locus-tag class description CQB05_RS00085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQB05_RS00085 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS00085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQB05_RS00090 PF02803 Thiolase, C-terminal domain CQB05_RS00090 PF00108 Thiolase, N-terminal domain CQB05_RS00095 PF03061 Thioesterase superfamily CQB05_RS00100 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS00100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS00100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS00100 PF12806 Acetyl-CoA dehydrogenase C-terminal like CQB05_RS00125 PF00107 Zinc-binding dehydrogenase CQB05_RS00125 PF16884 N-terminal domain of oxidoreductase CQB05_RS00130 PF13673 Acetyltransferase (GNAT) domain CQB05_RS00140 PF00106 short chain dehydrogenase CQB05_RS00145 PF00106 short chain dehydrogenase CQB05_RS00150 PF13416 Bacterial extracellular solute-binding protein CQB05_RS00165 PF01037 Lrp/AsnC ligand binding domain CQB05_RS00180 PF00463 Isocitrate lyase family CQB05_RS00185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQB05_RS00185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQB05_RS00185 PF02824 TGS domain CQB05_RS00185 PF03129 Anticodon binding domain CQB05_RS00190 PF00707 Translation initiation factor IF-3, C-terminal domain CQB05_RS00190 PF05198 Translation initiation factor IF-3, N-terminal domain CQB05_RS00195 PF01632 Ribosomal protein L35 CQB05_RS00200 PF00453 Ribosomal protein L20 CQB05_RS00205 PF01409 tRNA synthetases class II core domain (F) CQB05_RS00205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CQB05_RS00210 PF03484 tRNA synthetase B5 domain CQB05_RS00210 PF03147 Ferredoxin-fold anticodon binding domain CQB05_RS00210 PF01588 Putative tRNA binding domain CQB05_RS00210 PF03483 B3/4 domain CQB05_RS00210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CQB05_RS00215 PF00216 Bacterial DNA-binding protein CQB05_RS00220 PF13411 MerR HTH family regulatory protein CQB05_RS00240 PF14602 Hexapeptide repeat of succinyl-transferase CQB05_RS00240 PF12464 Maltose acetyltransferase CQB05_RS00245 PF00005 ABC transporter CQB05_RS00245 PF00664 ABC transporter transmembrane region CQB05_RS00250 PF02040 Arsenical pump membrane protein CQB05_RS00255 PF00563 EAL domain CQB05_RS00255 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS00255 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS00260 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CQB05_RS00270 PF06470 SMC proteins Flexible Hinge Domain CQB05_RS00270 PF02463 RecF/RecN/SMC N terminal domain CQB05_RS00280 PF01653 NAD-dependent DNA ligase adenylation domain CQB05_RS00280 PF03120 NAD-dependent DNA ligase OB-fold domain CQB05_RS00280 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CQB05_RS00280 PF00533 BRCA1 C Terminus (BRCT) domain CQB05_RS00280 PF12826 Helix-hairpin-helix motif CQB05_RS00285 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS00285 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS00295 PF03527 RHS protein CQB05_RS00295 PF05593 RHS Repeat CQB05_RS00320 PF12419 SNF2 Helicase protein CQB05_RS00320 PF00271 Helicase conserved C-terminal domain CQB05_RS00320 PF00176 SNF2 family N-terminal domain CQB05_RS00335 PF00877 NlpC/P60 family CQB05_RS00340 PF07995 Glucose / Sorbosone dehydrogenase CQB05_RS00350 PF16177 Acetyl-coenzyme A synthetase N-terminus CQB05_RS00350 PF00501 AMP-binding enzyme CQB05_RS00350 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS00355 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS00355 PF00563 EAL domain CQB05_RS00355 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS00365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CQB05_RS00365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQB05_RS00370 PF06029 AlkA N-terminal domain CQB05_RS00370 PF00730 HhH-GPD superfamily base excision DNA repair protein CQB05_RS00370 PF12833 Helix-turn-helix domain CQB05_RS00370 PF02805 Metal binding domain of Ada CQB05_RS00375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQB05_RS00375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQB05_RS00375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQB05_RS00375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQB05_RS00385 PF00534 Glycosyl transferases group 1 CQB05_RS00385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CQB05_RS00390 PF00583 Acetyltransferase (GNAT) family CQB05_RS00390 PF13607 Succinyl-CoA ligase like flavodoxin domain CQB05_RS00390 PF13380 CoA binding domain CQB05_RS00395 PF02321 Outer membrane efflux protein CQB05_RS00410 PF17922 Tetracyclin repressor-like, C-terminal domain CQB05_RS00410 PF00440 Bacterial regulatory proteins, tetR family CQB05_RS00415 PF01625 Peptide methionine sulfoxide reductase CQB05_RS00425 PF00005 ABC transporter CQB05_RS00450 PF00593 TonB dependent receptor CQB05_RS00450 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS00455 PF01266 FAD dependent oxidoreductase CQB05_RS00460 PF00171 Aldehyde dehydrogenase family CQB05_RS00470 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CQB05_RS00470 PF01243 Pyridoxamine 5'-phosphate oxidase CQB05_RS00495 PF00356 Bacterial regulatory proteins, lacI family CQB05_RS00505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CQB05_RS00510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CQB05_RS00515 PF03480 Bacterial extracellular solute-binding protein, family 7 CQB05_RS00520 PF00920 Dehydratase family CQB05_RS00525 PF01081 KDPG and KHG aldolase CQB05_RS00535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQB05_RS00550 PF00106 short chain dehydrogenase CQB05_RS00575 PF00005 ABC transporter CQB05_RS00580 PF03466 LysR substrate binding domain CQB05_RS00580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS00585 PF03358 NADPH-dependent FMN reductase CQB05_RS00595 PF08267 Cobalamin-independent synthase, N-terminal domain CQB05_RS00595 PF01717 Cobalamin-independent synthase, Catalytic domain CQB05_RS00650 PF01434 Peptidase family M41 CQB05_RS00650 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS00650 PF17862 AAA+ lid domain CQB05_RS00760 PF08681 Protein of unknown function (DUF1778) CQB05_RS00800 PF05593 RHS Repeat CQB05_RS00800 PF03527 RHS protein CQB05_RS00825 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS00825 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS00840 PF14579 Helix-hairpin-helix motif CQB05_RS00840 PF02811 PHP domain CQB05_RS00840 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQB05_RS00840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQB05_RS00845 PF02899 Phage integrase, N-terminal SAM-like domain CQB05_RS00845 PF00589 Phage integrase family CQB05_RS00850 PF10411 Disulfide bond isomerase protein N-terminus CQB05_RS00850 PF13098 Thioredoxin-like domain CQB05_RS00865 PF01464 Transglycosylase SLT domain CQB05_RS00865 PF10145 Phage-related minor tail protein CQB05_RS00865 PF01551 Peptidase family M23 CQB05_RS00885 PF00437 Type II/IV secretion system protein CQB05_RS00900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQB05_RS00900 PF00437 Type II/IV secretion system protein CQB05_RS00915 PF00437 Type II/IV secretion system protein CQB05_RS00965 PF03421 YopJ Serine/Threonine acetyltransferase CQB05_RS00980 PF03695 Uncharacterised protein family (UPF0149) CQB05_RS00980 PF02810 SEC-C motif CQB05_RS00985 PF13700 Domain of unknown function (DUF4158) CQB05_RS00985 PF01526 Tn3 transposase DDE domain CQB05_RS01000 PF02796 Helix-turn-helix domain of resolvase CQB05_RS01000 PF00239 Resolvase, N terminal domain CQB05_RS01090 PF04434 SWIM zinc finger CQB05_RS01090 PF00176 SNF2 family N-terminal domain CQB05_RS01090 PF00271 Helicase conserved C-terminal domain CQB05_RS01145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQB05_RS01160 PF05170 AsmA family CQB05_RS01165 PF02811 PHP domain CQB05_RS01165 PF14579 Helix-hairpin-helix motif CQB05_RS01165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQB05_RS01165 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQB05_RS01180 PF00719 Inorganic pyrophosphatase CQB05_RS01185 PF03030 Inorganic H+ pyrophosphatase CQB05_RS01205 PF00171 Aldehyde dehydrogenase family CQB05_RS01210 PF02535 ZIP Zinc transporter CQB05_RS01215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CQB05_RS01215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CQB05_RS01230 PF04055 Radical SAM superfamily CQB05_RS01230 PF06463 Molybdenum Cofactor Synthesis C CQB05_RS01235 PF12804 MobA-like NTP transferase domain CQB05_RS01245 PF03453 MoeA N-terminal region (domain I and II) CQB05_RS01245 PF03454 MoeA C-terminal region (domain IV) CQB05_RS01245 PF00994 Probable molybdopterin binding domain CQB05_RS01260 PF00075 RNase H CQB05_RS01265 PF08241 Methyltransferase domain CQB05_RS01270 PF16123 Hydroxyacylglutathione hydrolase C-terminus CQB05_RS01270 PF00753 Metallo-beta-lactamase superfamily CQB05_RS01275 PF01476 LysM domain CQB05_RS01275 PF01464 Transglycosylase SLT domain CQB05_RS01295 PF13662 Toprim domain CQB05_RS01295 PF02132 RecR protein CQB05_RS01300 PF02575 YbaB/EbfC DNA-binding family CQB05_RS01315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS01315 PF08269 Cache domain CQB05_RS01340 PF00085 Thioredoxin CQB05_RS01345 PF07497 Rho termination factor, RNA-binding domain CQB05_RS01345 PF07498 Rho termination factor, N-terminal domain CQB05_RS01345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQB05_RS01350 PF13476 AAA domain CQB05_RS01355 PF12320 Type 5 capsule protein repressor C-terminal domain CQB05_RS01355 PF00149 Calcineurin-like phosphoesterase CQB05_RS01360 PF01197 Ribosomal protein L31 CQB05_RS01370 PF01554 MatE CQB05_RS01380 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS01380 PF00072 Response regulator receiver domain CQB05_RS01385 PF01895 PhoU domain CQB05_RS01390 PF00005 ABC transporter CQB05_RS01395 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS01400 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS01405 PF12849 PBP superfamily domain CQB05_RS01410 PF02541 Ppx/GppA phosphatase family CQB05_RS01420 PF00300 Histidine phosphatase superfamily (branch 1) CQB05_RS01435 PF00563 EAL domain CQB05_RS01435 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS01435 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS01440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQB05_RS01440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQB05_RS01440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQB05_RS01440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQB05_RS01445 PF00809 Pterin binding enzyme CQB05_RS01450 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS01450 PF17862 AAA+ lid domain CQB05_RS01450 PF06480 FtsH Extracellular CQB05_RS01450 PF01434 Peptidase family M41 CQB05_RS01455 PF01728 FtsJ-like methyltransferase CQB05_RS01460 PF01985 CRS1 / YhbY (CRM) domain CQB05_RS01475 PF03449 Transcription elongation factor, N-terminal CQB05_RS01475 PF01272 Transcription elongation factor, GreA/GreB, C-term CQB05_RS01480 PF02142 MGS-like domain CQB05_RS01480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CQB05_RS01480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQB05_RS01485 PF00117 Glutamine amidotransferase class-I CQB05_RS01485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CQB05_RS01495 PF00324 Amino acid permease CQB05_RS01515 PF00171 Aldehyde dehydrogenase family CQB05_RS01525 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS01525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS01525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS01535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQB05_RS01535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQB05_RS01540 PF00080 Copper/zinc superoxide dismutase (SODC) CQB05_RS01545 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS01545 PF00593 TonB dependent receptor CQB05_RS01550 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS01560 PF08666 SAF domain CQB05_RS01560 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CQB05_RS01565 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CQB05_RS01575 PF03480 Bacterial extracellular solute-binding protein, family 7 CQB05_RS01585 PF01370 NAD dependent epimerase/dehydratase family CQB05_RS01595 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS01600 PF00701 Dihydrodipicolinate synthetase family CQB05_RS01620 PF00082 Subtilase family CQB05_RS01640 PF00376 MerR family regulatory protein CQB05_RS01640 PF09278 MerR, DNA binding CQB05_RS01645 PF07690 Major Facilitator Superfamily CQB05_RS01660 PF01361 Tautomerase enzyme CQB05_RS01665 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS01665 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS01670 PF03466 LysR substrate binding domain CQB05_RS01675 PF00180 Isocitrate/isopropylmalate dehydrogenase CQB05_RS01695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CQB05_RS01695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CQB05_RS01700 PF02601 Exonuclease VII, large subunit CQB05_RS01700 PF13742 OB-fold nucleic acid binding domain CQB05_RS01705 PF01618 MotA/TolQ/ExbB proton channel family CQB05_RS01710 PF02472 Biopolymer transport protein ExbD/TolR CQB05_RS01715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CQB05_RS01720 PF03966 Trm112p-like protein CQB05_RS01725 PF02348 Cytidylyltransferase CQB05_RS01730 PF05191 Adenylate kinase, active site lid CQB05_RS01740 PF17763 Glutaminase/Asparaginase C-terminal domain CQB05_RS01740 PF00710 Asparaginase, N-terminal CQB05_RS01745 PF00717 Peptidase S24-like CQB05_RS01745 PF01726 LexA DNA binding domain CQB05_RS01755 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CQB05_RS01755 PF04408 Helicase associated domain (HA2) CQB05_RS01755 PF11898 Domain of unknown function (DUF3418) CQB05_RS01755 PF00270 DEAD/DEAH box helicase CQB05_RS01755 PF00271 Helicase conserved C-terminal domain CQB05_RS01765 PF01266 FAD dependent oxidoreductase CQB05_RS01770 PF00583 Acetyltransferase (GNAT) family CQB05_RS01770 PF00696 Amino acid kinase family CQB05_RS01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS01780 PF03466 LysR substrate binding domain CQB05_RS01785 PF17773 UPF0176 acylphosphatase like domain CQB05_RS01785 PF00581 Rhodanese-like domain CQB05_RS01790 PF02600 Disulfide bond formation protein DsbB CQB05_RS01795 PF12857 TOBE-like domain CQB05_RS01795 PF17850 CysA C-terminal regulatory domain CQB05_RS01795 PF00005 ABC transporter CQB05_RS01800 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS01805 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS01825 PF03466 LysR substrate binding domain CQB05_RS01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS01830 PF02525 Flavodoxin-like fold CQB05_RS01835 PF03358 NADPH-dependent FMN reductase CQB05_RS01840 PF03180 NLPA lipoprotein CQB05_RS01845 PF00672 HAMP domain CQB05_RS01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS01845 PF02203 Tar ligand binding domain homologue CQB05_RS01850 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS01855 PF00005 ABC transporter CQB05_RS01855 PF09383 NIL domain CQB05_RS01860 PF13188 PAS domain CQB05_RS01860 PF08448 PAS fold CQB05_RS01860 PF00072 Response regulator receiver domain CQB05_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS01860 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS01865 PF07690 Major Facilitator Superfamily CQB05_RS01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS01870 PF03466 LysR substrate binding domain CQB05_RS01875 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQB05_RS01885 PF02321 Outer membrane efflux protein CQB05_RS01890 PF00873 AcrB/AcrD/AcrF family CQB05_RS01895 PF00529 HlyD membrane-fusion protein of T1SS CQB05_RS01895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQB05_RS01900 PF00072 Response regulator receiver domain CQB05_RS01900 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS01905 PF00989 PAS fold CQB05_RS01905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS01905 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS01905 PF18698 Histidine kinase sensor domain CQB05_RS01905 PF00672 HAMP domain CQB05_RS01920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS01920 PF03466 LysR substrate binding domain CQB05_RS01935 PF02735 Ku70/Ku80 beta-barrel domain CQB05_RS01945 PF06968 Biotin and Thiamin Synthesis associated domain CQB05_RS01945 PF04055 Radical SAM superfamily CQB05_RS01960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQB05_RS01960 PF18140 Propionyl-coenzyme A carboxylase BT domain CQB05_RS01960 PF00364 Biotin-requiring enzyme CQB05_RS01960 PF00289 Biotin carboxylase, N-terminal domain CQB05_RS01960 PF02785 Biotin carboxylase C-terminal domain CQB05_RS01970 PF01039 Carboxyl transferase domain CQB05_RS01985 PF02310 B12 binding domain CQB05_RS01985 PF01642 Methylmalonyl-CoA mutase CQB05_RS01990 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS01990 PF07729 FCD domain CQB05_RS02000 PF00873 AcrB/AcrD/AcrF family CQB05_RS02005 PF00529 HlyD membrane-fusion protein of T1SS CQB05_RS02005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQB05_RS02010 PF02321 Outer membrane efflux protein CQB05_RS02050 PF00072 Response regulator receiver domain CQB05_RS02050 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS02055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS02055 PF02203 Tar ligand binding domain homologue CQB05_RS02055 PF00672 HAMP domain CQB05_RS02070 PF01609 Transposase DDE domain CQB05_RS02070 PF05598 Transposase domain (DUF772) CQB05_RS02080 PF01207 Dihydrouridine synthase (Dus) CQB05_RS02085 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS02085 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS02085 PF00563 EAL domain CQB05_RS02100 PF04060 Putative Fe-S cluster CQB05_RS02105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS02105 PF00672 HAMP domain CQB05_RS02105 PF02203 Tar ligand binding domain homologue CQB05_RS02110 PF00155 Aminotransferase class I and II CQB05_RS02115 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CQB05_RS02115 PF14602 Hexapeptide repeat of succinyl-transferase CQB05_RS02120 PF00437 Type II/IV secretion system protein CQB05_RS02130 PF05175 Methyltransferase small domain CQB05_RS02135 PF00005 ABC transporter CQB05_RS02135 PF12848 ABC transporter CQB05_RS02140 PF00106 short chain dehydrogenase CQB05_RS02145 PF00108 Thiolase, N-terminal domain CQB05_RS02145 PF02803 Thiolase, C-terminal domain CQB05_RS02150 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CQB05_RS02160 PF02578 Multi-copper polyphenol oxidoreductase laccase CQB05_RS02165 PF13417 Glutathione S-transferase, N-terminal domain CQB05_RS02170 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQB05_RS02180 PF00069 Protein kinase domain CQB05_RS02185 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS02190 PF00905 Penicillin binding protein transpeptidase domain CQB05_RS02190 PF00912 Transglycosylase CQB05_RS02195 PF17785 PUA-like domain CQB05_RS02195 PF10672 S-adenosylmethionine-dependent methyltransferase CQB05_RS02210 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS02220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS02220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQB05_RS02225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQB05_RS02225 PF00364 Biotin-requiring enzyme CQB05_RS02225 PF02817 e3 binding domain CQB05_RS02230 PF17831 Pyruvate dehydrogenase E1 component middle domain CQB05_RS02230 PF00456 Transketolase, thiamine diphosphate binding domain CQB05_RS02235 PF00989 PAS fold CQB05_RS02235 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS02240 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS02240 PF00072 Response regulator receiver domain CQB05_RS02245 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CQB05_RS02245 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CQB05_RS02250 PF01432 Peptidase family M3 CQB05_RS02260 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CQB05_RS02265 PF01180 Dihydroorotate dehydrogenase CQB05_RS02285 PF01266 FAD dependent oxidoreductase CQB05_RS02290 PF00850 Histone deacetylase domain CQB05_RS02305 PF00929 Exonuclease CQB05_RS02310 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS02315 PF00012 Hsp70 protein CQB05_RS02320 PF07743 HSCB C-terminal oligomerisation domain CQB05_RS02325 PF01521 Iron-sulphur cluster biosynthesis CQB05_RS02330 PF01592 NifU-like N terminal domain CQB05_RS02335 PF00266 Aminotransferase class-V CQB05_RS02340 PF02082 Transcriptional regulator CQB05_RS02345 PF17757 UvrB interaction domain CQB05_RS02345 PF12344 Ultra-violet resistance protein B CQB05_RS02345 PF02151 UvrB/uvrC motif CQB05_RS02345 PF04851 Type III restriction enzyme, res subunit CQB05_RS02345 PF00271 Helicase conserved C-terminal domain CQB05_RS02350 PF00155 Aminotransferase class I and II CQB05_RS02355 PF02515 CoA-transferase family III CQB05_RS02365 PF08497 Radical SAM N-terminal CQB05_RS02365 PF04055 Radical SAM superfamily CQB05_RS02365 PF11842 Domain of unknown function (DUF3362) CQB05_RS02370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS02370 PF02203 Tar ligand binding domain homologue CQB05_RS02370 PF00672 HAMP domain CQB05_RS02380 PF00127 Copper binding proteins, plastocyanin/azurin family CQB05_RS02385 PF01205 Uncharacterized protein family UPF0029 CQB05_RS02385 PF09186 Domain of unknown function (DUF1949) CQB05_RS02400 PF01266 FAD dependent oxidoreductase CQB05_RS02405 PF01425 Amidase CQB05_RS02410 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS02430 PF03466 LysR substrate binding domain CQB05_RS02450 PF07995 Glucose / Sorbosone dehydrogenase CQB05_RS02455 PF01479 S4 domain CQB05_RS02555 PF00239 Resolvase, N terminal domain CQB05_RS02565 PF00239 Resolvase, N terminal domain CQB05_RS02575 PF05707 Zonular occludens toxin (Zot) CQB05_RS02850 PF00717 Peptidase S24-like CQB05_RS02850 PF01726 LexA DNA binding domain CQB05_RS02880 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT CQB05_RS02945 PF01842 ACT domain CQB05_RS02945 PF13840 ACT domain CQB05_RS02945 PF00696 Amino acid kinase family CQB05_RS02950 PF01171 PP-loop family CQB05_RS02950 PF09179 TilS substrate binding domain CQB05_RS02955 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CQB05_RS02960 PF02805 Metal binding domain of Ada CQB05_RS02960 PF12833 Helix-turn-helix domain CQB05_RS02960 PF06029 AlkA N-terminal domain CQB05_RS02960 PF00730 HhH-GPD superfamily base excision DNA repair protein CQB05_RS02965 PF09190 DALR domain CQB05_RS02965 PF01406 tRNA synthetases class I (C) catalytic domain CQB05_RS02980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CQB05_RS02985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CQB05_RS02990 PF00149 Calcineurin-like phosphoesterase CQB05_RS02995 PF06167 Glucose-regulated metallo-peptidase M90 CQB05_RS03005 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS03010 PF03466 LysR substrate binding domain CQB05_RS03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS03020 PF01037 Lrp/AsnC ligand binding domain CQB05_RS03040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CQB05_RS03045 PF00472 RF-1 domain CQB05_RS03055 PF01220 Dehydroquinase class II CQB05_RS03065 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CQB05_RS03065 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQB05_RS03080 PF00440 Bacterial regulatory proteins, tetR family CQB05_RS03080 PF17932 Tetracyclin repressor-like, C-terminal domain CQB05_RS03120 PF13091 PLD-like domain CQB05_RS03120 PF13396 Phospholipase_D-nuclease N-terminal CQB05_RS03130 PF00849 RNA pseudouridylate synthase CQB05_RS03150 PF02203 Tar ligand binding domain homologue CQB05_RS03150 PF00672 HAMP domain CQB05_RS03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS03155 PF01547 Bacterial extracellular solute-binding protein CQB05_RS03180 PF00849 RNA pseudouridylate synthase CQB05_RS03185 PF02308 MgtC family CQB05_RS03190 PF09278 MerR, DNA binding CQB05_RS03190 PF00376 MerR family regulatory protein CQB05_RS03200 PF07690 Major Facilitator Superfamily CQB05_RS03215 PF13609 Gram-negative porin CQB05_RS03220 PF01926 50S ribosome-binding GTPase CQB05_RS03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS03235 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS03240 PF01810 LysE type translocator CQB05_RS03250 PF02463 RecF/RecN/SMC N terminal domain CQB05_RS03255 PF00205 Thiamine pyrophosphate enzyme, central domain CQB05_RS03255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQB05_RS03255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQB05_RS03260 PF04262 Glutamate-cysteine ligase CQB05_RS03270 PF08450 SMP-30/Gluconolactonase/LRE-like region CQB05_RS03280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS03280 PF03466 LysR substrate binding domain CQB05_RS03285 PF00171 Aldehyde dehydrogenase family CQB05_RS03290 PF13407 Periplasmic binding protein domain CQB05_RS03295 PF13407 Periplasmic binding protein domain CQB05_RS03300 PF00005 ABC transporter CQB05_RS03305 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS03310 PF00005 ABC transporter CQB05_RS03315 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS03320 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS03325 PF00920 Dehydratase family CQB05_RS03330 PF00701 Dihydrodipicolinate synthetase family CQB05_RS03335 PF05035 2-keto-3-deoxy-galactonokinase CQB05_RS03340 PF01081 KDPG and KHG aldolase CQB05_RS03345 PF13378 Enolase C-terminal domain-like CQB05_RS03345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQB05_RS03360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS03360 PF00672 HAMP domain CQB05_RS03360 PF02203 Tar ligand binding domain homologue CQB05_RS03370 PF00072 Response regulator receiver domain CQB05_RS03370 PF01339 CheB methylesterase CQB05_RS03375 PF00072 Response regulator receiver domain CQB05_RS03375 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS03385 PF00989 PAS fold CQB05_RS03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS03385 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS03395 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS03410 PF00885 6,7-dimethyl-8-ribityllumazine synthase CQB05_RS03415 PF01029 NusB family CQB05_RS03420 PF00155 Aminotransferase class I and II CQB05_RS03425 PF03061 Thioesterase superfamily CQB05_RS03430 PF01618 MotA/TolQ/ExbB proton channel family CQB05_RS03435 PF02472 Biopolymer transport protein ExbD/TolR CQB05_RS03445 PF00083 Sugar (and other) transporter CQB05_RS03445 PF07690 Major Facilitator Superfamily CQB05_RS03450 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CQB05_RS03450 PF06481 COX Aromatic Rich Motif CQB05_RS03455 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQB05_RS03460 PF00510 Cytochrome c oxidase subunit III CQB05_RS03465 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CQB05_RS03475 PF00989 PAS fold CQB05_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS03480 PF00072 Response regulator receiver domain CQB05_RS03490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS03490 PF03466 LysR substrate binding domain CQB05_RS03495 PF16325 Peptidase family U32 C-terminal domain CQB05_RS03495 PF01136 Peptidase family U32 CQB05_RS03510 PF05992 SbmA/BacA-like family CQB05_RS03515 PF00330 Aconitase family (aconitate hydratase) CQB05_RS03515 PF06434 Aconitate hydratase 2 N-terminus CQB05_RS03515 PF11791 Aconitate B N-terminal domain CQB05_RS03530 PF13649 Methyltransferase domain CQB05_RS03535 PF00056 lactate/malate dehydrogenase, NAD binding domain CQB05_RS03535 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CQB05_RS03540 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS03540 PF07702 UTRA domain CQB05_RS03555 PF02910 Fumarate reductase flavoprotein C-term CQB05_RS03555 PF00890 FAD binding domain CQB05_RS03560 PF13085 2Fe-2S iron-sulfur cluster binding domain CQB05_RS03565 PF03937 Flavinator of succinate dehydrogenase CQB05_RS03570 PF00285 Citrate synthase, C-terminal domain CQB05_RS03580 PF13302 Acetyltransferase (GNAT) domain CQB05_RS03585 PF01965 DJ-1/PfpI family CQB05_RS03585 PF12833 Helix-turn-helix domain CQB05_RS03590 PF08240 Alcohol dehydrogenase GroES-like domain CQB05_RS03590 PF00107 Zinc-binding dehydrogenase CQB05_RS03595 PF00756 Putative esterase CQB05_RS03600 PF00884 Sulfatase CQB05_RS03600 PF08019 Phosphoethanolamine transferase EptA/EptB CQB05_RS03605 PF00171 Aldehyde dehydrogenase family CQB05_RS03610 PF00180 Isocitrate/isopropylmalate dehydrogenase CQB05_RS03615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQB05_RS03615 PF00005 ABC transporter CQB05_RS03620 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS03620 PF12911 N-terminal TM domain of oligopeptide transport permease C CQB05_RS03625 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS03635 PF01266 FAD dependent oxidoreductase CQB05_RS03655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQB05_RS03660 PF00202 Aminotransferase class-III CQB05_RS03665 PF01037 Lrp/AsnC ligand binding domain CQB05_RS03670 PF07687 Peptidase dimerisation domain CQB05_RS03670 PF01546 Peptidase family M20/M25/M40 CQB05_RS03685 PF04055 Radical SAM superfamily CQB05_RS03715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS03715 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS03715 PF12806 Acetyl-CoA dehydrogenase C-terminal like CQB05_RS03715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS03720 PF00766 Electron transfer flavoprotein FAD-binding domain CQB05_RS03720 PF01012 Electron transfer flavoprotein domain CQB05_RS03725 PF01012 Electron transfer flavoprotein domain CQB05_RS03730 PF00924 Mechanosensitive ion channel CQB05_RS03730 PF12795 Mechanosensitive ion channel porin domain CQB05_RS03730 PF12794 Mechanosensitive ion channel inner membrane domain 1 CQB05_RS03735 PF03421 YopJ Serine/Threonine acetyltransferase CQB05_RS03740 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS03745 PF00850 Histone deacetylase domain CQB05_RS03750 PF17863 AAA lid domain CQB05_RS03750 PF07726 ATPase family associated with various cellular activities (AAA) CQB05_RS03760 PF11992 Domain of unknown function (DUF3488) CQB05_RS03760 PF13559 Domain of unknown function (DUF4129) CQB05_RS03760 PF01841 Transglutaminase-like superfamily CQB05_RS03765 PF13406 Transglycosylase SLT domain CQB05_RS03775 PF07690 Major Facilitator Superfamily CQB05_RS03795 PF13458 Periplasmic binding protein CQB05_RS03810 PF00814 Glycoprotease family CQB05_RS03820 PF03861 ANTAR domain CQB05_RS03820 PF00072 Response regulator receiver domain CQB05_RS03835 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS03840 PF00005 ABC transporter CQB05_RS03845 PF01872 RibD C-terminal domain CQB05_RS03860 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CQB05_RS03870 PF01053 Cys/Met metabolism PLP-dependent enzyme CQB05_RS03925 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS03925 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS03935 PF07690 Major Facilitator Superfamily CQB05_RS03940 PF17755 UvrA DNA-binding domain CQB05_RS03950 PF00072 Response regulator receiver domain CQB05_RS03960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS03960 PF16591 Helical bimodular sensor domain CQB05_RS03960 PF00672 HAMP domain CQB05_RS03965 PF02895 Signal transducing histidine kinase, homodimeric domain CQB05_RS03965 PF01584 CheW-like domain CQB05_RS03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS03965 PF01627 Hpt domain CQB05_RS03970 PF01204 Trehalase CQB05_RS03975 PF01039 Carboxyl transferase domain CQB05_RS03980 PF00296 Luciferase-like monooxygenase CQB05_RS03985 PF00571 CBS domain CQB05_RS03985 PF00478 IMP dehydrogenase / GMP reductase domain CQB05_RS03990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS03990 PF08447 PAS fold CQB05_RS04000 PF00873 AcrB/AcrD/AcrF family CQB05_RS04015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS04015 PF00672 HAMP domain CQB05_RS04015 PF02203 Tar ligand binding domain homologue CQB05_RS04020 PF18267 Rubredoxin NAD+ reductase C-terminal domain CQB05_RS04020 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS04020 PF04324 BFD-like [2Fe-2S] binding domain CQB05_RS04020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQB05_RS04020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CQB05_RS04025 PF00355 Rieske [2Fe-2S] domain CQB05_RS04030 PF00384 Molybdopterin oxidoreductase CQB05_RS04030 PF01568 Molydopterin dinucleotide binding domain CQB05_RS04030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CQB05_RS04035 PF00591 Glycosyl transferase family, a/b domain CQB05_RS04035 PF02885 Glycosyl transferase family, helical bundle domain CQB05_RS04040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQB05_RS04045 PF00553 Cellulose binding domain CQB05_RS04045 PF00150 Cellulase (glycosyl hydrolase family 5) CQB05_RS04050 PF03061 Thioesterase superfamily CQB05_RS04055 PF00484 Carbonic anhydrase CQB05_RS04090 PF01165 Ribosomal protein S21 CQB05_RS04095 PF09424 Yqey-like protein CQB05_RS04100 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS04100 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS04110 PF03466 LysR substrate binding domain CQB05_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS04115 PF00180 Isocitrate/isopropylmalate dehydrogenase CQB05_RS04120 PF01734 Patatin-like phospholipase CQB05_RS04125 PF07690 Major Facilitator Superfamily CQB05_RS04130 PF03466 LysR substrate binding domain CQB05_RS04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS04135 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS04140 PF08666 SAF domain CQB05_RS04140 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CQB05_RS04145 PF00171 Aldehyde dehydrogenase family CQB05_RS04150 PF03328 HpcH/HpaI aldolase/citrate lyase family CQB05_RS04160 PF04751 Protein of unknown function (DUF615) CQB05_RS04165 PF00994 Probable molybdopterin binding domain CQB05_RS04170 PF00132 Bacterial transferase hexapeptide (six repeats) CQB05_RS04175 PF00588 SpoU rRNA Methylase family CQB05_RS04185 PF00005 ABC transporter CQB05_RS04200 PF00459 Inositol monophosphatase family CQB05_RS04220 PF00005 ABC transporter CQB05_RS04230 PF00072 Response regulator receiver domain CQB05_RS04235 PF00072 Response regulator receiver domain CQB05_RS04235 PF01627 Hpt domain CQB05_RS04235 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS04235 PF00672 HAMP domain CQB05_RS04235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CQB05_RS04280 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS04280 PF00593 TonB dependent receptor CQB05_RS04290 PF00488 MutS domain V CQB05_RS04290 PF05192 MutS domain III CQB05_RS04290 PF05188 MutS domain II CQB05_RS04290 PF01624 MutS domain I CQB05_RS04290 PF05190 MutS family domain IV CQB05_RS04330 PF08447 PAS fold CQB05_RS04330 PF08448 PAS fold CQB05_RS04330 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS04330 PF13426 PAS domain CQB05_RS04330 PF00563 EAL domain CQB05_RS04330 PF05231 MASE1 CQB05_RS04335 PF02673 Bacitracin resistance protein BacA CQB05_RS04340 PF02321 Outer membrane efflux protein CQB05_RS04345 PF00873 AcrB/AcrD/AcrF family CQB05_RS04355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQB05_RS04365 PF06580 Histidine kinase CQB05_RS04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS04365 PF07694 5TMR of 5TMR-LYT CQB05_RS04370 PF04397 LytTr DNA-binding domain CQB05_RS04370 PF00072 Response regulator receiver domain CQB05_RS04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS04395 PF03459 TOBE domain CQB05_RS04410 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS04415 PF00005 ABC transporter CQB05_RS04415 PF03459 TOBE domain CQB05_RS04420 PF02028 BCCT, betaine/carnitine/choline family transporter CQB05_RS04425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CQB05_RS04425 PF00128 Alpha amylase, catalytic domain CQB05_RS04425 PF02806 Alpha amylase, C-terminal all-beta domain CQB05_RS04430 PF00128 Alpha amylase, catalytic domain CQB05_RS04430 PF11896 Domain of unknown function (DUF3416) CQB05_RS04435 PF16657 Maltogenic Amylase, C-terminal domain CQB05_RS04435 PF00128 Alpha amylase, catalytic domain CQB05_RS04440 PF05552 Conserved TM helix CQB05_RS04455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CQB05_RS04465 PF03480 Bacterial extracellular solute-binding protein, family 7 CQB05_RS04470 PF02780 Transketolase, C-terminal domain CQB05_RS04470 PF02779 Transketolase, pyrimidine binding domain CQB05_RS04470 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CQB05_RS04475 PF00348 Polyprenyl synthetase CQB05_RS04480 PF02609 Exonuclease VII small subunit CQB05_RS04485 PF00355 Rieske [2Fe-2S] domain CQB05_RS04485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CQB05_RS04495 PF00581 Rhodanese-like domain CQB05_RS04500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS04500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS04505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS04505 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS04505 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS04515 PF05247 Flagellar transcriptional activator (FlhD) CQB05_RS04520 PF05280 Flagellar transcriptional activator (FlhC) CQB05_RS04535 PF01594 AI-2E family transporter CQB05_RS04540 PF12805 FUSC-like inner membrane protein yccS CQB05_RS04545 PF00311 Phosphoenolpyruvate carboxylase CQB05_RS04550 PF03900 Porphobilinogen deaminase, C-terminal domain CQB05_RS04550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CQB05_RS04570 PF12848 ABC transporter CQB05_RS04570 PF00005 ABC transporter CQB05_RS04580 PF01435 Peptidase family M48 CQB05_RS04585 PF10458 Valyl tRNA synthetase tRNA binding arm CQB05_RS04585 PF00133 tRNA synthetases class I (I, L, M and V) CQB05_RS04585 PF08264 Anticodon-binding domain of tRNA CQB05_RS04590 PF00483 Nucleotidyl transferase CQB05_RS04600 PF01206 Sulfurtransferase TusA CQB05_RS04605 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CQB05_RS04605 PF09297 NADH pyrophosphatase zinc ribbon domain CQB05_RS04605 PF00293 NUDIX domain CQB05_RS04610 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS04635 PF03466 LysR substrate binding domain CQB05_RS04640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS04640 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS04640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS04645 PF02515 CoA-transferase family III CQB05_RS04665 PF00175 Oxidoreductase NAD-binding domain CQB05_RS04665 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS04665 PF00970 Oxidoreductase FAD-binding domain CQB05_RS04675 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS04680 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CQB05_RS04685 PF01743 Poly A polymerase head domain CQB05_RS04685 PF12626 Polymerase A arginine-rich C-terminus CQB05_RS04685 PF12627 Probable RNA and SrmB- binding site of polymerase A CQB05_RS04695 PF00308 Bacterial dnaA protein CQB05_RS04700 PF00586 AIR synthase related protein, N-terminal domain CQB05_RS04700 PF02769 AIR synthase related protein, C-terminal domain CQB05_RS04715 PF01965 DJ-1/PfpI family CQB05_RS04720 PF01965 DJ-1/PfpI family CQB05_RS04730 PF00817 impB/mucB/samB family CQB05_RS04730 PF11799 impB/mucB/samB family C-terminal domain CQB05_RS04755 PF01070 FMN-dependent dehydrogenase CQB05_RS04765 PF14814 Bifunctional transglycosylase second domain CQB05_RS04765 PF00912 Transglycosylase CQB05_RS04765 PF00905 Penicillin binding protein transpeptidase domain CQB05_RS04770 PF00672 HAMP domain CQB05_RS04770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS04770 PF02203 Tar ligand binding domain homologue CQB05_RS04800 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS04805 PF14698 Argininosuccinate lyase C-terminal CQB05_RS04805 PF00206 Lyase CQB05_RS04810 PF07694 5TMR of 5TMR-LYT CQB05_RS04810 PF06580 Histidine kinase CQB05_RS04815 PF00072 Response regulator receiver domain CQB05_RS04815 PF04397 LytTr DNA-binding domain CQB05_RS04825 PF14698 Argininosuccinate lyase C-terminal CQB05_RS04825 PF00206 Lyase CQB05_RS04835 PF01738 Dienelactone hydrolase family CQB05_RS04865 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS04870 PF01266 FAD dependent oxidoreductase CQB05_RS04875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS04875 PF03466 LysR substrate binding domain CQB05_RS04900 PF00476 DNA polymerase family A CQB05_RS04900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQB05_RS04900 PF01367 5'-3' exonuclease, C-terminal SAM fold CQB05_RS04900 PF01612 3'-5' exonuclease CQB05_RS04910 PF01636 Phosphotransferase enzyme family CQB05_RS04970 PF00580 UvrD/REP helicase N-terminal domain CQB05_RS04970 PF13361 UvrD-like helicase C-terminal domain CQB05_RS04980 PF01546 Peptidase family M20/M25/M40 CQB05_RS04980 PF07687 Peptidase dimerisation domain CQB05_RS04985 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS05050 PF00158 Sigma-54 interaction domain CQB05_RS05050 PF02954 Bacterial regulatory protein, Fis family CQB05_RS05050 PF00072 Response regulator receiver domain CQB05_RS05055 PF16736 Single Cache-like CQB05_RS05055 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS05055 PF00989 PAS fold CQB05_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS05060 PF00309 Sigma-54 factor, Activator interacting domain (AID) CQB05_RS05060 PF04963 Sigma-54 factor, core binding domain CQB05_RS05060 PF04552 Sigma-54, DNA binding domain CQB05_RS05075 PF07690 Major Facilitator Superfamily CQB05_RS05080 PF00563 EAL domain CQB05_RS05080 PF13426 PAS domain CQB05_RS05080 PF08448 PAS fold CQB05_RS05080 PF08447 PAS fold CQB05_RS05080 PF05231 MASE1 CQB05_RS05080 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS05085 PF00270 DEAD/DEAH box helicase CQB05_RS05085 PF00271 Helicase conserved C-terminal domain CQB05_RS05090 PF00929 Exonuclease CQB05_RS05095 PF01435 Peptidase family M48 CQB05_RS05100 PF01329 Pterin 4 alpha carbinolamine dehydratase CQB05_RS05105 PF03193 RsgA GTPase CQB05_RS05110 PF17113 Regulatory signalling modulator protein AmpE CQB05_RS05110 PF03186 CobD/Cbib protein CQB05_RS05115 PF00293 NUDIX domain CQB05_RS05120 PF01245 Ribosomal protein L19 CQB05_RS05125 PF01746 tRNA (Guanine-1)-methyltransferase CQB05_RS05130 PF05239 PRC-barrel domain CQB05_RS05130 PF01782 RimM N-terminal domain CQB05_RS05135 PF00886 Ribosomal protein S16 CQB05_RS05150 PF01384 Phosphate transporter family CQB05_RS05155 PF01865 Protein of unknown function DUF47 CQB05_RS05160 PF01389 OmpA-like transmembrane domain CQB05_RS05160 PF00691 OmpA family CQB05_RS05165 PF00005 ABC transporter CQB05_RS05170 PF00005 ABC transporter CQB05_RS05170 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQB05_RS05175 PF11862 Domain of unknown function (DUF3382) CQB05_RS05175 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS05180 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS05185 PF02203 Tar ligand binding domain homologue CQB05_RS05185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS05185 PF00672 HAMP domain CQB05_RS05190 PF16193 AAA C-terminal domain CQB05_RS05190 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS05190 PF12002 MgsA AAA+ ATPase C terminal CQB05_RS05195 PF03167 Uracil DNA glycosylase superfamily CQB05_RS05210 PF03548 Outer membrane lipoprotein carrier protein LolA CQB05_RS05220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS05225 PF00830 Ribosomal L28 family CQB05_RS05230 PF00471 Ribosomal protein L33 CQB05_RS05235 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS05235 PF00155 Aminotransferase class I and II CQB05_RS05250 PF01029 NusB family CQB05_RS05250 PF01189 16S rRNA methyltransferase RsmB/F CQB05_RS05255 PF00544 Pectate lyase CQB05_RS05270 PF00551 Formyl transferase CQB05_RS05275 PF04337 Protein of unknown function, DUF480 CQB05_RS05280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS05280 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS05280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS05285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS05285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS05285 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS05295 PF00553 Cellulose binding domain CQB05_RS05295 PF00041 Fibronectin type III domain CQB05_RS05295 PF00704 Glycosyl hydrolases family 18 CQB05_RS05305 PF02203 Tar ligand binding domain homologue CQB05_RS05305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS05305 PF00672 HAMP domain CQB05_RS05310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CQB05_RS05320 PF03480 Bacterial extracellular solute-binding protein, family 7 CQB05_RS05330 PF01687 Riboflavin kinase CQB05_RS05330 PF06574 FAD synthetase CQB05_RS05335 PF08264 Anticodon-binding domain of tRNA CQB05_RS05335 PF00133 tRNA synthetases class I (I, L, M and V) CQB05_RS05335 PF06827 Zinc finger found in FPG and IleRS CQB05_RS05340 PF01252 Signal peptidase (SPase) II CQB05_RS05350 PF00356 Bacterial regulatory proteins, lacI family CQB05_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS05370 PF08402 TOBE domain CQB05_RS05370 PF00005 ABC transporter CQB05_RS05375 PF00149 Calcineurin-like phosphoesterase CQB05_RS05385 PF05598 Transposase domain (DUF772) CQB05_RS05385 PF01609 Transposase DDE domain CQB05_RS05390 PF02690 Na+/Pi-cotransporter CQB05_RS05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS05405 PF03466 LysR substrate binding domain CQB05_RS05415 PF13593 SBF-like CPA transporter family (DUF4137) CQB05_RS05430 PF08240 Alcohol dehydrogenase GroES-like domain CQB05_RS05430 PF00107 Zinc-binding dehydrogenase CQB05_RS05435 PF00892 EamA-like transporter family CQB05_RS05505 PF05593 RHS Repeat CQB05_RS05505 PF03527 RHS protein CQB05_RS05530 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS05530 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS05560 PF07690 Major Facilitator Superfamily CQB05_RS05580 PF00005 ABC transporter CQB05_RS05585 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQB05_RS05585 PF00005 ABC transporter CQB05_RS05595 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS05605 PF00375 Sodium:dicarboxylate symporter family CQB05_RS05630 PF01292 Prokaryotic cytochrome b561 CQB05_RS05645 PF00364 Biotin-requiring enzyme CQB05_RS05645 PF00289 Biotin carboxylase, N-terminal domain CQB05_RS05645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQB05_RS05645 PF02785 Biotin carboxylase C-terminal domain CQB05_RS05650 PF02682 Carboxyltransferase domain, subdomain C and D CQB05_RS05655 PF07286 Protein of unknown function (DUF1445) CQB05_RS05660 PF03746 LamB/YcsF family CQB05_RS05665 PF07690 Major Facilitator Superfamily CQB05_RS05680 PF01494 FAD binding domain CQB05_RS05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS05685 PF00672 HAMP domain CQB05_RS05685 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS05690 PF01070 FMN-dependent dehydrogenase CQB05_RS05715 PF08448 PAS fold CQB05_RS05715 PF00563 EAL domain CQB05_RS05715 PF08447 PAS fold CQB05_RS05715 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS05720 PF00072 Response regulator receiver domain CQB05_RS05725 PF01627 Hpt domain CQB05_RS05725 PF00072 Response regulator receiver domain CQB05_RS05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS05725 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS05730 PF00547 Urease, gamma subunit CQB05_RS05740 PF00699 Urease beta subunit CQB05_RS05745 PF00449 Urease alpha-subunit, N-terminal domain CQB05_RS05745 PF01979 Amidohydrolase family CQB05_RS05755 PF05194 UreE urease accessory protein, C-terminal domain CQB05_RS05755 PF02814 UreE urease accessory protein, N-terminal domain CQB05_RS05760 PF01730 UreF CQB05_RS05765 PF02492 CobW/HypB/UreG, nucleotide-binding domain CQB05_RS05780 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS05810 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS05825 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS05825 PF13426 PAS domain CQB05_RS05825 PF00563 EAL domain CQB05_RS05830 PF03705 CheR methyltransferase, all-alpha domain CQB05_RS05830 PF01739 CheR methyltransferase, SAM binding domain CQB05_RS05840 PF01339 CheB methylesterase CQB05_RS05840 PF00072 Response regulator receiver domain CQB05_RS05845 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS05845 PF14245 Type IV pilin PilA CQB05_RS05850 PF14245 Type IV pilin PilA CQB05_RS05850 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS05855 PF05567 Neisseria PilC beta-propeller domain CQB05_RS05875 PF01872 RibD C-terminal domain CQB05_RS05875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQB05_RS05885 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQB05_RS05920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS05920 PF00072 Response regulator receiver domain CQB05_RS05920 PF13426 PAS domain CQB05_RS05950 PF04545 Sigma-70, region 4 CQB05_RS05950 PF04542 Sigma-70 region 2 CQB05_RS05970 PF00106 short chain dehydrogenase CQB05_RS05990 PF01725 Ham1 family CQB05_RS05995 PF03725 3' exoribonuclease family, domain 2 CQB05_RS05995 PF01138 3' exoribonuclease family, domain 1 CQB05_RS06005 PF00069 Protein kinase domain CQB05_RS06005 PF03793 PASTA domain CQB05_RS06010 PF08340 Domain of unknown function (DUF1732) CQB05_RS06010 PF03755 YicC-like family, N-terminal region CQB05_RS06015 PF00625 Guanylate kinase CQB05_RS06020 PF01192 RNA polymerase Rpb6 CQB05_RS06025 PF13291 ACT domain CQB05_RS06025 PF02824 TGS domain CQB05_RS06025 PF04607 Region found in RelA / SpoT proteins CQB05_RS06055 PF00331 Glycosyl hydrolase family 10 CQB05_RS06055 PF00553 Cellulose binding domain CQB05_RS06055 PF03422 Carbohydrate binding module (family 6) CQB05_RS06060 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS06060 PF00072 Response regulator receiver domain CQB05_RS06070 PF01628 HrcA protein C terminal domain CQB05_RS06070 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CQB05_RS06075 PF00239 Resolvase, N terminal domain CQB05_RS06120 PF01513 ATP-NAD kinase CQB05_RS06125 PF02463 RecF/RecN/SMC N terminal domain CQB05_RS06130 PF03668 P-loop ATPase protein family CQB05_RS06135 PF10576 Iron-sulfur binding domain of endonuclease III CQB05_RS06135 PF00633 Helix-hairpin-helix motif CQB05_RS06135 PF00730 HhH-GPD superfamily base excision DNA repair protein CQB05_RS06135 PF14815 NUDIX domain CQB05_RS06145 PF06827 Zinc finger found in FPG and IleRS CQB05_RS06145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CQB05_RS06145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CQB05_RS06160 PF00288 GHMP kinases N terminal domain CQB05_RS06160 PF08544 GHMP kinases C terminal CQB05_RS06170 PF14572 Phosphoribosyl synthetase-associated domain CQB05_RS06170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CQB05_RS06175 PF01386 Ribosomal L25p family CQB05_RS06175 PF14693 Ribosomal protein TL5, C-terminal domain CQB05_RS06180 PF01195 Peptidyl-tRNA hydrolase CQB05_RS06185 PF00037 4Fe-4S binding domain CQB05_RS06190 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS06195 PF12911 N-terminal TM domain of oligopeptide transport permease C CQB05_RS06195 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS06200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQB05_RS06200 PF00005 ABC transporter CQB05_RS06205 PF00005 ABC transporter CQB05_RS06205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQB05_RS06215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQB05_RS06230 PF13378 Enolase C-terminal domain-like CQB05_RS06230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQB05_RS06235 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS06240 PF00356 Bacterial regulatory proteins, lacI family CQB05_RS06240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CQB05_RS06270 PF01227 GTP cyclohydrolase I CQB05_RS06275 PF13091 PLD-like domain CQB05_RS06285 PF00072 Response regulator receiver domain CQB05_RS06290 PF00293 NUDIX domain CQB05_RS06300 PF00152 tRNA synthetases class II (D, K and N) CQB05_RS06300 PF01336 OB-fold nucleic acid binding domain CQB05_RS06300 PF02938 GAD domain CQB05_RS06320 PF03109 ABC1 family CQB05_RS06335 PF01209 ubiE/COQ5 methyltransferase family CQB05_RS06345 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS06360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQB05_RS06360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQB05_RS06365 PF13416 Bacterial extracellular solute-binding protein CQB05_RS06370 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS06380 PF17912 MalK OB fold domain CQB05_RS06380 PF00005 ABC transporter CQB05_RS06390 PF03009 Glycerophosphoryl diester phosphodiesterase family CQB05_RS06395 PF12794 Mechanosensitive ion channel inner membrane domain 1 CQB05_RS06395 PF12795 Mechanosensitive ion channel porin domain CQB05_RS06395 PF00924 Mechanosensitive ion channel CQB05_RS06400 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS06435 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CQB05_RS06435 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CQB05_RS06435 PF01488 Shikimate / quinate 5-dehydrogenase CQB05_RS06440 PF00472 RF-1 domain CQB05_RS06440 PF03462 PCRF domain CQB05_RS06450 PF00462 Glutaredoxin CQB05_RS06455 PF02190 ATP-dependent protease La (LON) substrate-binding domain CQB05_RS06455 PF05362 Lon protease (S16) C-terminal proteolytic domain CQB05_RS06455 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS06460 PF00571 CBS domain CQB05_RS06460 PF01595 Cyclin M transmembrane N-terminal domain CQB05_RS06460 PF03471 Transporter associated domain CQB05_RS06465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CQB05_RS06465 PF01464 Transglycosylase SLT domain CQB05_RS06470 PF03129 Anticodon binding domain CQB05_RS06470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQB05_RS06470 PF04073 Aminoacyl-tRNA editing domain CQB05_RS06475 PF00293 NUDIX domain CQB05_RS06480 PF01472 PUA domain CQB05_RS06480 PF00696 Amino acid kinase family CQB05_RS06485 PF01018 GTP1/OBG CQB05_RS06485 PF01926 50S ribosome-binding GTPase CQB05_RS06490 PF01016 Ribosomal L27 protein CQB05_RS06495 PF00829 Ribosomal prokaryotic L21 protein CQB05_RS06500 PF00348 Polyprenyl synthetase CQB05_RS06510 PF07687 Peptidase dimerisation domain CQB05_RS06510 PF01546 Peptidase family M20/M25/M40 CQB05_RS06515 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS06520 PF03466 LysR substrate binding domain CQB05_RS06525 PF00437 Type II/IV secretion system protein CQB05_RS06525 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQB05_RS06530 PF00482 Type II secretion system (T2SS), protein F CQB05_RS06535 PF06750 Bacterial Peptidase A24 N-terminal domain CQB05_RS06535 PF01478 Type IV leader peptidase family CQB05_RS06540 PF01121 Dephospho-CoA kinase CQB05_RS06545 PF07072 Cell division protein CQB05_RS06550 PF03884 DNA gyrase inhibitor YacG CQB05_RS06555 PF00293 NUDIX domain CQB05_RS06565 PF01960 ArgJ family CQB05_RS06570 PF02810 SEC-C motif CQB05_RS06570 PF07517 SecA DEAD-like domain CQB05_RS06570 PF07516 SecA Wing and Scaffold domain CQB05_RS06570 PF01043 SecA preprotein cross-linking domain CQB05_RS06575 PF08525 Opacity-associated protein A N-terminal motif CQB05_RS06575 PF01476 LysM domain CQB05_RS06575 PF01551 Peptidase family M23 CQB05_RS06590 PF04386 Stringent starvation protein B CQB05_RS06595 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS06595 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS06600 PF02167 Cytochrome C1 family CQB05_RS06610 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CQB05_RS06610 PF00355 Rieske [2Fe-2S] domain CQB05_RS06615 PF01741 Large-conductance mechanosensitive channel, MscL CQB05_RS06620 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CQB05_RS06625 PF00005 ABC transporter CQB05_RS06630 PF02687 FtsX-like permease family CQB05_RS06630 PF12704 MacB-like periplasmic core domain CQB05_RS06640 PF02272 DHHA1 domain CQB05_RS06640 PF01368 DHH family CQB05_RS06640 PF17768 RecJ OB domain CQB05_RS06650 PF00155 Aminotransferase class I and II CQB05_RS06655 PF07690 Major Facilitator Superfamily CQB05_RS06660 PF02811 PHP domain CQB05_RS06665 PF01300 Telomere recombination CQB05_RS06675 PF02163 Peptidase family M50 CQB05_RS06680 PF00579 tRNA synthetases class I (W and Y) CQB05_RS06685 PF03527 RHS protein CQB05_RS06685 PF15606 Bacterial toxin 34 CQB05_RS06685 PF05593 RHS Repeat CQB05_RS06710 PF00202 Aminotransferase class-III CQB05_RS06740 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CQB05_RS06745 PF00005 ABC transporter CQB05_RS06745 PF00664 ABC transporter transmembrane region CQB05_RS06755 PF00551 Formyl transferase CQB05_RS06765 PF00593 TonB dependent receptor CQB05_RS06765 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS06770 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS06770 PF00668 Condensation domain CQB05_RS06770 PF00550 Phosphopantetheine attachment site CQB05_RS06770 PF00975 Thioesterase domain CQB05_RS06770 PF00501 AMP-binding enzyme CQB05_RS06775 PF00668 Condensation domain CQB05_RS06775 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS06775 PF00501 AMP-binding enzyme CQB05_RS06775 PF00550 Phosphopantetheine attachment site CQB05_RS06780 PF00550 Phosphopantetheine attachment site CQB05_RS06780 PF00668 Condensation domain CQB05_RS06780 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS06780 PF00501 AMP-binding enzyme CQB05_RS06780 PF00975 Thioesterase domain CQB05_RS06790 PF00668 Condensation domain CQB05_RS06790 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS06790 PF00550 Phosphopantetheine attachment site CQB05_RS06790 PF00501 AMP-binding enzyme CQB05_RS06800 PF00975 Thioesterase domain CQB05_RS06800 PF00550 Phosphopantetheine attachment site CQB05_RS06800 PF00668 Condensation domain CQB05_RS06800 PF00501 AMP-binding enzyme CQB05_RS06800 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS06805 PF03621 MbtH-like protein CQB05_RS06825 PF00012 Hsp70 protein CQB05_RS06830 PF00012 Hsp70 protein CQB05_RS06865 PF00654 Voltage gated chloride channel CQB05_RS06875 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS06875 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS06875 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS06875 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS06880 PF05193 Peptidase M16 inactive domain CQB05_RS06880 PF00675 Insulinase (Peptidase family M16) CQB05_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS06890 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS06895 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS06905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQB05_RS06910 PF00920 Dehydratase family CQB05_RS06925 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS06925 PF00563 EAL domain CQB05_RS06925 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS06955 PF02403 Seryl-tRNA synthetase N-terminal domain CQB05_RS06955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQB05_RS06960 PF13291 ACT domain CQB05_RS06960 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS06965 PF01368 DHH family CQB05_RS06965 PF02272 DHHA1 domain CQB05_RS06965 PF00571 CBS domain CQB05_RS06965 PF01743 Poly A polymerase head domain CQB05_RS06970 PF01595 Cyclin M transmembrane N-terminal domain CQB05_RS06970 PF00571 CBS domain CQB05_RS06970 PF03471 Transporter associated domain CQB05_RS06975 PF02401 LytB protein CQB05_RS06980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQB05_RS06985 PF04002 RadC-like JAB domain CQB05_RS07005 PF01713 Smr domain CQB05_RS07005 PF00488 MutS domain V CQB05_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS07015 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS07015 PF00072 Response regulator receiver domain CQB05_RS07030 PF00149 Calcineurin-like phosphoesterase CQB05_RS07030 PF02872 5'-nucleotidase, C-terminal domain CQB05_RS07035 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS07035 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS07060 PF03527 RHS protein CQB05_RS07060 PF05593 RHS Repeat CQB05_RS07080 PF05593 RHS Repeat CQB05_RS07080 PF03527 RHS protein CQB05_RS07105 PF00550 Phosphopantetheine attachment site CQB05_RS07115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CQB05_RS07115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CQB05_RS07120 PF01554 MatE CQB05_RS07125 PF00501 AMP-binding enzyme CQB05_RS07125 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS07130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CQB05_RS07130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CQB05_RS07155 PF03472 Autoinducer binding domain CQB05_RS07155 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS07160 PF00765 Autoinducer synthase CQB05_RS07165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS07165 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS07165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS07180 PF01425 Amidase CQB05_RS07185 PF13458 Periplasmic binding protein CQB05_RS07190 PF00005 ABC transporter CQB05_RS07195 PF00005 ABC transporter CQB05_RS07195 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQB05_RS07200 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS07200 PF11862 Domain of unknown function (DUF3382) CQB05_RS07205 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS07210 PF01425 Amidase CQB05_RS07215 PF00171 Aldehyde dehydrogenase family CQB05_RS07220 PF03466 LysR substrate binding domain CQB05_RS07220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS07235 PF02634 FdhD/NarQ family CQB05_RS07240 PF00384 Molybdopterin oxidoreductase CQB05_RS07245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS07245 PF00672 HAMP domain CQB05_RS07245 PF02203 Tar ligand binding domain homologue CQB05_RS07250 PF07690 Major Facilitator Superfamily CQB05_RS07255 PF10609 NUBPL iron-transfer P-loop NTPase CQB05_RS07270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQB05_RS07270 PF00205 Thiamine pyrophosphate enzyme, central domain CQB05_RS07270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQB05_RS07275 PF09334 tRNA synthetases class I (M) CQB05_RS07275 PF01588 Putative tRNA binding domain CQB05_RS07300 PF02616 Segregation and condensation protein ScpA CQB05_RS07305 PF02910 Fumarate reductase flavoprotein C-term CQB05_RS07305 PF00890 FAD binding domain CQB05_RS07310 PF00202 Aminotransferase class-III CQB05_RS07320 PF00155 Aminotransferase class I and II CQB05_RS07330 PF01242 6-pyruvoyl tetrahydropterin synthase CQB05_RS07350 PF00425 chorismate binding enzyme CQB05_RS07350 PF04715 Anthranilate synthase component I, N terminal region CQB05_RS07355 PF02445 Quinolinate synthetase A protein CQB05_RS07360 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CQB05_RS07360 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CQB05_RS07365 PF02548 Ketopantoate hydroxymethyltransferase CQB05_RS07370 PF02569 Pantoate-beta-alanine ligase CQB05_RS07375 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CQB05_RS07375 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CQB05_RS07380 PF02556 Preprotein translocase subunit SecB CQB05_RS07385 PF00462 Glutaredoxin CQB05_RS07390 PF00581 Rhodanese-like domain CQB05_RS07395 PF00300 Histidine phosphatase superfamily (branch 1) CQB05_RS07400 PF03572 Peptidase family S41 CQB05_RS07400 PF13180 PDZ domain CQB05_RS07405 PF00899 ThiF family CQB05_RS07415 PF00072 Response regulator receiver domain CQB05_RS07415 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS07420 PF05231 MASE1 CQB05_RS07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS07420 PF07730 Histidine kinase CQB05_RS07425 PF07043 Protein of unknown function (DUF1328) CQB05_RS07445 PF10005 zinc-ribbon domain CQB05_RS07445 PF15887 Putative zinc-binding metallo-peptidase CQB05_RS07450 PF01467 Cytidylyltransferase-like CQB05_RS07460 PF05193 Peptidase M16 inactive domain CQB05_RS07465 PF05193 Peptidase M16 inactive domain CQB05_RS07465 PF00675 Insulinase (Peptidase family M16) CQB05_RS07470 PF02881 SRP54-type protein, helical bundle domain CQB05_RS07470 PF00448 SRP54-type protein, GTPase domain CQB05_RS07475 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQB05_RS07485 PF03812 2-keto-3-deoxygluconate permease CQB05_RS07500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS07500 PF02203 Tar ligand binding domain homologue CQB05_RS07500 PF00672 HAMP domain CQB05_RS07505 PF12833 Helix-turn-helix domain CQB05_RS07505 PF01965 DJ-1/PfpI family CQB05_RS07510 PF01965 DJ-1/PfpI family CQB05_RS07515 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS07520 PF01554 MatE CQB05_RS07525 PF01914 MarC family integral membrane protein CQB05_RS07540 PF00155 Aminotransferase class I and II CQB05_RS07550 PF08402 TOBE domain CQB05_RS07550 PF00005 ABC transporter CQB05_RS07560 PF03466 LysR substrate binding domain CQB05_RS07560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS07570 PF00140 Sigma-70 factor, region 1.2 CQB05_RS07570 PF04542 Sigma-70 region 2 CQB05_RS07570 PF04545 Sigma-70, region 4 CQB05_RS07590 PF02630 SCO1/SenC CQB05_RS07595 PF01040 UbiA prenyltransferase family CQB05_RS07600 PF02628 Cytochrome oxidase assembly protein CQB05_RS07620 PF00510 Cytochrome c oxidase subunit III CQB05_RS07630 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CQB05_RS07635 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQB05_RS07640 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CQB05_RS07640 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CQB05_RS07645 PF08241 Methyltransferase domain CQB05_RS07655 PF00588 SpoU rRNA Methylase family CQB05_RS07660 PF03466 LysR substrate binding domain CQB05_RS07660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS07670 PF01575 MaoC like domain CQB05_RS07675 PF13614 AAA domain CQB05_RS07680 PF01810 LysE type translocator CQB05_RS07685 PF00999 Sodium/hydrogen exchanger family CQB05_RS07685 PF02254 TrkA-N domain CQB05_RS07690 PF00593 TonB dependent receptor CQB05_RS07690 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS07710 PF01292 Prokaryotic cytochrome b561 CQB05_RS07715 PF12802 MarR family CQB05_RS07720 PF00672 HAMP domain CQB05_RS07720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS07720 PF02203 Tar ligand binding domain homologue CQB05_RS07725 PF07690 Major Facilitator Superfamily CQB05_RS07730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQB05_RS07730 PF00034 Cytochrome c CQB05_RS07730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CQB05_RS07735 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS07735 PF01799 [2Fe-2S] binding domain CQB05_RS07740 PF01494 FAD binding domain CQB05_RS07745 PF17645 Arylmalonate decarboxylase CQB05_RS07750 PF00561 alpha/beta hydrolase fold CQB05_RS07760 PF00857 Isochorismatase family CQB05_RS07765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQB05_RS07765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CQB05_RS07765 PF00034 Cytochrome c CQB05_RS07785 PF00723 Glycosyl hydrolases family 15 CQB05_RS07790 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS07795 PF02426 Muconolactone delta-isomerase CQB05_RS07800 PF02667 Short chain fatty acid transporter CQB05_RS07805 PF00106 short chain dehydrogenase CQB05_RS07820 PF12146 Serine aminopeptidase, S33 CQB05_RS07825 PF02803 Thiolase, C-terminal domain CQB05_RS07825 PF00108 Thiolase, N-terminal domain CQB05_RS07830 PF01144 Coenzyme A transferase CQB05_RS07835 PF01144 Coenzyme A transferase CQB05_RS07840 PF09339 IclR helix-turn-helix domain CQB05_RS07840 PF01614 Bacterial transcriptional regulator CQB05_RS07865 PF00034 Cytochrome c CQB05_RS07870 PF17862 AAA+ lid domain CQB05_RS07870 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS07870 PF01434 Peptidase family M41 CQB05_RS07890 PF04357 TamB, inner membrane protein subunit of TAM complex CQB05_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS07925 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS07930 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS07930 PF00072 Response regulator receiver domain CQB05_RS07935 PF13180 PDZ domain CQB05_RS07950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQB05_RS07965 PF09704 CRISPR-associated protein (Cas_Cas5) CQB05_RS07980 PF00296 Luciferase-like monooxygenase CQB05_RS07985 PF00482 Type II secretion system (T2SS), protein F CQB05_RS08010 PF00664 ABC transporter transmembrane region CQB05_RS08010 PF00005 ABC transporter CQB05_RS08015 PF08443 RimK-like ATP-grasp domain CQB05_RS08015 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS08015 PF08245 Mur ligase middle domain CQB05_RS08020 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS08020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQB05_RS08020 PF08245 Mur ligase middle domain CQB05_RS08025 PF05981 CreA protein CQB05_RS08030 PF03466 LysR substrate binding domain CQB05_RS08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS08040 PF02515 CoA-transferase family III CQB05_RS08050 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS08060 PF13532 2OG-Fe(II) oxygenase superfamily CQB05_RS08075 PF00199 Catalase CQB05_RS08075 PF06628 Catalase-related immune-responsive CQB05_RS08075 PF18011 C-terminal domain found in long catalases CQB05_RS08080 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS08080 PF00072 Response regulator receiver domain CQB05_RS08085 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS08085 PF00672 HAMP domain CQB05_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS08090 PF01339 CheB methylesterase CQB05_RS08095 PF03705 CheR methyltransferase, all-alpha domain CQB05_RS08095 PF01739 CheR methyltransferase, SAM binding domain CQB05_RS08100 PF00072 Response regulator receiver domain CQB05_RS08100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CQB05_RS08100 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS08100 PF00672 HAMP domain CQB05_RS08100 PF01627 Hpt domain CQB05_RS08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS08110 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS08120 PF00593 TonB dependent receptor CQB05_RS08120 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS08130 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS08135 PF12911 N-terminal TM domain of oligopeptide transport permease C CQB05_RS08135 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS08140 PF00005 ABC transporter CQB05_RS08145 PF00271 Helicase conserved C-terminal domain CQB05_RS08145 PF09382 RQC domain CQB05_RS08145 PF16124 RecQ zinc-binding CQB05_RS08145 PF00570 HRDC domain CQB05_RS08145 PF00270 DEAD/DEAH box helicase CQB05_RS08160 PF14220 Domain of unknown function (DUF4329) CQB05_RS08160 PF14220 Domain of unknown function (DUF4329) CQB05_RS08160 PF05593 RHS Repeat CQB05_RS08160 PF03527 RHS protein CQB05_RS08160 PF03527 RHS protein CQB05_RS08160 PF05593 RHS Repeat CQB05_RS08165 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS08165 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS08180 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CQB05_RS08180 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CQB05_RS08185 PF03450 CO dehydrogenase flavoprotein C-terminal domain CQB05_RS08185 PF00941 FAD binding domain in molybdopterin dehydrogenase CQB05_RS08190 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS08190 PF10518 TAT (twin-arginine translocation) pathway signal sequence CQB05_RS08190 PF01799 [2Fe-2S] binding domain CQB05_RS08205 PF08240 Alcohol dehydrogenase GroES-like domain CQB05_RS08205 PF13823 Alcohol dehydrogenase GroES-associated CQB05_RS08205 PF00107 Zinc-binding dehydrogenase CQB05_RS08215 PF00881 Nitroreductase family CQB05_RS08230 PF00149 Calcineurin-like phosphoesterase CQB05_RS08230 PF02872 5'-nucleotidase, C-terminal domain CQB05_RS08235 PF03466 LysR substrate binding domain CQB05_RS08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS08240 PF03601 Conserved hypothetical protein 698 CQB05_RS08250 PF03449 Transcription elongation factor, N-terminal CQB05_RS08250 PF01272 Transcription elongation factor, GreA/GreB, C-term CQB05_RS08265 PF03631 Virulence factor BrkB CQB05_RS08275 PF12146 Serine aminopeptidase, S33 CQB05_RS08285 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CQB05_RS08290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQB05_RS08290 PF00361 Proton-conducting membrane transporter CQB05_RS08295 PF03466 LysR substrate binding domain CQB05_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS08300 PF01380 SIS domain CQB05_RS08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS08315 PF00132 Bacterial transferase hexapeptide (six repeats) CQB05_RS08315 PF12804 MobA-like NTP transferase domain CQB05_RS08320 PF13545 Crp-like helix-turn-helix domain CQB05_RS08320 PF00027 Cyclic nucleotide-binding domain CQB05_RS08340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS08340 PF03466 LysR substrate binding domain CQB05_RS08345 PF01479 S4 domain CQB05_RS08345 PF00579 tRNA synthetases class I (W and Y) CQB05_RS08355 PF03702 Anhydro-N-acetylmuramic acid kinase CQB05_RS08365 PF01521 Iron-sulphur cluster biosynthesis CQB05_RS08380 PF00380 Ribosomal protein S9/S16 CQB05_RS08385 PF00572 Ribosomal protein L13 CQB05_RS08390 PF13360 PQQ-like domain CQB05_RS08390 PF00069 Protein kinase domain CQB05_RS08395 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CQB05_RS08400 PF03330 Lytic transglycolase CQB05_RS08410 PF02219 Methylenetetrahydrofolate reductase CQB05_RS08415 PF01479 S4 domain CQB05_RS08415 PF01728 FtsJ-like methyltransferase CQB05_RS08420 PF05221 S-adenosyl-L-homocysteine hydrolase CQB05_RS08420 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CQB05_RS08425 PF01757 Acyltransferase family CQB05_RS08430 PF16658 Class II release factor RF3, C-terminal domain CQB05_RS08430 PF03144 Elongation factor Tu domain 2 CQB05_RS08430 PF00009 Elongation factor Tu GTP binding domain CQB05_RS08440 PF00893 Small Multidrug Resistance protein CQB05_RS08470 PF00005 ABC transporter CQB05_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS08480 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS08485 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS08490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS08495 PF03466 LysR substrate binding domain CQB05_RS08500 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CQB05_RS08505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CQB05_RS08505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CQB05_RS08510 PF03480 Bacterial extracellular solute-binding protein, family 7 CQB05_RS08515 PF00664 ABC transporter transmembrane region CQB05_RS08515 PF00005 ABC transporter CQB05_RS08520 PF03061 Thioesterase superfamily CQB05_RS08530 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS08535 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS08545 PF00108 Thiolase, N-terminal domain CQB05_RS08545 PF02803 Thiolase, C-terminal domain CQB05_RS08555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQB05_RS08555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQB05_RS08555 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS08565 PF12806 Acetyl-CoA dehydrogenase C-terminal like CQB05_RS08565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS08565 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS08565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS08810 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS08810 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS08810 PF00563 EAL domain CQB05_RS08815 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS08835 PF00005 ABC transporter CQB05_RS08840 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQB05_RS08840 PF00005 ABC transporter CQB05_RS08850 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS08860 PF00501 AMP-binding enzyme CQB05_RS08860 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS08865 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CQB05_RS08870 PF01641 SelR domain CQB05_RS08875 PF04279 Intracellular septation protein A CQB05_RS08905 PF01176 Translation initiation factor 1A / IF-1 CQB05_RS08910 PF02666 Phosphatidylserine decarboxylase CQB05_RS08925 PF00892 EamA-like transporter family CQB05_RS08940 PF01979 Amidohydrolase family CQB05_RS08955 PF17391 Urocanase N-terminal domain CQB05_RS08955 PF17392 Urocanase C-terminal domain CQB05_RS08955 PF01175 Urocanase Rossmann-like domain CQB05_RS08960 PF00221 Aromatic amino acid lyase CQB05_RS08965 PF07702 UTRA domain CQB05_RS08965 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS08970 PF00005 ABC transporter CQB05_RS08975 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS08985 PF08678 Rsbr N terminal CQB05_RS08985 PF01740 STAS domain CQB05_RS08990 PF01740 STAS domain CQB05_RS08995 PF13581 Histidine kinase-like ATPase domain CQB05_RS09005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS09005 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS09010 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS09015 PF00072 Response regulator receiver domain CQB05_RS09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS09015 PF13426 PAS domain CQB05_RS09045 PF00483 Nucleotidyl transferase CQB05_RS09050 PF00128 Alpha amylase, catalytic domain CQB05_RS09050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CQB05_RS09055 PF11941 Domain of unknown function (DUF3459) CQB05_RS09055 PF00128 Alpha amylase, catalytic domain CQB05_RS09060 PF00128 Alpha amylase, catalytic domain CQB05_RS09065 PF08323 Starch synthase catalytic domain CQB05_RS09065 PF00534 Glycosyl transferases group 1 CQB05_RS09080 PF08461 Ribonuclease R winged-helix domain CQB05_RS09080 PF17876 Cold shock domain CQB05_RS09080 PF00773 RNB domain CQB05_RS09080 PF00575 S1 RNA binding domain CQB05_RS09080 PF08206 Ribonuclease B OB domain CQB05_RS09105 PF01464 Transglycosylase SLT domain CQB05_RS09105 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CQB05_RS09110 PF00464 Serine hydroxymethyltransferase CQB05_RS09115 PF03477 ATP cone domain CQB05_RS09125 PF01264 Chorismate synthase CQB05_RS09130 PF00005 ABC transporter CQB05_RS09130 PF00571 CBS domain CQB05_RS09135 PF01053 Cys/Met metabolism PLP-dependent enzyme CQB05_RS09145 PF13419 Haloacid dehalogenase-like hydrolase CQB05_RS09150 PF00762 Ferrochelatase CQB05_RS09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS09155 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS09155 PF00989 PAS fold CQB05_RS09155 PF16736 Single Cache-like CQB05_RS09160 PF00072 Response regulator receiver domain CQB05_RS09160 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS09175 PF10605 3HB-oligomer hydrolase (3HBOH) CQB05_RS09185 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS09185 PF00593 TonB dependent receptor CQB05_RS09195 PF01970 Tripartite tricarboxylate transporter TctA family CQB05_RS09205 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS09210 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS09210 PF00072 Response regulator receiver domain CQB05_RS09215 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS09215 PF08521 Two-component sensor kinase N-terminal CQB05_RS09220 PF02417 Chromate transporter CQB05_RS09230 PF00248 Aldo/keto reductase family CQB05_RS09235 PF02146 Sir2 family CQB05_RS09240 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQB05_RS09240 PF00588 SpoU rRNA Methylase family CQB05_RS09245 PF00005 ABC transporter CQB05_RS09250 PF13472 GDSL-like Lipase/Acylhydrolase family CQB05_RS09260 PF01053 Cys/Met metabolism PLP-dependent enzyme CQB05_RS09270 PF01740 STAS domain CQB05_RS09270 PF00916 Sulfate permease family CQB05_RS09280 PF10609 NUBPL iron-transfer P-loop NTPase CQB05_RS09285 PF17773 UPF0176 acylphosphatase like domain CQB05_RS09290 PF05726 Pirin C-terminal cupin domain CQB05_RS09290 PF02678 Pirin CQB05_RS09295 PF03358 NADPH-dependent FMN reductase CQB05_RS09300 PF02678 Pirin CQB05_RS09300 PF17954 Quercetinase C-terminal cupin domain CQB05_RS09305 PF03466 LysR substrate binding domain CQB05_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS09315 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQB05_RS09320 PF02390 Putative methyltransferase CQB05_RS09330 PF01411 tRNA synthetases class II (A) CQB05_RS09330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQB05_RS09330 PF02272 DHHA1 domain CQB05_RS09350 PF03466 LysR substrate binding domain CQB05_RS09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS09355 PF03459 TOBE domain CQB05_RS09360 PF00005 ABC transporter CQB05_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS09375 PF00296 Luciferase-like monooxygenase CQB05_RS09385 PF09084 NMT1/THI5 like CQB05_RS09395 PF04362 Bacterial Fe(2+) trafficking CQB05_RS09400 PF01266 FAD dependent oxidoreductase CQB05_RS09400 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CQB05_RS09415 PF01925 Sulfite exporter TauE/SafE CQB05_RS09420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CQB05_RS09420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQB05_RS09430 PF01507 Phosphoadenosine phosphosulfate reductase family CQB05_RS09435 PF00009 Elongation factor Tu GTP binding domain CQB05_RS09440 PF00037 4Fe-4S binding domain CQB05_RS09440 PF11953 Domain of unknown function (DUF3470) CQB05_RS09445 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS09485 PF00069 Protein kinase domain CQB05_RS09490 PF08543 Phosphomethylpyrimidine kinase CQB05_RS09495 PF01266 FAD dependent oxidoreductase CQB05_RS09505 PF05690 Thiazole biosynthesis protein ThiG CQB05_RS09510 PF02581 Thiamine monophosphate synthase CQB05_RS09520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQB05_RS09520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQB05_RS09520 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CQB05_RS09525 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS09530 PF00027 Cyclic nucleotide-binding domain CQB05_RS09530 PF13545 Crp-like helix-turn-helix domain CQB05_RS09540 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS09540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS09540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS09550 PF00211 Adenylate and Guanylate cyclase catalytic domain CQB05_RS09550 PF16701 Adenylate cyclase regulatory domain CQB05_RS09555 PF17676 LD-carboxypeptidase C-terminal domain CQB05_RS09555 PF02016 LD-carboxypeptidase N-terminal domain CQB05_RS09570 PF13458 Periplasmic binding protein CQB05_RS09580 PF01136 Peptidase family U32 CQB05_RS09580 PF12392 Collagenase CQB05_RS09590 PF07676 WD40-like Beta Propeller Repeat CQB05_RS09590 PF00326 Prolyl oligopeptidase family CQB05_RS09595 PF01053 Cys/Met metabolism PLP-dependent enzyme CQB05_RS09600 PF03781 Sulfatase-modifying factor enzyme 1 CQB05_RS09600 PF12867 DinB superfamily CQB05_RS09605 PF10017 Histidine-specific methyltransferase, SAM-dependent CQB05_RS09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS09615 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS09615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CQB05_RS09615 PF00672 HAMP domain CQB05_RS09615 PF00072 Response regulator receiver domain CQB05_RS09615 PF01627 Hpt domain CQB05_RS09620 PF03922 OmpW family CQB05_RS09625 PF05661 Protein of unknown function (DUF808) CQB05_RS09630 PF00563 EAL domain CQB05_RS09630 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS09630 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS09645 PF02769 AIR synthase related protein, C-terminal domain CQB05_RS09645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CQB05_RS09645 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CQB05_RS09650 PF00557 Metallopeptidase family M24 CQB05_RS09655 PF01909 Nucleotidyltransferase domain CQB05_RS09655 PF01966 HD domain CQB05_RS09655 PF08335 GlnD PII-uridylyltransferase CQB05_RS09660 PF01327 Polypeptide deformylase CQB05_RS09675 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CQB05_RS09680 PF04376 Arginine-tRNA-protein transferase, N terminus CQB05_RS09680 PF04377 Arginine-tRNA-protein transferase, C terminus CQB05_RS09685 PF09339 IclR helix-turn-helix domain CQB05_RS09685 PF01614 Bacterial transcriptional regulator CQB05_RS09695 PF08502 LeuA allosteric (dimerisation) domain CQB05_RS09695 PF00682 HMGL-like CQB05_RS09700 PF01066 CDP-alcohol phosphatidyltransferase CQB05_RS09705 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CQB05_RS09705 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CQB05_RS09710 PF10369 Small subunit of acetolactate synthase CQB05_RS09715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQB05_RS09715 PF00205 Thiamine pyrophosphate enzyme, central domain CQB05_RS09715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQB05_RS09720 PF04542 Sigma-70 region 2 CQB05_RS09720 PF08281 Sigma-70, region 4 CQB05_RS09740 PF01219 Prokaryotic diacylglycerol kinase CQB05_RS09750 PF00543 Nitrogen regulatory protein P-II CQB05_RS09755 PF02540 NAD synthase CQB05_RS09755 PF00795 Carbon-nitrogen hydrolase CQB05_RS09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS09765 PF03466 LysR substrate binding domain CQB05_RS09775 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS09780 PF01584 CheW-like domain CQB05_RS09785 PF01144 Coenzyme A transferase CQB05_RS09790 PF01144 Coenzyme A transferase CQB05_RS09805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS09815 PF00141 Peroxidase CQB05_RS09840 PF00199 Catalase CQB05_RS09840 PF06628 Catalase-related immune-responsive CQB05_RS09855 PF08212 Lipocalin-like domain CQB05_RS09865 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS09870 PF00005 ABC transporter CQB05_RS09875 PF01037 Lrp/AsnC ligand binding domain CQB05_RS09880 PF01571 Aminomethyltransferase folate-binding domain CQB05_RS09880 PF08669 Glycine cleavage T-protein C-terminal barrel domain CQB05_RS09885 PF01597 Glycine cleavage H-protein CQB05_RS09895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CQB05_RS09895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQB05_RS09900 PF00072 Response regulator receiver domain CQB05_RS09900 PF13188 PAS domain CQB05_RS09900 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS09900 PF08448 PAS fold CQB05_RS09905 PF00849 RNA pseudouridylate synthase CQB05_RS09910 PF00106 short chain dehydrogenase CQB05_RS09915 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS09925 PF00582 Universal stress protein family CQB05_RS09935 PF07238 PilZ domain CQB05_RS09940 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS09940 PF00501 AMP-binding enzyme CQB05_RS09945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQB05_RS09945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQB05_RS09945 PF01842 ACT domain CQB05_RS09950 PF13458 Periplasmic binding protein CQB05_RS09965 PF00883 Cytosol aminopeptidase family, catalytic domain CQB05_RS09965 PF02789 Cytosol aminopeptidase family, N-terminal domain CQB05_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS09985 PF03466 LysR substrate binding domain CQB05_RS09990 PF00155 Aminotransferase class I and II CQB05_RS10005 PF00005 ABC transporter CQB05_RS10010 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQB05_RS10010 PF00005 ABC transporter CQB05_RS10020 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS10025 PF13458 Periplasmic binding protein CQB05_RS10030 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS10030 PF00501 AMP-binding enzyme CQB05_RS10035 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS10035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS10035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS10050 PF00106 short chain dehydrogenase CQB05_RS10055 PF01494 FAD binding domain CQB05_RS10065 PF12697 Alpha/beta hydrolase family CQB05_RS10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS10070 PF07689 KaiB domain CQB05_RS10070 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS10080 PF11398 Protein of unknown function (DUF2813) CQB05_RS10085 PF13361 UvrD-like helicase C-terminal domain CQB05_RS10085 PF00580 UvrD/REP helicase N-terminal domain CQB05_RS10125 PF02545 Maf-like protein CQB05_RS10135 PF02590 Predicted SPOUT methyltransferase CQB05_RS10145 PF01218 Coproporphyrinogen III oxidase CQB05_RS10150 PF02843 Phosphoribosylglycinamide synthetase, C domain CQB05_RS10150 PF02844 Phosphoribosylglycinamide synthetase, N domain CQB05_RS10150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CQB05_RS10155 PF01709 Transcriptional regulator CQB05_RS10160 PF05872 Bacterial protein of unknown function (DUF853) CQB05_RS10185 PF02913 FAD linked oxidases, C-terminal domain CQB05_RS10185 PF01565 FAD binding domain CQB05_RS10190 PF10397 Adenylosuccinate lyase C-terminus CQB05_RS10190 PF00206 Lyase CQB05_RS10195 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS10200 PF00581 Rhodanese-like domain CQB05_RS10205 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS10210 PF01568 Molydopterin dinucleotide binding domain CQB05_RS10210 PF00384 Molybdopterin oxidoreductase CQB05_RS10215 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS10215 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS10220 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS10220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQB05_RS10220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQB05_RS10225 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS10235 PF13302 Acetyltransferase (GNAT) domain CQB05_RS10245 PF07969 Amidohydrolase family CQB05_RS10280 PF01556 DnaJ C terminal domain CQB05_RS10280 PF00684 DnaJ central domain CQB05_RS10280 PF00226 DnaJ domain CQB05_RS10290 PF00171 Aldehyde dehydrogenase family CQB05_RS10295 PF00107 Zinc-binding dehydrogenase CQB05_RS10295 PF08240 Alcohol dehydrogenase GroES-like domain CQB05_RS10310 PF00158 Sigma-54 interaction domain CQB05_RS10310 PF02954 Bacterial regulatory protein, Fis family CQB05_RS10310 PF01590 GAF domain CQB05_RS10315 PF02146 Sir2 family CQB05_RS10320 PF00929 Exonuclease CQB05_RS10320 PF08411 Exonuclease C-terminal CQB05_RS10330 PF10431 C-terminal, D2-small domain, of ClpB protein CQB05_RS10330 PF02861 Clp amino terminal domain, pathogenicity island component CQB05_RS10330 PF17871 AAA lid domain CQB05_RS10330 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS10330 PF07724 AAA domain (Cdc48 subfamily) CQB05_RS10335 PF02617 ATP-dependent Clp protease adaptor protein ClpS CQB05_RS10340 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQB05_RS10340 PF01336 OB-fold nucleic acid binding domain CQB05_RS10340 PF02811 PHP domain CQB05_RS10340 PF14579 Helix-hairpin-helix motif CQB05_RS10340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQB05_RS10345 PF13525 Outer membrane lipoprotein CQB05_RS10350 PF13307 Helicase C-terminal domain CQB05_RS10350 PF04851 Type III restriction enzyme, res subunit CQB05_RS10365 PF03969 AFG1-like ATPase CQB05_RS10370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS10370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQB05_RS10375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQB05_RS10375 PF02817 e3 binding domain CQB05_RS10375 PF00364 Biotin-requiring enzyme CQB05_RS10380 PF16078 2-oxoglutarate dehydrogenase N-terminus CQB05_RS10380 PF00676 Dehydrogenase E1 component CQB05_RS10380 PF02779 Transketolase, pyrimidine binding domain CQB05_RS10380 PF16870 2-oxoglutarate dehydrogenase C-terminal CQB05_RS10385 PF01594 AI-2E family transporter CQB05_RS10390 PF13426 PAS domain CQB05_RS10390 PF00563 EAL domain CQB05_RS10390 PF08448 PAS fold CQB05_RS10390 PF08447 PAS fold CQB05_RS10390 PF05231 MASE1 CQB05_RS10390 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS10395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQB05_RS10395 PF00005 ABC transporter CQB05_RS10400 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS10400 PF12911 N-terminal TM domain of oligopeptide transport permease C CQB05_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS10410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQB05_RS10420 PF02469 Fasciclin domain CQB05_RS10425 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CQB05_RS10425 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CQB05_RS10425 PF01276 Orn/Lys/Arg decarboxylase, major domain CQB05_RS10435 PF01145 SPFH domain / Band 7 family CQB05_RS10485 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS10490 PF01970 Tripartite tricarboxylate transporter TctA family CQB05_RS10520 PF13419 Haloacid dehalogenase-like hydrolase CQB05_RS10530 PF00691 OmpA family CQB05_RS10535 PF00521 DNA gyrase/topoisomerase IV, subunit A CQB05_RS10535 PF03989 DNA gyrase C-terminal domain, beta-propeller CQB05_RS10540 PF00266 Aminotransferase class-V CQB05_RS10545 PF01842 ACT domain CQB05_RS10545 PF01817 Chorismate mutase type II CQB05_RS10545 PF00800 Prephenate dehydratase CQB05_RS10550 PF02153 Prephenate dehydrogenase CQB05_RS10555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQB05_RS10560 PF00575 S1 RNA binding domain CQB05_RS10565 PF00216 Bacterial DNA-binding protein CQB05_RS10575 PF18073 Rubredoxin metal binding domain CQB05_RS10580 PF00361 Proton-conducting membrane transporter CQB05_RS10580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQB05_RS10580 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CQB05_RS10580 PF13244 Domain of unknown function (DUF4040) CQB05_RS10585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CQB05_RS10590 PF00361 Proton-conducting membrane transporter CQB05_RS10600 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CQB05_RS10610 PF01968 Hydantoinase/oxoprolinase CQB05_RS10610 PF05378 Hydantoinase/oxoprolinase N-terminal region CQB05_RS10630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CQB05_RS10635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CQB05_RS10655 PF02646 RmuC family CQB05_RS10660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQB05_RS10660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQB05_RS10665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CQB05_RS10665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CQB05_RS10680 PF09361 Phasin protein CQB05_RS10695 PF01618 MotA/TolQ/ExbB proton channel family CQB05_RS10700 PF02472 Biopolymer transport protein ExbD/TolR CQB05_RS10710 PF03928 Haem-degrading CQB05_RS10715 PF01027 Inhibitor of apoptosis-promoting Bax1 CQB05_RS10725 PF05958 tRNA (Uracil-5-)-methyltransferase CQB05_RS10735 PF01037 Lrp/AsnC ligand binding domain CQB05_RS10740 PF00171 Aldehyde dehydrogenase family CQB05_RS10740 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CQB05_RS10740 PF14850 DNA-binding domain of Proline dehydrogenase CQB05_RS10740 PF01619 Proline dehydrogenase CQB05_RS10750 PF01032 FecCD transport family CQB05_RS10760 PF00005 ABC transporter CQB05_RS10765 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS10765 PF00593 TonB dependent receptor CQB05_RS10775 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS10775 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS10780 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS10800 PF00293 NUDIX domain CQB05_RS10805 PF00313 'Cold-shock' DNA-binding domain CQB05_RS10820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS10825 PF13649 Methyltransferase domain CQB05_RS10855 PF03527 RHS protein CQB05_RS10855 PF05593 RHS Repeat CQB05_RS10865 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS10865 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS10890 PF03466 LysR substrate binding domain CQB05_RS10915 PF02463 RecF/RecN/SMC N terminal domain CQB05_RS10920 PF01420 Type I restriction modification DNA specificity domain CQB05_RS10925 PF02384 N-6 DNA Methylase CQB05_RS10925 PF12161 HsdM N-terminal domain CQB05_RS10965 PF00589 Phage integrase family CQB05_RS10965 PF13356 Arm DNA-binding domain CQB05_RS10970 PF00117 Glutamine amidotransferase class-I CQB05_RS10970 PF00958 GMP synthase C terminal domain CQB05_RS10970 PF02540 NAD synthase CQB05_RS10985 PF00478 IMP dehydrogenase / GMP reductase domain CQB05_RS10985 PF00571 CBS domain CQB05_RS10995 PF03658 RnfH family Ubiquitin CQB05_RS11000 PF03364 Polyketide cyclase / dehydrase and lipid transport CQB05_RS11005 PF01668 SmpB protein CQB05_RS11015 PF08281 Sigma-70, region 4 CQB05_RS11015 PF04542 Sigma-70 region 2 CQB05_RS11025 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS11035 PF00679 Elongation factor G C-terminus CQB05_RS11035 PF03144 Elongation factor Tu domain 2 CQB05_RS11035 PF00009 Elongation factor Tu GTP binding domain CQB05_RS11040 PF01509 TruB family pseudouridylate synthase (N terminal domain) CQB05_RS11040 PF16198 tRNA pseudouridylate synthase B C-terminal domain CQB05_RS11045 PF02033 Ribosome-binding factor A CQB05_RS11050 PF04760 Translation initiation factor IF-2, N-terminal region CQB05_RS11050 PF08364 Bacterial translation initiation factor IF-2 associated region CQB05_RS11050 PF11987 Translation-initiation factor 2 CQB05_RS11050 PF00009 Elongation factor Tu GTP binding domain CQB05_RS11055 PF13184 NusA-like KH domain CQB05_RS11055 PF00575 S1 RNA binding domain CQB05_RS11055 PF08529 NusA N-terminal domain CQB05_RS11060 PF02576 RimP N-terminal domain CQB05_RS11070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQB05_RS11070 PF00034 Cytochrome c CQB05_RS11070 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CQB05_RS11085 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS11100 PF03466 LysR substrate binding domain CQB05_RS11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS11135 PF02423 Ornithine cyclodeaminase/mu-crystallin family CQB05_RS11140 PF13458 Periplasmic binding protein CQB05_RS11155 PF00899 ThiF family CQB05_RS11165 PF00691 OmpA family CQB05_RS11170 PF07676 WD40-like Beta Propeller Repeat CQB05_RS11170 PF04052 TolB amino-terminal domain CQB05_RS11175 PF00664 ABC transporter transmembrane region CQB05_RS11175 PF00005 ABC transporter CQB05_RS11185 PF01026 TatD related DNase CQB05_RS11200 PF02223 Thymidylate kinase CQB05_RS11205 PF02618 YceG-like family CQB05_RS11210 PF01571 Aminomethyltransferase folate-binding domain CQB05_RS11220 PF07859 alpha/beta hydrolase fold CQB05_RS11225 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQB05_RS11230 PF00465 Iron-containing alcohol dehydrogenase CQB05_RS11245 PF17674 HHH domain CQB05_RS11245 PF09371 Tex-like protein N-terminal domain CQB05_RS11245 PF16921 Tex protein YqgF-like domain CQB05_RS11245 PF00575 S1 RNA binding domain CQB05_RS11270 PF07690 Major Facilitator Superfamily CQB05_RS11275 PF07690 Major Facilitator Superfamily CQB05_RS11315 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQB05_RS11320 PF01053 Cys/Met metabolism PLP-dependent enzyme CQB05_RS11325 PF00156 Phosphoribosyl transferase domain CQB05_RS11330 PF02674 Colicin V production protein CQB05_RS11340 PF08245 Mur ligase middle domain CQB05_RS11340 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS11345 PF03960 ArsC family CQB05_RS11355 PF06865 Pyrimidine/purine nucleoside phosphorylase CQB05_RS11360 PF00764 Arginosuccinate synthase CQB05_RS11365 PF01565 FAD binding domain CQB05_RS11365 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CQB05_RS11370 PF04461 Protein of unknown function (DUF520) CQB05_RS11385 PF02660 Glycerol-3-phosphate acyltransferase CQB05_RS11390 PF04073 Aminoacyl-tRNA editing domain CQB05_RS11395 PF00248 Aldo/keto reductase family CQB05_RS11400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CQB05_RS11400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CQB05_RS11400 PF06827 Zinc finger found in FPG and IleRS CQB05_RS11415 PF02463 RecF/RecN/SMC N terminal domain CQB05_RS11425 PF01433 Peptidase family M1 domain CQB05_RS11425 PF11940 Domain of unknown function (DUF3458) Ig-like fold CQB05_RS11425 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CQB05_RS11430 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CQB05_RS11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS11440 PF03466 LysR substrate binding domain CQB05_RS11445 PF18158 Adaptive response protein AidB N-terminal domain CQB05_RS11445 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS11445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS11450 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS11455 PF02515 CoA-transferase family III CQB05_RS11460 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQB05_RS11460 PF00588 SpoU rRNA Methylase family CQB05_RS11465 PF01351 Ribonuclease HII CQB05_RS11470 PF02684 Lipid-A-disaccharide synthetase CQB05_RS11475 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CQB05_RS11475 PF00132 Bacterial transferase hexapeptide (six repeats) CQB05_RS11480 PF07977 FabA-like domain CQB05_RS11485 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CQB05_RS11485 PF00132 Bacterial transferase hexapeptide (six repeats) CQB05_RS11495 PF07244 Surface antigen variable number repeat CQB05_RS11495 PF01103 Surface antigen CQB05_RS11500 PF02163 Peptidase family M50 CQB05_RS11500 PF17820 PDZ domain CQB05_RS11505 PF13288 DXP reductoisomerase C-terminal domain CQB05_RS11505 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CQB05_RS11505 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CQB05_RS11515 PF01255 Putative undecaprenyl diphosphate synthase CQB05_RS11520 PF01765 Ribosome recycling factor CQB05_RS11525 PF00696 Amino acid kinase family CQB05_RS11530 PF00889 Elongation factor TS CQB05_RS11535 PF00318 Ribosomal protein S2 CQB05_RS11570 PF13411 MerR HTH family regulatory protein CQB05_RS11575 PF00403 Heavy-metal-associated domain CQB05_RS11600 PF07732 Multicopper oxidase CQB05_RS11600 PF00394 Multicopper oxidase CQB05_RS11600 PF07731 Multicopper oxidase CQB05_RS11615 PF03466 LysR substrate binding domain CQB05_RS11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS11630 PF03576 Peptidase family S58 CQB05_RS11645 PF00005 ABC transporter CQB05_RS11645 PF12848 ABC transporter CQB05_RS11650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CQB05_RS11650 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CQB05_RS11660 PF00270 DEAD/DEAH box helicase CQB05_RS11660 PF00271 Helicase conserved C-terminal domain CQB05_RS11670 PF02254 TrkA-N domain CQB05_RS11670 PF00999 Sodium/hydrogen exchanger family CQB05_RS11750 PF06791 Prophage tail length tape measure protein CQB05_RS11925 PF01381 Helix-turn-helix CQB05_RS11925 PF00717 Peptidase S24-like CQB05_RS11980 PF00145 C-5 cytosine-specific DNA methylase CQB05_RS12120 PF12441 CopG antitoxin of type II toxin-antitoxin system CQB05_RS12135 PF03869 Arc-like DNA binding domain CQB05_RS12235 PF10668 Phage terminase small subunit CQB05_RS12235 PF03592 Terminase small subunit CQB05_RS12340 PF00145 C-5 cytosine-specific DNA methylase CQB05_RS12425 PF00216 Bacterial DNA-binding protein CQB05_RS12430 PF01066 CDP-alcohol phosphatidyltransferase CQB05_RS12435 PF01541 GIY-YIG catalytic domain CQB05_RS12435 PF08459 UvrC Helix-hairpin-helix N-terminal CQB05_RS12450 PF03576 Peptidase family S58 CQB05_RS12455 PF12911 N-terminal TM domain of oligopeptide transport permease C CQB05_RS12455 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS12460 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS12465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQB05_RS12470 PF00005 ABC transporter CQB05_RS12470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQB05_RS12475 PF01112 Asparaginase CQB05_RS12485 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS12490 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS12495 PF00682 HMGL-like CQB05_RS12500 PF02515 CoA-transferase family III CQB05_RS12515 PF09285 Elongation factor P, C-terminal CQB05_RS12515 PF08207 Elongation factor P (EF-P) KOW-like domain CQB05_RS12515 PF01132 Elongation factor P (EF-P) OB domain CQB05_RS12525 PF07690 Major Facilitator Superfamily CQB05_RS12530 PF04055 Radical SAM superfamily CQB05_RS12530 PF00919 Uncharacterized protein family UPF0004 CQB05_RS12530 PF18693 TRAM domain CQB05_RS12625 PF06791 Prophage tail length tape measure protein CQB05_RS12740 PF00717 Peptidase S24-like CQB05_RS12740 PF01381 Helix-turn-helix CQB05_RS12775 PF17762 HTH domain found in ParB protein CQB05_RS12775 PF02195 ParB-like nuclease domain CQB05_RS12795 PF07879 PHB/PHA accumulation regulator DNA-binding domain CQB05_RS12795 PF05233 PHB accumulation regulatory domain CQB05_RS12805 PF01965 DJ-1/PfpI family CQB05_RS12840 PF04607 Region found in RelA / SpoT proteins CQB05_RS12840 PF02824 TGS domain CQB05_RS12840 PF13291 ACT domain CQB05_RS12850 PF00106 short chain dehydrogenase CQB05_RS12860 PF00072 Response regulator receiver domain CQB05_RS12860 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS12865 PF00672 HAMP domain CQB05_RS12865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS12865 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS12870 PF02542 YgbB family CQB05_RS12870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CQB05_RS12875 PF02542 YgbB family CQB05_RS12875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CQB05_RS12880 PF02559 CarD-like/TRCF domain CQB05_RS12880 PF17757 UvrB interaction domain CQB05_RS12880 PF03461 TRCF domain CQB05_RS12880 PF00271 Helicase conserved C-terminal domain CQB05_RS12880 PF00270 DEAD/DEAH box helicase CQB05_RS12890 PF07519 Tannase and feruloyl esterase CQB05_RS12905 PF03180 NLPA lipoprotein CQB05_RS12910 PF01810 LysE type translocator CQB05_RS12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS12915 PF03466 LysR substrate binding domain CQB05_RS12920 PF02082 Transcriptional regulator CQB05_RS12925 PF01814 Hemerythrin HHE cation binding domain CQB05_RS12925 PF04405 Domain of Unknown function (DUF542) CQB05_RS12945 PF00270 DEAD/DEAH box helicase CQB05_RS12945 PF00271 Helicase conserved C-terminal domain CQB05_RS12955 PF00248 Aldo/keto reductase family CQB05_RS12960 PF04102 SlyX CQB05_RS12965 PF00155 Aminotransferase class I and II CQB05_RS12970 PF10576 Iron-sulfur binding domain of endonuclease III CQB05_RS12970 PF00633 Helix-hairpin-helix motif CQB05_RS12970 PF00730 HhH-GPD superfamily base excision DNA repair protein CQB05_RS12975 PF00583 Acetyltransferase (GNAT) family CQB05_RS12985 PF00083 Sugar (and other) transporter CQB05_RS12990 PF05598 Transposase domain (DUF772) CQB05_RS12990 PF01609 Transposase DDE domain CQB05_RS13015 PF02277 Phosphoribosyltransferase CQB05_RS13020 PF07685 CobB/CobQ-like glutamine amidotransferase domain CQB05_RS13020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQB05_RS13040 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA CQB05_RS13055 PF03186 CobD/Cbib protein CQB05_RS13060 PF00881 Nitroreductase family CQB05_RS13065 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CQB05_RS13065 PF12557 Cob(I)alamin adenosyltransferase N terminal CQB05_RS13070 PF00005 ABC transporter CQB05_RS13075 PF01032 FecCD transport family CQB05_RS13085 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CQB05_RS13090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQB05_RS13090 PF07685 CobB/CobQ-like glutamine amidotransferase domain CQB05_RS13095 PF00593 TonB dependent receptor CQB05_RS13095 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS13110 PF00563 EAL domain CQB05_RS13110 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS13110 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS13115 PF00072 Response regulator receiver domain CQB05_RS13125 PF04055 Radical SAM superfamily CQB05_RS13125 PF06969 HemN C-terminal domain CQB05_RS13130 PF13545 Crp-like helix-turn-helix domain CQB05_RS13130 PF00027 Cyclic nucleotide-binding domain CQB05_RS13145 PF13746 4Fe-4S dicluster domain CQB05_RS13145 PF12801 4Fe-4S binding domain CQB05_RS13145 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CQB05_RS13150 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CQB05_RS13150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQB05_RS13165 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQB05_RS13175 PF00403 Heavy-metal-associated domain CQB05_RS13185 PF00582 Universal stress protein family CQB05_RS13195 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS13200 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS13200 PF00501 AMP-binding enzyme CQB05_RS13205 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS13210 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS13225 PF07729 FCD domain CQB05_RS13225 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS13230 PF01790 Prolipoprotein diacylglyceryl transferase CQB05_RS13235 PF02661 Fic/DOC family CQB05_RS13240 PF00210 Ferritin-like domain CQB05_RS13245 PF00920 Dehydratase family CQB05_RS13255 PF00034 Cytochrome c CQB05_RS13275 PF00501 AMP-binding enzyme CQB05_RS13275 PF16177 Acetyl-coenzyme A synthetase N-terminus CQB05_RS13275 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS13280 PF03350 Uncharacterized protein family, UPF0114 CQB05_RS13285 PF00571 CBS domain CQB05_RS13285 PF00005 ABC transporter CQB05_RS13290 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS13295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CQB05_RS13300 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS13300 PF00672 HAMP domain CQB05_RS13305 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS13305 PF00072 Response regulator receiver domain CQB05_RS13315 PF10415 Fumarase C C-terminus CQB05_RS13315 PF00206 Lyase CQB05_RS13320 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS13320 PF00563 EAL domain CQB05_RS13320 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS13330 PF01177 Asp/Glu/Hydantoin racemase CQB05_RS13340 PF03450 CO dehydrogenase flavoprotein C-terminal domain CQB05_RS13340 PF00941 FAD binding domain in molybdopterin dehydrogenase CQB05_RS13345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CQB05_RS13345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CQB05_RS13350 PF01863 Protein of unknown function DUF45 CQB05_RS13365 PF10431 C-terminal, D2-small domain, of ClpB protein CQB05_RS13365 PF17871 AAA lid domain CQB05_RS13365 PF07724 AAA domain (Cdc48 subfamily) CQB05_RS13365 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS13375 PF05947 Type VI secretion system, TssF CQB05_RS13380 PF04965 Gene 25-like lysozyme CQB05_RS13385 PF07024 ImpE protein CQB05_RS13390 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CQB05_RS13395 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CQB05_RS13410 PF06744 Type VI secretion protein IcmF C-terminal CQB05_RS13410 PF06761 Intracellular multiplication and human macrophage-killing CQB05_RS13410 PF14331 ImcF-related N-terminal domain CQB05_RS13415 PF00691 OmpA family CQB05_RS13415 PF13488 Glycine zipper CQB05_RS13420 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CQB05_RS13445 PF03793 PASTA domain CQB05_RS13445 PF00069 Protein kinase domain CQB05_RS13465 PF13533 Biotin-lipoyl like CQB05_RS13470 PF00873 AcrB/AcrD/AcrF family CQB05_RS13480 PF05698 Bacterial trigger factor protein (TF) C-terminus CQB05_RS13480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQB05_RS13480 PF05697 Bacterial trigger factor protein (TF) CQB05_RS13485 PF00574 Clp protease CQB05_RS13490 PF10431 C-terminal, D2-small domain, of ClpB protein CQB05_RS13490 PF06689 ClpX C4-type zinc finger CQB05_RS13490 PF07724 AAA domain (Cdc48 subfamily) CQB05_RS13495 PF05362 Lon protease (S16) C-terminal proteolytic domain CQB05_RS13495 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS13495 PF02190 ATP-dependent protease La (LON) substrate-binding domain CQB05_RS13520 PF01593 Flavin containing amine oxidoreductase CQB05_RS13535 PF02913 FAD linked oxidases, C-terminal domain CQB05_RS13535 PF01565 FAD binding domain CQB05_RS13545 PF00303 Thymidylate synthase CQB05_RS13555 PF00186 Dihydrofolate reductase CQB05_RS13560 PF03372 Endonuclease/Exonuclease/phosphatase family CQB05_RS13570 PF00158 Sigma-54 interaction domain CQB05_RS13570 PF00072 Response regulator receiver domain CQB05_RS13570 PF02954 Bacterial regulatory protein, Fis family CQB05_RS13585 PF03951 Glutamine synthetase, beta-Grasp domain CQB05_RS13585 PF00120 Glutamine synthetase, catalytic domain CQB05_RS13615 PF00849 RNA pseudouridylate synthase CQB05_RS13615 PF01479 S4 domain CQB05_RS13645 PF00156 Phosphoribosyl transferase domain CQB05_RS13650 PF00709 Adenylosuccinate synthetase CQB05_RS13655 PF13393 Histidyl-tRNA synthetase CQB05_RS13660 PF01145 SPFH domain / Band 7 family CQB05_RS13665 PF12221 Bacterial membrane protein N terminal CQB05_RS13665 PF01145 SPFH domain / Band 7 family CQB05_RS13670 PF13167 GTP-binding GTPase N-terminal CQB05_RS13670 PF01926 50S ribosome-binding GTPase CQB05_RS13670 PF16360 GTP-binding GTPase Middle Region CQB05_RS13675 PF17209 Hfq protein CQB05_RS13680 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CQB05_RS13680 PF01926 50S ribosome-binding GTPase CQB05_RS13685 PF13360 PQQ-like domain CQB05_RS13695 PF03129 Anticodon binding domain CQB05_RS13695 PF13393 Histidyl-tRNA synthetase CQB05_RS13700 PF04551 GcpE protein CQB05_RS13715 PF04055 Radical SAM superfamily CQB05_RS13720 PF00334 Nucleoside diphosphate kinase CQB05_RS13725 PF00849 RNA pseudouridylate synthase CQB05_RS13725 PF01479 S4 domain CQB05_RS13730 PF04079 Segregation and condensation complex subunit ScpB CQB05_RS13740 PF01476 LysM domain CQB05_RS13740 PF01551 Peptidase family M23 CQB05_RS13750 PF01975 Survival protein SurE CQB05_RS13755 PF14765 Polyketide synthase dehydratase CQB05_RS13755 PF00107 Zinc-binding dehydrogenase CQB05_RS13755 PF00550 Phosphopantetheine attachment site CQB05_RS13755 PF08659 KR domain CQB05_RS13755 PF16197 Ketoacyl-synthetase C-terminal extension CQB05_RS13755 PF00109 Beta-ketoacyl synthase, N-terminal domain CQB05_RS13755 PF00698 Acyl transferase domain CQB05_RS13755 PF02801 Beta-ketoacyl synthase, C-terminal domain CQB05_RS13755 PF08240 Alcohol dehydrogenase GroES-like domain CQB05_RS13760 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS13765 PF09423 PhoD-like phosphatase CQB05_RS13765 PF16655 PhoD-like phosphatase, N-terminal domain CQB05_RS13775 PF03480 Bacterial extracellular solute-binding protein, family 7 CQB05_RS13780 PF00563 EAL domain CQB05_RS13780 PF13188 PAS domain CQB05_RS13780 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS13780 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS13785 PF08278 DNA primase DnaG DnaB-binding CQB05_RS13785 PF13662 Toprim domain CQB05_RS13785 PF01807 CHC2 zinc finger CQB05_RS13785 PF08275 DNA primase catalytic core, N-terminal domain CQB05_RS13785 PF10410 DnaB-helicase binding domain of primase CQB05_RS13790 PF04545 Sigma-70, region 4 CQB05_RS13790 PF04546 Sigma-70, non-essential region CQB05_RS13790 PF00140 Sigma-70 factor, region 1.2 CQB05_RS13790 PF03979 Sigma-70 factor, region 1.1 CQB05_RS13790 PF04542 Sigma-70 region 2 CQB05_RS13790 PF04539 Sigma-70 region 3 CQB05_RS13795 PF02203 Tar ligand binding domain homologue CQB05_RS13795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS13795 PF00672 HAMP domain CQB05_RS13835 PF13378 Enolase C-terminal domain-like CQB05_RS13845 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS13855 PF00701 Dihydrodipicolinate synthetase family CQB05_RS13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS13860 PF03466 LysR substrate binding domain CQB05_RS13865 PF06903 VirK protein CQB05_RS13870 PF00892 EamA-like transporter family CQB05_RS13875 PF02515 CoA-transferase family III CQB05_RS13885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQB05_RS13910 PF00391 PEP-utilising enzyme, mobile domain CQB05_RS13910 PF02896 PEP-utilising enzyme, TIM barrel domain CQB05_RS13910 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CQB05_RS13915 PF03618 Kinase/pyrophosphorylase CQB05_RS13935 PF04185 Phosphoesterase family CQB05_RS13935 PF05506 Domain of unknown function (DUF756) CQB05_RS13940 PF13192 Thioredoxin domain CQB05_RS13940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS13945 PF10417 C-terminal domain of 1-Cys peroxiredoxin CQB05_RS13945 PF00578 AhpC/TSA family CQB05_RS13950 PF00210 Ferritin-like domain CQB05_RS13985 PF00593 TonB dependent receptor CQB05_RS13985 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS13995 PF00171 Aldehyde dehydrogenase family CQB05_RS14000 PF02321 Outer membrane efflux protein CQB05_RS14005 PF00873 AcrB/AcrD/AcrF family CQB05_RS14010 PF13533 Biotin-lipoyl like CQB05_RS14015 PF07859 alpha/beta hydrolase fold CQB05_RS14020 PF03466 LysR substrate binding domain CQB05_RS14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS14025 PF09905 DNA-binding protein VF530 CQB05_RS14035 PF05221 S-adenosyl-L-homocysteine hydrolase CQB05_RS14035 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CQB05_RS14055 PF14403 Circularly permuted ATP-grasp type 2 CQB05_RS14060 PF03772 Competence protein CQB05_RS14060 PF00753 Metallo-beta-lactamase superfamily CQB05_RS14095 PF08543 Phosphomethylpyrimidine kinase CQB05_RS14100 PF02203 Tar ligand binding domain homologue CQB05_RS14100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS14100 PF00672 HAMP domain CQB05_RS14105 PF00672 HAMP domain CQB05_RS14105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS14105 PF02203 Tar ligand binding domain homologue CQB05_RS14110 PF00521 DNA gyrase/topoisomerase IV, subunit A CQB05_RS14115 PF01464 Transglycosylase SLT domain CQB05_RS14120 PF01751 Toprim domain CQB05_RS14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS14120 PF00986 DNA gyrase B subunit, carboxyl terminus CQB05_RS14120 PF00204 DNA gyrase B CQB05_RS14135 PF00701 Dihydrodipicolinate synthetase family CQB05_RS14140 PF06804 NlpB/DapX lipoprotein CQB05_RS14145 PF00753 Metallo-beta-lactamase superfamily CQB05_RS14160 PF08007 Cupin superfamily protein CQB05_RS14165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQB05_RS14175 PF00692 dUTPase CQB05_RS14180 PF02441 Flavoprotein CQB05_RS14180 PF04127 DNA / pantothenate metabolism flavoprotein CQB05_RS14185 PF00117 Glutamine amidotransferase class-I CQB05_RS14185 PF06418 CTP synthase N-terminus CQB05_RS14190 PF00793 DAHP synthetase I family CQB05_RS14210 PF00113 Enolase, C-terminal TIM barrel domain CQB05_RS14210 PF03952 Enolase, N-terminal domain CQB05_RS14215 PF04977 Septum formation initiator CQB05_RS14225 PF01430 Hsp33 protein CQB05_RS14230 PF00132 Bacterial transferase hexapeptide (six repeats) CQB05_RS14235 PF04305 Protein of unknown function (DUF455) CQB05_RS14240 PF08668 HDOD domain CQB05_RS14240 PF00563 EAL domain CQB05_RS14245 PF08668 HDOD domain CQB05_RS14245 PF00563 EAL domain CQB05_RS14250 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS14255 PF02899 Phage integrase, N-terminal SAM-like domain CQB05_RS14255 PF00589 Phage integrase family CQB05_RS14260 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS14270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQB05_RS14270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQB05_RS14275 PF03466 LysR substrate binding domain CQB05_RS14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS14285 PF08331 Domain of unknown function (DUF1730) CQB05_RS14290 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CQB05_RS14295 PF11741 AMIN domain CQB05_RS14295 PF01520 N-acetylmuramoyl-L-alanine amidase CQB05_RS14310 PF00561 alpha/beta hydrolase fold CQB05_RS14315 PF09335 SNARE associated Golgi protein CQB05_RS14330 PF03009 Glycerophosphoryl diester phosphodiesterase family CQB05_RS14335 PF12146 Serine aminopeptidase, S33 CQB05_RS14340 PF01638 HxlR-like helix-turn-helix CQB05_RS14345 PF05368 NmrA-like family CQB05_RS14355 PF00005 ABC transporter CQB05_RS14360 PF00011 Hsp20/alpha crystallin family CQB05_RS14380 PF00535 Glycosyl transferase family 2 CQB05_RS14380 PF13181 Tetratricopeptide repeat CQB05_RS14400 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS14415 PF00005 ABC transporter CQB05_RS14425 PF00664 ABC transporter transmembrane region CQB05_RS14425 PF00005 ABC transporter CQB05_RS14445 PF00361 Proton-conducting membrane transporter CQB05_RS14445 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CQB05_RS14450 PF00361 Proton-conducting membrane transporter CQB05_RS14450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQB05_RS14455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CQB05_RS14460 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CQB05_RS14465 PF12838 4Fe-4S dicluster domain CQB05_RS14470 PF00146 NADH dehydrogenase CQB05_RS14475 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CQB05_RS14475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CQB05_RS14475 PF00384 Molybdopterin oxidoreductase CQB05_RS14480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CQB05_RS14480 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CQB05_RS14480 PF10531 SLBB domain CQB05_RS14490 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CQB05_RS14495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CQB05_RS14500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CQB05_RS14505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CQB05_RS14515 PF03840 Preprotein translocase SecG subunit CQB05_RS14520 PF00121 Triosephosphate isomerase CQB05_RS14525 PF00550 Phosphopantetheine attachment site CQB05_RS14525 PF14765 Polyketide synthase dehydratase CQB05_RS14525 PF16197 Ketoacyl-synthetase C-terminal extension CQB05_RS14525 PF00698 Acyl transferase domain CQB05_RS14525 PF08240 Alcohol dehydrogenase GroES-like domain CQB05_RS14525 PF08659 KR domain CQB05_RS14525 PF02801 Beta-ketoacyl synthase, C-terminal domain CQB05_RS14525 PF00109 Beta-ketoacyl synthase, N-terminal domain CQB05_RS14530 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CQB05_RS14530 PF00013 KH domain CQB05_RS14530 PF00575 S1 RNA binding domain CQB05_RS14530 PF03725 3' exoribonuclease family, domain 2 CQB05_RS14530 PF01138 3' exoribonuclease family, domain 1 CQB05_RS14535 PF00312 Ribosomal protein S15 CQB05_RS14540 PF00155 Aminotransferase class I and II CQB05_RS14555 PF01207 Dihydrouridine synthase (Dus) CQB05_RS14565 PF05175 Methyltransferase small domain CQB05_RS14575 PF00171 Aldehyde dehydrogenase family CQB05_RS14585 PF10431 C-terminal, D2-small domain, of ClpB protein CQB05_RS14585 PF02861 Clp amino terminal domain, pathogenicity island component CQB05_RS14585 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS14585 PF07724 AAA domain (Cdc48 subfamily) CQB05_RS14585 PF17871 AAA lid domain CQB05_RS14590 PF02391 MoaE protein CQB05_RS14615 PF00701 Dihydrodipicolinate synthetase family CQB05_RS14620 PF02597 ThiS family CQB05_RS14625 PF03453 MoeA N-terminal region (domain I and II) CQB05_RS14625 PF03454 MoeA C-terminal region (domain IV) CQB05_RS14625 PF00994 Probable molybdopterin binding domain CQB05_RS14630 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CQB05_RS14635 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS14635 PF14821 Threonine synthase N terminus CQB05_RS14640 PF03447 Homoserine dehydrogenase, NAD binding domain CQB05_RS14640 PF00742 Homoserine dehydrogenase CQB05_RS14640 PF01842 ACT domain CQB05_RS14645 PF00155 Aminotransferase class I and II CQB05_RS14655 PF00578 AhpC/TSA family CQB05_RS14660 PF02562 PhoH-like protein CQB05_RS14660 PF13638 PIN domain CQB05_RS14670 PF00772 DnaB-like helicase N terminal domain CQB05_RS14670 PF03796 DnaB-like helicase C terminal domain CQB05_RS14675 PF01281 Ribosomal protein L9, N-terminal domain CQB05_RS14675 PF03948 Ribosomal protein L9, C-terminal domain CQB05_RS14680 PF01084 Ribosomal protein S18 CQB05_RS14690 PF01250 Ribosomal protein S6 CQB05_RS14700 PF00012 Hsp70 protein CQB05_RS14705 PF00226 DnaJ domain CQB05_RS14705 PF00684 DnaJ central domain CQB05_RS14705 PF01556 DnaJ C terminal domain CQB05_RS14715 PF00330 Aconitase family (aconitate hydratase) CQB05_RS14725 PF00694 Aconitase C-terminal domain CQB05_RS14730 PF00180 Isocitrate/isopropylmalate dehydrogenase CQB05_RS14740 PF02774 Semialdehyde dehydrogenase, dimerisation domain CQB05_RS14740 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQB05_RS14750 PF01416 tRNA pseudouridine synthase CQB05_RS14755 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CQB05_RS14760 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS14765 PF00290 Tryptophan synthase alpha chain CQB05_RS14770 PF01039 Carboxyl transferase domain CQB05_RS14770 PF17848 Acetyl-coA carboxylase zinc finger domain CQB05_RS14775 PF02325 YGGT family CQB05_RS14790 PF02397 Bacterial sugar transferase CQB05_RS14815 PF00152 tRNA synthetases class II (D, K and N) CQB05_RS14815 PF01336 OB-fold nucleic acid binding domain CQB05_RS14830 PF11737 Protein of unknown function (DUF3300) CQB05_RS14845 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CQB05_RS14850 PF02565 Recombination protein O C terminal CQB05_RS14850 PF11967 Recombination protein O N terminal CQB05_RS14855 PF07650 KH domain CQB05_RS14855 PF01926 50S ribosome-binding GTPase CQB05_RS14860 PF00035 Double-stranded RNA binding motif CQB05_RS14860 PF14622 Ribonuclease-III-like CQB05_RS14870 PF10502 Signal peptidase, peptidase S26 CQB05_RS14880 PF13180 PDZ domain CQB05_RS14895 PF08281 Sigma-70, region 4 CQB05_RS14895 PF04542 Sigma-70 region 2 CQB05_RS14905 PF00109 Beta-ketoacyl synthase, N-terminal domain CQB05_RS14905 PF02801 Beta-ketoacyl synthase, C-terminal domain CQB05_RS14910 PF00550 Phosphopantetheine attachment site CQB05_RS14920 PF00698 Acyl transferase domain CQB05_RS14925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CQB05_RS14925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CQB05_RS14930 PF02504 Fatty acid synthesis protein CQB05_RS14935 PF01783 Ribosomal L32p protein family CQB05_RS14940 PF02620 Large ribosomal RNA subunit accumulation protein YceD CQB05_RS14945 PF02545 Maf-like protein CQB05_RS14950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQB05_RS14955 PF01343 Peptidase family S49 CQB05_RS14955 PF06965 Na+/H+ antiporter 1 CQB05_RS14965 PF13419 Haloacid dehalogenase-like hydrolase CQB05_RS14970 PF00849 RNA pseudouridylate synthase CQB05_RS14970 PF01479 S4 domain CQB05_RS14980 PF10150 Ribonuclease E/G family CQB05_RS14980 PF00575 S1 RNA binding domain CQB05_RS14980 PF12111 Polyribonucleotide phosphorylase C terminal CQB05_RS14985 PF03883 Peroxide stress protein YaaA CQB05_RS14995 PF14489 QueF-like protein CQB05_RS14995 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CQB05_RS15000 PF13369 Transglutaminase-like superfamily CQB05_RS15005 PF03023 Lipid II flippase MurJ CQB05_RS15010 PF01649 Ribosomal protein S20 CQB05_RS15015 PF06039 Malate:quinone oxidoreductase (Mqo) CQB05_RS15025 PF00202 Aminotransferase class-III CQB05_RS15030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQB05_RS15030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQB05_RS15045 PF07670 Nucleoside recognition CQB05_RS15045 PF02421 Ferrous iron transport protein B CQB05_RS15045 PF07664 Ferrous iron transport protein B C terminus CQB05_RS15055 PF03692 Putative zinc- or iron-chelating domain CQB05_RS15060 PF01037 Lrp/AsnC ligand binding domain CQB05_RS15065 PF04199 Putative cyclase CQB05_RS15070 PF00266 Aminotransferase class-V CQB05_RS15075 PF03301 Tryptophan 2,3-dioxygenase CQB05_RS15080 PF01494 FAD binding domain CQB05_RS15085 PF00563 EAL domain CQB05_RS15085 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS15085 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS15090 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS15090 PF00563 EAL domain CQB05_RS15090 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS15100 PF00816 H-NS histone family CQB05_RS15105 PF00149 Calcineurin-like phosphoesterase CQB05_RS15110 PF00270 DEAD/DEAH box helicase CQB05_RS15110 PF00271 Helicase conserved C-terminal domain CQB05_RS15115 PF04228 Putative neutral zinc metallopeptidase CQB05_RS15140 PF02608 ABC transporter substrate-binding protein PnrA-like CQB05_RS15145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQB05_RS15145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQB05_RS15160 PF00962 Adenosine/AMP deaminase CQB05_RS15170 PF00355 Rieske [2Fe-2S] domain CQB05_RS15175 PF02608 ABC transporter substrate-binding protein PnrA-like CQB05_RS15185 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS15190 PF00005 ABC transporter CQB05_RS15200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CQB05_RS15200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CQB05_RS15200 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS15200 PF01799 [2Fe-2S] binding domain CQB05_RS15220 PF08447 PAS fold CQB05_RS15220 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS15220 PF05231 MASE1 CQB05_RS15220 PF08448 PAS fold CQB05_RS15220 PF13426 PAS domain CQB05_RS15220 PF00563 EAL domain CQB05_RS15230 PF13609 Gram-negative porin CQB05_RS15240 PF01042 Endoribonuclease L-PSP CQB05_RS15245 PF17200 Single Cache domain 2 CQB05_RS15245 PF07730 Histidine kinase CQB05_RS15250 PF00072 Response regulator receiver domain CQB05_RS15250 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS15255 PF00563 EAL domain CQB05_RS15255 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS15255 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS15275 PF00576 HIUase/Transthyretin family CQB05_RS15290 PF13660 Domain of unknown function (DUF4147) CQB05_RS15290 PF05161 MOFRL family CQB05_RS15295 PF07729 FCD domain CQB05_RS15295 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS15305 PF01546 Peptidase family M20/M25/M40 CQB05_RS15305 PF07687 Peptidase dimerisation domain CQB05_RS15310 PF07687 Peptidase dimerisation domain CQB05_RS15310 PF01546 Peptidase family M20/M25/M40 CQB05_RS15350 PF00375 Sodium:dicarboxylate symporter family CQB05_RS15355 PF00672 HAMP domain CQB05_RS15355 PF02203 Tar ligand binding domain homologue CQB05_RS15355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS15360 PF07729 FCD domain CQB05_RS15360 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS15365 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CQB05_RS15370 PF01177 Asp/Glu/Hydantoin racemase CQB05_RS15385 PF00390 Malic enzyme, N-terminal domain CQB05_RS15385 PF01515 Phosphate acetyl/butaryl transferase CQB05_RS15385 PF03949 Malic enzyme, NAD binding domain CQB05_RS15400 PF00005 ABC transporter CQB05_RS15405 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS15430 PF01176 Translation initiation factor 1A / IF-1 CQB05_RS15450 PF01774 UreD urease accessory protein CQB05_RS15455 PF00672 HAMP domain CQB05_RS15455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS15455 PF02743 Cache domain CQB05_RS15460 PF00106 short chain dehydrogenase CQB05_RS15470 PF13192 Thioredoxin domain CQB05_RS15470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS15490 PF01970 Tripartite tricarboxylate transporter TctA family CQB05_RS15495 PF07331 Tripartite tricarboxylate transporter TctB family CQB05_RS15500 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQB05_RS15500 PF00437 Type II/IV secretion system protein CQB05_RS15515 PF01026 TatD related DNase CQB05_RS15520 PF00595 PDZ domain CQB05_RS15525 PF07726 ATPase family associated with various cellular activities (AAA) CQB05_RS15525 PF17863 AAA lid domain CQB05_RS15530 PF01882 Protein of unknown function DUF58 CQB05_RS15535 PF13519 von Willebrand factor type A domain CQB05_RS15545 PF01784 NIF3 (NGG1p interacting factor 3) CQB05_RS15550 PF08946 Osmosensory transporter coiled coil CQB05_RS15550 PF00083 Sugar (and other) transporter CQB05_RS15555 PF13180 PDZ domain CQB05_RS15555 PF17820 PDZ domain CQB05_RS15565 PF00902 Sec-independent protein translocase protein (TatC) CQB05_RS15570 PF02416 mttA/Hcf106 family CQB05_RS15575 PF02416 mttA/Hcf106 family CQB05_RS15580 PF01230 HIT domain CQB05_RS15595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CQB05_RS15600 PF01502 Phosphoribosyl-AMP cyclohydrolase CQB05_RS15605 PF00977 Histidine biosynthesis protein CQB05_RS15615 PF00375 Sodium:dicarboxylate symporter family CQB05_RS15620 PF16363 GDP-mannose 4,6 dehydratase CQB05_RS15650 PF17103 Stealth protein CR4, conserved region 4 CQB05_RS15650 PF17101 Stealth protein CR1, conserved region 1 CQB05_RS15650 PF11380 Stealth protein CR2, conserved region 2 CQB05_RS15650 PF00534 Glycosyl transferases group 1 CQB05_RS15650 PF17102 Stealth protein CR3, conserved region 3 CQB05_RS15670 PF00977 Histidine biosynthesis protein CQB05_RS15675 PF00117 Glutamine amidotransferase class-I CQB05_RS15680 PF00475 Imidazoleglycerol-phosphate dehydratase CQB05_RS15685 PF00155 Aminotransferase class I and II CQB05_RS15715 PF00815 Histidinol dehydrogenase CQB05_RS15720 PF01634 ATP phosphoribosyltransferase CQB05_RS15725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQB05_RS15730 PF01722 BolA-like protein CQB05_RS15735 PF01061 ABC-2 type transporter CQB05_RS15740 PF00005 ABC transporter CQB05_RS15760 PF04333 MlaA lipoprotein CQB05_RS15765 PF02470 MlaD protein CQB05_RS15770 PF02405 Permease MlaE CQB05_RS15775 PF00005 ABC transporter CQB05_RS15780 PF00005 ABC transporter CQB05_RS15785 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS15790 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS15795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS15795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CQB05_RS15800 PF04898 Glutamate synthase central domain CQB05_RS15800 PF00310 Glutamine amidotransferases class-II CQB05_RS15800 PF01645 Conserved region in glutamate synthase CQB05_RS15800 PF01493 GXGXG motif CQB05_RS15820 PF01966 HD domain CQB05_RS15820 PF13286 Phosphohydrolase-associated domain CQB05_RS15825 PF01761 3-dehydroquinate synthase CQB05_RS15830 PF01202 Shikimate kinase CQB05_RS15840 PF11741 AMIN domain CQB05_RS15840 PF00263 Bacterial type II and III secretion system protein CQB05_RS15840 PF07660 Secretin and TonB N terminus short domain CQB05_RS15840 PF03958 Bacterial type II/III secretion system short domain CQB05_RS15860 PF11104 Type IV pilus assembly protein PilM; CQB05_RS15865 PF00905 Penicillin binding protein transpeptidase domain CQB05_RS15865 PF17092 Penicillin-binding protein OB-like domain CQB05_RS15865 PF00912 Transglycosylase CQB05_RS15870 PF01491 Frataxin-like domain CQB05_RS15880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CQB05_RS15880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CQB05_RS15900 PF01794 Ferric reductase like transmembrane component CQB05_RS15905 PF00174 Oxidoreductase molybdopterin binding domain CQB05_RS15910 PF01578 Cytochrome C assembly protein CQB05_RS15920 PF00034 Cytochrome c CQB05_RS15925 PF01926 50S ribosome-binding GTPase CQB05_RS15935 PF03279 Bacterial lipid A biosynthesis acyltransferase CQB05_RS15945 PF02772 S-adenosylmethionine synthetase, central domain CQB05_RS15945 PF02773 S-adenosylmethionine synthetase, C-terminal domain CQB05_RS15945 PF00438 S-adenosylmethionine synthetase, N-terminal domain CQB05_RS15960 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CQB05_RS15960 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CQB05_RS15965 PF00795 Carbon-nitrogen hydrolase CQB05_RS15965 PF02540 NAD synthase CQB05_RS15970 PF01467 Cytidylyltransferase-like CQB05_RS15990 PF07687 Peptidase dimerisation domain CQB05_RS15990 PF01546 Peptidase family M20/M25/M40 CQB05_RS15995 PF01979 Amidohydrolase family CQB05_RS16000 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CQB05_RS16005 PF01180 Dihydroorotate dehydrogenase CQB05_RS16010 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS16010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CQB05_RS16015 PF08362 YcdC-like protein, C-terminal region CQB05_RS16015 PF00440 Bacterial regulatory proteins, tetR family CQB05_RS16025 PF00535 Glycosyl transferase family 2 CQB05_RS16040 PF00733 Asparagine synthase CQB05_RS16040 PF13537 Glutamine amidotransferase domain CQB05_RS16050 PF13537 Glutamine amidotransferase domain CQB05_RS16050 PF00733 Asparagine synthase CQB05_RS16060 PF13439 Glycosyltransferase Family 4 CQB05_RS16060 PF00534 Glycosyl transferases group 1 CQB05_RS16065 PF13649 Methyltransferase domain CQB05_RS16070 PF00005 ABC transporter CQB05_RS16070 PF14524 Wzt C-terminal domain CQB05_RS16075 PF01061 ABC-2 type transporter CQB05_RS16080 PF02350 UDP-N-acetylglucosamine 2-epimerase CQB05_RS16085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CQB05_RS16090 PF00132 Bacterial transferase hexapeptide (six repeats) CQB05_RS16095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CQB05_RS16095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQB05_RS16100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CQB05_RS16100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CQB05_RS16100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CQB05_RS16105 PF00483 Nucleotidyl transferase CQB05_RS16105 PF01050 Mannose-6-phosphate isomerase CQB05_RS16120 PF00166 Chaperonin 10 Kd subunit CQB05_RS16125 PF00118 TCP-1/cpn60 chaperonin family CQB05_RS16130 PF00342 Phosphoglucose isomerase CQB05_RS16135 PF00923 Transaldolase/Fructose-6-phosphate aldolase CQB05_RS16140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CQB05_RS16140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CQB05_RS16145 PF02685 Glucokinase CQB05_RS16145 PF01418 Helix-turn-helix domain, rpiR family CQB05_RS16145 PF01380 SIS domain CQB05_RS16150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS16150 PF02203 Tar ligand binding domain homologue CQB05_RS16150 PF00672 HAMP domain CQB05_RS16155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQB05_RS16155 PF00005 ABC transporter CQB05_RS16160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQB05_RS16160 PF00005 ABC transporter CQB05_RS16165 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS16165 PF12911 N-terminal TM domain of oligopeptide transport permease C CQB05_RS16170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQB05_RS16175 PF01546 Peptidase family M20/M25/M40 CQB05_RS16175 PF07687 Peptidase dimerisation domain CQB05_RS16180 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS16185 PF00267 Gram-negative porin CQB05_RS16190 PF13609 Gram-negative porin CQB05_RS16195 PF03232 Ubiquinone biosynthesis protein COQ7 CQB05_RS16200 PF02566 OsmC-like protein CQB05_RS16210 PF02654 Cobalamin-5-phosphate synthase CQB05_RS16225 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS16225 PF08334 Type II secretion system (T2SS), protein G CQB05_RS16230 PF12019 Type II transport protein GspH CQB05_RS16235 PF02501 Type II secretion system (T2SS), protein I CQB05_RS16235 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS16240 PF11612 Type II secretion system (T2SS), protein J CQB05_RS16240 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS16265 PF00263 Bacterial type II and III secretion system protein CQB05_RS16265 PF03958 Bacterial type II/III secretion system short domain CQB05_RS16270 PF00437 Type II/IV secretion system protein CQB05_RS16275 PF03960 ArsC family CQB05_RS16280 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS16285 PF08402 TOBE domain CQB05_RS16285 PF00005 ABC transporter CQB05_RS16290 PF01553 Acyltransferase CQB05_RS16295 PF01979 Amidohydrolase family CQB05_RS16300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQB05_RS16300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQB05_RS16305 PF00156 Phosphoribosyl transferase domain CQB05_RS16310 PF03652 Holliday junction resolvase CQB05_RS16315 PF02622 Uncharacterized ACR, COG1678 CQB05_RS16320 PF03441 FAD binding domain of DNA photolyase CQB05_RS16320 PF00875 DNA photolyase CQB05_RS16325 PF01627 Hpt domain CQB05_RS16325 PF09078 CheY binding CQB05_RS16325 PF01584 CheW-like domain CQB05_RS16325 PF02895 Signal transducing histidine kinase, homodimeric domain CQB05_RS16325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS16330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS16330 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CQB05_RS16335 PF01584 CheW-like domain CQB05_RS16340 PF00072 Response regulator receiver domain CQB05_RS16345 PF00072 Response regulator receiver domain CQB05_RS16350 PF00301 Rubredoxin CQB05_RS16355 PF03070 TENA/THI-4/PQQC family CQB05_RS16355 PF02581 Thiamine monophosphate synthase CQB05_RS16355 PF08543 Phosphomethylpyrimidine kinase CQB05_RS16360 PF00202 Aminotransferase class-III CQB05_RS16370 PF02142 MGS-like domain CQB05_RS16370 PF01808 AICARFT/IMPCHase bienzyme CQB05_RS16380 PF01207 Dihydrouridine synthase (Dus) CQB05_RS16385 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS16390 PF09335 SNARE associated Golgi protein CQB05_RS16395 PF00892 EamA-like transporter family CQB05_RS16400 PF00005 ABC transporter CQB05_RS16400 PF00571 CBS domain CQB05_RS16415 PF06071 Protein of unknown function (DUF933) CQB05_RS16415 PF01926 50S ribosome-binding GTPase CQB05_RS16420 PF03476 MOSC N-terminal beta barrel domain CQB05_RS16420 PF03473 MOSC domain CQB05_RS16420 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS16425 PF01494 FAD binding domain CQB05_RS16430 PF10411 Disulfide bond isomerase protein N-terminus CQB05_RS16430 PF13098 Thioredoxin-like domain CQB05_RS16440 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS16445 PF00158 Sigma-54 interaction domain CQB05_RS16450 PF03358 NADPH-dependent FMN reductase CQB05_RS16455 PF00296 Luciferase-like monooxygenase CQB05_RS16460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS16460 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS16460 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS16475 PF01938 TRAM domain CQB05_RS16475 PF00919 Uncharacterized protein family UPF0004 CQB05_RS16475 PF04055 Radical SAM superfamily CQB05_RS16480 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS16480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS16490 PF00072 Response regulator receiver domain CQB05_RS16490 PF00158 Sigma-54 interaction domain CQB05_RS16495 PF00535 Glycosyl transferase family 2 CQB05_RS16500 PF00448 SRP54-type protein, GTPase domain CQB05_RS16500 PF02881 SRP54-type protein, helical bundle domain CQB05_RS16500 PF02978 Signal peptide binding domain CQB05_RS16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS16515 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS16520 PF00158 Sigma-54 interaction domain CQB05_RS16520 PF02954 Bacterial regulatory protein, Fis family CQB05_RS16520 PF00072 Response regulator receiver domain CQB05_RS16525 PF01510 N-acetylmuramoyl-L-alanine amidase CQB05_RS16530 PF00317 Ribonucleotide reductase, all-alpha domain CQB05_RS16530 PF02867 Ribonucleotide reductase, barrel domain CQB05_RS16530 PF03477 ATP cone domain CQB05_RS16535 PF00268 Ribonucleotide reductase, small chain CQB05_RS16545 PF00294 pfkB family carbohydrate kinase CQB05_RS16560 PF00289 Biotin carboxylase, N-terminal domain CQB05_RS16560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQB05_RS16560 PF02785 Biotin carboxylase C-terminal domain CQB05_RS16565 PF00364 Biotin-requiring enzyme CQB05_RS16570 PF08534 Redoxin CQB05_RS16580 PF08245 Mur ligase middle domain CQB05_RS16580 PF01225 Mur ligase family, catalytic domain CQB05_RS16580 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS16590 PF00793 DAHP synthetase I family CQB05_RS16600 PF01523 Putative modulator of DNA gyrase CQB05_RS16605 PF01425 Amidase CQB05_RS16615 PF01098 Cell cycle protein CQB05_RS16620 PF05728 Uncharacterised protein family (UPF0227) CQB05_RS16630 PF00773 RNB domain CQB05_RS16640 PF08501 Shikimate dehydrogenase substrate binding domain CQB05_RS16640 PF01488 Shikimate / quinate 5-dehydrogenase CQB05_RS16640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CQB05_RS16645 PF00912 Transglycosylase CQB05_RS16650 PF01614 Bacterial transcriptional regulator CQB05_RS16650 PF09339 IclR helix-turn-helix domain CQB05_RS16655 PF03328 HpcH/HpaI aldolase/citrate lyase family CQB05_RS16665 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS16680 PF02075 Crossover junction endodeoxyribonuclease RuvC CQB05_RS16690 PF00672 HAMP domain CQB05_RS16690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS16690 PF02203 Tar ligand binding domain homologue CQB05_RS16695 PF00672 HAMP domain CQB05_RS16695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS16700 PF01964 Radical SAM ThiC family CQB05_RS16700 PF13667 ThiC-associated domain CQB05_RS16705 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CQB05_RS16710 PF12327 FtsZ family, C-terminal domain CQB05_RS16710 PF00091 Tubulin/FtsZ family, GTPase domain CQB05_RS16715 PF02491 SHS2 domain inserted in FTSA CQB05_RS16720 PF08478 POTRA domain, FtsQ-type CQB05_RS16720 PF03799 Cell division protein FtsQ CQB05_RS16725 PF07478 D-ala D-ala ligase C-terminus CQB05_RS16725 PF01820 D-ala D-ala ligase N-terminus CQB05_RS16730 PF01225 Mur ligase family, catalytic domain CQB05_RS16730 PF08245 Mur ligase middle domain CQB05_RS16730 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS16735 PF04101 Glycosyltransferase family 28 C-terminal domain CQB05_RS16735 PF03033 Glycosyltransferase family 28 N-terminal domain CQB05_RS16740 PF01098 Cell cycle protein CQB05_RS16745 PF08245 Mur ligase middle domain CQB05_RS16745 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS16750 PF00953 Glycosyl transferase family 4 CQB05_RS16750 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CQB05_RS16755 PF08245 Mur ligase middle domain CQB05_RS16755 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS16755 PF01225 Mur ligase family, catalytic domain CQB05_RS16760 PF08245 Mur ligase middle domain CQB05_RS16760 PF02875 Mur ligase family, glutamate ligase domain CQB05_RS16765 PF00905 Penicillin binding protein transpeptidase domain CQB05_RS16765 PF03717 Penicillin-binding Protein dimerisation domain CQB05_RS16770 PF04999 Cell division protein FtsL CQB05_RS16775 PF01795 MraW methylase family CQB05_RS16780 PF02381 MraZ protein, putative antitoxin-like CQB05_RS16785 PF07724 AAA domain (Cdc48 subfamily) CQB05_RS16785 PF00004 ATPase family associated with various cellular activities (AAA) CQB05_RS16790 PF00227 Proteasome subunit CQB05_RS16800 PF01258 Prokaryotic dksA/traR C4-type zinc finger CQB05_RS16810 PF00563 EAL domain CQB05_RS16810 PF05231 MASE1 CQB05_RS16810 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS16810 PF08447 PAS fold CQB05_RS16810 PF08448 PAS fold CQB05_RS16810 PF13426 PAS domain CQB05_RS16815 PF10672 S-adenosylmethionine-dependent methyltransferase CQB05_RS16815 PF17785 PUA-like domain CQB05_RS16825 PF12729 Four helix bundle sensory module for signal transduction CQB05_RS16825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS16825 PF00672 HAMP domain CQB05_RS16830 PF02638 Glycosyl hydrolase-like 10 CQB05_RS16835 PF02899 Phage integrase, N-terminal SAM-like domain CQB05_RS16835 PF00589 Phage integrase family CQB05_RS16845 PF01678 Diaminopimelate epimerase CQB05_RS16850 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS16870 PF01494 FAD binding domain CQB05_RS16880 PF01479 S4 domain CQB05_RS16880 PF00849 RNA pseudouridylate synthase CQB05_RS16885 PF05987 Bacterial protein of unknown function (DUF898) CQB05_RS16900 PF16537 Type II secretion system protein B CQB05_RS16905 PF13401 AAA domain CQB05_RS16905 PF01471 Putative peptidoglycan binding domain CQB05_RS16910 PF00501 AMP-binding enzyme CQB05_RS16915 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQB05_RS16915 PF00005 ABC transporter CQB05_RS16920 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS16925 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS16925 PF11862 Domain of unknown function (DUF3382) CQB05_RS16935 PF00005 ABC transporter CQB05_RS16940 PF14535 AMP-binding enzyme C-terminal domain CQB05_RS16940 PF00501 AMP-binding enzyme CQB05_RS16945 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS16950 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS16965 PF03352 Methyladenine glycosylase CQB05_RS16965 PF00117 Glutamine amidotransferase class-I CQB05_RS16965 PF13673 Acetyltransferase (GNAT) domain CQB05_RS16965 PF13302 Acetyltransferase (GNAT) domain CQB05_RS16965 PF00958 GMP synthase C terminal domain CQB05_RS16980 PF02203 Tar ligand binding domain homologue CQB05_RS16980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS16980 PF00672 HAMP domain CQB05_RS16990 PF07687 Peptidase dimerisation domain CQB05_RS16990 PF01546 Peptidase family M20/M25/M40 CQB05_RS16995 PF07687 Peptidase dimerisation domain CQB05_RS16995 PF01546 Peptidase family M20/M25/M40 CQB05_RS17005 PF00384 Molybdopterin oxidoreductase CQB05_RS17005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CQB05_RS17005 PF01568 Molydopterin dinucleotide binding domain CQB05_RS17030 PF07690 Major Facilitator Superfamily CQB05_RS17040 PF07969 Amidohydrolase family CQB05_RS17045 PF00857 Isochorismatase family CQB05_RS17050 PF02678 Pirin CQB05_RS17050 PF17954 Quercetinase C-terminal cupin domain CQB05_RS17055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17055 PF03466 LysR substrate binding domain CQB05_RS17060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17060 PF03466 LysR substrate binding domain CQB05_RS17065 PF03480 Bacterial extracellular solute-binding protein, family 7 CQB05_RS17070 PF00920 Dehydratase family CQB05_RS17080 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CQB05_RS17085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CQB05_RS17095 PF17158 Membrane-associated sensor, integral membrane domain CQB05_RS17095 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS17105 PF03006 Haemolysin-III related CQB05_RS17110 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS17110 PF00563 EAL domain CQB05_RS17110 PF13185 GAF domain CQB05_RS17120 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS17150 PF07690 Major Facilitator Superfamily CQB05_RS17170 PF03524 Conjugal transfer protein CQB05_RS17180 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CQB05_RS17195 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CQB05_RS17205 PF04956 TrbC/VIRB2 family CQB05_RS17210 PF00437 Type II/IV secretion system protein CQB05_RS17220 PF02534 Type IV secretory system Conjugative DNA transfer CQB05_RS17255 PF00893 Small Multidrug Resistance protein CQB05_RS17260 PF07690 Major Facilitator Superfamily CQB05_RS17265 PF03466 LysR substrate binding domain CQB05_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17270 PF00248 Aldo/keto reductase family CQB05_RS17280 PF02525 Flavodoxin-like fold CQB05_RS17295 PF13007 Transposase C of IS166 homeodomain CQB05_RS17295 PF13817 IS66 C-terminal element CQB05_RS17295 PF03050 Transposase IS66 family CQB05_RS17295 PF13005 zinc-finger binding domain of transposase IS66 CQB05_RS17305 PF03466 LysR substrate binding domain CQB05_RS17305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17315 PF07690 Major Facilitator Superfamily CQB05_RS17320 PF07690 Major Facilitator Superfamily CQB05_RS17325 PF02525 Flavodoxin-like fold CQB05_RS17330 PF03466 LysR substrate binding domain CQB05_RS17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17335 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS17365 PF10502 Signal peptidase, peptidase S26 CQB05_RS17380 PF13614 AAA domain CQB05_RS17415 PF05284 Protein of unknown function (DUF736) CQB05_RS17420 PF17762 HTH domain found in ParB protein CQB05_RS17420 PF02195 ParB-like nuclease domain CQB05_RS17425 PF06067 Domain of unknown function (DUF932) CQB05_RS17440 PF02463 RecF/RecN/SMC N terminal domain CQB05_RS17445 PF13361 UvrD-like helicase C-terminal domain CQB05_RS17445 PF00580 UvrD/REP helicase N-terminal domain CQB05_RS17470 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CQB05_RS17475 PF01814 Hemerythrin HHE cation binding domain CQB05_RS17485 PF00317 Ribonucleotide reductase, all-alpha domain CQB05_RS17485 PF03477 ATP cone domain CQB05_RS17485 PF02867 Ribonucleotide reductase, barrel domain CQB05_RS17490 PF00484 Carbonic anhydrase CQB05_RS17495 PF00639 PPIC-type PPIASE domain CQB05_RS17495 PF09312 SurA N-terminal domain CQB05_RS17500 PF02665 Nitrate reductase gamma subunit CQB05_RS17505 PF02613 Nitrate reductase delta subunit CQB05_RS17510 PF13247 4Fe-4S dicluster domain CQB05_RS17510 PF14711 Respiratory nitrate reductase beta C-terminal CQB05_RS17515 PF01568 Molydopterin dinucleotide binding domain CQB05_RS17515 PF00384 Molybdopterin oxidoreductase CQB05_RS17515 PF14710 Respiratory nitrate reductase alpha N-terminal CQB05_RS17525 PF07690 Major Facilitator Superfamily CQB05_RS17535 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS17535 PF00593 TonB dependent receptor CQB05_RS17550 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS17550 PF00072 Response regulator receiver domain CQB05_RS17565 PF02308 MgtC family CQB05_RS17575 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS17575 PF00563 EAL domain CQB05_RS17575 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS17580 PF00551 Formyl transferase CQB05_RS17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17585 PF03466 LysR substrate binding domain CQB05_RS17595 PF02913 FAD linked oxidases, C-terminal domain CQB05_RS17595 PF01565 FAD binding domain CQB05_RS17615 PF04286 Protein of unknown function (DUF445) CQB05_RS17625 PF01212 Beta-eliminating lyase CQB05_RS17630 PF01168 Alanine racemase, N-terminal domain CQB05_RS17635 PF00437 Type II/IV secretion system protein CQB05_RS17640 PF00027 Cyclic nucleotide-binding domain CQB05_RS17640 PF13545 Crp-like helix-turn-helix domain CQB05_RS17645 PF00437 Type II/IV secretion system protein CQB05_RS17655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQB05_RS17655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQB05_RS17660 PF04972 BON domain CQB05_RS17665 PF13580 SIS domain CQB05_RS17670 PF02021 Uncharacterised protein family UPF0102 CQB05_RS17675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQB05_RS17680 PF00012 Hsp70 protein CQB05_RS17690 PF01196 Ribosomal protein L17 CQB05_RS17695 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CQB05_RS17695 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CQB05_RS17695 PF01000 RNA polymerase Rpb3/RpoA insert domain CQB05_RS17700 PF01479 S4 domain CQB05_RS17700 PF00163 Ribosomal protein S4/S9 N-terminal domain CQB05_RS17705 PF00411 Ribosomal protein S11 CQB05_RS17710 PF00416 Ribosomal protein S13/S18 CQB05_RS17715 PF00444 Ribosomal protein L36 CQB05_RS17720 PF00344 SecY translocase CQB05_RS17725 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CQB05_RS17730 PF00327 Ribosomal protein L30p/L7e CQB05_RS17735 PF03719 Ribosomal protein S5, C-terminal domain CQB05_RS17735 PF00333 Ribosomal protein S5, N-terminal domain CQB05_RS17740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CQB05_RS17745 PF00347 Ribosomal protein L6 CQB05_RS17750 PF00410 Ribosomal protein S8 CQB05_RS17755 PF00253 Ribosomal protein S14p/S29e CQB05_RS17760 PF00673 ribosomal L5P family C-terminus CQB05_RS17760 PF00281 Ribosomal protein L5 CQB05_RS17765 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CQB05_RS17770 PF00238 Ribosomal protein L14p/L23e CQB05_RS17775 PF01266 FAD dependent oxidoreductase CQB05_RS17775 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CQB05_RS17790 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS17795 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS17800 PF00005 ABC transporter CQB05_RS17800 PF08402 TOBE domain CQB05_RS17805 PF17912 MalK OB fold domain CQB05_RS17805 PF00005 ABC transporter CQB05_RS17810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQB05_RS17810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQB05_RS17815 PF03807 NADP oxidoreductase coenzyme F420-dependent CQB05_RS17815 PF14748 Pyrroline-5-carboxylate reductase dimerisation CQB05_RS17825 PF00535 Glycosyl transferase family 2 CQB05_RS17840 PF01040 UbiA prenyltransferase family CQB05_RS17845 PF00210 Ferritin-like domain CQB05_RS17850 PF03466 LysR substrate binding domain CQB05_RS17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17855 PF00270 DEAD/DEAH box helicase CQB05_RS17855 PF00271 Helicase conserved C-terminal domain CQB05_RS17855 PF17191 RecG wedge domain CQB05_RS17860 PF01966 HD domain CQB05_RS17860 PF11871 Domain of unknown function (DUF3391) CQB05_RS17875 PF02547 Queuosine biosynthesis protein CQB05_RS17890 PF03167 Uracil DNA glycosylase superfamily CQB05_RS17895 PF00218 Indole-3-glycerol phosphate synthase CQB05_RS17900 PF02885 Glycosyl transferase family, helical bundle domain CQB05_RS17900 PF00591 Glycosyl transferase family, a/b domain CQB05_RS17905 PF01810 LysE type translocator CQB05_RS17910 PF00117 Glutamine amidotransferase class-I CQB05_RS17930 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CQB05_RS17935 PF04851 Type III restriction enzyme, res subunit CQB05_RS17935 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CQB05_RS17935 PF08463 EcoEI R protein C-terminal CQB05_RS17935 PF00271 Helicase conserved C-terminal domain CQB05_RS17945 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS17950 PF01042 Endoribonuclease L-PSP CQB05_RS17965 PF01266 FAD dependent oxidoreductase CQB05_RS17975 PF03466 LysR substrate binding domain CQB05_RS17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS17980 PF00892 EamA-like transporter family CQB05_RS17985 PF02558 Ketopantoate reductase PanE/ApbA CQB05_RS17985 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain CQB05_RS18000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQB05_RS18035 PF01555 DNA methylase CQB05_RS18045 PF01751 Toprim domain CQB05_RS18045 PF01131 DNA topoisomerase CQB05_RS18050 PF00145 C-5 cytosine-specific DNA methylase CQB05_RS18235 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQB05_RS18235 PF02811 PHP domain CQB05_RS18235 PF14579 Helix-hairpin-helix motif CQB05_RS18235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQB05_RS18270 PF00239 Resolvase, N terminal domain CQB05_RS18270 PF02796 Helix-turn-helix domain of resolvase CQB05_RS18340 PF14220 Domain of unknown function (DUF4329) CQB05_RS18340 PF03527 RHS protein CQB05_RS18340 PF05593 RHS Repeat CQB05_RS18350 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS18350 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS18355 PF03466 LysR substrate binding domain CQB05_RS18360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQB05_RS18360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQB05_RS18365 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS18375 PF04002 RadC-like JAB domain CQB05_RS18415 PF00589 Phage integrase family CQB05_RS18415 PF13356 Arm DNA-binding domain CQB05_RS18430 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS18430 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS18455 PF01551 Peptidase family M23 CQB05_RS18455 PF10145 Phage-related minor tail protein CQB05_RS18455 PF01464 Transglycosylase SLT domain CQB05_RS18460 PF13847 Methyltransferase domain CQB05_RS18460 PF10119 Predicted methyltransferase regulatory domain CQB05_RS18465 PF00263 Bacterial type II and III secretion system protein CQB05_RS18465 PF03958 Bacterial type II/III secretion system short domain CQB05_RS18510 PF01514 Secretory protein of YscJ/FliF family CQB05_RS18525 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQB05_RS18525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQB05_RS18525 PF18269 T3SS EscN ATPase C-terminal domain CQB05_RS18575 PF01312 FlhB HrpN YscU SpaS Family CQB05_RS18580 PF00771 FHIPEP family CQB05_RS18595 PF00813 FliP family CQB05_RS18600 PF01313 Bacterial export proteins, family 3 CQB05_RS18620 PF12833 Helix-turn-helix domain CQB05_RS18640 PF13419 Haloacid dehalogenase-like hydrolase CQB05_RS18650 PF00834 Ribulose-phosphate 3 epimerase family CQB05_RS18655 PF04379 ApaG domain CQB05_RS18670 PF04107 Glutamate-cysteine ligase family 2(GCS2) CQB05_RS18690 PF04608 Phosphatidylglycerophosphatase A CQB05_RS18695 PF02464 Competence-damaged protein CQB05_RS18700 PF00672 HAMP domain CQB05_RS18700 PF02203 Tar ligand binding domain homologue CQB05_RS18700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS18705 PF00916 Sulfate permease family CQB05_RS18705 PF01740 STAS domain CQB05_RS18710 PF07517 SecA DEAD-like domain CQB05_RS18710 PF02810 SEC-C motif CQB05_RS18710 PF07516 SecA Wing and Scaffold domain CQB05_RS18710 PF01043 SecA preprotein cross-linking domain CQB05_RS18720 PF06472 ABC transporter transmembrane region 2 CQB05_RS18720 PF00005 ABC transporter CQB05_RS18730 PF01170 Putative RNA methylase family UPF0020 CQB05_RS18730 PF02926 THUMP domain CQB05_RS18735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS18735 PF00672 HAMP domain CQB05_RS18735 PF02743 Cache domain CQB05_RS18740 PF03073 TspO/MBR family CQB05_RS18745 PF04963 Sigma-54 factor, core binding domain CQB05_RS18745 PF00309 Sigma-54 factor, Activator interacting domain (AID) CQB05_RS18745 PF04552 Sigma-54, DNA binding domain CQB05_RS18750 PF00005 ABC transporter CQB05_RS18760 PF00085 Thioredoxin CQB05_RS18760 PF01323 DSBA-like thioredoxin domain CQB05_RS18770 PF05746 DALR anticodon binding domain CQB05_RS18770 PF03485 Arginyl tRNA synthetase N terminal domain CQB05_RS18770 PF00750 tRNA synthetases class I (R) CQB05_RS18785 PF01011 PQQ enzyme repeat CQB05_RS18795 PF03466 LysR substrate binding domain CQB05_RS18795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS18800 PF01274 Malate synthase CQB05_RS18805 PF00672 HAMP domain CQB05_RS18805 PF02203 Tar ligand binding domain homologue CQB05_RS18805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS18815 PF01361 Tautomerase enzyme CQB05_RS18820 PF07690 Major Facilitator Superfamily CQB05_RS18825 PF13230 Glutamine amidotransferases class-II CQB05_RS18835 PF00589 Phage integrase family CQB05_RS18885 PF00440 Bacterial regulatory proteins, tetR family CQB05_RS18885 PF08361 MAATS-type transcriptional repressor, C-terminal region CQB05_RS18890 PF00529 HlyD membrane-fusion protein of T1SS CQB05_RS18890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQB05_RS18895 PF00873 AcrB/AcrD/AcrF family CQB05_RS18905 PF01344 Kelch motif CQB05_RS18955 PF08494 DEAD/H associated CQB05_RS18955 PF00271 Helicase conserved C-terminal domain CQB05_RS18955 PF00270 DEAD/DEAH box helicase CQB05_RS18960 PF04675 DNA ligase N terminus CQB05_RS18960 PF01068 ATP dependent DNA ligase domain CQB05_RS18960 PF04679 ATP dependent DNA ligase C terminal region CQB05_RS18965 PF01068 ATP dependent DNA ligase domain CQB05_RS18965 PF04679 ATP dependent DNA ligase C terminal region CQB05_RS18965 PF04675 DNA ligase N terminus CQB05_RS18970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CQB05_RS18975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQB05_RS18975 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQB05_RS18980 PF00231 ATP synthase CQB05_RS18985 PF00306 ATP synthase alpha/beta chain, C terminal domain CQB05_RS18985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQB05_RS18985 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQB05_RS18990 PF00213 ATP synthase delta (OSCP) subunit CQB05_RS18995 PF00430 ATP synthase B/B' CF(0) CQB05_RS19000 PF00137 ATP synthase subunit C CQB05_RS19005 PF00119 ATP synthase A chain CQB05_RS19015 PF04359 Protein of unknown function (DUF493) CQB05_RS19020 PF03099 Biotin/lipoate A/B protein ligase family CQB05_RS19025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CQB05_RS19025 PF04055 Radical SAM superfamily CQB05_RS19040 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS19040 PF00072 Response regulator receiver domain CQB05_RS19045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS19045 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS19045 PF13492 GAF domain CQB05_RS19045 PF02702 Osmosensitive K+ channel His kinase sensor domain CQB05_RS19045 PF13493 Domain of unknown function (DUF4118) CQB05_RS19050 PF02669 K+-transporting ATPase, c chain CQB05_RS19060 PF03814 Potassium-transporting ATPase A subunit CQB05_RS19070 PF05524 PEP-utilising enzyme, N-terminal CQB05_RS19070 PF02896 PEP-utilising enzyme, TIM barrel domain CQB05_RS19070 PF00391 PEP-utilising enzyme, mobile domain CQB05_RS19075 PF00381 PTS HPr component phosphorylation site CQB05_RS19090 PF00578 AhpC/TSA family CQB05_RS19100 PF08534 Redoxin CQB05_RS19105 PF00366 Ribosomal protein S17 CQB05_RS19110 PF00831 Ribosomal L29 protein CQB05_RS19115 PF00252 Ribosomal protein L16p/L10e CQB05_RS19120 PF07650 KH domain CQB05_RS19120 PF00189 Ribosomal protein S3, C-terminal domain CQB05_RS19125 PF00237 Ribosomal protein L22p/L17e CQB05_RS19130 PF00203 Ribosomal protein S19 CQB05_RS19135 PF03947 Ribosomal Proteins L2, C-terminal domain CQB05_RS19135 PF00181 Ribosomal Proteins L2, RNA binding domain CQB05_RS19140 PF00276 Ribosomal protein L23 CQB05_RS19145 PF00573 Ribosomal protein L4/L1 family CQB05_RS19150 PF00297 Ribosomal protein L3 CQB05_RS19155 PF00338 Ribosomal protein S10p/S20e CQB05_RS19160 PF03143 Elongation factor Tu C-terminal domain CQB05_RS19160 PF03144 Elongation factor Tu domain 2 CQB05_RS19160 PF00009 Elongation factor Tu GTP binding domain CQB05_RS19165 PF00679 Elongation factor G C-terminus CQB05_RS19165 PF00009 Elongation factor Tu GTP binding domain CQB05_RS19165 PF03764 Elongation factor G, domain IV CQB05_RS19165 PF14492 Elongation Factor G, domain II CQB05_RS19165 PF03144 Elongation factor Tu domain 2 CQB05_RS19170 PF00177 Ribosomal protein S7p/S5e CQB05_RS19175 PF00164 Ribosomal protein S12/S23 CQB05_RS19180 PF00768 D-alanyl-D-alanine carboxypeptidase CQB05_RS19180 PF07943 Penicillin-binding protein 5, C-terminal domain CQB05_RS19185 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CQB05_RS19200 PF03653 Uncharacterised protein family (UPF0093) CQB05_RS19205 PF00490 Delta-aminolevulinic acid dehydratase CQB05_RS19210 PF01544 CorA-like Mg2+ transporter protein CQB05_RS19215 PF00117 Glutamine amidotransferase class-I CQB05_RS19215 PF00958 GMP synthase C terminal domain CQB05_RS19215 PF02540 NAD synthase CQB05_RS19220 PF01047 MarR family CQB05_RS19225 PF02321 Outer membrane efflux protein CQB05_RS19230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQB05_RS19230 PF00529 HlyD membrane-fusion protein of T1SS CQB05_RS19235 PF07690 Major Facilitator Superfamily CQB05_RS19240 PF01738 Dienelactone hydrolase family CQB05_RS19250 PF01914 MarC family integral membrane protein CQB05_RS19255 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS19255 PF00072 Response regulator receiver domain CQB05_RS19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS19260 PF00672 HAMP domain CQB05_RS19260 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS19265 PF06123 Inner membrane protein CreD CQB05_RS19285 PF05532 CsbD-like CQB05_RS19290 PF01507 Phosphoadenosine phosphosulfate reductase family CQB05_RS19310 PF00005 ABC transporter CQB05_RS19315 PF02405 Permease MlaE CQB05_RS19320 PF00732 GMC oxidoreductase CQB05_RS19320 PF05199 GMC oxidoreductase CQB05_RS19325 PF01925 Sulfite exporter TauE/SafE CQB05_RS19330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS19330 PF03466 LysR substrate binding domain CQB05_RS19335 PF03313 Serine dehydratase alpha chain CQB05_RS19335 PF03315 Serine dehydratase beta chain CQB05_RS19340 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS19345 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS19350 PF00005 ABC transporter CQB05_RS19360 PF00905 Penicillin binding protein transpeptidase domain CQB05_RS19360 PF03717 Penicillin-binding Protein dimerisation domain CQB05_RS19365 PF04093 rod shape-determining protein MreD CQB05_RS19380 PF02686 Glu-tRNAGln amidotransferase C subunit CQB05_RS19385 PF01425 Amidase CQB05_RS19390 PF02934 GatB/GatE catalytic domain CQB05_RS19390 PF02637 GatB domain CQB05_RS19400 PF00156 Phosphoribosyl transferase domain CQB05_RS19405 PF03372 Endonuclease/Exonuclease/phosphatase family CQB05_RS19410 PF00248 Aldo/keto reductase family CQB05_RS19415 PF07690 Major Facilitator Superfamily CQB05_RS19420 PF03466 LysR substrate binding domain CQB05_RS19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS19440 PF00753 Metallo-beta-lactamase superfamily CQB05_RS19445 PF00939 Sodium:sulfate symporter transmembrane region CQB05_RS19450 PF01435 Peptidase family M48 CQB05_RS19470 PF07690 Major Facilitator Superfamily CQB05_RS19475 PF00072 Response regulator receiver domain CQB05_RS19475 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS19485 PF06779 Uncharacterised MFS-type transporter YbfB CQB05_RS19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS19490 PF03466 LysR substrate binding domain CQB05_RS19495 PF03060 Nitronate monooxygenase CQB05_RS19530 PF01063 Amino-transferase class IV CQB05_RS19540 PF18073 Rubredoxin metal binding domain CQB05_RS19550 PF08546 Ketopantoate reductase PanE/ApbA C terminal CQB05_RS19550 PF02558 Ketopantoate reductase PanE/ApbA CQB05_RS19565 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS19575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQB05_RS19585 PF00842 Alanine racemase, C-terminal domain CQB05_RS19585 PF01168 Alanine racemase, N-terminal domain CQB05_RS19590 PF07690 Major Facilitator Superfamily CQB05_RS19600 PF00255 Glutathione peroxidase CQB05_RS19630 PF13183 4Fe-4S dicluster domain CQB05_RS19630 PF02754 Cysteine-rich domain CQB05_RS19640 PF01565 FAD binding domain CQB05_RS19645 PF06715 Gp5 C-terminal repeat (3 copies) CQB05_RS19645 PF04717 Type VI secretion system, phage-baseplate injector CQB05_RS19675 PF08450 SMP-30/Gluconolactonase/LRE-like region CQB05_RS19680 PF00909 Ammonium Transporter Family CQB05_RS19685 PF00543 Nitrogen regulatory protein P-II CQB05_RS19695 PF01078 Magnesium chelatase, subunit ChlI CQB05_RS19695 PF13335 Magnesium chelatase, subunit ChlI C-terminal CQB05_RS19700 PF00158 Sigma-54 interaction domain CQB05_RS19700 PF00072 Response regulator receiver domain CQB05_RS19700 PF02954 Bacterial regulatory protein, Fis family CQB05_RS19705 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS19710 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS19715 PF02203 Tar ligand binding domain homologue CQB05_RS19715 PF00672 HAMP domain CQB05_RS19715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS19725 PF03466 LysR substrate binding domain CQB05_RS19730 PF00175 Oxidoreductase NAD-binding domain CQB05_RS19730 PF00970 Oxidoreductase FAD-binding domain CQB05_RS19750 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS19750 PF00563 EAL domain CQB05_RS19750 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS19755 PF05506 Domain of unknown function (DUF756) CQB05_RS19755 PF04185 Phosphoesterase family CQB05_RS19770 PF01204 Trehalase CQB05_RS19785 PF02574 Homocysteine S-methyltransferase CQB05_RS19785 PF00809 Pterin binding enzyme CQB05_RS19785 PF02965 Vitamin B12 dependent methionine synthase, activation domain CQB05_RS19785 PF02607 B12 binding domain CQB05_RS19785 PF02310 B12 binding domain CQB05_RS19795 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS19795 PF07729 FCD domain CQB05_RS19805 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS19810 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS19815 PF00005 ABC transporter CQB05_RS19820 PF04115 Ureidoglycolate lyase CQB05_RS19830 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS19855 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS19860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQB05_RS19860 PF13378 Enolase C-terminal domain-like CQB05_RS19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS19895 PF07715 TonB-dependent Receptor Plug Domain CQB05_RS19895 PF00593 TonB dependent receptor CQB05_RS19900 PF01425 Amidase CQB05_RS19905 PF03976 Polyphosphate kinase 2 (PPK2) CQB05_RS19915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQB05_RS19915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQB05_RS19950 PF16124 RecQ zinc-binding CQB05_RS19950 PF00270 DEAD/DEAH box helicase CQB05_RS19950 PF00271 Helicase conserved C-terminal domain CQB05_RS19950 PF00570 HRDC domain CQB05_RS19950 PF09382 RQC domain CQB05_RS19955 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS19965 PF02515 CoA-transferase family III CQB05_RS19975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS19975 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS19975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS19980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS19980 PF03466 LysR substrate binding domain CQB05_RS19985 PF02965 Vitamin B12 dependent methionine synthase, activation domain CQB05_RS19985 PF02574 Homocysteine S-methyltransferase CQB05_RS19985 PF00809 Pterin binding enzyme CQB05_RS19985 PF02310 B12 binding domain CQB05_RS19985 PF02607 B12 binding domain CQB05_RS19990 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS19995 PF00158 Sigma-54 interaction domain CQB05_RS19995 PF02954 Bacterial regulatory protein, Fis family CQB05_RS19995 PF00072 Response regulator receiver domain CQB05_RS20010 PF07690 Major Facilitator Superfamily CQB05_RS20015 PF00672 HAMP domain CQB05_RS20015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS20015 PF02203 Tar ligand binding domain homologue CQB05_RS20020 PF00355 Rieske [2Fe-2S] domain CQB05_RS20025 PF13577 SnoaL-like domain CQB05_RS20030 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CQB05_RS20030 PF00355 Rieske [2Fe-2S] domain CQB05_RS20035 PF00111 2Fe-2S iron-sulfur cluster binding domain CQB05_RS20035 PF00970 Oxidoreductase FAD-binding domain CQB05_RS20035 PF00175 Oxidoreductase NAD-binding domain CQB05_RS20045 PF04851 Type III restriction enzyme, res subunit CQB05_RS20045 PF08774 VRR-NUC domain CQB05_RS20060 PF01555 DNA methylase CQB05_RS20060 PF18273 Type III R-M EcoP15I C-terminal domain CQB05_RS20070 PF00176 SNF2 family N-terminal domain CQB05_RS20070 PF00271 Helicase conserved C-terminal domain CQB05_RS20080 PF03922 OmpW family CQB05_RS20100 PF02423 Ornithine cyclodeaminase/mu-crystallin family CQB05_RS20110 PF07690 Major Facilitator Superfamily CQB05_RS20115 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS20115 PF14497 Glutathione S-transferase, C-terminal domain CQB05_RS20120 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQB05_RS20125 PF07883 Cupin domain CQB05_RS20130 PF03466 LysR substrate binding domain CQB05_RS20130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS20135 PF18158 Adaptive response protein AidB N-terminal domain CQB05_RS20135 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS20135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS20145 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS20145 PF13291 ACT domain CQB05_RS20150 PF04349 Periplasmic glucan biosynthesis protein, MdoG CQB05_RS20155 PF06508 Queuosine biosynthesis protein QueC CQB05_RS20160 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CQB05_RS20160 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CQB05_RS20180 PF00582 Universal stress protein family CQB05_RS20185 PF00440 Bacterial regulatory proteins, tetR family CQB05_RS20190 PF03466 LysR substrate binding domain CQB05_RS20190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS20195 PF01266 FAD dependent oxidoreductase CQB05_RS20200 PF02525 Flavodoxin-like fold CQB05_RS20210 PF00561 alpha/beta hydrolase fold CQB05_RS20215 PF01613 Flavin reductase like domain CQB05_RS20220 PF03776 Septum formation topological specificity factor MinE CQB05_RS20225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQB05_RS20230 PF05209 Septum formation inhibitor MinC, N-terminal domain CQB05_RS20230 PF03775 Septum formation inhibitor MinC, C-terminal domain CQB05_RS20235 PF01066 CDP-alcohol phosphatidyltransferase CQB05_RS20245 PF02423 Ornithine cyclodeaminase/mu-crystallin family CQB05_RS20250 PF00491 Arginase family CQB05_RS20255 PF00501 AMP-binding enzyme CQB05_RS20255 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS20265 PF01435 Peptidase family M48 CQB05_RS20270 PF09339 IclR helix-turn-helix domain CQB05_RS20270 PF01614 Bacterial transcriptional regulator CQB05_RS20275 PF00171 Aldehyde dehydrogenase family CQB05_RS20285 PF01494 FAD binding domain CQB05_RS20290 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS20295 PF00005 ABC transporter CQB05_RS20300 PF12706 Beta-lactamase superfamily domain CQB05_RS20325 PF00132 Bacterial transferase hexapeptide (six repeats) CQB05_RS20335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS20335 PF02203 Tar ligand binding domain homologue CQB05_RS20335 PF00672 HAMP domain CQB05_RS20345 PF00860 Permease family CQB05_RS20355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CQB05_RS20355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CQB05_RS20360 PF03061 Thioesterase superfamily CQB05_RS20365 PF01923 Cobalamin adenosyltransferase CQB05_RS20380 PF02913 FAD linked oxidases, C-terminal domain CQB05_RS20380 PF01565 FAD binding domain CQB05_RS20430 PF03543 Yersinia/Haemophilus virulence surface antigen CQB05_RS20455 PF01613 Flavin reductase like domain CQB05_RS20475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQB05_RS20475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQB05_RS20490 PF01890 Cobalamin synthesis G C-terminus CQB05_RS20490 PF11761 Cobalamin biosynthesis central region CQB05_RS20490 PF11760 Cobalamin synthesis G N-terminal CQB05_RS20500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQB05_RS20505 PF01888 CbiD CQB05_RS20510 PF02570 Precorrin-8X methylmutase CQB05_RS20515 PF01903 CbiX CQB05_RS20520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQB05_RS20525 PF00135 Carboxylesterase family CQB05_RS20540 PF01040 UbiA prenyltransferase family CQB05_RS20545 PF04030 D-arabinono-1,4-lactone oxidase CQB05_RS20545 PF01565 FAD binding domain CQB05_RS20550 PF00106 short chain dehydrogenase CQB05_RS20565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQB05_RS20565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CQB05_RS20580 PF17762 HTH domain found in ParB protein CQB05_RS20580 PF02195 ParB-like nuclease domain CQB05_RS20590 PF13614 AAA domain CQB05_RS20595 PF01810 LysE type translocator CQB05_RS20600 PF02527 rRNA small subunit methyltransferase G CQB05_RS20605 PF01134 Glucose inhibited division protein A CQB05_RS20605 PF13932 GidA associated domain CQB05_RS20610 PF03358 NADPH-dependent FMN reductase CQB05_RS20615 PF03692 Putative zinc- or iron-chelating domain CQB05_RS20620 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS20620 PF02798 Glutathione S-transferase, N-terminal domain CQB05_RS20625 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS20630 PF00005 ABC transporter CQB05_RS20650 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS20655 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS20655 PF00072 Response regulator receiver domain CQB05_RS20665 PF00529 HlyD membrane-fusion protein of T1SS CQB05_RS20665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQB05_RS20670 PF00873 AcrB/AcrD/AcrF family CQB05_RS20685 PF02203 Tar ligand binding domain homologue CQB05_RS20685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS20685 PF00672 HAMP domain CQB05_RS20690 PF00403 Heavy-metal-associated domain CQB05_RS20700 PF09278 MerR, DNA binding CQB05_RS20700 PF00376 MerR family regulatory protein CQB05_RS20705 PF02803 Thiolase, C-terminal domain CQB05_RS20705 PF00108 Thiolase, N-terminal domain CQB05_RS20730 PF07670 Nucleoside recognition CQB05_RS20735 PF04381 Putative exonuclease, RdgC CQB05_RS20755 PF00793 DAHP synthetase I family CQB05_RS20760 PF00877 NlpC/P60 family CQB05_RS20765 PF00682 HMGL-like CQB05_RS20765 PF08502 LeuA allosteric (dimerisation) domain CQB05_RS20775 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS20775 PF00155 Aminotransferase class I and II CQB05_RS20780 PF00929 Exonuclease CQB05_RS20780 PF14579 Helix-hairpin-helix motif CQB05_RS20780 PF11490 DNA polymerase III polC-type N-terminus II CQB05_RS20780 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQB05_RS20780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQB05_RS20780 PF02811 PHP domain CQB05_RS20780 PF14480 DNA polymerase III polC-type N-terminus I CQB05_RS20795 PF06733 DEAD_2 CQB05_RS20795 PF13307 Helicase C-terminal domain CQB05_RS20815 PF02566 OsmC-like protein CQB05_RS20845 PF01751 Toprim domain CQB05_RS20845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS20845 PF18053 DNA gyrase B subunit insert domain CQB05_RS20845 PF00986 DNA gyrase B subunit, carboxyl terminus CQB05_RS20845 PF00204 DNA gyrase B CQB05_RS20850 PF02768 DNA polymerase III beta subunit, C-terminal domain CQB05_RS20850 PF02767 DNA polymerase III beta subunit, central domain CQB05_RS20850 PF00712 DNA polymerase III beta subunit, N-terminal domain CQB05_RS20855 PF00308 Bacterial dnaA protein CQB05_RS20855 PF08299 Bacterial dnaA protein helix-turn-helix CQB05_RS20855 PF11638 DnaA N-terminal domain CQB05_RS20860 PF00468 Ribosomal protein L34 CQB05_RS20865 PF00825 Ribonuclease P CQB05_RS20870 PF01809 Putative membrane protein insertion efficiency factor CQB05_RS20875 PF14849 YidC periplasmic domain CQB05_RS20875 PF02096 60Kd inner membrane protein CQB05_RS20885 PF01926 50S ribosome-binding GTPase CQB05_RS20885 PF10396 GTP-binding protein TrmE N-terminus CQB05_RS20885 PF12631 MnmE helical domain CQB05_RS20900 PF00667 FAD binding domain CQB05_RS20900 PF00258 Flavodoxin CQB05_RS20900 PF00175 Oxidoreductase NAD-binding domain CQB05_RS20905 PF00156 Phosphoribosyl transferase domain CQB05_RS20910 PF00999 Sodium/hydrogen exchanger family CQB05_RS20910 PF02080 TrkA-C domain CQB05_RS20910 PF02254 TrkA-N domain CQB05_RS20915 PF01380 SIS domain CQB05_RS20915 PF00571 CBS domain CQB05_RS20930 PF00106 short chain dehydrogenase CQB05_RS20935 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CQB05_RS20940 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CQB05_RS20945 PF01169 Uncharacterized protein family UPF0016 CQB05_RS20950 PF00561 alpha/beta hydrolase fold CQB05_RS20960 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS20965 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CQB05_RS20970 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CQB05_RS20975 PF00324 Amino acid permease CQB05_RS20980 PF12833 Helix-turn-helix domain CQB05_RS20990 PF07690 Major Facilitator Superfamily CQB05_RS20995 PF02463 RecF/RecN/SMC N terminal domain CQB05_RS20995 PF06470 SMC proteins Flexible Hinge Domain CQB05_RS21010 PF04452 RNA methyltransferase CQB05_RS21015 PF01636 Phosphotransferase enzyme family CQB05_RS21020 PF04453 LPS transport system D CQB05_RS21025 PF00639 PPIC-type PPIASE domain CQB05_RS21025 PF09312 SurA N-terminal domain CQB05_RS21030 PF00398 Ribosomal RNA adenine dimethylase CQB05_RS21040 PF00545 ribonuclease CQB05_RS21045 PF00390 Malic enzyme, N-terminal domain CQB05_RS21045 PF03949 Malic enzyme, NAD binding domain CQB05_RS21045 PF01515 Phosphate acetyl/butaryl transferase CQB05_RS21060 PF07364 Metallopeptidase family M81 CQB05_RS21060 PF07171 MlrC C-terminus CQB05_RS21065 PF01546 Peptidase family M20/M25/M40 CQB05_RS21065 PF07687 Peptidase dimerisation domain CQB05_RS21070 PF00005 ABC transporter CQB05_RS21075 PF00005 ABC transporter CQB05_RS21075 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQB05_RS21080 PF11862 Domain of unknown function (DUF3382) CQB05_RS21080 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS21095 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS21095 PF07729 FCD domain CQB05_RS21100 PF00072 Response regulator receiver domain CQB05_RS21100 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS21110 PF00171 Aldehyde dehydrogenase family CQB05_RS21120 PF00202 Aminotransferase class-III CQB05_RS21125 PF03466 LysR substrate binding domain CQB05_RS21125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS21155 PF02558 Ketopantoate reductase PanE/ApbA CQB05_RS21155 PF08546 Ketopantoate reductase PanE/ApbA C terminal CQB05_RS21180 PF00072 Response regulator receiver domain CQB05_RS21180 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS21180 PF13188 PAS domain CQB05_RS21180 PF08448 PAS fold CQB05_RS21180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS21185 PF00677 Lumazine binding domain CQB05_RS21190 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS21215 PF00293 NUDIX domain CQB05_RS21225 PF02652 L-lactate permease CQB05_RS21240 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS21245 PF00753 Metallo-beta-lactamase superfamily CQB05_RS21255 PF04143 Sulphur transport CQB05_RS21275 PF00436 Single-strand binding protein family CQB05_RS21285 PF07690 Major Facilitator Superfamily CQB05_RS21325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS21325 PF00672 HAMP domain CQB05_RS21325 PF02203 Tar ligand binding domain homologue CQB05_RS21330 PF00892 EamA-like transporter family CQB05_RS21335 PF00893 Small Multidrug Resistance protein CQB05_RS21345 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS21355 PF01757 Acyltransferase family CQB05_RS21360 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CQB05_RS21365 PF00892 EamA-like transporter family CQB05_RS21375 PF00162 Phosphoglycerate kinase CQB05_RS21390 PF02911 Formyl transferase, C-terminal domain CQB05_RS21390 PF00551 Formyl transferase CQB05_RS21400 PF01327 Polypeptide deformylase CQB05_RS21410 PF17782 DprA winged helix domain CQB05_RS21410 PF02481 DNA recombination-mediator protein A CQB05_RS21415 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQB05_RS21420 PF08442 ATP-grasp domain CQB05_RS21420 PF00549 CoA-ligase CQB05_RS21425 PF02629 CoA binding domain CQB05_RS21425 PF00549 CoA-ligase CQB05_RS21430 PF03741 Integral membrane protein TerC family CQB05_RS21440 PF00498 FHA domain CQB05_RS21440 PF12773 Double zinc ribbon CQB05_RS21445 PF00114 Pilin (bacterial filament) CQB05_RS21445 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS21450 PF15864 Protein glycosylation ligase CQB05_RS21450 PF04932 O-Antigen ligase CQB05_RS21450 PF11846 Virulence factor membrane-bound polymerase, C-terminal CQB05_RS21455 PF01967 MoaC family CQB05_RS21460 PF01435 Peptidase family M48 CQB05_RS21460 PF13181 Tetratricopeptide repeat CQB05_RS21465 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CQB05_RS21475 PF03741 Integral membrane protein TerC family CQB05_RS21490 PF07152 YaeQ protein CQB05_RS21495 PF00206 Lyase CQB05_RS21495 PF08328 Adenylosuccinate lyase C-terminal CQB05_RS21500 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS21500 PF13417 Glutathione S-transferase, N-terminal domain CQB05_RS21505 PF00255 Glutathione peroxidase CQB05_RS21510 PF01966 HD domain CQB05_RS21510 PF11871 Domain of unknown function (DUF3391) CQB05_RS21520 PF00873 AcrB/AcrD/AcrF family CQB05_RS21525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQB05_RS21530 PF02321 Outer membrane efflux protein CQB05_RS21535 PF08361 MAATS-type transcriptional repressor, C-terminal region CQB05_RS21535 PF00440 Bacterial regulatory proteins, tetR family CQB05_RS21550 PF00501 AMP-binding enzyme CQB05_RS21550 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS21550 PF00550 Phosphopantetheine attachment site CQB05_RS21550 PF00975 Thioesterase domain CQB05_RS21550 PF00668 Condensation domain CQB05_RS21555 PF08335 GlnD PII-uridylyltransferase CQB05_RS21555 PF03710 Glutamate-ammonia ligase adenylyltransferase CQB05_RS21565 PF00795 Carbon-nitrogen hydrolase CQB05_RS21570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS21570 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS21570 PF00989 PAS fold CQB05_RS21575 PF00072 Response regulator receiver domain CQB05_RS21575 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS21580 PF04972 BON domain CQB05_RS21580 PF00691 OmpA family CQB05_RS21585 PF03562 MltA specific insert domain CQB05_RS21585 PF06725 3D domain CQB05_RS21605 PF05977 Transmembrane secretion effector CQB05_RS21615 PF01037 Lrp/AsnC ligand binding domain CQB05_RS21625 PF02699 Preprotein translocase subunit CQB05_RS21630 PF07549 SecD/SecF GG Motif CQB05_RS21630 PF13721 SecD export protein N-terminal TM region CQB05_RS21630 PF02355 Protein export membrane protein CQB05_RS21635 PF07549 SecD/SecF GG Motif CQB05_RS21635 PF02355 Protein export membrane protein CQB05_RS21645 PF02631 RecX family CQB05_RS21650 PF00154 recA bacterial DNA recombination protein CQB05_RS21660 PF00072 Response regulator receiver domain CQB05_RS21660 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS21675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS21675 PF03466 LysR substrate binding domain CQB05_RS21680 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS21705 PF02237 Biotin protein ligase C terminal domain CQB05_RS21705 PF08279 HTH domain CQB05_RS21705 PF03099 Biotin/lipoate A/B protein ligase family CQB05_RS21715 PF01751 Toprim domain CQB05_RS21715 PF01131 DNA topoisomerase CQB05_RS21740 PF06271 RDD family CQB05_RS21760 PF00580 UvrD/REP helicase N-terminal domain CQB05_RS21760 PF13361 UvrD-like helicase C-terminal domain CQB05_RS21790 PF06983 3-demethylubiquinone-9 3-methyltransferase CQB05_RS21805 PF00106 short chain dehydrogenase CQB05_RS21810 PF00884 Sulfatase CQB05_RS21835 PF05726 Pirin C-terminal cupin domain CQB05_RS21835 PF02678 Pirin CQB05_RS21875 PF07722 Peptidase C26 CQB05_RS21900 PF05736 OprF membrane domain CQB05_RS21900 PF00691 OmpA family CQB05_RS21920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CQB05_RS21920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CQB05_RS21940 PF00456 Transketolase, thiamine diphosphate binding domain CQB05_RS21940 PF02780 Transketolase, C-terminal domain CQB05_RS21940 PF02779 Transketolase, pyrimidine binding domain CQB05_RS21950 PF00483 Nucleotidyl transferase CQB05_RS21955 PF05195 Aminopeptidase P, N-terminal domain CQB05_RS21955 PF00557 Metallopeptidase family M24 CQB05_RS21960 PF02887 Pyruvate kinase, alpha/beta domain CQB05_RS21960 PF00224 Pyruvate kinase, barrel domain CQB05_RS21975 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS21975 PF00072 Response regulator receiver domain CQB05_RS21980 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS21980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS21985 PF01116 Fructose-bisphosphate aldolase class-II CQB05_RS21995 PF00501 AMP-binding enzyme CQB05_RS21995 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS22000 PF01048 Phosphorylase superfamily CQB05_RS22005 PF01544 CorA-like Mg2+ transporter protein CQB05_RS22020 PF00814 Glycoprotease family CQB05_RS22045 PF03481 Putative GTP-binding controlling metal-binding CQB05_RS22045 PF01300 Telomere recombination CQB05_RS22050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CQB05_RS22050 PF02222 ATP-grasp domain CQB05_RS22055 PF00731 AIR carboxylase CQB05_RS22070 PF01259 SAICAR synthetase CQB05_RS22075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CQB05_RS22080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQB05_RS22085 PF07475 HPr Serine kinase C-terminal domain CQB05_RS22085 PF02603 HPr Serine kinase N terminus CQB05_RS22090 PF01475 Ferric uptake regulator family CQB05_RS22095 PF04355 SmpA / OmlA family CQB05_RS22100 PF01113 Dihydrodipicolinate reductase, N-terminus CQB05_RS22100 PF05173 Dihydrodipicolinate reductase, C-terminus CQB05_RS22105 PF01618 MotA/TolQ/ExbB proton channel family CQB05_RS22110 PF02472 Biopolymer transport protein ExbD/TolR CQB05_RS22115 PF00563 EAL domain CQB05_RS22115 PF13188 PAS domain CQB05_RS22115 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS22115 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS22125 PF09334 tRNA synthetases class I (M) CQB05_RS22125 PF13603 Leucyl-tRNA synthetase, Domain 2 CQB05_RS22125 PF00133 tRNA synthetases class I (I, L, M and V) CQB05_RS22125 PF08264 Anticodon-binding domain of tRNA CQB05_RS22145 PF00171 Aldehyde dehydrogenase family CQB05_RS22150 PF02080 TrkA-C domain CQB05_RS22150 PF02254 TrkA-N domain CQB05_RS22155 PF02386 Cation transport protein CQB05_RS22165 PF02705 K+ potassium transporter CQB05_RS22170 PF03594 Benzoate membrane transport protein CQB05_RS22175 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CQB05_RS22175 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CQB05_RS22220 PF00009 Elongation factor Tu GTP binding domain CQB05_RS22220 PF03143 Elongation factor Tu C-terminal domain CQB05_RS22220 PF03144 Elongation factor Tu domain 2 CQB05_RS22230 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CQB05_RS22235 PF00467 KOW motif CQB05_RS22235 PF02357 Transcription termination factor nusG CQB05_RS22240 PF03946 Ribosomal protein L11, N-terminal domain CQB05_RS22240 PF00298 Ribosomal protein L11, RNA binding domain CQB05_RS22245 PF00687 Ribosomal protein L1p/L10e family CQB05_RS22250 PF00466 Ribosomal protein L10 CQB05_RS22255 PF16320 Ribosomal protein L7/L12 dimerisation domain CQB05_RS22255 PF00542 Ribosomal protein L7/L12 C-terminal domain CQB05_RS22260 PF04563 RNA polymerase beta subunit CQB05_RS22260 PF04561 RNA polymerase Rpb2, domain 2 CQB05_RS22260 PF04565 RNA polymerase Rpb2, domain 3 CQB05_RS22260 PF04560 RNA polymerase Rpb2, domain 7 CQB05_RS22260 PF00562 RNA polymerase Rpb2, domain 6 CQB05_RS22260 PF10385 RNA polymerase beta subunit external 1 domain CQB05_RS22265 PF04983 RNA polymerase Rpb1, domain 3 CQB05_RS22265 PF00623 RNA polymerase Rpb1, domain 2 CQB05_RS22265 PF04998 RNA polymerase Rpb1, domain 5 CQB05_RS22265 PF05000 RNA polymerase Rpb1, domain 4 CQB05_RS22265 PF04997 RNA polymerase Rpb1, domain 1 CQB05_RS22275 PF01189 16S rRNA methyltransferase RsmB/F CQB05_RS22275 PF01029 NusB family CQB05_RS22285 PF00989 PAS fold CQB05_RS22285 PF00672 HAMP domain CQB05_RS22285 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS22290 PF00158 Sigma-54 interaction domain CQB05_RS22290 PF00072 Response regulator receiver domain CQB05_RS22290 PF02954 Bacterial regulatory protein, Fis family CQB05_RS22305 PF00080 Copper/zinc superoxide dismutase (SODC) CQB05_RS22310 PF07995 Glucose / Sorbosone dehydrogenase CQB05_RS22315 PF13391 HNH endonuclease CQB05_RS22320 PF07804 HipA-like C-terminal domain CQB05_RS22320 PF13657 HipA N-terminal domain CQB05_RS22330 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CQB05_RS22345 PF00005 ABC transporter CQB05_RS22350 PF00528 Binding-protein-dependent transport system inner membrane component CQB05_RS22365 PF13350 Tyrosine phosphatase family CQB05_RS22385 PF01266 FAD dependent oxidoreductase CQB05_RS22395 PF13454 FAD-NAD(P)-binding CQB05_RS22405 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS22445 PF02203 Tar ligand binding domain homologue CQB05_RS22445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS22445 PF00672 HAMP domain CQB05_RS22450 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS22455 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS22460 PF01037 Lrp/AsnC ligand binding domain CQB05_RS22515 PF01702 Queuine tRNA-ribosyltransferase CQB05_RS22520 PF00582 Universal stress protein family CQB05_RS22530 PF02253 Phospholipase A1 CQB05_RS22535 PF13361 UvrD-like helicase C-terminal domain CQB05_RS22535 PF00580 UvrD/REP helicase N-terminal domain CQB05_RS22555 PF00270 DEAD/DEAH box helicase CQB05_RS22555 PF00271 Helicase conserved C-terminal domain CQB05_RS22555 PF18074 Primosomal protein N C-terminal domain CQB05_RS22555 PF17764 3′ DNA-binding domain (3′BD) CQB05_RS22555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CQB05_RS22560 PF01208 Uroporphyrinogen decarboxylase (URO-D) CQB05_RS22570 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS22575 PF00884 Sulfatase CQB05_RS22575 PF16385 Domain of unknown function CQB05_RS22595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS22595 PF03466 LysR substrate binding domain CQB05_RS22600 PF03741 Integral membrane protein TerC family CQB05_RS22630 PF02272 DHHA1 domain CQB05_RS22630 PF01411 tRNA synthetases class II (A) CQB05_RS22630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQB05_RS22635 PF00107 Zinc-binding dehydrogenase CQB05_RS22635 PF08240 Alcohol dehydrogenase GroES-like domain CQB05_RS22640 PF03466 LysR substrate binding domain CQB05_RS22640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS22645 PF01970 Tripartite tricarboxylate transporter TctA family CQB05_RS22675 PF02203 Tar ligand binding domain homologue CQB05_RS22675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS22675 PF00672 HAMP domain CQB05_RS22700 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS22710 PF02567 Phenazine biosynthesis-like protein CQB05_RS22715 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS22715 PF13417 Glutathione S-transferase, N-terminal domain CQB05_RS22720 PF00155 Aminotransferase class I and II CQB05_RS22725 PF00892 EamA-like transporter family CQB05_RS22730 PF01810 LysE type translocator CQB05_RS22735 PF00155 Aminotransferase class I and II CQB05_RS22735 PF00392 Bacterial regulatory proteins, gntR family CQB05_RS22750 PF00669 Bacterial flagellin N-terminal helical region CQB05_RS22750 PF00700 Bacterial flagellin C-terminal helical region CQB05_RS22760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CQB05_RS22760 PF10135 Rod binding protein CQB05_RS22765 PF02119 Flagellar P-ring protein CQB05_RS22775 PF02107 Flagellar L-ring protein CQB05_RS22780 PF00460 Flagella basal body rod protein CQB05_RS22780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQB05_RS22785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQB05_RS22785 PF00460 Flagella basal body rod protein CQB05_RS22790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQB05_RS22790 PF07559 Flagellar basal body protein FlaE CQB05_RS22790 PF00460 Flagella basal body rod protein CQB05_RS22795 PF03963 Flagellar hook capping protein - N-terminal region CQB05_RS22795 PF13861 FlgD Tudor-like domain CQB05_RS22795 PF13860 FlgD Ig-like domain CQB05_RS22800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQB05_RS22800 PF00460 Flagella basal body rod protein CQB05_RS22805 PF00460 Flagella basal body rod protein CQB05_RS22825 PF04539 Sigma-70 region 3 CQB05_RS22825 PF04545 Sigma-70, region 4 CQB05_RS22825 PF04542 Sigma-70 region 2 CQB05_RS22835 PF00448 SRP54-type protein, GTPase domain CQB05_RS22840 PF00771 FHIPEP family CQB05_RS22845 PF01312 FlhB HrpN YscU SpaS Family CQB05_RS22850 PF04344 Chemotaxis phosphatase, CheZ CQB05_RS22855 PF00072 Response regulator receiver domain CQB05_RS22860 PF13677 Membrane MotB of proton-channel complex MotA/MotB CQB05_RS22860 PF00691 OmpA family CQB05_RS22865 PF01618 MotA/TolQ/ExbB proton channel family CQB05_RS22870 PF00535 Glycosyl transferase family 2 CQB05_RS22875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CQB05_RS22880 PF01266 FAD dependent oxidoreductase CQB05_RS22890 PF13649 Methyltransferase domain CQB05_RS22895 PF08889 WbqC-like protein family CQB05_RS22900 PF00700 Bacterial flagellin C-terminal helical region CQB05_RS22900 PF00669 Bacterial flagellin N-terminal helical region CQB05_RS22905 PF00700 Bacterial flagellin C-terminal helical region CQB05_RS22905 PF00669 Bacterial flagellin N-terminal helical region CQB05_RS22910 PF07195 Flagellar hook-associated protein 2 C-terminus CQB05_RS22910 PF02465 Flagellar hook-associated protein 2 N-terminus CQB05_RS22910 PF07196 Flagellin hook IN motif CQB05_RS22915 PF02561 Flagellar protein FliS CQB05_RS22925 PF02049 Flagellar hook-basal body complex protein FliE CQB05_RS22930 PF08345 Flagellar M-ring protein C-terminal CQB05_RS22930 PF01514 Secretory protein of YscJ/FliF family CQB05_RS22935 PF14841 FliG middle domain CQB05_RS22935 PF01706 FliG C-terminal domain CQB05_RS22935 PF14842 FliG N-terminal domain CQB05_RS22945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQB05_RS22945 PF18269 T3SS EscN ATPase C-terminal domain CQB05_RS22960 PF03748 Flagellar basal body-associated protein FliL CQB05_RS22965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CQB05_RS22965 PF02154 Flagellar motor switch protein FliM CQB05_RS22970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CQB05_RS22970 PF16973 Flagellar motor switch protein FliN N-terminal CQB05_RS22980 PF00813 FliP family CQB05_RS22985 PF01313 Bacterial export proteins, family 3 CQB05_RS22990 PF01311 Bacterial export proteins, family 1 CQB05_RS22995 PF00072 Response regulator receiver domain CQB05_RS22995 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS23000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS23000 PF05231 MASE1 CQB05_RS23000 PF07730 Histidine kinase CQB05_RS23010 PF00072 Response regulator receiver domain CQB05_RS23015 PF01627 Hpt domain CQB05_RS23015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS23015 PF02895 Signal transducing histidine kinase, homodimeric domain CQB05_RS23015 PF09078 CheY binding CQB05_RS23015 PF01584 CheW-like domain CQB05_RS23020 PF01584 CheW-like domain CQB05_RS23025 PF01739 CheR methyltransferase, SAM binding domain CQB05_RS23025 PF03705 CheR methyltransferase, all-alpha domain CQB05_RS23030 PF03975 CheD chemotactic sensory transduction CQB05_RS23035 PF01339 CheB methylesterase CQB05_RS23035 PF00072 Response regulator receiver domain CQB05_RS23040 PF00005 ABC transporter CQB05_RS23040 PF16326 ABC transporter C-terminal domain CQB05_RS23040 PF12848 ABC transporter CQB05_RS23070 PF13411 MerR HTH family regulatory protein CQB05_RS23075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS23075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS23075 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS23080 PF00484 Carbonic anhydrase CQB05_RS23085 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CQB05_RS23090 PF02803 Thiolase, C-terminal domain CQB05_RS23090 PF00108 Thiolase, N-terminal domain CQB05_RS23105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS23105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS23105 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS23110 PF03575 Peptidase family S51 CQB05_RS23125 PF01627 Hpt domain CQB05_RS23125 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS23125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS23125 PF00072 Response regulator receiver domain CQB05_RS23130 PF13419 Haloacid dehalogenase-like hydrolase CQB05_RS23150 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS23150 PF00501 AMP-binding enzyme CQB05_RS23155 PF01039 Carboxyl transferase domain CQB05_RS23160 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS23175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQB05_RS23180 PF00682 HMGL-like CQB05_RS23195 PF01323 DSBA-like thioredoxin domain CQB05_RS23200 PF00083 Sugar (and other) transporter CQB05_RS23200 PF08946 Osmosensory transporter coiled coil CQB05_RS23205 PF13609 Gram-negative porin CQB05_RS23210 PF13609 Gram-negative porin CQB05_RS23220 PF13458 Periplasmic binding protein CQB05_RS23260 PF00202 Aminotransferase class-III CQB05_RS23275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CQB05_RS23285 PF00892 EamA-like transporter family CQB05_RS23305 PF02687 FtsX-like permease family CQB05_RS23305 PF12704 MacB-like periplasmic core domain CQB05_RS23305 PF00005 ABC transporter CQB05_RS23315 PF02321 Outer membrane efflux protein CQB05_RS23320 PF00072 Response regulator receiver domain CQB05_RS23320 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS23325 PF00672 HAMP domain CQB05_RS23325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS23325 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS23330 PF01979 Amidohydrolase family CQB05_RS23345 PF01435 Peptidase family M48 CQB05_RS23350 PF03466 LysR substrate binding domain CQB05_RS23350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS23355 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS23355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQB05_RS23355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQB05_RS23360 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS23360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS23360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS23365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQB05_RS23365 PF02770 Acyl-CoA dehydrogenase, middle domain CQB05_RS23365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQB05_RS23370 PF00378 Enoyl-CoA hydratase/isomerase CQB05_RS23375 PF02515 CoA-transferase family III CQB05_RS23380 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS23390 PF01012 Electron transfer flavoprotein domain CQB05_RS23395 PF01012 Electron transfer flavoprotein domain CQB05_RS23395 PF00766 Electron transfer flavoprotein FAD-binding domain CQB05_RS23400 PF00596 Class II Aldolase and Adducin N-terminal domain CQB05_RS23405 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS23410 PF02203 Tar ligand binding domain homologue CQB05_RS23410 PF00672 HAMP domain CQB05_RS23410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS23425 PF03706 Lysylphosphatidylglycerol synthase TM region CQB05_RS23430 PF13091 PLD-like domain CQB05_RS23435 PF03372 Endonuclease/Exonuclease/phosphatase family CQB05_RS23440 PF00291 Pyridoxal-phosphate dependent enzyme CQB05_RS23450 PF00027 Cyclic nucleotide-binding domain CQB05_RS23450 PF13545 Crp-like helix-turn-helix domain CQB05_RS23455 PF00672 HAMP domain CQB05_RS23455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQB05_RS23455 PF02203 Tar ligand binding domain homologue CQB05_RS23465 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS23465 PF00563 EAL domain CQB05_RS23465 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS23470 PF01479 S4 domain CQB05_RS23470 PF00849 RNA pseudouridylate synthase CQB05_RS23485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS23485 PF00183 Hsp90 protein CQB05_RS23520 PF00072 Response regulator receiver domain CQB05_RS23520 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS23520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS23520 PF00672 HAMP domain CQB05_RS23520 PF17149 Periplasmic sensor domain found in signal transduction proteins CQB05_RS23520 PF01627 Hpt domain CQB05_RS23525 PF01547 Bacterial extracellular solute-binding protein CQB05_RS23535 PF00072 Response regulator receiver domain CQB05_RS23535 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS23540 PF01636 Phosphotransferase enzyme family CQB05_RS23545 PF03793 PASTA domain CQB05_RS23545 PF00069 Protein kinase domain CQB05_RS23555 PF02566 OsmC-like protein CQB05_RS23560 PF01047 MarR family CQB05_RS23565 PF03328 HpcH/HpaI aldolase/citrate lyase family CQB05_RS23570 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQB05_RS23575 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQB05_RS23580 PF04909 Amidohydrolase CQB05_RS23585 PF01042 Endoribonuclease L-PSP CQB05_RS23590 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS23600 PF01613 Flavin reductase like domain CQB05_RS23605 PF09339 IclR helix-turn-helix domain CQB05_RS23605 PF01614 Bacterial transcriptional regulator CQB05_RS23610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQB05_RS23610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQB05_RS23615 PF01061 ABC-2 type transporter CQB05_RS23620 PF00005 ABC transporter CQB05_RS23625 PF02222 ATP-grasp domain CQB05_RS23630 PF00082 Subtilase family CQB05_RS23650 PF00356 Bacterial regulatory proteins, lacI family CQB05_RS23655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQB05_RS23655 PF00391 PEP-utilising enzyme, mobile domain CQB05_RS23655 PF02896 PEP-utilising enzyme, TIM barrel domain CQB05_RS23655 PF05524 PEP-utilising enzyme, N-terminal CQB05_RS23655 PF00381 PTS HPr component phosphorylation site CQB05_RS23665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQB05_RS23680 PF05230 MASE2 domain CQB05_RS23680 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS23685 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CQB05_RS23685 PF01048 Phosphorylase superfamily CQB05_RS23690 PF00271 Helicase conserved C-terminal domain CQB05_RS23690 PF00270 DEAD/DEAH box helicase CQB05_RS23690 PF03880 DbpA RNA binding domain CQB05_RS23695 PF01545 Cation efflux family CQB05_RS23695 PF16916 Dimerisation domain of Zinc Transporter CQB05_RS23700 PF02580 D-Tyr-tRNA(Tyr) deacylase CQB05_RS23705 PF02130 Uncharacterized protein family UPF0054 CQB05_RS23710 PF02562 PhoH-like protein CQB05_RS23715 PF07499 RuvA, C-terminal domain CQB05_RS23715 PF01330 RuvA N terminal domain CQB05_RS23730 PF05491 RuvB C-terminal winged helix domain CQB05_RS23730 PF05496 Holliday junction DNA helicase RuvB P-loop domain CQB05_RS23730 PF17864 RuvB AAA lid domain CQB05_RS23745 PF14031 Putative serine dehydratase domain CQB05_RS23745 PF01168 Alanine racemase, N-terminal domain CQB05_RS23750 PF00300 Histidine phosphatase superfamily (branch 1) CQB05_RS23760 PF01171 PP-loop family CQB05_RS23765 PF07730 Histidine kinase CQB05_RS23765 PF17200 Single Cache domain 2 CQB05_RS23770 PF00072 Response regulator receiver domain CQB05_RS23770 PF00196 Bacterial regulatory proteins, luxR family CQB05_RS23775 PF13722 5TM C-terminal transporter carbon starvation CstA CQB05_RS23775 PF02554 Carbon starvation protein CstA CQB05_RS23780 PF04328 Selenoprotein, putative CQB05_RS23805 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQB05_RS23810 PF00282 Pyridoxal-dependent decarboxylase conserved domain CQB05_RS23815 PF00202 Aminotransferase class-III CQB05_RS23820 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CQB05_RS23825 PF00583 Acetyltransferase (GNAT) family CQB05_RS23835 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS23835 PF00501 AMP-binding enzyme CQB05_RS23835 PF00550 Phosphopantetheine attachment site CQB05_RS23835 PF00668 Condensation domain CQB05_RS23860 PF00982 Glycosyltransferase family 20 CQB05_RS23865 PF00723 Glycosyl hydrolases family 15 CQB05_RS23875 PF02358 Trehalose-phosphatase CQB05_RS23880 PF00085 Thioredoxin CQB05_RS23885 PF01743 Poly A polymerase head domain CQB05_RS23885 PF12627 Probable RNA and SrmB- binding site of polymerase A CQB05_RS23885 PF01966 HD domain CQB05_RS23895 PF13417 Glutathione S-transferase, N-terminal domain CQB05_RS23895 PF00043 Glutathione S-transferase, C-terminal domain CQB05_RS23900 PF00563 EAL domain CQB05_RS23900 PF00990 Diguanylate cyclase, GGDEF domain CQB05_RS23900 PF03707 Bacterial signalling protein N terminal repeat CQB05_RS23905 PF01812 5-formyltetrahydrofolate cyclo-ligase family CQB05_RS23910 PF01551 Peptidase family M23 CQB05_RS23910 PF01464 Transglycosylase SLT domain CQB05_RS23910 PF10145 Phage-related minor tail protein CQB05_RS23925 PF05025 RbsD / FucU transport protein family CQB05_RS23930 PF00294 pfkB family carbohydrate kinase CQB05_RS23935 PF00356 Bacterial regulatory proteins, lacI family CQB05_RS23940 PF02653 Branched-chain amino acid transport system / permease component CQB05_RS23945 PF00005 ABC transporter CQB05_RS23950 PF13407 Periplasmic binding protein domain CQB05_RS23955 PF13193 AMP-binding enzyme C-terminal domain CQB05_RS23955 PF00501 AMP-binding enzyme CQB05_RS23965 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CQB05_RS23970 PF03401 Tripartite tricarboxylate transporter family receptor CQB05_RS23975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQB05_RS23985 PF00561 alpha/beta hydrolase fold CQB05_RS23990 PF01037 Lrp/AsnC ligand binding domain CQB05_RS24000 PF00571 CBS domain CQB05_RS24000 PF03471 Transporter associated domain CQB05_RS24005 PF00795 Carbon-nitrogen hydrolase CQB05_RS24010 PF03466 LysR substrate binding domain CQB05_RS24010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQB05_RS24015 PF00710 Asparaginase, N-terminal CQB05_RS24015 PF17763 Glutaminase/Asparaginase C-terminal domain CQB05_RS24020 PF07977 FabA-like domain CQB05_RS24025 PF02801 Beta-ketoacyl synthase, C-terminal domain CQB05_RS24025 PF00109 Beta-ketoacyl synthase, N-terminal domain CQB05_RS24030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQB05_RS24035 PF02091 Glycyl-tRNA synthetase alpha subunit CQB05_RS24040 PF05746 DALR anticodon binding domain CQB05_RS24040 PF02092 Glycyl-tRNA synthetase beta subunit CQB05_RS24055 PF01553 Acyltransferase CQB05_RS24075 PF01476 LysM domain CQB05_RS24075 PF04972 BON domain CQB05_RS24080 PF03309 Type III pantothenate kinase CQB05_RS24095 PF16363 GDP-mannose 4,6 dehydratase CQB05_RS24100 PF04321 RmlD substrate binding domain CQB05_RS24105 PF00483 Nucleotidyl transferase CQB05_RS24110 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CQB05_RS24120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQB05_RS24120 PF00437 Type II/IV secretion system protein CQB05_RS24125 PF00482 Type II secretion system (T2SS), protein F CQB05_RS24130 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS24130 PF08334 Type II secretion system (T2SS), protein G CQB05_RS24135 PF12019 Type II transport protein GspH CQB05_RS24140 PF07963 Prokaryotic N-terminal methylation motif CQB05_RS24170 PF00263 Bacterial type II and III secretion system protein CQB05_RS24170 PF03958 Bacterial type II/III secretion system short domain CQB05_RS24195 PF00005 ABC transporter CQB05_RS24225 PF00696 Amino acid kinase family CQB05_RS24230 PF00486 Transcriptional regulatory protein, C terminal CQB05_RS24230 PF00072 Response regulator receiver domain CQB05_RS24235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQB05_RS24235 PF00512 His Kinase A (phospho-acceptor) domain CQB05_RS24240 PF00440 Bacterial regulatory proteins, tetR family