SAM superfamily LFERR_RS00350 PF13394 4Fe-4S single cluster domain LFERR_RS00355 PF13174 Tetratricopeptide repeat LFERR_RS00355 PF13432 Tetratricopeptide repeat LFERR_RS00360 PF00691 OmpA family LFERR_RS00370 PF02397 LFERR_RS00370 LFERR_RS00370 PF13727 CoA-binding domain LFERR_RS00375 PF02706 Chain length determinant protein LFERR_RS00380 PF13412 Winged helix-turn-helix DNA-binding LFERR_RS00385 PF13440 LFERR_RS00385 LFERR_RS00385 PF14667 Polysaccharide biosynthesis C-terminal domain LFERR_RS00390 PF13489 Methyltransferase domain LFERR_RS00395 PF00535 Glycosyl transferase family 2 LFERR_RS00400 PF00534 Glycosyl transferases group 1 LFERR_RS00400 PF13579 Glycosyl transferase 4-like domain LFERR_RS00410 PF00534 Glycosyl transferases group 1 LFERR_RS00410 PF13439 Glycosyltransferase Family 4 LFERR_RS00415 PF13641 Glycosyltransferase like family 2 LFERR_RS00420 PF00534 Glycosyl transferases group 1 LFERR_RS00435 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFERR_RS00440 PF01850 PIN domain LFERR_RS00450 PF05015 Plasmid maintenance system killer protein LFERR_RS00455 PF01381 Helix-turn-helix LFERR_RS00465 PF02661 Fic/DOC family LFERR_RS00465 PF13784 Fic/DOC family N-terminal LFERR_RS00475 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFERR_RS00480 PF08369 Proto-chlorophyllide reductase 57 kD subunit LFERR_RS00495 PF07681 LFERR_RS00495 LFERR_RS00495 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS00500 PF00857 Isochorismatase family LFERR_RS00505 PF13533 Biotin-lipoyl like LFERR_RS00510 PF00005 ABC transporter LFERR_RS00515 PF02687 LFERR_RS00515 LFERR_RS00515 PF12704 MacB-like periplasmic core domain LFERR_RS00525 PF01566 LFERR_RS00525 LFERR_RS00530 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS00530 PF00672 HAMP domain LFERR_RS00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS00535 PF00072 Response regulator receiver domain LFERR_RS00535 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS00540 PF02321 Outer membrane efflux protein LFERR_RS00545 PF16576 LFERR_RS00545 LFERR_RS00550 PF00873 AcrB/AcrD/AcrF family LFERR_RS00560 PF06041 Bacterial protein of unknown function (DUF924) LFERR_RS00565 PF07859 alpha/beta hydrolase fold LFERR_RS00570 PF03724 META domain LFERR_RS00570 PF04170 NlpE N-terminal domain LFERR_RS00570 PF09619 Type III secretion system lipoprotein chaperone (YscW) LFERR_RS00570 PF17185 LFERR_RS00570 LFERR_RS00575 PF08238 Sel1 repeat LFERR_RS00590 PF00027 Cyclic nucleotide-binding domain LFERR_RS00590 PF13545 Crp-like helix-turn-helix domain LFERR_RS00595 PF04305 LFERR_RS00595 LFERR_RS00600 PF00814 Glycoprotease family LFERR_RS00605 PF13432 Tetratricopeptide repeat LFERR_RS00610 PF02660 LFERR_RS00610 LFERR_RS00615 PF02152 Dihydroneopterin aldolase LFERR_RS00620 PF00919 Uncharacterized protein family UPF0004 LFERR_RS00620 PF01938 TRAM domain LFERR_RS00620 PF04055 Radical SAM superfamily LFERR_RS00625 PF00239 Resolvase, N terminal domain LFERR_RS00625 PF07508 Recombinase LFERR_RS00660 PF07120 LFERR_RS00660 LFERR_RS00665 PF01695 IstB-like ATP binding protein LFERR_RS00675 PF02086 D12 class N6 adenine-specific DNA methyltransferase LFERR_RS00680 PF00436 Single-strand binding protein family LFERR_RS00700 PF13401 AAA domain LFERR_RS00710 PF13592 LFERR_RS00710 LFERR_RS00715 PF00440 Bacterial regulatory proteins, tetR family LFERR_RS00735 PF03756 LFERR_RS00735 LFERR_RS00740 PF01593 Flavin containing amine oxidoreductase LFERR_RS00745 PF01370 NAD dependent epimerase/dehydratase family LFERR_RS00750 PF04966 Carbohydrate-selective porin, OprB family LFERR_RS00755 PF02308 LFERR_RS00755 LFERR_RS00765 PF01566 LFERR_RS00765 LFERR_RS00770 PF00376 MerR family regulatory protein LFERR_RS00770 PF09278 MerR, DNA binding LFERR_RS00775 PF03203 LFERR_RS00775 LFERR_RS00780 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS00785 PF00403 Heavy-metal-associated domain LFERR_RS00785 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS00790 PF03203 LFERR_RS00790 LFERR_RS00795 PF13411 MerR HTH family regulatory protein LFERR_RS00800 PF08240 Alcohol dehydrogenase GroES-like domain LFERR_RS00810 PF00122 E1-E2 ATPase LFERR_RS00810 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS00815 PF09851 LFERR_RS00815 LFERR_RS00825 PF02321 Outer membrane efflux protein LFERR_RS00830 PF16576 LFERR_RS00830 LFERR_RS00835 PF00873 AcrB/AcrD/AcrF family LFERR_RS00840 PF01292 Prokaryotic cytochrome b561 LFERR_RS00845 PF11604 Copper binding periplasmic protein CusF LFERR_RS00870 PF00665 Integrase core domain LFERR_RS00870 PF01527 Transposase LFERR_RS00870 PF13276 LFERR_RS00870 LFERR_RS00875 PF13744 Helix-turn-helix domain LFERR_RS00880 PF00873 AcrB/AcrD/AcrF family LFERR_RS00890 PF02321 Outer membrane efflux protein LFERR_RS00895 PF00122 E1-E2 ATPase LFERR_RS00895 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS00900 PF01022 Bacterial regulatory protein, arsR family LFERR_RS00905 PF00266 Aminotransferase class-V LFERR_RS00910 PF08241 Methyltransferase domain LFERR_RS00915 PF04399 Glutaredoxin 2, C terminal domain LFERR_RS00915 PF13417 Glutathione S-transferase, N-terminal domain LFERR_RS00920 PF12840 Helix-turn-helix domain LFERR_RS00925 PF09851 LFERR_RS00925 LFERR_RS00930 PF13649 Methyltransferase domain LFERR_RS00940 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS00945 PF01609 Transposase DDE domain LFERR_RS00945 PF13006 LFERR_RS00945 LFERR_RS00950 PF16277 LFERR_RS00950 LFERR_RS00960 PF11604 Copper binding periplasmic protein CusF LFERR_RS00970 PF00515 Tetratricopeptide repeat LFERR_RS00970 PF07721 Tetratricopeptide repeat LFERR_RS00970 PF13424 Tetratricopeptide repeat LFERR_RS00970 PF13432 Tetratricopeptide repeat LFERR_RS00970 PF14559 Tetratricopeptide repeat LFERR_RS00985 PF07642 LFERR_RS00985 LFERR_RS00990 PF02687 LFERR_RS00990 LFERR_RS00995 PF00005 ABC transporter LFERR_RS01000 PF00578 AhpC/TSA family LFERR_RS01005 PF11412 Disulphide bond corrector protein DsbC LFERR_RS01010 PF12840 Helix-turn-helix domain LFERR_RS01015 PF00122 E1-E2 ATPase LFERR_RS01015 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS01020 PF03625 Domain of unknown function DUF302 LFERR_RS01025 PF09851 LFERR_RS01025 LFERR_RS01030 PF00155 Aminotransferase class I and II LFERR_RS01035 PF01243 Pyridoxamine 5'-phosphate oxidase LFERR_RS01040 PF00665 Integrase core domain LFERR_RS01045 PF01695 IstB-like ATP binding protein LFERR_RS01070 PF00665 Integrase core domain LFERR_RS01070 PF09299 Mu transposase, C-terminal LFERR_RS01075 PF08721 TnsA endonuclease C terminal LFERR_RS01075 PF08722 TnsA endonuclease N terminal LFERR_RS01080 PF01939 Protein of unknown function DUF91 LFERR_RS01095 PF00271 Helicase conserved C-terminal domain LFERR_RS01095 PF04851 Type III restriction enzyme, res subunit LFERR_RS01095 PF08463 LFERR_RS01095 LFERR_RS01100 PF01420 Type I restriction modification DNA specificity domain LFERR_RS01105 PF02384 N-6 DNA Methylase LFERR_RS01105 PF12161 HsdM N-terminal domain LFERR_RS01110 PF01850 PIN domain LFERR_RS01125 PF13470 LFERR_RS01125 LFERR_RS01130 PF12728 Helix-turn-helix domain LFERR_RS01175 PF11843 LFERR_RS01175 LFERR_RS01185 PF00437 Type II/IV secretion system protein LFERR_RS01190 PF04956 LFERR_RS01190 LFERR_RS01195 PF05101 LFERR_RS01195 LFERR_RS01200 PF03135 LFERR_RS01200 LFERR_RS01220 PF04610 LFERR_RS01220 LFERR_RS01230 PF02594 Uncharacterised ACR, YggU family COG1872 LFERR_RS01245 PF04335 VirB8 protein LFERR_RS01250 PF03524 Conjugal transfer protein LFERR_RS01255 PF03524 Conjugal transfer protein LFERR_RS01260 PF03743 Bacterial conjugation TrbI-like protein LFERR_RS01270 PF01464 Transglycosylase SLT domain LFERR_RS01275 PF02534 Type IV secretory system Conjugative DNA transfer LFERR_RS01285 PF05016 Plasmid stabilisation system protein LFERR_RS01290 PF03050 LFERR_RS01290 LFERR_RS01290 PF13005 LFERR_RS01290 LFERR_RS01290 PF13007 LFERR_RS01290 LFERR_RS01290 PF13817 LFERR_RS01290 LFERR_RS01295 PF05717 LFERR_RS01295 LFERR_RS01310 PF13091 PLD-like domain LFERR_RS01320 PF02195 ParB-like nuclease domain LFERR_RS01325 PF13614 AAA domain LFERR_RS01340 PF10502 Signal peptidase, peptidase S26 LFERR_RS01370 PF01131 DNA topoisomerase LFERR_RS01370 PF01751 Toprim domain LFERR_RS01380 PF13672 Protein phosphatase 2C LFERR_RS01390 PF11074 LFERR_RS01390 LFERR_RS01395 PF13280 LFERR_RS01395 LFERR_RS01415 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LFERR_RS01420 PF13175 AAA ATPase domain LFERR_RS01425 PF00580 UvrD/REP helicase N-terminal domain LFERR_RS01440 PF01106 NifU-like domain LFERR_RS01445 PF13561 Enoyl-(Acyl carrier protein) reductase LFERR_RS01450 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase LFERR_RS01455 PF09678 LFERR_RS01455 LFERR_RS01470 PF04055 Radical SAM superfamily LFERR_RS01470 PF06969 HemN C-terminal domain LFERR_RS01475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS01475 PF03466 LysR substrate binding domain LFERR_RS01480 PF03573 outer membrane porin, OprD family LFERR_RS01500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFERR_RS01505 PF02582 LFERR_RS01505 LFERR_RS01510 PF01565 FAD binding domain LFERR_RS01510 PF02913 FAD linked oxidases, C-terminal domain LFERR_RS01515 PF01467 Cytidylyltransferase LFERR_RS01515 PF13580 SIS domain LFERR_RS01520 PF02021 Uncharacterised protein family UPF0102 LFERR_RS01525 PF04348 LppC putative lipoprotein LFERR_RS01530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFERR_RS01545 PF02498 LFERR_RS01545 LFERR_RS01550 PF01564 Spermine/spermidine synthase LFERR_RS01555 PF00581 Rhodanese-like domain LFERR_RS01565 PF13401 AAA domain LFERR_RS01575 PF00589 Phage integrase family LFERR_RS01575 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS01580 PF00589 Phage integrase family LFERR_RS01585 PF00589 Phage integrase family LFERR_RS01585 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS01590 PF00665 Integrase core domain LFERR_RS01600 PF04241 LFERR_RS01600 LFERR_RS01605 PF01988 LFERR_RS01605 LFERR_RS01610 PF00230 Major intrinsic protein LFERR_RS01615 PF00300 Histidine phosphatase superfamily (branch 1) LFERR_RS01620 PF01564 Spermine/spermidine synthase LFERR_RS01625 PF02675 S-adenosylmethionine decarboxylase LFERR_RS01630 PF00005 ABC transporter LFERR_RS01635 PF02405 LFERR_RS01635 LFERR_RS01640 PF02470 LFERR_RS01640 LFERR_RS01645 PF05494 Toluene tolerance, Ttg2 LFERR_RS01650 PF13466 STAS domain LFERR_RS01655 PF00005 ABC transporter LFERR_RS01660 PF01479 S4 domain LFERR_RS01665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LFERR_RS01670 PF14279 LFERR_RS01670 LFERR_RS01675 PF00398 Ribosomal RNA adenine dimethylase LFERR_RS01685 PF05036 Sporulation related domain LFERR_RS01690 PF00750 tRNA synthetases class I (R) LFERR_RS01690 PF03485 Arginyl tRNA synthetase N terminal domain LFERR_RS01690 PF05746 DALR anticodon binding domain LFERR_RS01695 PF07690 Major Facilitator Superfamily LFERR_RS01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS01700 PF03466 LysR substrate binding domain LFERR_RS01705 PF05175 Methyltransferase small domain LFERR_RS01710 PF03372 Endonuclease/Exonuclease/phosphatase family LFERR_RS01715 PF10084 LFERR_RS01715 LFERR_RS01720 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ LFERR_RS01725 PF00043 Glutathione S-transferase, C-terminal domain LFERR_RS01725 PF13417 Glutathione S-transferase, N-terminal domain LFERR_RS01730 PF03372 Endonuclease/Exonuclease/phosphatase family LFERR_RS01735 PF00762 Ferrochelatase LFERR_RS01740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFERR_RS01745 PF03702 Uncharacterised protein family (UPF0075) LFERR_RS01750 PF01488 Shikimate / quinate 5-dehydrogenase LFERR_RS01750 PF08501 Shikimate dehydrogenase substrate binding domain LFERR_RS01755 PF00437 Type II/IV secretion system protein LFERR_RS01755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LFERR_RS01760 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS01765 PF00072 Response regulator receiver domain LFERR_RS01765 PF00158 Sigma-54 interaction domain LFERR_RS01765 PF02954 Bacterial regulatory protein, Fis family LFERR_RS01770 PF01478 Type IV leader peptidase family LFERR_RS01770 PF06750 LFERR_RS01770 LFERR_RS01775 PF01121 Dephospho-CoA kinase LFERR_RS01780 PF07072 Protein of unknown function (DUF1342) LFERR_RS01785 PF00316 Fructose-1-6-bisphosphatase LFERR_RS01790 PF04386 Stringent starvation protein B LFERR_RS01795 PF01464 Transglycosylase SLT domain LFERR_RS01795 PF13511 LFERR_RS01795 LFERR_RS01800 PF02954 Bacterial regulatory protein, Fis family LFERR_RS01805 PF11906 LFERR_RS01805 LFERR_RS01805 PF13717 LFERR_RS01805 LFERR_RS01810 PF06325 Ribosomal protein L11 methyltransferase (PrmA) LFERR_RS01815 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain LFERR_RS01815 PF02785 Biotin carboxylase C-terminal domain LFERR_RS01815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFERR_RS01820 PF00364 Biotin-requiring enzyme LFERR_RS01825 PF01220 Dehydroquinase class II LFERR_RS01830 PF01638 HxlR-like helix-turn-helix LFERR_RS01835 PF11583 P-aminobenzoate N-oxygenase AurF LFERR_RS01840 PF00091 Tubulin/FtsZ family, GTPase domain LFERR_RS01840 PF12327 FtsZ family, C-terminal domain LFERR_RS01845 PF02491 SHS2 domain inserted in FTSA LFERR_RS01845 PF14450 Cell division protein FtsA LFERR_RS01850 PF03799 Cell division protein FtsQ LFERR_RS01850 PF08478 POTRA domain, FtsQ-type LFERR_RS01855 PF01820 D-ala D-ala ligase N-terminus LFERR_RS01855 PF07478 D-ala D-ala ligase C-terminus LFERR_RS01860 PF01565 FAD binding domain LFERR_RS01860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LFERR_RS01865 PF01225 Mur ligase family, catalytic domain LFERR_RS01865 PF02875 Mur ligase family, glutamate ligase domain LFERR_RS01865 PF08245 Mur ligase middle domain LFERR_RS01870 PF03033 Glycosyltransferase family 28 N-terminal domain LFERR_RS01870 PF04101 Glycosyltransferase family 28 C-terminal domain LFERR_RS01875 PF01098 LFERR_RS01875 LFERR_RS01880 PF02875 Mur ligase family, glutamate ligase domain LFERR_RS01880 PF08245 Mur ligase middle domain LFERR_RS01885 PF00953 Glycosyl transferase family 4 LFERR_RS01885 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LFERR_RS01890 PF01225 Mur ligase family, catalytic domain LFERR_RS01890 PF02875 Mur ligase family, glutamate ligase domain LFERR_RS01890 PF08245 Mur ligase middle domain LFERR_RS01895 PF02875 Mur ligase family, glutamate ligase domain LFERR_RS01895 PF08245 Mur ligase middle domain LFERR_RS01900 PF00905 Penicillin binding protein transpeptidase domain LFERR_RS01900 PF03717 Penicillin-binding Protein dimerisation domain LFERR_RS01905 PF04999 LFERR_RS01905 LFERR_RS01910 PF01795 MraW methylase family LFERR_RS01915 PF02381 MraZ protein LFERR_RS01920 PF01743 Poly A polymerase head domain LFERR_RS01920 PF01966 HD domain LFERR_RS01920 PF12627 Probable RNA and SrmB- binding site of polymerase A LFERR_RS01925 PF00501 AMP-binding enzyme LFERR_RS01930 PF13410 Glutathione S-transferase, C-terminal domain LFERR_RS01930 PF13417 Glutathione S-transferase, N-terminal domain LFERR_RS01935 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LFERR_RS01940 PF05258 LFERR_RS01940 LFERR_RS01945 PF01043 SecA preprotein cross-linking domain LFERR_RS01945 PF02810 SEC-C motif LFERR_RS01945 PF07516 SecA Wing and Scaffold domain LFERR_RS01945 PF07517 SecA DEAD-like domain LFERR_RS01950 PF01960 ArgJ family LFERR_RS01955 PF00293 NUDIX domain LFERR_RS01955 PF02581 Thiamine monophosphate synthase/TENI LFERR_RS01960 PF00535 Glycosyl transferase family 2 LFERR_RS01965 PF01522 Polysaccharide deacetylase LFERR_RS01970 PF13439 Glycosyltransferase Family 4 LFERR_RS01970 PF13692 Glycosyl transferases group 1 LFERR_RS01980 PF04932 LFERR_RS01980 LFERR_RS01985 PF00535 Glycosyl transferase family 2 LFERR_RS01990 PF00535 Glycosyl transferase family 2 LFERR_RS01995 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFERR_RS02000 PF13350 Tyrosine phosphatase family LFERR_RS02005 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LFERR_RS02010 PF03279 LFERR_RS02010 LFERR_RS02015 PF00155 Aminotransferase class I and II LFERR_RS02020 PF03781 Sulfatase-modifying factor enzyme 1 LFERR_RS02020 PF12867 DinB superfamily LFERR_RS02020 PF13847 Methyltransferase domain LFERR_RS02025 PF00588 SpoU rRNA Methylase family LFERR_RS02035 PF00155 Aminotransferase class I and II LFERR_RS02040 PF12697 Alpha/beta hydrolase family LFERR_RS02045 PF08241 Methyltransferase domain LFERR_RS02050 PF13500 AAA domain LFERR_RS02055 PF01435 Peptidase family M48 LFERR_RS02060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LFERR_RS02065 PF04376 LFERR_RS02065 LFERR_RS02065 PF04377 LFERR_RS02065 LFERR_RS02070 PF03649 LFERR_RS02070 LFERR_RS02075 PF00929 Exonuclease LFERR_RS02080 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS02080 PF00175 Oxidoreductase NAD-binding domain LFERR_RS02080 PF00970 Oxidoreductase FAD-binding domain LFERR_RS02090 PF12674 LFERR_RS02090 LFERR_RS02100 PF00440 Bacterial regulatory proteins, tetR family LFERR_RS02105 PF00696 Amino acid kinase family LFERR_RS02110 PF16576 LFERR_RS02110 LFERR_RS02115 PF09411 Lipid A 3-O-deacylase (PagL) LFERR_RS02120 PF04055 Radical SAM superfamily LFERR_RS02120 PF06968 Biotin and Thiamin Synthesis associated domain LFERR_RS02125 PF02594 Uncharacterised ACR, YggU family COG1872 LFERR_RS02130 PF02325 LFERR_RS02130 LFERR_RS02135 PF03807 NADP oxidoreductase coenzyme F420-dependent LFERR_RS02135 PF14748 Pyrroline-5-carboxylate reductase dimerisation LFERR_RS02140 PF01168 Alanine racemase, N-terminal domain LFERR_RS02145 PF00437 Type II/IV secretion system protein LFERR_RS02150 PF00437 Type II/IV secretion system protein LFERR_RS02155 PF00535 Glycosyl transferase family 2 LFERR_RS02160 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS02170 PF00753 Metallo-beta-lactamase superfamily LFERR_RS02175 PF00027 Cyclic nucleotide-binding domain LFERR_RS02175 PF13545 Crp-like helix-turn-helix domain LFERR_RS02180 PF02390 Putative methyltransferase LFERR_RS02185 PF00731 AIR carboxylase LFERR_RS02190 PF02222 ATP-grasp domain LFERR_RS02195 PF02600 Disulfide bond formation protein DsbB LFERR_RS02200 PF13098 Thioredoxin-like domain LFERR_RS02205 PF13231 LFERR_RS02205 LFERR_RS02210 PF01668 SmpB protein LFERR_RS02215 PF13091 PLD-like domain LFERR_RS02220 PF03364 Polyketide cyclase / dehydrase and lipid transport LFERR_RS02225 PF04355 SmpA / OmlA family LFERR_RS02230 PF01475 Ferric uptake regulator family LFERR_RS02235 PF00696 Amino acid kinase family LFERR_RS02235 PF01472 PUA domain LFERR_RS02240 PF01018 GTP1/OBG LFERR_RS02240 PF01926 50S ribosome-binding GTPase LFERR_RS02245 PF01016 Ribosomal L27 protein LFERR_RS02250 PF00829 Ribosomal prokaryotic L21 protein LFERR_RS02255 PF00916 LFERR_RS02255 LFERR_RS02260 PF00484 Carbonic anhydrase LFERR_RS02265 PF01717 Cobalamin-independent synthase, Catalytic domain LFERR_RS02265 PF08267 Cobalamin-independent synthase, N-terminal domain LFERR_RS02270 PF01209 ubiE/COQ5 methyltransferase family LFERR_RS02275 PF13410 Glutathione S-transferase, C-terminal domain LFERR_RS02275 PF13417 Glutathione S-transferase, N-terminal domain LFERR_RS02280 PF07021 Methionine biosynthesis protein MetW LFERR_RS02285 PF00561 alpha/beta hydrolase fold LFERR_RS02295 PF00464 Serine hydroxymethyltransferase LFERR_RS02300 PF03477 ATP cone domain LFERR_RS02305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFERR_RS02305 PF01872 RibD C-terminal domain LFERR_RS02310 PF00677 Lumazine binding domain LFERR_RS02315 PF00925 GTP cyclohydrolase II LFERR_RS02315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFERR_RS02320 PF00885 6,7-dimethyl-8-ribityllumazine synthase LFERR_RS02325 PF01029 NusB family LFERR_RS02330 PF11154 LFERR_RS02330 LFERR_RS02335 PF08238 Sel1 repeat LFERR_RS02340 PF06305 LFERR_RS02340 LFERR_RS02345 PF03109 LFERR_RS02345 LFERR_RS02350 PF00691 OmpA family LFERR_RS02370 PF00009 Elongation factor Tu GTP binding domain LFERR_RS02370 PF03143 Elongation factor Tu C-terminal domain LFERR_RS02370 PF03144 Elongation factor Tu domain 2 LFERR_RS02380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LFERR_RS02385 PF00467 KOW motif LFERR_RS02385 PF02357 Transcription termination factor nusG LFERR_RS02390 PF00298 Ribosomal protein L11, RNA binding domain LFERR_RS02390 PF03946 Ribosomal protein L11, N-terminal domain LFERR_RS02395 PF00687 Ribosomal protein L1p/L10e family LFERR_RS02400 PF00466 Ribosomal protein L10 LFERR_RS02405 PF00542 Ribosomal protein L7/L12 C-terminal domain LFERR_RS02405 PF16320 LFERR_RS02405 LFERR_RS02410 PF00562 RNA polymerase Rpb2, domain 6 LFERR_RS02410 PF04560 RNA polymerase Rpb2, domain 7 LFERR_RS02410 PF04561 RNA polymerase Rpb2, domain 2 LFERR_RS02410 PF04563 RNA polymerase beta subunit LFERR_RS02410 PF04565 RNA polymerase Rpb2, domain 3 LFERR_RS02410 PF10385 RNA polymerase beta subunit external 1 domain LFERR_RS02415 PF00623 RNA polymerase Rpb1, domain 2 LFERR_RS02415 PF04983 RNA polymerase Rpb1, domain 3 LFERR_RS02415 PF04997 RNA polymerase Rpb1, domain 1 LFERR_RS02415 PF04998 RNA polymerase Rpb1, domain 5 LFERR_RS02415 PF05000 RNA polymerase Rpb1, domain 4 LFERR_RS02420 PF00164 Ribosomal protein S12/S23 LFERR_RS02425 PF00177 Ribosomal protein S7p/S5e LFERR_RS02430 PF00009 Elongation factor Tu GTP binding domain LFERR_RS02430 PF00679 Elongation factor G C-terminus LFERR_RS02430 PF03144 Elongation factor Tu domain 2 LFERR_RS02430 PF03764 Elongation factor G, domain IV LFERR_RS02430 PF14492 Elongation Factor G, domain II LFERR_RS02435 PF00009 Elongation factor Tu GTP binding domain LFERR_RS02435 PF03143 Elongation factor Tu C-terminal domain LFERR_RS02435 PF03144 Elongation factor Tu domain 2 LFERR_RS02440 PF00338 Ribosomal protein S10p/S20e LFERR_RS02445 PF00297 Ribosomal protein L3 LFERR_RS02450 PF00573 Ribosomal protein L4/L1 family LFERR_RS02455 PF00276 Ribosomal protein L23 LFERR_RS02460 PF00203 Ribosomal protein S19 LFERR_RS02465 PF00237 Ribosomal protein L22p/L17e LFERR_RS02470 PF00189 Ribosomal protein S3, C-terminal domain LFERR_RS02470 PF07650 KH domain LFERR_RS02475 PF00252 Ribosomal protein L16p/L10e LFERR_RS02480 PF00831 Ribosomal L29 protein LFERR_RS02485 PF00366 Ribosomal protein S17 LFERR_RS02490 PF00238 Ribosomal protein L14p/L23e LFERR_RS02495 PF00467 KOW motif LFERR_RS02495 PF17136 LFERR_RS02495 LFERR_RS02500 PF00281 Ribosomal protein L5 LFERR_RS02500 PF00673 ribosomal L5P family C-terminus LFERR_RS02505 PF00410 Ribosomal protein S8 LFERR_RS02510 PF00347 Ribosomal protein L6 LFERR_RS02515 PF00861 Ribosomal L18p/L5e family LFERR_RS02520 PF00333 Ribosomal protein S5, N-terminal domain LFERR_RS02520 PF03719 Ribosomal protein S5, C-terminal domain LFERR_RS02525 PF00327 Ribosomal protein L30p/L7e LFERR_RS02530 PF00828 Ribosomal protein L18e/L15 LFERR_RS02535 PF00344 SecY translocase LFERR_RS02540 PF00406 Adenylate kinase LFERR_RS02540 PF05191 Adenylate kinase, active site lid LFERR_RS02545 PF01176 Translation initiation factor 1A / IF-1 LFERR_RS02550 PF00416 Ribosomal protein S13/S18 LFERR_RS02555 PF00411 Ribosomal protein S11 LFERR_RS02560 PF00163 Ribosomal protein S4/S9 N-terminal domain LFERR_RS02560 PF01479 S4 domain LFERR_RS02565 PF01000 RNA polymerase Rpb3/RpoA insert domain LFERR_RS02565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LFERR_RS02565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LFERR_RS02570 PF01196 Ribosomal protein L17 LFERR_RS02575 PF00692 dUTPase LFERR_RS02580 PF02441 Flavoprotein LFERR_RS02580 PF04127 DNA / pantothenate metabolism flavoprotein LFERR_RS02585 PF04002 RadC-like JAB domain LFERR_RS02590 PF01219 Prokaryotic diacylglycerol kinase LFERR_RS02595 PF01569 PAP2 superfamily LFERR_RS02605 PF12732 LFERR_RS02605 LFERR_RS02610 PF13686 DsrE/DsrF/DrsH-like family LFERR_RS02615 PF00156 Phosphoribosyl transferase domain LFERR_RS02620 PF01048 Phosphorylase superfamily LFERR_RS02625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFERR_RS02625 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS02630 PF00462 Glutaredoxin LFERR_RS02630 PF08534 Redoxin LFERR_RS02635 PF12710 haloacid dehalogenase-like hydrolase LFERR_RS02640 PF00270 DEAD/DEAH box helicase LFERR_RS02640 PF00271 Helicase conserved C-terminal domain LFERR_RS02640 PF02559 CarD-like/TRCF domain LFERR_RS02640 PF03461 TRCF domain LFERR_RS02645 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LFERR_RS02650 PF02542 YgbB family LFERR_RS02655 PF01142 tRNA pseudouridine synthase D (TruD) LFERR_RS02660 PF00376 MerR family regulatory protein LFERR_RS02660 PF09278 MerR, DNA binding LFERR_RS02665 PF01713 Smr domain LFERR_RS02670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS02675 PF01580 FtsK/SpoIIIE family LFERR_RS02675 PF09397 Ftsk gamma domain LFERR_RS02675 PF13491 LFERR_RS02675 LFERR_RS02680 PF03548 Outer membrane lipoprotein carrier protein LolA LFERR_RS02685 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LFERR_RS02690 PF05496 Holliday junction DNA helicase ruvB N-terminus LFERR_RS02690 PF12002 MgsA AAA+ ATPase C terminal LFERR_RS02690 PF16193 LFERR_RS02690 LFERR_RS02695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFERR_RS02695 PF02403 Seryl-tRNA synthetase N-terminal domain LFERR_RS02700 PF07073 Modulator of Rho-dependent transcription termination (ROF) LFERR_RS02705 PF03734 L,D-transpeptidase catalytic domain LFERR_RS02740 PF02576 Uncharacterised BCR, YhbC family COG0779 LFERR_RS02745 PF00575 S1 RNA binding domain LFERR_RS02745 PF08529 NusA N-terminal domain LFERR_RS02745 PF13184 NusA-like KH domain LFERR_RS02745 PF14520 Helix-hairpin-helix domain LFERR_RS02750 PF00009 Elongation factor Tu GTP binding domain LFERR_RS02750 PF04760 Translation initiation factor IF-2, N-terminal region LFERR_RS02750 PF08364 LFERR_RS02750 LFERR_RS02750 PF11987 Translation-initiation factor 2 LFERR_RS02755 PF02033 Ribosome-binding factor A LFERR_RS02760 PF01509 TruB family pseudouridylate synthase (N terminal domain) LFERR_RS02760 PF09157 Pseudouridine synthase II TruB, C-terminal LFERR_RS02760 PF16198 LFERR_RS02760 LFERR_RS02765 PF00312 Ribosomal protein S15 LFERR_RS02770 PF00013 KH domain LFERR_RS02770 PF00575 S1 RNA binding domain LFERR_RS02770 PF01138 3' exoribonuclease family, domain 1 LFERR_RS02770 PF03725 3' exoribonuclease family, domain 2 LFERR_RS02770 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LFERR_RS02775 PF00675 Insulinase (Peptidase family M16) LFERR_RS02775 PF05193 Peptidase M16 inactive domain LFERR_RS02780 PF00753 Metallo-beta-lactamase superfamily LFERR_RS02780 PF16123 LFERR_RS02780 LFERR_RS02785 PF08241 Methyltransferase domain LFERR_RS02790 PF00075 RNase H LFERR_RS02795 PF00929 Exonuclease LFERR_RS02800 PF03259 Roadblock/LC7 domain LFERR_RS02805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFERR_RS02810 PF06865 Protein of unknown function (DUF1255) LFERR_RS02815 PF00764 Arginosuccinate synthase LFERR_RS02820 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFERR_RS02820 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFERR_RS02825 PF00202 Aminotransferase class-III LFERR_RS02830 PF00696 Amino acid kinase family LFERR_RS02830 PF01842 ACT domain LFERR_RS02830 PF13840 ACT domain LFERR_RS02835 PF11127 Protein of unknown function (DUF2892) LFERR_RS02840 PF08238 Sel1 repeat LFERR_RS02850 PF01850 PIN domain LFERR_RS02855 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFERR_RS02860 PF13633 Prokaryotic N-terminal methylation site LFERR_RS02870 PF00923 Transaldolase LFERR_RS02875 PF13561 Enoyl-(Acyl carrier protein) reductase LFERR_RS02880 PF01464 Transglycosylase SLT domain LFERR_RS02880 PF01476 LysM domain LFERR_RS02885 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFERR_RS02890 PF00330 Aconitase family (aconitate hydratase) LFERR_RS02890 PF00694 Aconitase C-terminal domain LFERR_RS02895 PF00180 Isocitrate/isopropylmalate dehydrogenase LFERR_RS02900 PF00549 CoA-ligase LFERR_RS02900 PF08442 ATP-grasp domain LFERR_RS02910 PF00549 CoA-ligase LFERR_RS02910 PF02629 CoA binding domain LFERR_RS02915 PF00795 Carbon-nitrogen hydrolase LFERR_RS02915 PF02540 NAD synthase LFERR_RS02920 PF00543 Nitrogen regulatory protein P-II LFERR_RS02925 PF13525 Outer membrane lipoprotein LFERR_RS02930 PF00849 RNA pseudouridylate synthase LFERR_RS02930 PF01479 S4 domain LFERR_RS02935 PF02578 Multi-copper polyphenol oxidoreductase laccase LFERR_RS02940 PF03079 ARD/ARD' family LFERR_RS02945 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LFERR_RS02950 PF12710 haloacid dehalogenase-like hydrolase LFERR_RS02955 PF00596 Class II Aldolase and Adducin N-terminal domain LFERR_RS02960 PF13740 ACT domain LFERR_RS02965 PF01327 Polypeptide deformylase LFERR_RS02970 PF13520 Amino acid permease LFERR_RS02975 PF16363 LFERR_RS02975 LFERR_RS02980 PF04321 RmlD substrate binding domain LFERR_RS02990 PF12112 Protein of unknown function (DUF3579) LFERR_RS02995 PF00483 Nucleotidyl transferase LFERR_RS03000 PF04367 LFERR_RS03000 LFERR_RS03005 PF00072 Response regulator receiver domain LFERR_RS03005 PF00158 Sigma-54 interaction domain LFERR_RS03005 PF02954 Bacterial regulatory protein, Fis family LFERR_RS03015 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS03015 PF00672 HAMP domain LFERR_RS03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS03020 PF02463 RecF/RecN/SMC N terminal domain LFERR_RS03025 PF01513 ATP-NAD kinase LFERR_RS03030 PF03309 Type III pantothenate kinase LFERR_RS03035 PF03099 Biotin/lipoate A/B protein ligase family LFERR_RS03040 PF00171 Aldehyde dehydrogenase family LFERR_RS03045 PF07690 Major Facilitator Superfamily LFERR_RS03050 PF06144 DNA polymerase III, delta subunit LFERR_RS03050 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LFERR_RS03055 PF04390 Lipopolysaccharide-assembly LFERR_RS03060 PF00133 tRNA synthetases class I (I, L, M and V) LFERR_RS03060 PF08264 Anticodon-binding domain of tRNA LFERR_RS03060 PF09334 tRNA synthetases class I (M) LFERR_RS03060 PF13603 Leucyl-tRNA synthetase, Domain 2 LFERR_RS03065 PF03358 NADPH-dependent FMN reductase LFERR_RS03070 PF04264 YceI-like domain LFERR_RS03075 PF01427 D-ala-D-ala dipeptidase LFERR_RS03080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFERR_RS03080 PF06827 Zinc finger found in FPG and IleRS LFERR_RS03080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFERR_RS03085 PF00581 Rhodanese-like domain LFERR_RS03090 PF01545 Cation efflux family LFERR_RS03090 PF16916 LFERR_RS03090 LFERR_RS03095 PF00120 Glutamine synthetase, catalytic domain LFERR_RS03095 PF03951 Glutamine synthetase, beta-Grasp domain LFERR_RS03100 PF13511 LFERR_RS03100 LFERR_RS03105 PF01975 Survival protein SurE LFERR_RS03110 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) LFERR_RS03115 PF00140 Sigma-70 factor, region 1 LFERR_RS03115 PF04539 Sigma-70 region 3 LFERR_RS03115 PF04542 Sigma-70 region 2 LFERR_RS03115 PF04545 Sigma-70, region 4 LFERR_RS03120 PF04430 Protein of unknown function (DUF498/DUF598) LFERR_RS03125 PF00155 Aminotransferase class I and II LFERR_RS03130 PF00742 Homoserine dehydrogenase LFERR_RS03130 PF01842 ACT domain LFERR_RS03130 PF03447 Homoserine dehydrogenase, NAD binding domain LFERR_RS03135 PF00291 Pyridoxal-phosphate dependent enzyme LFERR_RS03150 PF04014 Antidote-toxin recognition MazE LFERR_RS03155 PF01850 PIN domain LFERR_RS03160 PF00472 RF-1 domain LFERR_RS03160 PF03462 PCRF domain LFERR_RS03165 PF00152 tRNA synthetases class II (D, K and N) LFERR_RS03165 PF01336 OB-fold nucleic acid binding domain LFERR_RS03170 PF02687 LFERR_RS03170 LFERR_RS03170 PF12704 MacB-like periplasmic core domain LFERR_RS03175 PF00005 ABC transporter LFERR_RS03180 PF09835 LFERR_RS03180 LFERR_RS03185 PF03772 LFERR_RS03185 LFERR_RS03190 PF01618 LFERR_RS03190 LFERR_RS03195 PF02472 Biopolymer transport protein ExbD/TolR LFERR_RS03200 PF04028 LFERR_RS03200 LFERR_RS03205 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LFERR_RS03210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LFERR_RS03215 PF03966 Trm112p-like protein LFERR_RS03220 PF02348 Cytidylyltransferase LFERR_RS03225 PF00719 Inorganic pyrophosphatase LFERR_RS03235 PF00589 Phage integrase family LFERR_RS03245 PF00132 Bacterial transferase hexapeptide (six repeats) LFERR_RS03245 PF14602 Hexapeptide repeat of succinyl-transferase LFERR_RS03255 PF07366 SnoaL-like polyketide cyclase LFERR_RS03265 PF12680 SnoaL-like domain LFERR_RS03270 PF06983 3-demethylubiquinone-9 3-methyltransferase LFERR_RS03285 PF00665 Integrase core domain LFERR_RS03290 PF00589 Phage integrase family LFERR_RS03290 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS03295 PF00589 Phage integrase family LFERR_RS03300 PF00589 Phage integrase family LFERR_RS03300 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS03310 PF13401 AAA domain LFERR_RS03325 PF10387 Protein of unknown function (DUF2442) LFERR_RS03335 PF03167 Uracil DNA glycosylase superfamily LFERR_RS03340 PF02696 LFERR_RS03340 LFERR_RS03345 PF00004 ATPase family associated with various cellular activities (AAA) LFERR_RS03345 PF02861 Clp amino terminal domain LFERR_RS03345 PF07724 AAA domain (Cdc48 subfamily) LFERR_RS03345 PF10431 C-terminal, D2-small domain, of ClpB protein LFERR_RS03350 PF02617 ATP-dependent Clp protease adaptor protein ClpS LFERR_RS03355 PF13616 PPIC-type PPIASE domain LFERR_RS03360 PF01965 DJ-1/PfpI family LFERR_RS03365 PF03572 Peptidase family S41 LFERR_RS03365 PF13180 PDZ domain LFERR_RS03370 PF01551 Peptidase family M23 LFERR_RS03375 PF01676 Metalloenzyme superfamily LFERR_RS03375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LFERR_RS03380 PF00343 Carbohydrate phosphorylase LFERR_RS03385 PF10116 LFERR_RS03385 LFERR_RS03390 PF00581 Rhodanese-like domain LFERR_RS03395 PF00294 pfkB family carbohydrate kinase LFERR_RS03400 PF13505 Outer membrane protein beta-barrel domain LFERR_RS03405 PF00438 S-adenosylmethionine synthetase, N-terminal domain LFERR_RS03405 PF02772 S-adenosylmethionine synthetase, central domain LFERR_RS03405 PF02773 S-adenosylmethionine synthetase, C-terminal domain LFERR_RS03410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LFERR_RS03410 PF05221 S-adenosyl-L-homocysteine hydrolase LFERR_RS03415 PF02219 Methylenetetrahydrofolate reductase LFERR_RS03420 PF00485 Phosphoribulokinase / Uridine kinase family LFERR_RS03425 PF01569 PAP2 superfamily LFERR_RS03430 PF05670 LFERR_RS03430 LFERR_RS03430 PF05833 Fibronectin-binding protein A N-terminus (FbpA) LFERR_RS03435 PF01583 Adenylylsulphate kinase LFERR_RS03435 PF01747 ATP-sulfurylase LFERR_RS03435 PF14306 PUA-like domain LFERR_RS03440 PF00156 Phosphoribosyl transferase domain LFERR_RS03445 PF00118 TCP-1/cpn60 chaperonin family LFERR_RS03450 PF00166 Chaperonin 10 Kd subunit LFERR_RS03455 PF12146 Putative lysophospholipase LFERR_RS03460 PF02683 LFERR_RS03460 LFERR_RS03460 PF11412 Disulphide bond corrector protein DsbC LFERR_RS03460 PF13899 Thioredoxin-like LFERR_RS03465 PF10276 Zinc-finger domain LFERR_RS03470 PF01063 Aminotransferase class IV LFERR_RS03475 PF03710 Glutamate-ammonia ligase adenylyltransferase LFERR_RS03475 PF08335 GlnD PII-uridylyltransferase LFERR_RS03480 PF13116 LFERR_RS03480 LFERR_RS03480 PF13502 LFERR_RS03480 LFERR_RS03485 PF00795 Carbon-nitrogen hydrolase LFERR_RS03490 PF00005 ABC transporter LFERR_RS03490 PF06472 LFERR_RS03490 LFERR_RS03495 PF00578 AhpC/TSA family LFERR_RS03505 PF01252 LFERR_RS03505 LFERR_RS03510 PF00133 tRNA synthetases class I (I, L, M and V) LFERR_RS03510 PF06827 Zinc finger found in FPG and IleRS LFERR_RS03510 PF08264 Anticodon-binding domain of tRNA LFERR_RS03515 PF01687 Riboflavin kinase LFERR_RS03515 PF06574 FAD synthetase LFERR_RS03520 PF09969 LFERR_RS03520 LFERR_RS03525 PF03023 LFERR_RS03525 LFERR_RS03535 PF03755 LFERR_RS03535 LFERR_RS03535 PF08340 LFERR_RS03535 LFERR_RS03540 PF00625 Guanylate kinase LFERR_RS03545 PF01192 RNA polymerase Rpb6 LFERR_RS03550 PF02824 TGS domain LFERR_RS03550 PF04607 Region found in RelA / SpoT proteins LFERR_RS03550 PF13291 ACT domain LFERR_RS03550 PF13328 HD domain LFERR_RS03555 PF01042 Endoribonuclease L-PSP LFERR_RS03560 PF08984 Domain of unknown function (DUF1858) LFERR_RS03565 PF00270 DEAD/DEAH box helicase LFERR_RS03565 PF00271 Helicase conserved C-terminal domain LFERR_RS03565 PF17191 LFERR_RS03565 LFERR_RS03570 PF03734 L,D-transpeptidase catalytic domain LFERR_RS03575 PF01593 Flavin containing amine oxidoreductase LFERR_RS03580 PF01594 LFERR_RS03580 LFERR_RS03585 PF01875 Memo-like protein LFERR_RS03590 PF01871 AMMECR1 LFERR_RS03595 PF04055 Radical SAM superfamily LFERR_RS03600 PF02321 Outer membrane efflux protein LFERR_RS03605 PF00425 chorismate binding enzyme LFERR_RS03605 PF04715 Anthranilate synthase component I, N terminal region LFERR_RS03610 PF03706 LFERR_RS03610 LFERR_RS03625 PF10049 LFERR_RS03625 LFERR_RS03630 PF14076 LFERR_RS03630 LFERR_RS03660 PF01699 Sodium/calcium exchanger protein LFERR_RS03670 PF00270 DEAD/DEAH box helicase LFERR_RS03670 PF00271 Helicase conserved C-terminal domain LFERR_RS03670 PF03880 DbpA RNA binding domain LFERR_RS03675 PF00313 'Cold-shock' DNA-binding domain LFERR_RS03680 PF00270 DEAD/DEAH box helicase LFERR_RS03680 PF11331 LFERR_RS03680 LFERR_RS03685 PF01040 UbiA prenyltransferase family LFERR_RS03690 PF04345 Chorismate lyase LFERR_RS03695 PF13649 Methyltransferase domain LFERR_RS03705 PF00919 Uncharacterized protein family UPF0004 LFERR_RS03705 PF01938 TRAM domain LFERR_RS03705 PF04055 Radical SAM superfamily LFERR_RS03710 PF02562 PhoH-like protein LFERR_RS03715 PF02130 Uncharacterized protein family UPF0054 LFERR_RS03720 PF00571 CBS domain LFERR_RS03720 PF03471 Transporter associated domain LFERR_RS03725 PF00795 Carbon-nitrogen hydrolase LFERR_RS03730 PF01523 Putative modulator of DNA gyrase LFERR_RS03735 PF01297 Periplasmic solute binding protein family LFERR_RS03740 PF00005 ABC transporter LFERR_RS03745 PF00950 LFERR_RS03745 LFERR_RS03750 PF00950 LFERR_RS03750 LFERR_RS03765 PF01370 NAD dependent epimerase/dehydratase family LFERR_RS03790 PF04101 Glycosyltransferase family 28 C-terminal domain LFERR_RS03795 PF00534 Glycosyl transferases group 1 LFERR_RS03795 PF13439 Glycosyltransferase Family 4 LFERR_RS03800 PF13439 Glycosyltransferase Family 4 LFERR_RS03800 PF13692 Glycosyl transferases group 1 LFERR_RS03805 PF00005 ABC transporter LFERR_RS03805 PF00664 ABC transporter transmembrane region LFERR_RS03810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFERR_RS03810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFERR_RS03810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFERR_RS03820 PF00300 Histidine phosphatase superfamily (branch 1) LFERR_RS03830 PF13560 Helix-turn-helix domain LFERR_RS03835 PF08241 Methyltransferase domain LFERR_RS03840 PF00330 Aconitase family (aconitate hydratase) LFERR_RS03845 PF00694 Aconitase C-terminal domain LFERR_RS03855 PF01243 Pyridoxamine 5'-phosphate oxidase LFERR_RS03855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LFERR_RS03860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LFERR_RS03865 PF17124 LFERR_RS03865 LFERR_RS03875 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LFERR_RS03875 PF06481 COX Aromatic Rich Motif LFERR_RS03880 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFERR_RS03885 PF00510 Cytochrome c oxidase subunit III LFERR_RS03895 PF01040 UbiA prenyltransferase family LFERR_RS03900 PF07690 Major Facilitator Superfamily LFERR_RS03905 PF02673 LFERR_RS03905 LFERR_RS03910 PF01272 Transcription elongation factor, GreA/GreB, C-term LFERR_RS03910 PF03449 Transcription elongation factor, N-terminal LFERR_RS03915 PF02142 MGS-like domain LFERR_RS03915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFERR_RS03915 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LFERR_RS03920 PF00117 Glutamine amidotransferase class-I LFERR_RS03920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LFERR_RS03930 PF02597 ThiS family LFERR_RS03935 PF05690 Thiazole biosynthesis protein ThiG LFERR_RS03945 PF01225 Mur ligase family, catalytic domain LFERR_RS03945 PF02875 Mur ligase family, glutamate ligase domain LFERR_RS03945 PF08245 Mur ligase middle domain LFERR_RS03950 PF02441 Flavoprotein LFERR_RS03955 PF00005 ABC transporter LFERR_RS03960 PF02405 LFERR_RS03960 LFERR_RS03965 PF03168 Late embryogenesis abundant protein LFERR_RS03970 PF03372 Endonuclease/Exonuclease/phosphatase family LFERR_RS03980 PF00899 ThiF family LFERR_RS03985 PF07143 Hydroxyneurosporene synthase (CrtC) LFERR_RS03985 PF17186 LFERR_RS03985 LFERR_RS03990 PF02687 LFERR_RS03990 LFERR_RS03990 PF12704 MacB-like periplasmic core domain LFERR_RS03995 PF00005 ABC transporter LFERR_RS04005 PF00085 Thioredoxin LFERR_RS04010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFERR_RS04010 PF07497 Rho termination factor, RNA-binding domain LFERR_RS04010 PF07498 Rho termination factor, N-terminal domain LFERR_RS04015 PF01197 Ribosomal protein L31 LFERR_RS04020 PF00390 Malic enzyme, N-terminal domain LFERR_RS04020 PF03949 Malic enzyme, NAD binding domain LFERR_RS04025 PF01594 LFERR_RS04025 LFERR_RS04030 PF00920 Dehydratase family LFERR_RS04035 PF01936 NYN domain LFERR_RS04040 PF00583 Acetyltransferase (GNAT) family LFERR_RS04040 PF00696 Amino acid kinase family LFERR_RS04045 PF01722 BolA-like protein LFERR_RS04050 PF03795 YCII-related domain LFERR_RS04055 PF04279 LFERR_RS04055 LFERR_RS04060 PF05673 Protein of unknown function (DUF815) LFERR_RS04065 PF00459 Inositol monophosphatase family LFERR_RS04070 PF00588 SpoU rRNA Methylase family LFERR_RS04075 PF00132 Bacterial transferase hexapeptide (six repeats) LFERR_RS04075 PF06426 Serine acetyltransferase, N-terminal LFERR_RS04080 PF02082 Transcriptional regulator LFERR_RS04085 PF00266 Aminotransferase class-V LFERR_RS04090 PF01592 NifU-like N terminal domain LFERR_RS04095 PF01521 Iron-sulphur cluster biosynthesis LFERR_RS04100 PF07743 HSCB C-terminal oligomerisation domain LFERR_RS04105 PF00012 Hsp70 protein LFERR_RS04110 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS04115 PF04384 Iron-sulphur cluster assembly LFERR_RS04120 PF03054 tRNA methyl transferase LFERR_RS04125 PF01734 Patatin-like phospholipase LFERR_RS04135 PF00271 Helicase conserved C-terminal domain LFERR_RS04135 PF04851 Type III restriction enzyme, res subunit LFERR_RS04135 PF08463 LFERR_RS04135 LFERR_RS04140 PF02384 N-6 DNA Methylase LFERR_RS04140 PF12161 HsdM N-terminal domain LFERR_RS04145 PF02661 Fic/DOC family LFERR_RS04145 PF13310 LFERR_RS04145 LFERR_RS04150 PF01420 Type I restriction modification DNA specificity domain LFERR_RS04155 PF13289 LFERR_RS04155 LFERR_RS04165 PF13683 LFERR_RS04165 LFERR_RS04170 PF02634 FdhD/NarQ family LFERR_RS04180 PF00384 Molybdopterin oxidoreductase LFERR_RS04180 PF01568 Molydopterin dinucleotide binding domain LFERR_RS04185 PF00158 Sigma-54 interaction domain LFERR_RS04185 PF02954 Bacterial regulatory protein, Fis family LFERR_RS04195 PF04828 Glutathione-dependent formaldehyde-activating enzyme LFERR_RS04200 PF00107 Zinc-binding dehydrogenase LFERR_RS04200 PF08240 Alcohol dehydrogenase GroES-like domain LFERR_RS04205 PF00756 Putative esterase LFERR_RS04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS04210 PF03466 LysR substrate binding domain LFERR_RS04215 PF00072 Response regulator receiver domain LFERR_RS04215 PF00158 Sigma-54 interaction domain LFERR_RS04215 PF02954 Bacterial regulatory protein, Fis family LFERR_RS04220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFERR_RS04220 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFERR_RS04225 PF00374 Nickel-dependent hydrogenase LFERR_RS04240 PF01750 Hydrogenase maturation protease LFERR_RS04265 PF00355 Rieske [2Fe-2S] domain LFERR_RS04265 PF01106 NifU-like domain LFERR_RS04270 PF01436 NHL repeat LFERR_RS04275 PF00708 Acylphosphatase LFERR_RS04275 PF01300 Telomere recombination LFERR_RS04275 PF07503 HypF finger LFERR_RS04280 PF01455 HupF/HypC family LFERR_RS04285 PF13580 SIS domain LFERR_RS04290 PF01924 Hydrogenase formation hypA family LFERR_RS04295 PF00586 AIR synthase related protein, N-terminal domain LFERR_RS04295 PF02769 AIR synthase related protein, C-terminal domain LFERR_RS04300 PF01155 Hydrogenase expression/synthesis hypA family LFERR_RS04305 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFERR_RS04310 PF13520 Amino acid permease LFERR_RS04315 PF01266 FAD dependent oxidoreductase LFERR_RS04320 PF01152 Bacterial-like globin LFERR_RS04325 PF00291 Pyridoxal-phosphate dependent enzyme LFERR_RS04325 PF00585 C-terminal regulatory domain of Threonine dehydratase LFERR_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS04335 PF00561 alpha/beta hydrolase fold LFERR_RS04345 PF13444 Acetyltransferase (GNAT) domain LFERR_RS04350 PF01553 Acyltransferase LFERR_RS04355 PF01208 Uroporphyrinogen decarboxylase (URO-D) LFERR_RS04360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS04360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFERR_RS04365 PF00310 Glutamine amidotransferases class-II LFERR_RS04365 PF01493 GXGXG motif LFERR_RS04365 PF01645 Conserved region in glutamate synthase LFERR_RS04365 PF04898 Glutamate synthase central domain LFERR_RS04370 PF01966 HD domain LFERR_RS04370 PF13286 Phosphohydrolase-associated domain LFERR_RS04375 PF02511 Thymidylate synthase complementing protein LFERR_RS04380 PF01761 3-dehydroquinate synthase LFERR_RS04385 PF01202 Shikimate kinase LFERR_RS04390 PF00263 LFERR_RS04390 LFERR_RS04390 PF03958 Bacterial type II/III secretion system short domain LFERR_RS04395 PF04351 Pilus assembly protein, PilP LFERR_RS04400 PF04350 Pilus assembly protein, PilO LFERR_RS04405 PF05137 LFERR_RS04405 LFERR_RS04415 PF14437 LFERR_RS04415 LFERR_RS04420 PF01894 Uncharacterised protein family UPF0047 LFERR_RS04430 PF00488 MutS domain V LFERR_RS04435 PF00205 Thiamine pyrophosphate enzyme, central domain LFERR_RS04435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFERR_RS04435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFERR_RS04440 PF10369 Small subunit of acetolactate synthase LFERR_RS04440 PF13710 ACT domain LFERR_RS04445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LFERR_RS04445 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain LFERR_RS04450 PF02666 LFERR_RS04450 LFERR_RS04455 PF01066 CDP-alcohol phosphatidyltransferase LFERR_RS04460 PF00224 Pyruvate kinase, barrel domain LFERR_RS04465 PF00582 Universal stress protein family LFERR_RS04470 PF14489 QueF-like protein LFERR_RS04475 PF02463 RecF/RecN/SMC N terminal domain LFERR_RS04480 PF11563 Protoglobin LFERR_RS04485 PF12710 haloacid dehalogenase-like hydrolase LFERR_RS04490 PF00533 BRCA1 C Terminus (BRCT) domain LFERR_RS04490 PF01653 NAD-dependent DNA ligase adenylation domain LFERR_RS04490 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LFERR_RS04490 PF03120 NAD-dependent DNA ligase OB-fold domain LFERR_RS04490 PF12826 Helix-hairpin-helix motif LFERR_RS04490 PF14520 Helix-hairpin-helix domain LFERR_RS04495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFERR_RS04500 PF08241 Methyltransferase domain LFERR_RS04505 PF01863 Protein of unknown function DUF45 LFERR_RS04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS04510 PF03466 LysR substrate binding domain LFERR_RS04515 PF00593 TonB dependent receptor LFERR_RS04515 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS04520 PF01925 LFERR_RS04520 LFERR_RS04525 PF01618 LFERR_RS04525 LFERR_RS04530 PF02472 Biopolymer transport protein ExbD/TolR LFERR_RS04535 PF03544 Gram-negative bacterial TonB protein C-terminal LFERR_RS04540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFERR_RS04545 PF01979 Amidohydrolase family LFERR_RS04550 PF00962 Adenosine/AMP deaminase LFERR_RS04555 PF06516 LFERR_RS04555 LFERR_RS04560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LFERR_RS04560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LFERR_RS04565 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS04565 PF01799 [2Fe-2S] binding domain LFERR_RS04570 PF00941 FAD binding domain in molybdopterin dehydrogenase LFERR_RS04570 PF03450 CO dehydrogenase flavoprotein C-terminal domain LFERR_RS04575 PF04115 Ureidoglycolate hydrolase LFERR_RS04580 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) LFERR_RS04585 PF02625 XdhC and CoxI family LFERR_RS04585 PF13478 XdhC Rossmann domain LFERR_RS04590 PF13318 LFERR_RS04590 LFERR_RS04595 PF01425 Amidase LFERR_RS04600 PF11533 Protein of unknown function (DUF3225) LFERR_RS04610 PF01019 Gamma-glutamyltranspeptidase LFERR_RS04615 PF01243 Pyridoxamine 5'-phosphate oxidase LFERR_RS04620 PF01522 Polysaccharide deacetylase LFERR_RS04625 PF01494 FAD binding domain LFERR_RS04635 PF01553 Acyltransferase LFERR_RS04640 PF00535 Glycosyl transferase family 2 LFERR_RS04645 PF00999 Sodium/hydrogen exchanger family LFERR_RS04650 PF00106 short chain dehydrogenase LFERR_RS04660 PF13723 LFERR_RS04660 LFERR_RS04665 PF00109 Beta-ketoacyl synthase, N-terminal domain LFERR_RS04665 PF02801 Beta-ketoacyl synthase, C-terminal domain LFERR_RS04670 PF00550 Phosphopantetheine attachment site LFERR_RS04675 PF03176 MMPL family LFERR_RS04685 PF03279 LFERR_RS04685 LFERR_RS04695 PF00501 AMP-binding enzyme LFERR_RS04695 PF13193 AMP-binding enzyme C-terminal domain LFERR_RS04720 PF03321 GH3 auxin-responsive promoter LFERR_RS04725 PF01804 Penicillin amidase LFERR_RS04730 PF00941 FAD binding domain in molybdopterin dehydrogenase LFERR_RS04730 PF03450 CO dehydrogenase flavoprotein C-terminal domain LFERR_RS04735 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LFERR_RS04735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LFERR_RS04740 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS04740 PF01799 [2Fe-2S] binding domain LFERR_RS04750 PF07690 Major Facilitator Superfamily LFERR_RS04755 PF00654 Voltage gated chloride channel LFERR_RS04760 PF00654 Voltage gated chloride channel LFERR_RS04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS04765 PF03466 LysR substrate binding domain LFERR_RS04770 PF00122 E1-E2 ATPase LFERR_RS04770 PF00690 Cation transporter/ATPase, N-terminus LFERR_RS04770 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS04775 PF00149 Calcineurin-like phosphoesterase LFERR_RS04790 PF02384 N-6 DNA Methylase LFERR_RS04790 PF12161 HsdM N-terminal domain LFERR_RS04795 PF13271 LFERR_RS04795 LFERR_RS04795 PF13749 ATP-dependent DNA helicase recG C-terminal LFERR_RS04800 PF13310 LFERR_RS04800 LFERR_RS04805 PF01420 Type I restriction modification DNA specificity domain LFERR_RS04815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFERR_RS04815 PF04851 Type III restriction enzyme, res subunit LFERR_RS04820 PF01863 Protein of unknown function DUF45 LFERR_RS04830 PF00271 Helicase conserved C-terminal domain LFERR_RS04830 PF02151 UvrB/uvrC motif LFERR_RS04830 PF04851 Type III restriction enzyme, res subunit LFERR_RS04830 PF12344 Ultra-violet resistance protein B LFERR_RS04835 PF00107 Zinc-binding dehydrogenase LFERR_RS04835 PF08240 Alcohol dehydrogenase GroES-like domain LFERR_RS04840 PF00117 Glutamine amidotransferase class-I LFERR_RS04840 PF06418 CTP synthase N-terminus LFERR_RS04845 PF00793 DAHP synthetase I family LFERR_RS04850 PF00113 Enolase, C-terminal TIM barrel domain LFERR_RS04850 PF03952 Enolase, N-terminal domain LFERR_RS04855 PF04977 Septum formation initiator LFERR_RS04860 PF01132 Elongation factor P (EF-P) OB domain LFERR_RS04860 PF08207 Elongation factor P (EF-P) KOW-like domain LFERR_RS04860 PF09285 Elongation factor P, C-terminal LFERR_RS04865 PF06155 Protein of unknown function (DUF971) LFERR_RS04870 PF01541 GIY-YIG catalytic domain LFERR_RS04870 PF02151 UvrB/uvrC motif LFERR_RS04870 PF08459 UvrC Helix-hairpin-helix N-terminal LFERR_RS04870 PF12826 Helix-hairpin-helix motif LFERR_RS04875 PF01066 CDP-alcohol phosphatidyltransferase LFERR_RS04890 PF00027 Cyclic nucleotide-binding domain LFERR_RS04890 PF13545 Crp-like helix-turn-helix domain LFERR_RS04895 PF04343 LFERR_RS04895 LFERR_RS04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS04900 PF14721 Apoptosis-inducing factor, mitochondrion-associated, C-term LFERR_RS04905 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS04905 PF00175 Oxidoreductase NAD-binding domain LFERR_RS04905 PF00970 Oxidoreductase FAD-binding domain LFERR_RS04910 PF00042 Globin LFERR_RS04915 PF00529 HlyD family secretion protein LFERR_RS04915 PF16576 LFERR_RS04915 LFERR_RS04920 PF02321 Outer membrane efflux protein LFERR_RS04925 PF07690 Major Facilitator Superfamily LFERR_RS04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS04930 PF03466 LysR substrate binding domain LFERR_RS04950 PF08388 LFERR_RS04950 LFERR_RS04955 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFERR_RS04960 PF06769 Plasmid encoded toxin Txe LFERR_RS04965 PF00011 Hsp20/alpha crystallin family LFERR_RS04970 PF00004 ATPase family associated with various cellular activities (AAA) LFERR_RS04970 PF02190 ATP-dependent protease La (LON) domain LFERR_RS04970 PF05362 Lon protease (S16) C-terminal proteolytic domain LFERR_RS04985 PF00583 Acetyltransferase (GNAT) family LFERR_RS04995 PF00583 Acetyltransferase (GNAT) family LFERR_RS05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS05005 PF03466 LysR substrate binding domain LFERR_RS05015 PF12973 ChrR Cupin-like domain LFERR_RS05020 PF01593 Flavin containing amine oxidoreductase LFERR_RS05020 PF13450 NAD(P)-binding Rossmann-like domain LFERR_RS05040 PF01906 Putative heavy-metal-binding LFERR_RS05045 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFERR_RS05050 PF05016 Plasmid stabilisation system protein LFERR_RS05060 PF10672 S-adenosylmethionine-dependent methyltransferase LFERR_RS05065 PF01008 Initiation factor 2 subunit family LFERR_RS05070 PF00521 DNA gyrase/topoisomerase IV, subunit A LFERR_RS05070 PF03989 DNA gyrase C-terminal domain, beta-propeller LFERR_RS05075 PF00266 Aminotransferase class-V LFERR_RS05080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFERR_RS05080 PF01842 ACT domain LFERR_RS05080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFERR_RS05085 PF00800 Prephenate dehydratase LFERR_RS05085 PF01817 Chorismate mutase type II LFERR_RS05085 PF01842 ACT domain LFERR_RS05090 PF00155 Aminotransferase class I and II LFERR_RS05095 PF00793 DAHP synthetase I family LFERR_RS05100 PF02153 Prephenate dehydrogenase LFERR_RS05105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFERR_RS05110 PF02224 Cytidylate kinase LFERR_RS05115 PF00575 S1 RNA binding domain LFERR_RS05120 PF00216 Bacterial DNA-binding protein LFERR_RS05125 PF13174 Tetratricopeptide repeat LFERR_RS05125 PF13432 Tetratricopeptide repeat LFERR_RS05130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFERR_RS05135 PF00156 Phosphoribosyl transferase domain LFERR_RS05140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFERR_RS05140 PF05697 Bacterial trigger factor protein (TF) LFERR_RS05140 PF05698 Bacterial trigger factor protein (TF) C-terminus LFERR_RS05145 PF00574 Clp protease LFERR_RS05150 PF06689 ClpX C4-type zinc finger LFERR_RS05150 PF07724 AAA domain (Cdc48 subfamily) LFERR_RS05150 PF10431 C-terminal, D2-small domain, of ClpB protein LFERR_RS05155 PF00004 ATPase family associated with various cellular activities (AAA) LFERR_RS05155 PF02190 ATP-dependent protease La (LON) domain LFERR_RS05155 PF05362 Lon protease (S16) C-terminal proteolytic domain LFERR_RS05160 PF00216 Bacterial DNA-binding protein LFERR_RS05175 PF13624 SurA N-terminal domain LFERR_RS05180 PF01569 PAP2 superfamily LFERR_RS05185 PF14235 LFERR_RS05185 LFERR_RS05190 PF01566 LFERR_RS05190 LFERR_RS05200 PF07690 Major Facilitator Superfamily LFERR_RS05205 PF04356 Protein of unknown function (DUF489) LFERR_RS05210 PF01842 ACT domain LFERR_RS05210 PF01909 Nucleotidyltransferase domain LFERR_RS05210 PF01966 HD domain LFERR_RS05210 PF08335 GlnD PII-uridylyltransferase LFERR_RS05215 PF00557 Metallopeptidase family M24 LFERR_RS05220 PF03749 Sugar fermentation stimulation protein LFERR_RS05225 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFERR_RS05230 PF00586 AIR synthase related protein, N-terminal domain LFERR_RS05230 PF02769 AIR synthase related protein, C-terminal domain LFERR_RS05235 PF04608 Phosphatidylglycerophosphatase A LFERR_RS05240 PF02464 Competence-damaged protein LFERR_RS05245 PF00154 recA bacterial DNA recombination protein LFERR_RS05250 PF02631 RecX family LFERR_RS05255 PF01411 tRNA synthetases class II (A) LFERR_RS05255 PF02272 DHHA1 domain LFERR_RS05255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFERR_RS05265 PF01750 Hydrogenase maturation protease LFERR_RS05270 PF00374 Nickel-dependent hydrogenase LFERR_RS05275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFERR_RS05280 PF00175 Oxidoreductase NAD-binding domain LFERR_RS05280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LFERR_RS05285 PF17179 LFERR_RS05285 LFERR_RS05290 PF01464 Transglycosylase SLT domain LFERR_RS05295 PF00176 SNF2 family N-terminal domain LFERR_RS05295 PF00271 Helicase conserved C-terminal domain LFERR_RS05300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFERR_RS05300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFERR_RS05300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFERR_RS05300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFERR_RS05310 PF00005 ABC transporter LFERR_RS05310 PF12848 ABC transporter LFERR_RS05315 PF01964 ThiC family LFERR_RS05315 PF13667 ThiC-associated domain LFERR_RS05320 PF05425 LFERR_RS05320 LFERR_RS05325 PF00732 GMC oxidoreductase LFERR_RS05325 PF05199 GMC oxidoreductase LFERR_RS05330 PF00171 Aldehyde dehydrogenase family LFERR_RS05340 PF02322 LFERR_RS05340 LFERR_RS05345 PF01654 LFERR_RS05345 LFERR_RS05355 PF00158 Sigma-54 interaction domain LFERR_RS05360 PF02230 Phospholipase/Carboxylesterase LFERR_RS05365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFERR_RS05365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS05370 PF04349 Periplasmic glucan biosynthesis protein, MdoG LFERR_RS05380 PF00535 Glycosyl transferase family 2 LFERR_RS05385 PF13460 NADH(P)-binding LFERR_RS05390 PF04241 LFERR_RS05390 LFERR_RS05410 PF14341 LFERR_RS05410 LFERR_RS05415 PF16074 LFERR_RS05415 LFERR_RS05420 PF13633 Prokaryotic N-terminal methylation site LFERR_RS05425 PF07963 Prokaryotic N-terminal methylation motif LFERR_RS05425 PF12019 Type II transport protein GspH LFERR_RS05430 PF00482 Type II secretion system (T2SS), protein F LFERR_RS05435 PF01343 Peptidase family S49 LFERR_RS05435 PF08496 LFERR_RS05435 LFERR_RS05440 PF02597 ThiS family LFERR_RS05445 PF02391 MoaE protein LFERR_RS05450 PF04461 Protein of unknown function (DUF520) LFERR_RS05455 PF03259 Roadblock/LC7 domain LFERR_RS05460 PF01571 Aminomethyltransferase folate-binding domain LFERR_RS05460 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFERR_RS05465 PF01597 Glycine cleavage H-protein LFERR_RS05470 PF02347 Glycine cleavage system P-protein LFERR_RS05475 PF02347 Glycine cleavage system P-protein LFERR_RS05480 PF00005 ABC transporter LFERR_RS05480 PF00664 ABC transporter transmembrane region LFERR_RS05485 PF00037 4Fe-4S binding domain LFERR_RS05485 PF11953 Domain of unknown function (DUF3470) LFERR_RS05490 PF00578 AhpC/TSA family LFERR_RS05490 PF10417 C-terminal domain of 1-Cys peroxiredoxin LFERR_RS05500 PF02811 PHP domain LFERR_RS05505 PF01594 LFERR_RS05505 LFERR_RS05520 PF00588 SpoU rRNA Methylase family LFERR_RS05520 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFERR_RS05525 PF01026 TatD related DNase LFERR_RS05530 PF12706 Beta-lactamase superfamily domain LFERR_RS05540 PF08495 LFERR_RS05540 LFERR_RS05540 PF10442 LFERR_RS05540 LFERR_RS05545 PF00005 ABC transporter LFERR_RS05545 PF00664 ABC transporter transmembrane region LFERR_RS05550 PF00005 ABC transporter LFERR_RS05550 PF00664 ABC transporter transmembrane region LFERR_RS05560 PF01571 Aminomethyltransferase folate-binding domain LFERR_RS05570 PF00890 FAD binding domain LFERR_RS05570 PF02910 Fumarate reductase flavoprotein C-term LFERR_RS05575 PF04542 Sigma-70 region 2 LFERR_RS05575 PF08281 Sigma-70, region 4 LFERR_RS05585 PF13180 PDZ domain LFERR_RS05585 PF13365 Trypsin-like peptidase domain LFERR_RS05590 PF00009 Elongation factor Tu GTP binding domain LFERR_RS05590 PF00679 Elongation factor G C-terminus LFERR_RS05590 PF03144 Elongation factor Tu domain 2 LFERR_RS05590 PF06421 GTP-binding protein LepA C-terminus LFERR_RS05595 PF00717 Peptidase S24-like LFERR_RS05595 PF10502 Signal peptidase, peptidase S26 LFERR_RS05600 PF16137 LFERR_RS05600 LFERR_RS05605 PF00035 Double-stranded RNA binding motif LFERR_RS05605 PF14622 Ribonuclease-III-like LFERR_RS05610 PF01926 50S ribosome-binding GTPase LFERR_RS05610 PF07650 KH domain LFERR_RS05615 PF02565 Recombination protein O C terminal LFERR_RS05615 PF11967 Recombination protein O N terminal LFERR_RS05620 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LFERR_RS05625 PF01648 4'-phosphopantetheinyl transferase superfamily LFERR_RS05630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFERR_RS05645 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFERR_RS05645 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFERR_RS05650 PF00294 pfkB family carbohydrate kinase LFERR_RS05655 PF01171 PP-loop family LFERR_RS05660 PF01430 Hsp33 protein LFERR_RS05665 PF11663 LFERR_RS05665 LFERR_RS05670 PF15937 LFERR_RS05670 LFERR_RS05675 PF12161 HsdM N-terminal domain LFERR_RS05680 PF13673 Acetyltransferase (GNAT) domain LFERR_RS05685 PF08681 Protein of unknown function (DUF1778) LFERR_RS05700 PF12850 Calcineurin-like phosphoesterase superfamily domain LFERR_RS05705 PF11154 LFERR_RS05705 LFERR_RS05710 PF00534 Glycosyl transferases group 1 LFERR_RS05710 PF13439 Glycosyltransferase Family 4 LFERR_RS05715 PF00534 Glycosyl transferases group 1 LFERR_RS05715 PF13439 Glycosyltransferase Family 4 LFERR_RS05725 PF00034 Cytochrome c LFERR_RS05730 PF01545 Cation efflux family LFERR_RS05735 PF13411 MerR HTH family regulatory protein LFERR_RS05740 PF00270 DEAD/DEAH box helicase LFERR_RS05740 PF00271 Helicase conserved C-terminal domain LFERR_RS05745 PF00072 Response regulator receiver domain LFERR_RS05745 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS05750 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS05750 PF11808 LFERR_RS05750 LFERR_RS05750 PF13188 PAS domain LFERR_RS05755 PF12849 PBP superfamily domain LFERR_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component LFERR_RS05765 PF00528 Binding-protein-dependent transport system inner membrane component LFERR_RS05770 PF00005 ABC transporter LFERR_RS05775 PF01895 PhoU domain LFERR_RS05780 PF02541 Ppx/GppA phosphatase family LFERR_RS05785 PF09335 LFERR_RS05785 LFERR_RS05790 PF00318 Ribosomal protein S2 LFERR_RS05795 PF00889 Elongation factor TS LFERR_RS05800 PF00696 Amino acid kinase family LFERR_RS05805 PF01765 Ribosome recycling factor LFERR_RS05810 PF01255 Putative undecaprenyl diphosphate synthase LFERR_RS05815 PF01148 Cytidylyltransferase family LFERR_RS05820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LFERR_RS05820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal LFERR_RS05820 PF13288 DXP reductoisomerase C-terminal domain LFERR_RS05825 PF02163 Peptidase family M50 LFERR_RS05825 PF13180 PDZ domain LFERR_RS05830 PF01103 Surface antigen LFERR_RS05830 PF07244 Surface antigen variable number repeat LFERR_RS05835 PF03938 Outer membrane protein (OmpH-like) LFERR_RS05840 PF00132 Bacterial transferase hexapeptide (six repeats) LFERR_RS05840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LFERR_RS05845 PF07977 FabA-like domain LFERR_RS05850 PF00132 Bacterial transferase hexapeptide (six repeats) LFERR_RS05850 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LFERR_RS05855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFERR_RS05860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFERR_RS05865 PF02684 LFERR_RS05865 LFERR_RS05870 PF01351 Ribonuclease HII LFERR_RS05875 PF01336 OB-fold nucleic acid binding domain LFERR_RS05875 PF02811 PHP domain LFERR_RS05875 PF07733 Bacterial DNA polymerase III alpha subunit LFERR_RS05875 PF14579 Helix-hairpin-helix motif LFERR_RS05880 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LFERR_RS05885 PF01171 PP-loop family LFERR_RS05885 PF09179 TilS substrate binding domain LFERR_RS05885 PF11734 TilS substrate C-terminal domain LFERR_RS05890 PF01979 Amidohydrolase family LFERR_RS05895 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFERR_RS05900 PF13419 Haloacid dehalogenase-like hydrolase LFERR_RS05905 PF01475 Ferric uptake regulator family LFERR_RS05910 PF00578 AhpC/TSA family LFERR_RS05915 PF02562 PhoH-like protein LFERR_RS05915 PF13638 PIN domain LFERR_RS05920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFERR_RS05920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFERR_RS05930 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFERR_RS05940 PF13417 Glutathione S-transferase, N-terminal domain LFERR_RS05955 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase LFERR_RS05960 PF01494 FAD binding domain LFERR_RS05965 PF00766 Electron transfer flavoprotein FAD-binding domain LFERR_RS05965 PF01012 Electron transfer flavoprotein domain LFERR_RS05970 PF01012 Electron transfer flavoprotein domain LFERR_RS05975 PF01152 Bacterial-like globin LFERR_RS05985 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS05990 PF01618 LFERR_RS05990 LFERR_RS05995 PF02472 Biopolymer transport protein ExbD/TolR LFERR_RS06000 PF03544 Gram-negative bacterial TonB protein C-terminal LFERR_RS06005 PF01497 Periplasmic binding protein LFERR_RS06010 PF01032 FecCD transport family LFERR_RS06015 PF00005 ABC transporter LFERR_RS06020 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS06035 PF00593 TonB dependent receptor LFERR_RS06040 PF13531 Bacterial extracellular solute-binding protein LFERR_RS06045 PF01497 Periplasmic binding protein LFERR_RS06050 PF01032 FecCD transport family LFERR_RS06055 PF01545 Cation efflux family LFERR_RS06055 PF16916 LFERR_RS06055 LFERR_RS06060 PF03573 outer membrane porin, OprD family LFERR_RS06065 PF13531 Bacterial extracellular solute-binding protein LFERR_RS06070 PF00004 ATPase family associated with various cellular activities (AAA) LFERR_RS06080 PF09723 LFERR_RS06080 LFERR_RS06085 PF00581 Rhodanese-like domain LFERR_RS06085 PF12796 Ankyrin repeats (3 copies) LFERR_RS06085 PF13606 Ankyrin repeat LFERR_RS06090 PF00881 Nitroreductase family LFERR_RS06095 PF03206 LFERR_RS06095 LFERR_RS06100 PF00132 Bacterial transferase hexapeptide (six repeats) LFERR_RS06100 PF06426 Serine acetyltransferase, N-terminal LFERR_RS06105 PF00682 HMGL-like LFERR_RS06110 PF00266 Aminotransferase class-V LFERR_RS06115 PF01106 NifU-like domain LFERR_RS06115 PF01592 NifU-like N terminal domain LFERR_RS06115 PF04324 BFD-like [2Fe-2S] binding domain LFERR_RS06120 PF01521 Iron-sulphur cluster biosynthesis LFERR_RS06130 PF04891 LFERR_RS06130 LFERR_RS06135 PF14697 4Fe-4S dicluster domain LFERR_RS06140 PF05082 Rop-like LFERR_RS06145 PF03270 Protein of unknown function, DUF269 LFERR_RS06150 PF02579 Dinitrogenase iron-molybdenum cofactor LFERR_RS06155 PF00148 Nitrogenase component 1 type Oxidoreductase LFERR_RS06160 PF00148 Nitrogenase component 1 type Oxidoreductase LFERR_RS06165 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS06170 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS06175 PF00148 Nitrogenase component 1 type Oxidoreductase LFERR_RS06175 PF11844 Domain of unknown function (DUF3364) LFERR_RS06180 PF00148 Nitrogenase component 1 type Oxidoreductase LFERR_RS06185 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LFERR_RS06195 PF07357 LFERR_RS06195 LFERR_RS06200 PF03747 ADP-ribosylglycohydrolase LFERR_RS06200 PF03960 ArsC family LFERR_RS06205 PF00158 Sigma-54 interaction domain LFERR_RS06205 PF01590 GAF domain LFERR_RS06205 PF02954 Bacterial regulatory protein, Fis family LFERR_RS06210 PF02579 Dinitrogenase iron-molybdenum cofactor LFERR_RS06210 PF04055 Radical SAM superfamily LFERR_RS06215 PF00037 4Fe-4S binding domain LFERR_RS06220 PF01521 Iron-sulphur cluster biosynthesis LFERR_RS06235 PF05484 LRV protein FeS4 cluster LFERR_RS06240 PF04319 LFERR_RS06240 LFERR_RS06245 PF04319 LFERR_RS06245 LFERR_RS06250 PF00266 Aminotransferase class-V LFERR_RS06255 PF06988 NifT/FixU protein LFERR_RS06265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFERR_RS06270 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS06280 PF13289 LFERR_RS06280 LFERR_RS06285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFERR_RS06285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFERR_RS06290 PF03459 TOBE domain LFERR_RS06295 PF00171 Aldehyde dehydrogenase family LFERR_RS06300 PF01152 Bacterial-like globin LFERR_RS06305 PF07690 Major Facilitator Superfamily LFERR_RS06310 PF00924 Mechanosensitive ion channel LFERR_RS06315 PF00294 pfkB family carbohydrate kinase LFERR_RS06320 PF00534 Glycosyl transferases group 1 LFERR_RS06320 PF00862 Sucrose synthase LFERR_RS06320 PF05116 Sucrose-6F-phosphate phosphohydrolase LFERR_RS06325 PF00534 Glycosyl transferases group 1 LFERR_RS06325 PF00862 Sucrose synthase LFERR_RS06330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFERR_RS06330 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFERR_RS06335 PF02656 LFERR_RS06335 LFERR_RS06345 PF00589 Phage integrase family LFERR_RS06370 PF07120 LFERR_RS06370 LFERR_RS06375 PF01695 IstB-like ATP binding protein LFERR_RS06385 PF02086 D12 class N6 adenine-specific DNA methyltransferase LFERR_RS06390 PF00436 Single-strand binding protein family LFERR_RS06405 PF10544 LFERR_RS06405 LFERR_RS06415 PF04326 Divergent AAA domain LFERR_RS06425 PF02384 N-6 DNA Methylase LFERR_RS06430 PF01850 PIN domain LFERR_RS06440 PF00216 Bacterial DNA-binding protein LFERR_RS06445 PF00216 Bacterial DNA-binding protein LFERR_RS06460 PF04221 RelB antitoxin LFERR_RS06470 PF01553 Acyltransferase LFERR_RS06475 PF13338 LFERR_RS06475 LFERR_RS06480 PF08843 Nucleotidyl transferase of unknown function (DUF1814) LFERR_RS06485 PF08401 LFERR_RS06485 LFERR_RS06485 PF12083 LFERR_RS06485 LFERR_RS06520 PF14384 LFERR_RS06520 LFERR_RS06525 PF04365 Protein of unknown function (DUF497) LFERR_RS06545 PF11843 LFERR_RS06545 LFERR_RS06565 PF03050 LFERR_RS06565 LFERR_RS06565 PF13005 LFERR_RS06565 LFERR_RS06565 PF13007 LFERR_RS06565 LFERR_RS06565 PF13817 LFERR_RS06565 LFERR_RS06570 PF05717 LFERR_RS06570 LFERR_RS06585 PF01381 Helix-turn-helix LFERR_RS06600 PF00437 Type II/IV secretion system protein LFERR_RS06615 PF04956 LFERR_RS06615 LFERR_RS06620 PF05101 LFERR_RS06620 LFERR_RS06625 PF03135 LFERR_RS06625 LFERR_RS06645 PF04610 LFERR_RS06645 LFERR_RS06655 PF06146 LFERR_RS06655 LFERR_RS06660 PF13180 PDZ domain LFERR_RS06660 PF13365 Trypsin-like peptidase domain LFERR_RS06665 PF00011 Hsp20/alpha crystallin family LFERR_RS06670 PF00665 Integrase core domain LFERR_RS06675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFERR_RS06675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFERR_RS06680 PF00384 Molybdopterin oxidoreductase LFERR_RS06680 PF01568 Molydopterin dinucleotide binding domain LFERR_RS06690 PF02634 FdhD/NarQ family LFERR_RS06695 PF13358 DDE superfamily endonuclease LFERR_RS06695 PF13592 LFERR_RS06695 LFERR_RS06700 PF00111 2Fe-2S iron-sulfur cluster binding domain LFERR_RS06700 PF00175 Oxidoreductase NAD-binding domain LFERR_RS06700 PF00970 Oxidoreductase FAD-binding domain LFERR_RS06705 PF03063 Prismane/CO dehydrogenase family LFERR_RS06710 PF00027 Cyclic nucleotide-binding domain LFERR_RS06710 PF13545 Crp-like helix-turn-helix domain LFERR_RS06720 PF10070 LFERR_RS06720 LFERR_RS06725 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LFERR_RS06725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFERR_RS06730 PF02754 LFERR_RS06730 LFERR_RS06730 PF12838 4Fe-4S dicluster domain LFERR_RS06735 PF01565 FAD binding domain LFERR_RS06740 PF01565 FAD binding domain LFERR_RS06740 PF02913 FAD linked oxidases, C-terminal domain LFERR_RS06745 PF07005 Protein of unknown function, DUF1537 LFERR_RS06745 PF17042 LFERR_RS06745 LFERR_RS06750 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LFERR_RS06750 PF09364 XFP N-terminal domain LFERR_RS06755 PF01614 Bacterial transcriptional regulator LFERR_RS06755 PF09339 IclR helix-turn-helix domain LFERR_RS06775 PF01979 Amidohydrolase family LFERR_RS06780 PF00920 Dehydratase family LFERR_RS06785 PF01300 Telomere recombination LFERR_RS06785 PF03481 Putative GTP-binding controlling metal-binding LFERR_RS06795 PF13500 AAA domain LFERR_RS06800 PF01116 Fructose-bisphosphate aldolase class-II LFERR_RS06800 PF07876 Stress responsive A/B Barrel Domain LFERR_RS06805 PF00092 von Willebrand factor type A domain LFERR_RS06810 PF07728 AAA domain (dynein-related subfamily) LFERR_RS06810 PF08406 LFERR_RS06810 LFERR_RS06815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFERR_RS06825 PF00210 Ferritin-like domain LFERR_RS06830 PF00936 BMC domain LFERR_RS06835 PF00936 BMC domain LFERR_RS06840 PF00936 BMC domain LFERR_RS06845 PF03319 Ethanolamine utilisation protein EutN/carboxysome LFERR_RS06850 PF03319 Ethanolamine utilisation protein EutN/carboxysome LFERR_RS06855 PF08936 Carboxysome Shell Carbonic Anhydrase LFERR_RS06860 PF12288 LFERR_RS06860 LFERR_RS06865 PF00101 Ribulose bisphosphate carboxylase, small chain LFERR_RS06870 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LFERR_RS06870 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LFERR_RS06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS06875 PF03466 LysR substrate binding domain LFERR_RS06880 PF09995 LFERR_RS06880 LFERR_RS06885 PF04335 VirB8 protein LFERR_RS06890 PF03524 Conjugal transfer protein LFERR_RS06895 PF03524 Conjugal transfer protein LFERR_RS06900 PF03743 Bacterial conjugation TrbI-like protein LFERR_RS06910 PF01464 Transglycosylase SLT domain LFERR_RS06915 PF02534 Type IV secretory system Conjugative DNA transfer LFERR_RS06950 PF00563 EAL domain LFERR_RS06960 PF00563 EAL domain LFERR_RS06960 PF00990 GGDEF domain LFERR_RS06960 PF11563 Protoglobin LFERR_RS06960 PF13682 Chemoreceptor zinc-binding domain LFERR_RS06975 PF13091 PLD-like domain LFERR_RS06990 PF02195 ParB-like nuclease domain LFERR_RS06995 PF13614 AAA domain LFERR_RS07005 PF16694 LFERR_RS07005 LFERR_RS07010 PF00248 Aldo/keto reductase family LFERR_RS07015 PF00563 EAL domain LFERR_RS07015 PF00990 GGDEF domain LFERR_RS07015 PF08448 PAS fold LFERR_RS07015 PF13682 Chemoreceptor zinc-binding domain LFERR_RS07020 PF10502 Signal peptidase, peptidase S26 LFERR_RS07040 PF00795 Carbon-nitrogen hydrolase LFERR_RS07060 PF01131 DNA topoisomerase LFERR_RS07060 PF01751 Toprim domain LFERR_RS07065 PF00665 Integrase core domain LFERR_RS07065 PF13276 LFERR_RS07065 LFERR_RS07070 PF01527 Transposase LFERR_RS07090 PF00817 impB/mucB/samB family LFERR_RS07090 PF11798 IMS family HHH motif LFERR_RS07090 PF11799 impB/mucB/samB family C-terminal domain LFERR_RS07100 PF13091 PLD-like domain LFERR_RS07115 PF00488 MutS domain V LFERR_RS07115 PF01624 MutS domain I LFERR_RS07115 PF05188 MutS domain II LFERR_RS07115 PF05190 MutS family domain IV LFERR_RS07115 PF05192 MutS domain III LFERR_RS07120 PF04325 Protein of unknown function (DUF465) LFERR_RS07125 PF04461 Protein of unknown function (DUF520) LFERR_RS07130 PF00534 Glycosyl transferases group 1 LFERR_RS07130 PF13439 Glycosyltransferase Family 4 LFERR_RS07135 PF01027 Inhibitor of apoptosis-promoting Bax1 LFERR_RS07140 PF00929 Exonuclease LFERR_RS07140 PF12843 LFERR_RS07140 LFERR_RS07145 PF00596 Class II Aldolase and Adducin N-terminal domain LFERR_RS07150 PF01713 Smr domain LFERR_RS07155 PF01565 FAD binding domain LFERR_RS07155 PF02754 LFERR_RS07155 LFERR_RS07155 PF02913 FAD linked oxidases, C-terminal domain LFERR_RS07155 PF11880 LFERR_RS07155 LFERR_RS07155 PF12447 LFERR_RS07155 LFERR_RS07155 PF13183 4Fe-4S dicluster domain LFERR_RS07160 PF02569 Pantoate-beta-alanine ligase LFERR_RS07165 PF02548 Ketopantoate hydroxymethyltransferase LFERR_RS07170 PF01712 Deoxynucleoside kinase LFERR_RS07175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LFERR_RS07180 PF01743 Poly A polymerase head domain LFERR_RS07185 PF01743 Poly A polymerase head domain LFERR_RS07185 PF12626 Polymerase A arginine-rich C-terminus LFERR_RS07185 PF12627 Probable RNA and SrmB- binding site of polymerase A LFERR_RS07190 PF00535 Glycosyl transferase family 2 LFERR_RS07195 PF00478 IMP dehydrogenase / GMP reductase domain LFERR_RS07195 PF00571 CBS domain LFERR_RS07200 PF00117 Glutamine amidotransferase class-I LFERR_RS07200 PF00958 GMP synthase C terminal domain LFERR_RS07210 PF01850 PIN domain LFERR_RS07215 PF04014 Antidote-toxin recognition MazE LFERR_RS07220 PF13520 Amino acid permease LFERR_RS07225 PF00696 Amino acid kinase family LFERR_RS07225 PF01472 PUA domain LFERR_RS07230 PF00924 Mechanosensitive ion channel LFERR_RS07245 PF01300 Telomere recombination LFERR_RS07255 PF00579 tRNA synthetases class I (W and Y) LFERR_RS07260 PF02616 ScpA/B protein LFERR_RS07265 PF04079 Putative transcriptional regulators (Ypuh-like) LFERR_RS07270 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS07275 PF00849 RNA pseudouridylate synthase LFERR_RS07275 PF01479 S4 domain LFERR_RS07280 PF00730 HhH-GPD superfamily base excision DNA repair protein LFERR_RS07285 PF04226 LFERR_RS07285 LFERR_RS07295 PF07690 Major Facilitator Superfamily LFERR_RS07300 PF03729 LFERR_RS07300 LFERR_RS07305 PF00343 Carbohydrate phosphorylase LFERR_RS07305 PF11897 LFERR_RS07305 LFERR_RS07310 PF00113 Enolase, C-terminal TIM barrel domain LFERR_RS07315 PF00224 Pyruvate kinase, barrel domain LFERR_RS07315 PF02887 Pyruvate kinase, alpha/beta domain LFERR_RS07320 PF01791 DeoC/LacD family aldolase LFERR_RS07325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFERR_RS07325 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS07335 PF00294 pfkB family carbohydrate kinase LFERR_RS07340 PF01515 Phosphate acetyl/butaryl transferase LFERR_RS07345 PF00083 Sugar (and other) transporter LFERR_RS07350 PF00871 Acetokinase family LFERR_RS07365 PF00871 Acetokinase family LFERR_RS07370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFERR_RS07370 PF00364 Biotin-requiring enzyme LFERR_RS07375 PF02779 Transketolase, pyrimidine binding domain LFERR_RS07375 PF02780 Transketolase, C-terminal domain LFERR_RS07380 PF00676 Dehydrogenase E1 component LFERR_RS07385 PF02627 Carboxymuconolactone decarboxylase family LFERR_RS07390 PF01676 Metalloenzyme superfamily LFERR_RS07390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LFERR_RS07395 PF00391 PEP-utilising enzyme, mobile domain LFERR_RS07395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFERR_RS07395 PF02896 PEP-utilising enzyme, TIM barrel domain LFERR_RS07400 PF13469 Sulfotransferase family LFERR_RS07405 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel LFERR_RS07405 PF05036 Sporulation related domain LFERR_RS07410 PF01546 Peptidase family M20/M25/M40 LFERR_RS07410 PF07687 Peptidase dimerisation domain LFERR_RS07415 PF00132 Bacterial transferase hexapeptide (six repeats) LFERR_RS07415 PF14602 Hexapeptide repeat of succinyl-transferase LFERR_RS07415 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LFERR_RS07420 PF00155 Aminotransferase class I and II LFERR_RS07425 PF00892 EamA-like transporter family LFERR_RS07430 PF13419 Haloacid dehalogenase-like hydrolase LFERR_RS07435 PF08241 Methyltransferase domain LFERR_RS07440 PF01979 Amidohydrolase family LFERR_RS07445 PF13406 Transglycosylase SLT domain LFERR_RS07450 PF00877 NlpC/P60 family LFERR_RS07460 PF05494 Toluene tolerance, Ttg2 LFERR_RS07465 PF09411 Lipid A 3-O-deacylase (PagL) LFERR_RS07475 PF00140 Sigma-70 factor, region 1 LFERR_RS07475 PF04539 Sigma-70 region 3 LFERR_RS07475 PF04542 Sigma-70 region 2 LFERR_RS07475 PF04545 Sigma-70, region 4 LFERR_RS07510 PF01695 IstB-like ATP binding protein LFERR_RS07515 PF00665 Integrase core domain LFERR_RS07535 PF00456 Transketolase, thiamine diphosphate binding domain LFERR_RS07535 PF02779 Transketolase, pyrimidine binding domain LFERR_RS07535 PF02780 Transketolase, C-terminal domain LFERR_RS07540 PF00037 4Fe-4S binding domain LFERR_RS07540 PF09313 Domain of unknown function (DUF1971) LFERR_RS07540 PF11953 Domain of unknown function (DUF3470) LFERR_RS07545 PF11160 LFERR_RS07545 LFERR_RS07550 PF03595 Voltage-dependent anion channel LFERR_RS07560 PF00730 HhH-GPD superfamily base excision DNA repair protein LFERR_RS07570 PF00535 Glycosyl transferase family 2 LFERR_RS07585 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS07595 PF00732 GMC oxidoreductase LFERR_RS07595 PF05199 GMC oxidoreductase LFERR_RS07600 PF13561 Enoyl-(Acyl carrier protein) reductase LFERR_RS07605 PF09137 Glucodextranase, domain N LFERR_RS07610 PF01329 Pterin 4 alpha carbinolamine dehydratase LFERR_RS07615 PF00403 Heavy-metal-associated domain LFERR_RS07625 PF14373 LFERR_RS07625 LFERR_RS07630 PF13671 AAA domain LFERR_RS07635 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) LFERR_RS07640 PF00717 Peptidase S24-like LFERR_RS07640 PF01726 LexA DNA binding domain LFERR_RS07645 PF03846 Cell division inhibitor SulA LFERR_RS07650 PF00817 impB/mucB/samB family LFERR_RS07655 PF07733 Bacterial DNA polymerase III alpha subunit LFERR_RS07655 PF14579 Helix-hairpin-helix motif LFERR_RS07660 PF13098 Thioredoxin-like domain LFERR_RS07665 PF01433 Peptidase family M1 LFERR_RS07665 PF11940 Domain of unknown function (DUF3458) LFERR_RS07670 PF01928 CYTH domain LFERR_RS07670 PF05235 CHAD domain LFERR_RS07675 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFERR_RS07680 PF02503 Polyphosphate kinase middle domain LFERR_RS07680 PF13089 Polyphosphate kinase N-terminal domain LFERR_RS07680 PF13090 Polyphosphate kinase C-terminal domain LFERR_RS07685 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LFERR_RS07685 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LFERR_RS07690 PF00873 AcrB/AcrD/AcrF family LFERR_RS07695 PF00529 HlyD family secretion protein LFERR_RS07695 PF16576 LFERR_RS07695 LFERR_RS07700 PF02321 Outer membrane efflux protein LFERR_RS07705 PF13432 Tetratricopeptide repeat LFERR_RS07710 PF02545 Maf-like protein LFERR_RS07715 PF00311 Phosphoenolpyruvate carboxylase LFERR_RS07725 PF01926 50S ribosome-binding GTPase LFERR_RS07725 PF13167 LFERR_RS07725 LFERR_RS07725 PF16360 LFERR_RS07725 LFERR_RS07730 PF01145 SPFH domain / Band 7 family LFERR_RS07730 PF12221 LFERR_RS07730 LFERR_RS07735 PF01145 SPFH domain / Band 7 family LFERR_RS07740 PF13393 Histidyl-tRNA synthetase LFERR_RS07745 PF00709 Adenylosuccinate synthetase LFERR_RS07755 PF00575 S1 RNA binding domain LFERR_RS07755 PF00773 RNB domain LFERR_RS07755 PF08206 Ribonuclease B OB domain LFERR_RS07755 PF08461 Ribonuclease R winged-helix domain LFERR_RS07760 PF03976 Polyphosphate kinase 2 (PPK2) LFERR_RS07765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFERR_RS07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS07770 PF00994 Probable molybdopterin binding domain LFERR_RS07775 PF01548 LFERR_RS07775 LFERR_RS07775 PF02371 LFERR_RS07775 LFERR_RS07780 PF00551 Formyl transferase LFERR_RS07785 PF01548 LFERR_RS07785 LFERR_RS07785 PF02371 LFERR_RS07785 LFERR_RS07790 PF00551 Formyl transferase LFERR_RS07795 PF00586 AIR synthase related protein, N-terminal domain LFERR_RS07795 PF02769 AIR synthase related protein, C-terminal domain LFERR_RS07800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LFERR_RS07805 PF01066 CDP-alcohol phosphatidyltransferase LFERR_RS07810 PF00308 Bacterial dnaA protein LFERR_RS07815 PF03631 LFERR_RS07815 LFERR_RS07820 PF02620 LFERR_RS07820 LFERR_RS07825 PF02504 Fatty acid synthesis protein LFERR_RS07830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFERR_RS07830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFERR_RS07835 PF00698 Acyl transferase domain LFERR_RS07840 PF13561 Enoyl-(Acyl carrier protein) reductase LFERR_RS07845 PF00550 Phosphopantetheine attachment site LFERR_RS07850 PF00109 Beta-ketoacyl synthase, N-terminal domain LFERR_RS07850 PF02801 Beta-ketoacyl synthase, C-terminal domain LFERR_RS07855 PF01063 Aminotransferase class IV LFERR_RS07860 PF02618 YceG-like family LFERR_RS07865 PF02223 Thymidylate kinase LFERR_RS07870 PF09115 DNA polymerase III, delta subunit, C terminal LFERR_RS07870 PF13177 DNA polymerase III, delta subunit LFERR_RS07875 PF07238 PilZ domain LFERR_RS07885 PF12169 DNA polymerase III subunits gamma and tau domain III LFERR_RS07885 PF13177 DNA polymerase III, delta subunit LFERR_RS07890 PF02575 YbaB/EbfC DNA-binding family LFERR_RS07895 PF02132 RecR protein LFERR_RS07895 PF13662 Toprim domain LFERR_RS07900 PF00909 Ammonium Transporter Family LFERR_RS07905 PF01256 Carbohydrate kinase LFERR_RS07910 PF00202 Aminotransferase class-III LFERR_RS07915 PF00571 CBS domain LFERR_RS07920 PF02367 Uncharacterised P-loop hydrolase UPF0079 LFERR_RS07925 PF01119 DNA mismatch repair protein, C-terminal domain LFERR_RS07925 PF08676 MutL C terminal dimerisation domain LFERR_RS07925 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS07930 PF01715 IPP transferase LFERR_RS07935 PF00334 Nucleoside diphosphate kinase LFERR_RS07940 PF04055 Radical SAM superfamily LFERR_RS07945 PF13181 Tetratricopeptide repeat LFERR_RS07945 PF13432 Tetratricopeptide repeat LFERR_RS07950 PF13413 Helix-turn-helix domain LFERR_RS07950 PF13464 LFERR_RS07950 LFERR_RS07955 PF04551 GcpE protein LFERR_RS07960 PF13393 Histidyl-tRNA synthetase LFERR_RS07965 PF09976 Tetratricopeptide repeat LFERR_RS07970 PF13360 PQQ-like domain LFERR_RS07975 PF01926 50S ribosome-binding GTPase LFERR_RS07975 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LFERR_RS07985 PF12849 PBP superfamily domain LFERR_RS07990 PF00528 Binding-protein-dependent transport system inner membrane component LFERR_RS07995 PF00528 Binding-protein-dependent transport system inner membrane component LFERR_RS08000 PF01814 Hemerythrin HHE cation binding domain LFERR_RS08000 PF10006 LFERR_RS08000 LFERR_RS08005 PF13098 Thioredoxin-like domain LFERR_RS08010 PF01925 LFERR_RS08010 LFERR_RS08020 PF00873 AcrB/AcrD/AcrF family LFERR_RS08025 PF16576 LFERR_RS08025 LFERR_RS08030 PF02321 Outer membrane efflux protein LFERR_RS08040 PF01161 Phosphatidylethanolamine-binding protein LFERR_RS08045 PF09968 Uncharacterized protein domain (DUF2202) LFERR_RS08050 PF12838 4Fe-4S dicluster domain LFERR_RS08060 PF01475 Ferric uptake regulator family LFERR_RS08065 PF01266 FAD dependent oxidoreductase LFERR_RS08070 PF04357 LFERR_RS08070 LFERR_RS08075 PF01103 Surface antigen LFERR_RS08075 PF07244 Surface antigen variable number repeat LFERR_RS08085 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LFERR_RS08090 PF07690 Major Facilitator Superfamily LFERR_RS08095 PF00034 Cytochrome c LFERR_RS08105 PF00487 LFERR_RS08105 LFERR_RS08115 PF01370 NAD dependent epimerase/dehydratase family LFERR_RS08120 PF01370 NAD dependent epimerase/dehydratase family LFERR_RS08125 PF00999 Sodium/hydrogen exchanger family LFERR_RS08125 PF02080 TrkA-C domain LFERR_RS08125 PF02254 TrkA-N domain LFERR_RS08130 PF00501 AMP-binding enzyme LFERR_RS08130 PF13193 AMP-binding enzyme C-terminal domain LFERR_RS08130 PF16177 LFERR_RS08130 LFERR_RS08135 PF00004 ATPase family associated with various cellular activities (AAA) LFERR_RS08135 PF02861 Clp amino terminal domain LFERR_RS08135 PF07724 AAA domain (Cdc48 subfamily) LFERR_RS08135 PF10431 C-terminal, D2-small domain, of ClpB protein LFERR_RS08140 PF12832 MFS_1 like family LFERR_RS08145 PF01264 Chorismate synthase LFERR_RS08150 PF02649 Type I GTP cyclohydrolase folE2 LFERR_RS08155 PF02779 Transketolase, pyrimidine binding domain LFERR_RS08155 PF02780 Transketolase, C-terminal domain LFERR_RS08155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFERR_RS08160 PF00348 Polyprenyl synthetase LFERR_RS08165 PF02609 Exonuclease VII small subunit LFERR_RS08170 PF07690 Major Facilitator Superfamily LFERR_RS08175 PF03544 Gram-negative bacterial TonB protein C-terminal LFERR_RS08180 PF00085 Thioredoxin LFERR_RS08185 PF02601 LFERR_RS08185 LFERR_RS08185 PF13742 LFERR_RS08185 LFERR_RS08190 PF13360 PQQ-like domain LFERR_RS08195 PF13767 LFERR_RS08195 LFERR_RS08200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFERR_RS08205 PF00149 Calcineurin-like phosphoesterase LFERR_RS08210 PF00122 E1-E2 ATPase LFERR_RS08210 PF00689 Cation transporting ATPase, C-terminus LFERR_RS08210 PF00690 Cation transporter/ATPase, N-terminus LFERR_RS08210 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS08215 PF00682 HMGL-like LFERR_RS08215 PF08502 LeuA allosteric (dimerisation) domain LFERR_RS08220 PF01037 AsnC family LFERR_RS08220 PF13412 Winged helix-turn-helix DNA-binding LFERR_RS08230 PF03595 Voltage-dependent anion channel LFERR_RS08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS08235 PF03466 LysR substrate binding domain LFERR_RS08240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFERR_RS08245 PF00196 Bacterial regulatory proteins, luxR family LFERR_RS08245 PF03472 Autoinducer binding domain LFERR_RS08250 PF16245 LFERR_RS08250 LFERR_RS08255 PF00765 Autoinducer synthetase LFERR_RS08275 PF00583 Acetyltransferase (GNAT) family LFERR_RS08280 PF01965 DJ-1/PfpI family LFERR_RS08285 PF04299 Putative FMN-binding domain LFERR_RS08290 PF01841 Transglutaminase-like superfamily LFERR_RS08295 PF10604 Polyketide cyclase / dehydrase and lipid transport LFERR_RS08300 PF00440 Bacterial regulatory proteins, tetR family LFERR_RS08305 PF17074 LFERR_RS08305 LFERR_RS08310 PF12802 MarR family LFERR_RS08315 PF02627 Carboxymuconolactone decarboxylase family LFERR_RS08320 PF00583 Acetyltransferase (GNAT) family LFERR_RS08330 PF04012 LFERR_RS08330 LFERR_RS08335 PF01906 Putative heavy-metal-binding LFERR_RS08340 PF01906 Putative heavy-metal-binding LFERR_RS08350 PF00122 E1-E2 ATPase LFERR_RS08350 PF00403 Heavy-metal-associated domain LFERR_RS08350 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS08355 PF00155 Aminotransferase class I and II LFERR_RS08360 PF02222 ATP-grasp domain LFERR_RS08365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFERR_RS08365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFERR_RS08370 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFERR_RS08370 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFERR_RS08375 PF12840 Helix-turn-helix domain LFERR_RS08380 PF01207 Dihydrouridine synthase (Dus) LFERR_RS08385 PF00521 DNA gyrase/topoisomerase IV, subunit A LFERR_RS08390 PF00204 DNA gyrase B LFERR_RS08390 PF00986 DNA gyrase B subunit, carboxyl terminus LFERR_RS08390 PF01751 Toprim domain LFERR_RS08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS08395 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS08395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS08400 PF00072 Response regulator receiver domain LFERR_RS08400 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS08405 PF03413 Peptidase propeptide and YPEB domain LFERR_RS08415 PF00873 AcrB/AcrD/AcrF family LFERR_RS08420 PF16576 LFERR_RS08420 LFERR_RS08425 PF02321 Outer membrane efflux protein LFERR_RS08430 PF00593 TonB dependent receptor LFERR_RS08440 PF00873 AcrB/AcrD/AcrF family LFERR_RS08445 PF13437 HlyD family secretion protein LFERR_RS08450 PF02321 Outer membrane efflux protein LFERR_RS08455 PF00231 ATP synthase LFERR_RS08475 PF00892 EamA-like transporter family LFERR_RS08480 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LFERR_RS08480 PF09363 XFP C-terminal domain LFERR_RS08480 PF09364 XFP N-terminal domain LFERR_RS08485 PF04338 Protein of unknown function, DUF481 LFERR_RS08495 PF02355 Protein export membrane protein LFERR_RS08495 PF07549 SecD/SecF GG Motif LFERR_RS08500 PF02355 Protein export membrane protein LFERR_RS08500 PF07549 SecD/SecF GG Motif LFERR_RS08500 PF13721 SecD export protein N-terminal TM region LFERR_RS08505 PF02699 Preprotein translocase subunit LFERR_RS08510 PF01702 Queuine tRNA-ribosyltransferase LFERR_RS08515 PF02547 Queuosine biosynthesis protein LFERR_RS08520 PF00571 CBS domain LFERR_RS08520 PF01595 LFERR_RS08520 LFERR_RS08520 PF03471 Transporter associated domain LFERR_RS08525 PF00571 CBS domain LFERR_RS08530 PF01053 Cys/Met metabolism PLP-dependent enzyme LFERR_RS08535 PF00156 Phosphoribosyl transferase domain LFERR_RS08535 PF13537 Glutamine amidotransferase domain LFERR_RS08540 PF02674 LFERR_RS08540 LFERR_RS08545 PF02875 Mur ligase family, glutamate ligase domain LFERR_RS08545 PF08245 Mur ligase middle domain LFERR_RS08550 PF01039 Carboxyl transferase domain LFERR_RS08555 PF00290 Tryptophan synthase alpha chain LFERR_RS08560 PF00291 Pyridoxal-phosphate dependent enzyme LFERR_RS08565 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LFERR_RS08570 PF01416 tRNA pseudouridine synthase LFERR_RS08575 PF13432 Tetratricopeptide repeat LFERR_RS08580 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFERR_RS08580 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFERR_RS08585 PF00180 Isocitrate/isopropylmalate dehydrogenase LFERR_RS08590 PF12804 MobA-like NTP transferase domain LFERR_RS08595 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LFERR_RS08600 PF00994 Probable molybdopterin binding domain LFERR_RS08600 PF03453 MoeA N-terminal region (domain I and II) LFERR_RS08600 PF03454 MoeA C-terminal region (domain IV) LFERR_RS08605 PF13091 PLD-like domain LFERR_RS08610 PF01343 Peptidase family S49 LFERR_RS08615 PF00128 Alpha amylase, catalytic domain LFERR_RS08620 PF00128 Alpha amylase, catalytic domain LFERR_RS08620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFERR_RS08620 PF11941 Domain of unknown function (DUF3459) LFERR_RS08625 PF00534 Glycosyl transferases group 1 LFERR_RS08635 PF01738 Dienelactone hydrolase family LFERR_RS08640 PF00011 Hsp20/alpha crystallin family LFERR_RS08645 PF08240 Alcohol dehydrogenase GroES-like domain LFERR_RS08650 PF03734 L,D-transpeptidase catalytic domain LFERR_RS08655 PF01435 Peptidase family M48 LFERR_RS08660 PF07690 Major Facilitator Superfamily LFERR_RS08690 PF05717 LFERR_RS08690 LFERR_RS08695 PF03050 LFERR_RS08695 LFERR_RS08695 PF13005 LFERR_RS08695 LFERR_RS08695 PF13007 LFERR_RS08695 LFERR_RS08695 PF13817 LFERR_RS08695 LFERR_RS08705 PF02321 Outer membrane efflux protein LFERR_RS08710 PF16576 LFERR_RS08710 LFERR_RS08715 PF00873 AcrB/AcrD/AcrF family LFERR_RS08720 PF00005 ABC transporter LFERR_RS08730 PF13346 LFERR_RS08730 LFERR_RS08745 PF02036 SCP-2 sterol transfer family LFERR_RS08750 PF02637 GatB domain LFERR_RS08750 PF02934 GatB/GatE catalytic domain LFERR_RS08755 PF01425 Amidase LFERR_RS08760 PF02686 Glu-tRNAGln amidotransferase C subunit LFERR_RS08765 PF04333 LFERR_RS08765 LFERR_RS08770 PF05494 Toluene tolerance, Ttg2 LFERR_RS08775 PF04055 Radical SAM superfamily LFERR_RS08775 PF11946 LFERR_RS08775 LFERR_RS08785 PF03706 LFERR_RS08785 LFERR_RS08790 PF03176 MMPL family LFERR_RS08795 PF04794 YdjC-like protein LFERR_RS08800 PF04055 Radical SAM superfamily LFERR_RS08805 PF13506 Glycosyl transferase family 21 LFERR_RS08810 PF01370 NAD dependent epimerase/dehydratase family LFERR_RS08815 PF01048 Phosphorylase superfamily LFERR_RS08820 PF13243 Prenyltransferase-like LFERR_RS08820 PF13249 Prenyltransferase-like LFERR_RS08825 PF00494 Squalene/phytoene synthase LFERR_RS08830 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LFERR_RS08830 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LFERR_RS08835 PF02556 Preprotein translocase subunit SecB LFERR_RS08845 PF01850 PIN domain LFERR_RS08850 PF04014 Antidote-toxin recognition MazE LFERR_RS08855 PF00171 Aldehyde dehydrogenase family LFERR_RS08860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFERR_RS08860 PF03129 Anticodon binding domain LFERR_RS08860 PF04073 Aminoacyl-tRNA editing domain LFERR_RS08865 PF00582 Universal stress protein family LFERR_RS08870 PF03886 Protein of unknown function (DUF330) LFERR_RS08875 PF02470 LFERR_RS08875 LFERR_RS08880 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) LFERR_RS08885 PF00857 Isochorismatase family LFERR_RS08890 PF05299 M61 glycyl aminopeptidase LFERR_RS08890 PF13180 PDZ domain LFERR_RS08895 PF13277 YmdB-like protein LFERR_RS08900 PF01812 5-formyltetrahydrofolate cyclo-ligase family LFERR_RS08905 PF05164 Cell division protein ZapA LFERR_RS08915 PF00905 Penicillin binding protein transpeptidase domain LFERR_RS08915 PF03717 Penicillin-binding Protein dimerisation domain LFERR_RS08920 PF01386 Ribosomal L25p family LFERR_RS08920 PF14693 Ribosomal protein TL5, C-terminal domain LFERR_RS08925 PF01195 Peptidyl-tRNA hydrolase LFERR_RS08930 PF01926 50S ribosome-binding GTPase LFERR_RS08930 PF06071 Protein of unknown function (DUF933) LFERR_RS08935 PF01381 Helix-turn-helix LFERR_RS08935 PF07883 Cupin domain LFERR_RS08940 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LFERR_RS08945 PF00146 NADH dehydrogenase LFERR_RS08955 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LFERR_RS08960 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFERR_RS08960 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFERR_RS08965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFERR_RS08970 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LFERR_RS08970 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LFERR_RS08975 PF07728 AAA domain (dynein-related subfamily) LFERR_RS08975 PF08406 LFERR_RS08975 LFERR_RS08980 PF00092 von Willebrand factor type A domain LFERR_RS08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS08985 PF03466 LysR substrate binding domain LFERR_RS08990 PF03831 PhnA protein LFERR_RS08990 PF08274 PhnA Zinc-Ribbon LFERR_RS09000 PF01841 Transglutaminase-like superfamily LFERR_RS09000 PF12969 Domain of Unknown Function with PDB structure (DUF3857) LFERR_RS09020 PF13437 HlyD family secretion protein LFERR_RS09020 PF13533 Biotin-lipoyl like LFERR_RS09025 PF00005 ABC transporter LFERR_RS09025 PF00664 ABC transporter transmembrane region LFERR_RS09025 PF03412 Peptidase C39 family LFERR_RS09030 PF02321 Outer membrane efflux protein LFERR_RS09035 PF01522 Polysaccharide deacetylase LFERR_RS09040 PF13200 LFERR_RS09040 LFERR_RS09045 PF00144 Beta-lactamase LFERR_RS09050 PF00293 NUDIX domain LFERR_RS09055 PF00293 NUDIX domain LFERR_RS09060 PF00849 RNA pseudouridylate synthase LFERR_RS09060 PF01479 S4 domain LFERR_RS09065 PF04371 Porphyromonas-type peptidyl-arginine deiminase LFERR_RS09070 PF00384 Molybdopterin oxidoreductase LFERR_RS09070 PF01568 Molydopterin dinucleotide binding domain LFERR_RS09070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFERR_RS09075 PF13247 4Fe-4S dicluster domain LFERR_RS09080 PF03916 LFERR_RS09080 LFERR_RS09085 PF02613 Nitrate reductase delta subunit LFERR_RS09100 PF00582 Universal stress protein family LFERR_RS09105 PF07690 Major Facilitator Superfamily LFERR_RS09110 PF12802 MarR family LFERR_RS09115 PF01790 LFERR_RS09115 LFERR_RS09120 PF00580 UvrD/REP helicase N-terminal domain LFERR_RS09120 PF13361 UvrD-like helicase C-terminal domain LFERR_RS09125 PF01649 Ribosomal protein S20 LFERR_RS09130 PF00005 ABC transporter LFERR_RS09135 PF00528 Binding-protein-dependent transport system inner membrane component LFERR_RS09145 PF00149 Calcineurin-like phosphoesterase LFERR_RS09150 PF00270 DEAD/DEAH box helicase LFERR_RS09150 PF00271 Helicase conserved C-terminal domain LFERR_RS09150 PF00570 HRDC domain LFERR_RS09150 PF09382 RQC domain LFERR_RS09150 PF16124 LFERR_RS09150 LFERR_RS09155 PF01491 Frataxin-like domain LFERR_RS09160 PF01878 EVE domain LFERR_RS09170 PF03739 LFERR_RS09170 LFERR_RS09175 PF03739 LFERR_RS09175 LFERR_RS09180 PF00883 Cytosol aminopeptidase family, catalytic domain LFERR_RS09180 PF02789 Cytosol aminopeptidase family, N-terminal domain LFERR_RS09185 PF04364 DNA polymerase III chi subunit, HolC LFERR_RS09195 PF00133 tRNA synthetases class I (I, L, M and V) LFERR_RS09195 PF08264 Anticodon-binding domain of tRNA LFERR_RS09195 PF10458 Valyl tRNA synthetase tRNA binding arm LFERR_RS09200 PF06965 Na+/H+ antiporter 1 LFERR_RS09205 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFERR_RS09205 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFERR_RS09215 PF00440 Bacterial regulatory proteins, tetR family LFERR_RS09215 PF16925 LFERR_RS09215 LFERR_RS09220 PF01738 Dienelactone hydrolase family LFERR_RS09225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFERR_RS09240 PF05656 LFERR_RS09240 LFERR_RS09245 PF05050 Methyltransferase FkbM domain LFERR_RS09250 PF12697 Alpha/beta hydrolase family LFERR_RS09255 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LFERR_RS09260 PF13419 Haloacid dehalogenase-like hydrolase LFERR_RS09265 PF00849 RNA pseudouridylate synthase LFERR_RS09265 PF01479 S4 domain LFERR_RS09270 PF00575 S1 RNA binding domain LFERR_RS09270 PF10150 Ribonuclease E/G family LFERR_RS09275 PF01406 tRNA synthetases class I (C) catalytic domain LFERR_RS09275 PF09190 DALR domain LFERR_RS09280 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFERR_RS09285 PF00905 Penicillin binding protein transpeptidase domain LFERR_RS09285 PF00912 Transglycosylase LFERR_RS09285 PF17092 LFERR_RS09285 LFERR_RS09290 PF00723 Glycosyl hydrolases family 15 LFERR_RS09290 PF09137 Glucodextranase, domain N LFERR_RS09295 PF13561 Enoyl-(Acyl carrier protein) reductase LFERR_RS09305 PF01636 Phosphotransferase enzyme family LFERR_RS09310 PF13419 Haloacid dehalogenase-like hydrolase LFERR_RS09315 PF00072 Response regulator receiver domain LFERR_RS09315 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS09320 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS09320 PF00582 Universal stress protein family LFERR_RS09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS09320 PF02702 Osmosensitive K+ channel His kinase sensor domain LFERR_RS09320 PF13493 Domain of unknown function (DUF4118) LFERR_RS09325 PF09604 LFERR_RS09325 LFERR_RS09330 PF03814 LFERR_RS09330 LFERR_RS09335 PF00122 E1-E2 ATPase LFERR_RS09335 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS09340 PF02669 LFERR_RS09340 LFERR_RS09350 PF00696 Amino acid kinase family LFERR_RS09355 PF07642 LFERR_RS09355 LFERR_RS09360 PF00543 Nitrogen regulatory protein P-II LFERR_RS09380 PF00999 Sodium/hydrogen exchanger family LFERR_RS09385 PF13098 Thioredoxin-like domain LFERR_RS09395 PF04966 Carbohydrate-selective porin, OprB family LFERR_RS09400 PF13360 PQQ-like domain LFERR_RS09405 PF00207 Alpha-2-macroglobulin family LFERR_RS09405 PF01835 MG2 domain LFERR_RS09405 PF07678 A-macroglobulin complement component LFERR_RS09405 PF07703 Alpha-2-macroglobulin family N-terminal region LFERR_RS09405 PF11974 Alpha-2-macroglobulin MG1 domain LFERR_RS09410 PF00905 Penicillin binding protein transpeptidase domain LFERR_RS09410 PF00912 Transglycosylase LFERR_RS09410 PF06832 LFERR_RS09410 LFERR_RS09415 PF03259 Roadblock/LC7 domain LFERR_RS09420 PF00753 Metallo-beta-lactamase superfamily LFERR_RS09425 PF09608 LFERR_RS09425 LFERR_RS09430 PF01925 LFERR_RS09430 LFERR_RS09435 PF00582 Universal stress protein family LFERR_RS09440 PF01808 AICARFT/IMPCHase bienzyme LFERR_RS09440 PF02142 MGS-like domain LFERR_RS09445 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LFERR_RS09445 PF02843 Phosphoribosylglycinamide synthetase, C domain LFERR_RS09445 PF02844 Phosphoribosylglycinamide synthetase, N domain LFERR_RS09450 PF01300 Telomere recombination LFERR_RS09455 PF01218 Coproporphyrinogen III oxidase LFERR_RS09460 PF01180 Dihydroorotate dehydrogenase LFERR_RS09465 PF13673 Acetyltransferase (GNAT) domain LFERR_RS09470 PF04185 Phosphoesterase family LFERR_RS09475 PF03544 Gram-negative bacterial TonB protein C-terminal LFERR_RS09480 PF02472 Biopolymer transport protein ExbD/TolR LFERR_RS09485 PF01618 LFERR_RS09485 LFERR_RS09490 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS09495 PF12092 LFERR_RS09495 LFERR_RS09500 PF01618 LFERR_RS09500 LFERR_RS09505 PF04185 Phosphoesterase family LFERR_RS09510 PF03544 Gram-negative bacterial TonB protein C-terminal LFERR_RS09520 PF00083 Sugar (and other) transporter LFERR_RS09525 PF06754 LFERR_RS09525 LFERR_RS09530 PF05845 Bacterial phosphonate metabolism protein (PhnH) LFERR_RS09535 PF05861 LFERR_RS09535 LFERR_RS09540 PF06007 LFERR_RS09540 LFERR_RS09545 PF00005 ABC transporter LFERR_RS09550 PF00005 ABC transporter LFERR_RS09555 PF07969 Amidohydrolase family LFERR_RS09560 PF06299 LFERR_RS09560 LFERR_RS09570 PF00392 Bacterial regulatory proteins, gntR family LFERR_RS09570 PF07702 UTRA domain LFERR_RS09575 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS09590 PF13304 AAA domain LFERR_RS09600 PF04185 Phosphoesterase family LFERR_RS09605 PF00593 TonB dependent receptor LFERR_RS09605 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS09610 PF01618 LFERR_RS09610 LFERR_RS09615 PF02472 Biopolymer transport protein ExbD/TolR LFERR_RS09620 PF03544 Gram-negative bacterial TonB protein C-terminal LFERR_RS09625 PF00593 TonB dependent receptor LFERR_RS09625 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS09630 PF10282 Lactonase, 7-bladed beta-propeller LFERR_RS09635 PF03544 Gram-negative bacterial TonB protein C-terminal LFERR_RS09645 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS09665 PF00083 Sugar (and other) transporter LFERR_RS09675 PF00300 Histidine phosphatase superfamily (branch 1) LFERR_RS09685 PF03843 LFERR_RS09685 LFERR_RS09690 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS09695 PF00072 Response regulator receiver domain LFERR_RS09695 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS09700 PF00929 Exonuclease LFERR_RS09705 PF00296 Luciferase-like monooxygenase LFERR_RS09710 PF01370 NAD dependent epimerase/dehydratase family LFERR_RS09715 PF11583 P-aminobenzoate N-oxygenase AurF LFERR_RS09720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFERR_RS09720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFERR_RS09720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFERR_RS09725 PF12732 LFERR_RS09725 LFERR_RS09735 PF00122 E1-E2 ATPase LFERR_RS09735 PF00689 Cation transporting ATPase, C-terminus LFERR_RS09735 PF00690 Cation transporter/ATPase, N-terminus LFERR_RS09735 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS09740 PF01292 Prokaryotic cytochrome b561 LFERR_RS09745 PF03988 LFERR_RS09745 LFERR_RS09750 PF07690 Major Facilitator Superfamily LFERR_RS09760 PF00140 Sigma-70 factor, region 1 LFERR_RS09760 PF03979 Sigma-70 factor, region 1 LFERR_RS09760 PF04539 Sigma-70 region 3 LFERR_RS09760 PF04542 Sigma-70 region 2 LFERR_RS09760 PF04545 Sigma-70, region 4 LFERR_RS09760 PF04546 Sigma-70, non-essential region LFERR_RS09765 PF01807 CHC2 zinc finger LFERR_RS09765 PF08275 DNA primase catalytic core, N-terminal domain LFERR_RS09765 PF10410 DnaB-helicase binding domain of primase LFERR_RS09765 PF13155 Toprim-like LFERR_RS09770 PF00488 MutS domain V LFERR_RS09770 PF01713 Smr domain LFERR_RS09775 PF09424 Yqey-like protein LFERR_RS09780 PF01165 Ribosomal protein S21 LFERR_RS09785 PF04542 Sigma-70 region 2 LFERR_RS09785 PF04545 Sigma-70, region 4 LFERR_RS09790 PF01725 Ham1 family LFERR_RS09795 PF01138 3' exoribonuclease family, domain 1 LFERR_RS09795 PF03725 3' exoribonuclease family, domain 2 LFERR_RS09800 PF00027 Cyclic nucleotide-binding domain LFERR_RS09805 PF02190 ATP-dependent protease La (LON) domain LFERR_RS09810 PF04055 Radical SAM superfamily LFERR_RS09810 PF06969 HemN C-terminal domain LFERR_RS09820 PF00849 RNA pseudouridylate synthase LFERR_RS09820 PF01479 S4 domain LFERR_RS09825 PF07690 Major Facilitator Superfamily LFERR_RS09830 PF00768 D-alanyl-D-alanine carboxypeptidase LFERR_RS09835 PF01925 LFERR_RS09835 LFERR_RS09840 PF13649 Methyltransferase domain LFERR_RS09850 PF02769 AIR synthase related protein, C-terminal domain LFERR_RS09850 PF13507 CobB/CobQ-like glutamine amidotransferase domain LFERR_RS09855 PF01259 SAICAR synthetase LFERR_RS09860 PF00206 Lyase LFERR_RS09860 PF10397 Adenylosuccinate lyase C-terminus LFERR_RS09865 PF06804 NlpB/DapX lipoprotein LFERR_RS09870 PF00701 Dihydrodipicolinate synthetase family LFERR_RS09880 PF03006 LFERR_RS09880 LFERR_RS09885 PF01520 N-acetylmuramoyl-L-alanine amidase LFERR_RS09890 PF00085 Thioredoxin LFERR_RS09895 PF00462 Glutaredoxin LFERR_RS09900 PF00581 Rhodanese-like domain LFERR_RS09905 PF11127 Protein of unknown function (DUF2892) LFERR_RS09910 PF00873 AcrB/AcrD/AcrF family LFERR_RS09915 PF16576 LFERR_RS09915 LFERR_RS09920 PF02321 Outer membrane efflux protein LFERR_RS09925 PF01022 Bacterial regulatory protein, arsR family LFERR_RS09935 PF02384 N-6 DNA Methylase LFERR_RS09935 PF12161 HsdM N-terminal domain LFERR_RS09945 PF13166 LFERR_RS09945 LFERR_RS09950 PF00270 DEAD/DEAH box helicase LFERR_RS09950 PF00271 Helicase conserved C-terminal domain LFERR_RS09960 PF01420 Type I restriction modification DNA specificity domain LFERR_RS09970 PF04326 Divergent AAA domain LFERR_RS09975 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFERR_RS09975 PF04851 Type III restriction enzyme, res subunit LFERR_RS09975 PF12008 Type I restriction and modification enzyme - subunit R C terminal LFERR_RS09980 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LFERR_RS09985 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein LFERR_RS09990 PF02036 SCP-2 sterol transfer family LFERR_RS09995 PF00899 ThiF family LFERR_RS10000 PF01026 TatD related DNase LFERR_RS10005 PF01494 FAD binding domain LFERR_RS10010 PF01494 FAD binding domain LFERR_RS10015 PF04380 LFERR_RS10015 LFERR_RS10025 PF01527 Transposase LFERR_RS10030 PF13565 LFERR_RS10030 LFERR_RS10040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LFERR_RS10050 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS10055 PF01695 IstB-like ATP binding protein LFERR_RS10060 PF00665 Integrase core domain LFERR_RS10065 PF00589 Phage integrase family LFERR_RS10070 PF00589 Phage integrase family LFERR_RS10075 PF00589 Phage integrase family LFERR_RS10075 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS10080 PF00665 Integrase core domain LFERR_RS10115 PF00271 Helicase conserved C-terminal domain LFERR_RS10115 PF04851 Type III restriction enzyme, res subunit LFERR_RS10120 PF13673 Acetyltransferase (GNAT) domain LFERR_RS10125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFERR_RS10130 PF00391 PEP-utilising enzyme, mobile domain LFERR_RS10130 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFERR_RS10135 PF01695 IstB-like ATP binding protein LFERR_RS10140 PF04365 Protein of unknown function (DUF497) LFERR_RS10145 PF14384 LFERR_RS10145 LFERR_RS10150 PF04326 Divergent AAA domain LFERR_RS10160 PF01076 Plasmid recombination enzyme LFERR_RS10165 PF01545 Cation efflux family LFERR_RS10170 PF13411 MerR HTH family regulatory protein LFERR_RS10175 PF08241 Methyltransferase domain LFERR_RS10180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFERR_RS10185 PF01545 Cation efflux family LFERR_RS10200 PF11604 Copper binding periplasmic protein CusF LFERR_RS10205 PF01292 Prokaryotic cytochrome b561 LFERR_RS10210 PF01987 Mitochondrial biogenesis AIM24 LFERR_RS10215 PF00873 AcrB/AcrD/AcrF family LFERR_RS10220 PF16576 LFERR_RS10220 LFERR_RS10225 PF02321 Outer membrane efflux protein LFERR_RS10240 PF09851 LFERR_RS10240 LFERR_RS10245 PF00122 E1-E2 ATPase LFERR_RS10245 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS10250 PF14712 LFERR_RS10250 LFERR_RS10270 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS10275 PF03625 Domain of unknown function DUF302 LFERR_RS10280 PF00403 Heavy-metal-associated domain LFERR_RS10285 PF00462 Glutaredoxin LFERR_RS10295 PF12762 LFERR_RS10295 LFERR_RS10300 PF00999 Sodium/hydrogen exchanger family LFERR_RS10320 PF13520 Amino acid permease LFERR_RS10340 PF00543 Nitrogen regulatory protein P-II LFERR_RS10345 PF07642 LFERR_RS10345 LFERR_RS10350 PF00696 Amino acid kinase family LFERR_RS10355 PF14401 LFERR_RS10355 LFERR_RS10360 PF00583 Acetyltransferase (GNAT) family LFERR_RS10370 PF05717 LFERR_RS10370 LFERR_RS10375 PF03050 LFERR_RS10375 LFERR_RS10375 PF13005 LFERR_RS10375 LFERR_RS10375 PF13007 LFERR_RS10375 LFERR_RS10375 PF13817 LFERR_RS10375 LFERR_RS10395 PF02669 LFERR_RS10395 LFERR_RS10400 PF00122 E1-E2 ATPase LFERR_RS10400 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS10405 PF03814 LFERR_RS10405 LFERR_RS10410 PF09604 LFERR_RS10410 LFERR_RS10415 PF03814 LFERR_RS10415 LFERR_RS10420 PF03203 LFERR_RS10420 LFERR_RS10425 PF00403 Heavy-metal-associated domain LFERR_RS10425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFERR_RS10425 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS10430 PF00723 Glycosyl hydrolases family 15 LFERR_RS10430 PF09137 Glucodextranase, domain N LFERR_RS10435 PF13411 MerR HTH family regulatory protein LFERR_RS10465 PF09601 LFERR_RS10465 LFERR_RS10480 PF12112 Protein of unknown function (DUF3579) LFERR_RS10520 PF06527 LFERR_RS10520 LFERR_RS10525 PF05621 LFERR_RS10525 LFERR_RS10540 PF05621 LFERR_RS10540 LFERR_RS10545 PF00665 Integrase core domain LFERR_RS10545 PF09299 Mu transposase, C-terminal LFERR_RS10560 PF13518 Helix-turn-helix domain LFERR_RS10565 PF08721 TnsA endonuclease C terminal LFERR_RS10565 PF08722 TnsA endonuclease N terminal LFERR_RS10570 PF01078 Magnesium chelatase, subunit ChlI LFERR_RS10570 PF13335 LFERR_RS10570 LFERR_RS10575 PF02635 DsrE/DsrF-like family LFERR_RS10580 PF13411 MerR HTH family regulatory protein LFERR_RS10590 PF08238 Sel1 repeat LFERR_RS10595 PF00009 Elongation factor Tu GTP binding domain LFERR_RS10595 PF03144 Elongation factor Tu domain 2 LFERR_RS10595 PF16658 LFERR_RS10595 LFERR_RS10600 PF00583 Acetyltransferase (GNAT) family LFERR_RS10605 PF00814 Glycoprotease family LFERR_RS10610 PF00270 DEAD/DEAH box helicase LFERR_RS10610 PF13307 Helicase C-terminal domain LFERR_RS10620 PF00877 NlpC/P60 family LFERR_RS10625 PF04966 Carbohydrate-selective porin, OprB family LFERR_RS10630 PF04023 FeoA domain LFERR_RS10635 PF02421 Ferrous iron transport protein B LFERR_RS10635 PF07664 LFERR_RS10635 LFERR_RS10635 PF07670 Nucleoside recognition LFERR_RS10640 PF09012 FeoC like transcriptional regulator LFERR_RS10645 PF00795 Carbon-nitrogen hydrolase LFERR_RS10650 PF07722 Peptidase C26 LFERR_RS10655 PF09335 LFERR_RS10655 LFERR_RS10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFERR_RS10670 PF03466 LysR substrate binding domain LFERR_RS10680 PF00248 Aldo/keto reductase family LFERR_RS10685 PF00850 Histone deacetylase domain LFERR_RS10695 PF07728 AAA domain (dynein-related subfamily) LFERR_RS10695 PF08406 LFERR_RS10695 LFERR_RS10725 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LFERR_RS10730 PF04055 Radical SAM superfamily LFERR_RS10735 PF00890 FAD binding domain LFERR_RS10735 PF01494 FAD binding domain LFERR_RS10735 PF05834 LFERR_RS10735 LFERR_RS10745 PF04055 Radical SAM superfamily LFERR_RS10750 PF01597 Glycine cleavage H-protein LFERR_RS10755 PF02635 DsrE/DsrF-like family LFERR_RS10760 PF01597 Glycine cleavage H-protein LFERR_RS10765 PF02754 LFERR_RS10765 LFERR_RS10785 PF13534 4Fe-4S dicluster domain LFERR_RS10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS10800 PF02754 LFERR_RS10800 LFERR_RS10805 PF13183 4Fe-4S dicluster domain LFERR_RS10810 PF13686 DsrE/DsrF/DrsH-like family LFERR_RS10815 PF01206 Sulfurtransferase TusA LFERR_RS10820 PF00581 Rhodanese-like domain LFERR_RS10825 PF04055 Radical SAM superfamily LFERR_RS10825 PF06463 Molybdenum Cofactor Synthesis C LFERR_RS10825 PF13353 4Fe-4S single cluster domain LFERR_RS10835 PF01967 MoaC family LFERR_RS10840 PF06723 MreB/Mbl protein LFERR_RS10845 PF04085 rod shape-determining protein MreC LFERR_RS10850 PF04093 LFERR_RS10850 LFERR_RS10855 PF00905 Penicillin binding protein transpeptidase domain LFERR_RS10855 PF03717 Penicillin-binding Protein dimerisation domain LFERR_RS10860 PF01098 LFERR_RS10860 LFERR_RS10865 PF00768 D-alanyl-D-alanine carboxypeptidase LFERR_RS10865 PF07943 Penicillin-binding protein 5, C-terminal domain LFERR_RS10870 PF04359 Protein of unknown function (DUF493) LFERR_RS10875 PF03099 Biotin/lipoate A/B protein ligase family LFERR_RS10880 PF04055 Radical SAM superfamily LFERR_RS10880 PF16881 LFERR_RS10880 LFERR_RS10885 PF02698 DUF218 domain LFERR_RS10890 PF03734 L,D-transpeptidase catalytic domain LFERR_RS10910 PF03029 Conserved hypothetical ATP binding protein LFERR_RS10920 PF03259 Roadblock/LC7 domain LFERR_RS10925 PF02091 Glycyl-tRNA synthetase alpha subunit LFERR_RS10930 PF02092 LFERR_RS10930 LFERR_RS10935 PF13242 HAD-hyrolase-like LFERR_RS10940 PF01553 Acyltransferase LFERR_RS10945 PF08443 RimK-like ATP-grasp domain LFERR_RS10955 PF02754 LFERR_RS10955 LFERR_RS10965 PF02677 LFERR_RS10965 LFERR_RS10975 PF01510 N-acetylmuramoyl-L-alanine amidase LFERR_RS10980 PF00085 Thioredoxin LFERR_RS10995 PF00043 Glutathione S-transferase, C-terminal domain LFERR_RS10995 PF13409 Glutathione S-transferase, N-terminal domain LFERR_RS11000 PF01638 HxlR-like helix-turn-helix LFERR_RS11005 PF00682 HMGL-like LFERR_RS11005 PF08502 LeuA allosteric (dimerisation) domain LFERR_RS11010 PF00158 Sigma-54 interaction domain LFERR_RS11010 PF08448 PAS fold LFERR_RS11010 PF13384 Homeodomain-like domain LFERR_RS11015 PF13686 DsrE/DsrF/DrsH-like family LFERR_RS11020 PF01206 Sulfurtransferase TusA LFERR_RS11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS11035 PF13649 Methyltransferase domain LFERR_RS11040 PF00005 ABC transporter LFERR_RS11055 PF13411 MerR HTH family regulatory protein LFERR_RS11060 PF00216 Bacterial DNA-binding protein LFERR_RS11065 PF01588 Putative tRNA binding domain LFERR_RS11065 PF03147 Ferredoxin-fold anticodon binding domain LFERR_RS11065 PF03483 B3/4 domain LFERR_RS11065 PF03484 tRNA synthetase B5 domain LFERR_RS11070 PF01409 tRNA synthetases class II core domain (F) LFERR_RS11070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LFERR_RS11075 PF00453 Ribosomal protein L20 LFERR_RS11080 PF01632 Ribosomal protein L35 LFERR_RS11085 PF00707 Translation initiation factor IF-3, C-terminal domain LFERR_RS11085 PF05198 Translation initiation factor IF-3, N-terminal domain LFERR_RS11090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFERR_RS11090 PF02824 TGS domain LFERR_RS11090 PF03129 Anticodon binding domain LFERR_RS11090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFERR_RS11105 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LFERR_RS11110 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LFERR_RS11115 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LFERR_RS11115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFERR_RS11120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LFERR_RS11125 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LFERR_RS11130 PF12838 4Fe-4S dicluster domain LFERR_RS11135 PF00146 NADH dehydrogenase LFERR_RS11140 PF00384 Molybdopterin oxidoreductase LFERR_RS11140 PF01568 Molydopterin dinucleotide binding domain LFERR_RS11140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFERR_RS11140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LFERR_RS11140 PF13510 2Fe-2S iron-sulfur cluster binding domain LFERR_RS11145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFERR_RS11145 PF10531 SLBB domain LFERR_RS11145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFERR_RS11150 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin LFERR_RS11155 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFERR_RS11160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFERR_RS11165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFERR_RS11170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LFERR_RS11180 PF03840 Preprotein translocase SecG subunit LFERR_RS11185 PF00121 Triosephosphate isomerase LFERR_RS11190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFERR_RS11190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFERR_RS11190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFERR_RS11190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFERR_RS11195 PF00809 Pterin binding enzyme LFERR_RS11200 PF00004 ATPase family associated with various cellular activities (AAA) LFERR_RS11200 PF01434 Peptidase family M41 LFERR_RS11200 PF06480 FtsH Extracellular LFERR_RS11205 PF01523 Putative modulator of DNA gyrase LFERR_RS11210 PF00317 Ribonucleotide reductase, all-alpha domain LFERR_RS11210 PF02867 Ribonucleotide reductase, barrel domain LFERR_RS11210 PF03477 ATP cone domain LFERR_RS11215 PF00268 Ribonucleotide reductase, small chain LFERR_RS11225 PF12840 Helix-turn-helix domain LFERR_RS11230 PF07690 Major Facilitator Superfamily LFERR_RS11235 PF02635 DsrE/DsrF-like family LFERR_RS11240 PF00753 Metallo-beta-lactamase superfamily LFERR_RS11265 PF04234 CopC domain LFERR_RS11270 PF05425 LFERR_RS11270 LFERR_RS11280 PF00817 impB/mucB/samB family LFERR_RS11280 PF11798 IMS family HHH motif LFERR_RS11280 PF11799 impB/mucB/samB family C-terminal domain LFERR_RS11285 PF01850 PIN domain LFERR_RS11290 PF01904 Protein of unknown function DUF72 LFERR_RS11300 PF14384 LFERR_RS11300 LFERR_RS11305 PF13520 Amino acid permease LFERR_RS11310 PF00692 dUTPase LFERR_RS11315 PF01883 Domain of unknown function DUF59 LFERR_RS11315 PF10609 ParA/MinD ATPase like LFERR_RS11320 PF03992 Antibiotic biosynthesis monooxygenase LFERR_RS11325 PF01113 Dihydrodipicolinate reductase, N-terminus LFERR_RS11325 PF05173 Dihydrodipicolinate reductase, C-terminus LFERR_RS11330 PF00226 DnaJ domain LFERR_RS11330 PF00684 DnaJ central domain LFERR_RS11330 PF01556 DnaJ C terminal domain LFERR_RS11335 PF00012 Hsp70 protein LFERR_RS11340 PF01025 GrpE LFERR_RS11345 PF01628 HrcA protein C terminal domain LFERR_RS11350 PF00471 Ribosomal protein L33 LFERR_RS11355 PF00830 Ribosomal L28 family LFERR_RS11360 PF01588 Putative tRNA binding domain LFERR_RS11360 PF09334 tRNA synthetases class I (M) LFERR_RS11365 PF00793 DAHP synthetase I family LFERR_RS11370 PF00206 Lyase LFERR_RS11370 PF10415 Fumarase C C-terminus LFERR_RS11375 PF01432 Peptidase family M3 LFERR_RS11375 PF08439 Oligopeptidase F LFERR_RS11380 PF08897 LFERR_RS11380 LFERR_RS11395 PF00534 Glycosyl transferases group 1 LFERR_RS11395 PF08323 Starch synthase catalytic domain LFERR_RS11400 PF00753 Metallo-beta-lactamase superfamily LFERR_RS11400 PF07521 RNA-metabolising metallo-beta-lactamase LFERR_RS11400 PF10996 Beta-Casp domain LFERR_RS11410 PF00633 Helix-hairpin-helix motif LFERR_RS11410 PF00730 HhH-GPD superfamily base excision DNA repair protein LFERR_RS11410 PF10576 Iron-sulfur binding domain of endonuclease III LFERR_RS11415 PF01724 Domain of unknown function DUF29 LFERR_RS11415 PF13374 Tetratricopeptide repeat LFERR_RS11415 PF14559 Tetratricopeptide repeat LFERR_RS11420 PF03895 YadA-like C-terminal region LFERR_RS11420 PF05658 Head domain of trimeric autotransporter adhesin LFERR_RS11420 PF05662 Coiled stalk of trimeric autotransporter adhesin LFERR_RS11425 PF00691 OmpA family LFERR_RS11430 PF08238 Sel1 repeat LFERR_RS11450 PF02321 Outer membrane efflux protein LFERR_RS11455 PF13437 HlyD family secretion protein LFERR_RS11455 PF13533 Biotin-lipoyl like LFERR_RS11460 PF00005 ABC transporter LFERR_RS11460 PF00664 ABC transporter transmembrane region LFERR_RS11460 PF03412 Peptidase C39 family LFERR_RS11465 PF11180 LFERR_RS11465 LFERR_RS11470 PF00158 Sigma-54 interaction domain LFERR_RS11470 PF02954 Bacterial regulatory protein, Fis family LFERR_RS11475 PF09977 LFERR_RS11475 LFERR_RS11475 PF13400 LFERR_RS11475 LFERR_RS11485 PF13432 Tetratricopeptide repeat LFERR_RS11490 PF00482 Type II secretion system (T2SS), protein F LFERR_RS11495 PF00482 Type II secretion system (T2SS), protein F LFERR_RS11500 PF00437 Type II/IV secretion system protein LFERR_RS11505 PF16968 LFERR_RS11505 LFERR_RS11510 PF00263 LFERR_RS11510 LFERR_RS11510 PF13629 LFERR_RS11510 LFERR_RS11515 PF08666 SAF domain LFERR_RS11515 PF16976 LFERR_RS11515 LFERR_RS11520 PF07811 LFERR_RS11520 LFERR_RS11525 PF01478 Type IV leader peptidase family LFERR_RS11540 PF04964 LFERR_RS11540 LFERR_RS11555 PF14373 LFERR_RS11555 LFERR_RS11565 PF00583 Acetyltransferase (GNAT) family LFERR_RS11570 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 LFERR_RS11570 PF13374 Tetratricopeptide repeat LFERR_RS11570 PF13432 Tetratricopeptide repeat LFERR_RS11570 PF13469 Sulfotransferase family LFERR_RS11570 PF14559 Tetratricopeptide repeat LFERR_RS11575 PF10861 LFERR_RS11575 LFERR_RS11580 PF13597 Anaerobic ribonucleoside-triphosphate reductase LFERR_RS11585 PF13597 Anaerobic ribonucleoside-triphosphate reductase LFERR_RS11590 PF04055 Radical SAM superfamily LFERR_RS11590 PF13353 4Fe-4S single cluster domain LFERR_RS11595 PF01976 LFERR_RS11595 LFERR_RS11600 PF01136 LFERR_RS11600 LFERR_RS11605 PF01136 LFERR_RS11605 LFERR_RS11610 PF02036 SCP-2 sterol transfer family LFERR_RS11615 PF03060 Nitronate monooxygenase LFERR_RS11625 PF00034 Cytochrome c LFERR_RS11630 PF00106 short chain dehydrogenase LFERR_RS11635 PF00355 Rieske [2Fe-2S] domain LFERR_RS11635 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LFERR_RS11640 PF00032 Cytochrome b(C-terminal)/b6/petD LFERR_RS11640 PF00033 Cytochrome b(N-terminal)/b6/petB LFERR_RS11645 PF02167 Cytochrome C1 family LFERR_RS11655 PF03703 LFERR_RS11655 LFERR_RS11660 PF01292 Prokaryotic cytochrome b561 LFERR_RS11670 PF01728 FtsJ-like methyltransferase LFERR_RS11675 PF01985 CRS1 / YhbY (CRM) domain LFERR_RS11680 PF04379 Protein of unknown function (DUF525) LFERR_RS11685 PF08241 Methyltransferase domain LFERR_RS11690 PF00009 Elongation factor Tu GTP binding domain LFERR_RS11690 PF00679 Elongation factor G C-terminus LFERR_RS11690 PF03144 Elongation factor Tu domain 2 LFERR_RS11695 PF07396 Phosphate-selective porin O and P LFERR_RS11705 PF01678 Diaminopimelate epimerase LFERR_RS11710 PF04340 Protein of unknown function, DUF484 LFERR_RS11715 PF00589 Phage integrase family LFERR_RS11715 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS11720 PF00227 Proteasome subunit LFERR_RS11725 PF00004 ATPase family associated with various cellular activities (AAA) LFERR_RS11725 PF07724 AAA domain (Cdc48 subfamily) LFERR_RS11725 PF10431 C-terminal, D2-small domain, of ClpB protein LFERR_RS11735 PF00140 Sigma-70 factor, region 1 LFERR_RS11735 PF04542 Sigma-70 region 2 LFERR_RS11735 PF04545 Sigma-70, region 4 LFERR_RS11740 PF02687 LFERR_RS11740 LFERR_RS11745 PF00005 ABC transporter LFERR_RS11750 PF00448 SRP54-type protein, GTPase domain LFERR_RS11750 PF02881 SRP54-type protein, helical bundle domain LFERR_RS11755 PF03602 Conserved hypothetical protein 95 LFERR_RS11760 PF01467 Cytidylyltransferase LFERR_RS11765 PF00037 4Fe-4S binding domain LFERR_RS11770 PF00350 Dynamin family LFERR_RS11775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFERR_RS11775 PF06827 Zinc finger found in FPG and IleRS LFERR_RS11775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFERR_RS11780 PF05175 Methyltransferase small domain LFERR_RS11785 PF00472 RF-1 domain LFERR_RS11785 PF03462 PCRF domain LFERR_RS11790 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LFERR_RS11790 PF01488 Shikimate / quinate 5-dehydrogenase LFERR_RS11790 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LFERR_RS11795 PF13432 Tetratricopeptide repeat LFERR_RS11795 PF14559 Tetratricopeptide repeat LFERR_RS11800 PF03550 Outer membrane lipoprotein LolB LFERR_RS11805 PF00288 GHMP kinases N terminal domain LFERR_RS11805 PF08544 GHMP kinases C terminal LFERR_RS11815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LFERR_RS11815 PF14572 Phosphoribosyl synthetase-associated domain LFERR_RS11830 PF01396 LFERR_RS11830 LFERR_RS11830 PF04471 Restriction endonuclease LFERR_RS11840 PF04014 Antidote-toxin recognition MazE LFERR_RS11850 PF00043 Glutathione S-transferase, C-terminal domain LFERR_RS11850 PF02798 Glutathione S-transferase, N-terminal domain LFERR_RS11870 PF01925 LFERR_RS11870 LFERR_RS11875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFERR_RS11880 PF01695 IstB-like ATP binding protein LFERR_RS11885 PF00665 Integrase core domain LFERR_RS11890 PF00205 Thiamine pyrophosphate enzyme, central domain LFERR_RS11890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFERR_RS11895 PF12146 Putative lysophospholipase LFERR_RS11900 PF00122 E1-E2 ATPase LFERR_RS11900 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS11915 PF11604 Copper binding periplasmic protein CusF LFERR_RS11930 PF07642 LFERR_RS11930 LFERR_RS11935 PF01906 Putative heavy-metal-binding LFERR_RS11945 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFERR_RS11945 PF04851 Type III restriction enzyme, res subunit LFERR_RS11945 PF11867 LFERR_RS11945 LFERR_RS11955 PF01420 Type I restriction modification DNA specificity domain LFERR_RS11960 PF16277 LFERR_RS11960 LFERR_RS11970 PF02384 N-6 DNA Methylase LFERR_RS11970 PF12161 HsdM N-terminal domain LFERR_RS11975 PF10544 LFERR_RS11975 LFERR_RS11980 PF12840 Helix-turn-helix domain LFERR_RS11990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFERR_RS11995 PF02805 Metal binding domain of Ada LFERR_RS11995 PF06029 AlkA N-terminal domain LFERR_RS11995 PF12833 Helix-turn-helix domain LFERR_RS12000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFERR_RS12005 PF13561 Enoyl-(Acyl carrier protein) reductase LFERR_RS12020 PF03358 NADPH-dependent FMN reductase LFERR_RS12025 PF10604 Polyketide cyclase / dehydrase and lipid transport LFERR_RS12030 PF07883 Cupin domain LFERR_RS12035 PF01841 Transglutaminase-like superfamily LFERR_RS12040 PF04299 Putative FMN-binding domain LFERR_RS12050 PF11839 LFERR_RS12050 LFERR_RS12060 PF00557 Metallopeptidase family M24 LFERR_RS12060 PF05195 Aminopeptidase P, N-terminal domain LFERR_RS12065 PF13767 LFERR_RS12065 LFERR_RS12070 PF13481 AAA domain LFERR_RS12070 PF13541 Subunit ChlI of Mg-chelatase LFERR_RS12075 PF00842 Alanine racemase, C-terminal domain LFERR_RS12075 PF01168 Alanine racemase, N-terminal domain LFERR_RS12080 PF00772 DnaB-like helicase N terminal domain LFERR_RS12080 PF03796 DnaB-like helicase C terminal domain LFERR_RS12085 PF01281 Ribosomal protein L9, N-terminal domain LFERR_RS12085 PF03948 Ribosomal protein L9, C-terminal domain LFERR_RS12090 PF09991 LFERR_RS12090 LFERR_RS12095 PF01084 Ribosomal protein S18 LFERR_RS12100 PF01250 Ribosomal protein S6 LFERR_RS12105 PF00933 Glycosyl hydrolase family 3 N terminal domain LFERR_RS12110 PF13520 Amino acid permease LFERR_RS12115 PF03734 L,D-transpeptidase catalytic domain LFERR_RS12120 PF01938 TRAM domain LFERR_RS12120 PF05958 tRNA (Uracil-5-)-methyltransferase LFERR_RS12125 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB LFERR_RS12140 PF00291 Pyridoxal-phosphate dependent enzyme LFERR_RS12145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFERR_RS12150 PF01145 SPFH domain / Band 7 family LFERR_RS12150 PF16200 LFERR_RS12150 LFERR_RS12160 PF00128 Alpha amylase, catalytic domain LFERR_RS12160 PF02806 Alpha amylase, C-terminal all-beta domain LFERR_RS12160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFERR_RS12170 PF00483 Nucleotidyl transferase LFERR_RS12175 PF03065 Glycosyl hydrolase family 57 LFERR_RS12180 PF03065 Glycosyl hydrolase family 57 LFERR_RS12180 PF09094 Domain of unknown function (DUF1925) LFERR_RS12180 PF09095 Domain of unknown function (DUF1926) LFERR_RS12185 PF00480 ROK family LFERR_RS12190 PF01177 Asp/Glu/Hydantoin racemase LFERR_RS12195 PF04286 LFERR_RS12195 LFERR_RS12200 PF01679 LFERR_RS12200 LFERR_RS12205 PF00436 Single-strand binding protein family LFERR_RS12220 PF00085 Thioredoxin LFERR_RS12220 PF14559 Tetratricopeptide repeat LFERR_RS12220 PF14561 Tetratricopeptide repeat LFERR_RS12225 PF13180 PDZ domain LFERR_RS12225 PF13365 Trypsin-like peptidase domain LFERR_RS12230 PF00589 Phage integrase family LFERR_RS12230 PF02899 Phage integrase, N-terminal SAM-like domain LFERR_RS12240 PF01245 Ribosomal protein L19 LFERR_RS12245 PF01746 tRNA (Guanine-1)-methyltransferase LFERR_RS12250 PF01782 RimM N-terminal domain LFERR_RS12250 PF05239 PRC-barrel domain LFERR_RS12255 PF00886 Ribosomal protein S16 LFERR_RS12260 PF00448 SRP54-type protein, GTPase domain LFERR_RS12260 PF02881 SRP54-type protein, helical bundle domain LFERR_RS12260 PF02978 Signal peptide binding domain LFERR_RS12265 PF03358 NADPH-dependent FMN reductase LFERR_RS12270 PF02040 LFERR_RS12270 LFERR_RS12275 PF12840 Helix-turn-helix domain LFERR_RS12280 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFERR_RS12285 PF13533 Biotin-lipoyl like LFERR_RS12285 PF16576 LFERR_RS12285 LFERR_RS12290 PF00005 ABC transporter LFERR_RS12295 PF12698 ABC-2 family transporter protein LFERR_RS12300 PF12698 ABC-2 family transporter protein LFERR_RS12315 PF13192 Thioredoxin domain LFERR_RS12320 PF01814 Hemerythrin HHE cation binding domain LFERR_RS12325 PF01597 Glycine cleavage H-protein LFERR_RS12335 PF02643 Uncharacterized ACR, COG1430 LFERR_RS12345 PF13686 DsrE/DsrF/DrsH-like family LFERR_RS12350 PF00069 Protein kinase domain LFERR_RS12350 PF01396 LFERR_RS12350 LFERR_RS12355 PF13672 Protein phosphatase 2C LFERR_RS12360 PF00092 von Willebrand factor type A domain LFERR_RS12370 PF03167 Uracil DNA glycosylase superfamily LFERR_RS12375 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LFERR_RS12380 PF04014 Antidote-toxin recognition MazE LFERR_RS12390 PF01850 PIN domain LFERR_RS12395 PF04014 Antidote-toxin recognition MazE LFERR_RS12405 PF09685 LFERR_RS12405 LFERR_RS12410 PF00005 ABC transporter LFERR_RS12410 PF12848 ABC transporter LFERR_RS12410 PF16326 LFERR_RS12410 LFERR_RS12425 PF00905 Penicillin binding protein transpeptidase domain LFERR_RS12425 PF03717 Penicillin-binding Protein dimerisation domain LFERR_RS12430 PF04932 LFERR_RS12430 LFERR_RS12440 PF00348 Polyprenyl synthetase LFERR_RS12450 PF00072 Response regulator receiver domain LFERR_RS12450 PF00158 Sigma-54 interaction domain LFERR_RS12450 PF02954 Bacterial regulatory protein, Fis family LFERR_RS12455 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS12455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS12455 PF08448 PAS fold LFERR_RS12460 PF00227 Proteasome subunit LFERR_RS12465 PF14403 LFERR_RS12465 LFERR_RS12470 PF04168 LFERR_RS12470 LFERR_RS12475 PF01841 Transglutaminase-like superfamily LFERR_RS12475 PF08379 LFERR_RS12475 LFERR_RS12475 PF09899 LFERR_RS12475 LFERR_RS12480 PF06798 LFERR_RS12480 LFERR_RS12480 PF08298 PrkA AAA domain LFERR_RS12485 PF00909 Ammonium Transporter Family LFERR_RS12490 PF04285 LFERR_RS12490 LFERR_RS12495 PF04293 LFERR_RS12495 LFERR_RS12500 PF07642 LFERR_RS12500 LFERR_RS12505 PF00543 Nitrogen regulatory protein P-II LFERR_RS12510 PF00909 Ammonium Transporter Family LFERR_RS12515 PF00117 Glutamine amidotransferase class-I LFERR_RS12525 PF13488 LFERR_RS12525 LFERR_RS12530 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel LFERR_RS12535 PF14373 LFERR_RS12535 LFERR_RS12540 PF02254 TrkA-N domain LFERR_RS12540 PF07885 Ion channel LFERR_RS12545 PF00768 D-alanyl-D-alanine carboxypeptidase LFERR_RS12545 PF07943 Penicillin-binding protein 5, C-terminal domain LFERR_RS12550 PF00342 Phosphoglucose isomerase LFERR_RS12555 PF13231 LFERR_RS12555 LFERR_RS12560 PF02537 LFERR_RS12560 LFERR_RS12565 PF02641 Uncharacterized ACR, COG1993 LFERR_RS12570 PF00432 Prenyltransferase and squalene oxidase repeat LFERR_RS12575 PF02353 Mycolic acid cyclopropane synthetase LFERR_RS12580 PF06736 LFERR_RS12580 LFERR_RS12585 PF04257 Exodeoxyribonuclease V, gamma subunit LFERR_RS12590 PF00580 UvrD/REP helicase N-terminal domain LFERR_RS12590 PF12705 PD-(D/E)XK nuclease superfamily LFERR_RS12590 PF13361 UvrD-like helicase C-terminal domain LFERR_RS12595 PF13538 UvrD-like helicase C-terminal domain LFERR_RS12595 PF13604 AAA domain LFERR_RS12600 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS12605 PF00593 TonB dependent receptor LFERR_RS12605 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS12610 PF00593 TonB dependent receptor LFERR_RS12610 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS12615 PF01292 Prokaryotic cytochrome b561 LFERR_RS12625 PF00122 E1-E2 ATPase LFERR_RS12625 PF00689 Cation transporting ATPase, C-terminus LFERR_RS12625 PF00690 Cation transporter/ATPase, N-terminus LFERR_RS12625 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS12630 PF01641 SelR domain LFERR_RS12635 PF01625 Peptide methionine sulfoxide reductase LFERR_RS12640 PF13098 Thioredoxin-like domain LFERR_RS12645 PF01467 Cytidylyltransferase LFERR_RS12650 PF02410 Oligomerisation domain LFERR_RS12655 PF02590 Predicted SPOUT methyltransferase LFERR_RS12670 PF02545 Maf-like protein LFERR_RS12675 PF00575 S1 RNA binding domain LFERR_RS12675 PF10150 Ribonuclease E/G family LFERR_RS12680 PF00072 Response regulator receiver domain LFERR_RS12680 PF00158 Sigma-54 interaction domain LFERR_RS12690 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS12690 PF00672 HAMP domain LFERR_RS12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS12700 PF04362 Bacterial Fe(2+) trafficking LFERR_RS12705 PF00483 Nucleotidyl transferase LFERR_RS12705 PF01050 Mannose-6-phosphate isomerase LFERR_RS12715 PF01061 LFERR_RS12715 LFERR_RS12715 PF13946 LFERR_RS12715 LFERR_RS12720 PF00005 ABC transporter LFERR_RS12725 PF05050 Methyltransferase FkbM domain LFERR_RS12730 PF13946 LFERR_RS12730 LFERR_RS12735 PF00534 Glycosyl transferases group 1 LFERR_RS12755 PF03567 Sulfotransferase family LFERR_RS12760 PF01507 Phosphoadenosine phosphosulfate reductase family LFERR_RS12765 PF00009 Elongation factor Tu GTP binding domain LFERR_RS12765 PF01583 Adenylylsulphate kinase LFERR_RS12770 PF00459 Inositol monophosphatase family LFERR_RS12775 PF14323 GxGYxY sequence motif in domain of unknown function LFERR_RS12775 PF16216 LFERR_RS12775 LFERR_RS12780 PF02563 Polysaccharide biosynthesis/export protein LFERR_RS12780 PF10531 SLBB domain LFERR_RS12785 PF00534 Glycosyl transferases group 1 LFERR_RS12790 PF16363 LFERR_RS12790 LFERR_RS12795 PF13649 Methyltransferase domain LFERR_RS12800 PF13649 Methyltransferase domain LFERR_RS12815 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFERR_RS12820 PF01850 PIN domain LFERR_RS12825 PF00005 ABC transporter LFERR_RS12825 PF00664 ABC transporter transmembrane region LFERR_RS12830 PF13673 Acetyltransferase (GNAT) domain LFERR_RS12835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFERR_RS12840 PF00005 ABC transporter LFERR_RS12840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFERR_RS12845 PF00005 ABC transporter LFERR_RS12845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFERR_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component LFERR_RS12855 PF00528 Binding-protein-dependent transport system inner membrane component LFERR_RS12860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFERR_RS12865 PF01841 Transglutaminase-like superfamily LFERR_RS12865 PF12969 Domain of Unknown Function with PDB structure (DUF3857) LFERR_RS12870 PF12969 Domain of Unknown Function with PDB structure (DUF3857) LFERR_RS12870 PF12970 Domain of Unknown Function with PDB structure (DUF3858) LFERR_RS12875 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS12880 PF01914 LFERR_RS12880 LFERR_RS12885 PF00056 lactate/malate dehydrogenase, NAD binding domain LFERR_RS12895 PF01618 LFERR_RS12895 LFERR_RS12900 PF02472 Biopolymer transport protein ExbD/TolR LFERR_RS12905 PF00583 Acetyltransferase (GNAT) family LFERR_RS12910 PF00534 Glycosyl transferases group 1 LFERR_RS12915 PF00107 Zinc-binding dehydrogenase LFERR_RS12915 PF00109 Beta-ketoacyl synthase, N-terminal domain LFERR_RS12915 PF00550 Phosphopantetheine attachment site LFERR_RS12915 PF00698 Acyl transferase domain LFERR_RS12915 PF02801 Beta-ketoacyl synthase, C-terminal domain LFERR_RS12915 PF08659 KR domain LFERR_RS12915 PF14765 Polyketide synthase dehydratase LFERR_RS12915 PF16197 LFERR_RS12915 LFERR_RS12920 PF00155 Aminotransferase class I and II LFERR_RS12925 PF05159 LFERR_RS12925 LFERR_RS12930 PF05159 LFERR_RS12930 LFERR_RS12935 PF00106 short chain dehydrogenase LFERR_RS12940 PF00884 Sulfatase LFERR_RS12945 PF00730 HhH-GPD superfamily base excision DNA repair protein LFERR_RS12945 PF14815 NUDIX domain LFERR_RS12955 PF00391 PEP-utilising enzyme, mobile domain LFERR_RS12955 PF02896 PEP-utilising enzyme, TIM barrel domain LFERR_RS12955 PF05524 PEP-utilising enzyme, N-terminal LFERR_RS12960 PF00381 PTS HPr component phosphorylation site LFERR_RS12965 PF03610 PTS system fructose IIA component LFERR_RS12970 PF03668 LFERR_RS12970 LFERR_RS12975 PF02603 HPr Serine kinase N terminus LFERR_RS12975 PF07475 HPr Serine kinase C-terminal domain LFERR_RS12980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFERR_RS12985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFERR_RS12990 PF00309 LFERR_RS12990 LFERR_RS12990 PF04552 Sigma-54, DNA binding domain LFERR_RS12990 PF04963 Sigma-54 factor, core binding domain LFERR_RS12995 PF00005 ABC transporter LFERR_RS13000 PF03968 OstA-like protein LFERR_RS13005 PF06835 Lipopolysaccharide-assembly, LptC-related LFERR_RS13015 PF00571 CBS domain LFERR_RS13015 PF01380 SIS domain LFERR_RS13030 PF00483 Nucleotidyl transferase LFERR_RS13035 PF01636 Phosphotransferase enzyme family LFERR_RS13040 PF03968 OstA-like protein LFERR_RS13040 PF04453 Organic solvent tolerance protein LFERR_RS13045 PF00639 PPIC-type PPIASE domain LFERR_RS13045 PF09312 SurA N-terminal domain LFERR_RS13050 PF01061 LFERR_RS13050 LFERR_RS13055 PF01722 BolA-like protein LFERR_RS13060 PF00462 Glutaredoxin LFERR_RS13065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFERR_RS13070 PF01634 ATP phosphoribosyltransferase LFERR_RS13075 PF00815 Histidinol dehydrogenase LFERR_RS13080 PF00155 Aminotransferase class I and II LFERR_RS13085 PF00475 Imidazoleglycerol-phosphate dehydratase LFERR_RS13090 PF00117 Glutamine amidotransferase class-I LFERR_RS13095 PF00977 Histidine biosynthesis protein LFERR_RS13100 PF00977 Histidine biosynthesis protein LFERR_RS13105 PF01502 Phosphoribosyl-AMP cyclohydrolase LFERR_RS13105 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LFERR_RS13110 PF02416 mttA/Hcf106 family LFERR_RS13115 PF02416 mttA/Hcf106 family LFERR_RS13120 PF00902 Sec-independent protein translocase protein (TatC) LFERR_RS13125 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LFERR_RS13125 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LFERR_RS13130 PF00101 Ribulose bisphosphate carboxylase, small chain LFERR_RS13135 PF07728 AAA domain (dynein-related subfamily) LFERR_RS13135 PF08406 LFERR_RS13135 LFERR_RS13140 PF00092 von Willebrand factor type A domain LFERR_RS13145 PF00563 EAL domain LFERR_RS13145 PF00990 GGDEF domain LFERR_RS13145 PF13185 GAF domain LFERR_RS13145 PF13426 PAS domain LFERR_RS13150 PF01979 Amidohydrolase family LFERR_RS13155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFERR_RS13155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFERR_RS13160 PF00156 Phosphoribosyl transferase domain LFERR_RS13165 PF03652 Uncharacterised protein family (UPF0081) LFERR_RS13170 PF02622 Uncharacterized ACR, COG1678 LFERR_RS13175 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LFERR_RS13175 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LFERR_RS13180 PF08886 Glutamate-cysteine ligase LFERR_RS13185 PF00285 Citrate synthase LFERR_RS13190 PF01521 Iron-sulphur cluster biosynthesis LFERR_RS13195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFERR_RS13195 PF00364 Biotin-requiring enzyme LFERR_RS13195 PF02817 e3 binding domain LFERR_RS13195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFERR_RS13195 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS13200 PF02779 Transketolase, pyrimidine binding domain LFERR_RS13200 PF02780 Transketolase, C-terminal domain LFERR_RS13205 PF00676 Dehydrogenase E1 component LFERR_RS13220 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFERR_RS13220 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFERR_RS13225 PF00380 Ribosomal protein S9/S16 LFERR_RS13230 PF00572 Ribosomal protein L13 LFERR_RS13240 PF12276 LFERR_RS13240 LFERR_RS13245 PF11127 Protein of unknown function (DUF2892) LFERR_RS13280 PF00579 tRNA synthetases class I (W and Y) LFERR_RS13285 PF00122 E1-E2 ATPase LFERR_RS13285 PF00690 Cation transporter/ATPase, N-terminus LFERR_RS13285 PF00702 haloacid dehalogenase-like hydrolase LFERR_RS13290 PF02261 Aspartate decarboxylase LFERR_RS13295 PF07690 Major Facilitator Superfamily LFERR_RS13300 PF01926 50S ribosome-binding GTPase LFERR_RS13305 PF02254 TrkA-N domain LFERR_RS13305 PF07885 Ion channel LFERR_RS13310 PF00476 DNA polymerase family A LFERR_RS13310 PF01367 5'-3' exonuclease, C-terminal SAM fold LFERR_RS13310 PF01612 3'-5' exonuclease LFERR_RS13310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFERR_RS13315 PF03641 Possible lysine decarboxylase LFERR_RS13320 PF11191 Protein of unknown function (DUF2782) LFERR_RS13325 PF01636 Phosphotransferase enzyme family LFERR_RS13335 PF01292 Prokaryotic cytochrome b561 LFERR_RS13340 PF12836 Helix-hairpin-helix motif LFERR_RS13345 PF00580 UvrD/REP helicase N-terminal domain LFERR_RS13345 PF13361 UvrD-like helicase C-terminal domain LFERR_RS13350 PF00226 DnaJ domain LFERR_RS13350 PF01556 DnaJ C terminal domain LFERR_RS13355 PF13591 MerR HTH family regulatory protein LFERR_RS13360 PF00156 Phosphoribosyl transferase domain LFERR_RS13365 PF02811 PHP domain LFERR_RS13365 PF14520 Helix-hairpin-helix domain LFERR_RS13365 PF14716 Helix-hairpin-helix domain LFERR_RS13365 PF14791 DNA polymerase beta thumb LFERR_RS13375 PF00106 short chain dehydrogenase LFERR_RS13380 PF00032 Cytochrome b(C-terminal)/b6/petD LFERR_RS13380 PF00033 Cytochrome b(N-terminal)/b6/petB LFERR_RS13385 PF02167 Cytochrome C1 family LFERR_RS13390 PF05140 LFERR_RS13390 LFERR_RS13395 PF01578 LFERR_RS13395 LFERR_RS13405 PF06146 LFERR_RS13405 LFERR_RS13410 PF13686 DsrE/DsrF/DrsH-like family LFERR_RS13415 PF01206 Sulfurtransferase TusA LFERR_RS13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFERR_RS13435 PF10993 LFERR_RS13435 LFERR_RS13440 PF00175 Oxidoreductase NAD-binding domain LFERR_RS13440 PF00258 Flavodoxin LFERR_RS13440 PF00667 FAD binding domain LFERR_RS13445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFERR_RS13445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFERR_RS13450 PF01507 Phosphoadenosine phosphosulfate reductase family LFERR_RS13455 PF01507 Phosphoadenosine phosphosulfate reductase family LFERR_RS13460 PF00009 Elongation factor Tu GTP binding domain LFERR_RS13465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFERR_RS13470 PF01903 CbiX LFERR_RS13480 PF00654 Voltage gated chloride channel LFERR_RS13485 PF02416 mttA/Hcf106 family LFERR_RS13505 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS13510 PF00072 Response regulator receiver domain LFERR_RS13510 PF02954 Bacterial regulatory protein, Fis family LFERR_RS13515 PF13640 2OG-Fe(II) oxygenase superfamily LFERR_RS13525 PF02082 Transcriptional regulator LFERR_RS13530 PF07690 Major Facilitator Superfamily LFERR_RS13535 PF01040 UbiA prenyltransferase family LFERR_RS13545 PF00127 Copper binding proteins, plastocyanin/azurin family LFERR_RS13555 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFERR_RS13560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LFERR_RS13570 PF00034 Cytochrome c LFERR_RS13580 PF03050 LFERR_RS13580 LFERR_RS13580 PF13005 LFERR_RS13580 LFERR_RS13590 PF00183 Hsp90 protein LFERR_RS13590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS13595 PF11154 LFERR_RS13595 LFERR_RS13600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFERR_RS13600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFERR_RS13605 PF00583 Acetyltransferase (GNAT) family LFERR_RS13610 PF01817 Chorismate mutase type II LFERR_RS13615 PF00005 ABC transporter LFERR_RS13625 PF00583 Acetyltransferase (GNAT) family LFERR_RS13630 PF04299 Putative FMN-binding domain LFERR_RS13635 PF01841 Transglutaminase-like superfamily LFERR_RS13640 PF07883 Cupin domain LFERR_RS13645 PF10604 Polyketide cyclase / dehydrase and lipid transport LFERR_RS13650 PF00106 short chain dehydrogenase LFERR_RS13655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFERR_RS13660 PF10130 LFERR_RS13660 LFERR_RS13690 PF01695 IstB-like ATP binding protein LFERR_RS13695 PF00665 Integrase core domain LFERR_RS13715 PF05598 LFERR_RS13715 LFERR_RS13720 PF01548 LFERR_RS13720 LFERR_RS13720 PF02371 LFERR_RS13720 LFERR_RS13725 PF01609 Transposase DDE domain LFERR_RS13730 PF01609 Transposase DDE domain LFERR_RS13730 PF05598 LFERR_RS13730 LFERR_RS13740 PF04471 Restriction endonuclease LFERR_RS13740 PF14338 LFERR_RS13740 LFERR_RS13770 PF04851 Type III restriction enzyme, res subunit LFERR_RS13775 PF01555 DNA methylase LFERR_RS13785 PF04326 Divergent AAA domain LFERR_RS13785 PF13749 ATP-dependent DNA helicase recG C-terminal LFERR_RS13810 PF06527 LFERR_RS13810 LFERR_RS13810 PF15978 LFERR_RS13810 LFERR_RS13815 PF13401 AAA domain LFERR_RS13820 PF00665 Integrase core domain LFERR_RS13820 PF09299 Mu transposase, C-terminal LFERR_RS13825 PF08721 TnsA endonuclease C terminal LFERR_RS13825 PF08722 TnsA endonuclease N terminal LFERR_RS13830 PF01380 SIS domain LFERR_RS13830 PF13522 Glutamine amidotransferase domain LFERR_RS13835 PF00132 Bacterial transferase hexapeptide (six repeats) LFERR_RS13835 PF12804 MobA-like NTP transferase domain LFERR_RS13840 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LFERR_RS13840 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFERR_RS13845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFERR_RS13845 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFERR_RS13850 PF00231 ATP synthase LFERR_RS13855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFERR_RS13855 PF00306 ATP synthase alpha/beta chain, C terminal domain LFERR_RS13855 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFERR_RS13860 PF00213 ATP synthase delta (OSCP) subunit LFERR_RS13865 PF00430 ATP synthase B/B' CF(0) LFERR_RS13870 PF00137 ATP synthase subunit C LFERR_RS13875 PF00119 ATP synthase A chain LFERR_RS13885 PF02195 ParB-like nuclease domain LFERR_RS13890 PF13614 AAA domain LFERR_RS13895 PF02527 rRNA small subunit methyltransferase G LFERR_RS13900 PF01134 Glucose inhibited division protein A LFERR_RS13900 PF13932 GidA associated domain 3 LFERR_RS13905 PF04170 NlpE N-terminal domain LFERR_RS13910 PF13649 Methyltransferase domain LFERR_RS13915 PF00994 Probable molybdopterin binding domain LFERR_RS13920 PF01544 CorA-like Mg2+ transporter protein LFERR_RS13925 PF01544 CorA-like Mg2+ transporter protein LFERR_RS13930 PF01544 CorA-like Mg2+ transporter protein LFERR_RS13935 PF01544 CorA-like Mg2+ transporter protein LFERR_RS13940 PF03747 ADP-ribosylglycohydrolase LFERR_RS13950 PF02678 Pirin LFERR_RS13950 PF05726 Pirin C-terminal cupin domain LFERR_RS13960 PF00593 TonB dependent receptor LFERR_RS13960 PF07715 TonB-dependent Receptor Plug Domain LFERR_RS13965 PF04185 Phosphoesterase family LFERR_RS13985 PF01061 LFERR_RS13985 LFERR_RS13990 PF00005 ABC transporter LFERR_RS13995 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LFERR_RS14005 PF03232 LFERR_RS14005 LFERR_RS14010 PF02082 Transcriptional regulator LFERR_RS14015 PF02566 OsmC-like protein LFERR_RS14020 PF00218 Indole-3-glycerol phosphate synthase LFERR_RS14025 PF00591 Glycosyl transferase family, a/b domain LFERR_RS14025 PF02885 Glycosyl transferase family, helical bundle domain LFERR_RS14030 PF00117 Glutamine amidotransferase class-I LFERR_RS14035 PF00425 chorismate binding enzyme LFERR_RS14035 PF04715 Anthranilate synthase component I, N terminal region LFERR_RS14040 PF13419 Haloacid dehalogenase-like hydrolase LFERR_RS14045 PF00834 Ribulose-phosphate 3 epimerase family LFERR_RS14050 PF01116 Fructose-bisphosphate aldolase class-II LFERR_RS14055 PF00224 Pyruvate kinase, barrel domain LFERR_RS14055 PF02887 Pyruvate kinase, alpha/beta domain LFERR_RS14060 PF00162 Phosphoglycerate kinase LFERR_RS14065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFERR_RS14065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFERR_RS14070 PF00456 Transketolase, thiamine diphosphate binding domain LFERR_RS14070 PF02779 Transketolase, pyrimidine binding domain LFERR_RS14070 PF02780 Transketolase, C-terminal domain LFERR_RS14075 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LFERR_RS14080 PF00459 Inositol monophosphatase family LFERR_RS14090 PF04452 RNA methyltransferase LFERR_RS14095 PF02401 LytB protein LFERR_RS14100 PF02646 LFERR_RS14100 LFERR_RS14105 PF01741 Large-conductance mechanosensitive channel, MscL LFERR_RS14115 PF00873 AcrB/AcrD/AcrF family LFERR_RS14120 PF16576 LFERR_RS14120 LFERR_RS14125 PF02321 Outer membrane efflux protein LFERR_RS14130 PF02639 LFERR_RS14130 LFERR_RS14135 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFERR_RS14140 PF13470 LFERR_RS14140 LFERR_RS14155 PF07813 LTXXQ motif family protein LFERR_RS14160 PF00072 Response regulator receiver domain LFERR_RS14160 PF00486 Transcriptional regulatory protein, C terminal LFERR_RS14165 PF00512 His Kinase A (phospho-acceptor) domain LFERR_RS14165 PF00672 HAMP domain LFERR_RS14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFERR_RS14175 PF00206 Lyase LFERR_RS14175 PF14698 Argininosuccinate lyase C-terminal LFERR_RS14185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFERR_RS14185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFERR_RS14190 PF01161 Phosphatidylethanolamine-binding protein LFERR_RS14195 PF01750 Hydrogenase maturation protease LFERR_RS14200 PF04809 HupH hydrogenase expression protein, C-terminal conserved region LFERR_RS14205 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFERR_RS14205 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFERR_RS14215 PF02754 LFERR_RS14215 LFERR_RS14215 PF13534 4Fe-4S dicluster domain LFERR_RS14220 PF00374 Nickel-dependent hydrogenase LFERR_RS14225 PF01155 Hydrogenase expression/synthesis hypA family LFERR_RS14230 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFERR_RS14235 PF01455 HupF/HypC family LFERR_RS14240 PF01924 Hydrogenase formation hypA family LFERR_RS14245 PF16363 LFERR_RS14245 LFERR_RS14250 PF16363 LFERR_RS14250 LFERR_RS14255 PF00483 Nucleotidyl transferase LFERR_RS14255 PF01050 Mannose-6-phosphate isomerase LFERR_RS14260 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LFERR_RS14265 PF00483 Nucleotidyl transferase LFERR_RS14270 PF00083 Sugar (and other) transporter LFERR_RS14275 PF13103 TonB C terminal LFERR_RS14280 PF00490 Delta-aminolevulinic acid dehydratase LFERR_RS14285 PF02602 Uroporphyrinogen-III synthase HemD LFERR_RS14290 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LFERR_RS14290 PF03900 Porphobilinogen deaminase, C-terminal domain LFERR_RS14295 PF12836 Helix-hairpin-helix motif LFERR_RS14300 PF01230 HIT domain LFERR_RS14305 PF00202 Aminotransferase class-III LFERR_RS14310 PF02581 Thiamine monophosphate synthase/TENI LFERR_RS14315 PF08543 Phosphomethylpyrimidine kinase LFERR_RS14320 PF00106 short chain dehydrogenase LFERR_RS14335 PF13808 LFERR_RS14335 LFERR_RS14335 PF14236 LFERR_RS14335 LFERR_RS14340 PF01381 Helix-turn-helix LFERR_RS14345 PF14549 DNA-binding transcriptional regulator Cro LFERR_RS14350 PF13808 LFERR_RS14350 LFERR_RS14350 PF14236 LFERR_RS14350 LFERR_RS14365 PF13808 LFERR_RS14365 LFERR_RS14365 PF14236 LFERR_RS14365 LFERR_RS14380 PF08401 LFERR_RS14380 LFERR_RS14380 PF11171 LFERR_RS14380 LFERR_RS14380 PF12083 LFERR_RS14380 LFERR_RS14385 PF13676 TIR domain LFERR_RS14390 PF13808 LFERR_RS14390 LFERR_RS14390 PF14236 LFERR_RS14390 LFERR_RS14405 PF13808 LFERR_RS14405 LFERR_RS14405 PF14236 LFERR_RS14405 LFERR_RS14420 PF13808 LFERR_RS14420 LFERR_RS14420 PF14236 LFERR_RS14420 LFERR_RS14430 PF13808 LFERR_RS14430 LFERR_RS14430 PF14236 LFERR_RS14430 LFERR_RS14440 PF02567 Phenazine biosynthesis-like protein LFERR_RS14455 PF13808 LFERR_RS14455 LFERR_RS14455 PF14236 LFERR_RS14455 LFERR_RS14460 PF13808 LFERR_RS14460 LFERR_RS14460 PF14236 LFERR_RS14460 LFERR_RS14470 PF01381 Helix-turn-helix LFERR_RS14475 PF14549 DNA-binding transcriptional regulator Cro LFERR_RS14490 PF00563 EAL domain LFERR_RS14490 PF00990 GGDEF domain LFERR_RS14490 PF08448 PAS fold LFERR_RS14490 PF13185 GAF domain LFERR_RS14490 PF13426 PAS domain LFERR_RS14495 PF01844 HNH endonuclease LFERR_RS14505 PF13808 LFERR_RS14505 LFERR_RS14505 PF14236 LFERR_RS14505 LFERR_RS14510 PF13808 LFERR_RS14510 LFERR_RS14510 PF14236 LFERR_RS14510 LFERR_RS14520 PF13808 LFERR_RS14520 LFERR_RS14520 PF14236 LFERR_RS14520 LFERR_RS14530 PF13808 LFERR_RS14530 LFERR_RS14530 PF14236 LFERR_RS14530 LFERR_RS14540 PF11939 Protein of unknown function (DUF3457) LFERR_RS14550 PF13808 LFERR_RS14550 LFERR_RS14550 PF14236 LFERR_RS14550 LFERR_RS14565 PF13808 LFERR_RS14565 LFERR_RS14565 PF14236 LFERR_RS14565 LFERR_RS14570 PF13808 LFERR_RS14570 LFERR_RS14570 PF14236 LFERR_RS14570 LFERR_RS14580 PF13808 LFERR_RS14580 LFERR_RS14580 PF14236 LFERR_RS14580 LFERR_RS14595 PF13808 LFERR_RS14595 LFERR_RS14595 PF14236 LFERR_RS14595 LFERR_RS14600 PF13808 LFERR_RS14600 LFERR_RS14600 PF14236 LFERR_RS14600 LFERR_RS14615 PF13808 LFERR_RS14615 LFERR_RS14615 PF14236 LFERR_RS14615 LFERR_RS14620 PF07027 LFERR_RS14620 LFERR_RS14625 PF00665 Integrase core domain LFERR_RS14635 PF13808 LFERR_RS14635 LFERR_RS14635 PF14236 LFERR_RS14635 LFERR_RS14640 PF00534 Glycosyl transferases group 1 LFERR_RS14650 PF13808 LFERR_RS14650 LFERR_RS14650 PF14236 LFERR_RS14650 LFERR_RS14655 PF13808 LFERR_RS14655 LFERR_RS14655 PF14236 LFERR_RS14655 LFERR_RS14665 PF13808 LFERR_RS14665 LFERR_RS14665 PF14236 LFERR_RS14665