LFERR_RS00015 SM00382 ATPases associated with a variety of cellular activities LFERR_RS00015 SM00760 Bacterial dnaA protein helix-turn-helix domain LFERR_RS00020 SM00480 DNA polymerase III beta subunit LFERR_RS00030 SM00387 Histidine kinase-like ATPases LFERR_RS00030 SM00433 TopoisomeraseII LFERR_RS00040 SM00972 Spore Coat Protein U domain LFERR_RS00055 SM00972 Spore Coat Protein U domain LFERR_RS00090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LFERR_RS00090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LFERR_RS00090 SM00493 LFERR_RS00090 LFERR_RS00105 SM00257 Lysin motif LFERR_RS00130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LFERR_RS00130 SM00387 Histidine kinase-like ATPases LFERR_RS00130 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS00135 SM00448 cheY-homologous receiver domain LFERR_RS00140 SM00387 Histidine kinase-like ATPases LFERR_RS00140 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS00145 SM00382 ATPases associated with a variety of cellular activities LFERR_RS00145 SM00448 cheY-homologous receiver domain LFERR_RS00150 SM00564 beta-propeller repeat LFERR_RS00170 SM01234 LFERR_RS00170 LFERR_RS00185 SM00382 ATPases associated with a variety of cellular activities LFERR_RS00230 SM00450 Rhodanese Homology Domain LFERR_RS00235 SM00450 Rhodanese Homology Domain LFERR_RS00280 SM00834 Putative regulatory protein LFERR_RS00295 SM00563 Phosphate acyltransferases LFERR_RS00310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LFERR_RS00315 SM00382 ATPases associated with a variety of cellular activities LFERR_RS00510 SM00382 ATPases associated with a variety of cellular activities LFERR_RS00530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LFERR_RS00530 SM00387 Histidine kinase-like ATPases LFERR_RS00530 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS00535 SM00448 cheY-homologous receiver domain LFERR_RS00535 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS00575 SM00671 Sel1-like repeats. LFERR_RS00590 SM00419 helix_turn_helix, cAMP Regulatory protein LFERR_RS00605 SM00028 Tetratricopeptide repeats LFERR_RS00610 SM01207 LFERR_RS00610 LFERR_RS00615 SM00905 Dihydroneopterin aldolase LFERR_RS00620 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS00625 SM00857 Resolvase, N terminal domain LFERR_RS00665 SM00382 ATPases associated with a variety of cellular activities LFERR_RS00770 SM00422 helix_turn_helix, mercury resistance LFERR_RS00795 SM00422 helix_turn_helix, mercury resistance LFERR_RS00875 SM00530 Helix-turn-helix XRE-family like proteins LFERR_RS00900 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS00920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS00970 SM00028 Tetratricopeptide repeats LFERR_RS00995 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS01045 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01095 SM00487 DEAD-like helicases superfamily LFERR_RS01120 SM00563 Phosphate acyltransferases LFERR_RS01200 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01230 SM01152 LFERR_RS01230 LFERR_RS01320 SM00470 ParB-like nuclease domain LFERR_RS01370 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LFERR_RS01370 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LFERR_RS01370 SM00493 LFERR_RS01370 LFERR_RS01380 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain LFERR_RS01470 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS01555 SM00450 Rhodanese Homology Domain LFERR_RS01565 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01615 SM00855 Phosphoglycerate mutase family LFERR_RS01630 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01655 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01670 SM00507 HNH nucleases LFERR_RS01675 SM00650 Ribosomal RNA adenine dimethylases LFERR_RS01690 SM00836 DALR anticodon binding domain LFERR_RS01690 SM01016 Arginyl tRNA synthetase N terminal dom LFERR_RS01755 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01760 SM00387 Histidine kinase-like ATPases LFERR_RS01760 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS01765 SM00382 ATPases associated with a variety of cellular activities LFERR_RS01765 SM00448 cheY-homologous receiver domain LFERR_RS01815 SM00878 Biotin carboxylase C-terminal domain LFERR_RS01840 SM00864 Tubulin/FtsZ family, GTPase domain LFERR_RS01840 SM00865 Tubulin/FtsZ family, C-terminal domain LFERR_RS01845 SM00842 Cell division protein FtsA LFERR_RS01945 SM00957 SecA DEAD-like domain LFERR_RS01945 SM00958 SecA preprotein cross-linking domain LFERR_RS02075 SM00479 LFERR_RS02075 LFERR_RS02120 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS02120 SM00876 Biotin and Thiamin Synthesis associated domain LFERR_RS02125 SM01152 LFERR_RS02125 LFERR_RS02145 SM00382 ATPases associated with a variety of cellular activities LFERR_RS02170 SM00849 Metallo-beta-lactamase superfamily LFERR_RS02175 SM00100 Cyclic nucleotide-monophosphate binding domain LFERR_RS02175 SM00419 helix_turn_helix, cAMP Regulatory protein LFERR_RS02185 SM01001 AIR carboxylase LFERR_RS02215 SM00155 Phospholipase D. Active site motifs. LFERR_RS02235 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LFERR_RS02260 SM00947 Carbonic anhydrase LFERR_RS02335 SM00671 Sel1-like repeats. LFERR_RS02385 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LFERR_RS02385 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LFERR_RS02390 SM00649 Ribosomal protein L11/L12 LFERR_RS02415 SM00663 RNA polymerase I subunit A N-terminus LFERR_RS02430 SM00838 Elongation factor G C-terminus LFERR_RS02430 SM00889 Elongation factor G, domain IV LFERR_RS02440 SM01403 LFERR_RS02440 LFERR_RS02470 SM00322 K homology RNA-binding domain LFERR_RS02490 SM01374 LFERR_RS02490 LFERR_RS02495 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LFERR_RS02545 SM00316 Ribosomal protein S1-like RNA-binding domain LFERR_RS02560 SM00363 S4 RNA-binding domain LFERR_RS02560 SM01390 LFERR_RS02560 LFERR_RS02565 SM00662 RNA polymerases D LFERR_RS02595 SM00014 Acid phosphatase homologues LFERR_RS02640 SM00487 DEAD-like helicases superfamily LFERR_RS02640 SM00490 helicase superfamily c-terminal domain LFERR_RS02640 SM00982 LFERR_RS02640 LFERR_RS02640 SM01058 CarD-like/TRCF domain LFERR_RS02660 SM00422 helix_turn_helix, mercury resistance LFERR_RS02665 SM00463 Small MutS-related domain LFERR_RS02675 SM00843 LFERR_RS02675 LFERR_RS02690 SM00382 ATPases associated with a variety of cellular activities LFERR_RS02745 SM00316 Ribosomal protein S1-like RNA-binding domain LFERR_RS02765 SM01387 LFERR_RS02765 LFERR_RS02770 SM00316 Ribosomal protein S1-like RNA-binding domain LFERR_RS02770 SM00322 K homology RNA-binding domain LFERR_RS02780 SM00849 Metallo-beta-lactamase superfamily LFERR_RS02795 SM00479 LFERR_RS02795 LFERR_RS02800 SM00960 Roadblock/LC7 domain LFERR_RS02840 SM00671 Sel1-like repeats. LFERR_RS02880 SM00257 Lysin motif LFERR_RS02895 SM01329 LFERR_RS02895 LFERR_RS02910 SM00881 CoA binding domain LFERR_RS02920 SM00938 Nitrogen regulatory protein P-II LFERR_RS02930 SM00363 S4 RNA-binding domain LFERR_RS02955 SM01007 Class II Aldolase and Adducin N-terminal domain LFERR_RS03005 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03005 SM00448 cheY-homologous receiver domain LFERR_RS03015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LFERR_RS03015 SM00387 Histidine kinase-like ATPases LFERR_RS03015 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS03070 SM00867 YceI-like domain LFERR_RS03080 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LFERR_RS03080 SM01232 LFERR_RS03080 LFERR_RS03085 SM00450 Rhodanese Homology Domain LFERR_RS03095 SM01230 LFERR_RS03095 LFERR_RS03150 SM00966 SpoVT / AbrB like domain LFERR_RS03160 SM00937 LFERR_RS03160 LFERR_RS03175 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03310 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03335 SM00986 Uracil DNA glycosylase superfamily LFERR_RS03335 SM00987 UreE urease accessory protein, C-terminal domain LFERR_RS03345 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03345 SM01086 C-terminal, D2-small domain, of ClpB protein LFERR_RS03365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LFERR_RS03365 SM00245 tail specific protease LFERR_RS03390 SM00450 Rhodanese Homology Domain LFERR_RS03410 SM00996 S-adenosyl-L-homocysteine hydrolase LFERR_RS03410 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LFERR_RS03425 SM00014 Acid phosphatase homologues LFERR_RS03450 SM00883 Chaperonin 10 Kd subunit LFERR_RS03490 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03515 SM00904 Riboflavin kinase LFERR_RS03540 SM00072 Guanylate kinase homologues. LFERR_RS03545 SM01409 LFERR_RS03545 LFERR_RS03550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LFERR_RS03550 SM00954 Region found in RelA / SpoT proteins LFERR_RS03565 SM00487 DEAD-like helicases superfamily LFERR_RS03565 SM00490 helicase superfamily c-terminal domain LFERR_RS03670 SM00487 DEAD-like helicases superfamily LFERR_RS03670 SM00490 helicase superfamily c-terminal domain LFERR_RS03675 SM00357 Cold shock protein domain LFERR_RS03680 SM00487 DEAD-like helicases superfamily LFERR_RS03680 SM00490 helicase superfamily c-terminal domain LFERR_RS03705 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS03720 SM00116 Domain in cystathionine beta-synthase and other proteins. LFERR_RS03720 SM01091 Transporter associated domain LFERR_RS03740 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03805 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03810 SM00984 UDP binding domain LFERR_RS03820 SM00855 Phosphoglycerate mutase family LFERR_RS03830 SM00530 Helix-turn-helix XRE-family like proteins LFERR_RS03915 SM00851 MGS-like domain LFERR_RS03915 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LFERR_RS03920 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain LFERR_RS03955 SM00382 ATPases associated with a variety of cellular activities LFERR_RS03965 SM00769 Water Stress and Hypersensitive response LFERR_RS03995 SM00382 ATPases associated with a variety of cellular activities LFERR_RS04010 SM00357 Cold shock protein domain LFERR_RS04010 SM00382 ATPases associated with a variety of cellular activities LFERR_RS04010 SM00959 Rho termination factor, N-terminal domain LFERR_RS04020 SM00919 Malic enzyme, NAD binding domain LFERR_RS04020 SM01274 LFERR_RS04020 LFERR_RS04060 SM00382 ATPases associated with a variety of cellular activities LFERR_RS04135 SM00487 DEAD-like helicases superfamily LFERR_RS04185 SM00382 ATPases associated with a variety of cellular activities LFERR_RS04215 SM00382 ATPases associated with a variety of cellular activities LFERR_RS04350 SM00563 Phosphate acyltransferases LFERR_RS04370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LFERR_RS04390 SM00965 Secretin and TonB N terminus short domain LFERR_RS04430 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LFERR_RS04430 SM00534 ATPase domain of DNA mismatch repair MUTS family LFERR_RS04490 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LFERR_RS04490 SM00292 breast cancer carboxy-terminal domain LFERR_RS04490 SM00532 Ligase N family LFERR_RS04560 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LFERR_RS04570 SM01092 CO dehydrogenase flavoprotein C-terminal domain LFERR_RS04635 SM00563 Phosphate acyltransferases LFERR_RS04650 SM00822 LFERR_RS04650 LFERR_RS04665 SM00825 Beta-ketoacyl synthase LFERR_RS04730 SM01092 CO dehydrogenase flavoprotein C-terminal domain LFERR_RS04735 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LFERR_RS04770 SM00831 Cation transporter/ATPase, N-terminus LFERR_RS04815 SM00487 DEAD-like helicases superfamily LFERR_RS04830 SM00487 DEAD-like helicases superfamily LFERR_RS04830 SM00490 helicase superfamily c-terminal domain LFERR_RS04835 SM00829 Enoylreductase LFERR_RS04850 SM01192 LFERR_RS04850 LFERR_RS04850 SM01193 LFERR_RS04850 LFERR_RS04860 SM00841 Elongation factor P, C-terminal LFERR_RS04860 SM01185 LFERR_RS04860 LFERR_RS04870 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LFERR_RS04870 SM00465 GIY-YIG type nucleases (URI domain) LFERR_RS04890 SM00100 Cyclic nucleotide-monophosphate binding domain LFERR_RS04890 SM00419 helix_turn_helix, cAMP Regulatory protein LFERR_RS04900 SM01353 LFERR_RS04900 LFERR_RS04970 SM00382 ATPases associated with a variety of cellular activities LFERR_RS04970 SM00464 Found in ATP-dependent protease La (LON) LFERR_RS05070 SM00434 DNA Topoisomerase IV LFERR_RS05085 SM00830 Chorismate mutase type II LFERR_RS05115 SM00316 Ribosomal protein S1-like RNA-binding domain LFERR_RS05120 SM00411 bacterial (prokaryotic) histone like domain LFERR_RS05130 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LFERR_RS05150 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05150 SM00994 ClpX C4-type zinc finger LFERR_RS05150 SM01086 C-terminal, D2-small domain, of ClpB protein LFERR_RS05155 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05155 SM00464 Found in ATP-dependent protease La (LON) LFERR_RS05160 SM00411 bacterial (prokaryotic) histone like domain LFERR_RS05180 SM00014 Acid phosphatase homologues LFERR_RS05210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LFERR_RS05245 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05255 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LFERR_RS05295 SM00487 DEAD-like helicases superfamily LFERR_RS05295 SM00490 helicase superfamily c-terminal domain LFERR_RS05310 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05350 SM00849 Metallo-beta-lactamase superfamily LFERR_RS05355 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05455 SM00960 Roadblock/LC7 domain LFERR_RS05480 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05500 SM00481 DNA polymerase alpha chain like domain LFERR_RS05520 SM00967 RNA 2'-O ribose methyltransferase substrate binding LFERR_RS05530 SM00849 Metallo-beta-lactamase superfamily LFERR_RS05540 SM00897 FIST N domain LFERR_RS05540 SM01204 LFERR_RS05540 LFERR_RS05545 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05550 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05585 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LFERR_RS05590 SM00838 Elongation factor G C-terminus LFERR_RS05605 SM00358 Double-stranded RNA binding motif LFERR_RS05605 SM00535 Ribonuclease III family LFERR_RS05645 SM00984 UDP binding domain LFERR_RS05735 SM00422 helix_turn_helix, mercury resistance LFERR_RS05740 SM00487 DEAD-like helicases superfamily LFERR_RS05740 SM00490 helicase superfamily c-terminal domain LFERR_RS05745 SM00448 cheY-homologous receiver domain LFERR_RS05745 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS05750 SM00387 Histidine kinase-like ATPases LFERR_RS05750 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS05770 SM00382 ATPases associated with a variety of cellular activities LFERR_RS05825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LFERR_RS05835 SM00935 Outer membrane protein (OmpH-like) LFERR_RS05875 SM00481 DNA polymerase alpha chain like domain LFERR_RS05885 SM00977 TilS substrate C-terminal domain LFERR_RS05915 SM00670 Large family of predicted nucleotide-binding domains LFERR_RS05965 SM00893 Electron transfer flavoprotein domain LFERR_RS05970 SM00893 Electron transfer flavoprotein domain LFERR_RS06015 SM00382 ATPases associated with a variety of cellular activities LFERR_RS06070 SM00382 ATPases associated with a variety of cellular activities LFERR_RS06080 SM00834 Putative regulatory protein LFERR_RS06085 SM00248 ankyrin repeats LFERR_RS06085 SM00450 Rhodanese Homology Domain LFERR_RS06205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LFERR_RS06205 SM00382 ATPases associated with a variety of cellular activities LFERR_RS06375 SM00382 ATPases associated with a variety of cellular activities LFERR_RS06405 SM00974 LFERR_RS06405 LFERR_RS06440 SM00411 bacterial (prokaryotic) histone like domain LFERR_RS06445 SM00411 bacterial (prokaryotic) histone like domain LFERR_RS06470 SM00563 Phosphate acyltransferases LFERR_RS06585 SM00530 Helix-turn-helix XRE-family like proteins LFERR_RS06625 SM00382 ATPases associated with a variety of cellular activities LFERR_RS06660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LFERR_RS06710 SM00100 Cyclic nucleotide-monophosphate binding domain LFERR_RS06710 SM00419 helix_turn_helix, cAMP Regulatory protein LFERR_RS06750 SM00861 Transketolase, pyrimidine binding domain LFERR_RS06755 SM00346 helix_turn_helix isocitrate lyase regulation LFERR_RS06805 SM00327 von Willebrand factor (vWF) type A domain LFERR_RS06830 SM00877 LFERR_RS06830 LFERR_RS06835 SM00877 LFERR_RS06835 LFERR_RS06840 SM00877 LFERR_RS06840 LFERR_RS06865 SM00961 Ribulose bisphosphate carboxylase, small chain LFERR_RS06950 SM00052 Putative diguanylate phosphodiesterase LFERR_RS06960 SM00052 Putative diguanylate phosphodiesterase LFERR_RS06960 SM00267 diguanylate cyclase LFERR_RS06990 SM00470 ParB-like nuclease domain LFERR_RS07015 SM00052 Putative diguanylate phosphodiesterase LFERR_RS07015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LFERR_RS07015 SM00091 PAS domain LFERR_RS07015 SM00267 diguanylate cyclase LFERR_RS07060 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LFERR_RS07060 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LFERR_RS07060 SM00493 LFERR_RS07060 LFERR_RS07100 SM00155 Phospholipase D. Active site motifs. LFERR_RS07115 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LFERR_RS07115 SM00534 ATPase domain of DNA mismatch repair MUTS family LFERR_RS07140 SM00479 LFERR_RS07140 LFERR_RS07150 SM00463 Small MutS-related domain LFERR_RS07195 SM00116 Domain in cystathionine beta-synthase and other proteins. LFERR_RS07195 SM01240 LFERR_RS07195 LFERR_RS07215 SM00966 SpoVT / AbrB like domain LFERR_RS07225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LFERR_RS07275 SM00363 S4 RNA-binding domain LFERR_RS07280 SM00478 endonuclease III LFERR_RS07310 SM01192 LFERR_RS07310 LFERR_RS07320 SM01133 LFERR_RS07320 LFERR_RS07375 SM00861 Transketolase, pyrimidine binding domain LFERR_RS07510 SM00382 ATPases associated with a variety of cellular activities LFERR_RS07535 SM00861 Transketolase, pyrimidine binding domain LFERR_RS07560 SM00478 endonuclease III LFERR_RS07670 SM00880 LFERR_RS07670 LFERR_RS07670 SM01118 LFERR_RS07670 LFERR_RS07730 SM00244 prohibitin homologues LFERR_RS07735 SM00244 prohibitin homologues LFERR_RS07745 SM00788 Adenylosuccinate synthetase LFERR_RS07755 SM00316 Ribosomal protein S1-like RNA-binding domain LFERR_RS07755 SM00357 Cold shock protein domain LFERR_RS07755 SM00955 LFERR_RS07755 LFERR_RS07770 SM00852 Probable molybdopterin binding domain LFERR_RS07835 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LFERR_RS07840 SM00822 LFERR_RS07840 LFERR_RS07845 SM00823 Phosphopantetheine attachment site LFERR_RS07850 SM00825 Beta-ketoacyl synthase LFERR_RS07885 SM00382 ATPases associated with a variety of cellular activities LFERR_RS07895 SM00493 LFERR_RS07895 LFERR_RS07915 SM00116 Domain in cystathionine beta-synthase and other proteins. LFERR_RS07925 SM00853 MutL C terminal dimerisation domain LFERR_RS07925 SM01340 LFERR_RS07925 LFERR_RS07935 SM00562 LFERR_RS07935 LFERR_RS07945 SM00028 Tetratricopeptide repeats LFERR_RS07950 SM00530 Helix-turn-helix XRE-family like proteins LFERR_RS07970 SM00564 beta-propeller repeat LFERR_RS08135 SM00382 ATPases associated with a variety of cellular activities LFERR_RS08135 SM01086 C-terminal, D2-small domain, of ClpB protein LFERR_RS08155 SM00861 Transketolase, pyrimidine binding domain LFERR_RS08190 SM00564 beta-propeller repeat LFERR_RS08210 SM00831 Cation transporter/ATPase, N-terminus LFERR_RS08215 SM00917 LeuA allosteric (dimerisation) domain LFERR_RS08220 SM00344 helix_turn_helix ASNC type LFERR_RS08245 SM00421 helix_turn_helix, Lux Regulon LFERR_RS08310 SM00347 helix_turn_helix multiple antibiotic resistance protein LFERR_RS08365 SM01350 LFERR_RS08365 LFERR_RS08375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS08385 SM00434 DNA Topoisomerase IV LFERR_RS08390 SM00387 Histidine kinase-like ATPases LFERR_RS08390 SM00433 TopoisomeraseII LFERR_RS08395 SM00387 Histidine kinase-like ATPases LFERR_RS08395 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS08400 SM00448 cheY-homologous receiver domain LFERR_RS08400 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS08505 SM01323 LFERR_RS08505 LFERR_RS08520 SM01091 Transporter associated domain LFERR_RS08580 SM00859 Semialdehyde dehydrogenase, NAD binding domain LFERR_RS08585 SM01329 LFERR_RS08585 LFERR_RS08600 SM00852 Probable molybdopterin binding domain LFERR_RS08615 SM00642 Alpha-amylase domain LFERR_RS08620 SM00642 Alpha-amylase domain LFERR_RS08720 SM00382 ATPases associated with a variety of cellular activities LFERR_RS08750 SM00845 GatB domain LFERR_RS08800 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS08890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LFERR_RS08935 SM00530 Helix-turn-helix XRE-family like proteins LFERR_RS08980 SM00327 von Willebrand factor (vWF) type A domain LFERR_RS09025 SM00382 ATPases associated with a variety of cellular activities LFERR_RS09060 SM00363 S4 RNA-binding domain LFERR_RS09070 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LFERR_RS09110 SM00347 helix_turn_helix multiple antibiotic resistance protein LFERR_RS09130 SM00382 ATPases associated with a variety of cellular activities LFERR_RS09150 SM00341 Helicase and RNase D C-terminal LFERR_RS09150 SM00487 DEAD-like helicases superfamily LFERR_RS09150 SM00490 helicase superfamily c-terminal domain LFERR_RS09150 SM00956 LFERR_RS09150 LFERR_RS09155 SM01219 LFERR_RS09155 LFERR_RS09265 SM00363 S4 RNA-binding domain LFERR_RS09270 SM00316 Ribosomal protein S1-like RNA-binding domain LFERR_RS09275 SM00840 LFERR_RS09275 LFERR_RS09315 SM00448 cheY-homologous receiver domain LFERR_RS09315 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS09320 SM00387 Histidine kinase-like ATPases LFERR_RS09320 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS09360 SM00938 Nitrogen regulatory protein P-II LFERR_RS09400 SM00564 beta-propeller repeat LFERR_RS09405 SM01359 LFERR_RS09405 LFERR_RS09405 SM01360 LFERR_RS09405 LFERR_RS09415 SM00960 Roadblock/LC7 domain LFERR_RS09420 SM00849 Metallo-beta-lactamase superfamily LFERR_RS09440 SM00798 AICARFT/IMPCHase bienzyme LFERR_RS09440 SM00851 MGS-like domain LFERR_RS09445 SM01209 LFERR_RS09445 LFERR_RS09445 SM01210 LFERR_RS09445 LFERR_RS09490 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS09545 SM00382 ATPases associated with a variety of cellular activities LFERR_RS09550 SM00382 ATPases associated with a variety of cellular activities LFERR_RS09570 SM00345 helix_turn_helix gluconate operon transcriptional repressor LFERR_RS09570 SM00866 LFERR_RS09570 LFERR_RS09645 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS09675 SM00855 Phosphoglycerate mutase family LFERR_RS09690 SM00387 Histidine kinase-like ATPases LFERR_RS09690 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS09695 SM00448 cheY-homologous receiver domain LFERR_RS09695 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS09700 SM00479 LFERR_RS09700 LFERR_RS09735 SM00831 Cation transporter/ATPase, N-terminus LFERR_RS09765 SM00400 zinc finger LFERR_RS09765 SM00493 LFERR_RS09765 LFERR_RS09770 SM00463 Small MutS-related domain LFERR_RS09770 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LFERR_RS09770 SM00534 ATPase domain of DNA mismatch repair MUTS family LFERR_RS09800 SM00100 Cyclic nucleotide-monophosphate binding domain LFERR_RS09805 SM00464 Found in ATP-dependent protease La (LON) LFERR_RS09810 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS09850 SM01211 LFERR_RS09850 LFERR_RS09860 SM00998 Adenylosuccinate lyase C-terminus LFERR_RS09870 SM01130 LFERR_RS09870 LFERR_RS09885 SM00646 LFERR_RS09885 LFERR_RS09900 SM00450 Rhodanese Homology Domain LFERR_RS09925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS09950 SM00487 DEAD-like helicases superfamily LFERR_RS09950 SM00490 helicase superfamily c-terminal domain LFERR_RS09975 SM00487 DEAD-like helicases superfamily LFERR_RS10055 SM00382 ATPases associated with a variety of cellular activities LFERR_RS10115 SM00487 DEAD-like helicases superfamily LFERR_RS10135 SM00382 ATPases associated with a variety of cellular activities LFERR_RS10170 SM00422 helix_turn_helix, mercury resistance LFERR_RS10295 SM01126 LFERR_RS10295 LFERR_RS10340 SM00938 Nitrogen regulatory protein P-II LFERR_RS10435 SM00422 helix_turn_helix, mercury resistance LFERR_RS10580 SM00422 helix_turn_helix, mercury resistance LFERR_RS10590 SM00671 Sel1-like repeats. LFERR_RS10610 SM00487 DEAD-like helicases superfamily LFERR_RS10610 SM00491 LFERR_RS10610 LFERR_RS10630 SM00899 LFERR_RS10630 LFERR_RS10690 SM00327 von Willebrand factor (vWF) type A domain LFERR_RS10730 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS10745 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS10820 SM00450 Rhodanese Homology Domain LFERR_RS10825 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS10865 SM00936 Penicillin-binding protein 5, C-terminal domain LFERR_RS10880 SM00729 Elongator protein 3, MiaB family, Radical SAM LFERR_RS10920 SM00960 Roadblock/LC7 domain LFERR_RS10940 SM00563 Phosphate acyltransferases LFERR_RS10975 SM00644 LFERR_RS10975 LFERR_RS11005 SM00917 LeuA allosteric (dimerisation) domain LFERR_RS11010 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11040 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11055 SM00422 helix_turn_helix, mercury resistance LFERR_RS11060 SM00411 bacterial (prokaryotic) histone like domain LFERR_RS11065 SM00873 B3/4 domain LFERR_RS11065 SM00874 tRNA synthetase B5 domain LFERR_RS11065 SM00896 Ferredoxin-fold anticodon binding domain LFERR_RS11090 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LFERR_RS11140 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LFERR_RS11140 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LFERR_RS11145 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFERR_RS11200 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS11240 SM00849 Metallo-beta-lactamase superfamily LFERR_RS11330 SM00271 DnaJ molecular chaperone homology domain LFERR_RS11400 SM00849 Metallo-beta-lactamase superfamily LFERR_RS11400 SM01027 Beta-Casp domain LFERR_RS11410 SM00478 endonuclease III LFERR_RS11415 SM00028 Tetratricopeptide repeats LFERR_RS11430 SM00671 Sel1-like repeats. LFERR_RS11460 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11470 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11515 SM00858 LFERR_RS11515 LFERR_RS11570 SM00028 Tetratricopeptide repeats LFERR_RS11675 SM01103 LFERR_RS11675 LFERR_RS11725 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11725 SM01086 C-terminal, D2-small domain, of ClpB protein LFERR_RS11745 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11750 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11750 SM00962 SRP54-type protein, GTPase domain LFERR_RS11750 SM00963 SRP54-type protein, helical bundle domain LFERR_RS11775 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LFERR_RS11775 SM01232 LFERR_RS11775 LFERR_RS11785 SM00937 LFERR_RS11785 LFERR_RS11795 SM00028 Tetratricopeptide repeats LFERR_RS11815 SM01400 LFERR_RS11815 LFERR_RS11840 SM00966 SpoVT / AbrB like domain LFERR_RS11880 SM00382 ATPases associated with a variety of cellular activities LFERR_RS11945 SM00487 DEAD-like helicases superfamily LFERR_RS11975 SM00974 LFERR_RS11975 LFERR_RS11980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS11995 SM00342 helix_turn_helix, arabinose operon control protein LFERR_RS11995 SM00478 endonuclease III LFERR_RS11995 SM01009 AlkA N-terminal domain LFERR_RS12060 SM01011 Aminopeptidase P, N-terminal domain LFERR_RS12070 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12075 SM01005 Alanine racemase, C-terminal domain LFERR_RS12080 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12150 SM00244 prohibitin homologues LFERR_RS12160 SM00642 Alpha-amylase domain LFERR_RS12225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LFERR_RS12260 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12260 SM00962 SRP54-type protein, GTPase domain LFERR_RS12260 SM00963 SRP54-type protein, helical bundle domain LFERR_RS12275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LFERR_RS12280 SM00226 Low molecular weight phosphatase family LFERR_RS12290 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12360 SM00327 von Willebrand factor (vWF) type A domain LFERR_RS12370 SM00986 Uracil DNA glycosylase superfamily LFERR_RS12370 SM00987 UreE urease accessory protein, C-terminal domain LFERR_RS12380 SM00966 SpoVT / AbrB like domain LFERR_RS12395 SM00966 SpoVT / AbrB like domain LFERR_RS12410 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12450 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12450 SM00448 cheY-homologous receiver domain LFERR_RS12455 SM00091 PAS domain LFERR_RS12455 SM00387 Histidine kinase-like ATPases LFERR_RS12455 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS12475 SM00460 Transglutaminase/protease-like homologues LFERR_RS12480 SM00763 PrkA AAA domain LFERR_RS12505 SM00938 Nitrogen regulatory protein P-II LFERR_RS12545 SM00936 Penicillin-binding protein 5, C-terminal domain LFERR_RS12595 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12600 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS12625 SM00831 Cation transporter/ATPase, N-terminus LFERR_RS12675 SM00316 Ribosomal protein S1-like RNA-binding domain LFERR_RS12680 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12680 SM00448 cheY-homologous receiver domain LFERR_RS12690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LFERR_RS12690 SM00387 Histidine kinase-like ATPases LFERR_RS12690 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS12720 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12825 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12840 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12845 SM00382 ATPases associated with a variety of cellular activities LFERR_RS12915 SM00822 LFERR_RS12915 LFERR_RS12915 SM00823 Phosphopantetheine attachment site LFERR_RS12915 SM00825 Beta-ketoacyl synthase LFERR_RS12915 SM00826 LFERR_RS12915 LFERR_RS12915 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LFERR_RS12915 SM00829 Enoylreductase LFERR_RS12915 SM01294 LFERR_RS12915 LFERR_RS12945 SM00478 endonuclease III LFERR_RS12995 SM00382 ATPases associated with a variety of cellular activities LFERR_RS13015 SM00116 Domain in cystathionine beta-synthase and other proteins. LFERR_RS13130 SM00961 Ribulose bisphosphate carboxylase, small chain LFERR_RS13140 SM00327 von Willebrand factor (vWF) type A domain LFERR_RS13145 SM00052 Putative diguanylate phosphodiesterase LFERR_RS13145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LFERR_RS13145 SM00267 diguanylate cyclase LFERR_RS13165 SM00732 Likely ribonuclease with RNase H fold. LFERR_RS13200 SM00861 Transketolase, pyrimidine binding domain LFERR_RS13220 SM00859 Semialdehyde dehydrogenase, NAD binding domain LFERR_RS13280 SM00363 S4 RNA-binding domain LFERR_RS13285 SM00831 Cation transporter/ATPase, N-terminus LFERR_RS13310 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LFERR_RS13310 SM00474 3'-5' exonuclease LFERR_RS13310 SM00475 5'-3' exonuclease LFERR_RS13310 SM00482 DNA polymerase A domain LFERR_RS13340 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LFERR_RS13350 SM00271 DnaJ molecular chaperone homology domain LFERR_RS13365 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LFERR_RS13365 SM00481 DNA polymerase alpha chain like domain LFERR_RS13365 SM00483 DNA polymerase X family LFERR_RS13505 SM00387 Histidine kinase-like ATPases LFERR_RS13505 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS13510 SM00448 cheY-homologous receiver domain LFERR_RS13515 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. LFERR_RS13590 SM00387 Histidine kinase-like ATPases LFERR_RS13610 SM00830 Chorismate mutase type II LFERR_RS13615 SM00382 ATPases associated with a variety of cellular activities LFERR_RS13690 SM00382 ATPases associated with a variety of cellular activities LFERR_RS13845 SM00382 ATPases associated with a variety of cellular activities LFERR_RS13885 SM00470 ParB-like nuclease domain LFERR_RS13900 SM01228 LFERR_RS13900 LFERR_RS13915 SM00852 Probable molybdopterin binding domain LFERR_RS13990 SM00382 ATPases associated with a variety of cellular activities LFERR_RS14065 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFERR_RS14070 SM00861 Transketolase, pyrimidine binding domain LFERR_RS14160 SM00448 cheY-homologous receiver domain LFERR_RS14160 SM00862 Transcriptional regulatory protein, C terminal LFERR_RS14165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LFERR_RS14165 SM00387 Histidine kinase-like ATPases LFERR_RS14165 SM00388 His Kinase A (phosphoacceptor) domain LFERR_RS14280 SM01004 Delta-aminolevulinic acid dehydratase LFERR_RS14320 SM00822 LFERR_RS14320 LFERR_RS14340 SM00530 Helix-turn-helix XRE-family like proteins LFERR_RS14470 SM00530 Helix-turn-helix XRE-family like proteins LFERR_RS14490 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LFERR_RS14490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LFERR_RS14490 SM00091 PAS domain LFERR_RS14490 SM00267 diguanylate cyclase