locus-tag class description MQE22_RS00005 PF00308 Bacterial dnaA protein MQE22_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix MQE22_RS00005 PF11638 DnaA N-terminal domain MQE22_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MQE22_RS00010 PF02767 DNA polymerase III beta subunit, central domain MQE22_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MQE22_RS00015 PF02463 RecF/RecN/SMC N terminal domain MQE22_RS00020 PF01751 Toprim domain MQE22_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus MQE22_RS00020 PF00204 DNA gyrase B MQE22_RS00020 PF18053 DNA gyrase B subunit insert domain MQE22_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS00030 PF18766 SWI2/SNF2 ATPase MQE22_RS00030 PF12008 Type I restriction and modification enzyme - subunit R C terminal MQE22_RS00030 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MQE22_RS00035 PF02661 Fic/DOC family MQE22_RS00040 PF01420 Type I restriction modification DNA specificity domain MQE22_RS00045 PF17761 DUF1016 N-terminal domain MQE22_RS00045 PF06250 YhcG PDDEXK nuclease domain MQE22_RS00050 PF12161 HsdM N-terminal domain MQE22_RS00050 PF02384 N-6 DNA Methylase MQE22_RS00055 PF00083 Sugar (and other) transporter MQE22_RS00060 PF00005 ABC transporter MQE22_RS00060 PF17912 MalK OB fold domain MQE22_RS00065 PF00528 Binding-protein-dependent transport system inner membrane component MQE22_RS00070 PF00528 Binding-protein-dependent transport system inner membrane component MQE22_RS00075 PF01547 Bacterial extracellular solute-binding protein MQE22_RS00085 PF02653 Branched-chain amino acid transport system / permease component MQE22_RS00090 PF00005 ABC transporter MQE22_RS00095 PF13407 Periplasmic binding protein domain MQE22_RS00100 PF00294 pfkB family carbohydrate kinase MQE22_RS00105 PF00488 MutS domain V MQE22_RS00105 PF01713 Smr domain MQE22_RS00110 PF00488 MutS domain V MQE22_RS00110 PF05190 MutS family domain IV MQE22_RS00110 PF05192 MutS domain III MQE22_RS00110 PF05188 MutS domain II MQE22_RS00110 PF01624 MutS domain I MQE22_RS00115 PF01266 FAD dependent oxidoreductase MQE22_RS00115 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MQE22_RS00120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MQE22_RS00120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MQE22_RS00125 PF00230 Major intrinsic protein MQE22_RS00130 PF02733 Dak1 domain MQE22_RS00135 PF02734 DAK2 domain MQE22_RS00140 PF05524 PEP-utilising enzyme, N-terminal MQE22_RS00140 PF00391 PEP-utilising enzyme, mobile domain MQE22_RS00140 PF02896 PEP-utilising enzyme, TIM barrel domain MQE22_RS00140 PF00381 PTS HPr component phosphorylation site MQE22_RS00140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MQE22_RS00145 PF01544 CorA-like Mg2+ transporter protein MQE22_RS00150 PF03776 Septum formation topological specificity factor MinE MQE22_RS00155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MQE22_RS00160 PF05209 Septum formation inhibitor MinC, N-terminal domain MQE22_RS00160 PF03775 Septum formation inhibitor MinC, C-terminal domain MQE22_RS00165 PF11953 Domain of unknown function (DUF3470) MQE22_RS00165 PF00037 4Fe-4S binding domain MQE22_RS00170 PF01131 DNA topoisomerase MQE22_RS00170 PF01751 Toprim domain MQE22_RS00170 PF13368 Topoisomerase C-terminal repeat MQE22_RS00175 PF04361 Protein of unknown function (DUF494) MQE22_RS00180 PF17782 DprA winged helix domain MQE22_RS00180 PF02481 DNA recombination-mediator protein A MQE22_RS00185 PF01476 LysM domain MQE22_RS00190 PF01327 Polypeptide deformylase MQE22_RS00195 PF02911 Formyl transferase, C-terminal domain MQE22_RS00195 PF00551 Formyl transferase MQE22_RS00200 PF01029 NusB family MQE22_RS00200 PF01189 16S rRNA methyltransferase RsmB/F MQE22_RS00205 PF00989 PAS fold MQE22_RS00205 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS00205 PF00672 HAMP domain MQE22_RS00210 PF00158 Sigma-54 interaction domain MQE22_RS00210 PF00072 Response regulator receiver domain MQE22_RS00210 PF02954 Bacterial regulatory protein, Fis family MQE22_RS00215 PF00994 Probable molybdopterin binding domain MQE22_RS00220 PF01134 Glucose inhibited division protein A MQE22_RS00220 PF13932 GidA associated domain MQE22_RS00225 PF02527 rRNA small subunit methyltransferase G MQE22_RS00230 PF13614 AAA domain MQE22_RS00235 PF02195 ParB-like nuclease domain MQE22_RS00235 PF17762 HTH domain found in ParB protein MQE22_RS00245 PF00119 ATP synthase A chain MQE22_RS00250 PF00137 ATP synthase subunit C MQE22_RS00255 PF00430 ATP synthase B/B' CF(0) MQE22_RS00260 PF00213 ATP synthase delta (OSCP) subunit MQE22_RS00265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MQE22_RS00265 PF00306 ATP synthase alpha/beta chain, C terminal domain MQE22_RS00265 PF02874 ATP synthase alpha/beta family, beta-barrel domain MQE22_RS00270 PF00231 ATP synthase MQE22_RS00275 PF02874 ATP synthase alpha/beta family, beta-barrel domain MQE22_RS00275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MQE22_RS00280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MQE22_RS00280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MQE22_RS00285 PF00132 Bacterial transferase hexapeptide (six repeats) MQE22_RS00285 PF14602 Hexapeptide repeat of succinyl-transferase MQE22_RS00285 PF12804 MobA-like NTP transferase domain MQE22_RS00290 PF01380 SIS domain MQE22_RS00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS00295 PF03466 LysR substrate binding domain MQE22_RS00300 PF07690 Major Facilitator Superfamily MQE22_RS00305 PF02321 Outer membrane efflux protein MQE22_RS00310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS00310 PF00529 HlyD membrane-fusion protein of T1SS MQE22_RS00315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS00315 PF00529 HlyD membrane-fusion protein of T1SS MQE22_RS00320 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS00320 PF14759 Reductase C-terminal MQE22_RS00325 PF04343 Protein of unknown function, DUF488 MQE22_RS00330 PF07690 Major Facilitator Superfamily MQE22_RS00340 PF02665 Nitrate reductase gamma subunit MQE22_RS00345 PF02613 Nitrate reductase delta subunit MQE22_RS00350 PF13247 4Fe-4S dicluster domain MQE22_RS00350 PF14711 Respiratory nitrate reductase beta C-terminal MQE22_RS00355 PF14710 Respiratory nitrate reductase alpha N-terminal MQE22_RS00355 PF01568 Molydopterin dinucleotide binding domain MQE22_RS00355 PF00384 Molybdopterin oxidoreductase MQE22_RS00375 PF13417 Glutathione S-transferase, N-terminal domain MQE22_RS00380 PF03595 Voltage-dependent anion channel MQE22_RS00400 PF01597 Glycine cleavage H-protein MQE22_RS00415 PF00970 Oxidoreductase FAD-binding domain MQE22_RS00415 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE22_RS00415 PF00175 Oxidoreductase NAD-binding domain MQE22_RS00420 PF00970 Oxidoreductase FAD-binding domain MQE22_RS00420 PF00042 Globin MQE22_RS00420 PF00175 Oxidoreductase NAD-binding domain MQE22_RS00425 PF13545 Crp-like helix-turn-helix domain MQE22_RS00425 PF00027 Cyclic nucleotide-binding domain MQE22_RS00430 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS00430 PF01548 Transposase MQE22_RS00435 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS00435 PF01548 Transposase MQE22_RS00440 PF01548 Transposase MQE22_RS00440 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS00445 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS00445 PF01548 Transposase MQE22_RS00450 PF08721 TnsA endonuclease C terminal MQE22_RS00450 PF08722 TnsA endonuclease N terminal MQE22_RS00455 PF00665 Integrase core domain MQE22_RS00460 PF13401 AAA domain MQE22_RS00460 PF11426 Tn7 transposition regulator TnsC MQE22_RS00480 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS00480 PF00563 EAL domain MQE22_RS00480 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS00485 PF00563 EAL domain MQE22_RS00485 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS00485 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS00490 PF00753 Metallo-beta-lactamase superfamily MQE22_RS00490 PF00581 Rhodanese-like domain MQE22_RS00550 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS00550 PF01548 Transposase MQE22_RS00555 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS00555 PF01548 Transposase MQE22_RS00560 PF00916 Sulfate permease family MQE22_RS00560 PF01740 STAS domain MQE22_RS00565 PF00817 impB/mucB/samB family MQE22_RS00565 PF11799 impB/mucB/samB family C-terminal domain MQE22_RS00590 PF00563 EAL domain MQE22_RS00590 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS00590 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS00595 PF00226 DnaJ domain MQE22_RS00595 PF01556 DnaJ C terminal domain MQE22_RS00600 PF00580 UvrD/REP helicase N-terminal domain MQE22_RS00600 PF13361 UvrD-like helicase C-terminal domain MQE22_RS00610 PF00672 HAMP domain MQE22_RS00610 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS00615 PF00486 Transcriptional regulatory protein, C terminal MQE22_RS00615 PF00072 Response regulator receiver domain MQE22_RS00630 PF13533 Biotin-lipoyl like MQE22_RS00635 PF00873 AcrB/AcrD/AcrF family MQE22_RS00645 PF01741 Large-conductance mechanosensitive channel, MscL MQE22_RS00650 PF02646 RmuC family MQE22_RS00655 PF02401 LytB protein MQE22_RS00660 PF04452 RNA methyltransferase MQE22_RS00665 PF00459 Inositol monophosphatase family MQE22_RS00670 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MQE22_RS00675 PF00456 Transketolase, thiamine diphosphate binding domain MQE22_RS00675 PF02780 Transketolase, C-terminal domain MQE22_RS00675 PF02779 Transketolase, pyrimidine binding domain MQE22_RS00680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MQE22_RS00680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MQE22_RS00685 PF00162 Phosphoglycerate kinase MQE22_RS00690 PF00224 Pyruvate kinase, barrel domain MQE22_RS00690 PF02887 Pyruvate kinase, alpha/beta domain MQE22_RS00695 PF01116 Fructose-bisphosphate aldolase class-II MQE22_RS00700 PF00834 Ribulose-phosphate 3 epimerase family MQE22_RS00705 PF13419 Haloacid dehalogenase-like hydrolase MQE22_RS00710 PF04715 Anthranilate synthase component I, N terminal region MQE22_RS00710 PF00425 chorismate binding enzyme MQE22_RS00715 PF00117 Glutamine amidotransferase class-I MQE22_RS00720 PF00591 Glycosyl transferase family, a/b domain MQE22_RS00720 PF02885 Glycosyl transferase family, helical bundle domain MQE22_RS00725 PF00218 Indole-3-glycerol phosphate synthase MQE22_RS00730 PF02566 OsmC-like protein MQE22_RS00735 PF02082 Transcriptional regulator MQE22_RS00740 PF03232 Ubiquinone biosynthesis protein COQ7 MQE22_RS00750 PF02129 X-Pro dipeptidyl-peptidase (S15 family) MQE22_RS00755 PF00005 ABC transporter MQE22_RS00760 PF01061 ABC-2 type transporter MQE22_RS00770 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system MQE22_RS00800 PF00114 Pilin (bacterial filament) MQE22_RS00800 PF07963 Prokaryotic N-terminal methylation motif MQE22_RS00820 PF02634 FdhD/NarQ family MQE22_RS00825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MQE22_RS00825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MQE22_RS00830 PF01678 Diaminopimelate epimerase MQE22_RS00845 PF02899 Phage integrase, N-terminal SAM-like domain MQE22_RS00845 PF00589 Phage integrase family MQE22_RS00850 PF00227 Proteasome subunit MQE22_RS00855 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS00855 PF07724 AAA domain (Cdc48 subfamily) MQE22_RS00860 PF00924 Mechanosensitive ion channel MQE22_RS00860 PF12795 Mechanosensitive ion channel porin domain MQE22_RS00860 PF12794 Mechanosensitive ion channel inner membrane domain 1 MQE22_RS00870 PF04542 Sigma-70 region 2 MQE22_RS00870 PF04545 Sigma-70, region 4 MQE22_RS00875 PF18075 FtsX extracellular domain MQE22_RS00880 PF00005 ABC transporter MQE22_RS00885 PF00448 SRP54-type protein, GTPase domain MQE22_RS00885 PF02881 SRP54-type protein, helical bundle domain MQE22_RS00895 PF01467 Cytidylyltransferase-like MQE22_RS00900 PF00037 4Fe-4S binding domain MQE22_RS00905 PF00350 Dynamin family MQE22_RS00910 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MQE22_RS00910 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MQE22_RS00910 PF06827 Zinc finger found in FPG and IleRS MQE22_RS00915 PF13847 Methyltransferase domain MQE22_RS00915 PF17827 PrmC N-terminal domain MQE22_RS00920 PF00472 RF-1 domain MQE22_RS00920 PF03462 PCRF domain MQE22_RS00925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MQE22_RS00925 PF01488 Shikimate / quinate 5-dehydrogenase MQE22_RS00925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MQE22_RS00935 PF03550 Outer membrane lipoprotein LolB MQE22_RS00940 PF08544 GHMP kinases C terminal MQE22_RS00940 PF00288 GHMP kinases N terminal domain MQE22_RS00950 PF14572 Phosphoribosyl synthetase-associated domain MQE22_RS00950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MQE22_RS00960 PF17092 Penicillin-binding protein OB-like domain MQE22_RS00960 PF00912 Transglycosylase MQE22_RS00960 PF00905 Penicillin binding protein transpeptidase domain MQE22_RS00965 PF07943 Penicillin-binding protein 5, C-terminal domain MQE22_RS00965 PF00768 D-alanyl-D-alanine carboxypeptidase MQE22_RS00970 PF00342 Phosphoglucose isomerase MQE22_RS00975 PF01654 Cytochrome bd terminal oxidase subunit I MQE22_RS00980 PF02322 Cytochrome bd terminal oxidase subunit II MQE22_RS00995 PF00679 Elongation factor G C-terminus MQE22_RS00995 PF00009 Elongation factor Tu GTP binding domain MQE22_RS00995 PF03144 Elongation factor Tu domain 2 MQE22_RS01000 PF08241 Methyltransferase domain MQE22_RS01005 PF04379 ApaG domain MQE22_RS01010 PF06827 Zinc finger found in FPG and IleRS MQE22_RS01010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MQE22_RS01010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MQE22_RS01020 PF00120 Glutamine synthetase, catalytic domain MQE22_RS01020 PF03951 Glutamine synthetase, beta-Grasp domain MQE22_RS01030 PF01975 Survival protein SurE MQE22_RS01040 PF04542 Sigma-70 region 2 MQE22_RS01040 PF04539 Sigma-70 region 3 MQE22_RS01040 PF04545 Sigma-70, region 4 MQE22_RS01040 PF00140 Sigma-70 factor, region 1.2 MQE22_RS01045 PF04430 Protein of unknown function (DUF498/DUF598) MQE22_RS01050 PF00155 Aminotransferase class I and II MQE22_RS01055 PF03447 Homoserine dehydrogenase, NAD binding domain MQE22_RS01055 PF00742 Homoserine dehydrogenase MQE22_RS01055 PF01842 ACT domain MQE22_RS01060 PF00291 Pyridoxal-phosphate dependent enzyme MQE22_RS01070 PF01368 DHH family MQE22_RS01070 PF02272 DHHA1 domain MQE22_RS01070 PF17768 RecJ OB domain MQE22_RS01075 PF00403 Heavy-metal-associated domain MQE22_RS01080 PF07690 Major Facilitator Superfamily MQE22_RS01085 PF00141 Peroxidase MQE22_RS01090 PF00384 Molybdopterin oxidoreductase MQE22_RS01100 PF08240 Alcohol dehydrogenase GroES-like domain MQE22_RS01100 PF00107 Zinc-binding dehydrogenase MQE22_RS01105 PF00756 Putative esterase MQE22_RS01115 PF01336 OB-fold nucleic acid binding domain MQE22_RS01115 PF00152 tRNA synthetases class II (D, K and N) MQE22_RS01120 PF02687 FtsX-like permease family MQE22_RS01120 PF12704 MacB-like periplasmic core domain MQE22_RS01125 PF00005 ABC transporter MQE22_RS01135 PF00753 Metallo-beta-lactamase superfamily MQE22_RS01135 PF03772 Competence protein MQE22_RS01140 PF01618 MotA/TolQ/ExbB proton channel family MQE22_RS01145 PF02472 Biopolymer transport protein ExbD/TolR MQE22_RS01160 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MQE22_RS01165 PF03966 Trm112p-like protein MQE22_RS01170 PF02348 Cytidylyltransferase MQE22_RS01175 PF00719 Inorganic pyrophosphatase MQE22_RS01185 PF07724 AAA domain (Cdc48 subfamily) MQE22_RS01185 PF10431 C-terminal, D2-small domain, of ClpB protein MQE22_RS01185 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS01185 PF02861 Clp amino terminal domain, pathogenicity island component MQE22_RS01185 PF17871 AAA lid domain MQE22_RS01190 PF02617 ATP-dependent Clp protease adaptor protein ClpS MQE22_RS01205 PF03572 Peptidase family S41 MQE22_RS01205 PF13180 PDZ domain MQE22_RS01210 PF01551 Peptidase family M23 MQE22_RS01210 PF01476 LysM domain MQE22_RS01215 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MQE22_RS01215 PF01676 Metalloenzyme superfamily MQE22_RS01220 PF00343 Carbohydrate phosphorylase MQE22_RS01230 PF11455 Protein of unknown function (DUF3018) MQE22_RS01240 PF00294 pfkB family carbohydrate kinase MQE22_RS01250 PF02772 S-adenosylmethionine synthetase, central domain MQE22_RS01250 PF00438 S-adenosylmethionine synthetase, N-terminal domain MQE22_RS01250 PF02773 S-adenosylmethionine synthetase, C-terminal domain MQE22_RS01255 PF05221 S-adenosyl-L-homocysteine hydrolase MQE22_RS01255 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MQE22_RS01260 PF02219 Methylenetetrahydrofolate reductase MQE22_RS01265 PF00485 Phosphoribulokinase / Uridine kinase family MQE22_RS01315 PF01370 NAD dependent epimerase/dehydratase family MQE22_RS01320 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS01325 PF01370 NAD dependent epimerase/dehydratase family MQE22_RS01330 PF00155 Aminotransferase class I and II MQE22_RS01335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE22_RS01335 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS01340 PF00689 Cation transporting ATPase, C-terminus MQE22_RS01340 PF00690 Cation transporter/ATPase, N-terminus MQE22_RS01345 PF02397 Bacterial sugar transferase MQE22_RS01355 PF02563 Polysaccharide biosynthesis/export protein MQE22_RS01355 PF10531 SLBB domain MQE22_RS01355 PF18412 Outer-membrane lipoprotein Wza C-terminal domain MQE22_RS01360 PF13614 AAA domain MQE22_RS01360 PF13807 G-rich domain on putative tyrosine kinase MQE22_RS01360 PF02706 Chain length determinant protein MQE22_RS01395 PF00535 Glycosyl transferase family 2 MQE22_RS01400 PF00534 Glycosyl transferases group 1 MQE22_RS01400 PF13439 Glycosyltransferase Family 4 MQE22_RS01405 PF13439 Glycosyltransferase Family 4 MQE22_RS01405 PF00534 Glycosyl transferases group 1 MQE22_RS01410 PF00132 Bacterial transferase hexapeptide (six repeats) MQE22_RS01415 PF13579 Glycosyl transferase 4-like domain MQE22_RS01415 PF00534 Glycosyl transferases group 1 MQE22_RS01425 PF01370 NAD dependent epimerase/dehydratase family MQE22_RS01430 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS01435 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS01455 PF00271 Helicase conserved C-terminal domain MQE22_RS01455 PF00270 DEAD/DEAH box helicase MQE22_RS01455 PF03880 DbpA RNA binding domain MQE22_RS01460 PF00313 'Cold-shock' DNA-binding domain MQE22_RS01480 PF00535 Glycosyl transferase family 2 MQE22_RS01510 PF02954 Bacterial regulatory protein, Fis family MQE22_RS01510 PF00072 Response regulator receiver domain MQE22_RS01510 PF00158 Sigma-54 interaction domain MQE22_RS01515 PF17764 3′ DNA-binding domain (3′BD) MQE22_RS01515 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MQE22_RS01515 PF00270 DEAD/DEAH box helicase MQE22_RS01515 PF00271 Helicase conserved C-terminal domain MQE22_RS01515 PF18074 Primosomal protein N C-terminal domain MQE22_RS01520 PF01040 UbiA prenyltransferase family MQE22_RS01530 PF00398 Ribosomal RNA adenine dimethylase MQE22_RS01535 PF00483 Nucleotidyl transferase MQE22_RS01545 PF09095 Domain of unknown function (DUF1926) MQE22_RS01545 PF03065 Glycosyl hydrolase family 57 MQE22_RS01545 PF09094 Domain of unknown function (DUF1925) MQE22_RS01550 PF00480 ROK family MQE22_RS01555 PF01177 Asp/Glu/Hydantoin racemase MQE22_RS01565 PF04286 Protein of unknown function (DUF445) MQE22_RS01570 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MQE22_RS01575 PF01938 TRAM domain MQE22_RS01575 PF00919 Uncharacterized protein family UPF0004 MQE22_RS01575 PF04055 Radical SAM superfamily MQE22_RS01580 PF02562 PhoH-like protein MQE22_RS01585 PF02130 Uncharacterized protein family UPF0054 MQE22_RS01590 PF03471 Transporter associated domain MQE22_RS01590 PF00571 CBS domain MQE22_RS01595 PF00795 Carbon-nitrogen hydrolase MQE22_RS01625 PF04185 Phosphoesterase family MQE22_RS01625 PF05506 Domain of unknown function (DUF756) MQE22_RS01635 PF04143 Sulphur transport MQE22_RS01640 PF00753 Metallo-beta-lactamase superfamily MQE22_RS01645 PF01343 Peptidase family S49 MQE22_RS01660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MQE22_RS01660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MQE22_RS01660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MQE22_RS01660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MQE22_RS01700 PF00873 AcrB/AcrD/AcrF family MQE22_RS01710 PF00448 SRP54-type protein, GTPase domain MQE22_RS01710 PF02881 SRP54-type protein, helical bundle domain MQE22_RS01710 PF02978 Signal peptide binding domain MQE22_RS01715 PF00886 Ribosomal protein S16 MQE22_RS01720 PF05239 PRC-barrel domain MQE22_RS01720 PF01782 RimM N-terminal domain MQE22_RS01725 PF01746 tRNA (Guanine-1)-methyltransferase MQE22_RS01730 PF01245 Ribosomal protein L19 MQE22_RS01740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MQE22_RS01740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MQE22_RS01745 PF02899 Phage integrase, N-terminal SAM-like domain MQE22_RS01745 PF00589 Phage integrase family MQE22_RS01750 PF13180 PDZ domain MQE22_RS01755 PF00085 Thioredoxin MQE22_RS01770 PF00464 Serine hydroxymethyltransferase MQE22_RS01775 PF03477 ATP cone domain MQE22_RS01780 PF01872 RibD C-terminal domain MQE22_RS01780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MQE22_RS01785 PF00677 Lumazine binding domain MQE22_RS01790 PF00925 GTP cyclohydrolase II MQE22_RS01790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MQE22_RS01795 PF00885 6,7-dimethyl-8-ribityllumazine synthase MQE22_RS01800 PF01029 NusB family MQE22_RS01815 PF03109 ABC1 family MQE22_RS01820 PF04972 BON domain MQE22_RS01820 PF00691 OmpA family MQE22_RS01840 PF03143 Elongation factor Tu C-terminal domain MQE22_RS01840 PF03144 Elongation factor Tu domain 2 MQE22_RS01840 PF00009 Elongation factor Tu GTP binding domain MQE22_RS01855 PF00467 KOW motif MQE22_RS01855 PF02357 Transcription termination factor nusG MQE22_RS01860 PF00298 Ribosomal protein L11, RNA binding domain MQE22_RS01860 PF03946 Ribosomal protein L11, N-terminal domain MQE22_RS01865 PF00687 Ribosomal protein L1p/L10e family MQE22_RS01870 PF00466 Ribosomal protein L10 MQE22_RS01875 PF00542 Ribosomal protein L7/L12 C-terminal domain MQE22_RS01875 PF16320 Ribosomal protein L7/L12 dimerisation domain MQE22_RS01880 PF04565 RNA polymerase Rpb2, domain 3 MQE22_RS01880 PF10385 RNA polymerase beta subunit external 1 domain MQE22_RS01880 PF00562 RNA polymerase Rpb2, domain 6 MQE22_RS01880 PF04560 RNA polymerase Rpb2, domain 7 MQE22_RS01880 PF04563 RNA polymerase beta subunit MQE22_RS01880 PF04561 RNA polymerase Rpb2, domain 2 MQE22_RS01885 PF00623 RNA polymerase Rpb1, domain 2 MQE22_RS01885 PF04998 RNA polymerase Rpb1, domain 5 MQE22_RS01885 PF05000 RNA polymerase Rpb1, domain 4 MQE22_RS01885 PF04983 RNA polymerase Rpb1, domain 3 MQE22_RS01885 PF04997 RNA polymerase Rpb1, domain 1 MQE22_RS01890 PF00164 Ribosomal protein S12/S23 MQE22_RS01895 PF00177 Ribosomal protein S7p/S5e MQE22_RS01900 PF03764 Elongation factor G, domain IV MQE22_RS01900 PF00009 Elongation factor Tu GTP binding domain MQE22_RS01900 PF03144 Elongation factor Tu domain 2 MQE22_RS01900 PF14492 Elongation Factor G, domain II MQE22_RS01900 PF00679 Elongation factor G C-terminus MQE22_RS01905 PF00009 Elongation factor Tu GTP binding domain MQE22_RS01905 PF03143 Elongation factor Tu C-terminal domain MQE22_RS01905 PF03144 Elongation factor Tu domain 2 MQE22_RS01910 PF00338 Ribosomal protein S10p/S20e MQE22_RS01915 PF00297 Ribosomal protein L3 MQE22_RS01920 PF00573 Ribosomal protein L4/L1 family MQE22_RS01925 PF00276 Ribosomal protein L23 MQE22_RS01930 PF03947 Ribosomal Proteins L2, C-terminal domain MQE22_RS01930 PF00181 Ribosomal Proteins L2, RNA binding domain MQE22_RS01935 PF00203 Ribosomal protein S19 MQE22_RS01940 PF00237 Ribosomal protein L22p/L17e MQE22_RS01945 PF00189 Ribosomal protein S3, C-terminal domain MQE22_RS01945 PF07650 KH domain MQE22_RS01950 PF00252 Ribosomal protein L16p/L10e MQE22_RS01955 PF00831 Ribosomal L29 protein MQE22_RS01960 PF00366 Ribosomal protein S17 MQE22_RS01965 PF00238 Ribosomal protein L14p/L23e MQE22_RS01970 PF00467 KOW motif MQE22_RS01970 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MQE22_RS01975 PF00281 Ribosomal protein L5 MQE22_RS01975 PF00673 ribosomal L5P family C-terminus MQE22_RS01980 PF00253 Ribosomal protein S14p/S29e MQE22_RS01985 PF00410 Ribosomal protein S8 MQE22_RS01990 PF00347 Ribosomal protein L6 MQE22_RS01995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MQE22_RS02000 PF00333 Ribosomal protein S5, N-terminal domain MQE22_RS02000 PF03719 Ribosomal protein S5, C-terminal domain MQE22_RS02005 PF00327 Ribosomal protein L30p/L7e MQE22_RS02010 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MQE22_RS02015 PF00344 SecY translocase MQE22_RS02020 PF05191 Adenylate kinase, active site lid MQE22_RS02025 PF01176 Translation initiation factor 1A / IF-1 MQE22_RS02030 PF00444 Ribosomal protein L36 MQE22_RS02035 PF00416 Ribosomal protein S13/S18 MQE22_RS02040 PF00411 Ribosomal protein S11 MQE22_RS02045 PF00163 Ribosomal protein S4/S9 N-terminal domain MQE22_RS02045 PF01479 S4 domain MQE22_RS02050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MQE22_RS02050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MQE22_RS02050 PF01000 RNA polymerase Rpb3/RpoA insert domain MQE22_RS02055 PF01196 Ribosomal protein L17 MQE22_RS02060 PF17755 UvrA DNA-binding domain MQE22_RS02060 PF17760 UvrA interaction domain MQE22_RS02065 PF00436 Single-strand binding protein family MQE22_RS02070 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS02070 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS02070 PF00563 EAL domain MQE22_RS02075 PF18073 Rubredoxin metal binding domain MQE22_RS02080 PF00842 Alanine racemase, C-terminal domain MQE22_RS02080 PF01168 Alanine racemase, N-terminal domain MQE22_RS02105 PF04403 Paraquat-inducible protein A MQE22_RS02110 PF00772 DnaB-like helicase N terminal domain MQE22_RS02110 PF03796 DnaB-like helicase C terminal domain MQE22_RS02115 PF03948 Ribosomal protein L9, C-terminal domain MQE22_RS02115 PF01281 Ribosomal protein L9, N-terminal domain MQE22_RS02120 PF01084 Ribosomal protein S18 MQE22_RS02125 PF01250 Ribosomal protein S6 MQE22_RS02130 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE22_RS02135 PF13520 Amino acid permease MQE22_RS02145 PF01938 TRAM domain MQE22_RS02145 PF05958 tRNA (Uracil-5-)-methyltransferase MQE22_RS02160 PF00291 Pyridoxal-phosphate dependent enzyme MQE22_RS02170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MQE22_RS02175 PF01145 SPFH domain / Band 7 family MQE22_RS02175 PF16200 C-terminal region of band_7 MQE22_RS02185 PF00128 Alpha amylase, catalytic domain MQE22_RS02185 PF02806 Alpha amylase, C-terminal all-beta domain MQE22_RS02185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MQE22_RS02190 PF00902 Sec-independent protein translocase protein (TatC) MQE22_RS02195 PF02416 mttA/Hcf106 family MQE22_RS02200 PF02416 mttA/Hcf106 family MQE22_RS02205 PF01502 Phosphoribosyl-AMP cyclohydrolase MQE22_RS02205 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MQE22_RS02210 PF00977 Histidine biosynthesis protein MQE22_RS02215 PF00977 Histidine biosynthesis protein MQE22_RS02220 PF00117 Glutamine amidotransferase class-I MQE22_RS02225 PF00475 Imidazoleglycerol-phosphate dehydratase MQE22_RS02230 PF00155 Aminotransferase class I and II MQE22_RS02235 PF00815 Histidinol dehydrogenase MQE22_RS02240 PF01634 ATP phosphoribosyltransferase MQE22_RS02245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MQE22_RS02250 PF00462 Glutaredoxin MQE22_RS02255 PF01722 BolA-like protein MQE22_RS02260 PF01061 ABC-2 type transporter MQE22_RS02265 PF00639 PPIC-type PPIASE domain MQE22_RS02265 PF09312 SurA N-terminal domain MQE22_RS02270 PF04453 LPS transport system D MQE22_RS02275 PF01636 Phosphotransferase enzyme family MQE22_RS02280 PF00483 Nucleotidyl transferase MQE22_RS02295 PF00571 CBS domain MQE22_RS02295 PF01380 SIS domain MQE22_RS02315 PF00005 ABC transporter MQE22_RS02320 PF04552 Sigma-54, DNA binding domain MQE22_RS02320 PF00309 Sigma-54 factor, Activator interacting domain (AID) MQE22_RS02320 PF04963 Sigma-54 factor, core binding domain MQE22_RS02325 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MQE22_RS02330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MQE22_RS02335 PF07475 HPr Serine kinase C-terminal domain MQE22_RS02335 PF02603 HPr Serine kinase N terminus MQE22_RS02340 PF03668 P-loop ATPase protein family MQE22_RS02350 PF00923 Transaldolase/Fructose-6-phosphate aldolase MQE22_RS02360 PF01476 LysM domain MQE22_RS02360 PF01464 Transglycosylase SLT domain MQE22_RS02365 PF00749 tRNA synthetases class I (E and Q), catalytic domain MQE22_RS02370 PF00330 Aconitase family (aconitate hydratase) MQE22_RS02375 PF00180 Isocitrate/isopropylmalate dehydrogenase MQE22_RS02380 PF08442 ATP-grasp domain MQE22_RS02380 PF00549 CoA-ligase MQE22_RS02390 PF02629 CoA binding domain MQE22_RS02390 PF00549 CoA-ligase MQE22_RS02395 PF00795 Carbon-nitrogen hydrolase MQE22_RS02395 PF02540 NAD synthase MQE22_RS02400 PF00543 Nitrogen regulatory protein P-II MQE22_RS02405 PF13525 Outer membrane lipoprotein MQE22_RS02410 PF00849 RNA pseudouridylate synthase MQE22_RS02415 PF02578 Multi-copper polyphenol oxidoreductase laccase MQE22_RS02420 PF03079 ARD/ARD' family MQE22_RS02425 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain MQE22_RS02425 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain MQE22_RS02435 PF00596 Class II Aldolase and Adducin N-terminal domain MQE22_RS02445 PF01327 Polypeptide deformylase MQE22_RS02485 PF01590 GAF domain MQE22_RS02485 PF02954 Bacterial regulatory protein, Fis family MQE22_RS02485 PF00158 Sigma-54 interaction domain MQE22_RS02495 PF00682 HMGL-like MQE22_RS02495 PF08502 LeuA allosteric (dimerisation) domain MQE22_RS02510 PF01510 N-acetylmuramoyl-L-alanine amidase MQE22_RS02520 PF02677 Epoxyqueuosine reductase QueH MQE22_RS02525 PF01329 Pterin 4 alpha carbinolamine dehydratase MQE22_RS02545 PF18030 RimK PreATP-grasp domain MQE22_RS02545 PF08443 RimK-like ATP-grasp domain MQE22_RS02550 PF01553 Acyltransferase MQE22_RS02560 PF02092 Glycyl-tRNA synthetase beta subunit MQE22_RS02565 PF02091 Glycyl-tRNA synthetase alpha subunit MQE22_RS02610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MQE22_RS02610 PF04055 Radical SAM superfamily MQE22_RS02615 PF03099 Biotin/lipoate A/B protein ligase family MQE22_RS02620 PF04359 Protein of unknown function (DUF493) MQE22_RS02625 PF07943 Penicillin-binding protein 5, C-terminal domain MQE22_RS02625 PF00768 D-alanyl-D-alanine carboxypeptidase MQE22_RS02630 PF01098 Cell cycle protein MQE22_RS02635 PF04093 rod shape-determining protein MreD MQE22_RS02650 PF02872 5'-nucleotidase, C-terminal domain MQE22_RS02650 PF00149 Calcineurin-like phosphoesterase MQE22_RS02675 PF00034 Cytochrome c MQE22_RS02675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MQE22_RS02675 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MQE22_RS02680 PF00158 Sigma-54 interaction domain MQE22_RS02680 PF02954 Bacterial regulatory protein, Fis family MQE22_RS02680 PF00072 Response regulator receiver domain MQE22_RS02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS02685 PF00672 HAMP domain MQE22_RS02685 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS02685 PF00989 PAS fold MQE22_RS02695 PF01967 MoaC family MQE22_RS02705 PF00384 Molybdopterin oxidoreductase MQE22_RS02705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MQE22_RS02705 PF01568 Molydopterin dinucleotide binding domain MQE22_RS02710 PF13247 4Fe-4S dicluster domain MQE22_RS02710 PF12800 4Fe-4S binding domain MQE22_RS02720 PF04055 Radical SAM superfamily MQE22_RS02720 PF06463 Molybdenum Cofactor Synthesis C MQE22_RS02725 PF00581 Rhodanese-like domain MQE22_RS02730 PF01206 Sulfurtransferase TusA MQE22_RS02735 PF13686 DsrE/DsrF/DrsH-like family MQE22_RS02750 PF01593 Flavin containing amine oxidoreductase MQE22_RS02765 PF02754 Cysteine-rich domain MQE22_RS02770 PF01597 Glycine cleavage H-protein MQE22_RS02780 PF01597 Glycine cleavage H-protein MQE22_RS02790 PF03099 Biotin/lipoate A/B protein ligase family MQE22_RS02795 PF01494 FAD binding domain MQE22_RS02835 PF07728 AAA domain (dynein-related subfamily) MQE22_RS02835 PF08406 CbbQ/NirQ/NorQ C-terminal MQE22_RS02845 PF00850 Histone deacetylase domain MQE22_RS02860 PF03466 LysR substrate binding domain MQE22_RS02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS02875 PF09335 SNARE associated Golgi protein MQE22_RS02880 PF05656 Protein of unknown function (DUF805) MQE22_RS02895 PF00877 NlpC/P60 family MQE22_RS02900 PF01578 Cytochrome C assembly protein MQE22_RS02910 PF13307 Helicase C-terminal domain MQE22_RS02910 PF04851 Type III restriction enzyme, res subunit MQE22_RS02915 PF00814 Glycoprotease family MQE22_RS02925 PF03144 Elongation factor Tu domain 2 MQE22_RS02925 PF16658 Class II release factor RF3, C-terminal domain MQE22_RS02925 PF00009 Elongation factor Tu GTP binding domain MQE22_RS02940 PF01386 Ribosomal L25p family MQE22_RS02940 PF14693 Ribosomal protein TL5, C-terminal domain MQE22_RS02945 PF01195 Peptidyl-tRNA hydrolase MQE22_RS02950 PF01926 50S ribosome-binding GTPase MQE22_RS02950 PF06071 Protein of unknown function (DUF933) MQE22_RS02955 PF02082 Transcriptional regulator MQE22_RS02980 PF00293 NUDIX domain MQE22_RS02985 PF00293 NUDIX domain MQE22_RS02990 PF00849 RNA pseudouridylate synthase MQE22_RS02990 PF01479 S4 domain MQE22_RS02995 PF04371 Porphyromonas-type peptidyl-arginine deiminase MQE22_RS03000 PF01790 Prolipoprotein diacylglyceryl transferase MQE22_RS03005 PF00580 UvrD/REP helicase N-terminal domain MQE22_RS03005 PF13361 UvrD-like helicase C-terminal domain MQE22_RS03010 PF01649 Ribosomal protein S20 MQE22_RS03015 PF03717 Penicillin-binding Protein dimerisation domain MQE22_RS03015 PF00905 Penicillin binding protein transpeptidase domain MQE22_RS03035 PF01812 5-formyltetrahydrofolate cyclo-ligase family MQE22_RS03040 PF13277 YmdB-like protein MQE22_RS03070 PF00582 Universal stress protein family MQE22_RS03075 PF04073 Aminoacyl-tRNA editing domain MQE22_RS03075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MQE22_RS03075 PF03129 Anticodon binding domain MQE22_RS03095 PF00732 GMC oxidoreductase MQE22_RS03095 PF05199 GMC oxidoreductase MQE22_RS03105 PF09137 Glucodextranase, domain N MQE22_RS03105 PF00723 Glycosyl hydrolases family 15 MQE22_RS03110 PF00348 Polyprenyl synthetase MQE22_RS03125 PF03717 Penicillin-binding Protein dimerisation domain MQE22_RS03125 PF00905 Penicillin binding protein transpeptidase domain MQE22_RS03140 PF00005 ABC transporter MQE22_RS03140 PF16326 ABC transporter C-terminal domain MQE22_RS03140 PF12848 ABC transporter MQE22_RS03150 PF03167 Uracil DNA glycosylase superfamily MQE22_RS03155 PF01370 NAD dependent epimerase/dehydratase family MQE22_RS03160 PF00296 Luciferase-like monooxygenase MQE22_RS03170 PF00929 Exonuclease MQE22_RS03175 PF00486 Transcriptional regulatory protein, C terminal MQE22_RS03175 PF00072 Response regulator receiver domain MQE22_RS03190 PF02472 Biopolymer transport protein ExbD/TolR MQE22_RS03195 PF01618 MotA/TolQ/ExbB proton channel family MQE22_RS03200 PF00593 TonB dependent receptor MQE22_RS03200 PF07660 Secretin and TonB N terminus short domain MQE22_RS03200 PF07715 TonB-dependent Receptor Plug Domain MQE22_RS03210 PF08340 Domain of unknown function (DUF1732) MQE22_RS03210 PF03755 YicC-like family, N-terminal region MQE22_RS03215 PF00625 Guanylate kinase MQE22_RS03220 PF01192 RNA polymerase Rpb6 MQE22_RS03225 PF02824 TGS domain MQE22_RS03225 PF13291 ACT domain MQE22_RS03225 PF04607 Region found in RelA / SpoT proteins MQE22_RS03230 PF01042 Endoribonuclease L-PSP MQE22_RS03240 PF00270 DEAD/DEAH box helicase MQE22_RS03240 PF00271 Helicase conserved C-terminal domain MQE22_RS03240 PF17191 RecG wedge domain MQE22_RS03245 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system MQE22_RS03250 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MQE22_RS03260 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS03260 PF08448 PAS fold MQE22_RS03265 PF01593 Flavin containing amine oxidoreductase MQE22_RS03270 PF01594 AI-2E family transporter MQE22_RS03280 PF02811 PHP domain MQE22_RS03285 PF01594 AI-2E family transporter MQE22_RS03295 PF08032 RNA 2'-O ribose methyltransferase substrate binding MQE22_RS03295 PF00588 SpoU rRNA Methylase family MQE22_RS03300 PF01026 TatD related DNase MQE22_RS03305 PF03099 Biotin/lipoate A/B protein ligase family MQE22_RS03305 PF12706 Beta-lactamase superfamily domain MQE22_RS03330 PF02913 FAD linked oxidases, C-terminal domain MQE22_RS03330 PF01565 FAD binding domain MQE22_RS03335 PF01565 FAD binding domain MQE22_RS03340 PF02754 Cysteine-rich domain MQE22_RS03340 PF13183 4Fe-4S dicluster domain MQE22_RS03345 PF02595 Glycerate kinase family MQE22_RS03360 PF01964 Radical SAM ThiC family MQE22_RS03360 PF13667 ThiC-associated domain MQE22_RS03375 PF02322 Cytochrome bd terminal oxidase subunit II MQE22_RS03380 PF01654 Cytochrome bd terminal oxidase subunit I MQE22_RS03390 PF00158 Sigma-54 interaction domain MQE22_RS03390 PF01590 GAF domain MQE22_RS03390 PF02954 Bacterial regulatory protein, Fis family MQE22_RS03400 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS03400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE22_RS03405 PF00155 Aminotransferase class I and II MQE22_RS03410 PF13439 Glycosyltransferase Family 4 MQE22_RS03430 PF01050 Mannose-6-phosphate isomerase MQE22_RS03430 PF00483 Nucleotidyl transferase MQE22_RS03445 PF00005 ABC transporter MQE22_RS03455 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS03460 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS03480 PF09820 Predicted AAA-ATPase MQE22_RS03480 PF08011 PD-(D/E)XK nuclease superfamily MQE22_RS03490 PF01925 Sulfite exporter TauE/SafE MQE22_RS03505 PF00654 Voltage gated chloride channel MQE22_RS03510 PF07690 Major Facilitator Superfamily MQE22_RS03515 PF00654 Voltage gated chloride channel MQE22_RS03520 PF02464 Competence-damaged protein MQE22_RS03520 PF18146 Damage-inducible protein CinA KH domain MQE22_RS03520 PF00994 Probable molybdopterin binding domain MQE22_RS03525 PF00551 Formyl transferase MQE22_RS03530 PF00586 AIR synthase related protein, N-terminal domain MQE22_RS03530 PF02769 AIR synthase related protein, C-terminal domain MQE22_RS03535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MQE22_RS03535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MQE22_RS03545 PF03631 Virulence factor BrkB MQE22_RS03555 PF01578 Cytochrome C assembly protein MQE22_RS03570 PF05140 ResB-like family MQE22_RS03580 PF02872 5'-nucleotidase, C-terminal domain MQE22_RS03580 PF00149 Calcineurin-like phosphoesterase MQE22_RS03595 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MQE22_RS03595 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MQE22_RS03600 PF06965 Na+/H+ antiporter 1 MQE22_RS03605 PF08264 Anticodon-binding domain of tRNA MQE22_RS03605 PF00133 tRNA synthetases class I (I, L, M and V) MQE22_RS03605 PF10458 Valyl tRNA synthetase tRNA binding arm MQE22_RS03620 PF00883 Cytosol aminopeptidase family, catalytic domain MQE22_RS03620 PF02789 Cytosol aminopeptidase family, N-terminal domain MQE22_RS03655 PF01491 Frataxin-like domain MQE22_RS03660 PF00270 DEAD/DEAH box helicase MQE22_RS03660 PF00271 Helicase conserved C-terminal domain MQE22_RS03660 PF00570 HRDC domain MQE22_RS03660 PF16124 RecQ zinc-binding MQE22_RS03660 PF09382 RQC domain MQE22_RS03670 PF00149 Calcineurin-like phosphoesterase MQE22_RS03680 PF02556 Preprotein translocase subunit SecB MQE22_RS03685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MQE22_RS03685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MQE22_RS03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS03690 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS03695 PF00158 Sigma-54 interaction domain MQE22_RS03695 PF00072 Response regulator receiver domain MQE22_RS03695 PF02954 Bacterial regulatory protein, Fis family MQE22_RS03705 PF13243 Squalene-hopene cyclase C-terminal domain MQE22_RS03705 PF13249 Squalene-hopene cyclase N-terminal domain MQE22_RS03715 PF01370 NAD dependent epimerase/dehydratase family MQE22_RS03730 PF04794 YdjC-like protein MQE22_RS03750 PF06463 Molybdenum Cofactor Synthesis C MQE22_RS03750 PF04055 Radical SAM superfamily MQE22_RS03765 PF02686 Glu-tRNAGln amidotransferase C subunit MQE22_RS03770 PF01425 Amidase MQE22_RS03775 PF02637 GatB domain MQE22_RS03775 PF02934 GatB/GatE catalytic domain MQE22_RS03785 PF01966 HD domain MQE22_RS03785 PF13286 Phosphohydrolase-associated domain MQE22_RS03790 PF02511 Thymidylate synthase complementing protein MQE22_RS03795 PF01761 3-dehydroquinate synthase MQE22_RS03800 PF01202 Shikimate kinase MQE22_RS03805 PF11741 AMIN domain MQE22_RS03805 PF00263 Bacterial type II and III secretion system protein MQE22_RS03805 PF03958 Bacterial type II/III secretion system short domain MQE22_RS03805 PF07660 Secretin and TonB N terminus short domain MQE22_RS03825 PF11104 Type IV pilus assembly protein PilM; MQE22_RS03830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MQE22_RS03835 PF01894 Uncharacterised protein family UPF0047 MQE22_RS03845 PF00488 MutS domain V MQE22_RS03845 PF01713 Smr domain MQE22_RS03850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MQE22_RS03850 PF00205 Thiamine pyrophosphate enzyme, central domain MQE22_RS03850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MQE22_RS03855 PF10369 Small subunit of acetolactate synthase MQE22_RS03860 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MQE22_RS03860 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MQE22_RS03865 PF02666 Phosphatidylserine decarboxylase MQE22_RS03870 PF01066 CDP-alcohol phosphatidyltransferase MQE22_RS03880 PF01078 Magnesium chelatase, subunit ChlI MQE22_RS03880 PF13335 Magnesium chelatase, subunit ChlI C-terminal MQE22_RS03885 PF04380 Membrane fusogenic activity MQE22_RS03890 PF01494 FAD binding domain MQE22_RS03895 PF01494 FAD binding domain MQE22_RS03905 PF00578 AhpC/TSA family MQE22_RS03905 PF10417 C-terminal domain of 1-Cys peroxiredoxin MQE22_RS03915 PF01207 Dihydrouridine synthase (Dus) MQE22_RS03925 PF03466 LysR substrate binding domain MQE22_RS03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS03930 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain MQE22_RS03930 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain MQE22_RS03935 PF00101 Ribulose bisphosphate carboxylase, small chain MQE22_RS03960 PF00936 BMC domain MQE22_RS03965 PF00936 BMC domain MQE22_RS03970 PF00936 BMC domain MQE22_RS03995 PF00092 von Willebrand factor type A domain MQE22_RS04000 PF00361 Proton-conducting membrane transporter MQE22_RS04000 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MQE22_RS04010 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) MQE22_RS04020 PF07728 AAA domain (dynein-related subfamily) MQE22_RS04020 PF08406 CbbQ/NirQ/NorQ C-terminal MQE22_RS04050 PF03091 CutA1 divalent ion tolerance protein MQE22_RS04055 PF02683 Cytochrome C biogenesis protein transmembrane region MQE22_RS04055 PF11412 Disulphide bond corrector protein DsbC MQE22_RS04065 PF01063 Amino-transferase class IV MQE22_RS04070 PF08335 GlnD PII-uridylyltransferase MQE22_RS04070 PF03710 Glutamate-ammonia ligase adenylyltransferase MQE22_RS04085 PF01180 Dihydroorotate dehydrogenase MQE22_RS04090 PF01218 Coproporphyrinogen III oxidase MQE22_RS04095 PF01300 Telomere recombination MQE22_RS04100 PF02843 Phosphoribosylglycinamide synthetase, C domain MQE22_RS04100 PF02844 Phosphoribosylglycinamide synthetase, N domain MQE22_RS04100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MQE22_RS04105 PF01808 AICARFT/IMPCHase bienzyme MQE22_RS04105 PF02142 MGS-like domain MQE22_RS04110 PF00156 Phosphoribosyl transferase domain MQE22_RS04110 PF09182 Bacterial purine repressor, N-terminal MQE22_RS04115 PF01747 ATP-sulfurylase MQE22_RS04115 PF14306 PUA-like domain MQE22_RS04125 PF00583 Acetyltransferase (GNAT) family MQE22_RS04130 PF13356 Arm DNA-binding domain MQE22_RS04130 PF00589 Phage integrase family MQE22_RS04150 PF02796 Helix-turn-helix domain of resolvase MQE22_RS04150 PF00239 Resolvase, N terminal domain MQE22_RS04185 PF00488 MutS domain V MQE22_RS04185 PF01713 Smr domain MQE22_RS04190 PF06912 Protein of unknown function (DUF1275) MQE22_RS04195 PF02913 FAD linked oxidases, C-terminal domain MQE22_RS04195 PF01565 FAD binding domain MQE22_RS04200 PF02569 Pantoate-beta-alanine ligase MQE22_RS04205 PF02548 Ketopantoate hydroxymethyltransferase MQE22_RS04210 PF01712 Deoxynucleoside kinase MQE22_RS04215 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MQE22_RS04220 PF01743 Poly A polymerase head domain MQE22_RS04225 PF12627 Probable RNA and SrmB- binding site of polymerase A MQE22_RS04225 PF12626 Polymerase A arginine-rich C-terminus MQE22_RS04225 PF01743 Poly A polymerase head domain MQE22_RS04230 PF05145 Transition state regulatory protein AbrB MQE22_RS04235 PF00571 CBS domain MQE22_RS04235 PF00478 IMP dehydrogenase / GMP reductase domain MQE22_RS04240 PF00117 Glutamine amidotransferase class-I MQE22_RS04240 PF00958 GMP synthase C terminal domain MQE22_RS04240 PF02540 NAD synthase MQE22_RS04270 PF00892 EamA-like transporter family MQE22_RS04275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MQE22_RS04280 PF01738 Dienelactone hydrolase family MQE22_RS04285 PF00440 Bacterial regulatory proteins, tetR family MQE22_RS04285 PF16925 Tetracyclin repressor-like, C-terminal domain MQE22_RS04290 PF01026 TatD related DNase MQE22_RS04295 PF00899 ThiF family MQE22_RS04310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MQE22_RS04320 PF01022 Bacterial regulatory protein, arsR family MQE22_RS04325 PF02321 Outer membrane efflux protein MQE22_RS04330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS04335 PF00873 AcrB/AcrD/AcrF family MQE22_RS04345 PF00581 Rhodanese-like domain MQE22_RS04350 PF00462 Glutaredoxin MQE22_RS04355 PF00085 Thioredoxin MQE22_RS04360 PF00795 Carbon-nitrogen hydrolase MQE22_RS04370 PF00005 ABC transporter MQE22_RS04370 PF06472 ABC transporter transmembrane region 2 MQE22_RS04385 PF01252 Signal peptidase (SPase) II MQE22_RS04390 PF08264 Anticodon-binding domain of tRNA MQE22_RS04390 PF00133 tRNA synthetases class I (I, L, M and V) MQE22_RS04390 PF06827 Zinc finger found in FPG and IleRS MQE22_RS04395 PF06574 FAD synthetase MQE22_RS04395 PF01687 Riboflavin kinase MQE22_RS04400 PF03023 Lipid II flippase MurJ MQE22_RS04405 PF01464 Transglycosylase SLT domain MQE22_RS04415 PF00950 ABC 3 transport family MQE22_RS04420 PF00950 ABC 3 transport family MQE22_RS04425 PF00005 ABC transporter MQE22_RS04430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MQE22_RS04430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MQE22_RS04430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MQE22_RS04430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MQE22_RS04445 PF05227 CHASE3 domain MQE22_RS04445 PF00672 HAMP domain MQE22_RS04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MQE22_RS04450 PF01584 CheW-like domain MQE22_RS04450 PF00072 Response regulator receiver domain MQE22_RS04480 PF00072 Response regulator receiver domain MQE22_RS04480 PF01584 CheW-like domain MQE22_RS04480 PF02895 Signal transducing histidine kinase, homodimeric domain MQE22_RS04480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS04480 PF01627 Hpt domain MQE22_RS04490 PF00072 Response regulator receiver domain MQE22_RS04500 PF00691 OmpA family MQE22_RS04500 PF13677 Membrane MotB of proton-channel complex MotA/MotB MQE22_RS04510 PF02623 FliW protein MQE22_RS04515 PF02599 Global regulator protein family MQE22_RS04535 PF00460 Flagella basal body rod protein MQE22_RS04540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MQE22_RS04540 PF00460 Flagella basal body rod protein MQE22_RS04545 PF03963 Flagellar hook capping protein - N-terminal region MQE22_RS04545 PF13860 FlgD Ig-like domain MQE22_RS04545 PF13861 FlgD Tudor-like domain MQE22_RS04550 PF07559 Flagellar basal body protein FlaE MQE22_RS04550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MQE22_RS04550 PF00460 Flagella basal body rod protein MQE22_RS04555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MQE22_RS04555 PF00460 Flagella basal body rod protein MQE22_RS04560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MQE22_RS04560 PF00460 Flagella basal body rod protein MQE22_RS04565 PF02107 Flagellar L-ring protein MQE22_RS04570 PF02119 Flagellar P-ring protein MQE22_RS04575 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MQE22_RS04575 PF10135 Rod binding protein MQE22_RS04585 PF00460 Flagella basal body rod protein MQE22_RS04585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MQE22_RS04590 PF00669 Bacterial flagellin N-terminal helical region MQE22_RS04595 PF00535 Glycosyl transferase family 2 MQE22_RS04605 PF00669 Bacterial flagellin N-terminal helical region MQE22_RS04605 PF00700 Bacterial flagellin C-terminal helical region MQE22_RS04615 PF02465 Flagellar hook-associated protein 2 N-terminus MQE22_RS04615 PF07195 Flagellar hook-associated protein 2 C-terminus MQE22_RS04615 PF07196 Flagellin hook IN motif MQE22_RS04630 PF02954 Bacterial regulatory protein, Fis family MQE22_RS04630 PF00158 Sigma-54 interaction domain MQE22_RS04630 PF06490 Flagellar regulatory protein FleQ MQE22_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS04635 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS04635 PF00989 PAS fold MQE22_RS04640 PF00072 Response regulator receiver domain MQE22_RS04640 PF00158 Sigma-54 interaction domain MQE22_RS04640 PF02954 Bacterial regulatory protein, Fis family MQE22_RS04645 PF02049 Flagellar hook-basal body complex protein FliE MQE22_RS04650 PF01514 Secretory protein of YscJ/FliF family MQE22_RS04650 PF08345 Flagellar M-ring protein C-terminal MQE22_RS04655 PF14842 FliG N-terminal domain MQE22_RS04655 PF14841 FliG middle domain MQE22_RS04655 PF01706 FliG C-terminal domain MQE22_RS04665 PF18269 T3SS EscN ATPase C-terminal domain MQE22_RS04665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MQE22_RS04680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MQE22_RS04680 PF02154 Flagellar motor switch protein FliM MQE22_RS04685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MQE22_RS04690 PF04347 Flagellar biosynthesis protein, FliO MQE22_RS04695 PF00813 FliP family MQE22_RS04700 PF01313 Bacterial export proteins, family 3 MQE22_RS04705 PF01311 Bacterial export proteins, family 1 MQE22_RS04710 PF01312 FlhB HrpN YscU SpaS Family MQE22_RS04715 PF00771 FHIPEP family MQE22_RS04720 PF00448 SRP54-type protein, GTPase domain MQE22_RS04725 PF10609 NUBPL iron-transfer P-loop NTPase MQE22_RS04730 PF04542 Sigma-70 region 2 MQE22_RS04730 PF04539 Sigma-70 region 3 MQE22_RS04730 PF04545 Sigma-70, region 4 MQE22_RS04735 PF01618 MotA/TolQ/ExbB proton channel family MQE22_RS04740 PF12344 Ultra-violet resistance protein B MQE22_RS04740 PF17757 UvrB interaction domain MQE22_RS04740 PF02151 UvrB/uvrC motif MQE22_RS04740 PF00271 Helicase conserved C-terminal domain MQE22_RS04740 PF04851 Type III restriction enzyme, res subunit MQE22_RS04745 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MQE22_RS04750 PF01850 PIN domain MQE22_RS04755 PF08240 Alcohol dehydrogenase GroES-like domain MQE22_RS04755 PF00107 Zinc-binding dehydrogenase MQE22_RS04760 PF06418 CTP synthase N-terminus MQE22_RS04760 PF00117 Glutamine amidotransferase class-I MQE22_RS04765 PF00793 DAHP synthetase I family MQE22_RS04770 PF00113 Enolase, C-terminal TIM barrel domain MQE22_RS04770 PF03952 Enolase, N-terminal domain MQE22_RS04775 PF04977 Septum formation initiator MQE22_RS04780 PF08207 Elongation factor P (EF-P) KOW-like domain MQE22_RS04780 PF09285 Elongation factor P, C-terminal MQE22_RS04780 PF01132 Elongation factor P (EF-P) OB domain MQE22_RS04790 PF01541 GIY-YIG catalytic domain MQE22_RS04790 PF02151 UvrB/uvrC motif MQE22_RS04790 PF08459 UvrC Helix-hairpin-helix N-terminal MQE22_RS04795 PF01066 CDP-alcohol phosphatidyltransferase MQE22_RS04800 PF17946 RecC C-terminal domain MQE22_RS04805 PF00580 UvrD/REP helicase N-terminal domain MQE22_RS04805 PF12705 PD-(D/E)XK nuclease superfamily MQE22_RS04805 PF13361 UvrD-like helicase C-terminal domain MQE22_RS04810 PF13538 UvrD-like helicase C-terminal domain MQE22_RS04825 PF04349 Periplasmic glucan biosynthesis protein, MdoG MQE22_RS04835 PF00535 Glycosyl transferase family 2 MQE22_RS04845 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS04850 PF04241 Protein of unknown function (DUF423) MQE22_RS04855 PF01343 Peptidase family S49 MQE22_RS04855 PF08496 Peptidase family S49 N-terminal MQE22_RS04860 PF02597 ThiS family MQE22_RS04865 PF02391 MoaE protein MQE22_RS04870 PF04461 Protein of unknown function (DUF520) MQE22_RS04880 PF01571 Aminomethyltransferase folate-binding domain MQE22_RS04880 PF08669 Glycine cleavage T-protein C-terminal barrel domain MQE22_RS04885 PF01597 Glycine cleavage H-protein MQE22_RS04890 PF02347 Glycine cleavage system P-protein MQE22_RS04895 PF02347 Glycine cleavage system P-protein MQE22_RS04900 PF17863 AAA lid domain MQE22_RS04900 PF07726 ATPase family associated with various cellular activities (AAA) MQE22_RS04910 PF11992 Domain of unknown function (DUF3488) MQE22_RS04910 PF13559 Domain of unknown function (DUF4129) MQE22_RS04910 PF01841 Transglutaminase-like superfamily MQE22_RS04915 PF00005 ABC transporter MQE22_RS04915 PF00664 ABC transporter transmembrane region MQE22_RS04920 PF00037 4Fe-4S binding domain MQE22_RS04920 PF11953 Domain of unknown function (DUF3470) MQE22_RS04935 PF01138 3' exoribonuclease family, domain 1 MQE22_RS04935 PF03725 3' exoribonuclease family, domain 2 MQE22_RS04940 PF01725 Ham1 family MQE22_RS04945 PF00140 Sigma-70 factor, region 1.2 MQE22_RS04945 PF04542 Sigma-70 region 2 MQE22_RS04945 PF04539 Sigma-70 region 3 MQE22_RS04945 PF04545 Sigma-70, region 4 MQE22_RS04950 PF01165 Ribosomal protein S21 MQE22_RS04960 PF00488 MutS domain V MQE22_RS04960 PF01713 Smr domain MQE22_RS04965 PF01807 CHC2 zinc finger MQE22_RS04965 PF08275 DNA primase catalytic core, N-terminal domain MQE22_RS04965 PF13662 Toprim domain MQE22_RS04965 PF08278 DNA primase DnaG DnaB-binding MQE22_RS04965 PF10410 DnaB-helicase binding domain of primase MQE22_RS04970 PF04545 Sigma-70, region 4 MQE22_RS04970 PF04539 Sigma-70 region 3 MQE22_RS04970 PF04542 Sigma-70 region 2 MQE22_RS04970 PF03979 Sigma-70 factor, region 1.1 MQE22_RS04970 PF04546 Sigma-70, non-essential region MQE22_RS04970 PF00140 Sigma-70 factor, region 1.2 MQE22_RS04990 PF00664 ABC transporter transmembrane region MQE22_RS04990 PF00005 ABC transporter MQE22_RS04995 PF00664 ABC transporter transmembrane region MQE22_RS04995 PF00005 ABC transporter MQE22_RS05005 PF01571 Aminomethyltransferase folate-binding domain MQE22_RS05015 PF02910 Fumarate reductase flavoprotein C-term MQE22_RS05015 PF00890 FAD binding domain MQE22_RS05020 PF08281 Sigma-70, region 4 MQE22_RS05020 PF04542 Sigma-70 region 2 MQE22_RS05030 PF13180 PDZ domain MQE22_RS05035 PF00679 Elongation factor G C-terminus MQE22_RS05035 PF00009 Elongation factor Tu GTP binding domain MQE22_RS05035 PF03144 Elongation factor Tu domain 2 MQE22_RS05035 PF06421 GTP-binding protein LepA C-terminus MQE22_RS05040 PF10502 Signal peptidase, peptidase S26 MQE22_RS05065 PF05690 Thiazole biosynthesis protein ThiG MQE22_RS05075 PF01225 Mur ligase family, catalytic domain MQE22_RS05075 PF08245 Mur ligase middle domain MQE22_RS05075 PF02875 Mur ligase family, glutamate ligase domain MQE22_RS05080 PF02441 Flavoprotein MQE22_RS05085 PF00005 ABC transporter MQE22_RS05090 PF02405 Permease MlaE MQE22_RS05105 PF00899 ThiF family MQE22_RS05120 PF02687 FtsX-like permease family MQE22_RS05120 PF12704 MacB-like periplasmic core domain MQE22_RS05125 PF00005 ABC transporter MQE22_RS05140 PF00118 TCP-1/cpn60 chaperonin family MQE22_RS05145 PF00166 Chaperonin 10 Kd subunit MQE22_RS05160 PF00482 Type II secretion system (T2SS), protein F MQE22_RS05170 PF00749 tRNA synthetases class I (E and Q), catalytic domain MQE22_RS05175 PF00586 AIR synthase related protein, N-terminal domain MQE22_RS05175 PF02769 AIR synthase related protein, C-terminal domain MQE22_RS05180 PF18146 Damage-inducible protein CinA KH domain MQE22_RS05180 PF02464 Competence-damaged protein MQE22_RS05180 PF00994 Probable molybdopterin binding domain MQE22_RS05185 PF00154 recA bacterial DNA recombination protein MQE22_RS05190 PF02631 RecX family MQE22_RS05195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MQE22_RS05195 PF02272 DHHA1 domain MQE22_RS05195 PF01411 tRNA synthetases class II (A) MQE22_RS05220 PF07690 Major Facilitator Superfamily MQE22_RS05230 PF16177 Acetyl-coenzyme A synthetase N-terminus MQE22_RS05230 PF00501 AMP-binding enzyme MQE22_RS05230 PF13193 AMP-binding enzyme C-terminal domain MQE22_RS05255 PF11897 Protein of unknown function (DUF3417) MQE22_RS05255 PF00343 Carbohydrate phosphorylase MQE22_RS05260 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS05260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE22_RS05265 PF03952 Enolase, N-terminal domain MQE22_RS05265 PF00113 Enolase, C-terminal TIM barrel domain MQE22_RS05270 PF02887 Pyruvate kinase, alpha/beta domain MQE22_RS05270 PF00391 PEP-utilising enzyme, mobile domain MQE22_RS05270 PF00224 Pyruvate kinase, barrel domain MQE22_RS05280 PF00294 pfkB family carbohydrate kinase MQE22_RS05285 PF01515 Phosphate acetyl/butaryl transferase MQE22_RS05290 PF00083 Sugar (and other) transporter MQE22_RS05295 PF01566 Natural resistance-associated macrophage protein MQE22_RS05300 PF00873 AcrB/AcrD/AcrF family MQE22_RS05305 PF13533 Biotin-lipoyl like MQE22_RS05315 PF00072 Response regulator receiver domain MQE22_RS05315 PF00486 Transcriptional regulatory protein, C terminal MQE22_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS05320 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS05320 PF00672 HAMP domain MQE22_RS05325 PF00083 Sugar (and other) transporter MQE22_RS05345 PF04264 YceI-like domain MQE22_RS05350 PF03358 NADPH-dependent FMN reductase MQE22_RS05365 PF00872 Transposase, Mutator family MQE22_RS05385 PF00872 Transposase, Mutator family MQE22_RS05410 PF00072 Response regulator receiver domain MQE22_RS05410 PF00486 Transcriptional regulatory protein, C terminal MQE22_RS05415 PF02702 Osmosensitive K+ channel His kinase sensor domain MQE22_RS05415 PF13493 Domain of unknown function (DUF4118) MQE22_RS05415 PF13492 GAF domain MQE22_RS05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS05415 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS05425 PF03814 Potassium-transporting ATPase A subunit MQE22_RS05435 PF02669 K+-transporting ATPase, c chain MQE22_RS05445 PF00696 Amino acid kinase family MQE22_RS05445 PF01472 PUA domain MQE22_RS05470 PF00149 Calcineurin-like phosphoesterase MQE22_RS05475 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS05475 PF05362 Lon protease (S16) C-terminal proteolytic domain MQE22_RS05475 PF02190 ATP-dependent protease La (LON) substrate-binding domain MQE22_RS05500 PF01597 Glycine cleavage H-protein MQE22_RS05515 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE22_RS05515 PF00970 Oxidoreductase FAD-binding domain MQE22_RS05515 PF00175 Oxidoreductase NAD-binding domain MQE22_RS05520 PF00970 Oxidoreductase FAD-binding domain MQE22_RS05520 PF00042 Globin MQE22_RS05520 PF00175 Oxidoreductase NAD-binding domain MQE22_RS05525 PF00027 Cyclic nucleotide-binding domain MQE22_RS05525 PF13545 Crp-like helix-turn-helix domain MQE22_RS05545 PF01609 Transposase DDE domain MQE22_RS05545 PF05598 Transposase domain (DUF772) MQE22_RS05550 PF03050 Transposase IS66 family MQE22_RS05550 PF13817 IS66 C-terminal element MQE22_RS05550 PF13007 Transposase C of IS166 homeodomain MQE22_RS05550 PF13005 zinc-finger binding domain of transposase IS66 MQE22_RS05560 PF00216 Bacterial DNA-binding protein MQE22_RS05565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MQE22_RS05570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MQE22_RS05570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MQE22_RS05570 PF00374 Nickel-dependent hydrogenase MQE22_RS05575 PF00361 Proton-conducting membrane transporter MQE22_RS05585 PF00146 NADH dehydrogenase MQE22_RS05590 PF00361 Proton-conducting membrane transporter MQE22_RS05600 PF00092 von Willebrand factor type A domain MQE22_RS05605 PF07728 AAA domain (dynein-related subfamily) MQE22_RS05605 PF08406 CbbQ/NirQ/NorQ C-terminal MQE22_RS05610 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain MQE22_RS05610 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain MQE22_RS05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS05615 PF03466 LysR substrate binding domain MQE22_RS05620 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase MQE22_RS05620 PF09363 XFP C-terminal domain MQE22_RS05620 PF09364 XFP N-terminal domain MQE22_RS05625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MQE22_RS05625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MQE22_RS05630 PF02896 PEP-utilising enzyme, TIM barrel domain MQE22_RS05630 PF00391 PEP-utilising enzyme, mobile domain MQE22_RS05630 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MQE22_RS05640 PF00391 PEP-utilising enzyme, mobile domain MQE22_RS05640 PF02896 PEP-utilising enzyme, TIM barrel domain MQE22_RS05640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MQE22_RS05655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MQE22_RS05655 PF02896 PEP-utilising enzyme, TIM barrel domain MQE22_RS05655 PF00391 PEP-utilising enzyme, mobile domain MQE22_RS05670 PF07690 Major Facilitator Superfamily MQE22_RS05680 PF13520 Amino acid permease MQE22_RS05685 PF00689 Cation transporting ATPase, C-terminus MQE22_RS05685 PF00690 Cation transporter/ATPase, N-terminus MQE22_RS05715 PF00325 Bacterial regulatory proteins, crp family MQE22_RS05715 PF00027 Cyclic nucleotide-binding domain MQE22_RS05735 PF01381 Helix-turn-helix MQE22_RS05735 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system MQE22_RS05740 PF13007 Transposase C of IS166 homeodomain MQE22_RS05740 PF03050 Transposase IS66 family MQE22_RS05740 PF13817 IS66 C-terminal element MQE22_RS05740 PF13005 zinc-finger binding domain of transposase IS66 MQE22_RS05755 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MQE22_RS05765 PF13086 AAA domain MQE22_RS05765 PF13087 AAA domain MQE22_RS05765 PF13195 Protein of unknown function (DUF4011) MQE22_RS05765 PF13087 AAA domain MQE22_RS05765 PF13086 AAA domain MQE22_RS05765 PF13195 Protein of unknown function (DUF4011) MQE22_RS05770 PF00589 Phage integrase family MQE22_RS05790 PF00510 Cytochrome c oxidase subunit III MQE22_RS05795 PF00115 Cytochrome C and Quinol oxidase polypeptide I MQE22_RS05800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MQE22_RS05800 PF06481 COX Aromatic Rich Motif MQE22_RS05810 PF00083 Sugar (and other) transporter MQE22_RS05830 PF01618 MotA/TolQ/ExbB proton channel family MQE22_RS05835 PF02472 Biopolymer transport protein ExbD/TolR MQE22_RS05850 PF04185 Phosphoesterase family MQE22_RS05860 PF00392 Bacterial regulatory proteins, gntR family MQE22_RS05860 PF07702 UTRA domain MQE22_RS05875 PF07969 Amidohydrolase family MQE22_RS05880 PF00005 ABC transporter MQE22_RS05885 PF00005 ABC transporter MQE22_RS05890 PF06007 Phosphonate metabolism protein PhnJ MQE22_RS05895 PF05861 Bacterial phosphonate metabolism protein (PhnI) MQE22_RS05915 PF14489 QueF-like protein MQE22_RS05920 PF02463 RecF/RecN/SMC N terminal domain MQE22_RS05920 PF06470 SMC proteins Flexible Hinge Domain MQE22_RS05930 PF07690 Major Facilitator Superfamily MQE22_RS05935 PF02609 Exonuclease VII small subunit MQE22_RS05940 PF00348 Polyprenyl synthetase MQE22_RS05945 PF02780 Transketolase, C-terminal domain MQE22_RS05945 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MQE22_RS05945 PF02779 Transketolase, pyrimidine binding domain MQE22_RS05950 PF02649 Type I GTP cyclohydrolase folE2 MQE22_RS05955 PF01264 Chorismate synthase MQE22_RS05960 PF12832 MFS_1 like family MQE22_RS05965 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS05965 PF07724 AAA domain (Cdc48 subfamily) MQE22_RS05965 PF17871 AAA lid domain MQE22_RS05965 PF02861 Clp amino terminal domain, pathogenicity island component MQE22_RS05965 PF10431 C-terminal, D2-small domain, of ClpB protein MQE22_RS05970 PF13098 Thioredoxin-like domain MQE22_RS05975 PF11940 Domain of unknown function (DUF3458) Ig-like fold MQE22_RS05975 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MQE22_RS05975 PF01433 Peptidase family M1 domain MQE22_RS05995 PF02503 Polyphosphate kinase middle domain MQE22_RS05995 PF13090 Polyphosphate kinase C-terminal domain 2 MQE22_RS05995 PF17941 Polyphosphate kinase C-terminal domain 1 MQE22_RS05995 PF13089 Polyphosphate kinase N-terminal domain MQE22_RS06000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MQE22_RS06000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MQE22_RS06005 PF00474 Sodium:solute symporter family MQE22_RS06010 PF11755 Protein of unknown function (DUF3311) MQE22_RS06015 PF04293 SpoVR like protein MQE22_RS06020 PF04285 Protein of unknown function (DUF444) MQE22_RS06025 PF08298 PrkA AAA domain MQE22_RS06025 PF06798 PrkA serine protein kinase C-terminal domain MQE22_RS06045 PF00005 ABC transporter MQE22_RS06050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS06060 PF01451 Low molecular weight phosphotyrosine protein phosphatase MQE22_RS06070 PF02040 Arsenical pump membrane protein MQE22_RS06085 PF12170 DNA polymerase III tau subunit V interacting with alpha MQE22_RS06085 PF12169 DNA polymerase III subunits gamma and tau domain III MQE22_RS06085 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MQE22_RS06090 PF02575 YbaB/EbfC DNA-binding family MQE22_RS06095 PF02132 RecR protein MQE22_RS06095 PF13662 Toprim domain MQE22_RS06100 PF00909 Ammonium Transporter Family MQE22_RS06105 PF03853 YjeF-related protein N-terminus MQE22_RS06105 PF01256 Carbohydrate kinase MQE22_RS06110 PF00202 Aminotransferase class-III MQE22_RS06115 PF03448 MgtE intracellular N domain MQE22_RS06115 PF01769 Divalent cation transporter MQE22_RS06115 PF00571 CBS domain MQE22_RS06120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MQE22_RS06125 PF08676 MutL C terminal dimerisation domain MQE22_RS06125 PF01119 DNA mismatch repair protein, C-terminal domain MQE22_RS06135 PF02321 Outer membrane efflux protein MQE22_RS06140 PF04632 Fusaric acid resistance protein family MQE22_RS06150 PF00529 HlyD membrane-fusion protein of T1SS MQE22_RS06150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS06155 PF00035 Double-stranded RNA binding motif MQE22_RS06155 PF14622 Ribonuclease-III-like MQE22_RS06160 PF01926 50S ribosome-binding GTPase MQE22_RS06160 PF07650 KH domain MQE22_RS06165 PF02565 Recombination protein O C terminal MQE22_RS06165 PF11967 Recombination protein O N terminal MQE22_RS06170 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MQE22_RS06175 PF01648 4'-phosphopantetheinyl transferase superfamily MQE22_RS06180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MQE22_RS06180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MQE22_RS06180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MQE22_RS06185 PF01467 Cytidylyltransferase-like MQE22_RS06185 PF00294 pfkB family carbohydrate kinase MQE22_RS06190 PF01171 PP-loop family MQE22_RS06195 PF01430 Hsp33 protein MQE22_RS06205 PF02321 Outer membrane efflux protein MQE22_RS06225 PF04715 Anthranilate synthase component I, N terminal region MQE22_RS06225 PF00425 chorismate binding enzyme MQE22_RS06235 PF00282 Pyridoxal-dependent decarboxylase conserved domain MQE22_RS06265 PF05114 Protein of unknown function (DUF692) MQE22_RS06280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS06280 PF03466 LysR substrate binding domain MQE22_RS06285 PF02678 Pirin MQE22_RS06285 PF05726 Pirin C-terminal cupin domain MQE22_RS06290 PF00857 Isochorismatase family MQE22_RS06295 PF03976 Polyphosphate kinase 2 (PPK2) MQE22_RS06300 PF01590 GAF domain MQE22_RS06300 PF00158 Sigma-54 interaction domain MQE22_RS06300 PF02954 Bacterial regulatory protein, Fis family MQE22_RS06330 PF00873 AcrB/AcrD/AcrF family MQE22_RS06355 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS06355 PF00563 EAL domain MQE22_RS06355 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS06360 PF00873 AcrB/AcrD/AcrF family MQE22_RS06365 PF13533 Biotin-lipoyl like MQE22_RS06375 PF00155 Aminotransferase class I and II MQE22_RS06385 PF04055 Radical SAM superfamily MQE22_RS06385 PF06969 HemN C-terminal domain MQE22_RS06395 PF00849 RNA pseudouridylate synthase MQE22_RS06395 PF01479 S4 domain MQE22_RS06415 PF13570 PQQ-like domain MQE22_RS06415 PF13360 PQQ-like domain MQE22_RS06415 PF01011 PQQ enzyme repeat MQE22_RS06430 PF01475 Ferric uptake regulator family MQE22_RS06435 PF01266 FAD dependent oxidoreductase MQE22_RS06445 PF01103 Surface antigen MQE22_RS06445 PF07244 Surface antigen variable number repeat MQE22_RS06445 PF17243 POTRA domain TamA domain 1 MQE22_RS06480 PF00581 Rhodanese-like domain MQE22_RS06480 PF00753 Metallo-beta-lactamase superfamily MQE22_RS06500 PF00664 ABC transporter transmembrane region MQE22_RS06500 PF00005 ABC transporter MQE22_RS06510 PF00106 short chain dehydrogenase MQE22_RS06515 PF03458 UPF0126 domain MQE22_RS06520 PF00717 Peptidase S24-like MQE22_RS06520 PF01726 LexA DNA binding domain MQE22_RS06535 PF01336 OB-fold nucleic acid binding domain MQE22_RS06535 PF02811 PHP domain MQE22_RS06535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MQE22_RS06535 PF07733 Bacterial DNA polymerase III alpha NTPase domain MQE22_RS06535 PF14579 Helix-hairpin-helix motif MQE22_RS06540 PF00324 Amino acid permease MQE22_RS06545 PF01619 Proline dehydrogenase MQE22_RS06545 PF14850 DNA-binding domain of Proline dehydrogenase MQE22_RS06545 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MQE22_RS06545 PF00171 Aldehyde dehydrogenase family MQE22_RS06550 PF13520 Amino acid permease MQE22_RS06555 PF00696 Amino acid kinase family MQE22_RS06555 PF01472 PUA domain MQE22_RS06560 PF12794 Mechanosensitive ion channel inner membrane domain 1 MQE22_RS06560 PF00924 Mechanosensitive ion channel MQE22_RS06560 PF12795 Mechanosensitive ion channel porin domain MQE22_RS06570 PF06508 Queuosine biosynthesis protein QueC MQE22_RS06575 PF01300 Telomere recombination MQE22_RS06580 PF02163 Peptidase family M50 MQE22_RS06585 PF00579 tRNA synthetases class I (W and Y) MQE22_RS06590 PF02616 Segregation and condensation protein ScpA MQE22_RS06595 PF04079 Segregation and condensation complex subunit ScpB MQE22_RS06600 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS06605 PF00849 RNA pseudouridylate synthase MQE22_RS06605 PF01479 S4 domain MQE22_RS06615 PF04356 Protein of unknown function (DUF489) MQE22_RS06620 PF01966 HD domain MQE22_RS06620 PF01909 Nucleotidyltransferase domain MQE22_RS06620 PF08335 GlnD PII-uridylyltransferase MQE22_RS06625 PF00557 Metallopeptidase family M24 MQE22_RS06630 PF03749 Sugar fermentation stimulation protein RE domain MQE22_RS06630 PF17746 SfsA N-terminal OB domain MQE22_RS06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS06635 PF03466 LysR substrate binding domain MQE22_RS06650 PF01258 Prokaryotic dksA/traR C4-type zinc finger MQE22_RS06655 PF13419 Haloacid dehalogenase-like hydrolase MQE22_RS06665 PF00578 AhpC/TSA family MQE22_RS06670 PF02562 PhoH-like protein MQE22_RS06670 PF13638 PIN domain MQE22_RS06675 PF17810 Arginine decarboxylase helical bundle domain MQE22_RS06675 PF17944 Arginine decarboxylase C-terminal helical extension MQE22_RS06675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MQE22_RS06680 PF01557 Fumarylacetoacetate (FAA) hydrolase family MQE22_RS06685 PF02080 TrkA-C domain MQE22_RS06685 PF02254 TrkA-N domain MQE22_RS06685 PF00999 Sodium/hydrogen exchanger family MQE22_RS06690 PF01370 NAD dependent epimerase/dehydratase family MQE22_RS06695 PF01370 NAD dependent epimerase/dehydratase family MQE22_RS06710 PF00034 Cytochrome c MQE22_RS06730 PF00877 NlpC/P60 family MQE22_RS06735 PF13406 Transglycosylase SLT domain MQE22_RS06740 PF01979 Amidohydrolase family MQE22_RS06750 PF13419 Haloacid dehalogenase-like hydrolase MQE22_RS06755 PF00892 EamA-like transporter family MQE22_RS06765 PF14602 Hexapeptide repeat of succinyl-transferase MQE22_RS06765 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MQE22_RS06765 PF00132 Bacterial transferase hexapeptide (six repeats) MQE22_RS06770 PF07687 Peptidase dimerisation domain MQE22_RS06770 PF01546 Peptidase family M20/M25/M40 MQE22_RS06785 PF00391 PEP-utilising enzyme, mobile domain MQE22_RS06785 PF02896 PEP-utilising enzyme, TIM barrel domain MQE22_RS06785 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MQE22_RS06790 PF01676 Metalloenzyme superfamily MQE22_RS06790 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MQE22_RS06800 PF00676 Dehydrogenase E1 component MQE22_RS06805 PF01548 Transposase MQE22_RS06805 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS06815 PF02780 Transketolase, C-terminal domain MQE22_RS06815 PF02779 Transketolase, pyrimidine binding domain MQE22_RS06820 PF02817 e3 binding domain MQE22_RS06820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MQE22_RS06820 PF00364 Biotin-requiring enzyme MQE22_RS06825 PF00871 Acetokinase family MQE22_RS06845 PF10544 T5orf172 domain MQE22_RS06865 PF01381 Helix-turn-helix MQE22_RS06870 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB MQE22_RS06875 PF17841 BID domain of Bartonella effector protein (Bep) MQE22_RS06875 PF03389 MobA/MobL family MQE22_RS06875 PF01443 Viral (Superfamily 1) RNA helicase MQE22_RS06990 PF05973 Phage derived protein Gp49-like (DUF891) MQE22_RS07020 PF13356 Arm DNA-binding domain MQE22_RS07020 PF14659 Phage integrase, N-terminal SAM-like domain MQE22_RS07020 PF00589 Phage integrase family MQE22_RS07025 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS07030 PF00561 alpha/beta hydrolase fold MQE22_RS07050 PF05114 Protein of unknown function (DUF692) MQE22_RS07085 PF00875 DNA photolyase MQE22_RS07085 PF03441 FAD binding domain of DNA photolyase MQE22_RS07110 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MQE22_RS07110 PF00271 Helicase conserved C-terminal domain MQE22_RS07110 PF08463 EcoEI R protein C-terminal MQE22_RS07110 PF04851 Type III restriction enzyme, res subunit MQE22_RS07120 PF05016 ParE toxin of type II toxin-antitoxin system, parDE MQE22_RS07125 PF01420 Type I restriction modification DNA specificity domain MQE22_RS07145 PF12161 HsdM N-terminal domain MQE22_RS07145 PF02384 N-6 DNA Methylase MQE22_RS07155 PF00310 Glutamine amidotransferases class-II MQE22_RS07155 PF04898 Glutamate synthase central domain MQE22_RS07155 PF01645 Conserved region in glutamate synthase MQE22_RS07155 PF01493 GXGXG motif MQE22_RS07160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MQE22_RS07160 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS07165 PF01208 Uroporphyrinogen decarboxylase (URO-D) MQE22_RS07170 PF01553 Acyltransferase MQE22_RS07180 PF00709 Adenylosuccinate synthetase MQE22_RS07185 PF13393 Histidyl-tRNA synthetase MQE22_RS07200 PF13167 GTP-binding GTPase N-terminal MQE22_RS07200 PF01926 50S ribosome-binding GTPase MQE22_RS07200 PF16360 GTP-binding GTPase Middle Region MQE22_RS07205 PF17209 Hfq protein MQE22_RS07210 PF00311 Phosphoenolpyruvate carboxylase MQE22_RS07215 PF02545 Maf-like protein MQE22_RS07220 PF00528 Binding-protein-dependent transport system inner membrane component MQE22_RS07225 PF00528 Binding-protein-dependent transport system inner membrane component MQE22_RS07230 PF12849 PBP superfamily domain MQE22_RS07250 PF00300 Histidine phosphatase superfamily (branch 1) MQE22_RS07260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MQE22_RS07260 PF01926 50S ribosome-binding GTPase MQE22_RS07265 PF13360 PQQ-like domain MQE22_RS07275 PF03129 Anticodon binding domain MQE22_RS07275 PF13393 Histidyl-tRNA synthetase MQE22_RS07280 PF04551 GcpE protein MQE22_RS07295 PF04055 Radical SAM superfamily MQE22_RS07300 PF00334 Nucleoside diphosphate kinase MQE22_RS07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS07315 PF00005 ABC transporter MQE22_RS07315 PF08402 TOBE domain MQE22_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component MQE22_RS07325 PF11734 TilS substrate C-terminal domain MQE22_RS07325 PF01171 PP-loop family MQE22_RS07325 PF09179 TilS substrate binding domain MQE22_RS07330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MQE22_RS07335 PF07733 Bacterial DNA polymerase III alpha NTPase domain MQE22_RS07335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MQE22_RS07335 PF14579 Helix-hairpin-helix motif MQE22_RS07335 PF02811 PHP domain MQE22_RS07335 PF01336 OB-fold nucleic acid binding domain MQE22_RS07340 PF01351 Ribonuclease HII MQE22_RS07345 PF02684 Lipid-A-disaccharide synthetase MQE22_RS07350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MQE22_RS07360 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MQE22_RS07360 PF00132 Bacterial transferase hexapeptide (six repeats) MQE22_RS07365 PF07977 FabA-like domain MQE22_RS07370 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MQE22_RS07370 PF00132 Bacterial transferase hexapeptide (six repeats) MQE22_RS07380 PF07244 Surface antigen variable number repeat MQE22_RS07380 PF01103 Surface antigen MQE22_RS07385 PF02163 Peptidase family M50 MQE22_RS07385 PF17820 PDZ domain MQE22_RS07390 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MQE22_RS07390 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MQE22_RS07390 PF13288 DXP reductoisomerase C-terminal domain MQE22_RS07400 PF01255 Putative undecaprenyl diphosphate synthase MQE22_RS07405 PF01765 Ribosome recycling factor MQE22_RS07410 PF00696 Amino acid kinase family MQE22_RS07415 PF00889 Elongation factor TS MQE22_RS07420 PF00318 Ribosomal protein S2 MQE22_RS07430 PF02541 Ppx/GppA phosphatase family MQE22_RS07435 PF01895 PhoU domain MQE22_RS07440 PF00005 ABC transporter MQE22_RS07445 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS07445 PF00989 PAS fold MQE22_RS07445 PF11808 Phosphate regulon sensor protein PhoR MQE22_RS07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS07450 PF00072 Response regulator receiver domain MQE22_RS07450 PF00486 Transcriptional regulatory protein, C terminal MQE22_RS07460 PF04384 Iron-sulphur cluster assembly MQE22_RS07465 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE22_RS07470 PF00012 Hsp70 protein MQE22_RS07480 PF01521 Iron-sulphur cluster biosynthesis MQE22_RS07485 PF01592 NifU-like N terminal domain MQE22_RS07490 PF00266 Aminotransferase class-V MQE22_RS07495 PF02082 Transcriptional regulator MQE22_RS07500 PF00132 Bacterial transferase hexapeptide (six repeats) MQE22_RS07505 PF00588 SpoU rRNA Methylase family MQE22_RS07510 PF00459 Inositol monophosphatase family MQE22_RS07520 PF04279 Intracellular septation protein A MQE22_RS07525 PF03795 YCII-related domain MQE22_RS07530 PF01722 BolA-like protein MQE22_RS07535 PF00696 Amino acid kinase family MQE22_RS07535 PF00583 Acetyltransferase (GNAT) family MQE22_RS07545 PF00920 Dehydratase family MQE22_RS07550 PF01594 AI-2E family transporter MQE22_RS07555 PF00390 Malic enzyme, N-terminal domain MQE22_RS07555 PF03949 Malic enzyme, NAD binding domain MQE22_RS07555 PF01515 Phosphate acetyl/butaryl transferase MQE22_RS07560 PF01197 Ribosomal protein L31 MQE22_RS07565 PF07497 Rho termination factor, RNA-binding domain MQE22_RS07565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MQE22_RS07565 PF07498 Rho termination factor, N-terminal domain MQE22_RS07570 PF00085 Thioredoxin MQE22_RS07575 PF05506 Domain of unknown function (DUF756) MQE22_RS07575 PF04185 Phosphoesterase family MQE22_RS07585 PF07694 5TMR of 5TMR-LYT MQE22_RS07585 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS07590 PF00563 EAL domain MQE22_RS07590 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS07590 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS07600 PF07963 Prokaryotic N-terminal methylation motif MQE22_RS07600 PF00114 Pilin (bacterial filament) MQE22_RS07615 PF04940 Sensors of blue-light using FAD MQE22_RS07615 PF00563 EAL domain MQE22_RS07645 PF07549 SecD/SecF GG Motif MQE22_RS07645 PF02355 Protein export membrane protein MQE22_RS07650 PF13721 SecD export protein N-terminal TM region MQE22_RS07650 PF07549 SecD/SecF GG Motif MQE22_RS07650 PF02355 Protein export membrane protein MQE22_RS07655 PF02699 Preprotein translocase subunit MQE22_RS07665 PF01702 Queuine tRNA-ribosyltransferase MQE22_RS07670 PF02547 Queuosine biosynthesis protein MQE22_RS07675 PF01595 Cyclin M transmembrane N-terminal domain MQE22_RS07675 PF03471 Transporter associated domain MQE22_RS07675 PF00571 CBS domain MQE22_RS07685 PF01053 Cys/Met metabolism PLP-dependent enzyme MQE22_RS07690 PF00156 Phosphoribosyl transferase domain MQE22_RS07700 PF08245 Mur ligase middle domain MQE22_RS07700 PF02875 Mur ligase family, glutamate ligase domain MQE22_RS07705 PF01039 Carboxyl transferase domain MQE22_RS07705 PF17848 Acetyl-coA carboxylase zinc finger domain MQE22_RS07710 PF00290 Tryptophan synthase alpha chain MQE22_RS07715 PF00291 Pyridoxal-phosphate dependent enzyme MQE22_RS07720 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MQE22_RS07725 PF01416 tRNA pseudouridine synthase MQE22_RS07735 PF02774 Semialdehyde dehydrogenase, dimerisation domain MQE22_RS07735 PF01118 Semialdehyde dehydrogenase, NAD binding domain MQE22_RS07740 PF00180 Isocitrate/isopropylmalate dehydrogenase MQE22_RS07750 PF12804 MobA-like NTP transferase domain MQE22_RS07755 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MQE22_RS07760 PF00994 Probable molybdopterin binding domain MQE22_RS07760 PF03454 MoeA C-terminal region (domain IV) MQE22_RS07760 PF03453 MoeA N-terminal region (domain I and II) MQE22_RS07765 PF13091 PLD-like domain MQE22_RS07770 PF00875 DNA photolyase MQE22_RS07770 PF03441 FAD binding domain of DNA photolyase MQE22_RS07780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MQE22_RS07780 PF03120 NAD-dependent DNA ligase OB-fold domain MQE22_RS07780 PF01653 NAD-dependent DNA ligase adenylation domain MQE22_RS07780 PF12826 Helix-hairpin-helix motif MQE22_RS07780 PF00533 BRCA1 C Terminus (BRCT) domain MQE22_RS07785 PF01027 Inhibitor of apoptosis-promoting Bax1 MQE22_RS07790 PF00488 MutS domain V MQE22_RS07790 PF05188 MutS domain II MQE22_RS07790 PF05192 MutS domain III MQE22_RS07790 PF01624 MutS domain I MQE22_RS07790 PF05190 MutS family domain IV MQE22_RS07815 PF02661 Fic/DOC family MQE22_RS07815 PF13784 Fic/DOC family N-terminal MQE22_RS07830 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MQE22_RS07845 PF00849 RNA pseudouridylate synthase MQE22_RS07845 PF01479 S4 domain MQE22_RS07850 PF00575 S1 RNA binding domain MQE22_RS07850 PF12111 Polyribonucleotide phosphorylase C terminal MQE22_RS07850 PF10150 Ribonuclease E/G family MQE22_RS07855 PF01451 Low molecular weight phosphotyrosine protein phosphatase MQE22_RS07860 PF01406 tRNA synthetases class I (C) catalytic domain MQE22_RS07860 PF09190 DALR domain MQE22_RS07865 PF00749 tRNA synthetases class I (E and Q), catalytic domain MQE22_RS07870 PF00905 Penicillin binding protein transpeptidase domain MQE22_RS07870 PF17092 Penicillin-binding protein OB-like domain MQE22_RS07870 PF00912 Transglycosylase MQE22_RS07875 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MQE22_RS07875 PF02769 AIR synthase related protein, C-terminal domain MQE22_RS07875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MQE22_RS07880 PF01259 SAICAR synthetase MQE22_RS07885 PF10397 Adenylosuccinate lyase C-terminus MQE22_RS07885 PF00206 Lyase MQE22_RS07895 PF00701 Dihydrodipicolinate synthetase family MQE22_RS07905 PF02321 Outer membrane efflux protein MQE22_RS07910 PF13533 Biotin-lipoyl like MQE22_RS07915 PF00873 AcrB/AcrD/AcrF family MQE22_RS07925 PF01757 Acyltransferase family MQE22_RS07930 PF01757 Acyltransferase family MQE22_RS07940 PF10518 TAT (twin-arginine translocation) pathway signal sequence MQE22_RS07940 PF07732 Multicopper oxidase MQE22_RS07940 PF07731 Multicopper oxidase MQE22_RS07940 PF00394 Multicopper oxidase MQE22_RS07965 PF08241 Methyltransferase domain MQE22_RS07975 PF07943 Penicillin-binding protein 5, C-terminal domain MQE22_RS07975 PF00768 D-alanyl-D-alanine carboxypeptidase MQE22_RS07980 PF07690 Major Facilitator Superfamily MQE22_RS07985 PF00916 Sulfate permease family MQE22_RS07985 PF01740 STAS domain MQE22_RS07995 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS08040 PF08241 Methyltransferase domain MQE22_RS08050 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS08055 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS08065 PF00535 Glycosyl transferase family 2 MQE22_RS08070 PF00535 Glycosyl transferase family 2 MQE22_RS08075 PF00535 Glycosyl transferase family 2 MQE22_RS08080 PF01943 Polysaccharide biosynthesis protein MQE22_RS08085 PF05685 Putative restriction endonuclease MQE22_RS08095 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ MQE22_RS08100 PF04221 RelB antitoxin MQE22_RS08130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MQE22_RS08145 PF00085 Thioredoxin MQE22_RS08150 PF02601 Exonuclease VII, large subunit MQE22_RS08150 PF13742 OB-fold nucleic acid binding domain MQE22_RS08165 PF13677 Membrane MotB of proton-channel complex MotA/MotB MQE22_RS08165 PF00691 OmpA family MQE22_RS08170 PF01618 MotA/TolQ/ExbB proton channel family MQE22_RS08185 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS08190 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS08195 PF03976 Polyphosphate kinase 2 (PPK2) MQE22_RS08200 PF00575 S1 RNA binding domain MQE22_RS08200 PF00773 RNB domain MQE22_RS08200 PF08206 Ribonuclease B OB domain MQE22_RS08200 PF08461 Ribonuclease R winged-helix domain MQE22_RS08200 PF17876 Cold shock domain MQE22_RS08215 PF03729 Short repeat of unknown function (DUF308) MQE22_RS08220 PF01312 FlhB HrpN YscU SpaS Family MQE22_RS08235 PF13145 PPIC-type PPIASE domain MQE22_RS08255 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS08255 PF05362 Lon protease (S16) C-terminal proteolytic domain MQE22_RS08255 PF02190 ATP-dependent protease La (LON) substrate-binding domain MQE22_RS08260 PF07724 AAA domain (Cdc48 subfamily) MQE22_RS08260 PF10431 C-terminal, D2-small domain, of ClpB protein MQE22_RS08260 PF06689 ClpX C4-type zinc finger MQE22_RS08265 PF00574 Clp protease MQE22_RS08270 PF05697 Bacterial trigger factor protein (TF) MQE22_RS08270 PF05698 Bacterial trigger factor protein (TF) C-terminus MQE22_RS08270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MQE22_RS08275 PF00156 Phosphoribosyl transferase domain MQE22_RS08280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MQE22_RS08285 PF18073 Rubredoxin metal binding domain MQE22_RS08290 PF00216 Bacterial DNA-binding protein MQE22_RS08295 PF00575 S1 RNA binding domain MQE22_RS08300 PF02224 Cytidylate kinase MQE22_RS08305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MQE22_RS08310 PF02153 Prephenate dehydrogenase MQE22_RS08315 PF00793 DAHP synthetase I family MQE22_RS08315 PF18152 DAHP synthase ferredoxin-like domain MQE22_RS08320 PF00155 Aminotransferase class I and II MQE22_RS08325 PF01842 ACT domain MQE22_RS08325 PF01817 Chorismate mutase type II MQE22_RS08325 PF00800 Prephenate dehydratase MQE22_RS08330 PF00266 Aminotransferase class-V MQE22_RS08335 PF03989 DNA gyrase C-terminal domain, beta-propeller MQE22_RS08335 PF00521 DNA gyrase/topoisomerase IV, subunit A MQE22_RS08340 PF01008 Initiation factor 2 subunit family MQE22_RS08345 PF10672 S-adenosylmethionine-dependent methyltransferase MQE22_RS08345 PF17785 PUA-like domain MQE22_RS08355 PF02195 ParB-like nuclease domain MQE22_RS08355 PF17762 HTH domain found in ParB protein MQE22_RS08360 PF13614 AAA domain MQE22_RS08375 PF03743 Bacterial conjugation TrbI-like protein MQE22_RS08420 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MQE22_RS08440 PF00437 Type II/IV secretion system protein MQE22_RS08450 PF11799 impB/mucB/samB family C-terminal domain MQE22_RS08450 PF00817 impB/mucB/samB family MQE22_RS08460 PF02583 Metal-sensitive transcriptional repressor MQE22_RS08470 PF00873 AcrB/AcrD/AcrF family MQE22_RS08510 PF02308 MgtC family MQE22_RS08525 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MQE22_RS08530 PF04264 YceI-like domain MQE22_RS08535 PF03358 NADPH-dependent FMN reductase MQE22_RS08540 PF01638 HxlR-like helix-turn-helix MQE22_RS08550 PF00403 Heavy-metal-associated domain MQE22_RS08550 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS08550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE22_RS08555 PF03203 MerC mercury resistance protein MQE22_RS08560 PF00376 MerR family regulatory protein MQE22_RS08560 PF09278 MerR, DNA binding MQE22_RS08590 PF01751 Toprim domain MQE22_RS08590 PF01131 DNA topoisomerase MQE22_RS08595 PF01548 Transposase MQE22_RS08595 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS08600 PF01751 Toprim domain MQE22_RS08600 PF01131 DNA topoisomerase MQE22_RS08640 PF01548 Transposase MQE22_RS08640 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS08670 PF00476 DNA polymerase family A MQE22_RS08670 PF01612 3'-5' exonuclease MQE22_RS08680 PF00436 Single-strand binding protein family MQE22_RS08695 PF01548 Transposase MQE22_RS08695 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS08775 PF08401 Domain of unknown function (DUF1738) MQE22_RS08775 PF18818 Metallopeptidase superfamily domain MQE22_RS08775 PF13362 Toprim domain MQE22_RS08815 PF01464 Transglycosylase SLT domain MQE22_RS08820 PF02534 Type IV secretory system Conjugative DNA transfer MQE22_RS08850 PF00271 Helicase conserved C-terminal domain MQE22_RS08850 PF00176 SNF2 family N-terminal domain MQE22_RS08855 PF00589 Phage integrase family MQE22_RS08905 PF17862 AAA+ lid domain MQE22_RS08905 PF01434 Peptidase family M41 MQE22_RS08905 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS08905 PF06480 FtsH Extracellular MQE22_RS08955 PF01551 Peptidase family M23 MQE22_RS08955 PF10145 Phage-related minor tail protein MQE22_RS08955 PF01464 Transglycosylase SLT domain MQE22_RS09020 PF02222 ATP-grasp domain MQE22_RS09025 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MQE22_RS09025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MQE22_RS09030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MQE22_RS09030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MQE22_RS09040 PF00672 HAMP domain MQE22_RS09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS09040 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS09050 PF01654 Cytochrome bd terminal oxidase subunit I MQE22_RS09055 PF02322 Cytochrome bd terminal oxidase subunit II MQE22_RS09065 PF00999 Sodium/hydrogen exchanger family MQE22_RS09080 PF02678 Pirin MQE22_RS09080 PF05726 Pirin C-terminal cupin domain MQE22_RS09085 PF03358 NADPH-dependent FMN reductase MQE22_RS09095 PF05724 Thiopurine S-methyltransferase (TPMT) MQE22_RS09100 PF00563 EAL domain MQE22_RS09100 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS09100 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS09105 PF00072 Response regulator receiver domain MQE22_RS09105 PF00486 Transcriptional regulatory protein, C terminal MQE22_RS09110 PF00072 Response regulator receiver domain MQE22_RS09110 PF09308 LuxQ, periplasmic MQE22_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS09110 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS09120 PF07694 5TMR of 5TMR-LYT MQE22_RS09120 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS09125 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MQE22_RS09130 PF01850 PIN domain MQE22_RS09140 PF00873 AcrB/AcrD/AcrF family MQE22_RS09165 PF00486 Transcriptional regulatory protein, C terminal MQE22_RS09165 PF00072 Response regulator receiver domain MQE22_RS09170 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS09170 PF08521 Two-component sensor kinase N-terminal MQE22_RS09185 PF00873 AcrB/AcrD/AcrF family MQE22_RS09200 PF00535 Glycosyl transferase family 2 MQE22_RS09205 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MQE22_RS09215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MQE22_RS09245 PF00585 C-terminal regulatory domain of Threonine dehydratase MQE22_RS09245 PF00291 Pyridoxal-phosphate dependent enzyme MQE22_RS09260 PF00034 Cytochrome c MQE22_RS09260 PF03150 Di-haem cytochrome c peroxidase MQE22_RS09320 PF09115 DNA polymerase III, delta subunit, C terminal MQE22_RS09325 PF02223 Thymidylate kinase MQE22_RS09330 PF02618 YceG-like family MQE22_RS09340 PF02801 Beta-ketoacyl synthase, C-terminal domain MQE22_RS09340 PF00109 Beta-ketoacyl synthase, N-terminal domain MQE22_RS09345 PF00550 Phosphopantetheine attachment site MQE22_RS09355 PF00698 Acyl transferase domain MQE22_RS09360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MQE22_RS09360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MQE22_RS09365 PF02504 Fatty acid synthesis protein MQE22_RS09370 PF01783 Ribosomal L32p protein family MQE22_RS09380 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MQE22_RS09380 PF00117 Glutamine amidotransferase class-I MQE22_RS09385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MQE22_RS09385 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MQE22_RS09385 PF02142 MGS-like domain MQE22_RS09390 PF03449 Transcription elongation factor, N-terminal MQE22_RS09390 PF01272 Transcription elongation factor, GreA/GreB, C-term MQE22_RS09395 PF02673 Bacitracin resistance protein BacA MQE22_RS09400 PF07690 Major Facilitator Superfamily MQE22_RS09405 PF01040 UbiA prenyltransferase family MQE22_RS09420 PF00510 Cytochrome c oxidase subunit III MQE22_RS09425 PF00115 Cytochrome C and Quinol oxidase polypeptide I MQE22_RS09430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MQE22_RS09430 PF06481 COX Aromatic Rich Motif MQE22_RS09440 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MQE22_RS09445 PF01243 Pyridoxamine 5'-phosphate oxidase MQE22_RS09445 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MQE22_RS09455 PF00694 Aconitase C-terminal domain MQE22_RS09465 PF00330 Aconitase family (aconitate hydratase) MQE22_RS09470 PF01523 Putative modulator of DNA gyrase MQE22_RS09480 PF00543 Nitrogen regulatory protein P-II MQE22_RS09485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MQE22_RS09485 PF00117 Glutamine amidotransferase class-I MQE22_RS09490 PF00909 Ammonium Transporter Family MQE22_RS09495 PF00543 Nitrogen regulatory protein P-II MQE22_RS09505 PF03951 Glutamine synthetase, beta-Grasp domain MQE22_RS09505 PF00120 Glutamine synthetase, catalytic domain MQE22_RS09510 PF02954 Bacterial regulatory protein, Fis family MQE22_RS09510 PF00072 Response regulator receiver domain MQE22_RS09510 PF00158 Sigma-54 interaction domain MQE22_RS09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS09515 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS09515 PF00989 PAS fold MQE22_RS09550 PF14403 Circularly permuted ATP-grasp type 2 MQE22_RS09565 PF00909 Ammonium Transporter Family MQE22_RS09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS09570 PF00183 Hsp90 protein MQE22_RS09575 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS09575 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS09575 PF00563 EAL domain MQE22_RS09580 PF01339 CheB methylesterase MQE22_RS09580 PF00072 Response regulator receiver domain MQE22_RS09585 PF03975 CheD chemotactic sensory transduction MQE22_RS09590 PF01739 CheR methyltransferase, SAM binding domain MQE22_RS09590 PF03705 CheR methyltransferase, all-alpha domain MQE22_RS09595 PF01584 CheW-like domain MQE22_RS09600 PF16591 Helical bimodular sensor domain MQE22_RS09600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MQE22_RS09600 PF00672 HAMP domain MQE22_RS09605 PF01627 Hpt domain MQE22_RS09605 PF01584 CheW-like domain MQE22_RS09605 PF09078 CheY binding MQE22_RS09605 PF02895 Signal transducing histidine kinase, homodimeric domain MQE22_RS09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS09615 PF00072 Response regulator receiver domain MQE22_RS09620 PF08447 PAS fold MQE22_RS09620 PF13426 PAS domain MQE22_RS09620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MQE22_RS09625 PF01654 Cytochrome bd terminal oxidase subunit I MQE22_RS09650 PF13005 zinc-finger binding domain of transposase IS66 MQE22_RS09650 PF03050 Transposase IS66 family MQE22_RS09650 PF13817 IS66 C-terminal element MQE22_RS09650 PF13007 Transposase C of IS166 homeodomain MQE22_RS09685 PF01266 FAD dependent oxidoreductase MQE22_RS09690 PF01427 D-ala-D-ala dipeptidase MQE22_RS09705 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS09705 PF01548 Transposase MQE22_RS09735 PF01728 FtsJ-like methyltransferase MQE22_RS09740 PF01985 CRS1 / YhbY (CRM) domain MQE22_RS09745 PF08264 Anticodon-binding domain of tRNA MQE22_RS09745 PF00133 tRNA synthetases class I (I, L, M and V) MQE22_RS09745 PF13603 Leucyl-tRNA synthetase, Domain 2 MQE22_RS09755 PF14840 Processivity clamp loader gamma complex DNA pol III C-term MQE22_RS09755 PF06144 DNA polymerase III, delta subunit MQE22_RS09760 PF00171 Aldehyde dehydrogenase family MQE22_RS09765 PF02237 Biotin protein ligase C terminal domain MQE22_RS09765 PF03099 Biotin/lipoate A/B protein ligase family MQE22_RS09765 PF08279 HTH domain MQE22_RS09770 PF03309 Type III pantothenate kinase MQE22_RS09780 PF00557 Metallopeptidase family M24 MQE22_RS09780 PF05195 Aminopeptidase P, N-terminal domain MQE22_RS09795 PF01588 Putative tRNA binding domain MQE22_RS09795 PF09334 tRNA synthetases class I (M) MQE22_RS09810 PF10417 C-terminal domain of 1-Cys peroxiredoxin MQE22_RS09810 PF00578 AhpC/TSA family MQE22_RS09815 PF01817 Chorismate mutase type II MQE22_RS09815 PF00793 DAHP synthetase I family MQE22_RS09820 PF00206 Lyase MQE22_RS09820 PF10415 Fumarase C C-terminus MQE22_RS09825 PF08439 Oligopeptidase F MQE22_RS09825 PF01432 Peptidase family M3 MQE22_RS09850 PF04362 Bacterial Fe(2+) trafficking MQE22_RS09855 PF14815 NUDIX domain MQE22_RS09855 PF10576 Iron-sulfur binding domain of endonuclease III MQE22_RS09855 PF00633 Helix-hairpin-helix motif MQE22_RS09855 PF00730 HhH-GPD superfamily base excision DNA repair protein MQE22_RS09865 PF05524 PEP-utilising enzyme, N-terminal MQE22_RS09865 PF00391 PEP-utilising enzyme, mobile domain MQE22_RS09865 PF02896 PEP-utilising enzyme, TIM barrel domain MQE22_RS09870 PF00381 PTS HPr component phosphorylation site MQE22_RS09880 PF01513 ATP-NAD kinase MQE22_RS09885 PF02463 RecF/RecN/SMC N terminal domain MQE22_RS09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS09895 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS09905 PF00072 Response regulator receiver domain MQE22_RS09905 PF00158 Sigma-54 interaction domain MQE22_RS09915 PF00483 Nucleotidyl transferase MQE22_RS09935 PF00534 Glycosyl transferases group 1 MQE22_RS09935 PF08323 Starch synthase catalytic domain MQE22_RS09940 PF10996 Beta-Casp domain MQE22_RS09940 PF00753 Metallo-beta-lactamase superfamily MQE22_RS09940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MQE22_RS09950 PF10576 Iron-sulfur binding domain of endonuclease III MQE22_RS09950 PF00633 Helix-hairpin-helix motif MQE22_RS09950 PF00730 HhH-GPD superfamily base excision DNA repair protein MQE22_RS09960 PF03734 L,D-transpeptidase catalytic domain MQE22_RS09960 PF01476 LysM domain MQE22_RS09960 PF17969 L,D-transpeptidase C-terminal domain MQE22_RS09980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MQE22_RS09985 PF00149 Calcineurin-like phosphoesterase MQE22_RS10000 PF00005 ABC transporter MQE22_RS10000 PF12704 MacB-like periplasmic core domain MQE22_RS10000 PF02687 FtsX-like permease family MQE22_RS10010 PF13533 Biotin-lipoyl like MQE22_RS10015 PF00440 Bacterial regulatory proteins, tetR family MQE22_RS10020 PF13545 Crp-like helix-turn-helix domain MQE22_RS10020 PF00027 Cyclic nucleotide-binding domain MQE22_RS10025 PF00175 Oxidoreductase NAD-binding domain MQE22_RS10025 PF00042 Globin MQE22_RS10025 PF00970 Oxidoreductase FAD-binding domain MQE22_RS10030 PF00175 Oxidoreductase NAD-binding domain MQE22_RS10030 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE22_RS10030 PF00970 Oxidoreductase FAD-binding domain MQE22_RS10045 PF04343 Protein of unknown function, DUF488 MQE22_RS10050 PF00529 HlyD membrane-fusion protein of T1SS MQE22_RS10050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS10055 PF02321 Outer membrane efflux protein MQE22_RS10060 PF07690 Major Facilitator Superfamily MQE22_RS10065 PF03861 ANTAR domain MQE22_RS10065 PF08376 Nitrate and nitrite sensing MQE22_RS10075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MQE22_RS10075 PF10414 Sirohaem synthase dimerisation region MQE22_RS10080 PF00591 Glycosyl transferase family, a/b domain MQE22_RS10080 PF02885 Glycosyl transferase family, helical bundle domain MQE22_RS10085 PF01568 Molydopterin dinucleotide binding domain MQE22_RS10085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MQE22_RS10085 PF00384 Molybdopterin oxidoreductase MQE22_RS10090 PF00355 Rieske [2Fe-2S] domain MQE22_RS10095 PF04324 BFD-like [2Fe-2S] binding domain MQE22_RS10095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MQE22_RS10095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MQE22_RS10095 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS10095 PF18267 Rubredoxin NAD+ reductase C-terminal domain MQE22_RS10105 PF07690 Major Facilitator Superfamily MQE22_RS10110 PF00005 ABC transporter MQE22_RS10115 PF03167 Uracil DNA glycosylase superfamily MQE22_RS10120 PF03466 LysR substrate binding domain MQE22_RS10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS10125 PF13840 ACT domain MQE22_RS10125 PF01842 ACT domain MQE22_RS10125 PF00696 Amino acid kinase family MQE22_RS10130 PF00202 Aminotransferase class-III MQE22_RS10135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MQE22_RS10135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MQE22_RS10140 PF00764 Arginosuccinate synthase MQE22_RS10145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MQE22_RS10150 PF00929 Exonuclease MQE22_RS10155 PF00075 RNase H MQE22_RS10160 PF01209 ubiE/COQ5 methyltransferase family MQE22_RS10165 PF16123 Hydroxyacylglutathione hydrolase C-terminus MQE22_RS10165 PF00753 Metallo-beta-lactamase superfamily MQE22_RS10170 PF00675 Insulinase (Peptidase family M16) MQE22_RS10170 PF05193 Peptidase M16 inactive domain MQE22_RS10175 PF00575 S1 RNA binding domain MQE22_RS10175 PF03725 3' exoribonuclease family, domain 2 MQE22_RS10175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MQE22_RS10175 PF00013 KH domain MQE22_RS10175 PF01138 3' exoribonuclease family, domain 1 MQE22_RS10180 PF00312 Ribosomal protein S15 MQE22_RS10185 PF09157 Pseudouridine synthase II TruB, C-terminal MQE22_RS10185 PF16198 tRNA pseudouridylate synthase B C-terminal domain MQE22_RS10185 PF01509 TruB family pseudouridylate synthase (N terminal domain) MQE22_RS10190 PF02033 Ribosome-binding factor A MQE22_RS10195 PF00009 Elongation factor Tu GTP binding domain MQE22_RS10195 PF11987 Translation-initiation factor 2 MQE22_RS10195 PF08364 Bacterial translation initiation factor IF-2 associated region MQE22_RS10195 PF04760 Translation initiation factor IF-2, N-terminal region MQE22_RS10200 PF13184 NusA-like KH domain MQE22_RS10200 PF08529 NusA N-terminal domain MQE22_RS10205 PF17384 RimP C-terminal SH3 domain MQE22_RS10205 PF02576 RimP N-terminal domain MQE22_RS10240 PF03734 L,D-transpeptidase catalytic domain MQE22_RS10240 PF17969 L,D-transpeptidase C-terminal domain MQE22_RS10240 PF01476 LysM domain MQE22_RS10250 PF02403 Seryl-tRNA synthetase N-terminal domain MQE22_RS10250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MQE22_RS10255 PF16193 AAA C-terminal domain MQE22_RS10255 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS10255 PF12002 MgsA AAA+ ATPase C terminal MQE22_RS10265 PF03548 Outer membrane lipoprotein carrier protein LolA MQE22_RS10270 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MQE22_RS10270 PF17854 FtsK alpha domain MQE22_RS10270 PF09397 Ftsk gamma domain MQE22_RS10270 PF01580 FtsK/SpoIIIE family MQE22_RS10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS10285 PF13411 MerR HTH family regulatory protein MQE22_RS10290 PF01142 tRNA pseudouridine synthase D (TruD) MQE22_RS10295 PF02542 YgbB family MQE22_RS10300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MQE22_RS10305 PF00271 Helicase conserved C-terminal domain MQE22_RS10305 PF03461 TRCF domain MQE22_RS10305 PF17757 UvrB interaction domain MQE22_RS10305 PF02559 CarD-like/TRCF domain MQE22_RS10305 PF00270 DEAD/DEAH box helicase MQE22_RS10315 PF00462 Glutaredoxin MQE22_RS10315 PF08534 Redoxin MQE22_RS10320 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS10320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE22_RS10325 PF01048 Phosphorylase superfamily MQE22_RS10330 PF00156 Phosphoribosyl transferase domain MQE22_RS10350 PF01219 Prokaryotic diacylglycerol kinase MQE22_RS10355 PF04002 RadC-like JAB domain MQE22_RS10360 PF02441 Flavoprotein MQE22_RS10360 PF04127 DNA / pantothenate metabolism flavoprotein MQE22_RS10365 PF00692 dUTPase MQE22_RS10375 PF00692 dUTPase MQE22_RS10380 PF10609 NUBPL iron-transfer P-loop NTPase MQE22_RS10390 PF05173 Dihydrodipicolinate reductase, C-terminus MQE22_RS10390 PF01113 Dihydrodipicolinate reductase, N-terminus MQE22_RS10395 PF00226 DnaJ domain MQE22_RS10395 PF01556 DnaJ C terminal domain MQE22_RS10395 PF00684 DnaJ central domain MQE22_RS10400 PF00012 Hsp70 protein MQE22_RS10405 PF01025 GrpE MQE22_RS10410 PF01628 HrcA protein C terminal domain MQE22_RS10415 PF00471 Ribosomal protein L33 MQE22_RS10420 PF00830 Ribosomal L28 family MQE22_RS10425 PF13520 Amino acid permease MQE22_RS10455 PF00258 Flavodoxin MQE22_RS10455 PF00175 Oxidoreductase NAD-binding domain MQE22_RS10455 PF00667 FAD binding domain MQE22_RS10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS10460 PF03466 LysR substrate binding domain MQE22_RS10465 PF00355 Rieske [2Fe-2S] domain MQE22_RS10470 PF00301 Rubredoxin MQE22_RS10480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MQE22_RS10490 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MQE22_RS10495 PF01979 Amidohydrolase family MQE22_RS10500 PF01180 Dihydroorotate dehydrogenase MQE22_RS10505 PF13247 4Fe-4S dicluster domain MQE22_RS10505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MQE22_RS10505 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS10510 PF00795 Carbon-nitrogen hydrolase MQE22_RS10515 PF00202 Aminotransferase class-III MQE22_RS10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS10525 PF03466 LysR substrate binding domain MQE22_RS10540 PF01425 Amidase MQE22_RS10550 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) MQE22_RS10565 PF00962 Adenosine/AMP deaminase MQE22_RS10585 PF02472 Biopolymer transport protein ExbD/TolR MQE22_RS10590 PF01618 MotA/TolQ/ExbB proton channel family MQE22_RS10615 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MQE22_RS10655 PF03073 TspO/MBR family MQE22_RS10660 PF00881 Nitroreductase family MQE22_RS10680 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MQE22_RS10705 PF00989 PAS fold MQE22_RS10715 PF01593 Flavin containing amine oxidoreductase MQE22_RS10725 PF00106 short chain dehydrogenase MQE22_RS10740 PF16363 GDP-mannose 4,6 dehydratase MQE22_RS10745 PF04321 RmlD substrate binding domain MQE22_RS10750 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MQE22_RS10755 PF00483 Nucleotidyl transferase MQE22_RS10770 PF00528 Binding-protein-dependent transport system inner membrane component MQE22_RS10780 PF00005 ABC transporter MQE22_RS10780 PF08402 TOBE domain MQE22_RS10800 PF00691 OmpA family MQE22_RS10815 PF13411 MerR HTH family regulatory protein MQE22_RS10820 PF00216 Bacterial DNA-binding protein MQE22_RS10825 PF03483 B3/4 domain MQE22_RS10825 PF03484 tRNA synthetase B5 domain MQE22_RS10825 PF03147 Ferredoxin-fold anticodon binding domain MQE22_RS10825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MQE22_RS10825 PF01588 Putative tRNA binding domain MQE22_RS10830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MQE22_RS10830 PF01409 tRNA synthetases class II core domain (F) MQE22_RS10835 PF00453 Ribosomal protein L20 MQE22_RS10840 PF01632 Ribosomal protein L35 MQE22_RS10845 PF00707 Translation initiation factor IF-3, C-terminal domain MQE22_RS10845 PF05198 Translation initiation factor IF-3, N-terminal domain MQE22_RS10850 PF03129 Anticodon binding domain MQE22_RS10850 PF02824 TGS domain MQE22_RS10850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MQE22_RS10850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MQE22_RS10865 PF00361 Proton-conducting membrane transporter MQE22_RS10870 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus MQE22_RS10870 PF00361 Proton-conducting membrane transporter MQE22_RS10875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MQE22_RS10875 PF00361 Proton-conducting membrane transporter MQE22_RS10880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MQE22_RS10885 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MQE22_RS10890 PF12838 4Fe-4S dicluster domain MQE22_RS10895 PF00146 NADH dehydrogenase MQE22_RS10900 PF00384 Molybdopterin oxidoreductase MQE22_RS10900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MQE22_RS10900 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal MQE22_RS10905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MQE22_RS10905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MQE22_RS10905 PF10531 SLBB domain MQE22_RS10915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MQE22_RS10920 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MQE22_RS10925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MQE22_RS10930 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MQE22_RS10940 PF03840 Preprotein translocase SecG subunit MQE22_RS10945 PF00121 Triosephosphate isomerase MQE22_RS10950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MQE22_RS10950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MQE22_RS10950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MQE22_RS10950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MQE22_RS10955 PF00809 Pterin binding enzyme MQE22_RS10960 PF06480 FtsH Extracellular MQE22_RS10960 PF01434 Peptidase family M41 MQE22_RS10960 PF00004 ATPase family associated with various cellular activities (AAA) MQE22_RS10960 PF17862 AAA+ lid domain MQE22_RS10965 PF01523 Putative modulator of DNA gyrase MQE22_RS10970 PF03477 ATP cone domain MQE22_RS10970 PF02867 Ribonucleotide reductase, barrel domain MQE22_RS10970 PF00317 Ribonucleotide reductase, all-alpha domain MQE22_RS10975 PF00268 Ribonucleotide reductase, small chain MQE22_RS10985 PF00561 alpha/beta hydrolase fold MQE22_RS10990 PF00561 alpha/beta hydrolase fold MQE22_RS10990 PF07021 Methionine biosynthesis protein MetW MQE22_RS11000 PF01209 ubiE/COQ5 methyltransferase family MQE22_RS11005 PF01717 Cobalamin-independent synthase, Catalytic domain MQE22_RS11005 PF08267 Cobalamin-independent synthase, N-terminal domain MQE22_RS11010 PF01740 STAS domain MQE22_RS11010 PF00916 Sulfate permease family MQE22_RS11040 PF03330 Lytic transglycolase MQE22_RS11040 PF05036 Sporulation related domain MQE22_RS11045 PF02254 TrkA-N domain MQE22_RS11045 PF07885 Ion channel MQE22_RS11050 PF03717 Penicillin-binding Protein dimerisation domain MQE22_RS11050 PF00905 Penicillin binding protein transpeptidase domain MQE22_RS11055 PF13180 PDZ domain MQE22_RS11060 PF07943 Penicillin-binding protein 5, C-terminal domain MQE22_RS11060 PF00768 D-alanyl-D-alanine carboxypeptidase MQE22_RS11070 PF00829 Ribosomal prokaryotic L21 protein MQE22_RS11075 PF01016 Ribosomal L27 protein MQE22_RS11080 PF01018 GTP1/OBG MQE22_RS11080 PF01926 50S ribosome-binding GTPase MQE22_RS11085 PF00696 Amino acid kinase family MQE22_RS11085 PF01472 PUA domain MQE22_RS11090 PF01545 Cation efflux family MQE22_RS11090 PF16916 Dimerisation domain of Zinc Transporter MQE22_RS11095 PF01435 Peptidase family M48 MQE22_RS11100 PF01475 Ferric uptake regulator family MQE22_RS11105 PF04355 SmpA / OmlA family MQE22_RS11110 PF03364 Polyketide cyclase / dehydrase and lipid transport MQE22_RS11115 PF13091 PLD-like domain MQE22_RS11115 PF13396 Phospholipase_D-nuclease N-terminal MQE22_RS11120 PF01668 SmpB protein MQE22_RS11130 PF13098 Thioredoxin-like domain MQE22_RS11135 PF02600 Disulfide bond formation protein DsbB MQE22_RS11140 PF03881 Fructosamine kinase MQE22_RS11145 PF02222 ATP-grasp domain MQE22_RS11145 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MQE22_RS11150 PF00731 AIR carboxylase MQE22_RS11155 PF02390 Putative methyltransferase MQE22_RS11160 PF13545 Crp-like helix-turn-helix domain MQE22_RS11160 PF00027 Cyclic nucleotide-binding domain MQE22_RS11175 PF00535 Glycosyl transferase family 2 MQE22_RS11180 PF00437 Type II/IV secretion system protein MQE22_RS11185 PF00437 Type II/IV secretion system protein MQE22_RS11190 PF01168 Alanine racemase, N-terminal domain MQE22_RS11195 PF03807 NADP oxidoreductase coenzyme F420-dependent MQE22_RS11195 PF14748 Pyrroline-5-carboxylate reductase dimerisation MQE22_RS11200 PF02325 YGGT family MQE22_RS11205 PF06968 Biotin and Thiamin Synthesis associated domain MQE22_RS11205 PF04055 Radical SAM superfamily MQE22_RS11215 PF00529 HlyD membrane-fusion protein of T1SS MQE22_RS11215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS11225 PF00696 Amino acid kinase family MQE22_RS11230 PF16859 Tetracyclin repressor-like, C-terminal domain MQE22_RS11230 PF00440 Bacterial regulatory proteins, tetR family MQE22_RS11250 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE22_RS11250 PF00970 Oxidoreductase FAD-binding domain MQE22_RS11250 PF00175 Oxidoreductase NAD-binding domain MQE22_RS11255 PF00929 Exonuclease MQE22_RS11260 PF03649 Uncharacterised protein family (UPF0014) MQE22_RS11280 PF13614 AAA domain MQE22_RS11300 PF05717 IS66 Orf2 like protein MQE22_RS11325 PF01435 Peptidase family M48 MQE22_RS11335 PF08241 Methyltransferase domain MQE22_RS11340 PF00561 alpha/beta hydrolase fold MQE22_RS11345 PF00155 Aminotransferase class I and II MQE22_RS11350 PF00156 Phosphoribosyl transferase domain MQE22_RS11355 PF00588 SpoU rRNA Methylase family MQE22_RS11360 PF07690 Major Facilitator Superfamily MQE22_RS11365 PF03781 Sulfatase-modifying factor enzyme 1 MQE22_RS11365 PF12867 DinB superfamily MQE22_RS11370 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MQE22_RS11380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MQE22_RS11385 PF00535 Glycosyl transferase family 2 MQE22_RS11405 PF00534 Glycosyl transferases group 1 MQE22_RS11405 PF13439 Glycosyltransferase Family 4 MQE22_RS11415 PF00535 Glycosyl transferase family 2 MQE22_RS11420 PF00293 NUDIX domain MQE22_RS11425 PF01960 ArgJ family MQE22_RS11430 PF02810 SEC-C motif MQE22_RS11430 PF07517 SecA DEAD-like domain MQE22_RS11430 PF01043 SecA preprotein cross-linking domain MQE22_RS11430 PF07516 SecA Wing and Scaffold domain MQE22_RS11440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MQE22_RS11445 PF00043 Glutathione S-transferase, C-terminal domain MQE22_RS11445 PF02798 Glutathione S-transferase, N-terminal domain MQE22_RS11450 PF00501 AMP-binding enzyme MQE22_RS11465 PF02381 MraZ protein, putative antitoxin-like MQE22_RS11470 PF01795 MraW methylase family MQE22_RS11480 PF03717 Penicillin-binding Protein dimerisation domain MQE22_RS11480 PF00905 Penicillin binding protein transpeptidase domain MQE22_RS11485 PF01225 Mur ligase family, catalytic domain MQE22_RS11485 PF02875 Mur ligase family, glutamate ligase domain MQE22_RS11485 PF08245 Mur ligase middle domain MQE22_RS11490 PF01225 Mur ligase family, catalytic domain MQE22_RS11490 PF02875 Mur ligase family, glutamate ligase domain MQE22_RS11490 PF08245 Mur ligase middle domain MQE22_RS11495 PF00953 Glycosyl transferase family 4 MQE22_RS11495 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MQE22_RS11500 PF08245 Mur ligase middle domain MQE22_RS11500 PF02875 Mur ligase family, glutamate ligase domain MQE22_RS11505 PF01098 Cell cycle protein MQE22_RS11510 PF04101 Glycosyltransferase family 28 C-terminal domain MQE22_RS11510 PF03033 Glycosyltransferase family 28 N-terminal domain MQE22_RS11515 PF01225 Mur ligase family, catalytic domain MQE22_RS11515 PF02875 Mur ligase family, glutamate ligase domain MQE22_RS11515 PF08245 Mur ligase middle domain MQE22_RS11520 PF01565 FAD binding domain MQE22_RS11520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MQE22_RS11525 PF07478 D-ala D-ala ligase C-terminus MQE22_RS11525 PF01820 D-ala D-ala ligase N-terminus MQE22_RS11530 PF03799 Cell division protein FtsQ MQE22_RS11530 PF08478 POTRA domain, FtsQ-type MQE22_RS11535 PF02491 SHS2 domain inserted in FTSA MQE22_RS11540 PF00091 Tubulin/FtsZ family, GTPase domain MQE22_RS11540 PF12327 FtsZ family, C-terminal domain MQE22_RS11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS11560 PF03466 LysR substrate binding domain MQE22_RS11565 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) MQE22_RS11570 PF00361 Proton-conducting membrane transporter MQE22_RS11570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MQE22_RS11575 PF06736 Protein of unknown function (DUF1211) MQE22_RS11585 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MQE22_RS11590 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MQE22_RS11590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MQE22_RS11590 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MQE22_RS11595 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MQE22_RS11595 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MQE22_RS11605 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MQE22_RS11605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MQE22_RS11605 PF10531 SLBB domain MQE22_RS11610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MQE22_RS11610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MQE22_RS11610 PF00384 Molybdopterin oxidoreductase MQE22_RS11615 PF00146 NADH dehydrogenase MQE22_RS11620 PF12838 4Fe-4S dicluster domain MQE22_RS11625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MQE22_RS11630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MQE22_RS11635 PF00361 Proton-conducting membrane transporter MQE22_RS11635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MQE22_RS11640 PF00361 Proton-conducting membrane transporter MQE22_RS11645 PF00361 Proton-conducting membrane transporter MQE22_RS11655 PF00146 NADH dehydrogenase MQE22_RS11665 PF00361 Proton-conducting membrane transporter MQE22_RS11665 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MQE22_RS11670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MQE22_RS11670 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MQE22_RS11670 PF00374 Nickel-dependent hydrogenase MQE22_RS11675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MQE22_RS11680 PF00361 Proton-conducting membrane transporter MQE22_RS11685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MQE22_RS11705 PF00300 Histidine phosphatase superfamily (branch 1) MQE22_RS11805 PF00437 Type II/IV secretion system protein MQE22_RS11810 PF13629 Pilus formation protein N terminal region MQE22_RS11810 PF00263 Bacterial type II and III secretion system protein MQE22_RS11810 PF04972 BON domain MQE22_RS11855 PF00223 Photosystem I psaA/psaB protein MQE22_RS11855 PF00691 OmpA family MQE22_RS11865 PF17284 Spermidine synthase tetramerisation domain MQE22_RS11875 PF00814 Glycoprotease family MQE22_RS11880 PF04305 Protein of unknown function (DUF455) MQE22_RS11910 PF00255 Glutathione peroxidase MQE22_RS11915 PF00579 tRNA synthetases class I (W and Y) MQE22_RS11940 PF01914 MarC family integral membrane protein MQE22_RS11950 PF00152 tRNA synthetases class II (D, K and N) MQE22_RS11950 PF02938 GAD domain MQE22_RS11950 PF01336 OB-fold nucleic acid binding domain MQE22_RS11955 PF03099 Biotin/lipoate A/B protein ligase family MQE22_RS11955 PF00293 NUDIX domain MQE22_RS11960 PF02445 Quinolinate synthetase A protein MQE22_RS11970 PF01709 Transcriptional regulator MQE22_RS11975 PF02075 Crossover junction endodeoxyribonuclease RuvC MQE22_RS11980 PF01330 RuvA N terminal domain MQE22_RS11980 PF07499 RuvA, C-terminal domain MQE22_RS11985 PF17864 RuvB AAA lid domain MQE22_RS11985 PF05491 RuvB C-terminal winged helix domain MQE22_RS11985 PF05496 Holliday junction DNA helicase RuvB P-loop domain MQE22_RS11990 PF03061 Thioesterase superfamily MQE22_RS11995 PF01618 MotA/TolQ/ExbB proton channel family MQE22_RS12000 PF02472 Biopolymer transport protein ExbD/TolR MQE22_RS12010 PF07676 WD40-like Beta Propeller Repeat MQE22_RS12010 PF04052 TolB amino-terminal domain MQE22_RS12015 PF01810 LysE type translocator MQE22_RS12020 PF06508 Queuosine biosynthesis protein QueC MQE22_RS12025 PF04055 Radical SAM superfamily MQE22_RS12035 PF00691 OmpA family MQE22_RS12040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MQE22_RS12040 PF03900 Porphobilinogen deaminase, C-terminal domain MQE22_RS12050 PF00490 Delta-aminolevulinic acid dehydratase MQE22_RS12060 PF08668 HDOD domain MQE22_RS12060 PF00563 EAL domain MQE22_RS12080 PF01625 Peptide methionine sulfoxide reductase MQE22_RS12085 PF01641 SelR domain MQE22_RS12090 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS12095 PF01548 Transposase MQE22_RS12095 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS12105 PF00158 Sigma-54 interaction domain MQE22_RS12105 PF00072 Response regulator receiver domain MQE22_RS12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS12115 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS12120 PF01979 Amidohydrolase family MQE22_RS12125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MQE22_RS12125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MQE22_RS12130 PF00156 Phosphoribosyl transferase domain MQE22_RS12135 PF03652 Holliday junction resolvase MQE22_RS12140 PF02622 Uncharacterized ACR, COG1678 MQE22_RS12145 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MQE22_RS12145 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MQE22_RS12155 PF00285 Citrate synthase, C-terminal domain MQE22_RS12160 PF01521 Iron-sulphur cluster biosynthesis MQE22_RS12170 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE22_RS12170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE22_RS12175 PF00364 Biotin-requiring enzyme MQE22_RS12175 PF02779 Transketolase, pyrimidine binding domain MQE22_RS12175 PF02780 Transketolase, C-terminal domain MQE22_RS12180 PF00676 Dehydrogenase E1 component MQE22_RS12195 PF00563 EAL domain MQE22_RS12195 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS12195 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS12200 PF00563 EAL domain MQE22_RS12200 PF00990 Diguanylate cyclase, GGDEF domain MQE22_RS12200 PF03707 Bacterial signalling protein N terminal repeat MQE22_RS12205 PF00563 EAL domain MQE22_RS12205 PF10388 EAL-domain associated signalling protein domain MQE22_RS12210 PF02774 Semialdehyde dehydrogenase, dimerisation domain MQE22_RS12210 PF01118 Semialdehyde dehydrogenase, NAD binding domain MQE22_RS12215 PF00380 Ribosomal protein S9/S16 MQE22_RS12220 PF00572 Ribosomal protein L13 MQE22_RS12230 PF02152 Dihydroneopterin aldolase MQE22_RS12235 PF02660 Glycerol-3-phosphate acyltransferase MQE22_RS12240 PF02675 S-adenosylmethionine decarboxylase MQE22_RS12245 PF00005 ABC transporter MQE22_RS12250 PF02405 Permease MlaE MQE22_RS12255 PF02470 MlaD protein MQE22_RS12270 PF00005 ABC transporter MQE22_RS12275 PF01479 S4 domain MQE22_RS12280 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MQE22_RS12290 PF00398 Ribosomal RNA adenine dimethylase MQE22_RS12305 PF05746 DALR anticodon binding domain MQE22_RS12305 PF03485 Arginyl tRNA synthetase N terminal domain MQE22_RS12305 PF00750 tRNA synthetases class I (R) MQE22_RS12310 PF00924 Mechanosensitive ion channel MQE22_RS12310 PF12795 Mechanosensitive ion channel porin domain MQE22_RS12310 PF12794 Mechanosensitive ion channel inner membrane domain 1 MQE22_RS12315 PF07690 Major Facilitator Superfamily MQE22_RS12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS12320 PF03466 LysR substrate binding domain MQE22_RS12325 PF05175 Methyltransferase small domain MQE22_RS12330 PF03372 Endonuclease/Exonuclease/phosphatase family MQE22_RS12345 PF00043 Glutathione S-transferase, C-terminal domain MQE22_RS12345 PF13417 Glutathione S-transferase, N-terminal domain MQE22_RS12350 PF03372 Endonuclease/Exonuclease/phosphatase family MQE22_RS12355 PF00762 Ferrochelatase MQE22_RS12360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MQE22_RS12365 PF03702 Anhydro-N-acetylmuramic acid kinase MQE22_RS12370 PF08501 Shikimate dehydrogenase substrate binding domain MQE22_RS12370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MQE22_RS12370 PF01488 Shikimate / quinate 5-dehydrogenase MQE22_RS12375 PF00437 Type II/IV secretion system protein MQE22_RS12375 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MQE22_RS12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE22_RS12380 PF00512 His Kinase A (phospho-acceptor) domain MQE22_RS12385 PF02954 Bacterial regulatory protein, Fis family MQE22_RS12385 PF00072 Response regulator receiver domain MQE22_RS12385 PF00158 Sigma-54 interaction domain MQE22_RS12390 PF06750 Bacterial Peptidase A24 N-terminal domain MQE22_RS12390 PF01478 Type IV leader peptidase family MQE22_RS12395 PF01121 Dephospho-CoA kinase MQE22_RS12405 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MQE22_RS12410 PF05818 Enterobacterial TraT complement resistance protein MQE22_RS12440 PF01464 Transglycosylase SLT domain MQE22_RS12445 PF02954 Bacterial regulatory protein, Fis family MQE22_RS12460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MQE22_RS12460 PF00289 Biotin carboxylase, N-terminal domain MQE22_RS12460 PF02785 Biotin carboxylase C-terminal domain MQE22_RS12465 PF00364 Biotin-requiring enzyme MQE22_RS12470 PF01220 Dehydroquinase class II MQE22_RS12475 PF00881 Nitroreductase family MQE22_RS12480 PF12848 ABC transporter MQE22_RS12480 PF00005 ABC transporter MQE22_RS12485 PF02261 Aspartate decarboxylase MQE22_RS12495 PF01578 Cytochrome C assembly protein MQE22_RS12500 PF05140 ResB-like family MQE22_RS12505 PF01926 50S ribosome-binding GTPase MQE22_RS12515 PF01367 5'-3' exonuclease, C-terminal SAM fold MQE22_RS12515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MQE22_RS12515 PF00476 DNA polymerase family A MQE22_RS12515 PF01612 3'-5' exonuclease MQE22_RS12520 PF03641 Possible lysine decarboxylase MQE22_RS12530 PF01636 Phosphotransferase enzyme family MQE22_RS12545 PF01381 Helix-turn-helix MQE22_RS12550 PF05973 Phage derived protein Gp49-like (DUF891) MQE22_RS12575 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system MQE22_RS12580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MQE22_RS12620 PF14698 Argininosuccinate lyase C-terminal MQE22_RS12620 PF00206 Lyase MQE22_RS12630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MQE22_RS12630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MQE22_RS12635 PF13091 PLD-like domain MQE22_RS12640 PF01979 Amidohydrolase family MQE22_RS12645 PF03717 Penicillin-binding Protein dimerisation domain MQE22_RS12645 PF00905 Penicillin binding protein transpeptidase domain MQE22_RS12650 PF00691 OmpA family MQE22_RS12670 PF02421 Ferrous iron transport protein B MQE22_RS12670 PF07670 Nucleoside recognition MQE22_RS12670 PF07664 Ferrous iron transport protein B C terminus MQE22_RS12670 PF17910 FeoB cytosolic helical domain MQE22_RS12680 PF04055 Radical SAM superfamily MQE22_RS12680 PF18693 TRAM domain MQE22_RS12680 PF00919 Uncharacterized protein family UPF0004 MQE22_RS12685 PF04324 BFD-like [2Fe-2S] binding domain MQE22_RS12685 PF01106 NifU-like domain MQE22_RS12685 PF01592 NifU-like N terminal domain MQE22_RS12700 PF03960 ArsC family MQE22_RS12705 PF06969 HemN C-terminal domain MQE22_RS12705 PF04055 Radical SAM superfamily MQE22_RS12710 PF03466 LysR substrate binding domain MQE22_RS12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE22_RS12715 PF07396 Phosphate-selective porin O and P MQE22_RS12730 PF00691 OmpA family MQE22_RS12730 PF13488 Glycine zipper MQE22_RS12735 PF00689 Cation transporting ATPase, C-terminus MQE22_RS12735 PF00690 Cation transporter/ATPase, N-terminus MQE22_RS12740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MQE22_RS12750 PF02913 FAD linked oxidases, C-terminal domain MQE22_RS12750 PF01565 FAD binding domain MQE22_RS12755 PF13580 SIS domain MQE22_RS12760 PF02021 Uncharacterised protein family UPF0102 MQE22_RS12770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MQE22_RS12780 PF00589 Phage integrase family MQE22_RS12790 PF01555 DNA methylase MQE22_RS12800 PF00795 Carbon-nitrogen hydrolase MQE22_RS12805 PF02534 Type IV secretory system Conjugative DNA transfer MQE22_RS12825 PF01850 PIN domain MQE22_RS12850 PF13362 Toprim domain MQE22_RS12850 PF18818 Metallopeptidase superfamily domain MQE22_RS12850 PF08401 Domain of unknown function (DUF1738) MQE22_RS12870 PF00717 Peptidase S24-like MQE22_RS12870 PF01726 LexA DNA binding domain MQE22_RS12890 PF00216 Bacterial DNA-binding protein MQE22_RS12920 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 MQE22_RS12920 PF13542 Helix-turn-helix domain of transposase family ISL3 MQE22_RS12920 PF01610 Transposase MQE22_RS12925 PF03358 NADPH-dependent FMN reductase MQE22_RS12930 PF02040 Arsenical pump membrane protein MQE22_RS12940 PF01451 Low molecular weight phosphotyrosine protein phosphatase MQE22_RS12950 PF08281 Sigma-70, region 4 MQE22_RS12950 PF04542 Sigma-70 region 2 MQE22_RS12970 PF02321 Outer membrane efflux protein MQE22_RS12975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE22_RS12980 PF00005 ABC transporter MQE22_RS12985 PF00005 ABC transporter MQE22_RS13010 PF00795 Carbon-nitrogen hydrolase MQE22_RS13025 PF05114 Protein of unknown function (DUF692) MQE22_RS13045 PF02683 Cytochrome C biogenesis protein transmembrane region MQE22_RS13045 PF11412 Disulphide bond corrector protein DsbC MQE22_RS13065 PF07690 Major Facilitator Superfamily MQE22_RS13075 PF00753 Metallo-beta-lactamase superfamily MQE22_RS13075 PF00581 Rhodanese-like domain MQE22_RS13090 PF01209 ubiE/COQ5 methyltransferase family MQE22_RS13110 PF01022 Bacterial regulatory protein, arsR family MQE22_RS13120 PF11799 impB/mucB/samB family C-terminal domain MQE22_RS13120 PF00817 impB/mucB/samB family MQE22_RS13150 PF00436 Single-strand binding protein family MQE22_RS13155 PF00476 DNA polymerase family A MQE22_RS13155 PF01367 5'-3' exonuclease, C-terminal SAM fold MQE22_RS13155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MQE22_RS13155 PF09281 Taq polymerase, exonuclease MQE22_RS13165 PF02371 Transposase IS116/IS110/IS902 family MQE22_RS13165 PF01548 Transposase MQE22_RS13170 PF10548 P22AR C-terminal domain MQE22_RS13170 PF08346 AntA/AntB antirepressor MQE22_RS13195 PF01131 DNA topoisomerase MQE22_RS13195 PF01751 Toprim domain MQE22_RS13240 PF00437 Type II/IV secretion system protein MQE22_RS13245 PF08721 TnsA endonuclease C terminal MQE22_RS13245 PF08722 TnsA endonuclease N terminal MQE22_RS13250 PF00665 Integrase core domain MQE22_RS13255 PF13401 AAA domain MQE22_RS13255 PF11426 Tn7 transposition regulator TnsC MQE22_RS13310 PF00873 AcrB/AcrD/AcrF family MQE22_RS13340 PF13411 MerR HTH family regulatory protein MQE22_RS13345 PF01545 Cation efflux family MQE22_RS13375 PF00403 Heavy-metal-associated domain MQE22_RS13385 PF00403 Heavy-metal-associated domain MQE22_RS13405 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MQE22_RS13435 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system MQE22_RS13445 PF01965 DJ-1/PfpI family MQE22_RS13475 PF03524 Conjugal transfer protein MQE22_RS13480 PF03743 Bacterial conjugation TrbI-like protein MQE22_RS13490 PF01883 Iron-sulfur cluster assembly protein MQE22_RS13490 PF10609 NUBPL iron-transfer P-loop NTPase MQE22_RS13495 PF17762 HTH domain found in ParB protein MQE22_RS13495 PF02195 ParB-like nuclease domain MQE22_RS13500 PF00700 Bacterial flagellin C-terminal helical region MQE22_RS13500 PF07196 Flagellin hook IN motif MQE22_RS13500 PF00669 Bacterial flagellin N-terminal helical region MQE22_RS13505 PF05872 Bacterial protein of unknown function (DUF853) MQE22_RS13520 PF00005 ABC transporter MQE22_RS13520 PF12848 ABC transporter MQE22_RS13535 PF00468 Ribosomal protein L34 MQE22_RS13540 PF00825 Ribonuclease P MQE22_RS13545 PF01809 Putative membrane protein insertion efficiency factor MQE22_RS13550 PF14849 YidC periplasmic domain MQE22_RS13550 PF02096 60Kd inner membrane protein MQE22_RS13555 PF01926 50S ribosome-binding GTPase MQE22_RS13555 PF12631 MnmE helical domain MQE22_RS13555 PF10396 GTP-binding protein TrmE N-terminus MQE22_RS13570 PF00011 Hsp20/alpha crystallin family MQE22_RS13575 PF03279 Bacterial lipid A biosynthesis acyltransferase MQE22_RS13580 PF00924 Mechanosensitive ion channel MQE22_RS13580 PF05552 Conserved TM helix MQE22_RS13600 PF01467 Cytidylyltransferase-like MQE22_RS13610 PF02590 Predicted SPOUT methyltransferase MQE22_RS13625 PF02545 Maf-like protein MQE22_RS13630 PF10150 Ribonuclease E/G family MQE22_RS13630 PF00575 S1 RNA binding domain MQE22_RS13640 PF01230 HIT domain MQE22_RS13645 PF00202 Aminotransferase class-III MQE22_RS13650 PF02581 Thiamine monophosphate synthase MQE22_RS13655 PF08543 Phosphomethylpyrimidine kinase MQE22_RS13665 PF00106 short chain dehydrogenase MQE22_RS13680 PF11740 Plasmid replication region DNA-binding N-term MQE22_RS13700 PF05016 ParE toxin of type II toxin-antitoxin system, parDE MQE22_RS13705 PF01402 Ribbon-helix-helix protein, copG family MQE22_RS13725 PF00239 Resolvase, N terminal domain MQE22_RS13725 PF02796 Helix-turn-helix domain of resolvase MQE22_RS13740 PF00535 Glycosyl transferase family 2