locus-tag class description APS58_RS00010 PF00710 Asparaginase, N-terminal APS58_RS00010 PF17763 Glutaminase/Asparaginase C-terminal domain APS58_RS00015 PF00717 Peptidase S24-like APS58_RS00015 PF01726 LexA DNA binding domain APS58_RS00025 PF00270 DEAD/DEAH box helicase APS58_RS00025 PF11898 Domain of unknown function (DUF3418) APS58_RS00025 PF04408 Helicase associated domain (HA2) APS58_RS00025 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold APS58_RS00025 PF00271 Helicase conserved C-terminal domain APS58_RS00035 PF01266 FAD dependent oxidoreductase APS58_RS00040 PF00696 Amino acid kinase family APS58_RS00040 PF00583 Acetyltransferase (GNAT) family APS58_RS00050 PF03466 LysR substrate binding domain APS58_RS00050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS00055 PF00581 Rhodanese-like domain APS58_RS00055 PF17773 UPF0176 acylphosphatase like domain APS58_RS00060 PF02600 Disulfide bond formation protein DsbB APS58_RS00065 PF00005 ABC transporter APS58_RS00065 PF17850 CysA C-terminal regulatory domain APS58_RS00065 PF12857 TOBE-like domain APS58_RS00070 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS00075 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS00095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS00095 PF03466 LysR substrate binding domain APS58_RS00100 PF02525 Flavodoxin-like fold APS58_RS00105 PF03358 NADPH-dependent FMN reductase APS58_RS00110 PF03180 NLPA lipoprotein APS58_RS00115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS00115 PF00672 HAMP domain APS58_RS00115 PF02203 Tar ligand binding domain homologue APS58_RS00120 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS00125 PF00005 ABC transporter APS58_RS00125 PF09383 NIL domain APS58_RS00130 PF00072 Response regulator receiver domain APS58_RS00130 PF13188 PAS domain APS58_RS00130 PF08448 PAS fold APS58_RS00130 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS00135 PF07690 Major Facilitator Superfamily APS58_RS00140 PF03466 LysR substrate binding domain APS58_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS00145 PF01451 Low molecular weight phosphotyrosine protein phosphatase APS58_RS00155 PF02321 Outer membrane efflux protein APS58_RS00160 PF00873 AcrB/AcrD/AcrF family APS58_RS00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS00165 PF00529 HlyD membrane-fusion protein of T1SS APS58_RS00170 PF00486 Transcriptional regulatory protein, C terminal APS58_RS00170 PF00072 Response regulator receiver domain APS58_RS00175 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS00175 PF18698 Histidine kinase sensor domain APS58_RS00175 PF00989 PAS fold APS58_RS00175 PF00672 HAMP domain APS58_RS00250 PF02735 Ku70/Ku80 beta-barrel domain APS58_RS00255 PF04679 ATP dependent DNA ligase C terminal region APS58_RS00255 PF01068 ATP dependent DNA ligase domain APS58_RS00255 PF13298 DNA polymerase Ligase (LigD) APS58_RS00260 PF04055 Radical SAM superfamily APS58_RS00260 PF06968 Biotin and Thiamin Synthesis associated domain APS58_RS00280 PF02785 Biotin carboxylase C-terminal domain APS58_RS00280 PF00289 Biotin carboxylase, N-terminal domain APS58_RS00280 PF00364 Biotin-requiring enzyme APS58_RS00280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS58_RS00280 PF18140 Propionyl-coenzyme A carboxylase BT domain APS58_RS00290 PF01039 Carboxyl transferase domain APS58_RS00305 PF01642 Methylmalonyl-CoA mutase APS58_RS00305 PF02310 B12 binding domain APS58_RS00310 PF00392 Bacterial regulatory proteins, gntR family APS58_RS00310 PF07729 FCD domain APS58_RS00320 PF00873 AcrB/AcrD/AcrF family APS58_RS00325 PF00529 HlyD membrane-fusion protein of T1SS APS58_RS00325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS00330 PF02321 Outer membrane efflux protein APS58_RS00370 PF00072 Response regulator receiver domain APS58_RS00370 PF00196 Bacterial regulatory proteins, luxR family APS58_RS00375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS00375 PF00672 HAMP domain APS58_RS00375 PF02203 Tar ligand binding domain homologue APS58_RS00390 PF05598 Transposase domain (DUF772) APS58_RS00390 PF01609 Transposase DDE domain APS58_RS00405 PF01207 Dihydrouridine synthase (Dus) APS58_RS00410 PF00563 EAL domain APS58_RS00410 PF03707 Bacterial signalling protein N terminal repeat APS58_RS00410 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS00425 PF04060 Putative Fe-S cluster APS58_RS00430 PF02203 Tar ligand binding domain homologue APS58_RS00430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS00430 PF00672 HAMP domain APS58_RS00435 PF00155 Aminotransferase class I and II APS58_RS00440 PF14602 Hexapeptide repeat of succinyl-transferase APS58_RS00440 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APS58_RS00445 PF00437 Type II/IV secretion system protein APS58_RS00450 PF01546 Peptidase family M20/M25/M40 APS58_RS00450 PF07687 Peptidase dimerisation domain APS58_RS00455 PF05175 Methyltransferase small domain APS58_RS00460 PF12848 ABC transporter APS58_RS00460 PF00005 ABC transporter APS58_RS00465 PF00106 short chain dehydrogenase APS58_RS00470 PF02803 Thiolase, C-terminal domain APS58_RS00470 PF00108 Thiolase, N-terminal domain APS58_RS00475 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus APS58_RS00485 PF02578 Multi-copper polyphenol oxidoreductase laccase APS58_RS00490 PF13417 Glutathione S-transferase, N-terminal domain APS58_RS00495 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS58_RS00505 PF00069 Protein kinase domain APS58_RS00510 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS00515 PF00912 Transglycosylase APS58_RS00515 PF00905 Penicillin binding protein transpeptidase domain APS58_RS00520 PF10672 S-adenosylmethionine-dependent methyltransferase APS58_RS00520 PF17785 PUA-like domain APS58_RS00535 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS00545 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS00545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS58_RS00550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS58_RS00550 PF00364 Biotin-requiring enzyme APS58_RS00550 PF02817 e3 binding domain APS58_RS00555 PF00456 Transketolase, thiamine diphosphate binding domain APS58_RS00555 PF17831 Pyruvate dehydrogenase E1 component middle domain APS58_RS00560 PF00989 PAS fold APS58_RS00560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS00560 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS00565 PF00072 Response regulator receiver domain APS58_RS00565 PF00196 Bacterial regulatory proteins, luxR family APS58_RS00570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APS58_RS00570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APS58_RS00575 PF01432 Peptidase family M3 APS58_RS00585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APS58_RS00590 PF01180 Dihydroorotate dehydrogenase APS58_RS00610 PF01266 FAD dependent oxidoreductase APS58_RS00615 PF00850 Histone deacetylase domain APS58_RS00630 PF00929 Exonuclease APS58_RS00635 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS00640 PF00012 Hsp70 protein APS58_RS00645 PF07743 HSCB C-terminal oligomerisation domain APS58_RS00650 PF01521 Iron-sulphur cluster biosynthesis APS58_RS00655 PF01592 NifU-like N terminal domain APS58_RS00660 PF00266 Aminotransferase class-V APS58_RS00665 PF02082 Transcriptional regulator APS58_RS00670 PF00271 Helicase conserved C-terminal domain APS58_RS00670 PF04851 Type III restriction enzyme, res subunit APS58_RS00670 PF12344 Ultra-violet resistance protein B APS58_RS00670 PF02151 UvrB/uvrC motif APS58_RS00670 PF17757 UvrB interaction domain APS58_RS00675 PF00155 Aminotransferase class I and II APS58_RS00680 PF02515 CoA-transferase family III APS58_RS00690 PF11842 Domain of unknown function (DUF3362) APS58_RS00690 PF04055 Radical SAM superfamily APS58_RS00690 PF08497 Radical SAM N-terminal APS58_RS00695 PF02203 Tar ligand binding domain homologue APS58_RS00695 PF00672 HAMP domain APS58_RS00695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS00705 PF00127 Copper binding proteins, plastocyanin/azurin family APS58_RS00710 PF09186 Domain of unknown function (DUF1949) APS58_RS00710 PF01205 Uncharacterized protein family UPF0029 APS58_RS00715 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS00715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS58_RS00725 PF01266 FAD dependent oxidoreductase APS58_RS00730 PF01425 Amidase APS58_RS00735 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS00740 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS00745 PF03466 LysR substrate binding domain APS58_RS00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS00775 PF01479 S4 domain APS58_RS00785 PF03705 CheR methyltransferase, all-alpha domain APS58_RS00785 PF08448 PAS fold APS58_RS00785 PF01339 CheB methylesterase APS58_RS00785 PF01739 CheR methyltransferase, SAM binding domain APS58_RS00845 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS00850 PF00850 Histone deacetylase domain APS58_RS00855 PF17863 AAA lid domain APS58_RS00855 PF07726 ATPase family associated with various cellular activities (AAA) APS58_RS00865 PF01841 Transglutaminase-like superfamily APS58_RS00865 PF13559 Domain of unknown function (DUF4129) APS58_RS00865 PF11992 Domain of unknown function (DUF3488) APS58_RS00870 PF13406 Transglycosylase SLT domain APS58_RS00880 PF07690 Major Facilitator Superfamily APS58_RS00900 PF13458 Periplasmic binding protein APS58_RS00915 PF00814 Glycoprotease family APS58_RS00920 PF13458 Periplasmic binding protein APS58_RS00925 PF03861 ANTAR domain APS58_RS00925 PF00072 Response regulator receiver domain APS58_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS00945 PF00005 ABC transporter APS58_RS00950 PF01872 RibD C-terminal domain APS58_RS00965 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) APS58_RS00975 PF01053 Cys/Met metabolism PLP-dependent enzyme APS58_RS00985 PF00106 short chain dehydrogenase APS58_RS00990 PF07722 Peptidase C26 APS58_RS01005 PF00625 Guanylate kinase APS58_RS01010 PF02779 Transketolase, pyrimidine binding domain APS58_RS01010 PF02780 Transketolase, C-terminal domain APS58_RS01015 PF00456 Transketolase, thiamine diphosphate binding domain APS58_RS01020 PF07690 Major Facilitator Superfamily APS58_RS01035 PF00072 Response regulator receiver domain APS58_RS01045 PF16591 Helical bimodular sensor domain APS58_RS01045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS01045 PF00672 HAMP domain APS58_RS01050 PF01584 CheW-like domain APS58_RS01050 PF02895 Signal transducing histidine kinase, homodimeric domain APS58_RS01050 PF01627 Hpt domain APS58_RS01050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS01050 PF07194 P2 response regulator binding domain APS58_RS01055 PF02463 RecF/RecN/SMC N terminal domain APS58_RS01065 PF01204 Trehalase APS58_RS01070 PF00571 CBS domain APS58_RS01070 PF00478 IMP dehydrogenase / GMP reductase domain APS58_RS01075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS01075 PF08447 PAS fold APS58_RS01080 PF00529 HlyD membrane-fusion protein of T1SS APS58_RS01080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS01085 PF00873 AcrB/AcrD/AcrF family APS58_RS01090 PF02321 Outer membrane efflux protein APS58_RS01100 PF00672 HAMP domain APS58_RS01100 PF02203 Tar ligand binding domain homologue APS58_RS01100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS01105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS58_RS01105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS58_RS01105 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS01105 PF18267 Rubredoxin NAD+ reductase C-terminal domain APS58_RS01105 PF04324 BFD-like [2Fe-2S] binding domain APS58_RS01110 PF00355 Rieske [2Fe-2S] domain APS58_RS01115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS58_RS01115 PF01568 Molydopterin dinucleotide binding domain APS58_RS01115 PF00384 Molybdopterin oxidoreductase APS58_RS01120 PF02885 Glycosyl transferase family, helical bundle domain APS58_RS01120 PF00591 Glycosyl transferase family, a/b domain APS58_RS01125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS58_RS01130 PF00150 Cellulase (glycosyl hydrolase family 5) APS58_RS01130 PF00553 Cellulose binding domain APS58_RS01135 PF03061 Thioesterase superfamily APS58_RS01140 PF00484 Carbonic anhydrase APS58_RS01180 PF01165 Ribosomal protein S21 APS58_RS01185 PF09424 Yqey-like protein APS58_RS01190 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS01190 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS01200 PF03466 LysR substrate binding domain APS58_RS01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS01205 PF00180 Isocitrate/isopropylmalate dehydrogenase APS58_RS01210 PF01734 Patatin-like phospholipase APS58_RS01215 PF07690 Major Facilitator Superfamily APS58_RS01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS01220 PF03466 LysR substrate binding domain APS58_RS01225 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS01230 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APS58_RS01230 PF08666 SAF domain APS58_RS01235 PF00171 Aldehyde dehydrogenase family APS58_RS01240 PF03328 HpcH/HpaI aldolase/citrate lyase family APS58_RS01245 PF01523 Putative modulator of DNA gyrase APS58_RS01250 PF04751 Protein of unknown function (DUF615) APS58_RS01255 PF00994 Probable molybdopterin binding domain APS58_RS01260 PF00132 Bacterial transferase hexapeptide (six repeats) APS58_RS01265 PF00588 SpoU rRNA Methylase family APS58_RS01275 PF00005 ABC transporter APS58_RS01290 PF00459 Inositol monophosphatase family APS58_RS01305 PF00005 ABC transporter APS58_RS01315 PF00072 Response regulator receiver domain APS58_RS01320 PF00072 Response regulator receiver domain APS58_RS01320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS58_RS01320 PF00672 HAMP domain APS58_RS01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS01320 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS01320 PF01627 Hpt domain APS58_RS01365 PF00593 TonB dependent receptor APS58_RS01365 PF07715 TonB-dependent Receptor Plug Domain APS58_RS01375 PF01624 MutS domain I APS58_RS01375 PF05188 MutS domain II APS58_RS01375 PF05192 MutS domain III APS58_RS01375 PF00488 MutS domain V APS58_RS01375 PF05190 MutS family domain IV APS58_RS01395 PF05593 RHS Repeat APS58_RS01395 PF14220 Domain of unknown function (DUF4329) APS58_RS01395 PF03527 RHS protein APS58_RS01400 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS01400 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS01420 PF13426 PAS domain APS58_RS01420 PF08448 PAS fold APS58_RS01420 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS01420 PF05231 MASE1 APS58_RS01420 PF08447 PAS fold APS58_RS01420 PF00563 EAL domain APS58_RS01425 PF02673 Bacitracin resistance protein BacA APS58_RS01430 PF02321 Outer membrane efflux protein APS58_RS01435 PF00873 AcrB/AcrD/AcrF family APS58_RS01450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS01460 PF07694 5TMR of 5TMR-LYT APS58_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS01460 PF06580 Histidine kinase APS58_RS01465 PF00072 Response regulator receiver domain APS58_RS01465 PF04397 LytTr DNA-binding domain APS58_RS01470 PF01810 LysE type translocator APS58_RS01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS01490 PF03459 TOBE domain APS58_RS01505 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS01510 PF00005 ABC transporter APS58_RS01510 PF03459 TOBE domain APS58_RS01515 PF02028 BCCT, betaine/carnitine/choline family transporter APS58_RS01520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS58_RS01520 PF02806 Alpha amylase, C-terminal all-beta domain APS58_RS01520 PF00128 Alpha amylase, catalytic domain APS58_RS01525 PF00128 Alpha amylase, catalytic domain APS58_RS01525 PF11896 Domain of unknown function (DUF3416) APS58_RS01530 PF16657 Maltogenic Amylase, C-terminal domain APS58_RS01530 PF00128 Alpha amylase, catalytic domain APS58_RS01535 PF05552 Conserved TM helix APS58_RS01545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS58_RS01555 PF03480 Bacterial extracellular solute-binding protein, family 7 APS58_RS01560 PF02780 Transketolase, C-terminal domain APS58_RS01560 PF02779 Transketolase, pyrimidine binding domain APS58_RS01560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APS58_RS01565 PF00348 Polyprenyl synthetase APS58_RS01570 PF02609 Exonuclease VII small subunit APS58_RS01575 PF00355 Rieske [2Fe-2S] domain APS58_RS01575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) APS58_RS01585 PF00581 Rhodanese-like domain APS58_RS01590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS01590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS01595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS01595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS01595 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS01605 PF05247 Flagellar transcriptional activator (FlhD) APS58_RS01610 PF05280 Flagellar transcriptional activator (FlhC) APS58_RS01625 PF01594 AI-2E family transporter APS58_RS01635 PF00311 Phosphoenolpyruvate carboxylase APS58_RS01640 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APS58_RS01640 PF03900 Porphobilinogen deaminase, C-terminal domain APS58_RS01660 PF00005 ABC transporter APS58_RS01660 PF12848 ABC transporter APS58_RS01670 PF01435 Peptidase family M48 APS58_RS01675 PF00133 tRNA synthetases class I (I, L, M and V) APS58_RS01675 PF10458 Valyl tRNA synthetase tRNA binding arm APS58_RS01675 PF08264 Anticodon-binding domain of tRNA APS58_RS01680 PF00483 Nucleotidyl transferase APS58_RS01690 PF01206 Sulfurtransferase TusA APS58_RS01695 PF09297 NADH pyrophosphatase zinc ribbon domain APS58_RS01695 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain APS58_RS01695 PF00293 NUDIX domain APS58_RS01700 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS01735 PF03466 LysR substrate binding domain APS58_RS01735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS01740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS01740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS01740 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS01745 PF02515 CoA-transferase family III APS58_RS01765 PF00175 Oxidoreductase NAD-binding domain APS58_RS01765 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS01765 PF00970 Oxidoreductase FAD-binding domain APS58_RS01775 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS01780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APS58_RS01785 PF12627 Probable RNA and SrmB- binding site of polymerase A APS58_RS01785 PF01743 Poly A polymerase head domain APS58_RS01785 PF12626 Polymerase A arginine-rich C-terminus APS58_RS01795 PF00308 Bacterial dnaA protein APS58_RS01800 PF02769 AIR synthase related protein, C-terminal domain APS58_RS01800 PF00586 AIR synthase related protein, N-terminal domain APS58_RS01815 PF01965 DJ-1/PfpI family APS58_RS01820 PF01965 DJ-1/PfpI family APS58_RS01830 PF00817 impB/mucB/samB family APS58_RS01830 PF11799 impB/mucB/samB family C-terminal domain APS58_RS01850 PF00672 HAMP domain APS58_RS01850 PF02203 Tar ligand binding domain homologue APS58_RS01850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS01855 PF01070 FMN-dependent dehydrogenase APS58_RS01865 PF00912 Transglycosylase APS58_RS01865 PF14814 Bifunctional transglycosylase second domain APS58_RS01865 PF00905 Penicillin binding protein transpeptidase domain APS58_RS01870 PF00672 HAMP domain APS58_RS01870 PF02203 Tar ligand binding domain homologue APS58_RS01870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS01900 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS01905 PF14698 Argininosuccinate lyase C-terminal APS58_RS01905 PF00206 Lyase APS58_RS01910 PF07694 5TMR of 5TMR-LYT APS58_RS01910 PF06580 Histidine kinase APS58_RS01915 PF04397 LytTr DNA-binding domain APS58_RS01915 PF00072 Response regulator receiver domain APS58_RS01920 PF14698 Argininosuccinate lyase C-terminal APS58_RS01920 PF00206 Lyase APS58_RS01930 PF01738 Dienelactone hydrolase family APS58_RS01960 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS01965 PF01266 FAD dependent oxidoreductase APS58_RS01970 PF03466 LysR substrate binding domain APS58_RS01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS01995 PF01612 3'-5' exonuclease APS58_RS01995 PF01367 5'-3' exonuclease, C-terminal SAM fold APS58_RS01995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APS58_RS01995 PF00476 DNA polymerase family A APS58_RS02005 PF01636 Phosphotransferase enzyme family APS58_RS02065 PF00580 UvrD/REP helicase N-terminal domain APS58_RS02065 PF13361 UvrD-like helicase C-terminal domain APS58_RS02075 PF07687 Peptidase dimerisation domain APS58_RS02075 PF01546 Peptidase family M20/M25/M40 APS58_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS02090 PF00478 IMP dehydrogenase / GMP reductase domain APS58_RS02140 PF00072 Response regulator receiver domain APS58_RS02140 PF00158 Sigma-54 interaction domain APS58_RS02140 PF02954 Bacterial regulatory protein, Fis family APS58_RS02145 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS02145 PF16736 Single Cache-like APS58_RS02145 PF00989 PAS fold APS58_RS02150 PF00309 Sigma-54 factor, Activator interacting domain (AID) APS58_RS02150 PF04963 Sigma-54 factor, core binding domain APS58_RS02150 PF04552 Sigma-54, DNA binding domain APS58_RS02165 PF07690 Major Facilitator Superfamily APS58_RS02170 PF08447 PAS fold APS58_RS02170 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS02170 PF05231 MASE1 APS58_RS02170 PF08448 PAS fold APS58_RS02170 PF13426 PAS domain APS58_RS02170 PF00563 EAL domain APS58_RS02175 PF00271 Helicase conserved C-terminal domain APS58_RS02175 PF00270 DEAD/DEAH box helicase APS58_RS02180 PF00929 Exonuclease APS58_RS02185 PF01435 Peptidase family M48 APS58_RS02190 PF01329 Pterin 4 alpha carbinolamine dehydratase APS58_RS02195 PF03193 RsgA GTPase APS58_RS02200 PF17113 Regulatory signalling modulator protein AmpE APS58_RS02200 PF03186 CobD/Cbib protein APS58_RS02205 PF00293 NUDIX domain APS58_RS02210 PF01245 Ribosomal protein L19 APS58_RS02215 PF01746 tRNA (Guanine-1)-methyltransferase APS58_RS02220 PF05239 PRC-barrel domain APS58_RS02220 PF01782 RimM N-terminal domain APS58_RS02225 PF00886 Ribosomal protein S16 APS58_RS02240 PF01384 Phosphate transporter family APS58_RS02245 PF01865 Protein of unknown function DUF47 APS58_RS02250 PF01389 OmpA-like transmembrane domain APS58_RS02250 PF00691 OmpA family APS58_RS02255 PF00005 ABC transporter APS58_RS02260 PF00005 ABC transporter APS58_RS02260 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS02265 PF11862 Domain of unknown function (DUF3382) APS58_RS02265 PF02653 Branched-chain amino acid transport system / permease component APS58_RS02270 PF02653 Branched-chain amino acid transport system / permease component APS58_RS02275 PF02203 Tar ligand binding domain homologue APS58_RS02275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS02275 PF00672 HAMP domain APS58_RS02280 PF16193 AAA C-terminal domain APS58_RS02280 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS02280 PF12002 MgsA AAA+ ATPase C terminal APS58_RS02285 PF03167 Uracil DNA glycosylase superfamily APS58_RS02300 PF03548 Outer membrane lipoprotein carrier protein LolA APS58_RS02305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APS58_RS02305 PF01580 FtsK/SpoIIIE family APS58_RS02305 PF17854 FtsK alpha domain APS58_RS02305 PF09397 Ftsk gamma domain APS58_RS02310 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS02315 PF00830 Ribosomal L28 family APS58_RS02320 PF00471 Ribosomal protein L33 APS58_RS02325 PF00392 Bacterial regulatory proteins, gntR family APS58_RS02325 PF00155 Aminotransferase class I and II APS58_RS02340 PF01029 NusB family APS58_RS02340 PF01189 16S rRNA methyltransferase RsmB/F APS58_RS02345 PF00544 Pectate lyase APS58_RS02360 PF00551 Formyl transferase APS58_RS02365 PF04337 Protein of unknown function, DUF480 APS58_RS02370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS02370 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS02370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS02375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS02375 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS02375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS02385 PF00041 Fibronectin type III domain APS58_RS02385 PF00553 Cellulose binding domain APS58_RS02385 PF00704 Glycosyl hydrolases family 18 APS58_RS02395 PF00672 HAMP domain APS58_RS02395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS02395 PF02203 Tar ligand binding domain homologue APS58_RS02400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS58_RS02410 PF03480 Bacterial extracellular solute-binding protein, family 7 APS58_RS02420 PF01687 Riboflavin kinase APS58_RS02420 PF06574 FAD synthetase APS58_RS02425 PF08264 Anticodon-binding domain of tRNA APS58_RS02425 PF00133 tRNA synthetases class I (I, L, M and V) APS58_RS02425 PF06827 Zinc finger found in FPG and IleRS APS58_RS02430 PF01252 Signal peptidase (SPase) II APS58_RS02440 PF00356 Bacterial regulatory proteins, lacI family APS58_RS02450 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS02455 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS02460 PF00005 ABC transporter APS58_RS02460 PF08402 TOBE domain APS58_RS02465 PF00149 Calcineurin-like phosphoesterase APS58_RS02475 PF02690 Na+/Pi-cotransporter APS58_RS02490 PF03466 LysR substrate binding domain APS58_RS02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS02505 PF13593 SBF-like CPA transporter family (DUF4137) APS58_RS02520 PF08240 Alcohol dehydrogenase GroES-like domain APS58_RS02520 PF00107 Zinc-binding dehydrogenase APS58_RS02525 PF00892 EamA-like transporter family APS58_RS02595 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS02595 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS02600 PF00563 EAL domain APS58_RS02600 PF03707 Bacterial signalling protein N terminal repeat APS58_RS02600 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS02615 PF00781 Diacylglycerol kinase catalytic domain APS58_RS02625 PF07690 Major Facilitator Superfamily APS58_RS02645 PF00005 ABC transporter APS58_RS02650 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS02650 PF00005 ABC transporter APS58_RS02655 PF02653 Branched-chain amino acid transport system / permease component APS58_RS02665 PF02653 Branched-chain amino acid transport system / permease component APS58_RS02670 PF13458 Periplasmic binding protein APS58_RS02675 PF00375 Sodium:dicarboxylate symporter family APS58_RS02700 PF01292 Prokaryotic cytochrome b561 APS58_RS02715 PF02785 Biotin carboxylase C-terminal domain APS58_RS02715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS58_RS02715 PF00364 Biotin-requiring enzyme APS58_RS02715 PF00289 Biotin carboxylase, N-terminal domain APS58_RS02720 PF02682 Carboxyltransferase domain, subdomain C and D APS58_RS02725 PF07286 Protein of unknown function (DUF1445) APS58_RS02730 PF03746 LamB/YcsF family APS58_RS02735 PF07690 Major Facilitator Superfamily APS58_RS02750 PF01494 FAD binding domain APS58_RS02755 PF00672 HAMP domain APS58_RS02755 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS02755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS02760 PF01070 FMN-dependent dehydrogenase APS58_RS02785 PF08447 PAS fold APS58_RS02785 PF00563 EAL domain APS58_RS02785 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS02785 PF08448 PAS fold APS58_RS02790 PF00072 Response regulator receiver domain APS58_RS02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS02795 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS02795 PF00072 Response regulator receiver domain APS58_RS02795 PF01627 Hpt domain APS58_RS02800 PF00547 Urease, gamma subunit APS58_RS02810 PF00699 Urease beta subunit APS58_RS02815 PF00449 Urease alpha-subunit, N-terminal domain APS58_RS02815 PF01979 Amidohydrolase family APS58_RS02825 PF02814 UreE urease accessory protein, N-terminal domain APS58_RS02825 PF05194 UreE urease accessory protein, C-terminal domain APS58_RS02830 PF01730 UreF APS58_RS02835 PF02492 CobW/HypB/UreG, nucleotide-binding domain APS58_RS02850 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS02875 PF02525 Flavodoxin-like fold APS58_RS02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS02880 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS02905 PF01739 CheR methyltransferase, SAM binding domain APS58_RS02905 PF03705 CheR methyltransferase, all-alpha domain APS58_RS02915 PF00072 Response regulator receiver domain APS58_RS02915 PF01339 CheB methylesterase APS58_RS02920 PF14245 Type IV pilin PilA APS58_RS02920 PF07963 Prokaryotic N-terminal methylation motif APS58_RS02925 PF07963 Prokaryotic N-terminal methylation motif APS58_RS02925 PF14245 Type IV pilin PilA APS58_RS02930 PF05567 Neisseria PilC beta-propeller domain APS58_RS02950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS58_RS02950 PF01872 RibD C-terminal domain APS58_RS02960 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS58_RS02995 PF00072 Response regulator receiver domain APS58_RS02995 PF13426 PAS domain APS58_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS03025 PF04542 Sigma-70 region 2 APS58_RS03025 PF04545 Sigma-70, region 4 APS58_RS03045 PF00106 short chain dehydrogenase APS58_RS03060 PF04055 Radical SAM superfamily APS58_RS03060 PF06969 HemN C-terminal domain APS58_RS03065 PF01725 Ham1 family APS58_RS03070 PF03725 3' exoribonuclease family, domain 2 APS58_RS03070 PF01138 3' exoribonuclease family, domain 1 APS58_RS03080 PF00069 Protein kinase domain APS58_RS03080 PF03793 PASTA domain APS58_RS03085 PF08340 Domain of unknown function (DUF1732) APS58_RS03085 PF03755 YicC-like family, N-terminal region APS58_RS03090 PF00625 Guanylate kinase APS58_RS03095 PF01192 RNA polymerase Rpb6 APS58_RS03100 PF02824 TGS domain APS58_RS03100 PF04607 Region found in RelA / SpoT proteins APS58_RS03100 PF13291 ACT domain APS58_RS03105 PF03449 Transcription elongation factor, N-terminal APS58_RS03105 PF01272 Transcription elongation factor, GreA/GreB, C-term APS58_RS03130 PF00553 Cellulose binding domain APS58_RS03130 PF03422 Carbohydrate binding module (family 6) APS58_RS03130 PF00331 Glycosyl hydrolase family 10 APS58_RS03135 PF00196 Bacterial regulatory proteins, luxR family APS58_RS03135 PF00072 Response regulator receiver domain APS58_RS03145 PF01628 HrcA protein C terminal domain APS58_RS03145 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding APS58_RS03150 PF01513 ATP-NAD kinase APS58_RS03155 PF02463 RecF/RecN/SMC N terminal domain APS58_RS03160 PF03668 P-loop ATPase protein family APS58_RS03165 PF14815 NUDIX domain APS58_RS03165 PF00730 HhH-GPD superfamily base excision DNA repair protein APS58_RS03165 PF10576 Iron-sulfur binding domain of endonuclease III APS58_RS03165 PF00633 Helix-hairpin-helix motif APS58_RS03175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APS58_RS03175 PF06827 Zinc finger found in FPG and IleRS APS58_RS03175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APS58_RS03190 PF00288 GHMP kinases N terminal domain APS58_RS03190 PF08544 GHMP kinases C terminal APS58_RS03200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS58_RS03200 PF14572 Phosphoribosyl synthetase-associated domain APS58_RS03205 PF01386 Ribosomal L25p family APS58_RS03205 PF14693 Ribosomal protein TL5, C-terminal domain APS58_RS03210 PF01195 Peptidyl-tRNA hydrolase APS58_RS03215 PF00037 4Fe-4S binding domain APS58_RS03220 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS03225 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS03225 PF12911 N-terminal TM domain of oligopeptide transport permease C APS58_RS03230 PF00005 ABC transporter APS58_RS03230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS58_RS03235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS58_RS03235 PF00005 ABC transporter APS58_RS03245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS58_RS03265 PF13378 Enolase C-terminal domain-like APS58_RS03265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS58_RS03270 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS03275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APS58_RS03275 PF00356 Bacterial regulatory proteins, lacI family APS58_RS03305 PF01227 GTP cyclohydrolase I APS58_RS03310 PF13091 PLD-like domain APS58_RS03320 PF00072 Response regulator receiver domain APS58_RS03325 PF00293 NUDIX domain APS58_RS03335 PF02938 GAD domain APS58_RS03335 PF00152 tRNA synthetases class II (D, K and N) APS58_RS03335 PF01336 OB-fold nucleic acid binding domain APS58_RS03355 PF03109 ABC1 family APS58_RS03370 PF01209 ubiE/COQ5 methyltransferase family APS58_RS03380 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS03395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS58_RS03395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS58_RS03400 PF13416 Bacterial extracellular solute-binding protein APS58_RS03405 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS03410 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS03415 PF00005 ABC transporter APS58_RS03415 PF17912 MalK OB fold domain APS58_RS03425 PF03009 Glycerophosphoryl diester phosphodiesterase family APS58_RS03430 PF00924 Mechanosensitive ion channel APS58_RS03430 PF12794 Mechanosensitive ion channel inner membrane domain 1 APS58_RS03430 PF12795 Mechanosensitive ion channel porin domain APS58_RS03435 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS03470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain APS58_RS03470 PF01488 Shikimate / quinate 5-dehydrogenase APS58_RS03470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain APS58_RS03475 PF00472 RF-1 domain APS58_RS03475 PF03462 PCRF domain APS58_RS03480 PF05175 Methyltransferase small domain APS58_RS03480 PF17827 PrmC N-terminal domain APS58_RS03485 PF00462 Glutaredoxin APS58_RS03490 PF02190 ATP-dependent protease La (LON) substrate-binding domain APS58_RS03490 PF05362 Lon protease (S16) C-terminal proteolytic domain APS58_RS03490 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS03495 PF03471 Transporter associated domain APS58_RS03495 PF01595 Cyclin M transmembrane N-terminal domain APS58_RS03495 PF00571 CBS domain APS58_RS03500 PF01464 Transglycosylase SLT domain APS58_RS03500 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain APS58_RS03505 PF03129 Anticodon binding domain APS58_RS03505 PF04073 Aminoacyl-tRNA editing domain APS58_RS03505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS58_RS03510 PF00293 NUDIX domain APS58_RS03520 PF01018 GTP1/OBG APS58_RS03520 PF01926 50S ribosome-binding GTPase APS58_RS03525 PF01016 Ribosomal L27 protein APS58_RS03530 PF00829 Ribosomal prokaryotic L21 protein APS58_RS03535 PF00348 Polyprenyl synthetase APS58_RS03545 PF07687 Peptidase dimerisation domain APS58_RS03545 PF01546 Peptidase family M20/M25/M40 APS58_RS03550 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS03555 PF03466 LysR substrate binding domain APS58_RS03560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain APS58_RS03560 PF00437 Type II/IV secretion system protein APS58_RS03565 PF00482 Type II secretion system (T2SS), protein F APS58_RS03570 PF06750 Bacterial Peptidase A24 N-terminal domain APS58_RS03570 PF01478 Type IV leader peptidase family APS58_RS03575 PF01121 Dephospho-CoA kinase APS58_RS03580 PF07072 Cell division protein APS58_RS03585 PF03884 DNA gyrase inhibitor YacG APS58_RS03590 PF00293 NUDIX domain APS58_RS03600 PF01960 ArgJ family APS58_RS03605 PF02810 SEC-C motif APS58_RS03605 PF07517 SecA DEAD-like domain APS58_RS03605 PF01043 SecA preprotein cross-linking domain APS58_RS03605 PF07516 SecA Wing and Scaffold domain APS58_RS03610 PF01551 Peptidase family M23 APS58_RS03610 PF08525 Opacity-associated protein A N-terminal motif APS58_RS03610 PF01476 LysM domain APS58_RS03625 PF04386 Stringent starvation protein B APS58_RS03630 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS03630 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS03635 PF02167 Cytochrome C1 family APS58_RS03640 PF00032 Cytochrome b(C-terminal)/b6/petD APS58_RS03640 PF00033 Cytochrome b/b6/petB APS58_RS03645 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal APS58_RS03645 PF00355 Rieske [2Fe-2S] domain APS58_RS03650 PF01741 Large-conductance mechanosensitive channel, MscL APS58_RS03655 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APS58_RS03660 PF00005 ABC transporter APS58_RS03670 PF12704 MacB-like periplasmic core domain APS58_RS03670 PF02687 FtsX-like permease family APS58_RS03680 PF17768 RecJ OB domain APS58_RS03680 PF01368 DHH family APS58_RS03680 PF02272 DHHA1 domain APS58_RS03690 PF00155 Aminotransferase class I and II APS58_RS03695 PF07690 Major Facilitator Superfamily APS58_RS03700 PF02811 PHP domain APS58_RS03705 PF01300 Telomere recombination APS58_RS03715 PF02163 Peptidase family M50 APS58_RS03720 PF00579 tRNA synthetases class I (W and Y) APS58_RS03750 PF13683 Integrase core domain APS58_RS03750 PF13276 HTH-like domain APS58_RS03785 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) APS58_RS03790 PF00005 ABC transporter APS58_RS03790 PF00664 ABC transporter transmembrane region APS58_RS03800 PF00551 Formyl transferase APS58_RS03810 PF00593 TonB dependent receptor APS58_RS03810 PF07715 TonB-dependent Receptor Plug Domain APS58_RS03815 PF13193 AMP-binding enzyme C-terminal domain APS58_RS03815 PF00668 Condensation domain APS58_RS03815 PF00975 Thioesterase domain APS58_RS03815 PF00550 Phosphopantetheine attachment site APS58_RS03815 PF00501 AMP-binding enzyme APS58_RS03820 PF00668 Condensation domain APS58_RS03820 PF13193 AMP-binding enzyme C-terminal domain APS58_RS03820 PF00501 AMP-binding enzyme APS58_RS03820 PF00550 Phosphopantetheine attachment site APS58_RS03825 PF00501 AMP-binding enzyme APS58_RS03825 PF00668 Condensation domain APS58_RS03825 PF13193 AMP-binding enzyme C-terminal domain APS58_RS03825 PF00550 Phosphopantetheine attachment site APS58_RS03825 PF00975 Thioesterase domain APS58_RS03830 PF00698 Acyl transferase domain APS58_RS03830 PF00668 Condensation domain APS58_RS03830 PF02801 Beta-ketoacyl synthase, C-terminal domain APS58_RS03830 PF16197 Ketoacyl-synthetase C-terminal extension APS58_RS03830 PF00550 Phosphopantetheine attachment site APS58_RS03830 PF00109 Beta-ketoacyl synthase, N-terminal domain APS58_RS03835 PF00501 AMP-binding enzyme APS58_RS03835 PF13193 AMP-binding enzyme C-terminal domain APS58_RS03835 PF00668 Condensation domain APS58_RS03835 PF00550 Phosphopantetheine attachment site APS58_RS03845 PF13193 AMP-binding enzyme C-terminal domain APS58_RS03845 PF00501 AMP-binding enzyme APS58_RS03845 PF00668 Condensation domain APS58_RS03845 PF00550 Phosphopantetheine attachment site APS58_RS03845 PF00975 Thioesterase domain APS58_RS03850 PF03621 MbtH-like protein APS58_RS03875 PF00012 Hsp70 protein APS58_RS03880 PF00012 Hsp70 protein APS58_RS03920 PF00654 Voltage gated chloride channel APS58_RS03955 PF03527 RHS protein APS58_RS03955 PF05593 RHS Repeat APS58_RS03955 PF14220 Domain of unknown function (DUF4329) APS58_RS03960 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS03960 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS03960 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS03960 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS03965 PF00675 Insulinase (Peptidase family M16) APS58_RS03965 PF05193 Peptidase M16 inactive domain APS58_RS03970 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS03980 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS03990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS58_RS03995 PF00920 Dehydratase family APS58_RS04010 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS04010 PF00563 EAL domain APS58_RS04010 PF03707 Bacterial signalling protein N terminal repeat APS58_RS04040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS58_RS04040 PF02403 Seryl-tRNA synthetase N-terminal domain APS58_RS04045 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS04045 PF13291 ACT domain APS58_RS04050 PF01743 Poly A polymerase head domain APS58_RS04050 PF02272 DHHA1 domain APS58_RS04050 PF01368 DHH family APS58_RS04050 PF00571 CBS domain APS58_RS04055 PF01595 Cyclin M transmembrane N-terminal domain APS58_RS04055 PF00571 CBS domain APS58_RS04055 PF03471 Transporter associated domain APS58_RS04060 PF02401 LytB protein APS58_RS04065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS58_RS04070 PF04002 RadC-like JAB domain APS58_RS04090 PF01713 Smr domain APS58_RS04090 PF00488 MutS domain V APS58_RS04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS04100 PF00072 Response regulator receiver domain APS58_RS04100 PF00486 Transcriptional regulatory protein, C terminal APS58_RS04115 PF00149 Calcineurin-like phosphoesterase APS58_RS04115 PF02872 5'-nucleotidase, C-terminal domain APS58_RS04120 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS04120 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS04160 PF13276 HTH-like domain APS58_RS04160 PF13683 Integrase core domain APS58_RS04165 PF03527 RHS protein APS58_RS04165 PF05593 RHS Repeat APS58_RS04190 PF00550 Phosphopantetheine attachment site APS58_RS04200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS58_RS04200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS58_RS04205 PF01554 MatE APS58_RS04210 PF00501 AMP-binding enzyme APS58_RS04210 PF13193 AMP-binding enzyme C-terminal domain APS58_RS04215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS58_RS04215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS58_RS04235 PF03472 Autoinducer binding domain APS58_RS04235 PF00196 Bacterial regulatory proteins, luxR family APS58_RS04240 PF00765 Autoinducer synthase APS58_RS04245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS04245 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS04245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS04250 PF00392 Bacterial regulatory proteins, gntR family APS58_RS04250 PF07729 FCD domain APS58_RS04260 PF01425 Amidase APS58_RS04265 PF13458 Periplasmic binding protein APS58_RS04270 PF00005 ABC transporter APS58_RS04275 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS04275 PF00005 ABC transporter APS58_RS04280 PF02653 Branched-chain amino acid transport system / permease component APS58_RS04280 PF11862 Domain of unknown function (DUF3382) APS58_RS04285 PF02653 Branched-chain amino acid transport system / permease component APS58_RS04290 PF01425 Amidase APS58_RS04295 PF00171 Aldehyde dehydrogenase family APS58_RS04300 PF03466 LysR substrate binding domain APS58_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS04315 PF02634 FdhD/NarQ family APS58_RS04320 PF00384 Molybdopterin oxidoreductase APS58_RS04325 PF00672 HAMP domain APS58_RS04325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS04325 PF02203 Tar ligand binding domain homologue APS58_RS04330 PF07690 Major Facilitator Superfamily APS58_RS04335 PF10609 NUBPL iron-transfer P-loop NTPase APS58_RS04350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS58_RS04350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS58_RS04350 PF00205 Thiamine pyrophosphate enzyme, central domain APS58_RS04355 PF01588 Putative tRNA binding domain APS58_RS04355 PF09334 tRNA synthetases class I (M) APS58_RS04380 PF02616 Segregation and condensation protein ScpA APS58_RS04385 PF00890 FAD binding domain APS58_RS04385 PF02910 Fumarate reductase flavoprotein C-term APS58_RS04390 PF00202 Aminotransferase class-III APS58_RS04400 PF00155 Aminotransferase class I and II APS58_RS04410 PF01242 6-pyruvoyl tetrahydropterin synthase APS58_RS04430 PF04715 Anthranilate synthase component I, N terminal region APS58_RS04430 PF00425 chorismate binding enzyme APS58_RS04435 PF02445 Quinolinate synthetase A protein APS58_RS04440 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APS58_RS04440 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APS58_RS04445 PF02548 Ketopantoate hydroxymethyltransferase APS58_RS04450 PF02569 Pantoate-beta-alanine ligase APS58_RS04455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APS58_RS04455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APS58_RS04460 PF02556 Preprotein translocase subunit SecB APS58_RS04465 PF00462 Glutaredoxin APS58_RS04470 PF00581 Rhodanese-like domain APS58_RS04475 PF00300 Histidine phosphatase superfamily (branch 1) APS58_RS04480 PF03572 Peptidase family S41 APS58_RS04480 PF13180 PDZ domain APS58_RS04485 PF00899 ThiF family APS58_RS04495 PF00196 Bacterial regulatory proteins, luxR family APS58_RS04495 PF00072 Response regulator receiver domain APS58_RS04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS04500 PF07730 Histidine kinase APS58_RS04500 PF05231 MASE1 APS58_RS04505 PF07043 Protein of unknown function (DUF1328) APS58_RS04525 PF10005 zinc-ribbon domain APS58_RS04525 PF15887 Putative zinc-binding metallo-peptidase APS58_RS04530 PF01467 Cytidylyltransferase-like APS58_RS04540 PF05193 Peptidase M16 inactive domain APS58_RS04545 PF05193 Peptidase M16 inactive domain APS58_RS04545 PF00675 Insulinase (Peptidase family M16) APS58_RS04550 PF02881 SRP54-type protein, helical bundle domain APS58_RS04550 PF00448 SRP54-type protein, GTPase domain APS58_RS04555 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS58_RS04565 PF03812 2-keto-3-deoxygluconate permease APS58_RS04580 PF02203 Tar ligand binding domain homologue APS58_RS04580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS04580 PF00672 HAMP domain APS58_RS04585 PF12833 Helix-turn-helix domain APS58_RS04585 PF01965 DJ-1/PfpI family APS58_RS04590 PF01965 DJ-1/PfpI family APS58_RS04595 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS04600 PF01554 MatE APS58_RS04605 PF01914 MarC family integral membrane protein APS58_RS04625 PF00155 Aminotransferase class I and II APS58_RS04630 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS04635 PF00005 ABC transporter APS58_RS04635 PF08402 TOBE domain APS58_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS04645 PF03466 LysR substrate binding domain APS58_RS04655 PF04542 Sigma-70 region 2 APS58_RS04655 PF04545 Sigma-70, region 4 APS58_RS04655 PF00140 Sigma-70 factor, region 1.2 APS58_RS04675 PF02630 SCO1/SenC APS58_RS04680 PF01040 UbiA prenyltransferase family APS58_RS04685 PF02628 Cytochrome oxidase assembly protein APS58_RS04705 PF00510 Cytochrome c oxidase subunit III APS58_RS04715 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 APS58_RS04720 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS58_RS04725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS58_RS04725 PF02790 Cytochrome C oxidase subunit II, transmembrane domain APS58_RS04730 PF08241 Methyltransferase domain APS58_RS04740 PF00588 SpoU rRNA Methylase family APS58_RS04745 PF03466 LysR substrate binding domain APS58_RS04745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS04755 PF01575 MaoC like domain APS58_RS04760 PF13614 AAA domain APS58_RS04765 PF01810 LysE type translocator APS58_RS04770 PF00999 Sodium/hydrogen exchanger family APS58_RS04770 PF02254 TrkA-N domain APS58_RS04775 PF07715 TonB-dependent Receptor Plug Domain APS58_RS04775 PF00593 TonB dependent receptor APS58_RS04795 PF01292 Prokaryotic cytochrome b561 APS58_RS04800 PF12802 MarR family APS58_RS04805 PF02203 Tar ligand binding domain homologue APS58_RS04805 PF00672 HAMP domain APS58_RS04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS04810 PF07690 Major Facilitator Superfamily APS58_RS04815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS58_RS04815 PF00034 Cytochrome c APS58_RS04815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS58_RS04820 PF01799 [2Fe-2S] binding domain APS58_RS04820 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS04825 PF01494 FAD binding domain APS58_RS04830 PF17645 Arylmalonate decarboxylase APS58_RS04835 PF00561 alpha/beta hydrolase fold APS58_RS04845 PF00857 Isochorismatase family APS58_RS04850 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS58_RS04850 PF00034 Cytochrome c APS58_RS04850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS58_RS04870 PF00723 Glycosyl hydrolases family 15 APS58_RS04875 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS04880 PF02426 Muconolactone delta-isomerase APS58_RS04885 PF02667 Short chain fatty acid transporter APS58_RS04890 PF00106 short chain dehydrogenase APS58_RS04905 PF12146 Serine aminopeptidase, S33 APS58_RS04910 PF00108 Thiolase, N-terminal domain APS58_RS04910 PF02803 Thiolase, C-terminal domain APS58_RS04915 PF01144 Coenzyme A transferase APS58_RS04920 PF01144 Coenzyme A transferase APS58_RS04925 PF09339 IclR helix-turn-helix domain APS58_RS04925 PF01614 Bacterial transcriptional regulator APS58_RS04950 PF00034 Cytochrome c APS58_RS04955 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS04955 PF17862 AAA+ lid domain APS58_RS04955 PF01434 Peptidase family M41 APS58_RS04975 PF04357 TamB, inner membrane protein subunit of TAM complex APS58_RS05010 PF13091 PLD-like domain APS58_RS05015 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS05020 PF00486 Transcriptional regulatory protein, C terminal APS58_RS05020 PF00072 Response regulator receiver domain APS58_RS05025 PF13180 PDZ domain APS58_RS05040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS58_RS05070 PF00296 Luciferase-like monooxygenase APS58_RS05075 PF00482 Type II secretion system (T2SS), protein F APS58_RS05100 PF00005 ABC transporter APS58_RS05100 PF00664 ABC transporter transmembrane region APS58_RS05105 PF02875 Mur ligase family, glutamate ligase domain APS58_RS05105 PF08245 Mur ligase middle domain APS58_RS05105 PF08443 RimK-like ATP-grasp domain APS58_RS05110 PF08245 Mur ligase middle domain APS58_RS05110 PF02875 Mur ligase family, glutamate ligase domain APS58_RS05110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS58_RS05115 PF05981 CreA protein APS58_RS05130 PF13532 2OG-Fe(II) oxygenase superfamily APS58_RS05145 PF18011 C-terminal domain found in long catalases APS58_RS05145 PF06628 Catalase-related immune-responsive APS58_RS05145 PF00199 Catalase APS58_RS05150 PF00072 Response regulator receiver domain APS58_RS05150 PF00486 Transcriptional regulatory protein, C terminal APS58_RS05155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS05155 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS05155 PF09308 LuxQ, periplasmic APS58_RS05155 PF00072 Response regulator receiver domain APS58_RS05160 PF01339 CheB methylesterase APS58_RS05165 PF01739 CheR methyltransferase, SAM binding domain APS58_RS05165 PF03705 CheR methyltransferase, all-alpha domain APS58_RS05170 PF00072 Response regulator receiver domain APS58_RS05170 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS05170 PF01627 Hpt domain APS58_RS05170 PF00672 HAMP domain APS58_RS05170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS58_RS05180 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS05190 PF00593 TonB dependent receptor APS58_RS05190 PF07715 TonB-dependent Receptor Plug Domain APS58_RS05200 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS05205 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS05205 PF12911 N-terminal TM domain of oligopeptide transport permease C APS58_RS05210 PF00005 ABC transporter APS58_RS05215 PF00570 HRDC domain APS58_RS05215 PF00271 Helicase conserved C-terminal domain APS58_RS05215 PF00270 DEAD/DEAH box helicase APS58_RS05215 PF09382 RQC domain APS58_RS05215 PF16124 RecQ zinc-binding APS58_RS05235 PF05593 RHS Repeat APS58_RS05235 PF14220 Domain of unknown function (DUF4329) APS58_RS05235 PF03527 RHS protein APS58_RS05235 PF14220 Domain of unknown function (DUF4329) APS58_RS05235 PF03527 RHS protein APS58_RS05235 PF05593 RHS Repeat APS58_RS05240 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS05240 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS05240 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS05240 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS05255 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APS58_RS05255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS58_RS05260 PF00941 FAD binding domain in molybdopterin dehydrogenase APS58_RS05260 PF03450 CO dehydrogenase flavoprotein C-terminal domain APS58_RS05265 PF10518 TAT (twin-arginine translocation) pathway signal sequence APS58_RS05265 PF01799 [2Fe-2S] binding domain APS58_RS05265 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS05280 PF00107 Zinc-binding dehydrogenase APS58_RS05280 PF13823 Alcohol dehydrogenase GroES-associated APS58_RS05280 PF08240 Alcohol dehydrogenase GroES-like domain APS58_RS05290 PF00881 Nitroreductase family APS58_RS05305 PF00149 Calcineurin-like phosphoesterase APS58_RS05305 PF02872 5'-nucleotidase, C-terminal domain APS58_RS05310 PF03466 LysR substrate binding domain APS58_RS05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS05315 PF03601 Conserved hypothetical protein 698 APS58_RS05325 PF03449 Transcription elongation factor, N-terminal APS58_RS05325 PF01272 Transcription elongation factor, GreA/GreB, C-term APS58_RS05350 PF12146 Serine aminopeptidase, S33 APS58_RS05360 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) APS58_RS05365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APS58_RS05365 PF00361 Proton-conducting membrane transporter APS58_RS05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS05370 PF03466 LysR substrate binding domain APS58_RS05375 PF00717 Peptidase S24-like APS58_RS05395 PF01380 SIS domain APS58_RS05405 PF01627 Hpt domain APS58_RS05405 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS05405 PF00072 Response regulator receiver domain APS58_RS05405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS58_RS05405 PF00672 HAMP domain APS58_RS05410 PF00132 Bacterial transferase hexapeptide (six repeats) APS58_RS05410 PF12804 MobA-like NTP transferase domain APS58_RS05415 PF13545 Crp-like helix-turn-helix domain APS58_RS05415 PF00027 Cyclic nucleotide-binding domain APS58_RS05435 PF03466 LysR substrate binding domain APS58_RS05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS05440 PF01479 S4 domain APS58_RS05440 PF00579 tRNA synthetases class I (W and Y) APS58_RS05450 PF03702 Anhydro-N-acetylmuramic acid kinase APS58_RS05455 PF07690 Major Facilitator Superfamily APS58_RS05460 PF01521 Iron-sulphur cluster biosynthesis APS58_RS05475 PF00380 Ribosomal protein S9/S16 APS58_RS05480 PF00572 Ribosomal protein L13 APS58_RS05485 PF00069 Protein kinase domain APS58_RS05485 PF13360 PQQ-like domain APS58_RS05490 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ APS58_RS05495 PF03330 Lytic transglycolase APS58_RS05510 PF02219 Methylenetetrahydrofolate reductase APS58_RS05515 PF01728 FtsJ-like methyltransferase APS58_RS05515 PF01479 S4 domain APS58_RS05520 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APS58_RS05520 PF05221 S-adenosyl-L-homocysteine hydrolase APS58_RS05525 PF01757 Acyltransferase family APS58_RS05530 PF00009 Elongation factor Tu GTP binding domain APS58_RS05530 PF03144 Elongation factor Tu domain 2 APS58_RS05530 PF16658 Class II release factor RF3, C-terminal domain APS58_RS05540 PF00893 Small Multidrug Resistance protein APS58_RS05560 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS05570 PF00005 ABC transporter APS58_RS05575 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS05580 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS05585 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS05590 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS05595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS05595 PF03466 LysR substrate binding domain APS58_RS05600 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component APS58_RS05605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS58_RS05605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component APS58_RS05610 PF03480 Bacterial extracellular solute-binding protein, family 7 APS58_RS05615 PF00664 ABC transporter transmembrane region APS58_RS05615 PF00005 ABC transporter APS58_RS05620 PF03061 Thioesterase superfamily APS58_RS05630 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS05635 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS05645 PF00108 Thiolase, N-terminal domain APS58_RS05645 PF02803 Thiolase, C-terminal domain APS58_RS05665 PF12806 Acetyl-CoA dehydrogenase C-terminal like APS58_RS05665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS05665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS05665 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS05675 PF00440 Bacterial regulatory proteins, tetR family APS58_RS05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS05680 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS05685 PF00486 Transcriptional regulatory protein, C terminal APS58_RS05685 PF00072 Response regulator receiver domain APS58_RS05690 PF00696 Amino acid kinase family APS58_RS05720 PF00005 ABC transporter APS58_RS05745 PF00263 Bacterial type II and III secretion system protein APS58_RS05745 PF03958 Bacterial type II/III secretion system short domain APS58_RS05775 PF07963 Prokaryotic N-terminal methylation motif APS58_RS05780 PF12019 Type II transport protein GspH APS58_RS05785 PF07963 Prokaryotic N-terminal methylation motif APS58_RS05785 PF08334 Type II secretion system (T2SS), protein G APS58_RS05790 PF00482 Type II secretion system (T2SS), protein F APS58_RS05795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain APS58_RS05795 PF00437 Type II/IV secretion system protein APS58_RS05805 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APS58_RS05810 PF00483 Nucleotidyl transferase APS58_RS05815 PF04321 RmlD substrate binding domain APS58_RS05820 PF16363 GDP-mannose 4,6 dehydratase APS58_RS05835 PF03309 Type III pantothenate kinase APS58_RS05840 PF04972 BON domain APS58_RS05840 PF01476 LysM domain APS58_RS05860 PF01553 Acyltransferase APS58_RS05875 PF05746 DALR anticodon binding domain APS58_RS05875 PF02092 Glycyl-tRNA synthetase beta subunit APS58_RS05880 PF02091 Glycyl-tRNA synthetase alpha subunit APS58_RS05885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS58_RS05890 PF02801 Beta-ketoacyl synthase, C-terminal domain APS58_RS05890 PF00109 Beta-ketoacyl synthase, N-terminal domain APS58_RS05895 PF07977 FabA-like domain APS58_RS05900 PF00710 Asparaginase, N-terminal APS58_RS05900 PF17763 Glutaminase/Asparaginase C-terminal domain APS58_RS05905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS05905 PF03466 LysR substrate binding domain APS58_RS05910 PF00795 Carbon-nitrogen hydrolase APS58_RS05915 PF03471 Transporter associated domain APS58_RS05915 PF00571 CBS domain APS58_RS05930 PF01037 Lrp/AsnC ligand binding domain APS58_RS05935 PF00561 alpha/beta hydrolase fold APS58_RS05945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS58_RS05950 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS05955 PF00351 Biopterin-dependent aromatic amino acid hydroxylase APS58_RS05975 PF13407 Periplasmic binding protein domain APS58_RS05980 PF00005 ABC transporter APS58_RS05985 PF02653 Branched-chain amino acid transport system / permease component APS58_RS05990 PF00356 Bacterial regulatory proteins, lacI family APS58_RS05995 PF00294 pfkB family carbohydrate kinase APS58_RS06000 PF05025 RbsD / FucU transport protein family APS58_RS06015 PF10145 Phage-related minor tail protein APS58_RS06015 PF01551 Peptidase family M23 APS58_RS06015 PF01464 Transglycosylase SLT domain APS58_RS06020 PF01812 5-formyltetrahydrofolate cyclo-ligase family APS58_RS06030 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS06030 PF13417 Glutathione S-transferase, N-terminal domain APS58_RS06045 PF12627 Probable RNA and SrmB- binding site of polymerase A APS58_RS06045 PF01743 Poly A polymerase head domain APS58_RS06045 PF01966 HD domain APS58_RS06050 PF00085 Thioredoxin APS58_RS06055 PF02358 Trehalose-phosphatase APS58_RS06060 PF00723 Glycosyl hydrolases family 15 APS58_RS06065 PF00982 Glycosyltransferase family 20 APS58_RS06085 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS06110 PF04328 Selenoprotein, putative APS58_RS06115 PF02554 Carbon starvation protein CstA APS58_RS06115 PF13722 5TM C-terminal transporter carbon starvation CstA APS58_RS06120 PF00072 Response regulator receiver domain APS58_RS06120 PF00196 Bacterial regulatory proteins, luxR family APS58_RS06125 PF17200 Single Cache domain 2 APS58_RS06125 PF07730 Histidine kinase APS58_RS06130 PF01171 PP-loop family APS58_RS06140 PF00300 Histidine phosphatase superfamily (branch 1) APS58_RS06145 PF14031 Putative serine dehydratase domain APS58_RS06145 PF01168 Alanine racemase, N-terminal domain APS58_RS06165 PF05496 Holliday junction DNA helicase RuvB P-loop domain APS58_RS06165 PF17864 RuvB AAA lid domain APS58_RS06165 PF05491 RuvB C-terminal winged helix domain APS58_RS06180 PF01330 RuvA N terminal domain APS58_RS06180 PF07499 RuvA, C-terminal domain APS58_RS06185 PF02562 PhoH-like protein APS58_RS06205 PF02130 Uncharacterized protein family UPF0054 APS58_RS06210 PF02580 D-Tyr-tRNA(Tyr) deacylase APS58_RS06215 PF16916 Dimerisation domain of Zinc Transporter APS58_RS06215 PF01545 Cation efflux family APS58_RS06220 PF00271 Helicase conserved C-terminal domain APS58_RS06220 PF03880 DbpA RNA binding domain APS58_RS06220 PF00270 DEAD/DEAH box helicase APS58_RS06225 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus APS58_RS06225 PF01048 Phosphorylase superfamily APS58_RS06230 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS06230 PF05230 MASE2 domain APS58_RS06245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS58_RS06250 PF00294 pfkB family carbohydrate kinase APS58_RS06255 PF00381 PTS HPr component phosphorylation site APS58_RS06255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS58_RS06255 PF00391 PEP-utilising enzyme, mobile domain APS58_RS06255 PF02896 PEP-utilising enzyme, TIM barrel domain APS58_RS06255 PF05524 PEP-utilising enzyme, N-terminal APS58_RS06260 PF00356 Bacterial regulatory proteins, lacI family APS58_RS06275 PF00012 Hsp70 protein APS58_RS06280 PF00082 Subtilase family APS58_RS06285 PF02222 ATP-grasp domain APS58_RS06290 PF00005 ABC transporter APS58_RS06295 PF01061 ABC-2 type transporter APS58_RS06300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS58_RS06300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS58_RS06305 PF01614 Bacterial transcriptional regulator APS58_RS06305 PF09339 IclR helix-turn-helix domain APS58_RS06310 PF01613 Flavin reductase like domain APS58_RS06315 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS06320 PF01042 Endoribonuclease L-PSP APS58_RS06325 PF04909 Amidohydrolase APS58_RS06330 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS58_RS06335 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS58_RS06340 PF03328 HpcH/HpaI aldolase/citrate lyase family APS58_RS06345 PF01047 MarR family APS58_RS06350 PF02566 OsmC-like protein APS58_RS06360 PF03793 PASTA domain APS58_RS06360 PF00069 Protein kinase domain APS58_RS06365 PF01636 Phosphotransferase enzyme family APS58_RS06370 PF00072 Response regulator receiver domain APS58_RS06370 PF00486 Transcriptional regulatory protein, C terminal APS58_RS06380 PF01547 Bacterial extracellular solute-binding protein APS58_RS06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS06385 PF00672 HAMP domain APS58_RS06385 PF01627 Hpt domain APS58_RS06385 PF17149 Periplasmic sensor domain found in signal transduction proteins APS58_RS06385 PF00072 Response regulator receiver domain APS58_RS06385 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS06405 PF05593 RHS Repeat APS58_RS06405 PF03527 RHS protein APS58_RS06405 PF14220 Domain of unknown function (DUF4329) APS58_RS06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS06445 PF00183 Hsp90 protein APS58_RS06460 PF01479 S4 domain APS58_RS06460 PF00849 RNA pseudouridylate synthase APS58_RS06465 PF00563 EAL domain APS58_RS06465 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS06465 PF03707 Bacterial signalling protein N terminal repeat APS58_RS06475 PF02203 Tar ligand binding domain homologue APS58_RS06475 PF00672 HAMP domain APS58_RS06475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS06480 PF00027 Cyclic nucleotide-binding domain APS58_RS06480 PF13545 Crp-like helix-turn-helix domain APS58_RS06490 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS06495 PF03372 Endonuclease/Exonuclease/phosphatase family APS58_RS06500 PF13091 PLD-like domain APS58_RS06505 PF03706 Lysylphosphatidylglycerol synthase TM region APS58_RS06520 PF00672 HAMP domain APS58_RS06520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS06520 PF02203 Tar ligand binding domain homologue APS58_RS06525 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS06530 PF00596 Class II Aldolase and Adducin N-terminal domain APS58_RS06535 PF00766 Electron transfer flavoprotein FAD-binding domain APS58_RS06535 PF01012 Electron transfer flavoprotein domain APS58_RS06540 PF01012 Electron transfer flavoprotein domain APS58_RS06550 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS06555 PF02515 CoA-transferase family III APS58_RS06560 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS06565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS06565 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS06565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS06570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS06570 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS06570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS06575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS58_RS06575 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS06575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS58_RS06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS06580 PF03466 LysR substrate binding domain APS58_RS06585 PF01435 Peptidase family M48 APS58_RS06600 PF01979 Amidohydrolase family APS58_RS06605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS06605 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS06605 PF00672 HAMP domain APS58_RS06610 PF00486 Transcriptional regulatory protein, C terminal APS58_RS06610 PF00072 Response regulator receiver domain APS58_RS06625 PF12704 MacB-like periplasmic core domain APS58_RS06625 PF00005 ABC transporter APS58_RS06625 PF02687 FtsX-like permease family APS58_RS06645 PF00892 EamA-like transporter family APS58_RS06655 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS58_RS06670 PF00202 Aminotransferase class-III APS58_RS06705 PF00005 ABC transporter APS58_RS06705 PF17760 UvrA interaction domain APS58_RS06705 PF17755 UvrA DNA-binding domain APS58_RS06710 PF13458 Periplasmic binding protein APS58_RS06720 PF13609 Gram-negative porin APS58_RS06725 PF13609 Gram-negative porin APS58_RS06730 PF00083 Sugar (and other) transporter APS58_RS06730 PF08946 Osmosensory transporter coiled coil APS58_RS06735 PF01323 DSBA-like thioredoxin domain APS58_RS06750 PF00682 HMGL-like APS58_RS06755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS58_RS06760 PF02785 Biotin carboxylase C-terminal domain APS58_RS06760 PF00289 Biotin carboxylase, N-terminal domain APS58_RS06760 PF00364 Biotin-requiring enzyme APS58_RS06760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS58_RS06770 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS06775 PF01039 Carboxyl transferase domain APS58_RS06780 PF13193 AMP-binding enzyme C-terminal domain APS58_RS06780 PF00501 AMP-binding enzyme APS58_RS06800 PF13419 Haloacid dehalogenase-like hydrolase APS58_RS06805 PF00072 Response regulator receiver domain APS58_RS06805 PF01627 Hpt domain APS58_RS06805 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS06820 PF03575 Peptidase family S51 APS58_RS06825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS06825 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS06825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS06840 PF02803 Thiolase, C-terminal domain APS58_RS06840 PF00108 Thiolase, N-terminal domain APS58_RS06845 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) APS58_RS06850 PF00484 Carbonic anhydrase APS58_RS06855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS06855 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS06855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS06865 PF13411 MerR HTH family regulatory protein APS58_RS06895 PF16326 ABC transporter C-terminal domain APS58_RS06895 PF00005 ABC transporter APS58_RS06895 PF12848 ABC transporter APS58_RS06900 PF01339 CheB methylesterase APS58_RS06900 PF00072 Response regulator receiver domain APS58_RS06905 PF03975 CheD chemotactic sensory transduction APS58_RS06910 PF03705 CheR methyltransferase, all-alpha domain APS58_RS06910 PF01739 CheR methyltransferase, SAM binding domain APS58_RS06915 PF01584 CheW-like domain APS58_RS06920 PF01584 CheW-like domain APS58_RS06920 PF01627 Hpt domain APS58_RS06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS06920 PF02895 Signal transducing histidine kinase, homodimeric domain APS58_RS06920 PF09078 CheY binding APS58_RS06925 PF00072 Response regulator receiver domain APS58_RS06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS06935 PF07730 Histidine kinase APS58_RS06935 PF05231 MASE1 APS58_RS06940 PF00072 Response regulator receiver domain APS58_RS06940 PF00196 Bacterial regulatory proteins, luxR family APS58_RS06945 PF01311 Bacterial export proteins, family 1 APS58_RS06950 PF01313 Bacterial export proteins, family 3 APS58_RS06955 PF00813 FliP family APS58_RS06965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS58_RS06965 PF16973 Flagellar motor switch protein FliN N-terminal APS58_RS06970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS58_RS06970 PF02154 Flagellar motor switch protein FliM APS58_RS06975 PF03748 Flagellar basal body-associated protein FliL APS58_RS06990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS58_RS06990 PF18269 T3SS EscN ATPase C-terminal domain APS58_RS07000 PF01706 FliG C-terminal domain APS58_RS07000 PF14841 FliG middle domain APS58_RS07000 PF14842 FliG N-terminal domain APS58_RS07005 PF08345 Flagellar M-ring protein C-terminal APS58_RS07005 PF01514 Secretory protein of YscJ/FliF family APS58_RS07010 PF02049 Flagellar hook-basal body complex protein FliE APS58_RS07020 PF02561 Flagellar protein FliS APS58_RS07025 PF07196 Flagellin hook IN motif APS58_RS07025 PF02465 Flagellar hook-associated protein 2 N-terminus APS58_RS07025 PF07195 Flagellar hook-associated protein 2 C-terminus APS58_RS07030 PF00669 Bacterial flagellin N-terminal helical region APS58_RS07030 PF00700 Bacterial flagellin C-terminal helical region APS58_RS07035 PF00700 Bacterial flagellin C-terminal helical region APS58_RS07035 PF00669 Bacterial flagellin N-terminal helical region APS58_RS07040 PF08889 WbqC-like protein family APS58_RS07045 PF13649 Methyltransferase domain APS58_RS07055 PF01266 FAD dependent oxidoreductase APS58_RS07060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS58_RS07065 PF00535 Glycosyl transferase family 2 APS58_RS07070 PF01618 MotA/TolQ/ExbB proton channel family APS58_RS07075 PF00691 OmpA family APS58_RS07075 PF13677 Membrane MotB of proton-channel complex MotA/MotB APS58_RS07080 PF00072 Response regulator receiver domain APS58_RS07085 PF04344 Chemotaxis phosphatase, CheZ APS58_RS07090 PF01312 FlhB HrpN YscU SpaS Family APS58_RS07095 PF00771 FHIPEP family APS58_RS07100 PF00448 SRP54-type protein, GTPase domain APS58_RS07110 PF04542 Sigma-70 region 2 APS58_RS07110 PF04539 Sigma-70 region 3 APS58_RS07110 PF04545 Sigma-70, region 4 APS58_RS07130 PF00460 Flagella basal body rod protein APS58_RS07135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS58_RS07135 PF00460 Flagella basal body rod protein APS58_RS07140 PF13861 FlgD Tudor-like domain APS58_RS07140 PF13860 FlgD Ig-like domain APS58_RS07140 PF03963 Flagellar hook capping protein - N-terminal region APS58_RS07145 PF07559 Flagellar basal body protein FlaE APS58_RS07145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS58_RS07145 PF00460 Flagella basal body rod protein APS58_RS07150 PF00460 Flagella basal body rod protein APS58_RS07150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS58_RS07155 PF00460 Flagella basal body rod protein APS58_RS07155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS58_RS07160 PF02107 Flagellar L-ring protein APS58_RS07170 PF02119 Flagellar P-ring protein APS58_RS07175 PF10135 Rod binding protein APS58_RS07175 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APS58_RS07180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS58_RS07180 PF00460 Flagella basal body rod protein APS58_RS07185 PF00700 Bacterial flagellin C-terminal helical region APS58_RS07185 PF00669 Bacterial flagellin N-terminal helical region APS58_RS07205 PF00155 Aminotransferase class I and II APS58_RS07205 PF00392 Bacterial regulatory proteins, gntR family APS58_RS07210 PF01810 LysE type translocator APS58_RS07215 PF00892 EamA-like transporter family APS58_RS07220 PF00155 Aminotransferase class I and II APS58_RS07225 PF13417 Glutathione S-transferase, N-terminal domain APS58_RS07225 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS07230 PF02567 Phenazine biosynthesis-like protein APS58_RS07240 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS07300 PF01970 Tripartite tricarboxylate transporter TctA family APS58_RS07320 PF00107 Zinc-binding dehydrogenase APS58_RS07320 PF08240 Alcohol dehydrogenase GroES-like domain APS58_RS07325 PF02272 DHHA1 domain APS58_RS07325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS58_RS07325 PF01411 tRNA synthetases class II (A) APS58_RS07355 PF03741 Integral membrane protein TerC family APS58_RS07360 PF03466 LysR substrate binding domain APS58_RS07360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS07380 PF00884 Sulfatase APS58_RS07380 PF16385 Domain of unknown function APS58_RS07385 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS07395 PF01208 Uroporphyrinogen decarboxylase (URO-D) APS58_RS07405 PF17764 3′ DNA-binding domain (3′BD) APS58_RS07405 PF00271 Helicase conserved C-terminal domain APS58_RS07405 PF00270 DEAD/DEAH box helicase APS58_RS07405 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APS58_RS07405 PF18074 Primosomal protein N C-terminal domain APS58_RS07425 PF13361 UvrD-like helicase C-terminal domain APS58_RS07425 PF00580 UvrD/REP helicase N-terminal domain APS58_RS07430 PF02253 Phospholipase A1 APS58_RS07445 PF00582 Universal stress protein family APS58_RS07450 PF01702 Queuine tRNA-ribosyltransferase APS58_RS07515 PF01037 Lrp/AsnC ligand binding domain APS58_RS07520 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS07530 PF02203 Tar ligand binding domain homologue APS58_RS07530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS07530 PF00672 HAMP domain APS58_RS07570 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS07575 PF13454 FAD-NAD(P)-binding APS58_RS07585 PF01266 FAD dependent oxidoreductase APS58_RS07605 PF13350 Tyrosine phosphatase family APS58_RS07620 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS07625 PF00005 ABC transporter APS58_RS07640 PF04244 Deoxyribodipyrimidine photo-lyase-related protein APS58_RS07655 PF13391 HNH endonuclease APS58_RS07660 PF07995 Glucose / Sorbosone dehydrogenase APS58_RS07665 PF00080 Copper/zinc superoxide dismutase (SODC) APS58_RS07680 PF00158 Sigma-54 interaction domain APS58_RS07680 PF02954 Bacterial regulatory protein, Fis family APS58_RS07680 PF00072 Response regulator receiver domain APS58_RS07685 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS07685 PF00672 HAMP domain APS58_RS07685 PF00989 PAS fold APS58_RS07695 PF01189 16S rRNA methyltransferase RsmB/F APS58_RS07695 PF01029 NusB family APS58_RS07705 PF04983 RNA polymerase Rpb1, domain 3 APS58_RS07705 PF05000 RNA polymerase Rpb1, domain 4 APS58_RS07705 PF04998 RNA polymerase Rpb1, domain 5 APS58_RS07705 PF00623 RNA polymerase Rpb1, domain 2 APS58_RS07705 PF04997 RNA polymerase Rpb1, domain 1 APS58_RS07710 PF04563 RNA polymerase beta subunit APS58_RS07710 PF04561 RNA polymerase Rpb2, domain 2 APS58_RS07710 PF00562 RNA polymerase Rpb2, domain 6 APS58_RS07710 PF10385 RNA polymerase beta subunit external 1 domain APS58_RS07710 PF04560 RNA polymerase Rpb2, domain 7 APS58_RS07710 PF04565 RNA polymerase Rpb2, domain 3 APS58_RS07715 PF00542 Ribosomal protein L7/L12 C-terminal domain APS58_RS07715 PF16320 Ribosomal protein L7/L12 dimerisation domain APS58_RS07720 PF00466 Ribosomal protein L10 APS58_RS07725 PF00687 Ribosomal protein L1p/L10e family APS58_RS07730 PF00298 Ribosomal protein L11, RNA binding domain APS58_RS07730 PF03946 Ribosomal protein L11, N-terminal domain APS58_RS07735 PF00467 KOW motif APS58_RS07735 PF02357 Transcription termination factor nusG APS58_RS07740 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APS58_RS07750 PF03143 Elongation factor Tu C-terminal domain APS58_RS07750 PF03144 Elongation factor Tu domain 2 APS58_RS07750 PF00009 Elongation factor Tu GTP binding domain APS58_RS07795 PF02951 Prokaryotic glutathione synthetase, N-terminal domain APS58_RS07795 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APS58_RS07800 PF03594 Benzoate membrane transport protein APS58_RS07805 PF02705 K+ potassium transporter APS58_RS07820 PF02080 TrkA-C domain APS58_RS07820 PF02254 TrkA-N domain APS58_RS07825 PF00171 Aldehyde dehydrogenase family APS58_RS07845 PF08264 Anticodon-binding domain of tRNA APS58_RS07845 PF09334 tRNA synthetases class I (M) APS58_RS07845 PF13603 Leucyl-tRNA synthetase, Domain 2 APS58_RS07845 PF00133 tRNA synthetases class I (I, L, M and V) APS58_RS07855 PF03707 Bacterial signalling protein N terminal repeat APS58_RS07855 PF00563 EAL domain APS58_RS07855 PF13188 PAS domain APS58_RS07855 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS07860 PF02472 Biopolymer transport protein ExbD/TolR APS58_RS07865 PF01618 MotA/TolQ/ExbB proton channel family APS58_RS07870 PF01113 Dihydrodipicolinate reductase, N-terminus APS58_RS07870 PF05173 Dihydrodipicolinate reductase, C-terminus APS58_RS07875 PF04355 SmpA / OmlA family APS58_RS07880 PF01475 Ferric uptake regulator family APS58_RS07885 PF02603 HPr Serine kinase N terminus APS58_RS07885 PF07475 HPr Serine kinase C-terminal domain APS58_RS07890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS58_RS07895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APS58_RS07900 PF01259 SAICAR synthetase APS58_RS07910 PF00085 Thioredoxin APS58_RS07915 PF00731 AIR carboxylase APS58_RS07920 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APS58_RS07920 PF02222 ATP-grasp domain APS58_RS07925 PF03481 Putative GTP-binding controlling metal-binding APS58_RS07925 PF01300 Telomere recombination APS58_RS07950 PF00814 Glycoprotease family APS58_RS07965 PF01544 CorA-like Mg2+ transporter protein APS58_RS07970 PF01048 Phosphorylase superfamily APS58_RS07975 PF00501 AMP-binding enzyme APS58_RS07975 PF13193 AMP-binding enzyme C-terminal domain APS58_RS07985 PF01116 Fructose-bisphosphate aldolase class-II APS58_RS07990 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS07995 PF00486 Transcriptional regulatory protein, C terminal APS58_RS07995 PF00072 Response regulator receiver domain APS58_RS08010 PF00224 Pyruvate kinase, barrel domain APS58_RS08010 PF02887 Pyruvate kinase, alpha/beta domain APS58_RS08015 PF00557 Metallopeptidase family M24 APS58_RS08015 PF05195 Aminopeptidase P, N-terminal domain APS58_RS08020 PF00483 Nucleotidyl transferase APS58_RS08030 PF00456 Transketolase, thiamine diphosphate binding domain APS58_RS08030 PF02780 Transketolase, C-terminal domain APS58_RS08030 PF02779 Transketolase, pyrimidine binding domain APS58_RS08050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APS58_RS08050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS58_RS08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS08060 PF03466 LysR substrate binding domain APS58_RS08070 PF05736 OprF membrane domain APS58_RS08070 PF00691 OmpA family APS58_RS08095 PF07722 Peptidase C26 APS58_RS08130 PF05726 Pirin C-terminal cupin domain APS58_RS08130 PF02678 Pirin APS58_RS08150 PF00924 Mechanosensitive ion channel APS58_RS08165 PF00106 short chain dehydrogenase APS58_RS08180 PF06983 3-demethylubiquinone-9 3-methyltransferase APS58_RS08215 PF13361 UvrD-like helicase C-terminal domain APS58_RS08215 PF00580 UvrD/REP helicase N-terminal domain APS58_RS08235 PF06271 RDD family APS58_RS08265 PF01751 Toprim domain APS58_RS08265 PF01131 DNA topoisomerase APS58_RS08275 PF08279 HTH domain APS58_RS08275 PF03099 Biotin/lipoate A/B protein ligase family APS58_RS08275 PF02237 Biotin protein ligase C terminal domain APS58_RS08285 PF02661 Fic/DOC family APS58_RS08300 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS08305 PF03466 LysR substrate binding domain APS58_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS08315 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS08315 PF08521 Two-component sensor kinase N-terminal APS58_RS08320 PF00072 Response regulator receiver domain APS58_RS08320 PF00486 Transcriptional regulatory protein, C terminal APS58_RS08330 PF00154 recA bacterial DNA recombination protein APS58_RS08335 PF02631 RecX family APS58_RS08345 PF02355 Protein export membrane protein APS58_RS08345 PF07549 SecD/SecF GG Motif APS58_RS08350 PF13721 SecD export protein N-terminal TM region APS58_RS08350 PF07549 SecD/SecF GG Motif APS58_RS08350 PF02355 Protein export membrane protein APS58_RS08355 PF02699 Preprotein translocase subunit APS58_RS08365 PF01037 Lrp/AsnC ligand binding domain APS58_RS08375 PF05977 Transmembrane secretion effector APS58_RS08395 PF06725 3D domain APS58_RS08395 PF03562 MltA specific insert domain APS58_RS08400 PF04972 BON domain APS58_RS08400 PF00691 OmpA family APS58_RS08405 PF00196 Bacterial regulatory proteins, luxR family APS58_RS08405 PF00072 Response regulator receiver domain APS58_RS08410 PF00989 PAS fold APS58_RS08410 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS08415 PF00795 Carbon-nitrogen hydrolase APS58_RS08425 PF03710 Glutamate-ammonia ligase adenylyltransferase APS58_RS08425 PF08335 GlnD PII-uridylyltransferase APS58_RS08430 PF00975 Thioesterase domain APS58_RS08430 PF00550 Phosphopantetheine attachment site APS58_RS08430 PF00668 Condensation domain APS58_RS08430 PF13193 AMP-binding enzyme C-terminal domain APS58_RS08430 PF00501 AMP-binding enzyme APS58_RS08445 PF00440 Bacterial regulatory proteins, tetR family APS58_RS08445 PF08361 MAATS-type transcriptional repressor, C-terminal region APS58_RS08450 PF02321 Outer membrane efflux protein APS58_RS08455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS08460 PF00873 AcrB/AcrD/AcrF family APS58_RS08470 PF11871 Domain of unknown function (DUF3391) APS58_RS08470 PF01966 HD domain APS58_RS08475 PF00255 Glutathione peroxidase APS58_RS08480 PF13417 Glutathione S-transferase, N-terminal domain APS58_RS08480 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS08485 PF08328 Adenylosuccinate lyase C-terminal APS58_RS08485 PF00206 Lyase APS58_RS08490 PF07152 YaeQ protein APS58_RS08505 PF03741 Integral membrane protein TerC family APS58_RS08515 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV APS58_RS08520 PF13181 Tetratricopeptide repeat APS58_RS08520 PF01435 Peptidase family M48 APS58_RS08525 PF01967 MoaC family APS58_RS08535 PF11846 Virulence factor membrane-bound polymerase, C-terminal APS58_RS08535 PF04932 O-Antigen ligase APS58_RS08535 PF15864 Protein glycosylation ligase APS58_RS08540 PF07963 Prokaryotic N-terminal methylation motif APS58_RS08540 PF00114 Pilin (bacterial filament) APS58_RS08545 PF00498 FHA domain APS58_RS08545 PF12773 Double zinc ribbon APS58_RS08555 PF03741 Integral membrane protein TerC family APS58_RS08560 PF00549 CoA-ligase APS58_RS08560 PF02629 CoA binding domain APS58_RS08565 PF00549 CoA-ligase APS58_RS08565 PF08442 ATP-grasp domain APS58_RS08570 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS58_RS08575 PF17782 DprA winged helix domain APS58_RS08575 PF02481 DNA recombination-mediator protein A APS58_RS08585 PF01327 Polypeptide deformylase APS58_RS08595 PF02911 Formyl transferase, C-terminal domain APS58_RS08595 PF00551 Formyl transferase APS58_RS08610 PF00162 Phosphoglycerate kinase APS58_RS08620 PF00892 EamA-like transporter family APS58_RS08625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS58_RS08630 PF01757 Acyltransferase family APS58_RS08640 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS08650 PF00893 Small Multidrug Resistance protein APS58_RS08655 PF00892 EamA-like transporter family APS58_RS08660 PF00672 HAMP domain APS58_RS08660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS08660 PF02203 Tar ligand binding domain homologue APS58_RS08685 PF17760 UvrA interaction domain APS58_RS08685 PF17755 UvrA DNA-binding domain APS58_RS08700 PF07690 Major Facilitator Superfamily APS58_RS08710 PF00436 Single-strand binding protein family APS58_RS08730 PF04143 Sulphur transport APS58_RS08740 PF00753 Metallo-beta-lactamase superfamily APS58_RS08765 PF02652 L-lactate permease APS58_RS08775 PF00293 NUDIX domain APS58_RS08800 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS08805 PF00677 Lumazine binding domain APS58_RS08810 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS08810 PF13188 PAS domain APS58_RS08810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS08810 PF08448 PAS fold APS58_RS08810 PF00072 Response regulator receiver domain APS58_RS08835 PF08546 Ketopantoate reductase PanE/ApbA C terminal APS58_RS08835 PF02558 Ketopantoate reductase PanE/ApbA APS58_RS08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS08865 PF03466 LysR substrate binding domain APS58_RS08870 PF00202 Aminotransferase class-III APS58_RS08880 PF00171 Aldehyde dehydrogenase family APS58_RS08890 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS08890 PF00072 Response regulator receiver domain APS58_RS08895 PF00392 Bacterial regulatory proteins, gntR family APS58_RS08895 PF07729 FCD domain APS58_RS08905 PF02653 Branched-chain amino acid transport system / permease component APS58_RS08910 PF02653 Branched-chain amino acid transport system / permease component APS58_RS08910 PF11862 Domain of unknown function (DUF3382) APS58_RS08915 PF00005 ABC transporter APS58_RS08915 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS08920 PF00005 ABC transporter APS58_RS08925 PF01546 Peptidase family M20/M25/M40 APS58_RS08925 PF07687 Peptidase dimerisation domain APS58_RS08930 PF07364 Metallopeptidase family M81 APS58_RS08930 PF07171 MlrC C-terminus APS58_RS08945 PF01515 Phosphate acetyl/butaryl transferase APS58_RS08945 PF03949 Malic enzyme, NAD binding domain APS58_RS08945 PF00390 Malic enzyme, N-terminal domain APS58_RS08950 PF00545 ribonuclease APS58_RS08960 PF00398 Ribosomal RNA adenine dimethylase APS58_RS08965 PF00639 PPIC-type PPIASE domain APS58_RS08965 PF09312 SurA N-terminal domain APS58_RS08970 PF04453 LPS transport system D APS58_RS08975 PF01636 Phosphotransferase enzyme family APS58_RS08980 PF04452 RNA methyltransferase APS58_RS08995 PF06470 SMC proteins Flexible Hinge Domain APS58_RS08995 PF02463 RecF/RecN/SMC N terminal domain APS58_RS09000 PF07690 Major Facilitator Superfamily APS58_RS09010 PF12833 Helix-turn-helix domain APS58_RS09015 PF00324 Amino acid permease APS58_RS09020 PF06751 Ethanolamine ammonia lyase large subunit (EutB) APS58_RS09025 PF05985 Ethanolamine ammonia-lyase light chain (EutC) APS58_RS09030 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS09040 PF00561 alpha/beta hydrolase fold APS58_RS09045 PF01169 Uncharacterized protein family UPF0016 APS58_RS09050 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) APS58_RS09055 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) APS58_RS09060 PF00106 short chain dehydrogenase APS58_RS09075 PF00571 CBS domain APS58_RS09075 PF01380 SIS domain APS58_RS09080 PF00999 Sodium/hydrogen exchanger family APS58_RS09080 PF02254 TrkA-N domain APS58_RS09080 PF02080 TrkA-C domain APS58_RS09085 PF00156 Phosphoribosyl transferase domain APS58_RS09090 PF00175 Oxidoreductase NAD-binding domain APS58_RS09090 PF00258 Flavodoxin APS58_RS09090 PF00667 FAD binding domain APS58_RS09105 PF10396 GTP-binding protein TrmE N-terminus APS58_RS09105 PF01926 50S ribosome-binding GTPase APS58_RS09105 PF12631 MnmE helical domain APS58_RS09115 PF02096 60Kd inner membrane protein APS58_RS09115 PF14849 YidC periplasmic domain APS58_RS09120 PF01809 Putative membrane protein insertion efficiency factor APS58_RS09125 PF00825 Ribonuclease P APS58_RS09130 PF00468 Ribosomal protein L34 APS58_RS09135 PF08299 Bacterial dnaA protein helix-turn-helix APS58_RS09135 PF00308 Bacterial dnaA protein APS58_RS09135 PF11638 DnaA N-terminal domain APS58_RS09140 PF02767 DNA polymerase III beta subunit, central domain APS58_RS09140 PF02768 DNA polymerase III beta subunit, C-terminal domain APS58_RS09140 PF00712 DNA polymerase III beta subunit, N-terminal domain APS58_RS09145 PF00986 DNA gyrase B subunit, carboxyl terminus APS58_RS09145 PF00204 DNA gyrase B APS58_RS09145 PF01751 Toprim domain APS58_RS09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS09145 PF18053 DNA gyrase B subunit insert domain APS58_RS09165 PF04851 Type III restriction enzyme, res subunit APS58_RS09165 PF00271 Helicase conserved C-terminal domain APS58_RS09165 PF08463 EcoEI R protein C-terminal APS58_RS09165 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) APS58_RS09185 PF02566 OsmC-like protein APS58_RS09195 PF01842 ACT domain APS58_RS09195 PF00742 Homoserine dehydrogenase APS58_RS09195 PF03447 Homoserine dehydrogenase, NAD binding domain APS58_RS09205 PF06733 DEAD_2 APS58_RS09205 PF13307 Helicase C-terminal domain APS58_RS09220 PF11490 DNA polymerase III polC-type N-terminus II APS58_RS09220 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS58_RS09220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS58_RS09220 PF14480 DNA polymerase III polC-type N-terminus I APS58_RS09220 PF14579 Helix-hairpin-helix motif APS58_RS09220 PF02811 PHP domain APS58_RS09220 PF00929 Exonuclease APS58_RS09225 PF00155 Aminotransferase class I and II APS58_RS09225 PF00392 Bacterial regulatory proteins, gntR family APS58_RS09235 PF00682 HMGL-like APS58_RS09235 PF08502 LeuA allosteric (dimerisation) domain APS58_RS09240 PF00877 NlpC/P60 family APS58_RS09245 PF00793 DAHP synthetase I family APS58_RS09250 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS09250 PF00563 EAL domain APS58_RS09250 PF03707 Bacterial signalling protein N terminal repeat APS58_RS09265 PF04381 Putative exonuclease, RdgC APS58_RS09270 PF07670 Nucleoside recognition APS58_RS09295 PF00108 Thiolase, N-terminal domain APS58_RS09295 PF02803 Thiolase, C-terminal domain APS58_RS09300 PF09278 MerR, DNA binding APS58_RS09300 PF00376 MerR family regulatory protein APS58_RS09310 PF00403 Heavy-metal-associated domain APS58_RS09315 PF00672 HAMP domain APS58_RS09315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS09315 PF02203 Tar ligand binding domain homologue APS58_RS09330 PF00873 AcrB/AcrD/AcrF family APS58_RS09335 PF00529 HlyD membrane-fusion protein of T1SS APS58_RS09335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS09345 PF00072 Response regulator receiver domain APS58_RS09345 PF00486 Transcriptional regulatory protein, C terminal APS58_RS09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS09350 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS09370 PF00005 ABC transporter APS58_RS09375 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS09380 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS09380 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS09385 PF03692 Putative zinc- or iron-chelating domain APS58_RS09390 PF03358 NADPH-dependent FMN reductase APS58_RS09395 PF01134 Glucose inhibited division protein A APS58_RS09395 PF13932 GidA associated domain APS58_RS09400 PF02527 rRNA small subunit methyltransferase G APS58_RS09405 PF01810 LysE type translocator APS58_RS09410 PF13614 AAA domain APS58_RS09420 PF02195 ParB-like nuclease domain APS58_RS09420 PF17762 HTH domain found in ParB protein APS58_RS09435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS58_RS09435 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS09450 PF00106 short chain dehydrogenase APS58_RS09455 PF04030 D-arabinono-1,4-lactone oxidase APS58_RS09455 PF01565 FAD binding domain APS58_RS09460 PF01040 UbiA prenyltransferase family APS58_RS09475 PF00135 Carboxylesterase family APS58_RS09480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS58_RS09485 PF01903 CbiX APS58_RS09490 PF02570 Precorrin-8X methylmutase APS58_RS09495 PF01888 CbiD APS58_RS09500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS58_RS09510 PF01890 Cobalamin synthesis G C-terminus APS58_RS09510 PF11760 Cobalamin synthesis G N-terminal APS58_RS09510 PF11761 Cobalamin biosynthesis central region APS58_RS09525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS58_RS09525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS58_RS09545 PF01613 Flavin reductase like domain APS58_RS09570 PF03543 Yersinia/Haemophilus virulence surface antigen APS58_RS09635 PF01565 FAD binding domain APS58_RS09635 PF02913 FAD linked oxidases, C-terminal domain APS58_RS09650 PF01923 Cobalamin adenosyltransferase APS58_RS09655 PF03061 Thioesterase superfamily APS58_RS09660 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain APS58_RS09660 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain APS58_RS09670 PF00860 Permease family APS58_RS09680 PF02203 Tar ligand binding domain homologue APS58_RS09680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS09680 PF00672 HAMP domain APS58_RS09690 PF00132 Bacterial transferase hexapeptide (six repeats) APS58_RS09715 PF12706 Beta-lactamase superfamily domain APS58_RS09720 PF00005 ABC transporter APS58_RS09725 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS09730 PF01494 FAD binding domain APS58_RS09740 PF00171 Aldehyde dehydrogenase family APS58_RS09745 PF01614 Bacterial transcriptional regulator APS58_RS09745 PF09339 IclR helix-turn-helix domain APS58_RS09750 PF01435 Peptidase family M48 APS58_RS09760 PF13193 AMP-binding enzyme C-terminal domain APS58_RS09760 PF00501 AMP-binding enzyme APS58_RS09770 PF00491 Arginase family APS58_RS09775 PF02423 Ornithine cyclodeaminase/mu-crystallin family APS58_RS09785 PF01066 CDP-alcohol phosphatidyltransferase APS58_RS09790 PF03421 YopJ Serine/Threonine acetyltransferase APS58_RS09795 PF05209 Septum formation inhibitor MinC, N-terminal domain APS58_RS09795 PF03775 Septum formation inhibitor MinC, C-terminal domain APS58_RS09800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS58_RS09805 PF03776 Septum formation topological specificity factor MinE APS58_RS09810 PF01613 Flavin reductase like domain APS58_RS09815 PF00561 alpha/beta hydrolase fold APS58_RS09825 PF02525 Flavodoxin-like fold APS58_RS09830 PF01266 FAD dependent oxidoreductase APS58_RS09835 PF03466 LysR substrate binding domain APS58_RS09835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS09840 PF00440 Bacterial regulatory proteins, tetR family APS58_RS09845 PF00582 Universal stress protein family APS58_RS09855 PF03466 LysR substrate binding domain APS58_RS09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS09865 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain APS58_RS09865 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain APS58_RS09870 PF06508 Queuosine biosynthesis protein QueC APS58_RS09875 PF04349 Periplasmic glucan biosynthesis protein, MdoG APS58_RS09880 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS09880 PF13291 ACT domain APS58_RS09890 PF18158 Adaptive response protein AidB N-terminal domain APS58_RS09890 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS09890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS09895 PF03466 LysR substrate binding domain APS58_RS09900 PF07883 Cupin domain APS58_RS09905 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS58_RS09910 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS09910 PF14497 Glutathione S-transferase, C-terminal domain APS58_RS09915 PF07690 Major Facilitator Superfamily APS58_RS09925 PF02423 Ornithine cyclodeaminase/mu-crystallin family APS58_RS09945 PF03922 OmpW family APS58_RS09955 PF00176 SNF2 family N-terminal domain APS58_RS09955 PF00271 Helicase conserved C-terminal domain APS58_RS09965 PF18273 Type III R-M EcoP15I C-terminal domain APS58_RS09965 PF01555 DNA methylase APS58_RS09980 PF04851 Type III restriction enzyme, res subunit APS58_RS09980 PF08774 VRR-NUC domain APS58_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS09985 PF03466 LysR substrate binding domain APS58_RS09990 PF00970 Oxidoreductase FAD-binding domain APS58_RS09990 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS09990 PF00175 Oxidoreductase NAD-binding domain APS58_RS09995 PF00355 Rieske [2Fe-2S] domain APS58_RS09995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) APS58_RS10000 PF13577 SnoaL-like domain APS58_RS10005 PF00355 Rieske [2Fe-2S] domain APS58_RS10010 PF02203 Tar ligand binding domain homologue APS58_RS10010 PF00672 HAMP domain APS58_RS10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS10015 PF07690 Major Facilitator Superfamily APS58_RS10030 PF00072 Response regulator receiver domain APS58_RS10030 PF00158 Sigma-54 interaction domain APS58_RS10030 PF02954 Bacterial regulatory protein, Fis family APS58_RS10035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS10035 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS10040 PF02965 Vitamin B12 dependent methionine synthase, activation domain APS58_RS10040 PF02607 B12 binding domain APS58_RS10040 PF02310 B12 binding domain APS58_RS10040 PF02574 Homocysteine S-methyltransferase APS58_RS10040 PF00809 Pterin binding enzyme APS58_RS10045 PF03466 LysR substrate binding domain APS58_RS10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS10050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS10050 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS10050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS10060 PF02515 CoA-transferase family III APS58_RS10065 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS10070 PF09382 RQC domain APS58_RS10070 PF00570 HRDC domain APS58_RS10070 PF00271 Helicase conserved C-terminal domain APS58_RS10070 PF00270 DEAD/DEAH box helicase APS58_RS10070 PF16124 RecQ zinc-binding APS58_RS10105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APS58_RS10105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APS58_RS10115 PF03976 Polyphosphate kinase 2 (PPK2) APS58_RS10120 PF01425 Amidase APS58_RS10125 PF00593 TonB dependent receptor APS58_RS10125 PF07715 TonB-dependent Receptor Plug Domain APS58_RS10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS10155 PF03466 LysR substrate binding domain APS58_RS10155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS10160 PF13378 Enolase C-terminal domain-like APS58_RS10160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS58_RS10165 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS10190 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS10200 PF04115 Ureidoglycolate lyase APS58_RS10205 PF00005 ABC transporter APS58_RS10210 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS10215 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS10225 PF00392 Bacterial regulatory proteins, gntR family APS58_RS10225 PF07729 FCD domain APS58_RS10240 PF02965 Vitamin B12 dependent methionine synthase, activation domain APS58_RS10240 PF02574 Homocysteine S-methyltransferase APS58_RS10240 PF02607 B12 binding domain APS58_RS10240 PF02310 B12 binding domain APS58_RS10240 PF00809 Pterin binding enzyme APS58_RS10255 PF01204 Trehalase APS58_RS10270 PF05506 Domain of unknown function (DUF756) APS58_RS10270 PF04185 Phosphoesterase family APS58_RS10275 PF03707 Bacterial signalling protein N terminal repeat APS58_RS10275 PF00563 EAL domain APS58_RS10275 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS10295 PF00970 Oxidoreductase FAD-binding domain APS58_RS10295 PF00175 Oxidoreductase NAD-binding domain APS58_RS10300 PF03466 LysR substrate binding domain APS58_RS10300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS10310 PF00672 HAMP domain APS58_RS10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS10310 PF02203 Tar ligand binding domain homologue APS58_RS10315 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS10320 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS10325 PF00158 Sigma-54 interaction domain APS58_RS10325 PF00072 Response regulator receiver domain APS58_RS10325 PF02954 Bacterial regulatory protein, Fis family APS58_RS10330 PF01078 Magnesium chelatase, subunit ChlI APS58_RS10330 PF13335 Magnesium chelatase, subunit ChlI C-terminal APS58_RS10340 PF00543 Nitrogen regulatory protein P-II APS58_RS10345 PF00909 Ammonium Transporter Family APS58_RS10350 PF08450 SMP-30/Gluconolactonase/LRE-like region APS58_RS10385 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS10385 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS10390 PF01565 FAD binding domain APS58_RS10400 PF13183 4Fe-4S dicluster domain APS58_RS10400 PF02754 Cysteine-rich domain APS58_RS10430 PF00255 Glutathione peroxidase APS58_RS10440 PF07690 Major Facilitator Superfamily APS58_RS10445 PF00842 Alanine racemase, C-terminal domain APS58_RS10445 PF01168 Alanine racemase, N-terminal domain APS58_RS10455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS58_RS10465 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS10475 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS10475 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS10480 PF08546 Ketopantoate reductase PanE/ApbA C terminal APS58_RS10480 PF02558 Ketopantoate reductase PanE/ApbA APS58_RS10490 PF18073 Rubredoxin metal binding domain APS58_RS10500 PF01063 Amino-transferase class IV APS58_RS10525 PF00535 Glycosyl transferase family 2 APS58_RS10535 PF03060 Nitronate monooxygenase APS58_RS10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS10540 PF03466 LysR substrate binding domain APS58_RS10545 PF06779 Uncharacterised MFS-type transporter YbfB APS58_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS10550 PF00672 HAMP domain APS58_RS10550 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS10560 PF00072 Response regulator receiver domain APS58_RS10560 PF00486 Transcriptional regulatory protein, C terminal APS58_RS10565 PF07690 Major Facilitator Superfamily APS58_RS10585 PF01435 Peptidase family M48 APS58_RS10590 PF00939 Sodium:sulfate symporter transmembrane region APS58_RS10595 PF00753 Metallo-beta-lactamase superfamily APS58_RS10615 PF03466 LysR substrate binding domain APS58_RS10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS10620 PF07690 Major Facilitator Superfamily APS58_RS10625 PF00248 Aldo/keto reductase family APS58_RS10630 PF03372 Endonuclease/Exonuclease/phosphatase family APS58_RS10635 PF00156 Phosphoribosyl transferase domain APS58_RS10645 PF02934 GatB/GatE catalytic domain APS58_RS10645 PF02637 GatB domain APS58_RS10650 PF01425 Amidase APS58_RS10655 PF02686 Glu-tRNAGln amidotransferase C subunit APS58_RS10670 PF04093 rod shape-determining protein MreD APS58_RS10675 PF03717 Penicillin-binding Protein dimerisation domain APS58_RS10675 PF00905 Penicillin binding protein transpeptidase domain APS58_RS10685 PF00005 ABC transporter APS58_RS10690 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS10695 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS10700 PF03313 Serine dehydratase alpha chain APS58_RS10700 PF03315 Serine dehydratase beta chain APS58_RS10705 PF03466 LysR substrate binding domain APS58_RS10705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS10710 PF01925 Sulfite exporter TauE/SafE APS58_RS10715 PF05199 GMC oxidoreductase APS58_RS10715 PF00732 GMC oxidoreductase APS58_RS10720 PF02405 Permease MlaE APS58_RS10725 PF00005 ABC transporter APS58_RS10745 PF01507 Phosphoadenosine phosphosulfate reductase family APS58_RS10750 PF05532 CsbD-like APS58_RS10770 PF06123 Inner membrane protein CreD APS58_RS10775 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS10775 PF00672 HAMP domain APS58_RS10780 PF00072 Response regulator receiver domain APS58_RS10780 PF00486 Transcriptional regulatory protein, C terminal APS58_RS10785 PF01914 MarC family integral membrane protein APS58_RS10795 PF01738 Dienelactone hydrolase family APS58_RS10800 PF07690 Major Facilitator Superfamily APS58_RS10805 PF00529 HlyD membrane-fusion protein of T1SS APS58_RS10805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS10810 PF02321 Outer membrane efflux protein APS58_RS10815 PF01047 MarR family APS58_RS10820 PF00958 GMP synthase C terminal domain APS58_RS10820 PF00117 Glutamine amidotransferase class-I APS58_RS10820 PF02540 NAD synthase APS58_RS10825 PF01544 CorA-like Mg2+ transporter protein APS58_RS10830 PF00490 Delta-aminolevulinic acid dehydratase APS58_RS10835 PF03653 Uncharacterised protein family (UPF0093) APS58_RS10850 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APS58_RS10855 PF07943 Penicillin-binding protein 5, C-terminal domain APS58_RS10855 PF00768 D-alanyl-D-alanine carboxypeptidase APS58_RS10860 PF00164 Ribosomal protein S12/S23 APS58_RS10865 PF00177 Ribosomal protein S7p/S5e APS58_RS10870 PF03144 Elongation factor Tu domain 2 APS58_RS10870 PF03764 Elongation factor G, domain IV APS58_RS10870 PF14492 Elongation Factor G, domain II APS58_RS10870 PF00679 Elongation factor G C-terminus APS58_RS10870 PF00009 Elongation factor Tu GTP binding domain APS58_RS10875 PF00009 Elongation factor Tu GTP binding domain APS58_RS10875 PF03144 Elongation factor Tu domain 2 APS58_RS10875 PF03143 Elongation factor Tu C-terminal domain APS58_RS10880 PF00338 Ribosomal protein S10p/S20e APS58_RS10885 PF00297 Ribosomal protein L3 APS58_RS10890 PF00573 Ribosomal protein L4/L1 family APS58_RS10895 PF00276 Ribosomal protein L23 APS58_RS10900 PF03947 Ribosomal Proteins L2, C-terminal domain APS58_RS10900 PF00181 Ribosomal Proteins L2, RNA binding domain APS58_RS10905 PF00203 Ribosomal protein S19 APS58_RS10910 PF00237 Ribosomal protein L22p/L17e APS58_RS10915 PF07650 KH domain APS58_RS10915 PF00189 Ribosomal protein S3, C-terminal domain APS58_RS10920 PF00252 Ribosomal protein L16p/L10e APS58_RS10925 PF00831 Ribosomal L29 protein APS58_RS10930 PF00366 Ribosomal protein S17 APS58_RS10935 PF08534 Redoxin APS58_RS10945 PF00578 AhpC/TSA family APS58_RS10960 PF00381 PTS HPr component phosphorylation site APS58_RS10965 PF02896 PEP-utilising enzyme, TIM barrel domain APS58_RS10965 PF00391 PEP-utilising enzyme, mobile domain APS58_RS10965 PF05524 PEP-utilising enzyme, N-terminal APS58_RS10980 PF03814 Potassium-transporting ATPase A subunit APS58_RS10990 PF02669 K+-transporting ATPase, c chain APS58_RS10995 PF02702 Osmosensitive K+ channel His kinase sensor domain APS58_RS10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS10995 PF13492 GAF domain APS58_RS10995 PF13493 Domain of unknown function (DUF4118) APS58_RS10995 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS11000 PF00072 Response regulator receiver domain APS58_RS11000 PF00486 Transcriptional regulatory protein, C terminal APS58_RS11015 PF04055 Radical SAM superfamily APS58_RS11015 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family APS58_RS11020 PF03099 Biotin/lipoate A/B protein ligase family APS58_RS11025 PF04359 Protein of unknown function (DUF493) APS58_RS11035 PF00119 ATP synthase A chain APS58_RS11040 PF00137 ATP synthase subunit C APS58_RS11045 PF00430 ATP synthase B/B' CF(0) APS58_RS11050 PF00213 ATP synthase delta (OSCP) subunit APS58_RS11055 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS58_RS11055 PF00306 ATP synthase alpha/beta chain, C terminal domain APS58_RS11055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS58_RS11060 PF00231 ATP synthase APS58_RS11065 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS58_RS11065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS58_RS11070 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APS58_RS11080 PF04679 ATP dependent DNA ligase C terminal region APS58_RS11080 PF01068 ATP dependent DNA ligase domain APS58_RS11080 PF04675 DNA ligase N terminus APS58_RS11085 PF00270 DEAD/DEAH box helicase APS58_RS11085 PF00271 Helicase conserved C-terminal domain APS58_RS11085 PF08494 DEAD/H associated APS58_RS11135 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS58_RS11140 PF01344 Kelch motif APS58_RS11145 PF02321 Outer membrane efflux protein APS58_RS11150 PF00873 AcrB/AcrD/AcrF family APS58_RS11155 PF00529 HlyD membrane-fusion protein of T1SS APS58_RS11155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS58_RS11160 PF00440 Bacterial regulatory proteins, tetR family APS58_RS11160 PF08361 MAATS-type transcriptional repressor, C-terminal region APS58_RS11225 PF00589 Phage integrase family APS58_RS11235 PF13230 Glutamine amidotransferases class-II APS58_RS11240 PF07690 Major Facilitator Superfamily APS58_RS11245 PF01361 Tautomerase enzyme APS58_RS11255 PF00672 HAMP domain APS58_RS11255 PF02203 Tar ligand binding domain homologue APS58_RS11255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS11260 PF01274 Malate synthase APS58_RS11265 PF03466 LysR substrate binding domain APS58_RS11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS11275 PF01011 PQQ enzyme repeat APS58_RS11290 PF00750 tRNA synthetases class I (R) APS58_RS11290 PF05746 DALR anticodon binding domain APS58_RS11290 PF03485 Arginyl tRNA synthetase N terminal domain APS58_RS11300 PF00085 Thioredoxin APS58_RS11300 PF01323 DSBA-like thioredoxin domain APS58_RS11310 PF00005 ABC transporter APS58_RS11315 PF00309 Sigma-54 factor, Activator interacting domain (AID) APS58_RS11315 PF04963 Sigma-54 factor, core binding domain APS58_RS11315 PF04552 Sigma-54, DNA binding domain APS58_RS11320 PF03073 TspO/MBR family APS58_RS11325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS11325 PF02743 Cache domain APS58_RS11325 PF00672 HAMP domain APS58_RS11330 PF02926 THUMP domain APS58_RS11330 PF01170 Putative RNA methylase family UPF0020 APS58_RS11340 PF06472 ABC transporter transmembrane region 2 APS58_RS11340 PF00005 ABC transporter APS58_RS11350 PF01043 SecA preprotein cross-linking domain APS58_RS11350 PF07517 SecA DEAD-like domain APS58_RS11350 PF07516 SecA Wing and Scaffold domain APS58_RS11350 PF02810 SEC-C motif APS58_RS11355 PF01740 STAS domain APS58_RS11355 PF00916 Sulfate permease family APS58_RS11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS11360 PF02203 Tar ligand binding domain homologue APS58_RS11360 PF00672 HAMP domain APS58_RS11365 PF02464 Competence-damaged protein APS58_RS11370 PF04608 Phosphatidylglycerophosphatase A APS58_RS11380 PF02769 AIR synthase related protein, C-terminal domain APS58_RS11380 PF00586 AIR synthase related protein, N-terminal domain APS58_RS11390 PF04107 Glutamate-cysteine ligase family 2(GCS2) APS58_RS11405 PF04379 ApaG domain APS58_RS11410 PF00834 Ribulose-phosphate 3 epimerase family APS58_RS11420 PF13419 Haloacid dehalogenase-like hydrolase APS58_RS11430 PF04715 Anthranilate synthase component I, N terminal region APS58_RS11430 PF00425 chorismate binding enzyme APS58_RS11440 PF12833 Helix-turn-helix domain APS58_RS11460 PF01313 Bacterial export proteins, family 3 APS58_RS11465 PF00813 FliP family APS58_RS11480 PF00771 FHIPEP family APS58_RS11485 PF01312 FlhB HrpN YscU SpaS Family APS58_RS11505 PF03211 Pectate lyase APS58_RS11535 PF18269 T3SS EscN ATPase C-terminal domain APS58_RS11535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS58_RS11535 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS58_RS11550 PF01514 Secretory protein of YscJ/FliF family APS58_RS11600 PF00263 Bacterial type II and III secretion system protein APS58_RS11600 PF03958 Bacterial type II/III secretion system short domain APS58_RS11605 PF13847 Methyltransferase domain APS58_RS11605 PF10119 Predicted methyltransferase regulatory domain APS58_RS11610 PF01464 Transglycosylase SLT domain APS58_RS11610 PF10145 Phage-related minor tail protein APS58_RS11610 PF01551 Peptidase family M23 APS58_RS11635 PF00117 Glutamine amidotransferase class-I APS58_RS11640 PF01810 LysE type translocator APS58_RS11645 PF02885 Glycosyl transferase family, helical bundle domain APS58_RS11645 PF00591 Glycosyl transferase family, a/b domain APS58_RS11650 PF00218 Indole-3-glycerol phosphate synthase APS58_RS11655 PF03167 Uracil DNA glycosylase superfamily APS58_RS11675 PF02547 Queuosine biosynthesis protein APS58_RS11690 PF11871 Domain of unknown function (DUF3391) APS58_RS11690 PF01966 HD domain APS58_RS11695 PF17191 RecG wedge domain APS58_RS11695 PF00271 Helicase conserved C-terminal domain APS58_RS11695 PF00270 DEAD/DEAH box helicase APS58_RS11700 PF03466 LysR substrate binding domain APS58_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS11705 PF00210 Ferritin-like domain APS58_RS11710 PF01040 UbiA prenyltransferase family APS58_RS11725 PF00535 Glycosyl transferase family 2 APS58_RS11735 PF14748 Pyrroline-5-carboxylate reductase dimerisation APS58_RS11735 PF03807 NADP oxidoreductase coenzyme F420-dependent APS58_RS11740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS58_RS11740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS58_RS11745 PF00455 DeoR C terminal sensor domain APS58_RS11745 PF08220 DeoR-like helix-turn-helix domain APS58_RS11750 PF17912 MalK OB fold domain APS58_RS11750 PF00005 ABC transporter APS58_RS11755 PF08402 TOBE domain APS58_RS11755 PF00005 ABC transporter APS58_RS11760 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS11765 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS11780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase APS58_RS11780 PF01266 FAD dependent oxidoreductase APS58_RS11785 PF00238 Ribosomal protein L14p/L23e APS58_RS11790 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APS58_RS11795 PF00281 Ribosomal protein L5 APS58_RS11795 PF00673 ribosomal L5P family C-terminus APS58_RS11800 PF00253 Ribosomal protein S14p/S29e APS58_RS11805 PF00410 Ribosomal protein S8 APS58_RS11810 PF00347 Ribosomal protein L6 APS58_RS11815 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APS58_RS11820 PF03719 Ribosomal protein S5, C-terminal domain APS58_RS11820 PF00333 Ribosomal protein S5, N-terminal domain APS58_RS11825 PF00327 Ribosomal protein L30p/L7e APS58_RS11830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APS58_RS11835 PF00344 SecY translocase APS58_RS11840 PF00444 Ribosomal protein L36 APS58_RS11845 PF00416 Ribosomal protein S13/S18 APS58_RS11850 PF00411 Ribosomal protein S11 APS58_RS11855 PF00163 Ribosomal protein S4/S9 N-terminal domain APS58_RS11855 PF01479 S4 domain APS58_RS11860 PF01000 RNA polymerase Rpb3/RpoA insert domain APS58_RS11860 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APS58_RS11860 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APS58_RS11865 PF01196 Ribosomal protein L17 APS58_RS11875 PF00012 Hsp70 protein APS58_RS11880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS58_RS11885 PF02021 Uncharacterised protein family UPF0102 APS58_RS11890 PF13580 SIS domain APS58_RS11895 PF04972 BON domain APS58_RS11900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS58_RS11900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS58_RS11905 PF00437 Type II/IV secretion system protein APS58_RS11910 PF00027 Cyclic nucleotide-binding domain APS58_RS11910 PF13545 Crp-like helix-turn-helix domain APS58_RS11915 PF00437 Type II/IV secretion system protein APS58_RS11920 PF01168 Alanine racemase, N-terminal domain APS58_RS11925 PF01212 Beta-eliminating lyase APS58_RS11935 PF04286 Protein of unknown function (DUF445) APS58_RS11955 PF02913 FAD linked oxidases, C-terminal domain APS58_RS11955 PF01565 FAD binding domain APS58_RS11965 PF03466 LysR substrate binding domain APS58_RS11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS11970 PF00551 Formyl transferase APS58_RS11975 PF00563 EAL domain APS58_RS11975 PF03707 Bacterial signalling protein N terminal repeat APS58_RS11975 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS11985 PF02308 MgtC family APS58_RS11995 PF00672 HAMP domain APS58_RS11995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS11995 PF07730 Histidine kinase APS58_RS11995 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APS58_RS12000 PF00072 Response regulator receiver domain APS58_RS12000 PF00196 Bacterial regulatory proteins, luxR family APS58_RS12015 PF00593 TonB dependent receptor APS58_RS12015 PF07715 TonB-dependent Receptor Plug Domain APS58_RS12025 PF07690 Major Facilitator Superfamily APS58_RS12030 PF07690 Major Facilitator Superfamily APS58_RS12035 PF01568 Molydopterin dinucleotide binding domain APS58_RS12035 PF14710 Respiratory nitrate reductase alpha N-terminal APS58_RS12035 PF00384 Molybdopterin oxidoreductase APS58_RS12040 PF13247 4Fe-4S dicluster domain APS58_RS12040 PF14711 Respiratory nitrate reductase beta C-terminal APS58_RS12045 PF02613 Nitrate reductase delta subunit APS58_RS12050 PF02665 Nitrate reductase gamma subunit APS58_RS12055 PF09312 SurA N-terminal domain APS58_RS12055 PF00639 PPIC-type PPIASE domain APS58_RS12060 PF00484 Carbonic anhydrase APS58_RS12065 PF00317 Ribonucleotide reductase, all-alpha domain APS58_RS12065 PF02867 Ribonucleotide reductase, barrel domain APS58_RS12065 PF03477 ATP cone domain APS58_RS12075 PF01814 Hemerythrin HHE cation binding domain APS58_RS12080 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family APS58_RS12090 PF07690 Major Facilitator Superfamily APS58_RS12120 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS12130 PF00563 EAL domain APS58_RS12130 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS12130 PF13185 GAF domain APS58_RS12135 PF03006 Haemolysin-III related APS58_RS12155 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS12155 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS12195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS58_RS12200 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component APS58_RS12210 PF00920 Dehydratase family APS58_RS12215 PF03480 Bacterial extracellular solute-binding protein, family 7 APS58_RS12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS12220 PF03466 LysR substrate binding domain APS58_RS12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS12225 PF03466 LysR substrate binding domain APS58_RS12230 PF17954 Quercetinase C-terminal cupin domain APS58_RS12230 PF02678 Pirin APS58_RS12235 PF00857 Isochorismatase family APS58_RS12240 PF07969 Amidohydrolase family APS58_RS12250 PF07690 Major Facilitator Superfamily APS58_RS12275 PF00384 Molybdopterin oxidoreductase APS58_RS12275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS58_RS12275 PF01568 Molydopterin dinucleotide binding domain APS58_RS12285 PF07687 Peptidase dimerisation domain APS58_RS12285 PF01546 Peptidase family M20/M25/M40 APS58_RS12290 PF01546 Peptidase family M20/M25/M40 APS58_RS12290 PF07687 Peptidase dimerisation domain APS58_RS12300 PF00672 HAMP domain APS58_RS12300 PF02203 Tar ligand binding domain homologue APS58_RS12300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS12315 PF00117 Glutamine amidotransferase class-I APS58_RS12315 PF03352 Methyladenine glycosylase APS58_RS12315 PF13302 Acetyltransferase (GNAT) domain APS58_RS12315 PF13673 Acetyltransferase (GNAT) domain APS58_RS12315 PF00958 GMP synthase C terminal domain APS58_RS12330 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS12335 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS12340 PF00501 AMP-binding enzyme APS58_RS12340 PF14535 AMP-binding enzyme C-terminal domain APS58_RS12345 PF00005 ABC transporter APS58_RS12355 PF02653 Branched-chain amino acid transport system / permease component APS58_RS12355 PF11862 Domain of unknown function (DUF3382) APS58_RS12360 PF02653 Branched-chain amino acid transport system / permease component APS58_RS12365 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS12365 PF00005 ABC transporter APS58_RS12370 PF00501 AMP-binding enzyme APS58_RS12380 PF16537 Type II secretion system protein B APS58_RS12395 PF05987 Bacterial protein of unknown function (DUF898) APS58_RS12400 PF00849 RNA pseudouridylate synthase APS58_RS12400 PF01479 S4 domain APS58_RS12410 PF01494 FAD binding domain APS58_RS12430 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS12435 PF01678 Diaminopimelate epimerase APS58_RS12445 PF00589 Phage integrase family APS58_RS12445 PF02899 Phage integrase, N-terminal SAM-like domain APS58_RS12450 PF02638 Glycosyl hydrolase-like 10 APS58_RS12455 PF00672 HAMP domain APS58_RS12455 PF12729 Four helix bundle sensory module for signal transduction APS58_RS12455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS12465 PF10672 S-adenosylmethionine-dependent methyltransferase APS58_RS12465 PF17785 PUA-like domain APS58_RS12470 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS12470 PF13426 PAS domain APS58_RS12470 PF08448 PAS fold APS58_RS12470 PF08447 PAS fold APS58_RS12470 PF00563 EAL domain APS58_RS12470 PF05231 MASE1 APS58_RS12475 PF07683 Cobalamin synthesis protein cobW C-terminal domain APS58_RS12475 PF02492 CobW/HypB/UreG, nucleotide-binding domain APS58_RS12480 PF01258 Prokaryotic dksA/traR C4-type zinc finger APS58_RS12490 PF00227 Proteasome subunit APS58_RS12495 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS12495 PF07724 AAA domain (Cdc48 subfamily) APS58_RS12500 PF02381 MraZ protein, putative antitoxin-like APS58_RS12505 PF01795 MraW methylase family APS58_RS12510 PF04999 Cell division protein FtsL APS58_RS12515 PF00905 Penicillin binding protein transpeptidase domain APS58_RS12515 PF03717 Penicillin-binding Protein dimerisation domain APS58_RS12520 PF02875 Mur ligase family, glutamate ligase domain APS58_RS12520 PF08245 Mur ligase middle domain APS58_RS12525 PF01225 Mur ligase family, catalytic domain APS58_RS12525 PF02875 Mur ligase family, glutamate ligase domain APS58_RS12525 PF08245 Mur ligase middle domain APS58_RS12530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APS58_RS12530 PF00953 Glycosyl transferase family 4 APS58_RS12535 PF02875 Mur ligase family, glutamate ligase domain APS58_RS12535 PF08245 Mur ligase middle domain APS58_RS12540 PF01098 Cell cycle protein APS58_RS12545 PF03033 Glycosyltransferase family 28 N-terminal domain APS58_RS12545 PF04101 Glycosyltransferase family 28 C-terminal domain APS58_RS12550 PF08245 Mur ligase middle domain APS58_RS12550 PF02875 Mur ligase family, glutamate ligase domain APS58_RS12550 PF01225 Mur ligase family, catalytic domain APS58_RS12555 PF07478 D-ala D-ala ligase C-terminus APS58_RS12555 PF01820 D-ala D-ala ligase N-terminus APS58_RS12560 PF08478 POTRA domain, FtsQ-type APS58_RS12560 PF03799 Cell division protein FtsQ APS58_RS12565 PF02491 SHS2 domain inserted in FTSA APS58_RS12570 PF12327 FtsZ family, C-terminal domain APS58_RS12570 PF00091 Tubulin/FtsZ family, GTPase domain APS58_RS12575 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APS58_RS12580 PF13667 ThiC-associated domain APS58_RS12580 PF01964 Radical SAM ThiC family APS58_RS12585 PF00672 HAMP domain APS58_RS12585 PF16591 Helical bimodular sensor domain APS58_RS12585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS12590 PF00672 HAMP domain APS58_RS12590 PF02203 Tar ligand binding domain homologue APS58_RS12590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS12600 PF02075 Crossover junction endodeoxyribonuclease RuvC APS58_RS12615 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS12625 PF03328 HpcH/HpaI aldolase/citrate lyase family APS58_RS12630 PF09339 IclR helix-turn-helix domain APS58_RS12630 PF01614 Bacterial transcriptional regulator APS58_RS12635 PF00912 Transglycosylase APS58_RS12640 PF01488 Shikimate / quinate 5-dehydrogenase APS58_RS12640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APS58_RS12640 PF08501 Shikimate dehydrogenase substrate binding domain APS58_RS12650 PF00773 RNB domain APS58_RS12660 PF05728 Uncharacterised protein family (UPF0227) APS58_RS12665 PF01098 Cell cycle protein APS58_RS12670 PF01425 Amidase APS58_RS12675 PF01523 Putative modulator of DNA gyrase APS58_RS12685 PF00793 DAHP synthetase I family APS58_RS12695 PF02875 Mur ligase family, glutamate ligase domain APS58_RS12695 PF01225 Mur ligase family, catalytic domain APS58_RS12695 PF08245 Mur ligase middle domain APS58_RS12705 PF08534 Redoxin APS58_RS12710 PF00364 Biotin-requiring enzyme APS58_RS12715 PF02785 Biotin carboxylase C-terminal domain APS58_RS12715 PF00289 Biotin carboxylase, N-terminal domain APS58_RS12715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS58_RS12730 PF00294 pfkB family carbohydrate kinase APS58_RS12740 PF00268 Ribonucleotide reductase, small chain APS58_RS12745 PF00317 Ribonucleotide reductase, all-alpha domain APS58_RS12745 PF03477 ATP cone domain APS58_RS12745 PF02867 Ribonucleotide reductase, barrel domain APS58_RS12750 PF01510 N-acetylmuramoyl-L-alanine amidase APS58_RS12755 PF02954 Bacterial regulatory protein, Fis family APS58_RS12755 PF00158 Sigma-54 interaction domain APS58_RS12755 PF00072 Response regulator receiver domain APS58_RS12760 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS12775 PF02978 Signal peptide binding domain APS58_RS12775 PF02881 SRP54-type protein, helical bundle domain APS58_RS12775 PF00448 SRP54-type protein, GTPase domain APS58_RS12780 PF00535 Glycosyl transferase family 2 APS58_RS12785 PF00158 Sigma-54 interaction domain APS58_RS12785 PF00072 Response regulator receiver domain APS58_RS12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS12795 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS12800 PF00919 Uncharacterized protein family UPF0004 APS58_RS12800 PF01938 TRAM domain APS58_RS12800 PF04055 Radical SAM superfamily APS58_RS12820 PF00296 Luciferase-like monooxygenase APS58_RS12825 PF03358 NADPH-dependent FMN reductase APS58_RS12830 PF00158 Sigma-54 interaction domain APS58_RS12835 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS12845 PF13098 Thioredoxin-like domain APS58_RS12845 PF10411 Disulfide bond isomerase protein N-terminus APS58_RS12850 PF01494 FAD binding domain APS58_RS12855 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS12855 PF03476 MOSC N-terminal beta barrel domain APS58_RS12855 PF03473 MOSC domain APS58_RS12860 PF01926 50S ribosome-binding GTPase APS58_RS12860 PF06071 Protein of unknown function (DUF933) APS58_RS12875 PF00571 CBS domain APS58_RS12875 PF00005 ABC transporter APS58_RS12880 PF00892 EamA-like transporter family APS58_RS12885 PF09335 SNARE associated Golgi protein APS58_RS12890 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS12895 PF01207 Dihydrouridine synthase (Dus) APS58_RS12900 PF02954 Bacterial regulatory protein, Fis family APS58_RS12905 PF01808 AICARFT/IMPCHase bienzyme APS58_RS12905 PF02142 MGS-like domain APS58_RS12915 PF00202 Aminotransferase class-III APS58_RS12920 PF08543 Phosphomethylpyrimidine kinase APS58_RS12920 PF02581 Thiamine monophosphate synthase APS58_RS12920 PF03070 TENA/THI-4/PQQC family APS58_RS12925 PF00301 Rubredoxin APS58_RS12930 PF00072 Response regulator receiver domain APS58_RS12935 PF00072 Response regulator receiver domain APS58_RS12940 PF01584 CheW-like domain APS58_RS12945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS12945 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APS58_RS12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS12950 PF09078 CheY binding APS58_RS12950 PF01584 CheW-like domain APS58_RS12950 PF01627 Hpt domain APS58_RS12950 PF02895 Signal transducing histidine kinase, homodimeric domain APS58_RS12955 PF03441 FAD binding domain of DNA photolyase APS58_RS12955 PF00875 DNA photolyase APS58_RS12960 PF02622 Uncharacterized ACR, COG1678 APS58_RS12965 PF03652 Holliday junction resolvase APS58_RS12970 PF00156 Phosphoribosyl transferase domain APS58_RS12975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS58_RS12975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS58_RS12980 PF01979 Amidohydrolase family APS58_RS12985 PF01553 Acyltransferase APS58_RS12995 PF00005 ABC transporter APS58_RS12995 PF08402 TOBE domain APS58_RS13000 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS13005 PF03960 ArsC family APS58_RS13010 PF00437 Type II/IV secretion system protein APS58_RS13015 PF03958 Bacterial type II/III secretion system short domain APS58_RS13015 PF00263 Bacterial type II and III secretion system protein APS58_RS13040 PF07963 Prokaryotic N-terminal methylation motif APS58_RS13040 PF11612 Type II secretion system (T2SS), protein J APS58_RS13045 PF02501 Type II secretion system (T2SS), protein I APS58_RS13045 PF07963 Prokaryotic N-terminal methylation motif APS58_RS13050 PF12019 Type II transport protein GspH APS58_RS13055 PF08334 Type II secretion system (T2SS), protein G APS58_RS13055 PF07963 Prokaryotic N-terminal methylation motif APS58_RS13070 PF02654 Cobalamin-5-phosphate synthase APS58_RS13075 PF00585 C-terminal regulatory domain of Threonine dehydratase APS58_RS13075 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS13080 PF02566 OsmC-like protein APS58_RS13085 PF03232 Ubiquinone biosynthesis protein COQ7 APS58_RS13090 PF13609 Gram-negative porin APS58_RS13095 PF00267 Gram-negative porin APS58_RS13100 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS13105 PF07687 Peptidase dimerisation domain APS58_RS13105 PF01546 Peptidase family M20/M25/M40 APS58_RS13110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS58_RS13115 PF12911 N-terminal TM domain of oligopeptide transport permease C APS58_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS13120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS58_RS13120 PF00005 ABC transporter APS58_RS13125 PF00005 ABC transporter APS58_RS13125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS58_RS13130 PF02203 Tar ligand binding domain homologue APS58_RS13130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS13130 PF00672 HAMP domain APS58_RS13135 PF01380 SIS domain APS58_RS13135 PF01418 Helix-turn-helix domain, rpiR family APS58_RS13135 PF02685 Glucokinase APS58_RS13145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APS58_RS13145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APS58_RS13155 PF00342 Phosphoglucose isomerase APS58_RS13160 PF00118 TCP-1/cpn60 chaperonin family APS58_RS13165 PF00166 Chaperonin 10 Kd subunit APS58_RS13175 PF01050 Mannose-6-phosphate isomerase APS58_RS13175 PF00483 Nucleotidyl transferase APS58_RS13180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS58_RS13180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS58_RS13180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS58_RS13185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS58_RS13185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS58_RS13190 PF00132 Bacterial transferase hexapeptide (six repeats) APS58_RS13200 PF02350 UDP-N-acetylglucosamine 2-epimerase APS58_RS13205 PF01061 ABC-2 type transporter APS58_RS13210 PF00005 ABC transporter APS58_RS13210 PF14524 Wzt C-terminal domain APS58_RS13215 PF13649 Methyltransferase domain APS58_RS13220 PF00534 Glycosyl transferases group 1 APS58_RS13220 PF13439 Glycosyltransferase Family 4 APS58_RS13230 PF13537 Glutamine amidotransferase domain APS58_RS13230 PF00733 Asparagine synthase APS58_RS13240 PF13537 Glutamine amidotransferase domain APS58_RS13240 PF00733 Asparagine synthase APS58_RS13260 PF00535 Glycosyl transferase family 2 APS58_RS13270 PF08362 YcdC-like protein, C-terminal region APS58_RS13270 PF00440 Bacterial regulatory proteins, tetR family APS58_RS13275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS58_RS13275 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS13280 PF01180 Dihydroorotate dehydrogenase APS58_RS13285 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APS58_RS13290 PF01979 Amidohydrolase family APS58_RS13295 PF01546 Peptidase family M20/M25/M40 APS58_RS13295 PF07687 Peptidase dimerisation domain APS58_RS13315 PF01467 Cytidylyltransferase-like APS58_RS13320 PF00795 Carbon-nitrogen hydrolase APS58_RS13320 PF02540 NAD synthase APS58_RS13325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain APS58_RS13325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APS58_RS13340 PF02772 S-adenosylmethionine synthetase, central domain APS58_RS13340 PF00438 S-adenosylmethionine synthetase, N-terminal domain APS58_RS13340 PF02773 S-adenosylmethionine synthetase, C-terminal domain APS58_RS13350 PF03279 Bacterial lipid A biosynthesis acyltransferase APS58_RS13360 PF01926 50S ribosome-binding GTPase APS58_RS13365 PF00034 Cytochrome c APS58_RS13370 PF05140 ResB-like family APS58_RS13375 PF01578 Cytochrome C assembly protein APS58_RS13380 PF00174 Oxidoreductase molybdopterin binding domain APS58_RS13385 PF01794 Ferric reductase like transmembrane component APS58_RS13405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS58_RS13405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS58_RS13415 PF01491 Frataxin-like domain APS58_RS13420 PF00912 Transglycosylase APS58_RS13420 PF00905 Penicillin binding protein transpeptidase domain APS58_RS13420 PF17092 Penicillin-binding protein OB-like domain APS58_RS13425 PF11104 Type IV pilus assembly protein PilM; APS58_RS13430 PF05137 Fimbrial assembly protein (PilN) APS58_RS13445 PF11741 AMIN domain APS58_RS13445 PF03958 Bacterial type II/III secretion system short domain APS58_RS13445 PF07660 Secretin and TonB N terminus short domain APS58_RS13445 PF00263 Bacterial type II and III secretion system protein APS58_RS13455 PF01202 Shikimate kinase APS58_RS13460 PF01761 3-dehydroquinate synthase APS58_RS13465 PF13286 Phosphohydrolase-associated domain APS58_RS13465 PF01966 HD domain APS58_RS13485 PF04898 Glutamate synthase central domain APS58_RS13485 PF01493 GXGXG motif APS58_RS13485 PF01645 Conserved region in glutamate synthase APS58_RS13485 PF00310 Glutamine amidotransferases class-II APS58_RS13490 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS13490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS58_RS13495 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS58_RS13500 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS13505 PF00005 ABC transporter APS58_RS13510 PF00005 ABC transporter APS58_RS13515 PF02405 Permease MlaE APS58_RS13520 PF02470 MlaD protein APS58_RS13525 PF04333 MlaA lipoprotein APS58_RS13545 PF00005 ABC transporter APS58_RS13550 PF01061 ABC-2 type transporter APS58_RS13555 PF01722 BolA-like protein APS58_RS13560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS58_RS13565 PF01634 ATP phosphoribosyltransferase APS58_RS13570 PF00815 Histidinol dehydrogenase APS58_RS13600 PF00155 Aminotransferase class I and II APS58_RS13605 PF00475 Imidazoleglycerol-phosphate dehydratase APS58_RS13610 PF00117 Glutamine amidotransferase class-I APS58_RS13615 PF00977 Histidine biosynthesis protein APS58_RS13635 PF00534 Glycosyl transferases group 1 APS58_RS13635 PF17103 Stealth protein CR4, conserved region 4 APS58_RS13635 PF17102 Stealth protein CR3, conserved region 3 APS58_RS13635 PF11380 Stealth protein CR2, conserved region 2 APS58_RS13635 PF17101 Stealth protein CR1, conserved region 1 APS58_RS13665 PF16363 GDP-mannose 4,6 dehydratase APS58_RS13670 PF00375 Sodium:dicarboxylate symporter family APS58_RS13680 PF00977 Histidine biosynthesis protein APS58_RS13685 PF01502 Phosphoribosyl-AMP cyclohydrolase APS58_RS13690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APS58_RS13705 PF01230 HIT domain APS58_RS13710 PF02416 mttA/Hcf106 family APS58_RS13715 PF02416 mttA/Hcf106 family APS58_RS13720 PF00902 Sec-independent protein translocase protein (TatC) APS58_RS13745 PF17820 PDZ domain APS58_RS13745 PF13180 PDZ domain APS58_RS13750 PF00083 Sugar (and other) transporter APS58_RS13750 PF08946 Osmosensory transporter coiled coil APS58_RS13755 PF01784 NIF3 (NGG1p interacting factor 3) APS58_RS13765 PF13519 von Willebrand factor type A domain APS58_RS13770 PF01882 Protein of unknown function DUF58 APS58_RS13775 PF17863 AAA lid domain APS58_RS13775 PF07726 ATPase family associated with various cellular activities (AAA) APS58_RS13780 PF00595 PDZ domain APS58_RS13785 PF01026 TatD related DNase APS58_RS13800 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain APS58_RS13800 PF00437 Type II/IV secretion system protein APS58_RS13805 PF07331 Tripartite tricarboxylate transporter TctB family APS58_RS13810 PF01970 Tripartite tricarboxylate transporter TctA family APS58_RS13840 PF13192 Thioredoxin domain APS58_RS13840 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS13850 PF00106 short chain dehydrogenase APS58_RS13855 PF02743 Cache domain APS58_RS13855 PF00672 HAMP domain APS58_RS13855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS13860 PF01774 UreD urease accessory protein APS58_RS13880 PF01176 Translation initiation factor 1A / IF-1 APS58_RS13905 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS13910 PF00005 ABC transporter APS58_RS13925 PF03949 Malic enzyme, NAD binding domain APS58_RS13925 PF00390 Malic enzyme, N-terminal domain APS58_RS13925 PF01515 Phosphate acetyl/butaryl transferase APS58_RS13940 PF01177 Asp/Glu/Hydantoin racemase APS58_RS13945 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APS58_RS13950 PF07729 FCD domain APS58_RS13950 PF00392 Bacterial regulatory proteins, gntR family APS58_RS13955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS13955 PF00672 HAMP domain APS58_RS13955 PF02203 Tar ligand binding domain homologue APS58_RS13960 PF00375 Sodium:dicarboxylate symporter family APS58_RS13990 PF07687 Peptidase dimerisation domain APS58_RS13990 PF01546 Peptidase family M20/M25/M40 APS58_RS13995 PF01546 Peptidase family M20/M25/M40 APS58_RS13995 PF07687 Peptidase dimerisation domain APS58_RS14005 PF00392 Bacterial regulatory proteins, gntR family APS58_RS14005 PF07729 FCD domain APS58_RS14010 PF05161 MOFRL family APS58_RS14010 PF13660 Domain of unknown function (DUF4147) APS58_RS14020 PF00576 HIUase/Transthyretin family APS58_RS14040 PF00563 EAL domain APS58_RS14040 PF03707 Bacterial signalling protein N terminal repeat APS58_RS14040 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS14045 PF00072 Response regulator receiver domain APS58_RS14045 PF00196 Bacterial regulatory proteins, luxR family APS58_RS14050 PF07730 Histidine kinase APS58_RS14050 PF17200 Single Cache domain 2 APS58_RS14055 PF01042 Endoribonuclease L-PSP APS58_RS14065 PF13609 Gram-negative porin APS58_RS14075 PF00563 EAL domain APS58_RS14075 PF13426 PAS domain APS58_RS14075 PF08448 PAS fold APS58_RS14075 PF08447 PAS fold APS58_RS14075 PF05231 MASE1 APS58_RS14075 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS14090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS58_RS14090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APS58_RS14095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APS58_RS14095 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS14095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS58_RS14095 PF01799 [2Fe-2S] binding domain APS58_RS14110 PF00005 ABC transporter APS58_RS14115 PF02653 Branched-chain amino acid transport system / permease component APS58_RS14125 PF02608 ABC transporter substrate-binding protein PnrA-like APS58_RS14130 PF00355 Rieske [2Fe-2S] domain APS58_RS14140 PF00962 Adenosine/AMP deaminase APS58_RS14150 PF01804 Penicillin amidase APS58_RS14155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS58_RS14155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS58_RS14170 PF00692 dUTPase APS58_RS14185 PF04228 Putative neutral zinc metallopeptidase APS58_RS14190 PF00270 DEAD/DEAH box helicase APS58_RS14190 PF00271 Helicase conserved C-terminal domain APS58_RS14195 PF00149 Calcineurin-like phosphoesterase APS58_RS14200 PF00816 H-NS histone family APS58_RS14205 PF00694 Aconitase C-terminal domain APS58_RS14205 PF00330 Aconitase family (aconitate hydratase) APS58_RS14210 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS14210 PF00563 EAL domain APS58_RS14210 PF03707 Bacterial signalling protein N terminal repeat APS58_RS14230 PF01494 FAD binding domain APS58_RS14235 PF03301 Tryptophan 2,3-dioxygenase APS58_RS14240 PF00266 Aminotransferase class-V APS58_RS14245 PF04199 Putative cyclase APS58_RS14250 PF01037 Lrp/AsnC ligand binding domain APS58_RS14255 PF03692 Putative zinc- or iron-chelating domain APS58_RS14265 PF02421 Ferrous iron transport protein B APS58_RS14265 PF07670 Nucleoside recognition APS58_RS14265 PF07664 Ferrous iron transport protein B C terminus APS58_RS14280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS58_RS14280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS58_RS14285 PF00202 Aminotransferase class-III APS58_RS14295 PF06039 Malate:quinone oxidoreductase (Mqo) APS58_RS14300 PF01649 Ribosomal protein S20 APS58_RS14305 PF03023 Lipid II flippase MurJ APS58_RS14310 PF13369 Transglutaminase-like superfamily APS58_RS14315 PF14489 QueF-like protein APS58_RS14315 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term APS58_RS14325 PF03883 Peroxide stress protein YaaA APS58_RS14330 PF00575 S1 RNA binding domain APS58_RS14330 PF10150 Ribonuclease E/G family APS58_RS14330 PF12111 Polyribonucleotide phosphorylase C terminal APS58_RS14340 PF01479 S4 domain APS58_RS14340 PF00849 RNA pseudouridylate synthase APS58_RS14345 PF13419 Haloacid dehalogenase-like hydrolase APS58_RS14355 PF01343 Peptidase family S49 APS58_RS14355 PF06965 Na+/H+ antiporter 1 APS58_RS14360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS58_RS14365 PF02545 Maf-like protein APS58_RS14370 PF02620 Large ribosomal RNA subunit accumulation protein YceD APS58_RS14375 PF01783 Ribosomal L32p protein family APS58_RS14380 PF02504 Fatty acid synthesis protein APS58_RS14385 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS58_RS14385 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS58_RS14390 PF00698 Acyl transferase domain APS58_RS14400 PF00550 Phosphopantetheine attachment site APS58_RS14405 PF02801 Beta-ketoacyl synthase, C-terminal domain APS58_RS14405 PF00109 Beta-ketoacyl synthase, N-terminal domain APS58_RS14415 PF04542 Sigma-70 region 2 APS58_RS14415 PF08281 Sigma-70, region 4 APS58_RS14430 PF13180 PDZ domain APS58_RS14435 PF00009 Elongation factor Tu GTP binding domain APS58_RS14435 PF00679 Elongation factor G C-terminus APS58_RS14435 PF06421 GTP-binding protein LepA C-terminus APS58_RS14440 PF10502 Signal peptidase, peptidase S26 APS58_RS14450 PF00035 Double-stranded RNA binding motif APS58_RS14450 PF14622 Ribonuclease-III-like APS58_RS14455 PF07650 KH domain APS58_RS14455 PF01926 50S ribosome-binding GTPase APS58_RS14460 PF02565 Recombination protein O C terminal APS58_RS14460 PF11967 Recombination protein O N terminal APS58_RS14465 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APS58_RS14470 PF00933 Glycosyl hydrolase family 3 N terminal domain APS58_RS14475 PF11737 Protein of unknown function (DUF3300) APS58_RS14485 PF00360 Phytochrome region APS58_RS14485 PF01590 GAF domain APS58_RS14485 PF00563 EAL domain APS58_RS14485 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS14490 PF01336 OB-fold nucleic acid binding domain APS58_RS14490 PF00152 tRNA synthetases class II (D, K and N) APS58_RS14515 PF02397 Bacterial sugar transferase APS58_RS14530 PF02325 YGGT family APS58_RS14535 PF17848 Acetyl-coA carboxylase zinc finger domain APS58_RS14535 PF01039 Carboxyl transferase domain APS58_RS14540 PF00290 Tryptophan synthase alpha chain APS58_RS14545 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS14550 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APS58_RS14555 PF01416 tRNA pseudouridine synthase APS58_RS14565 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS58_RS14565 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS58_RS14575 PF00180 Isocitrate/isopropylmalate dehydrogenase APS58_RS14580 PF00694 Aconitase C-terminal domain APS58_RS14590 PF00330 Aconitase family (aconitate hydratase) APS58_RS14600 PF01556 DnaJ C terminal domain APS58_RS14600 PF00684 DnaJ central domain APS58_RS14600 PF00226 DnaJ domain APS58_RS14605 PF00012 Hsp70 protein APS58_RS14610 PF01025 GrpE APS58_RS14615 PF01250 Ribosomal protein S6 APS58_RS14625 PF01084 Ribosomal protein S18 APS58_RS14630 PF03948 Ribosomal protein L9, C-terminal domain APS58_RS14630 PF01281 Ribosomal protein L9, N-terminal domain APS58_RS14635 PF03796 DnaB-like helicase C terminal domain APS58_RS14635 PF00772 DnaB-like helicase N terminal domain APS58_RS14645 PF13638 PIN domain APS58_RS14645 PF02562 PhoH-like protein APS58_RS14650 PF00578 AhpC/TSA family APS58_RS14660 PF00239 Resolvase, N terminal domain APS58_RS14705 PF00155 Aminotransferase class I and II APS58_RS14710 PF03447 Homoserine dehydrogenase, NAD binding domain APS58_RS14710 PF00742 Homoserine dehydrogenase APS58_RS14710 PF01842 ACT domain APS58_RS14715 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS14715 PF14821 Threonine synthase N terminus APS58_RS14720 PF03205 Molybdopterin guanine dinucleotide synthesis protein B APS58_RS14725 PF00994 Probable molybdopterin binding domain APS58_RS14725 PF03453 MoeA N-terminal region (domain I and II) APS58_RS14725 PF03454 MoeA C-terminal region (domain IV) APS58_RS14730 PF02597 ThiS family APS58_RS14735 PF00701 Dihydrodipicolinate synthetase family APS58_RS14760 PF02391 MoaE protein APS58_RS14765 PF02861 Clp amino terminal domain, pathogenicity island component APS58_RS14765 PF10431 C-terminal, D2-small domain, of ClpB protein APS58_RS14765 PF17871 AAA lid domain APS58_RS14765 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS14765 PF07724 AAA domain (Cdc48 subfamily) APS58_RS14775 PF00171 Aldehyde dehydrogenase family APS58_RS14785 PF05175 Methyltransferase small domain APS58_RS14795 PF01207 Dihydrouridine synthase (Dus) APS58_RS14800 PF13091 PLD-like domain APS58_RS14810 PF00155 Aminotransferase class I and II APS58_RS14815 PF00312 Ribosomal protein S15 APS58_RS14820 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APS58_RS14820 PF01138 3' exoribonuclease family, domain 1 APS58_RS14820 PF03725 3' exoribonuclease family, domain 2 APS58_RS14820 PF00575 S1 RNA binding domain APS58_RS14820 PF00013 KH domain APS58_RS14825 PF00698 Acyl transferase domain APS58_RS14825 PF08240 Alcohol dehydrogenase GroES-like domain APS58_RS14825 PF00550 Phosphopantetheine attachment site APS58_RS14825 PF16197 Ketoacyl-synthetase C-terminal extension APS58_RS14825 PF00109 Beta-ketoacyl synthase, N-terminal domain APS58_RS14825 PF02801 Beta-ketoacyl synthase, C-terminal domain APS58_RS14825 PF14765 Polyketide synthase dehydratase APS58_RS14825 PF08659 KR domain APS58_RS14830 PF00121 Triosephosphate isomerase APS58_RS14835 PF03840 Preprotein translocase SecG subunit APS58_RS14845 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 APS58_RS14850 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APS58_RS14855 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APS58_RS14860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APS58_RS14870 PF10531 SLBB domain APS58_RS14870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APS58_RS14870 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APS58_RS14875 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal APS58_RS14875 PF00384 Molybdopterin oxidoreductase APS58_RS14875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APS58_RS14880 PF00146 NADH dehydrogenase APS58_RS14885 PF12838 4Fe-4S dicluster domain APS58_RS14890 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 APS58_RS14895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APS58_RS14900 PF00361 Proton-conducting membrane transporter APS58_RS14900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APS58_RS14905 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus APS58_RS14905 PF00361 Proton-conducting membrane transporter APS58_RS14910 PF00361 Proton-conducting membrane transporter APS58_RS14925 PF00005 ABC transporter APS58_RS14925 PF00664 ABC transporter transmembrane region APS58_RS14930 PF00005 ABC transporter APS58_RS14930 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS14935 PF00005 ABC transporter APS58_RS14950 PF02653 Branched-chain amino acid transport system / permease component APS58_RS14970 PF00535 Glycosyl transferase family 2 APS58_RS14970 PF13181 Tetratricopeptide repeat APS58_RS14990 PF00011 Hsp20/alpha crystallin family APS58_RS14995 PF00005 ABC transporter APS58_RS15005 PF05368 NmrA-like family APS58_RS15010 PF01638 HxlR-like helix-turn-helix APS58_RS15015 PF12146 Serine aminopeptidase, S33 APS58_RS15020 PF03009 Glycerophosphoryl diester phosphodiesterase family APS58_RS15030 PF01119 DNA mismatch repair protein, C-terminal domain APS58_RS15030 PF08676 MutL C terminal dimerisation domain APS58_RS15035 PF09335 SNARE associated Golgi protein APS58_RS15040 PF00561 alpha/beta hydrolase fold APS58_RS15055 PF11741 AMIN domain APS58_RS15055 PF01520 N-acetylmuramoyl-L-alanine amidase APS58_RS15060 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS58_RS15065 PF08331 Domain of unknown function (DUF1730) APS58_RS15075 PF03466 LysR substrate binding domain APS58_RS15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS15080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS58_RS15080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS58_RS15090 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS15095 PF02899 Phage integrase, N-terminal SAM-like domain APS58_RS15095 PF00589 Phage integrase family APS58_RS15100 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS15105 PF00563 EAL domain APS58_RS15105 PF08668 HDOD domain APS58_RS15110 PF00563 EAL domain APS58_RS15110 PF08668 HDOD domain APS58_RS15115 PF04305 Protein of unknown function (DUF455) APS58_RS15120 PF00132 Bacterial transferase hexapeptide (six repeats) APS58_RS15125 PF01430 Hsp33 protein APS58_RS15135 PF04977 Septum formation initiator APS58_RS15140 PF00113 Enolase, C-terminal TIM barrel domain APS58_RS15140 PF03952 Enolase, N-terminal domain APS58_RS15160 PF00793 DAHP synthetase I family APS58_RS15165 PF06418 CTP synthase N-terminus APS58_RS15165 PF00117 Glutamine amidotransferase class-I APS58_RS15170 PF02441 Flavoprotein APS58_RS15170 PF04127 DNA / pantothenate metabolism flavoprotein APS58_RS15175 PF00692 dUTPase APS58_RS15185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS58_RS15190 PF08007 Cupin superfamily protein APS58_RS15205 PF00753 Metallo-beta-lactamase superfamily APS58_RS15210 PF06804 NlpB/DapX lipoprotein APS58_RS15215 PF00701 Dihydrodipicolinate synthetase family APS58_RS15230 PF01751 Toprim domain APS58_RS15230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS15230 PF00986 DNA gyrase B subunit, carboxyl terminus APS58_RS15230 PF00204 DNA gyrase B APS58_RS15235 PF01464 Transglycosylase SLT domain APS58_RS15240 PF00521 DNA gyrase/topoisomerase IV, subunit A APS58_RS15245 PF02203 Tar ligand binding domain homologue APS58_RS15245 PF00672 HAMP domain APS58_RS15245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS15250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS15250 PF02203 Tar ligand binding domain homologue APS58_RS15250 PF00672 HAMP domain APS58_RS15255 PF08543 Phosphomethylpyrimidine kinase APS58_RS15290 PF00753 Metallo-beta-lactamase superfamily APS58_RS15290 PF03772 Competence protein APS58_RS15295 PF14403 Circularly permuted ATP-grasp type 2 APS58_RS15315 PF05221 S-adenosyl-L-homocysteine hydrolase APS58_RS15315 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APS58_RS15325 PF09905 DNA-binding protein VF530 APS58_RS15330 PF03466 LysR substrate binding domain APS58_RS15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS15335 PF07859 alpha/beta hydrolase fold APS58_RS15340 PF13533 Biotin-lipoyl like APS58_RS15345 PF00873 AcrB/AcrD/AcrF family APS58_RS15350 PF02321 Outer membrane efflux protein APS58_RS15355 PF00171 Aldehyde dehydrogenase family APS58_RS15365 PF00593 TonB dependent receptor APS58_RS15365 PF07715 TonB-dependent Receptor Plug Domain APS58_RS15400 PF00210 Ferritin-like domain APS58_RS15405 PF00578 AhpC/TSA family APS58_RS15405 PF10417 C-terminal domain of 1-Cys peroxiredoxin APS58_RS15410 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS15410 PF13192 Thioredoxin domain APS58_RS15415 PF04185 Phosphoesterase family APS58_RS15415 PF05506 Domain of unknown function (DUF756) APS58_RS15435 PF03618 Kinase/pyrophosphorylase APS58_RS15440 PF02896 PEP-utilising enzyme, TIM barrel domain APS58_RS15440 PF00391 PEP-utilising enzyme, mobile domain APS58_RS15440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APS58_RS15450 PF00474 Sodium:solute symporter family APS58_RS15465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS58_RS15475 PF02515 CoA-transferase family III APS58_RS15480 PF00892 EamA-like transporter family APS58_RS15485 PF06903 VirK protein APS58_RS15490 PF03466 LysR substrate binding domain APS58_RS15490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS15495 PF00701 Dihydrodipicolinate synthetase family APS58_RS15500 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS15510 PF13378 Enolase C-terminal domain-like APS58_RS15555 PF02203 Tar ligand binding domain homologue APS58_RS15555 PF00672 HAMP domain APS58_RS15555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS15560 PF04545 Sigma-70, region 4 APS58_RS15560 PF04539 Sigma-70 region 3 APS58_RS15560 PF04542 Sigma-70 region 2 APS58_RS15560 PF00140 Sigma-70 factor, region 1.2 APS58_RS15560 PF03979 Sigma-70 factor, region 1.1 APS58_RS15560 PF04546 Sigma-70, non-essential region APS58_RS15565 PF10410 DnaB-helicase binding domain of primase APS58_RS15565 PF08278 DNA primase DnaG DnaB-binding APS58_RS15565 PF13662 Toprim domain APS58_RS15565 PF08275 DNA primase catalytic core, N-terminal domain APS58_RS15565 PF01807 CHC2 zinc finger APS58_RS15570 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS15570 PF13188 PAS domain APS58_RS15570 PF00563 EAL domain APS58_RS15570 PF03707 Bacterial signalling protein N terminal repeat APS58_RS15575 PF03480 Bacterial extracellular solute-binding protein, family 7 APS58_RS15585 PF09423 PhoD-like phosphatase APS58_RS15585 PF16655 PhoD-like phosphatase, N-terminal domain APS58_RS15590 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS15595 PF02801 Beta-ketoacyl synthase, C-terminal domain APS58_RS15595 PF00107 Zinc-binding dehydrogenase APS58_RS15595 PF08240 Alcohol dehydrogenase GroES-like domain APS58_RS15595 PF00698 Acyl transferase domain APS58_RS15595 PF08659 KR domain APS58_RS15595 PF00550 Phosphopantetheine attachment site APS58_RS15595 PF14765 Polyketide synthase dehydratase APS58_RS15595 PF00109 Beta-ketoacyl synthase, N-terminal domain APS58_RS15595 PF16197 Ketoacyl-synthetase C-terminal extension APS58_RS15600 PF01975 Survival protein SurE APS58_RS15615 PF00849 RNA pseudouridylate synthase APS58_RS15615 PF01479 S4 domain APS58_RS15620 PF04079 Segregation and condensation complex subunit ScpB APS58_RS15625 PF00849 RNA pseudouridylate synthase APS58_RS15625 PF01479 S4 domain APS58_RS15630 PF00334 Nucleoside diphosphate kinase APS58_RS15635 PF04055 Radical SAM superfamily APS58_RS15650 PF04551 GcpE protein APS58_RS15655 PF13393 Histidyl-tRNA synthetase APS58_RS15655 PF03129 Anticodon binding domain APS58_RS15665 PF13360 PQQ-like domain APS58_RS15670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APS58_RS15670 PF01926 50S ribosome-binding GTPase APS58_RS15675 PF17209 Hfq protein APS58_RS15680 PF13167 GTP-binding GTPase N-terminal APS58_RS15680 PF01926 50S ribosome-binding GTPase APS58_RS15680 PF16360 GTP-binding GTPase Middle Region APS58_RS15685 PF01145 SPFH domain / Band 7 family APS58_RS15685 PF12221 Bacterial membrane protein N terminal APS58_RS15690 PF01145 SPFH domain / Band 7 family APS58_RS15695 PF13393 Histidyl-tRNA synthetase APS58_RS15700 PF00709 Adenylosuccinate synthetase APS58_RS15705 PF00156 Phosphoribosyl transferase domain APS58_RS15735 PF01479 S4 domain APS58_RS15735 PF00849 RNA pseudouridylate synthase APS58_RS15765 PF00120 Glutamine synthetase, catalytic domain APS58_RS15765 PF03951 Glutamine synthetase, beta-Grasp domain APS58_RS15775 PF00989 PAS fold APS58_RS15775 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS15775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS15780 PF00158 Sigma-54 interaction domain APS58_RS15780 PF02954 Bacterial regulatory protein, Fis family APS58_RS15780 PF00072 Response regulator receiver domain APS58_RS15790 PF03372 Endonuclease/Exonuclease/phosphatase family APS58_RS15795 PF00186 Dihydrofolate reductase APS58_RS15805 PF00303 Thymidylate synthase APS58_RS15815 PF02913 FAD linked oxidases, C-terminal domain APS58_RS15815 PF01565 FAD binding domain APS58_RS15825 PF03631 Virulence factor BrkB APS58_RS15830 PF01593 Flavin containing amine oxidoreductase APS58_RS15855 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS15855 PF05362 Lon protease (S16) C-terminal proteolytic domain APS58_RS15855 PF02190 ATP-dependent protease La (LON) substrate-binding domain APS58_RS15860 PF10431 C-terminal, D2-small domain, of ClpB protein APS58_RS15860 PF06689 ClpX C4-type zinc finger APS58_RS15860 PF07724 AAA domain (Cdc48 subfamily) APS58_RS15865 PF00574 Clp protease APS58_RS15870 PF05697 Bacterial trigger factor protein (TF) APS58_RS15870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS58_RS15870 PF05698 Bacterial trigger factor protein (TF) C-terminus APS58_RS15880 PF00873 AcrB/AcrD/AcrF family APS58_RS15885 PF13533 Biotin-lipoyl like APS58_RS15905 PF00069 Protein kinase domain APS58_RS15905 PF03793 PASTA domain APS58_RS15930 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE APS58_RS15935 PF00691 OmpA family APS58_RS15935 PF13488 Glycine zipper APS58_RS15940 PF14331 ImcF-related N-terminal domain APS58_RS15940 PF06761 Intracellular multiplication and human macrophage-killing APS58_RS15940 PF06744 Type VI secretion protein IcmF C-terminal APS58_RS15955 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 APS58_RS15960 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath APS58_RS15965 PF07024 ImpE protein APS58_RS15970 PF04965 Gene 25-like lysozyme APS58_RS15975 PF05947 Type VI secretion system, TssF APS58_RS15985 PF07724 AAA domain (Cdc48 subfamily) APS58_RS15985 PF17871 AAA lid domain APS58_RS15985 PF10431 C-terminal, D2-small domain, of ClpB protein APS58_RS15985 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS16000 PF01863 Protein of unknown function DUF45 APS58_RS16005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS58_RS16005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APS58_RS16010 PF03450 CO dehydrogenase flavoprotein C-terminal domain APS58_RS16010 PF00941 FAD binding domain in molybdopterin dehydrogenase APS58_RS16015 PF10518 TAT (twin-arginine translocation) pathway signal sequence APS58_RS16015 PF01799 [2Fe-2S] binding domain APS58_RS16015 PF00111 2Fe-2S iron-sulfur cluster binding domain APS58_RS16020 PF01177 Asp/Glu/Hydantoin racemase APS58_RS16030 PF03707 Bacterial signalling protein N terminal repeat APS58_RS16030 PF00563 EAL domain APS58_RS16030 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS16035 PF10415 Fumarase C C-terminus APS58_RS16035 PF00206 Lyase APS58_RS16045 PF00072 Response regulator receiver domain APS58_RS16045 PF00486 Transcriptional regulatory protein, C terminal APS58_RS16050 PF00672 HAMP domain APS58_RS16050 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS16055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APS58_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS16065 PF00005 ABC transporter APS58_RS16065 PF00571 CBS domain APS58_RS16070 PF03350 Uncharacterized protein family, UPF0114 APS58_RS16075 PF13193 AMP-binding enzyme C-terminal domain APS58_RS16075 PF00501 AMP-binding enzyme APS58_RS16075 PF16177 Acetyl-coenzyme A synthetase N-terminus APS58_RS16095 PF00034 Cytochrome c APS58_RS16105 PF00920 Dehydratase family APS58_RS16110 PF00210 Ferritin-like domain APS58_RS16115 PF02661 Fic/DOC family APS58_RS16120 PF01790 Prolipoprotein diacylglyceryl transferase APS58_RS16125 PF00392 Bacterial regulatory proteins, gntR family APS58_RS16125 PF07729 FCD domain APS58_RS16135 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS16145 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS16150 PF00501 AMP-binding enzyme APS58_RS16150 PF13193 AMP-binding enzyme C-terminal domain APS58_RS16155 PF13018 Extended Signal Peptide of Type V secretion system APS58_RS16155 PF02661 Fic/DOC family APS58_RS16155 PF13332 Hemagglutinin repeat APS58_RS16155 PF05860 haemagglutination activity domain APS58_RS16155 PF03543 Yersinia/Haemophilus virulence surface antigen APS58_RS16160 PF00582 Universal stress protein family APS58_RS16170 PF00403 Heavy-metal-associated domain APS58_RS16180 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS58_RS16195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS58_RS16195 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP APS58_RS16200 PF12801 4Fe-4S binding domain APS58_RS16200 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase APS58_RS16200 PF13746 4Fe-4S dicluster domain APS58_RS16215 PF13545 Crp-like helix-turn-helix domain APS58_RS16215 PF00027 Cyclic nucleotide-binding domain APS58_RS16220 PF06969 HemN C-terminal domain APS58_RS16220 PF04055 Radical SAM superfamily APS58_RS16230 PF00072 Response regulator receiver domain APS58_RS16235 PF03707 Bacterial signalling protein N terminal repeat APS58_RS16235 PF00563 EAL domain APS58_RS16235 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS16250 PF00593 TonB dependent receptor APS58_RS16250 PF07715 TonB-dependent Receptor Plug Domain APS58_RS16255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS58_RS16255 PF07685 CobB/CobQ-like glutamine amidotransferase domain APS58_RS16260 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase APS58_RS16270 PF01032 FecCD transport family APS58_RS16275 PF00005 ABC transporter APS58_RS16280 PF12557 Cob(I)alamin adenosyltransferase N terminal APS58_RS16280 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP APS58_RS16285 PF00881 Nitroreductase family APS58_RS16290 PF03186 CobD/Cbib protein APS58_RS16305 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA APS58_RS16325 PF07685 CobB/CobQ-like glutamine amidotransferase domain APS58_RS16325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS58_RS16330 PF02277 Phosphoribosyltransferase APS58_RS16355 PF00083 Sugar (and other) transporter APS58_RS16365 PF00583 Acetyltransferase (GNAT) family APS58_RS16375 PF00730 HhH-GPD superfamily base excision DNA repair protein APS58_RS16375 PF10576 Iron-sulfur binding domain of endonuclease III APS58_RS16375 PF00633 Helix-hairpin-helix motif APS58_RS16380 PF00155 Aminotransferase class I and II APS58_RS16385 PF04102 SlyX APS58_RS16400 PF00271 Helicase conserved C-terminal domain APS58_RS16400 PF00270 DEAD/DEAH box helicase APS58_RS16420 PF04405 Domain of Unknown function (DUF542) APS58_RS16420 PF01814 Hemerythrin HHE cation binding domain APS58_RS16425 PF02082 Transcriptional regulator APS58_RS16430 PF03466 LysR substrate binding domain APS58_RS16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS16435 PF01810 LysE type translocator APS58_RS16440 PF03180 NLPA lipoprotein APS58_RS16455 PF07519 Tannase and feruloyl esterase APS58_RS16465 PF02559 CarD-like/TRCF domain APS58_RS16465 PF03461 TRCF domain APS58_RS16465 PF00270 DEAD/DEAH box helicase APS58_RS16465 PF17757 UvrB interaction domain APS58_RS16465 PF00271 Helicase conserved C-terminal domain APS58_RS16470 PF02542 YgbB family APS58_RS16470 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APS58_RS16475 PF02542 YgbB family APS58_RS16475 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APS58_RS16480 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS16480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS16480 PF00672 HAMP domain APS58_RS16485 PF00072 Response regulator receiver domain APS58_RS16485 PF00486 Transcriptional regulatory protein, C terminal APS58_RS16495 PF00106 short chain dehydrogenase APS58_RS16505 PF02824 TGS domain APS58_RS16505 PF04607 Region found in RelA / SpoT proteins APS58_RS16505 PF13291 ACT domain APS58_RS16540 PF01965 DJ-1/PfpI family APS58_RS16550 PF05233 PHB accumulation regulatory domain APS58_RS16550 PF07879 PHB/PHA accumulation regulator DNA-binding domain APS58_RS16555 PF00919 Uncharacterized protein family UPF0004 APS58_RS16555 PF18693 TRAM domain APS58_RS16555 PF04055 Radical SAM superfamily APS58_RS16565 PF07690 Major Facilitator Superfamily APS58_RS16575 PF09285 Elongation factor P, C-terminal APS58_RS16575 PF08207 Elongation factor P (EF-P) KOW-like domain APS58_RS16575 PF01132 Elongation factor P (EF-P) OB domain APS58_RS16590 PF02515 CoA-transferase family III APS58_RS16595 PF00682 HMGL-like APS58_RS16600 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS16605 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS16615 PF01112 Asparaginase APS58_RS16620 PF00005 ABC transporter APS58_RS16620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS58_RS16625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS58_RS16630 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS16635 PF12911 N-terminal TM domain of oligopeptide transport permease C APS58_RS16635 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS16640 PF03576 Peptidase family S58 APS58_RS16655 PF01541 GIY-YIG catalytic domain APS58_RS16655 PF08459 UvrC Helix-hairpin-helix N-terminal APS58_RS16660 PF01066 CDP-alcohol phosphatidyltransferase APS58_RS16665 PF00216 Bacterial DNA-binding protein APS58_RS16750 PF00145 C-5 cytosine-specific DNA methylase APS58_RS16870 PF10668 Phage terminase small subunit APS58_RS16870 PF03592 Terminase small subunit APS58_RS16975 PF03869 Arc-like DNA binding domain APS58_RS16990 PF12441 CopG antitoxin of type II toxin-antitoxin system APS58_RS17080 PF01757 Acyltransferase family APS58_RS17090 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS17095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS58_RS17095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS58_RS17105 PF03442 Carbohydrate binding domain X2 APS58_RS17105 PF00942 Cellulose binding domain APS58_RS17120 PF00561 alpha/beta hydrolase fold APS58_RS17135 PF00171 Aldehyde dehydrogenase family APS58_RS17140 PF00171 Aldehyde dehydrogenase family APS58_RS17145 PF00881 Nitroreductase family APS58_RS17165 PF07044 Protein of unknown function (DUF1329) APS58_RS17170 PF00171 Aldehyde dehydrogenase family APS58_RS17175 PF12833 Helix-turn-helix domain APS58_RS17185 PF00202 Aminotransferase class-III APS58_RS17215 PF02254 TrkA-N domain APS58_RS17215 PF00999 Sodium/hydrogen exchanger family APS58_RS17225 PF00271 Helicase conserved C-terminal domain APS58_RS17225 PF00270 DEAD/DEAH box helicase APS58_RS17230 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain APS58_RS17230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APS58_RS17235 PF12848 ABC transporter APS58_RS17235 PF00005 ABC transporter APS58_RS17250 PF03576 Peptidase family S58 APS58_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS17265 PF03466 LysR substrate binding domain APS58_RS17280 PF07732 Multicopper oxidase APS58_RS17280 PF07731 Multicopper oxidase APS58_RS17280 PF00394 Multicopper oxidase APS58_RS17305 PF00403 Heavy-metal-associated domain APS58_RS17310 PF13411 MerR HTH family regulatory protein APS58_RS17335 PF01256 Carbohydrate kinase APS58_RS17335 PF03853 YjeF-related protein N-terminus APS58_RS17340 PF01266 FAD dependent oxidoreductase APS58_RS17345 PF00318 Ribosomal protein S2 APS58_RS17350 PF00889 Elongation factor TS APS58_RS17355 PF00696 Amino acid kinase family APS58_RS17360 PF01765 Ribosome recycling factor APS58_RS17365 PF01255 Putative undecaprenyl diphosphate synthase APS58_RS17375 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APS58_RS17375 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain APS58_RS17375 PF13288 DXP reductoisomerase C-terminal domain APS58_RS17380 PF02163 Peptidase family M50 APS58_RS17380 PF17820 PDZ domain APS58_RS17385 PF07244 Surface antigen variable number repeat APS58_RS17385 PF01103 Surface antigen APS58_RS17395 PF00132 Bacterial transferase hexapeptide (six repeats) APS58_RS17395 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APS58_RS17400 PF07977 FabA-like domain APS58_RS17405 PF00132 Bacterial transferase hexapeptide (six repeats) APS58_RS17405 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APS58_RS17410 PF02684 Lipid-A-disaccharide synthetase APS58_RS17415 PF01351 Ribonuclease HII APS58_RS17420 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS58_RS17420 PF00588 SpoU rRNA Methylase family APS58_RS17425 PF02515 CoA-transferase family III APS58_RS17430 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS17435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS17435 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS17435 PF18158 Adaptive response protein AidB N-terminal domain APS58_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS17440 PF03466 LysR substrate binding domain APS58_RS17450 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain APS58_RS17455 PF17432 Domain of unknown function (DUF3458_C) ARM repeats APS58_RS17455 PF11940 Domain of unknown function (DUF3458) Ig-like fold APS58_RS17455 PF01433 Peptidase family M1 domain APS58_RS17465 PF02463 RecF/RecN/SMC N terminal domain APS58_RS17480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APS58_RS17480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APS58_RS17480 PF06827 Zinc finger found in FPG and IleRS APS58_RS17485 PF00248 Aldo/keto reductase family APS58_RS17490 PF04073 Aminoacyl-tRNA editing domain APS58_RS17495 PF02660 Glycerol-3-phosphate acyltransferase APS58_RS17510 PF04461 Protein of unknown function (DUF520) APS58_RS17515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APS58_RS17515 PF01565 FAD binding domain APS58_RS17520 PF00764 Arginosuccinate synthase APS58_RS17525 PF06865 Pyrimidine/purine nucleoside phosphorylase APS58_RS17535 PF03960 ArsC family APS58_RS17540 PF02875 Mur ligase family, glutamate ligase domain APS58_RS17540 PF08245 Mur ligase middle domain APS58_RS17550 PF02674 Colicin V production protein APS58_RS17555 PF00156 Phosphoribosyl transferase domain APS58_RS17560 PF01053 Cys/Met metabolism PLP-dependent enzyme APS58_RS17565 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS58_RS17605 PF07690 Major Facilitator Superfamily APS58_RS17610 PF07690 Major Facilitator Superfamily APS58_RS17635 PF17674 HHH domain APS58_RS17635 PF16921 Tex protein YqgF-like domain APS58_RS17635 PF09371 Tex-like protein N-terminal domain APS58_RS17635 PF00575 S1 RNA binding domain APS58_RS17650 PF00465 Iron-containing alcohol dehydrogenase APS58_RS17655 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS58_RS17660 PF07859 alpha/beta hydrolase fold APS58_RS17670 PF01571 Aminomethyltransferase folate-binding domain APS58_RS17675 PF02618 YceG-like family APS58_RS17680 PF02223 Thymidylate kinase APS58_RS17695 PF01026 TatD related DNase APS58_RS17705 PF00664 ABC transporter transmembrane region APS58_RS17705 PF00005 ABC transporter APS58_RS17710 PF07676 WD40-like Beta Propeller Repeat APS58_RS17710 PF04052 TolB amino-terminal domain APS58_RS17715 PF00691 OmpA family APS58_RS17725 PF00899 ThiF family APS58_RS17740 PF13458 Periplasmic binding protein APS58_RS17745 PF02423 Ornithine cyclodeaminase/mu-crystallin family APS58_RS17785 PF03466 LysR substrate binding domain APS58_RS17785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS17800 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS17815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS58_RS17815 PF00034 Cytochrome c APS58_RS17815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS58_RS17825 PF02576 RimP N-terminal domain APS58_RS17830 PF00575 S1 RNA binding domain APS58_RS17830 PF13184 NusA-like KH domain APS58_RS17830 PF08529 NusA N-terminal domain APS58_RS17835 PF00009 Elongation factor Tu GTP binding domain APS58_RS17835 PF11987 Translation-initiation factor 2 APS58_RS17835 PF08364 Bacterial translation initiation factor IF-2 associated region APS58_RS17835 PF04760 Translation initiation factor IF-2, N-terminal region APS58_RS17840 PF02033 Ribosome-binding factor A APS58_RS17845 PF01509 TruB family pseudouridylate synthase (N terminal domain) APS58_RS17845 PF16198 tRNA pseudouridylate synthase B C-terminal domain APS58_RS17850 PF03144 Elongation factor Tu domain 2 APS58_RS17850 PF00679 Elongation factor G C-terminus APS58_RS17850 PF00009 Elongation factor Tu GTP binding domain APS58_RS17855 PF03471 Transporter associated domain APS58_RS17855 PF03741 Integral membrane protein TerC family APS58_RS17860 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS17870 PF04542 Sigma-70 region 2 APS58_RS17870 PF08281 Sigma-70, region 4 APS58_RS17880 PF01668 SmpB protein APS58_RS17885 PF03364 Polyketide cyclase / dehydrase and lipid transport APS58_RS17890 PF03658 RnfH family Ubiquitin APS58_RS17900 PF00571 CBS domain APS58_RS17900 PF00478 IMP dehydrogenase / GMP reductase domain APS58_RS17915 PF00958 GMP synthase C terminal domain APS58_RS17915 PF00117 Glutamine amidotransferase class-I APS58_RS17915 PF02540 NAD synthase APS58_RS17920 PF13356 Arm DNA-binding domain APS58_RS17920 PF00589 Phage integrase family APS58_RS17960 PF12161 HsdM N-terminal domain APS58_RS17960 PF02384 N-6 DNA Methylase APS58_RS17965 PF01420 Type I restriction modification DNA specificity domain APS58_RS17970 PF02463 RecF/RecN/SMC N terminal domain APS58_RS17990 PF03466 LysR substrate binding domain APS58_RS17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS18015 PF04717 Type VI secretion system, phage-baseplate injector APS58_RS18015 PF06715 Gp5 C-terminal repeat (3 copies) APS58_RS18065 PF13649 Methyltransferase domain APS58_RS18070 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS18085 PF00313 'Cold-shock' DNA-binding domain APS58_RS18090 PF00293 NUDIX domain APS58_RS18110 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS18115 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS18115 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS18125 PF07715 TonB-dependent Receptor Plug Domain APS58_RS18125 PF00593 TonB dependent receptor APS58_RS18130 PF00005 ABC transporter APS58_RS18140 PF01032 FecCD transport family APS58_RS18150 PF14850 DNA-binding domain of Proline dehydrogenase APS58_RS18150 PF00171 Aldehyde dehydrogenase family APS58_RS18150 PF01619 Proline dehydrogenase APS58_RS18150 PF18327 Proline utilization A proline dehydrogenase N-terminal domain APS58_RS18155 PF01037 Lrp/AsnC ligand binding domain APS58_RS18165 PF05958 tRNA (Uracil-5-)-methyltransferase APS58_RS18175 PF01027 Inhibitor of apoptosis-promoting Bax1 APS58_RS18180 PF03928 Haem-degrading APS58_RS18190 PF02472 Biopolymer transport protein ExbD/TolR APS58_RS18195 PF01618 MotA/TolQ/ExbB proton channel family APS58_RS18210 PF09361 Phasin protein APS58_RS18225 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain APS58_RS18225 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APS58_RS18230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS58_RS18230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS58_RS18235 PF02646 RmuC family APS58_RS18255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APS58_RS18260 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS58_RS18280 PF05378 Hydantoinase/oxoprolinase N-terminal region APS58_RS18280 PF01968 Hydantoinase/oxoprolinase APS58_RS18290 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) APS58_RS18300 PF00361 Proton-conducting membrane transporter APS58_RS18305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APS58_RS18310 PF00361 Proton-conducting membrane transporter APS58_RS18310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APS58_RS18310 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter APS58_RS18310 PF13244 Domain of unknown function (DUF4040) APS58_RS18315 PF18073 Rubredoxin metal binding domain APS58_RS18325 PF00216 Bacterial DNA-binding protein APS58_RS18330 PF00575 S1 RNA binding domain APS58_RS18335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS58_RS18340 PF02153 Prephenate dehydrogenase APS58_RS18345 PF01817 Chorismate mutase type II APS58_RS18345 PF01842 ACT domain APS58_RS18345 PF00800 Prephenate dehydratase APS58_RS18350 PF00266 Aminotransferase class-V APS58_RS18355 PF03989 DNA gyrase C-terminal domain, beta-propeller APS58_RS18355 PF00521 DNA gyrase/topoisomerase IV, subunit A APS58_RS18360 PF00691 OmpA family APS58_RS18370 PF13419 Haloacid dehalogenase-like hydrolase APS58_RS18390 PF00072 Response regulator receiver domain APS58_RS18390 PF00486 Transcriptional regulatory protein, C terminal APS58_RS18400 PF01970 Tripartite tricarboxylate transporter TctA family APS58_RS18405 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS18465 PF01145 SPFH domain / Band 7 family APS58_RS18475 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APS58_RS18475 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APS58_RS18475 PF01276 Orn/Lys/Arg decarboxylase, major domain APS58_RS18480 PF02469 Fasciclin domain APS58_RS18490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS58_RS18495 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS18500 PF12911 N-terminal TM domain of oligopeptide transport permease C APS58_RS18500 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS18505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS58_RS18505 PF00005 ABC transporter APS58_RS18510 PF08448 PAS fold APS58_RS18510 PF08447 PAS fold APS58_RS18510 PF05231 MASE1 APS58_RS18510 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS18510 PF00563 EAL domain APS58_RS18510 PF13426 PAS domain APS58_RS18515 PF01594 AI-2E family transporter APS58_RS18520 PF16078 2-oxoglutarate dehydrogenase N-terminus APS58_RS18520 PF00676 Dehydrogenase E1 component APS58_RS18520 PF16870 2-oxoglutarate dehydrogenase C-terminal APS58_RS18520 PF02779 Transketolase, pyrimidine binding domain APS58_RS18525 PF02817 e3 binding domain APS58_RS18525 PF00364 Biotin-requiring enzyme APS58_RS18525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS58_RS18530 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS18530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS58_RS18535 PF03969 AFG1-like ATPase APS58_RS18550 PF13307 Helicase C-terminal domain APS58_RS18550 PF04851 Type III restriction enzyme, res subunit APS58_RS18555 PF13525 Outer membrane lipoprotein APS58_RS18560 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS58_RS18560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS58_RS18560 PF14579 Helix-hairpin-helix motif APS58_RS18560 PF01336 OB-fold nucleic acid binding domain APS58_RS18560 PF02811 PHP domain APS58_RS18565 PF02617 ATP-dependent Clp protease adaptor protein ClpS APS58_RS18570 PF10431 C-terminal, D2-small domain, of ClpB protein APS58_RS18570 PF17871 AAA lid domain APS58_RS18570 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS18570 PF02861 Clp amino terminal domain, pathogenicity island component APS58_RS18570 PF07724 AAA domain (Cdc48 subfamily) APS58_RS18575 PF13406 Transglycosylase SLT domain APS58_RS18580 PF00929 Exonuclease APS58_RS18580 PF08411 Exonuclease C-terminal APS58_RS18585 PF02146 Sir2 family APS58_RS18590 PF02954 Bacterial regulatory protein, Fis family APS58_RS18590 PF01590 GAF domain APS58_RS18590 PF00158 Sigma-54 interaction domain APS58_RS18605 PF00107 Zinc-binding dehydrogenase APS58_RS18605 PF08240 Alcohol dehydrogenase GroES-like domain APS58_RS18610 PF00171 Aldehyde dehydrogenase family APS58_RS18615 PF00226 DnaJ domain APS58_RS18615 PF01556 DnaJ C terminal domain APS58_RS18615 PF00684 DnaJ central domain APS58_RS18650 PF07969 Amidohydrolase family APS58_RS18660 PF13302 Acetyltransferase (GNAT) domain APS58_RS18675 PF00291 Pyridoxal-phosphate dependent enzyme APS58_RS18680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS58_RS18680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS58_RS18680 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS18685 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS18685 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS18690 PF01568 Molydopterin dinucleotide binding domain APS58_RS18690 PF00384 Molybdopterin oxidoreductase APS58_RS18695 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS18700 PF00581 Rhodanese-like domain APS58_RS18705 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS18710 PF00206 Lyase APS58_RS18710 PF10397 Adenylosuccinate lyase C-terminus APS58_RS18715 PF02913 FAD linked oxidases, C-terminal domain APS58_RS18715 PF01565 FAD binding domain APS58_RS18730 PF00753 Metallo-beta-lactamase superfamily APS58_RS18735 PF05872 Bacterial protein of unknown function (DUF853) APS58_RS18740 PF01709 Transcriptional regulator APS58_RS18745 PF02844 Phosphoribosylglycinamide synthetase, N domain APS58_RS18745 PF02843 Phosphoribosylglycinamide synthetase, C domain APS58_RS18745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APS58_RS18750 PF01218 Coproporphyrinogen III oxidase APS58_RS18760 PF02590 Predicted SPOUT methyltransferase APS58_RS18770 PF02545 Maf-like protein APS58_RS18775 PF00575 S1 RNA binding domain APS58_RS18775 PF10150 Ribonuclease E/G family APS58_RS18815 PF11398 Protein of unknown function (DUF2813) APS58_RS18830 PF12697 Alpha/beta hydrolase family APS58_RS18840 PF01494 FAD binding domain APS58_RS18845 PF00106 short chain dehydrogenase APS58_RS18855 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS18860 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS18860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS18860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS18865 PF13193 AMP-binding enzyme C-terminal domain APS58_RS18865 PF00501 AMP-binding enzyme APS58_RS18870 PF13458 Periplasmic binding protein APS58_RS18875 PF02653 Branched-chain amino acid transport system / permease component APS58_RS18885 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS18885 PF00005 ABC transporter APS58_RS18890 PF00005 ABC transporter APS58_RS18905 PF00155 Aminotransferase class I and II APS58_RS18910 PF03466 LysR substrate binding domain APS58_RS18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS18930 PF02789 Cytosol aminopeptidase family, N-terminal domain APS58_RS18930 PF00883 Cytosol aminopeptidase family, catalytic domain APS58_RS18950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS58_RS18950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS58_RS18960 PF07238 PilZ domain APS58_RS18970 PF00582 Universal stress protein family APS58_RS18985 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS18990 PF00106 short chain dehydrogenase APS58_RS18995 PF00849 RNA pseudouridylate synthase APS58_RS19000 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS19000 PF08448 PAS fold APS58_RS19000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19000 PF13188 PAS domain APS58_RS19000 PF00072 Response regulator receiver domain APS58_RS19005 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APS58_RS19005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS58_RS19010 PF02347 Glycine cleavage system P-protein APS58_RS19015 PF01597 Glycine cleavage H-protein APS58_RS19020 PF01571 Aminomethyltransferase folate-binding domain APS58_RS19020 PF08669 Glycine cleavage T-protein C-terminal barrel domain APS58_RS19025 PF01037 Lrp/AsnC ligand binding domain APS58_RS19030 PF00005 ABC transporter APS58_RS19035 PF02653 Branched-chain amino acid transport system / permease component APS58_RS19045 PF08212 Lipocalin-like domain APS58_RS19060 PF06628 Catalase-related immune-responsive APS58_RS19060 PF00199 Catalase APS58_RS19090 PF00141 Peroxidase APS58_RS19100 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS19115 PF01144 Coenzyme A transferase APS58_RS19120 PF01144 Coenzyme A transferase APS58_RS19125 PF01584 CheW-like domain APS58_RS19130 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS19140 PF03466 LysR substrate binding domain APS58_RS19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS19150 PF00795 Carbon-nitrogen hydrolase APS58_RS19150 PF02540 NAD synthase APS58_RS19155 PF00543 Nitrogen regulatory protein P-II APS58_RS19160 PF03641 Possible lysine decarboxylase APS58_RS19165 PF01219 Prokaryotic diacylglycerol kinase APS58_RS19185 PF04542 Sigma-70 region 2 APS58_RS19185 PF08281 Sigma-70, region 4 APS58_RS19190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS58_RS19190 PF00205 Thiamine pyrophosphate enzyme, central domain APS58_RS19190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS58_RS19195 PF10369 Small subunit of acetolactate synthase APS58_RS19200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APS58_RS19200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APS58_RS19205 PF01066 CDP-alcohol phosphatidyltransferase APS58_RS19210 PF08502 LeuA allosteric (dimerisation) domain APS58_RS19210 PF00682 HMGL-like APS58_RS19215 PF00768 D-alanyl-D-alanine carboxypeptidase APS58_RS19220 PF09339 IclR helix-turn-helix domain APS58_RS19220 PF01614 Bacterial transcriptional regulator APS58_RS19225 PF04376 Arginine-tRNA-protein transferase, N terminus APS58_RS19225 PF04377 Arginine-tRNA-protein transferase, C terminus APS58_RS19230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APS58_RS19245 PF04304 Protein of unknown function (DUF454) APS58_RS19250 PF01327 Polypeptide deformylase APS58_RS19255 PF08335 GlnD PII-uridylyltransferase APS58_RS19255 PF01966 HD domain APS58_RS19255 PF01909 Nucleotidyltransferase domain APS58_RS19260 PF00557 Metallopeptidase family M24 APS58_RS19265 PF02769 AIR synthase related protein, C-terminal domain APS58_RS19265 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APS58_RS19265 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal APS58_RS19280 PF03707 Bacterial signalling protein N terminal repeat APS58_RS19280 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS19280 PF00563 EAL domain APS58_RS19285 PF05661 Protein of unknown function (DUF808) APS58_RS19290 PF03922 OmpW family APS58_RS19295 PF00672 HAMP domain APS58_RS19295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS58_RS19295 PF00072 Response regulator receiver domain APS58_RS19295 PF01627 Hpt domain APS58_RS19295 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS19295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19305 PF10017 Histidine-specific methyltransferase, SAM-dependent APS58_RS19310 PF12867 DinB superfamily APS58_RS19310 PF03781 Sulfatase-modifying factor enzyme 1 APS58_RS19315 PF01053 Cys/Met metabolism PLP-dependent enzyme APS58_RS19320 PF07676 WD40-like Beta Propeller Repeat APS58_RS19320 PF00326 Prolyl oligopeptidase family APS58_RS19330 PF12392 Collagenase APS58_RS19330 PF01136 Peptidase family U32 APS58_RS19340 PF13458 Periplasmic binding protein APS58_RS19350 PF14437 MafB19-like deaminase APS58_RS19355 PF17676 LD-carboxypeptidase C-terminal domain APS58_RS19355 PF02016 LD-carboxypeptidase N-terminal domain APS58_RS19360 PF16701 Adenylate cyclase regulatory domain APS58_RS19360 PF00211 Adenylate and Guanylate cyclase catalytic domain APS58_RS19365 PF01804 Penicillin amidase APS58_RS19370 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS19370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS19370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS19380 PF00027 Cyclic nucleotide-binding domain APS58_RS19380 PF13545 Crp-like helix-turn-helix domain APS58_RS19385 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS19390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS58_RS19390 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain APS58_RS19390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS58_RS19400 PF02581 Thiamine monophosphate synthase APS58_RS19405 PF05690 Thiazole biosynthesis protein ThiG APS58_RS19415 PF01266 FAD dependent oxidoreductase APS58_RS19420 PF08543 Phosphomethylpyrimidine kinase APS58_RS19425 PF00069 Protein kinase domain APS58_RS19465 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS58_RS19470 PF00037 4Fe-4S binding domain APS58_RS19470 PF11953 Domain of unknown function (DUF3470) APS58_RS19475 PF00009 Elongation factor Tu GTP binding domain APS58_RS19480 PF01507 Phosphoadenosine phosphosulfate reductase family APS58_RS19490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS58_RS19490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS58_RS19495 PF01925 Sulfite exporter TauE/SafE APS58_RS19515 PF01266 FAD dependent oxidoreductase APS58_RS19515 PF05430 S-adenosyl-L-methionine-dependent methyltransferase APS58_RS19520 PF04362 Bacterial Fe(2+) trafficking APS58_RS19530 PF09084 NMT1/THI5 like APS58_RS19540 PF00296 Luciferase-like monooxygenase APS58_RS19550 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS19555 PF00005 ABC transporter APS58_RS19560 PF03459 TOBE domain APS58_RS19565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS19565 PF03466 LysR substrate binding domain APS58_RS19575 PF00034 Cytochrome c APS58_RS19590 PF02272 DHHA1 domain APS58_RS19590 PF01411 tRNA synthetases class II (A) APS58_RS19590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS58_RS19595 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS19600 PF02390 Putative methyltransferase APS58_RS19605 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS58_RS19615 PF03466 LysR substrate binding domain APS58_RS19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS19620 PF17954 Quercetinase C-terminal cupin domain APS58_RS19620 PF02678 Pirin APS58_RS19625 PF03358 NADPH-dependent FMN reductase APS58_RS19630 PF02678 Pirin APS58_RS19630 PF05726 Pirin C-terminal cupin domain APS58_RS19635 PF17773 UPF0176 acylphosphatase like domain APS58_RS19640 PF10609 NUBPL iron-transfer P-loop NTPase APS58_RS19645 PF00072 Response regulator receiver domain APS58_RS19645 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS19650 PF01740 STAS domain APS58_RS19650 PF00916 Sulfate permease family APS58_RS19660 PF01053 Cys/Met metabolism PLP-dependent enzyme APS58_RS19670 PF13472 GDSL-like Lipase/Acylhydrolase family APS58_RS19675 PF00005 ABC transporter APS58_RS19680 PF00588 SpoU rRNA Methylase family APS58_RS19680 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS58_RS19685 PF02146 Sir2 family APS58_RS19690 PF00248 Aldo/keto reductase family APS58_RS19700 PF02417 Chromate transporter APS58_RS19705 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19705 PF08521 Two-component sensor kinase N-terminal APS58_RS19710 PF00486 Transcriptional regulatory protein, C terminal APS58_RS19710 PF00072 Response regulator receiver domain APS58_RS19715 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS19725 PF01970 Tripartite tricarboxylate transporter TctA family APS58_RS19735 PF00593 TonB dependent receptor APS58_RS19735 PF07715 TonB-dependent Receptor Plug Domain APS58_RS19745 PF10605 3HB-oligomer hydrolase (3HBOH) APS58_RS19760 PF00486 Transcriptional regulatory protein, C terminal APS58_RS19760 PF00072 Response regulator receiver domain APS58_RS19765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19765 PF16736 Single Cache-like APS58_RS19765 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS19765 PF00989 PAS fold APS58_RS19770 PF00762 Ferrochelatase APS58_RS19775 PF13419 Haloacid dehalogenase-like hydrolase APS58_RS19785 PF01053 Cys/Met metabolism PLP-dependent enzyme APS58_RS19790 PF00571 CBS domain APS58_RS19790 PF00005 ABC transporter APS58_RS19795 PF01264 Chorismate synthase APS58_RS19805 PF03477 ATP cone domain APS58_RS19810 PF00464 Serine hydroxymethyltransferase APS58_RS19815 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain APS58_RS19815 PF01464 Transglycosylase SLT domain APS58_RS19840 PF08206 Ribonuclease B OB domain APS58_RS19840 PF00773 RNB domain APS58_RS19840 PF17876 Cold shock domain APS58_RS19840 PF08461 Ribonuclease R winged-helix domain APS58_RS19840 PF00575 S1 RNA binding domain APS58_RS19855 PF00534 Glycosyl transferases group 1 APS58_RS19855 PF08323 Starch synthase catalytic domain APS58_RS19860 PF00128 Alpha amylase, catalytic domain APS58_RS19865 PF00128 Alpha amylase, catalytic domain APS58_RS19865 PF11941 Domain of unknown function (DUF3459) APS58_RS19870 PF00128 Alpha amylase, catalytic domain APS58_RS19870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS58_RS19875 PF00483 Nucleotidyl transferase APS58_RS19885 PF00360 Phytochrome region APS58_RS19885 PF08446 PAS fold APS58_RS19885 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19885 PF01590 GAF domain APS58_RS19895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19895 PF13426 PAS domain APS58_RS19895 PF00072 Response regulator receiver domain APS58_RS19900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19900 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS19905 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS19915 PF13581 Histidine kinase-like ATPase domain APS58_RS19920 PF01740 STAS domain APS58_RS19925 PF08678 Rsbr N terminal APS58_RS19925 PF01740 STAS domain APS58_RS19935 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS19940 PF00005 ABC transporter APS58_RS19945 PF07702 UTRA domain APS58_RS19945 PF00392 Bacterial regulatory proteins, gntR family APS58_RS19950 PF00221 Aromatic amino acid lyase APS58_RS19955 PF17391 Urocanase N-terminal domain APS58_RS19955 PF17392 Urocanase C-terminal domain APS58_RS19955 PF01175 Urocanase Rossmann-like domain APS58_RS19970 PF01979 Amidohydrolase family APS58_RS19985 PF00892 EamA-like transporter family APS58_RS19990 PF12951 Passenger-associated-transport-repeat APS58_RS20000 PF02666 Phosphatidylserine decarboxylase APS58_RS20005 PF01176 Translation initiation factor 1A / IF-1 APS58_RS20035 PF04279 Intracellular septation protein A APS58_RS20040 PF01641 SelR domain APS58_RS20045 PF02696 Uncharacterized ACR, YdiU/UPF0061 family APS58_RS20050 PF00501 AMP-binding enzyme APS58_RS20050 PF13193 AMP-binding enzyme C-terminal domain APS58_RS20060 PF02653 Branched-chain amino acid transport system / permease component APS58_RS20070 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS58_RS20070 PF00005 ABC transporter APS58_RS20075 PF00005 ABC transporter APS58_RS20095 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS20100 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS20100 PF00563 EAL domain APS58_RS20100 PF03707 Bacterial signalling protein N terminal repeat APS58_RS20110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS58_RS20110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS58_RS20110 PF00378 Enoyl-CoA hydratase/isomerase APS58_RS20115 PF02803 Thiolase, C-terminal domain APS58_RS20115 PF00108 Thiolase, N-terminal domain APS58_RS20120 PF03061 Thioesterase superfamily APS58_RS20125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS20125 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS20125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS20125 PF12806 Acetyl-CoA dehydrogenase C-terminal like APS58_RS20145 PF16884 N-terminal domain of oxidoreductase APS58_RS20145 PF00107 Zinc-binding dehydrogenase APS58_RS20150 PF13673 Acetyltransferase (GNAT) domain APS58_RS20160 PF00106 short chain dehydrogenase APS58_RS20165 PF00106 short chain dehydrogenase APS58_RS20170 PF13416 Bacterial extracellular solute-binding protein APS58_RS20180 PF00892 EamA-like transporter family APS58_RS20185 PF01037 Lrp/AsnC ligand binding domain APS58_RS20200 PF00463 Isocitrate lyase family APS58_RS20205 PF03129 Anticodon binding domain APS58_RS20205 PF02824 TGS domain APS58_RS20205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS58_RS20205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS58_RS20210 PF00707 Translation initiation factor IF-3, C-terminal domain APS58_RS20210 PF05198 Translation initiation factor IF-3, N-terminal domain APS58_RS20215 PF01632 Ribosomal protein L35 APS58_RS20220 PF00453 Ribosomal protein L20 APS58_RS20225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APS58_RS20225 PF01409 tRNA synthetases class II core domain (F) APS58_RS20230 PF01588 Putative tRNA binding domain APS58_RS20230 PF03147 Ferredoxin-fold anticodon binding domain APS58_RS20230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APS58_RS20230 PF03483 B3/4 domain APS58_RS20230 PF03484 tRNA synthetase B5 domain APS58_RS20235 PF00216 Bacterial DNA-binding protein APS58_RS20240 PF13411 MerR HTH family regulatory protein APS58_RS20260 PF12464 Maltose acetyltransferase APS58_RS20260 PF14602 Hexapeptide repeat of succinyl-transferase APS58_RS20265 PF00005 ABC transporter APS58_RS20265 PF00664 ABC transporter transmembrane region APS58_RS20270 PF02040 Arsenical pump membrane protein APS58_RS20275 PF03707 Bacterial signalling protein N terminal repeat APS58_RS20275 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS20275 PF00563 EAL domain APS58_RS20280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family APS58_RS20290 PF02463 RecF/RecN/SMC N terminal domain APS58_RS20290 PF06470 SMC proteins Flexible Hinge Domain APS58_RS20300 PF12826 Helix-hairpin-helix motif APS58_RS20300 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APS58_RS20300 PF00533 BRCA1 C Terminus (BRCT) domain APS58_RS20300 PF03120 NAD-dependent DNA ligase OB-fold domain APS58_RS20300 PF01653 NAD-dependent DNA ligase adenylation domain APS58_RS20315 PF12795 Mechanosensitive ion channel porin domain APS58_RS20315 PF12794 Mechanosensitive ion channel inner membrane domain 1 APS58_RS20315 PF00924 Mechanosensitive ion channel APS58_RS20320 PF01012 Electron transfer flavoprotein domain APS58_RS20325 PF01012 Electron transfer flavoprotein domain APS58_RS20325 PF00766 Electron transfer flavoprotein FAD-binding domain APS58_RS20330 PF12806 Acetyl-CoA dehydrogenase C-terminal like APS58_RS20330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS20330 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS20330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS20360 PF04055 Radical SAM superfamily APS58_RS20375 PF01546 Peptidase family M20/M25/M40 APS58_RS20375 PF07687 Peptidase dimerisation domain APS58_RS20380 PF01037 Lrp/AsnC ligand binding domain APS58_RS20385 PF00202 Aminotransferase class-III APS58_RS20390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS58_RS20410 PF01266 FAD dependent oxidoreductase APS58_RS20420 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS20425 PF12911 N-terminal TM domain of oligopeptide transport permease C APS58_RS20425 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS20430 PF00005 ABC transporter APS58_RS20430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS58_RS20435 PF00180 Isocitrate/isopropylmalate dehydrogenase APS58_RS20440 PF00171 Aldehyde dehydrogenase family APS58_RS20445 PF08019 Phosphoethanolamine transferase EptA/EptB APS58_RS20445 PF00884 Sulfatase APS58_RS20450 PF00756 Putative esterase APS58_RS20455 PF08240 Alcohol dehydrogenase GroES-like domain APS58_RS20455 PF00107 Zinc-binding dehydrogenase APS58_RS20460 PF01965 DJ-1/PfpI family APS58_RS20460 PF12833 Helix-turn-helix domain APS58_RS20465 PF13302 Acetyltransferase (GNAT) domain APS58_RS20475 PF00285 Citrate synthase, C-terminal domain APS58_RS20480 PF03937 Flavinator of succinate dehydrogenase APS58_RS20485 PF13085 2Fe-2S iron-sulfur cluster binding domain APS58_RS20490 PF00890 FAD binding domain APS58_RS20490 PF02910 Fumarate reductase flavoprotein C-term APS58_RS20505 PF07702 UTRA domain APS58_RS20505 PF00392 Bacterial regulatory proteins, gntR family APS58_RS20510 PF00056 lactate/malate dehydrogenase, NAD binding domain APS58_RS20510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APS58_RS20515 PF13649 Methyltransferase domain APS58_RS20530 PF00330 Aconitase family (aconitate hydratase) APS58_RS20530 PF06434 Aconitate hydratase 2 N-terminus APS58_RS20530 PF11791 Aconitate B N-terminal domain APS58_RS20535 PF05992 SbmA/BacA-like family APS58_RS20550 PF16325 Peptidase family U32 C-terminal domain APS58_RS20550 PF01136 Peptidase family U32 APS58_RS20555 PF03466 LysR substrate binding domain APS58_RS20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS20565 PF00072 Response regulator receiver domain APS58_RS20570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS20570 PF00989 PAS fold APS58_RS20580 PF03626 Prokaryotic Cytochrome C oxidase subunit IV APS58_RS20585 PF00510 Cytochrome c oxidase subunit III APS58_RS20590 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS58_RS20595 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS58_RS20595 PF06481 COX Aromatic Rich Motif APS58_RS20600 PF00083 Sugar (and other) transporter APS58_RS20600 PF07690 Major Facilitator Superfamily APS58_RS20610 PF02472 Biopolymer transport protein ExbD/TolR APS58_RS20615 PF01618 MotA/TolQ/ExbB proton channel family APS58_RS20620 PF03061 Thioesterase superfamily APS58_RS20625 PF00155 Aminotransferase class I and II APS58_RS20630 PF01029 NusB family APS58_RS20635 PF00885 6,7-dimethyl-8-ribityllumazine synthase APS58_RS20640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APS58_RS20640 PF00925 GTP cyclohydrolase II APS58_RS20660 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS20660 PF00989 PAS fold APS58_RS20670 PF00072 Response regulator receiver domain APS58_RS20670 PF00486 Transcriptional regulatory protein, C terminal APS58_RS20675 PF01339 CheB methylesterase APS58_RS20675 PF00072 Response regulator receiver domain APS58_RS20685 PF00672 HAMP domain APS58_RS20685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS20685 PF02203 Tar ligand binding domain homologue APS58_RS20700 PF13378 Enolase C-terminal domain-like APS58_RS20700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS58_RS20705 PF01081 KDPG and KHG aldolase APS58_RS20710 PF05035 2-keto-3-deoxy-galactonokinase APS58_RS20715 PF00701 Dihydrodipicolinate synthetase family APS58_RS20725 PF00920 Dehydratase family APS58_RS20730 PF02653 Branched-chain amino acid transport system / permease component APS58_RS20735 PF02653 Branched-chain amino acid transport system / permease component APS58_RS20740 PF00005 ABC transporter APS58_RS20745 PF02653 Branched-chain amino acid transport system / permease component APS58_RS20750 PF00005 ABC transporter APS58_RS20755 PF13407 Periplasmic binding protein domain APS58_RS20760 PF13407 Periplasmic binding protein domain APS58_RS20765 PF00171 Aldehyde dehydrogenase family APS58_RS20770 PF03466 LysR substrate binding domain APS58_RS20770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS20780 PF08450 SMP-30/Gluconolactonase/LRE-like region APS58_RS20790 PF04262 Glutamate-cysteine ligase APS58_RS20795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS58_RS20795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS58_RS20795 PF00205 Thiamine pyrophosphate enzyme, central domain APS58_RS20800 PF02463 RecF/RecN/SMC N terminal domain APS58_RS20810 PF01810 LysE type translocator APS58_RS20815 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS20815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS20830 PF01926 50S ribosome-binding GTPase APS58_RS20835 PF13609 Gram-negative porin APS58_RS20850 PF07690 Major Facilitator Superfamily APS58_RS20860 PF09278 MerR, DNA binding APS58_RS20860 PF00376 MerR family regulatory protein APS58_RS20865 PF02308 MgtC family APS58_RS20870 PF00849 RNA pseudouridylate synthase APS58_RS20895 PF01547 Bacterial extracellular solute-binding protein APS58_RS20900 PF02203 Tar ligand binding domain homologue APS58_RS20900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS20900 PF00672 HAMP domain APS58_RS20920 PF00849 RNA pseudouridylate synthase APS58_RS20930 PF13091 PLD-like domain APS58_RS20930 PF13396 Phospholipase_D-nuclease N-terminal APS58_RS20970 PF00440 Bacterial regulatory proteins, tetR family APS58_RS20970 PF17932 Tetracyclin repressor-like, C-terminal domain APS58_RS20985 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS58_RS20985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain APS58_RS20995 PF01220 Dehydroquinase class II APS58_RS21005 PF00472 RF-1 domain APS58_RS21010 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APS58_RS21030 PF01037 Lrp/AsnC ligand binding domain APS58_RS21040 PF03466 LysR substrate binding domain APS58_RS21040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS21045 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS21055 PF06167 Glucose-regulated metallo-peptidase M90 APS58_RS21060 PF00149 Calcineurin-like phosphoesterase APS58_RS21065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS58_RS21070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS58_RS21085 PF09190 DALR domain APS58_RS21085 PF01406 tRNA synthetases class I (C) catalytic domain APS58_RS21090 PF12833 Helix-turn-helix domain APS58_RS21090 PF00730 HhH-GPD superfamily base excision DNA repair protein APS58_RS21090 PF06029 AlkA N-terminal domain APS58_RS21090 PF02805 Metal binding domain of Ada APS58_RS21095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APS58_RS21100 PF09179 TilS substrate binding domain APS58_RS21100 PF01171 PP-loop family APS58_RS21105 PF13840 ACT domain APS58_RS21105 PF01842 ACT domain APS58_RS21105 PF00696 Amino acid kinase family APS58_RS21165 PF05593 RHS Repeat APS58_RS21165 PF03527 RHS protein APS58_RS21195 PF00176 SNF2 family N-terminal domain APS58_RS21195 PF00271 Helicase conserved C-terminal domain APS58_RS21195 PF04434 SWIM zinc finger APS58_RS21210 PF00877 NlpC/P60 family APS58_RS21215 PF07995 Glucose / Sorbosone dehydrogenase APS58_RS21225 PF16177 Acetyl-coenzyme A synthetase N-terminus APS58_RS21225 PF00501 AMP-binding enzyme APS58_RS21225 PF13193 AMP-binding enzyme C-terminal domain APS58_RS21230 PF00563 EAL domain APS58_RS21230 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS21230 PF03707 Bacterial signalling protein N terminal repeat APS58_RS21240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS58_RS21240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APS58_RS21245 PF12833 Helix-turn-helix domain APS58_RS21245 PF00730 HhH-GPD superfamily base excision DNA repair protein APS58_RS21245 PF06029 AlkA N-terminal domain APS58_RS21245 PF02805 Metal binding domain of Ada APS58_RS21250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS58_RS21250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS58_RS21250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS58_RS21250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS58_RS21260 PF00534 Glycosyl transferases group 1 APS58_RS21260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APS58_RS21265 PF00583 Acetyltransferase (GNAT) family APS58_RS21265 PF13380 CoA binding domain APS58_RS21265 PF13607 Succinyl-CoA ligase like flavodoxin domain APS58_RS21270 PF02321 Outer membrane efflux protein APS58_RS21285 PF00440 Bacterial regulatory proteins, tetR family APS58_RS21285 PF17922 Tetracyclin repressor-like, C-terminal domain APS58_RS21290 PF01625 Peptide methionine sulfoxide reductase APS58_RS21300 PF00005 ABC transporter APS58_RS21325 PF07715 TonB-dependent Receptor Plug Domain APS58_RS21325 PF00593 TonB dependent receptor APS58_RS21330 PF01266 FAD dependent oxidoreductase APS58_RS21335 PF00171 Aldehyde dehydrogenase family APS58_RS21345 PF01243 Pyridoxamine 5'-phosphate oxidase APS58_RS21345 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APS58_RS21370 PF00356 Bacterial regulatory proteins, lacI family APS58_RS21380 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component APS58_RS21385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS58_RS21390 PF03480 Bacterial extracellular solute-binding protein, family 7 APS58_RS21395 PF00920 Dehydratase family APS58_RS21400 PF01081 KDPG and KHG aldolase APS58_RS21410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS58_RS21450 PF00005 ABC transporter APS58_RS21455 PF03466 LysR substrate binding domain APS58_RS21455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS21460 PF03358 NADPH-dependent FMN reductase APS58_RS21475 PF08267 Cobalamin-independent synthase, N-terminal domain APS58_RS21475 PF01717 Cobalamin-independent synthase, Catalytic domain APS58_RS21505 PF00849 RNA pseudouridylate synthase APS58_RS21510 PF05170 AsmA family APS58_RS21515 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS58_RS21515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS58_RS21515 PF14579 Helix-hairpin-helix motif APS58_RS21515 PF02811 PHP domain APS58_RS21530 PF00719 Inorganic pyrophosphatase APS58_RS21535 PF03030 Inorganic H+ pyrophosphatase APS58_RS21555 PF00171 Aldehyde dehydrogenase family APS58_RS21560 PF02535 ZIP Zinc transporter APS58_RS21565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APS58_RS21565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APS58_RS21580 PF06463 Molybdenum Cofactor Synthesis C APS58_RS21580 PF04055 Radical SAM superfamily APS58_RS21585 PF12804 MobA-like NTP transferase domain APS58_RS21595 PF03453 MoeA N-terminal region (domain I and II) APS58_RS21595 PF03454 MoeA C-terminal region (domain IV) APS58_RS21595 PF00994 Probable molybdopterin binding domain APS58_RS21610 PF00075 RNase H APS58_RS21615 PF08241 Methyltransferase domain APS58_RS21620 PF16123 Hydroxyacylglutathione hydrolase C-terminus APS58_RS21620 PF00753 Metallo-beta-lactamase superfamily APS58_RS21625 PF01464 Transglycosylase SLT domain APS58_RS21625 PF01476 LysM domain APS58_RS21645 PF13662 Toprim domain APS58_RS21645 PF02132 RecR protein APS58_RS21650 PF02575 YbaB/EbfC DNA-binding family APS58_RS21655 PF12169 DNA polymerase III subunits gamma and tau domain III APS58_RS21655 PF12170 DNA polymerase III tau subunit V interacting with alpha APS58_RS21655 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding APS58_RS21660 PF08269 Cache domain APS58_RS21660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS58_RS21675 PF13361 UvrD-like helicase C-terminal domain APS58_RS21675 PF12705 PD-(D/E)XK nuclease superfamily APS58_RS21675 PF00580 UvrD/REP helicase N-terminal domain APS58_RS21685 PF00085 Thioredoxin APS58_RS21690 PF07497 Rho termination factor, RNA-binding domain APS58_RS21690 PF07498 Rho termination factor, N-terminal domain APS58_RS21690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS58_RS21695 PF13476 AAA domain APS58_RS21700 PF00149 Calcineurin-like phosphoesterase APS58_RS21700 PF12320 Type 5 capsule protein repressor C-terminal domain APS58_RS21705 PF01197 Ribosomal protein L31 APS58_RS21715 PF01554 MatE APS58_RS21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS58_RS21720 PF00512 His Kinase A (phospho-acceptor) domain APS58_RS21720 PF00989 PAS fold APS58_RS21720 PF11808 Phosphate regulon sensor protein PhoR APS58_RS21725 PF00486 Transcriptional regulatory protein, C terminal APS58_RS21725 PF00072 Response regulator receiver domain APS58_RS21730 PF01895 PhoU domain APS58_RS21735 PF00005 ABC transporter APS58_RS21740 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS21745 PF00528 Binding-protein-dependent transport system inner membrane component APS58_RS21750 PF12849 PBP superfamily domain APS58_RS21755 PF02541 Ppx/GppA phosphatase family APS58_RS21765 PF00300 Histidine phosphatase superfamily (branch 1) APS58_RS21770 PF02503 Polyphosphate kinase middle domain APS58_RS21770 PF13089 Polyphosphate kinase N-terminal domain APS58_RS21770 PF17941 Polyphosphate kinase C-terminal domain 1 APS58_RS21770 PF13090 Polyphosphate kinase C-terminal domain 2 APS58_RS21780 PF03707 Bacterial signalling protein N terminal repeat APS58_RS21780 PF00990 Diguanylate cyclase, GGDEF domain APS58_RS21780 PF00563 EAL domain APS58_RS21785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS58_RS21785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS58_RS21785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS58_RS21785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS58_RS21790 PF00809 Pterin binding enzyme APS58_RS21795 PF06480 FtsH Extracellular APS58_RS21795 PF00004 ATPase family associated with various cellular activities (AAA) APS58_RS21795 PF17862 AAA+ lid domain APS58_RS21795 PF01434 Peptidase family M41 APS58_RS21800 PF01728 FtsJ-like methyltransferase APS58_RS21805 PF01985 CRS1 / YhbY (CRM) domain APS58_RS21820 PF01272 Transcription elongation factor, GreA/GreB, C-term APS58_RS21820 PF03449 Transcription elongation factor, N-terminal APS58_RS21825 PF02142 MGS-like domain APS58_RS21825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS58_RS21825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS58_RS21830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APS58_RS21830 PF00117 Glutamine amidotransferase class-I APS58_RS21840 PF00324 Amino acid permease APS58_RS21855 PF00171 Aldehyde dehydrogenase family APS58_RS21865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS58_RS21865 PF02770 Acyl-CoA dehydrogenase, middle domain APS58_RS21865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS58_RS21875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS58_RS21875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS58_RS21880 PF00080 Copper/zinc superoxide dismutase (SODC) APS58_RS21885 PF00593 TonB dependent receptor APS58_RS21885 PF07715 TonB-dependent Receptor Plug Domain APS58_RS21890 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS21900 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APS58_RS21900 PF08666 SAF domain APS58_RS21905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS58_RS21915 PF03480 Bacterial extracellular solute-binding protein, family 7 APS58_RS21925 PF01370 NAD dependent epimerase/dehydratase family APS58_RS21935 PF03401 Tripartite tricarboxylate transporter family receptor APS58_RS21940 PF00701 Dihydrodipicolinate synthetase family APS58_RS21960 PF00082 Subtilase family APS58_RS21980 PF00376 MerR family regulatory protein APS58_RS21980 PF09278 MerR, DNA binding APS58_RS21985 PF07690 Major Facilitator Superfamily APS58_RS22000 PF01361 Tautomerase enzyme APS58_RS22005 PF02798 Glutathione S-transferase, N-terminal domain APS58_RS22005 PF00043 Glutathione S-transferase, C-terminal domain APS58_RS22010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS58_RS22010 PF03466 LysR substrate binding domain APS58_RS22015 PF00180 Isocitrate/isopropylmalate dehydrogenase APS58_RS22035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APS58_RS22035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APS58_RS22040 PF13742 OB-fold nucleic acid binding domain APS58_RS22040 PF02601 Exonuclease VII, large subunit APS58_RS22045 PF01618 MotA/TolQ/ExbB proton channel family APS58_RS22050 PF02472 Biopolymer transport protein ExbD/TolR APS58_RS22055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APS58_RS22060 PF03966 Trm112p-like protein APS58_RS22065 PF02348 Cytidylyltransferase APS58_RS22070 PF05191 Adenylate kinase, active site lid APS58_RS22075 PF03135 CagE, TrbE, VirB family, component of type IV transporter system APS58_RS22095 PF04335 VirB8 protein APS58_RS22100 PF03524 Conjugal transfer protein APS58_RS22105 PF03743 Bacterial conjugation TrbI-like protein APS58_RS22110 PF00437 Type II/IV secretion system protein APS58_RS22115 PF02534 Type IV secretory system Conjugative DNA transfer APS58_RS22120 PF00691 OmpA family APS58_RS22210 PF06067 Domain of unknown function (DUF932) APS58_RS22290 PF17762 HTH domain found in ParB protein APS58_RS22290 PF02195 ParB-like nuclease domain APS58_RS22295 PF13614 AAA domain APS58_RS22300 PF02661 Fic/DOC family APS58_RS22300 PF17841 BID domain of Bartonella effector protein (Bep) APS58_RS22320 PF00717 Peptidase S24-like APS58_RS22325 PF00817 impB/mucB/samB family APS58_RS22325 PF13438 Domain of unknown function (DUF4113) APS58_RS22325 PF11799 impB/mucB/samB family C-terminal domain APS58_RS22340 PF01464 Transglycosylase SLT domain APS58_RS22350 PF05101 Type IV secretory pathway, VirB3-like protein