locus-tag	class	description
CBP34_RS00050	COG2824	Alkylphosphonate utilization operon protein PhnA
CBP34_RS00075	COG0791	NLP P60 protein
CBP34_RS00080	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CBP34_RS00100	COG2974	May be involved in recombination
CBP34_RS00105	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CBP34_RS00110	COG1741	Belongs to the pirin family
CBP34_RS00115	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS00120	COG0183	Belongs to the thiolase family
CBP34_RS00125	COG1024	Enoyl-CoA hydratase
CBP34_RS00165	COG0789	Transcriptional regulator
CBP34_RS00170	COG2608	mercury ion transmembrane transporter activity
CBP34_RS00180	COG0840	transmembrane signaling receptor activity
CBP34_RS00185	COG1902	pentaerythritol trinitrate reductase activity
CBP34_RS00190	COG0625	glutathione transferase activity
CBP34_RS00205	COG0445	tRNA wobble uridine modification
CBP34_RS00210	COG0357	Ribosomal RNA small subunit methyltransferase G
CBP34_RS00220	COG1192	Involved in chromosome partitioning
CBP34_RS00230	COG1475	DNA binding
CBP34_RS00240	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBP34_RS00270	COG3639	organic phosphonate transmembrane transporter activity
CBP34_RS00275	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CBP34_RS00285	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CBP34_RS00290	COG0277	FAD linked oxidase domain protein
CBP34_RS00300	COG2096	Adenosyltransferase
CBP34_RS00305	COG2050	protein possibly involved in aromatic compounds catabolism
CBP34_RS00315	COG2233	PERMEase
CBP34_RS00320	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CBP34_RS00325	COG0583	DNA-binding transcription factor activity
CBP34_RS00335	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBP34_RS00340	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS00345	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS00350	COG1024	Enoyl-CoA hydratase
CBP34_RS00355	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBP34_RS00370	COG1183	phosphatidylcholine synthase activity
CBP34_RS00380	COG0840	transmembrane signaling receptor activity
CBP34_RS00395	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CBP34_RS00400	COG0850	regulation of cytokinetic process
CBP34_RS00410	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CBP34_RS00415	COG2258	MOSC domain
CBP34_RS00420	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBP34_RS00425	COG2267	carboxylic ester hydrolase activity
CBP34_RS00430	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CBP34_RS00445	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CBP34_RS00450	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CBP34_RS00475	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CBP34_RS00480	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CBP34_RS00485	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CBP34_RS00490	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS00510	COG0724	RNA recognition motif
CBP34_RS00545	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBP34_RS00550	COG0583	DNA-binding transcription factor activity
CBP34_RS00560	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS00580	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS00590	COG0183	Belongs to the thiolase family
CBP34_RS00600	COG1024	Enoyl-CoA hydratase
CBP34_RS00605	COG2030	dehydratase
CBP34_RS00610	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS00615	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CBP34_RS00620	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS00650	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBP34_RS00660	COG1024	Enoyl-CoA hydratase
CBP34_RS00670	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS00680	COG1024	Enoyl-CoA hydratase
CBP34_RS00695	COG0183	Belongs to the thiolase family
CBP34_RS00730	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS00735	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS00740	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CBP34_RS00745	COG2326	polyphosphate kinase activity
CBP34_RS00760	COG1410	methionine synthase
CBP34_RS00760	COG0646	methionine synthase
CBP34_RS00770	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CBP34_RS00785	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS00790	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS00800	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CBP34_RS00810	COG1846	Transcriptional regulator
CBP34_RS00840	COG0840	transmembrane signaling receptor activity
CBP34_RS00845	COG0606	chelatase, subunit chli
CBP34_RS00855	COG0347	Belongs to the P(II) protein family
CBP34_RS00865	COG0277	FAD linked oxidase domain protein
CBP34_RS00875	COG0247	lactate metabolic process
CBP34_RS00890	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CBP34_RS00900	COG1278	Cold shock
CBP34_RS00910	COG0386	Belongs to the glutathione peroxidase family
CBP34_RS00930	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CBP34_RS00940	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CBP34_RS00945	COG0747	negative chemotaxis
CBP34_RS00995	COG2070	2-Nitropropane dioxygenase
CBP34_RS01010	COG0745	RESPONSE REGULATOR receiver
CBP34_RS01015	COG2211	Major facilitator Superfamily
CBP34_RS01030	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CBP34_RS01035	COG1802	Transcriptional regulator
CBP34_RS01120	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBP34_RS01140	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CBP34_RS01145	COG0708	Exodeoxyribonuclease III
CBP34_RS01150	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CBP34_RS01160	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CBP34_RS01165	COG0154	amidase activity
CBP34_RS01170	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CBP34_RS01175	COG1077	Cell shape determining protein MreB Mrl
CBP34_RS01180	COG1792	Involved in formation and maintenance of cell shape
CBP34_RS01190	COG0768	penicillin binding
CBP34_RS01210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CBP34_RS01220	COG0004	ammonium transporteR
CBP34_RS01235	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CBP34_RS01240	COG1127	ABC transporter
CBP34_RS01255	COG3237	CsbD-like
CBP34_RS01280	COG1272	protein, Hemolysin III
CBP34_RS01285	COG2095	MarC family integral membrane protein
CBP34_RS01290	COG0412	Dienelactone hydrolase
CBP34_RS01305	COG1981	membrane
CBP34_RS01320	COG2945	thiolester hydrolase activity
CBP34_RS01325	COG1686	Belongs to the peptidase S11 family
CBP34_RS01330	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CBP34_RS01335	COG0049	tRNA binding
CBP34_RS01340	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CBP34_RS01345	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CBP34_RS01350	COG0051	transcription antitermination factor activity, RNA binding
CBP34_RS01355	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CBP34_RS01360	COG0088	Forms part of the polypeptide exit tunnel
CBP34_RS01365	COG0089	rRNA binding
CBP34_RS01370	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CBP34_RS01375	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CBP34_RS01380	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CBP34_RS01385	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CBP34_RS01390	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CBP34_RS01395	COG0255	Belongs to the universal ribosomal protein uL29 family
CBP34_RS01400	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CBP34_RS01405	COG0678	peroxiredoxin activity
CBP34_RS01425	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS01430	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CBP34_RS01445	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CBP34_RS01450	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CBP34_RS01460	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CBP34_RS01465	COG0321	lipoyl(octanoyl) transferase activity
CBP34_RS01470	COG2921	Belongs to the UPF0250 family
CBP34_RS01480	COG0356	it plays a direct role in the translocation of protons across the membrane
CBP34_RS01490	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CBP34_RS01495	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CBP34_RS01500	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CBP34_RS01505	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CBP34_RS01510	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CBP34_RS01515	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CBP34_RS01575	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CBP34_RS01585	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CBP34_RS01595	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CBP34_RS01600	COG0081	regulation of translation
CBP34_RS01605	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CBP34_RS01610	COG0222	ribosome binding
CBP34_RS01615	COG0085	RNA polymerase activity
CBP34_RS01620	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CBP34_RS01630	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CBP34_RS01630	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CBP34_RS01640	COG5000	phosphorelay sensor kinase activity
CBP34_RS01645	COG2204	response regulator
CBP34_RS01655	COG0443	Heat shock 70 kDa protein
CBP34_RS01660	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS01665	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CBP34_RS01670	COG0463	Glycosyl transferase, family 2
CBP34_RS01680	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CBP34_RS01685	COG0792	nuclease activity
CBP34_RS01690	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CBP34_RS01695	COG2823	Periplasmic or secreted lipoprotein
CBP34_RS01700	COG2084	Dehydrogenase
CBP34_RS01710	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CBP34_RS01730	COG2733	membrane
CBP34_RS01740	COG0583	DNA-binding transcription factor activity
CBP34_RS01760	COG5002	protein histidine kinase activity
CBP34_RS01760	COG2205	protein histidine kinase activity
CBP34_RS01760	COG0784	Response regulator, receiver
CBP34_RS01765	COG2197	response regulator
CBP34_RS01775	COG2223	nitrite transmembrane transporter activity
CBP34_RS01790	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CBP34_RS01795	COG2181	nitrate reductase activity
CBP34_RS01800	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CBP34_RS01805	COG0288	reversible hydration of carbon dioxide
CBP34_RS01810	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CBP34_RS01830	COG3945	hemerythrin HHE cation binding domain
CBP34_RS01860	COG1309	transcriptional regulator
CBP34_RS01865	COG1979	alcohol dehydrogenase
CBP34_RS01875	COG0243	molybdopterin cofactor binding
CBP34_RS01890	COG1473	amidohydrolase
CBP34_RS01935	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CBP34_RS01940	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CBP34_RS01945	COG1609	Transcriptional regulator
CBP34_RS01950	COG3624	Phosphonate C-P lyase system protein PhnG
CBP34_RS01960	COG3626	phosphonate metabolism
CBP34_RS01965	COG3627	carbon phosphorus lyase activity
CBP34_RS01975	COG4107	phosphonate C-P lyase system protein PhnK
CBP34_RS01980	COG4778	phosphonate C-P lyase system protein PhnL
CBP34_RS01985	COG3454	Phosphonate metabolism
CBP34_RS01990	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CBP34_RS01995	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CBP34_RS02000	COG3639	organic phosphonate transmembrane transporter activity
CBP34_RS02010	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CBP34_RS02055	COG1022	Amp-dependent synthetase and ligase
CBP34_RS02060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CBP34_RS02080	COG1187	pseudouridine synthase activity
CBP34_RS02085	COG0326	Molecular chaperone. Has ATPase activity
CBP34_RS02095	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CBP34_RS02100	COG0515	serine threonine protein kinase
CBP34_RS02100	COG2815	serine threonine protein kinase
CBP34_RS02110	COG1764	response to oxidative stress
CBP34_RS02115	COG1846	Transcriptional regulator
CBP34_RS02120	COG1250	3-hydroxyacyl-CoA dehydrogenase
CBP34_RS02145	COG0842	Transport permease protein
CBP34_RS02150	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CBP34_RS02155	COG1131	(ABC) transporter
CBP34_RS02160	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CBP34_RS02175	COG0513	Belongs to the DEAD box helicase family
CBP34_RS02180	COG1490	D-aminoacyl-tRNA deacylase activity
CBP34_RS02185	COG0589	response to stress
CBP34_RS02190	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CBP34_RS02195	COG0730	response to heat
CBP34_RS02200	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CBP34_RS02210	COG3346	SURF1 family
CBP34_RS02215	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CBP34_RS02220	COG1845	cytochrome c oxidase, subunit III
CBP34_RS02225	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CBP34_RS02230	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CBP34_RS02235	COG0477	Major facilitator Superfamily
CBP34_RS02240	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CBP34_RS02245	COG1702	phosphate starvation-inducible protein PhoH
CBP34_RS02250	COG0632	four-way junction helicase activity
CBP34_RS02275	COG2255	four-way junction helicase activity
CBP34_RS02285	COG4591	ABC-type transport system involved in lipoprotein release permease component
CBP34_RS02290	COG1136	(ABC) transporter
CBP34_RS02300	COG0535	radical SAM domain protein
CBP34_RS02330	COG1648	precorrin-2 dehydrogenase activity
CBP34_RS02330	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CBP34_RS02365	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS02385	COG0617	tRNA 3'-terminal CCA addition
CBP34_RS02400	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CBP34_RS02415	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS02425	COG3186	Phenylalanine-4-hydroxylase
CBP34_RS02440	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CBP34_RS02445	COG1522	sequence-specific DNA binding
CBP34_RS02480	COG0752	glycyl-tRNA synthetase alpha subunit
CBP34_RS02485	COG0751	glycine-tRNA ligase activity
CBP34_RS02490	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CBP34_RS02510	COG1652	LysM domain
CBP34_RS02515	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CBP34_RS02565	COG1216	Glycosyl transferase, family 2
CBP34_RS02565	COG0438	transferase activity, transferring glycosyl groups
CBP34_RS02590	COG2755	lipolytic protein G-D-S-L family
CBP34_RS02590	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CBP34_RS02625	COG4969	Belongs to the N-Me-Phe pilin family
CBP34_RS02630	COG2165	general secretion pathway protein
CBP34_RS02640	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CBP34_RS02660	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CBP34_RS02665	COG0745	RESPONSE REGULATOR receiver
CBP34_RS02670	COG0642	Histidine kinase
CBP34_RS02685	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS02695	COG1024	Enoyl-CoA hydratase
CBP34_RS02695	COG1250	3-hydroxyacyl-CoA dehydrogenase
CBP34_RS02705	COG0183	Belongs to the thiolase family
CBP34_RS02715	COG1024	Enoyl-CoA hydratase
CBP34_RS02740	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CBP34_RS02755	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CBP34_RS02760	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CBP34_RS02760	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CBP34_RS02770	COG0583	DNA-binding transcription factor activity
CBP34_RS02785	COG0765	amino acid transport
CBP34_RS02790	COG0765	amino acid transport
CBP34_RS02795	COG1126	abc transporter atp-binding protein
CBP34_RS02805	COG0418	dihydroorotase activity
CBP34_RS02815	COG0501	Belongs to the peptidase M48B family
CBP34_RS02820	COG0471	metal ion transport
CBP34_RS02825	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
CBP34_RS02835	COG2814	Major facilitator Superfamily
CBP34_RS02840	COG1566	PFAM secretion protein HlyD family protein
CBP34_RS02870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CBP34_RS02875	COG1408	metallophosphoesterase
CBP34_RS02880	COG0625	glutathione transferase activity
CBP34_RS02885	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CBP34_RS02895	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CBP34_RS02900	COG0789	Transcriptional regulator
CBP34_RS02910	COG0523	cobalamin synthesis protein
CBP34_RS02925	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CBP34_RS02930	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CBP34_RS02935	COG2001	Belongs to the MraZ family
CBP34_RS02940	COG0275	rRNA processing
CBP34_RS02955	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CBP34_RS02960	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CBP34_RS02965	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CBP34_RS02970	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CBP34_RS02975	COG0772	Belongs to the SEDS family
CBP34_RS02980	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CBP34_RS02985	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CBP34_RS02990	COG1181	Belongs to the D-alanine--D-alanine ligase family
CBP34_RS02995	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CBP34_RS03010	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CBP34_RS03015	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CBP34_RS03020	COG0840	transmembrane signaling receptor activity
CBP34_RS03090	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CBP34_RS03095	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CBP34_RS03100	COG1765	OsmC-like protein
CBP34_RS03105	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CBP34_RS03125	COG1473	amidohydrolase
CBP34_RS03135	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CBP34_RS03140	COG0444	Belongs to the ABC transporter superfamily
CBP34_RS03145	COG4608	Belongs to the ABC transporter superfamily
CBP34_RS03150	COG0583	DNA-binding transcription factor activity
CBP34_RS03160	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS03165	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS03170	COG1024	Enoyl-CoA hydratase
CBP34_RS03175	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBP34_RS03210	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CBP34_RS03220	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CBP34_RS03225	COG0166	Belongs to the GPI family
CBP34_RS03235	COG0129	dihydroxy-acid dehydratase activity
CBP34_RS03240	COG0800	Aldolase
CBP34_RS03265	COG1858	cytochrome C peroxidase
CBP34_RS03275	COG0459	protein refolding
CBP34_RS03280	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CBP34_RS03305	COG3045	CreA protein
CBP34_RS03315	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CBP34_RS03315	COG0189	ligase activity
CBP34_RS03365	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CBP34_RS03380	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CBP34_RS03385	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CBP34_RS03395	COG0557	exoribonuclease II activity
CBP34_RS03400	COG1595	DNA-templated transcription, initiation
CBP34_RS03410	COG3474	cytochrome
CBP34_RS03420	COG3150	esterase
CBP34_RS03425	COG2815	serine threonine protein kinase
CBP34_RS03425	COG0515	serine threonine protein kinase
CBP34_RS03430	COG0772	Belongs to the SEDS family
CBP34_RS03435	COG3422	double-strand break repair
CBP34_RS03440	COG0312	modulator of DNA gyrase
CBP34_RS03460	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CBP34_RS03470	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CBP34_RS03475	COG0511	ligase activity, forming carbon-carbon bonds
CBP34_RS03485	COG2264	protein methyltransferase activity
CBP34_RS03495	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CBP34_RS03505	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CBP34_RS03535	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CBP34_RS03540	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CBP34_RS03545	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CBP34_RS03560	COG1024	Enoyl-CoA hydratase
CBP34_RS03580	COG3217	Mosc domain protein beta barrel domain protein
CBP34_RS03580	COG0633	Ferredoxin
CBP34_RS03585	COG0012	GTP binding
CBP34_RS03595	COG1136	(ABC) transporter
CBP34_RS03615	COG1238	metal cluster binding
CBP34_RS03625	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CBP34_RS03630	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CBP34_RS03635	COG0138	bifunctional purine biosynthesis protein purh
CBP34_RS03645	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS03650	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CBP34_RS03660	COG1773	rubredoxin
CBP34_RS03685	COG0643	Histidine kinase
CBP34_RS03685	COG0784	Response regulator, receiver
CBP34_RS03685	COG2198	Histidine kinase
CBP34_RS03685	COG0643	Histidine kinase
CBP34_RS03685	COG0784	Response regulator, receiver
CBP34_RS03685	COG2198	Histidine kinase
CBP34_RS03700	COG1678	Uncharacterized ACR, COG1678
CBP34_RS03705	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CBP34_RS03710	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CBP34_RS03715	COG0540	Belongs to the ATCase OTCase family
CBP34_RS03720	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CBP34_RS03735	COG1178	ABC-type Fe3 transport system permease component
CBP34_RS03810	COG1414	Transcriptional regulator
CBP34_RS03820	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CBP34_RS03825	COG0183	Belongs to the thiolase family
CBP34_RS03830	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CBP34_RS03840	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS03855	COG1280	lysine exporter protein (LysE YggA)
CBP34_RS03875	COG0583	DNA-binding transcription factor activity
CBP34_RS03880	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CBP34_RS03885	COG1040	competence protein
CBP34_RS03890	COG2226	methyltransferase
CBP34_RS03905	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CBP34_RS03910	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CBP34_RS03920	COG1845	cytochrome c oxidase, subunit III
CBP34_RS03945	COG0109	protoheme IX farnesyltransferase activity
CBP34_RS03950	COG1999	signal sequence binding
CBP34_RS03960	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CBP34_RS03965	COG1324	tolerance protein
CBP34_RS03985	COG0742	ribosomal rna small subunit methyltransferase
CBP34_RS03990	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CBP34_RS04025	COG2197	response regulator
CBP34_RS04040	COG0793	Belongs to the peptidase S41A family
CBP34_RS04045	COG0588	phosphoglycerate mutase activity
CBP34_RS04060	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CBP34_RS04065	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CBP34_RS04075	COG0583	DNA-binding transcription factor activity
CBP34_RS04080	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CBP34_RS04085	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CBP34_RS04100	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBP34_RS04125	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CBP34_RS04130	COG0720	synthase
CBP34_RS04135	COG0602	queuosine metabolic process
CBP34_RS04155	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CBP34_RS04160	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CBP34_RS04180	COG0028	Belongs to the TPP enzyme family
CBP34_RS04190	COG0659	secondary active sulfate transmembrane transporter activity
CBP34_RS04200	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CBP34_RS04200	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CBP34_RS04215	COG0489	protein tyrosine kinase activity
CBP34_RS04230	COG3383	formate dehydrogenase (NAD+) activity
CBP34_RS04260	COG0243	molybdopterin cofactor binding
CBP34_RS04260	COG3383	formate dehydrogenase (NAD+) activity
CBP34_RS04265	COG0437	4 iron, 4 sulfur cluster binding
CBP34_RS04290	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CBP34_RS04305	COG1704	LemA family
CBP34_RS04310	COG0501	Belongs to the peptidase M48B family
CBP34_RS04320	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CBP34_RS04325	COG0830	nickel cation binding
CBP34_RS04330	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
CBP34_RS04340	COG0804	urea catabolic process
CBP34_RS04345	COG0832	Belongs to the urease beta subunit family
CBP34_RS04355	COG0831	urea catabolic process
CBP34_RS04370	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CBP34_RS04400	COG0829	nickel cation binding
CBP34_RS04410	COG3622	Belongs to the hyi family
CBP34_RS04415	COG0235	Class ii aldolase
CBP34_RS04420	COG3395	kinase activity
CBP34_RS04425	COG2084	Dehydrogenase
CBP34_RS04430	COG2610	gluconate transmembrane transporter activity
CBP34_RS04435	COG2186	Transcriptional regulator
CBP34_RS04440	COG1752	Esterase of the alpha-beta hydrolase superfamily
CBP34_RS04445	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBP34_RS04450	COG1116	anion transmembrane transporter activity
CBP34_RS04460	COG0281	malic enzyme
CBP34_RS04460	COG0280	phosphate acetyltransferase
CBP34_RS04470	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CBP34_RS04510	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBP34_RS04530	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CBP34_RS04540	COG3447	MASE1 domain protein
CBP34_RS04540	COG5002	protein histidine kinase activity
CBP34_RS04540	COG5001	Diguanylate cyclase
CBP34_RS04545	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS04560	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CBP34_RS04570	COG3845	ABC transporter
CBP34_RS04575	COG4603	Belongs to the binding-protein-dependent transport system permease family
CBP34_RS04590	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CBP34_RS04595	COG0537	adenosine 5'-monophosphoramidase activity
CBP34_RS04620	COG0402	S-adenosylhomocysteine deaminase activity
CBP34_RS04625	COG0717	Belongs to the dCTP deaminase family
CBP34_RS04630	COG3706	GGDEF domain
CBP34_RS04635	COG2423	ornithine cyclodeaminase activity
CBP34_RS04640	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CBP34_RS04645	COG2321	neutral zinc metallopeptidase
CBP34_RS04650	COG0513	Belongs to the DEAD box helicase family
CBP34_RS04665	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CBP34_RS04685	COG4263	nitrous-oxide reductase activity
CBP34_RS04695	COG3245	cytochrome
CBP34_RS04705	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CBP34_RS04710	COG1253	flavin adenine dinucleotide binding
CBP34_RS04715	COG2916	Histone family protein nucleoid-structuring protein H-NS
CBP34_RS04720	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CBP34_RS04725	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBP34_RS04735	COG3483	tryptophan 2,3-dioxygenase activity
CBP34_RS04765	COG3706	GGDEF domain
CBP34_RS04775	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CBP34_RS04780	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CBP34_RS04790	COG0268	Binds directly to 16S ribosomal RNA
CBP34_RS04795	COG0728	peptidoglycan biosynthetic process
CBP34_RS04805	COG0589	response to stress
CBP34_RS04830	COG0840	transmembrane signaling receptor activity
CBP34_RS04840	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CBP34_RS04845	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CBP34_RS04865	COG0463	Glycosyl transferase, family 2
CBP34_RS04935	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS04985	COG3328	transposase activity
CBP34_RS05060	COG2828	Protein conserved in bacteria
CBP34_RS05065	COG2159	amidohydrolase
CBP34_RS05120	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBP34_RS05140	COG2146	nitrite reductase [NAD(P)H] activity
CBP34_RS05145	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CBP34_RS05145	COG0543	2 iron, 2 sulfur cluster binding
CBP34_RS05200	COG0346	lactoylglutathione lyase activity
CBP34_RS05205	COG1012	belongs to the aldehyde dehydrogenase family
CBP34_RS05235	COG0730	response to heat
CBP34_RS05260	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBP34_RS05270	COG3971	2-oxopent-4-enoate hydratase activity
CBP34_RS05300	COG4638	Rieske (2fe-2S)
CBP34_RS05330	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS05400	COG2948	multi-organism process
CBP34_RS05415	COG2816	NAD+ diphosphatase activity
CBP34_RS05420	COG0425	Belongs to the sulfur carrier protein TusA family
CBP34_RS05425	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CBP34_RS05430	COG0525	valine-tRNA ligase activity
CBP34_RS05435	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS05450	COG3038	cytochrome b561
CBP34_RS05470	COG0181	hydroxymethylbilane synthase activity
CBP34_RS05475	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CBP34_RS05480	COG0628	permease
CBP34_RS05515	COG1722	exodeoxyribonuclease VII activity
CBP34_RS05525	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CBP34_RS05530	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CBP34_RS05535	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CBP34_RS05560	COG1122	ATPase activity
CBP34_RS05575	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CBP34_RS05580	COG4178	(ABC) transporter
CBP34_RS05620	COG3608	succinylglutamate desuccinylase aspartoacylase
CBP34_RS05620	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CBP34_RS05635	COG1234	tRNA 3'-trailer cleavage
CBP34_RS05645	COG1116	anion transmembrane transporter activity
CBP34_RS05650	COG1280	lysine exporter protein (LysE YggA)
CBP34_RS05655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBP34_RS05665	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CBP34_RS05675	COG2721	sulfolactate sulfo-lyase activity
CBP34_RS05680	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CBP34_RS05690	COG3386	PFAM SMP-30 Gluconolaconase
CBP34_RS05705	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CBP34_RS05710	COG2186	Transcriptional regulator
CBP34_RS05725	COG1968	undecaprenyl-diphosphatase activity
CBP34_RS05740	COG5001	Diguanylate cyclase
CBP34_RS05755	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CBP34_RS05760	COG0483	inositol monophosphate 1-phosphatase activity
CBP34_RS05775	COG1045	serine acetyltransferase
CBP34_RS05780	COG1063	alcohol dehydrogenase
CBP34_RS05785	COG0521	Mo-molybdopterin cofactor biosynthetic process
CBP34_RS05790	COG3028	Belongs to the UPF0307 family
CBP34_RS05795	COG0312	modulator of DNA gyrase
CBP34_RS05815	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CBP34_RS05820	COG2081	HI0933 family
CBP34_RS05825	COG1607	acyl-coa hydrolase
CBP34_RS05835	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CBP34_RS05840	COG0243	molybdopterin cofactor binding
CBP34_RS05850	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CBP34_RS05860	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CBP34_RS05870	COG2205	protein histidine kinase activity
CBP34_RS05875	COG0745	RESPONSE REGULATOR receiver
CBP34_RS05890	COG0517	IMP dehydrogenase activity
CBP34_RS05895	COG1116	anion transmembrane transporter activity
CBP34_RS05900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBP34_RS05925	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CBP34_RS05935	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBP34_RS05940	COG1136	(ABC) transporter
CBP34_RS05940	COG0577	efflux transmembrane transporter activity
CBP34_RS05945	COG1136	(ABC) transporter
CBP34_RS05945	COG0577	efflux transmembrane transporter activity
CBP34_RS05960	COG0683	leucine binding
CBP34_RS05965	COG0842	Transport permease protein
CBP34_RS05970	COG1131	(ABC) transporter
CBP34_RS05990	COG0714	Associated with various cellular activities
CBP34_RS05995	COG0123	including yeast histone deacetylase and acetoin utilization protein
CBP34_RS06000	COG1024	Enoyl-CoA hydratase
CBP34_RS06005	COG3264	Mechanosensitive ion channel
CBP34_RS06005	COG1196	nuclear chromosome segregation
CBP34_RS06020	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS06035	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CBP34_RS06050	COG0583	DNA-binding transcription factor activity
CBP34_RS06055	COG2194	sulfuric ester hydrolase activity
CBP34_RS06060	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CBP34_RS06070	COG0372	Belongs to the citrate synthase family
CBP34_RS06075	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CBP34_RS06080	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CBP34_RS06085	COG1053	succinate dehydrogenase
CBP34_RS06090	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CBP34_RS06100	COG2188	Transcriptional regulator
CBP34_RS06105	COG0039	L-malate dehydrogenase activity
CBP34_RS06130	COG0826	peptidase U32
CBP34_RS06150	COG0824	Thioesterase
CBP34_RS06155	COG0436	Aminotransferase
CBP34_RS06160	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CBP34_RS06165	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CBP34_RS06195	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS06205	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CBP34_RS06225	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS06240	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CBP34_RS06250	COG0564	pseudouridine synthase activity
CBP34_RS06270	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CBP34_RS06295	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CBP34_RS06340	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CBP34_RS06355	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CBP34_RS06365	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CBP34_RS06380	COG3384	dioxygenase
CBP34_RS06390	COG3228	Belongs to the MtfA family
CBP34_RS06395	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CBP34_RS06400	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CBP34_RS06415	COG0215	cysteine-tRNA ligase activity
CBP34_RS06425	COG0825	malonyl-CoA metabolic process
CBP34_RS06430	COG0037	tRNA processing
CBP34_RS06435	COG0527	aspartate kinase activity
CBP34_RS06540	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CBP34_RS06560	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CBP34_RS06565	COG0642	Histidine kinase
CBP34_RS06575	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS06590	COG2204	response regulator
CBP34_RS06645	COG0415	Belongs to the DNA photolyase family
CBP34_RS06650	COG3046	protein related to deoxyribodipyrimidine photolyase
CBP34_RS06695	COG1067	ATP-dependent peptidase activity
CBP34_RS06700	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CBP34_RS06735	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CBP34_RS06740	COG1562	ergosterol biosynthetic process
CBP34_RS06765	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBP34_RS06780	COG0544	peptidyl-prolyl cis-trans isomerase activity
CBP34_RS06785	COG0740	serine-type endopeptidase activity
CBP34_RS06790	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CBP34_RS06795	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CBP34_RS06820	COG2948	multi-organism process
CBP34_RS06825	COG3504	Conjugal transfer protein
CBP34_RS06845	COG3451	type IV secretory pathway VirB4
CBP34_RS06855	COG3838	Conjugal transfer protein Trbc
CBP34_RS06860	COG4962	Type ii secretion system protein e
CBP34_RS06880	COG0583	DNA-binding transcription factor activity
CBP34_RS06885	COG2205	protein histidine kinase activity
CBP34_RS06915	COG2217	Heavy metal translocating P-type atpase
CBP34_RS06945	COG1742	UPF0060 membrane protein
CBP34_RS06950	COG0789	Transcriptional regulator
CBP34_RS06970	COG3174	membrane
CBP34_RS06990	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CBP34_RS07025	COG2326	polyphosphate kinase activity
CBP34_RS07045	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CBP34_RS07055	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CBP34_RS07060	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CBP34_RS07080	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CBP34_RS07085	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CBP34_RS07100	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
CBP34_RS07110	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CBP34_RS07115	COG0789	Transcriptional regulator
CBP34_RS07120	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CBP34_RS07125	COG1677	Flagellar hook-basal body complex protein FliE
CBP34_RS07185	COG0789	Transcriptional regulator
CBP34_RS07200	COG3328	transposase activity
CBP34_RS07275	COG1192	Involved in chromosome partitioning
CBP34_RS07320	COG5489	Protein of unknown function (DUF736)
CBP34_RS07345	COG1475	DNA binding
CBP34_RS07370	COG2003	Belongs to the UPF0758 family
CBP34_RS07405	COG1451	nucleotide metabolic process
CBP34_RS07420	COG0114	fumarate hydratase activity
CBP34_RS07425	COG2113	Glycine betaine
CBP34_RS07430	COG4176	ABC-type proline glycine betaine transport system permease component
CBP34_RS07440	COG4175	Glycine betaine
CBP34_RS07450	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CBP34_RS07460	COG4654	Cytochrome c, class I
CBP34_RS07470	COG0129	dihydroxy-acid dehydratase activity
CBP34_RS07475	COG0129	dihydroxy-acid dehydratase activity
CBP34_RS07480	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CBP34_RS07490	COG1802	Transcriptional regulator
CBP34_RS07510	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS07530	COG3278	Belongs to the heme-copper respiratory oxidase family
CBP34_RS07565	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CBP34_RS07590	COG0730	response to heat
CBP34_RS07605	COG4206	TonB-dependent receptor
CBP34_RS07620	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CBP34_RS07625	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CBP34_RS07630	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CBP34_RS07655	COG0778	Nitroreductase
CBP34_RS07660	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CBP34_RS07665	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CBP34_RS07670	COG1492	cobalamin metabolic process
CBP34_RS07675	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CBP34_RS07705	COG4829	muconolactone delta-isomerase
CBP34_RS07715	COG0583	DNA-binding transcription factor activity
CBP34_RS07720	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CBP34_RS07725	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBP34_RS07730	COG2900	Belongs to the SlyX family
CBP34_RS07735	COG0446	pyridine nucleotide-disulphide oxidoreductase
CBP34_RS07735	COG1902	pentaerythritol trinitrate reductase activity
CBP34_RS07740	COG0667	Aldo Keto reductase
CBP34_RS07750	COG0513	Belongs to the DEAD box helicase family
CBP34_RS07760	COG0023	Translation Initiation Factor
CBP34_RS07765	COG3530	Putative quorum-sensing-regulated virulence factor
CBP34_RS07770	COG0583	DNA-binding transcription factor activity
CBP34_RS07780	COG1464	Belongs to the NlpA lipoprotein family
CBP34_RS07795	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CBP34_RS07800	COG1959	2 iron, 2 sulfur cluster binding
CBP34_RS07805	COG0560	Phosphoserine phosphatase
CBP34_RS07825	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CBP34_RS07825	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CBP34_RS07830	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CBP34_RS07850	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS07860	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CBP34_RS07870	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
CBP34_RS07875	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CBP34_RS07880	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CBP34_RS07900	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBP34_RS07915	COG0778	Nitroreductase
CBP34_RS07930	COG0473	3-isopropylmalate dehydrogenase activity
CBP34_RS07935	COG0776	regulation of translation
CBP34_RS07945	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CBP34_RS07955	COG3328	transposase activity
CBP34_RS07985	COG1414	Transcriptional regulator
CBP34_RS08010	COG1024	Enoyl-CoA hydratase
CBP34_RS08015	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS08030	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBP34_RS08045	COG0322	excinuclease ABC activity
CBP34_RS08095	COG0123	including yeast histone deacetylase and acetoin utilization protein
CBP34_RS08105	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CBP34_RS08115	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CBP34_RS08130	COG1611	Belongs to the LOG family
CBP34_RS08150	COG2212	antiporter activity
CBP34_RS08155	COG1863	multisubunit Na H antiporter MnhE subunit
CBP34_RS08160	COG0651	ATP synthesis coupled electron transport
CBP34_RS08165	COG1006	Multisubunit Na H antiporter MnhC subunit
CBP34_RS08170	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CBP34_RS08170	COG2111	Na H antiporter
CBP34_RS08180	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CBP34_RS08190	COG0776	regulation of translation
CBP34_RS08205	COG0287	Prephenate dehydrogenase
CBP34_RS08210	COG1605	Chorismate mutase
CBP34_RS08210	COG0077	Prephenate dehydratase
CBP34_RS08215	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CBP34_RS08230	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CBP34_RS08250	COG3459	Glycosyltransferase 36 associated
CBP34_RS08265	COG5001	Diguanylate cyclase
CBP34_RS08280	COG0688	phosphatidylethanolamine metabolic process
CBP34_RS08290	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CBP34_RS08305	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CBP34_RS08315	COG2917	probably involved in intracellular septation
CBP34_RS08320	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CBP34_RS08325	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CBP34_RS08340	COG0559	Belongs to the binding-protein-dependent transport system permease family
CBP34_RS08350	COG0411	ABC transporter
CBP34_RS08360	COG1024	Enoyl-CoA hydratase
CBP34_RS08360	COG1250	3-hydroxyacyl-CoA dehydrogenase
CBP34_RS08365	COG0183	Belongs to the thiolase family
CBP34_RS08370	COG3328	transposase activity
CBP34_RS08375	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS08390	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS08400	COG2130	NADP-dependent
CBP34_RS08405	COG2153	protein acetylation
CBP34_RS08420	COG2814	Major facilitator Superfamily
CBP34_RS08425	COG2197	response regulator
CBP34_RS08435	COG2183	response to ionizing radiation
CBP34_RS08455	COG0657	acetylesterase activity
CBP34_RS08470	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CBP34_RS08475	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS08505	COG1619	proteins homologs of microcin C7 resistance protein MccF
CBP34_RS08545	COG1024	Enoyl-CoA hydratase
CBP34_RS08550	COG1250	3-hydroxyacyl-CoA dehydrogenase
CBP34_RS08565	COG2022	thiamine diphosphate biosynthetic process
CBP34_RS08580	COG0351	phosphomethylpyrimidine kinase
CBP34_RS08590	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CBP34_RS08595	COG0492	ferredoxin-NADP+ reductase activity
CBP34_RS08600	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CBP34_RS08605	COG0529	Catalyzes the synthesis of activated sulfate
CBP34_RS08605	COG2895	sulfate adenylyltransferase (ATP) activity
CBP34_RS08610	COG0175	sulfate reduction
CBP34_RS08615	COG0175	sulfate reduction
CBP34_RS08630	COG0730	response to heat
CBP34_RS08635	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CBP34_RS08635	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CBP34_RS08640	COG2860	membrane
CBP34_RS08645	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CBP34_RS08675	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBP34_RS08680	COG1116	anion transmembrane transporter activity
CBP34_RS08690	COG0583	DNA-binding transcription factor activity
CBP34_RS08710	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CBP34_RS08725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBP34_RS08740	COG0628	permease
CBP34_RS08745	COG0567	Dehydrogenase, E1 component
CBP34_RS08750	COG0508	dehydrogenase complex catalyzes the overall conversion of
CBP34_RS08755	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CBP34_RS08760	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CBP34_RS08770	COG0631	protein serine/threonine phosphatase activity
CBP34_RS08800	COG0542	response to heat
CBP34_RS08805	COG2951	lytic endotransglycosylase activity
CBP34_RS08820	COG0700	Nucleoside recognition
CBP34_RS08825	COG0217	transcriptional regulatory protein
CBP34_RS08830	COG0484	heat shock protein binding
CBP34_RS08850	COG3706	GGDEF domain
CBP34_RS08860	COG4771	TonB-dependent receptor
CBP34_RS08870	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CBP34_RS08885	COG0433	COG0433 Predicted ATPase
CBP34_RS08895	COG0151	Belongs to the GarS family
CBP34_RS08900	COG0408	coproporphyrinogen oxidase activity
CBP34_RS08905	COG0799	negative regulation of ribosome biogenesis
CBP34_RS08910	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CBP34_RS08915	COG0424	maF-like protein
CBP34_RS08920	COG1530	ribonuclease E activity
CBP34_RS08950	COG0436	Aminotransferase
CBP34_RS08955	COG0583	DNA-binding transcription factor activity
CBP34_RS08965	COG0795	lipopolysaccharide-transporting ATPase activity
CBP34_RS08975	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CBP34_RS08995	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CBP34_RS09000	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CBP34_RS09005	COG0252	asparaginase activity
CBP34_RS09010	COG0563	adenylate kinase activity
CBP34_RS09020	COG2835	tetraacyldisaccharide 4'-kinase activity
CBP34_RS09025	COG1663	tetraacyldisaccharide 4'-kinase activity
CBP34_RS09035	COG0811	peptide transport
CBP34_RS09040	COG1570	exodeoxyribonuclease VII activity
CBP34_RS09045	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CBP34_RS09100	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS09145	COG1196	nuclear chromosome segregation
CBP34_RS09155	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CBP34_RS09160	COG1752	Esterase of the alpha-beta hydrolase superfamily
CBP34_RS09240	COG0840	transmembrane signaling receptor activity
CBP34_RS09250	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS09255	COG0488	(ABC) transporter
CBP34_RS09260	COG2890	protein-(glutamine-N5) methyltransferase activity
CBP34_RS09265	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CBP34_RS09275	COG2171	N-acyltransferase activity
CBP34_RS09285	COG0840	transmembrane signaling receptor activity
CBP34_RS09290	COG2878	Part of a membrane complex involved in electron transport
CBP34_RS09315	COG1022	Amp-dependent synthetase and ligase
CBP34_RS09325	COG1802	Transcriptional regulator
CBP34_RS09330	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CBP34_RS09330	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CBP34_RS09335	COG1703	isobutyryl-CoA mutase activity
CBP34_RS09345	COG4770	biotin carboxylase activity
CBP34_RS09360	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CBP34_RS09380	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CBP34_RS09395	COG0446	pyridine nucleotide-disulphide oxidoreductase
CBP34_RS09410	COG0640	Transcriptional regulator
CBP34_RS09440	COG1937	Protein conserved in bacteria
CBP34_RS09505	COG0640	Transcriptional regulator
CBP34_RS09530	COG0798	PFAM Bile acid sodium symporter
CBP34_RS09535	COG0431	NADPH-dependent FMN reductase
CBP34_RS09545	COG4644	lycopene metabolic process
CBP34_RS09555	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS09560	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS09565	COG0534	Mate efflux family protein
CBP34_RS09580	COG0346	lactoylglutathione lyase activity
CBP34_RS09600	COG0589	response to stress
CBP34_RS09605	COG2032	superoxide dismutase activity
CBP34_RS09610	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CBP34_RS09625	COG0259	pyridoxamine-phosphate oxidase activity
CBP34_RS09640	COG5001	Diguanylate cyclase
CBP34_RS09640	COG2203	Gaf domain
CBP34_RS09640	COG4251	negative regulation of phosphorylation
CBP34_RS09640	COG3706	GGDEF domain
CBP34_RS09665	COG3328	transposase activity
CBP34_RS09685	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CBP34_RS09690	COG1309	transcriptional regulator
CBP34_RS09705	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CBP34_RS09715	COG1538	Outer membrane efflux protein
CBP34_RS09720	COG0045	succinate-CoA ligase (ADP-forming) activity
CBP34_RS09720	COG1042	CoA-binding domain protein
CBP34_RS09720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CBP34_RS09755	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CBP34_RS09770	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CBP34_RS09775	COG0791	NLP P60 protein
CBP34_RS09795	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CBP34_RS09800	COG3145	DNA-N1-methyladenine dioxygenase activity
CBP34_RS09815	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CBP34_RS09840	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CBP34_RS09855	COG0508	dehydrogenase complex catalyzes the overall conversion of
CBP34_RS09860	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CBP34_RS09870	COG4566	intracellular signal transduction
CBP34_RS09875	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CBP34_RS09890	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CBP34_RS09895	COG0167	dihydroorotate dehydrogenase activity
CBP34_RS09915	COG0579	oxidoreductase
CBP34_RS09935	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CBP34_RS09945	COG0443	Heat shock 70 kDa protein
CBP34_RS09950	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CBP34_RS09955	COG0316	Belongs to the HesB IscA family
CBP34_RS09960	COG0822	iron-sulfur transferase activity
CBP34_RS09965	COG1104	cysteine desulfurase activity
CBP34_RS09970	COG1959	2 iron, 2 sulfur cluster binding
CBP34_RS09975	COG0556	nucleotide-excision repair
CBP34_RS09985	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBP34_RS10000	COG1414	Transcriptional regulator
CBP34_RS10020	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS10035	COG2267	carboxylic ester hydrolase activity
CBP34_RS10045	COG1739	Uncharacterized protein family UPF0029
CBP34_RS10070	COG3550	peptidyl-serine autophosphorylation
CBP34_RS10085	COG2807	transmembrane transport
CBP34_RS10120	COG0179	Fumarylacetoacetate (FAA) hydrolase
CBP34_RS10140	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CBP34_RS10150	COG5507	3-demethylubiquinone-9 3-methyltransferase
CBP34_RS10180	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CBP34_RS10185	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CBP34_RS10190	COG4181	ATPase activity
CBP34_RS10235	COG1054	Belongs to the UPF0176 family
CBP34_RS10240	COG1741	Belongs to the pirin family
CBP34_RS10260	COG1741	Belongs to the pirin family
CBP34_RS10265	COG0583	DNA-binding transcription factor activity
CBP34_RS10275	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CBP34_RS10280	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CBP34_RS10290	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CBP34_RS10310	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CBP34_RS10345	COG0564	pseudouridine synthase activity
CBP34_RS10350	COG2982	Protein involved in outer membrane biogenesis
CBP34_RS10355	COG0587	DNA-directed DNA polymerase activity
CBP34_RS10375	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CBP34_RS10395	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CBP34_RS10415	COG0697	spore germination
CBP34_RS10420	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS10435	COG4120	Belongs to the binding-protein-dependent transport system permease family
CBP34_RS10450	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CBP34_RS10460	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CBP34_RS10460	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CBP34_RS10465	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CBP34_RS10470	COG0509	glycine decarboxylation via glycine cleavage system
CBP34_RS10475	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CBP34_RS10475	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CBP34_RS10485	COG0545	Peptidyl-prolyl cis-trans isomerase
CBP34_RS10505	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS10510	COG0183	Belongs to the thiolase family
CBP34_RS10520	COG0589	response to stress
CBP34_RS10540	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS10545	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
CBP34_RS10580	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CBP34_RS10585	COG1643	Atp-dependent helicase
CBP34_RS10590	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CBP34_RS10590	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CBP34_RS10600	COG1054	Belongs to the UPF0176 family
CBP34_RS10615	COG1902	pentaerythritol trinitrate reductase activity
CBP34_RS10625	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CBP34_RS10630	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CBP34_RS10635	COG4208	sulfate ABC transporter
CBP34_RS10645	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CBP34_RS10655	COG0450	alkyl hydroperoxide reductase
CBP34_RS10660	COG0840	transmembrane signaling receptor activity
CBP34_RS10690	COG0697	spore germination
CBP34_RS10700	COG0583	DNA-binding transcription factor activity
CBP34_RS10720	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CBP34_RS10725	COG2011	ABC-type metal ion transport system permease component
CBP34_RS10730	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CBP34_RS10815	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CBP34_RS10830	COG0823	Involved in the tonB-independent uptake of proteins
CBP34_RS10835	COG1132	(ABC) transporter
CBP34_RS10845	COG0084	hydrolase, TatD family'
CBP34_RS10860	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CBP34_RS10865	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CBP34_RS10890	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CBP34_RS10895	COG3047	cAMP biosynthetic process
CBP34_RS10900	COG2354	Protein conserved in bacteria
CBP34_RS10910	COG0047	phosphoribosylformylglycinamidine synthase activity
CBP34_RS10910	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CBP34_RS10920	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CBP34_RS10935	COG0789	Transcriptional regulator
CBP34_RS10940	COG0776	regulation of translation
CBP34_RS10945	COG0072	phenylalanine-tRNA ligase activity
CBP34_RS10945	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CBP34_RS10950	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CBP34_RS10955	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CBP34_RS10960	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CBP34_RS10965	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CBP34_RS10970	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CBP34_RS11000	COG4774	siderophore transport
CBP34_RS11005	COG3128	pkhd-type hydroxylase
CBP34_RS11040	COG3193	protein, possibly involved in utilization of glycolate and propanediol
CBP34_RS11055	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CBP34_RS11070	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CBP34_RS11070	COG0506	proline dehydrogenase activity
CBP34_RS11070	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CBP34_RS11085	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CBP34_RS11085	COG0519	Catalyzes the synthesis of GMP from XMP
CBP34_RS11100	COG2914	Belongs to the UPF0125 (RnfH) family
CBP34_RS11105	COG2867	negative regulation of translational initiation
CBP34_RS11110	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CBP34_RS11145	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CBP34_RS11150	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CBP34_RS11155	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CBP34_RS11160	COG0195	Participates in both transcription termination and antitermination
CBP34_RS11165	COG0779	Required for maturation of 30S ribosomal subunits
CBP34_RS11170	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CBP34_RS11180	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CBP34_RS11180	COG2010	Cytochrome c
CBP34_RS11190	COG0840	transmembrane signaling receptor activity
CBP34_RS11200	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
CBP34_RS11205	COG2814	Major facilitator Superfamily
CBP34_RS11210	COG0500	methyltransferase
CBP34_RS11215	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CBP34_RS11235	COG4172	Belongs to the ABC transporter superfamily
CBP34_RS11240	COG4239	(ABC) transporter, permease
CBP34_RS11245	COG4174	ABC transporter (Permease)
CBP34_RS11250	COG4166	transmembrane transport
CBP34_RS11260	COG1793	dna ligase
CBP34_RS11285	COG3328	transposase activity
CBP34_RS11305	COG4804	nuclease activity
CBP34_RS11310	COG2003	Belongs to the UPF0758 family
CBP34_RS11315	COG0431	NADPH-dependent FMN reductase
CBP34_RS11320	COG1393	Belongs to the ArsC family
CBP34_RS11325	COG0798	PFAM Bile acid sodium symporter
CBP34_RS11350	COG0640	Transcriptional regulator
CBP34_RS11405	COG5489	Protein of unknown function (DUF736)
CBP34_RS11410	COG1396	sequence-specific DNA binding
CBP34_RS11440	COG1192	Involved in chromosome partitioning
CBP34_RS11455	COG4959	Type IV secretory pathway protease TraF
CBP34_RS11475	COG2205	protein histidine kinase activity
CBP34_RS11480	COG0789	Transcriptional regulator
CBP34_RS11490	COG0642	Histidine kinase
CBP34_RS11545	COG0583	DNA-binding transcription factor activity
CBP34_RS11565	COG4962	Type ii secretion system protein e
CBP34_RS11570	COG3838	Conjugal transfer protein Trbc
CBP34_RS11580	COG3451	type IV secretory pathway VirB4
CBP34_RS11595	COG3846	protein secretion by the type IV secretion system
CBP34_RS11650	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CBP34_RS11705	COG0587	DNA-directed DNA polymerase activity
CBP34_RS11730	COG0582	viral genome integration into host DNA
CBP34_RS11780	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
CBP34_RS11800	COG3191	aminopeptidase activity
CBP34_RS11815	COG0488	(ABC) transporter
CBP34_RS11820	COG0513	Belongs to the DEAD box helicase family
CBP34_RS11830	COG4651	solute:proton antiporter activity
CBP34_RS11830	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CBP34_RS11850	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS11860	COG2944	sequence-specific DNA binding
CBP34_RS11885	COG1840	ABC-type Fe3 transport system, periplasmic component
CBP34_RS11925	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CBP34_RS11945	COG0285	dihydrofolate synthase activity
CBP34_RS11950	COG1393	Belongs to the ArsC family
CBP34_RS11960	COG3123	guanosine phosphorylase activity
CBP34_RS11965	COG0137	argininosuccinate synthase activity
CBP34_RS11970	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CBP34_RS11975	COG1666	GTP binding
CBP34_RS11980	COG3577	Aspartyl protease
CBP34_RS11990	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CBP34_RS11995	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CBP34_RS12000	COG0667	Aldo Keto reductase
CBP34_RS12005	COG2267	carboxylic ester hydrolase activity
CBP34_RS12015	COG0308	aminopeptidase N
CBP34_RS12020	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CBP34_RS12040	COG2189	Belongs to the N(4) N(6)-methyltransferase family
CBP34_RS12085	COG4974	Belongs to the 'phage' integrase family
CBP34_RS12090	COG0242	peptide deformylase activity
CBP34_RS12095	COG2832	Protein of unknown function (DUF454)
CBP34_RS12110	COG3311	Transcriptional regulator
CBP34_RS12160	COG0517	IMP dehydrogenase activity
CBP34_RS12165	COG4974	Belongs to the 'phage' integrase family
CBP34_RS12180	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CBP34_RS12185	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CBP34_RS12190	COG0583	DNA-binding transcription factor activity
CBP34_RS12200	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CBP34_RS12205	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CBP34_RS12230	COG3451	type IV secretory pathway VirB4
CBP34_RS12270	COG3505	Type IV secretory pathway VirD4
CBP34_RS12290	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
CBP34_RS12295	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CBP34_RS12300	COG4804	nuclease activity
CBP34_RS12305	COG0732	type I restriction modification DNA specificity domain
CBP34_RS12360	COG2003	Belongs to the UPF0758 family
CBP34_RS12405	COG0515	serine threonine protein kinase
CBP34_RS12420	COG2204	response regulator
CBP34_RS12450	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CBP34_RS12455	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CBP34_RS12460	COG1414	Transcriptional regulator
CBP34_RS12470	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBP34_RS12475	COG1183	phosphatidylcholine synthase activity
CBP34_RS12480	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CBP34_RS12485	COG0440	acetolactate synthase activity
CBP34_RS12490	COG0028	Belongs to the TPP enzyme family
CBP34_RS12495	COG1595	DNA-templated transcription, initiation
CBP34_RS12515	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CBP34_RS12525	COG0347	Belongs to the P(II) protein family
CBP34_RS12540	COG0835	chemotaxis
CBP34_RS12545	COG0840	transmembrane signaling receptor activity
CBP34_RS12550	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CBP34_RS12585	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CBP34_RS12590	COG0746	molybdenum cofactor guanylyltransferase activity
CBP34_RS12605	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CBP34_RS12630	COG0328	RNA-DNA hybrid ribonuclease activity
CBP34_RS12640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CBP34_RS12645	COG0741	lytic transglycosylase activity
CBP34_RS12645	COG1388	LysM domain
CBP34_RS12665	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CBP34_RS12670	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CBP34_RS12675	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CBP34_RS12690	COG2989	Protein conserved in bacteria
CBP34_RS12695	COG3108	Peptidase M15
CBP34_RS12705	COG1074	ATP-dependent DNA helicase activity
CBP34_RS12720	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CBP34_RS12725	COG0254	rRNA binding
CBP34_RS12750	COG0704	Plays a role in the regulation of phosphate uptake
CBP34_RS12755	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CBP34_RS12760	COG0581	inorganic phosphate transmembrane transporter activity
CBP34_RS12765	COG0573	inorganic phosphate transmembrane transporter activity
CBP34_RS12770	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CBP34_RS12775	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CBP34_RS12820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CBP34_RS12830	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CBP34_RS12840	COG1534	Rna-binding protein
CBP34_RS12860	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CBP34_RS12865	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CBP34_RS12870	COG0505	Belongs to the CarA family
CBP34_RS12875	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CBP34_RS12880	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CBP34_RS12885	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CBP34_RS12890	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CBP34_RS12895	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CBP34_RS12900	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CBP34_RS12915	COG0750	zinc metalloprotease
CBP34_RS12920	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CBP34_RS12930	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CBP34_RS12935	COG0233	cytoplasmic translational termination
CBP34_RS12950	COG0052	Belongs to the universal ribosomal protein uS2 family
CBP34_RS13005	COG0741	lytic transglycosylase activity
CBP34_RS13015	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CBP34_RS13025	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CBP34_RS13030	COG0517	IMP dehydrogenase activity
CBP34_RS13045	COG0277	FAD linked oxidase domain protein
CBP34_RS13050	COG1295	ribonuclease BN
CBP34_RS13065	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CBP34_RS13070	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CBP34_RS13075	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CBP34_RS13085	COG0582	viral genome integration into host DNA
CBP34_RS13100	COG2948	multi-organism process
CBP34_RS13115	COG4959	Type IV secretory pathway protease TraF
CBP34_RS13135	COG2003	Belongs to the UPF0758 family
CBP34_RS13155	COG3328	transposase activity
CBP34_RS13190	COG2226	methyltransferase
CBP34_RS13235	COG0708	Exodeoxyribonuclease III
CBP34_RS13245	COG2204	response regulator
CBP34_RS13250	COG3852	Histidine kinase
CBP34_RS13260	COG0174	glutamine synthetase
CBP34_RS13325	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CBP34_RS13330	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CBP34_RS13335	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CBP34_RS13340	COG0330	HflC and HflK could
CBP34_RS13345	COG0330	HflC and HflK could
CBP34_RS13350	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CBP34_RS13355	COG1923	regulation of RNA biosynthetic process
CBP34_RS13360	COG1160	GTP binding
CBP34_RS13365	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CBP34_RS13375	COG0124	histidyl-tRNA synthetase
CBP34_RS13380	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CBP34_RS13395	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CBP34_RS13400	COG0105	UTP biosynthetic process
CBP34_RS13405	COG1187	pseudouridine synthase activity
CBP34_RS13410	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CBP34_RS13425	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CBP34_RS13430	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CBP34_RS13435	COG3321	synthase
CBP34_RS13435	COG0604	alcohol dehydrogenase
CBP34_RS13435	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS13445	COG3540	Alkaline phosphatase
CBP34_RS13450	COG0405	Gamma-glutamyltransferase
CBP34_RS13455	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CBP34_RS13460	COG0156	8-amino-7-oxononanoate synthase activity
CBP34_RS13490	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBP34_RS13495	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBP34_RS13500	COG0583	DNA-binding transcription factor activity
CBP34_RS13525	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CBP34_RS13540	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CBP34_RS13550	COG3634	alkyl hydroperoxide reductase activity
CBP34_RS13570	COG4628	conserved protein (DUF2132)
CBP34_RS13585	COG2308	Evidence 4 Homologs of previously reported genes of
CBP34_RS13600	COG0840	transmembrane signaling receptor activity
CBP34_RS13610	COG0741	lytic transglycosylase activity
CBP34_RS13625	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS13635	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CBP34_RS13640	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CBP34_RS13645	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CBP34_RS13660	COG2850	peptidyl-arginine hydroxylation
CBP34_RS13665	COG1047	Peptidyl-prolyl cis-trans
CBP34_RS13675	COG0756	dUTP diphosphatase activity
CBP34_RS13685	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CBP34_RS13690	COG0504	CTP synthase activity
CBP34_RS13695	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CBP34_RS13700	COG0148	phosphopyruvate hydratase activity
CBP34_RS13705	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CBP34_RS13710	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CBP34_RS13720	COG2833	Protein of unknown function (DUF455)
CBP34_RS13725	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CBP34_RS13730	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CBP34_RS13735	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS13740	COG4974	Belongs to the 'phage' integrase family
CBP34_RS13745	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS13760	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CBP34_RS13765	COG0802	atpase or kinase
CBP34_RS13785	COG0586	Pfam SNARE associated Golgi protein
CBP34_RS13790	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CBP34_RS13800	COG0584	glycerophosphoryl diester phosphodiesterase
CBP34_RS13805	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CBP34_RS13815	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CBP34_RS13820	COG2814	Major facilitator Superfamily
CBP34_RS13825	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CBP34_RS13830	COG4181	ATPase activity
CBP34_RS13835	COG0071	Belongs to the small heat shock protein (HSP20) family
CBP34_RS13855	COG0559	Belongs to the binding-protein-dependent transport system permease family
CBP34_RS13880	COG1132	(ABC) transporter
CBP34_RS13895	COG1007	ATP synthesis coupled electron transport
CBP34_RS13910	COG0713	ATP synthesis coupled electron transport
CBP34_RS13920	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CBP34_RS13925	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CBP34_RS13930	COG1034	ATP synthesis coupled electron transport
CBP34_RS13945	COG0649	NAD binding
CBP34_RS13950	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CBP34_RS13955	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CBP34_RS13960	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CBP34_RS13975	COG0149	triose-phosphate isomerase activity
CBP34_RS13980	COG0604	alcohol dehydrogenase
CBP34_RS13980	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS13980	COG3321	synthase
CBP34_RS13985	COG1185	polyribonucleotide nucleotidyltransferase activity
CBP34_RS13990	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CBP34_RS13995	COG0436	Aminotransferase
CBP34_RS14035	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CBP34_RS14035	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CBP34_RS14040	COG0709	Synthesizes selenophosphate from selenide and ATP
CBP34_RS14045	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CBP34_RS14050	COG0004	ammonium transporteR
CBP34_RS14085	COG2197	response regulator
CBP34_RS14105	COG0542	response to heat
CBP34_RS14110	COG0314	molybdopterin synthase activity
CBP34_RS14140	COG0303	'Molybdopterin
CBP34_RS14145	COG1763	Mo-molybdopterin cofactor biosynthetic process
CBP34_RS14150	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CBP34_RS14160	COG0436	Aminotransferase
CBP34_RS14170	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CBP34_RS14175	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CBP34_RS14185	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS14195	COG0359	binds to the 23S rRNA
CBP34_RS14200	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CBP34_RS14210	COG0360	Binds together with S18 to 16S ribosomal RNA
CBP34_RS14215	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CBP34_RS14220	COG0443	Heat shock 70 kDa protein
CBP34_RS14225	COG0484	heat shock protein binding
CBP34_RS14230	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CBP34_RS14250	COG0066	3-isopropylmalate dehydratase activity
CBP34_RS14255	COG0473	3-isopropylmalate dehydrogenase activity
CBP34_RS14265	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CBP34_RS14275	COG0101	tRNA pseudouridine synthase activity
CBP34_RS14280	COG0135	phosphoribosylanthranilate isomerase activity
CBP34_RS14285	COG0133	tryptophan synthase activity
CBP34_RS14290	COG0159	tryptophan synthase activity
CBP34_RS14295	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CBP34_RS14300	COG0762	integral membrane protein
CBP34_RS14325	COG0438	transferase activity, transferring glycosyl groups
CBP34_RS14340	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CBP34_RS14345	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CBP34_RS14350	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CBP34_RS14365	COG1472	Belongs to the glycosyl hydrolase 3 family
CBP34_RS14370	COG0736	holo-[acyl-carrier-protein] synthase activity
CBP34_RS14375	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CBP34_RS14380	COG1381	Involved in DNA repair and RecF pathway recombination
CBP34_RS14385	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CBP34_RS14390	COG0571	ribonuclease III activity
CBP34_RS14400	COG0681	Belongs to the peptidase S26 family
CBP34_RS14405	COG0481	GTPase activity
CBP34_RS14410	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CBP34_RS14420	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
CBP34_RS14430	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CBP34_RS14435	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CBP34_RS14440	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS14455	COG0416	fatty acid biosynthetic process
CBP34_RS14460	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CBP34_RS14465	COG1399	metal-binding, possibly nucleic acid-binding protein
CBP34_RS14470	COG0424	maF-like protein
CBP34_RS14475	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CBP34_RS14505	COG3022	response to hydroperoxide
CBP34_RS14515	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS14520	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CBP34_RS14520	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CBP34_RS14525	COG0840	transmembrane signaling receptor activity
CBP34_RS14535	COG0028	Belongs to the TPP enzyme family
CBP34_RS14540	COG1304	FMN binding
CBP34_RS14545	COG5002	protein histidine kinase activity
CBP34_RS14545	COG5001	Diguanylate cyclase
CBP34_RS14545	COG3447	MASE1 domain protein
CBP34_RS14550	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CBP34_RS14560	COG0753	catalase activity
CBP34_RS14570	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS14580	COG3275	phosphorelay sensor kinase activity
CBP34_RS14595	COG0412	Dienelactone hydrolase
CBP34_RS14605	COG0655	NAD(P)H dehydrogenase (quinone) activity
CBP34_RS14615	COG0625	glutathione transferase activity
CBP34_RS14620	COG2226	methyltransferase
CBP34_RS14650	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CBP34_RS14670	COG0210	DNA helicase
CBP34_RS14680	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS14685	COG0516	GMP reductase activity
CBP34_RS14690	COG2084	Dehydrogenase
CBP34_RS14750	COG0582	viral genome integration into host DNA
CBP34_RS14755	COG2814	Major facilitator Superfamily
CBP34_RS14765	COG0513	Belongs to the DEAD box helicase family
CBP34_RS14770	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CBP34_RS14775	COG0501	Belongs to the peptidase M48B family
CBP34_RS14780	COG2154	pterin-4-alpha-carbinolamine dehydratase
CBP34_RS14790	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CBP34_RS14795	COG0494	nUDIX hydrolase
CBP34_RS14800	COG0335	large ribosomal subunit rRNA binding
CBP34_RS14805	COG0336	Belongs to the RNA methyltransferase TrmD family
CBP34_RS14810	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CBP34_RS14815	COG0228	four-way junction DNA binding
CBP34_RS14830	COG0306	phosphate transporter
CBP34_RS14835	COG1392	Phosphate transport regulator
CBP34_RS14860	COG0559	Belongs to the binding-protein-dependent transport system permease family
CBP34_RS14865	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CBP34_RS14870	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CBP34_RS14875	COG1674	ftsk spoiiie
CBP34_RS14880	COG0492	ferredoxin-NADP+ reductase activity
CBP34_RS14885	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CBP34_RS14890	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CBP34_RS14900	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CBP34_RS14900	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CBP34_RS14910	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS14915	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CBP34_RS14920	COG3132	Protein of unknown function, DUF480
CBP34_RS14925	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS14930	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS14935	COG3781	membrane
CBP34_RS14945	COG0196	riboflavin kinase activity
CBP34_RS14955	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CBP34_RS14960	COG1136	(ABC) transporter
CBP34_RS14965	COG4591	ABC-type transport system involved in lipoprotein release permease component
CBP34_RS14995	COG0009	L-threonylcarbamoyladenylate synthase
CBP34_RS15000	COG1994	Peptidase M50
CBP34_RS15005	COG0180	Tryptophanyl-tRNA synthetase
CBP34_RS15025	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CBP34_RS15025	COG0574	Belongs to the PEP-utilizing enzyme family
CBP34_RS15030	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CBP34_RS15065	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CBP34_RS15070	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CBP34_RS15075	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CBP34_RS15075	COG0517	IMP dehydrogenase activity
CBP34_RS15075	COG0617	tRNA 3'-terminal CCA addition
CBP34_RS15080	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS15085	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CBP34_RS15090	COG1047	Peptidyl-prolyl cis-trans
CBP34_RS15095	COG2003	Belongs to the UPF0758 family
CBP34_RS15100	COG1193	negative regulation of DNA recombination
CBP34_RS15105	COG0737	Belongs to the 5'-nucleotidase family
CBP34_RS15130	COG0798	PFAM Bile acid sodium symporter
CBP34_RS15160	COG3846	protein secretion by the type IV secretion system
CBP34_RS15175	COG3451	type IV secretory pathway VirB4
CBP34_RS15185	COG3838	Conjugal transfer protein Trbc
CBP34_RS15190	COG4962	Type ii secretion system protein e
CBP34_RS15210	COG0583	DNA-binding transcription factor activity
CBP34_RS15255	COG4959	Type IV secretory pathway protease TraF
CBP34_RS15270	COG1192	Involved in chromosome partitioning
CBP34_RS15325	COG1475	DNA binding
CBP34_RS15340	COG3077	Addiction module antitoxin, RelB DinJ family
CBP34_RS15390	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CBP34_RS15425	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CBP34_RS15430	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CBP34_RS15450	COG1561	YicC-like family, N-terminal region
CBP34_RS15455	COG0194	GDP metabolic process
CBP34_RS15460	COG1758	RNA polymerase activity
CBP34_RS15465	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CBP34_RS15500	COG0582	viral genome integration into host DNA
CBP34_RS15530	COG1420	regulation of RNA biosynthetic process
CBP34_RS15535	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CBP34_RS15540	COG0497	DNA recombination
CBP34_RS15545	COG1660	Displays ATPase and GTPase activities
CBP34_RS15570	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CBP34_RS15575	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CBP34_RS15585	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CBP34_RS15590	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CBP34_RS15595	COG0193	aminoacyl-tRNA hydrolase activity
CBP34_RS15600	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CBP34_RS15610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CBP34_RS15615	COG0444	Belongs to the ABC transporter superfamily
CBP34_RS15620	COG4608	Belongs to the ABC transporter superfamily
CBP34_RS15640	COG0588	phosphoglycerate mutase activity
CBP34_RS15665	COG0302	gtp cyclohydrolase
CBP34_RS15670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CBP34_RS15685	COG1715	Restriction endonuclease
CBP34_RS15710	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CBP34_RS15725	COG2226	methyltransferase
CBP34_RS15745	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CBP34_RS15755	COG1175	transmembrane transport
CBP34_RS15760	COG0395	ABC-type sugar transport system, permease component
CBP34_RS15765	COG3842	ATPase activity
CBP34_RS15770	COG0584	glycerophosphoryl diester phosphodiesterase
CBP34_RS15785	COG0583	DNA-binding transcription factor activity
CBP34_RS15795	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CBP34_RS15805	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CBP34_RS15810	COG2890	protein-(glutamine-N5) methyltransferase activity
CBP34_RS15815	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CBP34_RS15820	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CBP34_RS15825	COG1253	flavin adenine dinucleotide binding
CBP34_RS15830	COG0741	lytic transglycosylase activity
CBP34_RS15835	COG0442	prolyl-tRNA aminoacylation
CBP34_RS15840	COG0494	nUDIX hydrolase
CBP34_RS15845	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CBP34_RS15850	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CBP34_RS15855	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CBP34_RS15860	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CBP34_RS15865	COG0142	geranyltranstransferase activity
CBP34_RS15885	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CBP34_RS15890	COG0237	dephospho-CoA kinase activity
CBP34_RS15895	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CBP34_RS15900	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CBP34_RS15905	COG0494	nUDIX hydrolase
CBP34_RS15915	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CBP34_RS15920	COG0653	protein targeting
CBP34_RS15935	COG2969	positive regulation of protein catabolic process
CBP34_RS15940	COG0625	glutathione transferase activity
CBP34_RS15945	COG2857	Cytochrome c1
CBP34_RS15950	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CBP34_RS15955	COG0723	plastoquinol--plastocyanin reductase activity
CBP34_RS15960	COG1970	mechanosensitive ion channel activity
CBP34_RS15965	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CBP34_RS15970	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CBP34_RS15985	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CBP34_RS15990	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CBP34_RS15995	COG0805	protein transport
CBP34_RS16000	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CBP34_RS16005	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CBP34_RS16010	COG0537	adenosine 5'-monophosphoramidase activity
CBP34_RS16025	COG0140	phosphoribosyl-ATP diphosphatase activity
CBP34_RS16030	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CBP34_RS16035	COG0107	imidazoleglycerol-phosphate synthase activity
CBP34_RS16040	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CBP34_RS16075	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CBP34_RS16085	COG0131	Imidazoleglycerol-phosphate dehydratase
CBP34_RS16090	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CBP34_RS16100	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CBP34_RS16105	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CBP34_RS16110	COG5007	Belongs to the BolA IbaG family
CBP34_RS16115	COG0842	Transport permease protein
CBP34_RS16120	COG1131	(ABC) transporter
CBP34_RS16140	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CBP34_RS16145	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CBP34_RS16150	COG1127	ABC transporter
CBP34_RS16155	COG1126	abc transporter atp-binding protein
CBP34_RS16160	COG0765	amino acid transport
CBP34_RS16175	COG0070	glutamate synthase
CBP34_RS16175	COG0067	glutamate synthase
CBP34_RS16175	COG0069	glutamate synthase activity
CBP34_RS16195	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CBP34_RS16200	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CBP34_RS16205	COG3328	transposase activity
CBP34_RS16245	COG1965	Belongs to the frataxin family
CBP34_RS16260	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CBP34_RS16265	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CBP34_RS16270	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CBP34_RS16275	COG1333	cytochrome c biogenesis protein
CBP34_RS16285	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CBP34_RS16295	COG1560	Kdo2-lipid A biosynthetic process
CBP34_RS16305	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CBP34_RS16310	COG1051	belongs to the nudix hydrolase family
CBP34_RS16310	COG1056	cytidyltransferase-related domain
CBP34_RS16335	COG3360	Dodecin
CBP34_RS16360	COG3706	GGDEF domain
CBP34_RS16365	COG0784	Response regulator, receiver
CBP34_RS16365	COG2205	protein histidine kinase activity
CBP34_RS16365	COG2198	Histidine kinase
CBP34_RS16370	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CBP34_RS16395	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CBP34_RS16405	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CBP34_RS16410	COG0316	Belongs to the HesB IscA family
CBP34_RS16415	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CBP34_RS16420	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CBP34_RS16430	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CBP34_RS16435	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CBP34_RS16440	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CBP34_RS16450	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CBP34_RS16455	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CBP34_RS16485	COG1845	cytochrome c oxidase, subunit III
CBP34_RS16490	COG2010	Cytochrome c
CBP34_RS16500	COG0714	Associated with various cellular activities
CBP34_RS16520	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CBP34_RS16525	COG0683	leucine binding
CBP34_RS16540	COG0477	Major facilitator Superfamily
CBP34_RS16545	COG3162	membrane
CBP34_RS16585	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CBP34_RS16600	COG1024	Enoyl-CoA hydratase
CBP34_RS16605	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CBP34_RS16610	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS16630	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CBP34_RS16635	COG3012	SEC-C Motif Domain Protein
CBP34_RS16645	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS16650	COG3328	transposase activity
CBP34_RS16655	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS16660	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS16670	COG0183	Belongs to the thiolase family
CBP34_RS16675	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CBP34_RS16680	COG0288	reversible hydration of carbon dioxide
CBP34_RS16685	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS16695	COG0789	Transcriptional regulator
CBP34_RS16725	COG0488	(ABC) transporter
CBP34_RS16730	COG2201	protein-glutamate methylesterase activity
CBP34_RS16735	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CBP34_RS16745	COG0835	chemotaxis
CBP34_RS16755	COG2201	protein-glutamate methylesterase activity
CBP34_RS16770	COG2197	response regulator
CBP34_RS16780	COG1987	bacterial-type flagellum assembly
CBP34_RS16785	COG1338	Plays a role in the flagellum-specific transport system
CBP34_RS16795	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CBP34_RS16805	COG1580	Controls the rotational direction of flagella during chemotaxis
CBP34_RS16840	COG1677	Flagellar hook-basal body complex protein FliE
CBP34_RS16850	COG3609	addiction module antidote protein, CC2985 family
CBP34_RS16865	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CBP34_RS16880	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CBP34_RS16885	COG1360	Flagellar Motor Protein
CBP34_RS16890	COG0745	RESPONSE REGULATOR receiver
CBP34_RS16905	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CBP34_RS16935	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
CBP34_RS16940	COG1815	bacterial-type flagellum-dependent cell motility
CBP34_RS16945	COG1558	bacterial-type flagellum-dependent cell motility
CBP34_RS16950	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CBP34_RS16955	COG1749	Flagellar hook protein flgE
CBP34_RS16960	COG4787	bacterial-type flagellum-dependent cell motility
CBP34_RS16970	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CBP34_RS16975	COG1706	bacterial-type flagellum-dependent cell motility
CBP34_RS16985	COG1256	bacterial-type flagellum assembly
CBP34_RS16990	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CBP34_RS17000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBP34_RS17010	COG0697	spore germination
CBP34_RS17015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBP34_RS17020	COG0625	glutathione transferase activity
CBP34_RS17025	COG0384	phenazine biosynthesis protein PhzF
CBP34_RS17030	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CBP34_RS17065	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS17075	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS17080	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS17130	COG0697	spore germination
CBP34_RS17135	COG2423	ornithine cyclodeaminase activity
CBP34_RS17170	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CBP34_RS17185	COG0084	hydrolase, TatD family'
CBP34_RS17190	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CBP34_RS17195	COG0714	Associated with various cellular activities
CBP34_RS17240	COG1832	CoA-binding protein
CBP34_RS17255	COG0861	Integral membrane protein TerC family
CBP34_RS17260	COG0583	DNA-binding transcription factor activity
CBP34_RS17270	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CBP34_RS17290	COG0438	transferase activity, transferring glycosyl groups
CBP34_RS17295	COG0679	Auxin Efflux Carrier
CBP34_RS17300	COG0210	DNA helicase
CBP34_RS17325	COG0343	queuine tRNA-ribosyltransferase activity
CBP34_RS17355	COG0204	Acyl-transferase
CBP34_RS17355	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS17380	COG3181	Tripartite tricarboxylate transporter family receptor
CBP34_RS17385	COG2072	flavoprotein involved in K transport
CBP34_RS17395	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CBP34_RS17410	COG2847	Copper chaperone PCu(A)C
CBP34_RS17430	COG0625	glutathione transferase activity
CBP34_RS17450	COG2095	MarC family integral membrane protein
CBP34_RS17460	COG0583	DNA-binding transcription factor activity
CBP34_RS17465	COG1960	acyl-CoA dehydrogenase activity
CBP34_RS17495	COG0203	ribosomal protein L17
CBP34_RS17500	COG0202	RNA polymerase activity
CBP34_RS17505	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CBP34_RS17510	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CBP34_RS17515	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CBP34_RS17520	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CBP34_RS17525	COG0201	protein transport
CBP34_RS17530	COG0200	Binds to the 23S rRNA
CBP34_RS17535	COG1841	ribosomal large subunit assembly
CBP34_RS17540	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CBP34_RS17545	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CBP34_RS17550	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CBP34_RS17555	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CBP34_RS17560	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CBP34_RS17565	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CBP34_RS17570	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CBP34_RS17575	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CBP34_RS17595	COG0395	ABC-type sugar transport system, permease component
CBP34_RS17605	COG3842	ATPase activity
CBP34_RS17610	COG3842	ATPase activity
CBP34_RS17630	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CBP34_RS17640	COG0783	Belongs to the Dps family
CBP34_RS17650	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CBP34_RS17675	COG0134	indole-3-glycerol-phosphate synthase activity
CBP34_RS17685	COG1280	lysine exporter protein (LysE YggA)
CBP34_RS17690	COG0512	Glutamine amidotransferase of anthranilate synthase
CBP34_RS17710	COG0546	phosphoglycolate phosphatase activity
CBP34_RS17745	COG2204	response regulator
CBP34_RS17750	COG2198	Histidine kinase
CBP34_RS17750	COG0643	Histidine kinase
CBP34_RS17755	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CBP34_RS17770	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS17815	COG2076	Multidrug Resistance protein
CBP34_RS17820	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CBP34_RS17820	COG0546	phosphoglycolate phosphatase activity
CBP34_RS17855	COG1216	Glycosyl transferase, family 2
CBP34_RS17855	COG0463	Glycosyl transferase, family 2
CBP34_RS17885	COG0438	transferase activity, transferring glycosyl groups
CBP34_RS17900	COG0367	asparagine synthase
CBP34_RS17925	COG3267	Type II secretory pathway component ExeA
CBP34_RS17925	COG3409	Peptidoglycan-binding domain 1 protein
CBP34_RS17935	COG0489	protein tyrosine kinase activity
CBP34_RS17960	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CBP34_RS17965	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CBP34_RS17970	COG2967	ApaG domain
CBP34_RS17985	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CBP34_RS18005	COG3243	poly(R)-hydroxyalkanoic acid synthase
CBP34_RS18015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBP34_RS18020	COG1129	ABC transporter
CBP34_RS18020	COG0842	Transport permease protein
CBP34_RS18025	COG0842	Transport permease protein
CBP34_RS18035	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CBP34_RS18040	COG0589	response to stress
CBP34_RS18045	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CBP34_RS18055	COG0659	secondary active sulfate transmembrane transporter activity
CBP34_RS18060	COG0653	protein targeting
CBP34_RS18080	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CBP34_RS18100	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CBP34_RS18105	COG0018	arginyl-trna synthetase
CBP34_RS18130	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CBP34_RS18140	COG1942	4-Oxalocrotonate Tautomerase
CBP34_RS18145	COG2814	Major facilitator Superfamily
CBP34_RS18150	COG0121	glutamine amidotransferase
CBP34_RS18180	COG0189	ligase activity
CBP34_RS18185	COG3135	benzoate transporter
CBP34_RS18190	COG3158	transport of potassium into the cell
CBP34_RS18200	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CBP34_RS18210	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CBP34_RS18215	COG3360	Dodecin
CBP34_RS18245	COG1063	alcohol dehydrogenase
CBP34_RS18255	COG1414	Transcriptional regulator
CBP34_RS18260	COG0010	Belongs to the arginase family
CBP34_RS18270	COG0495	leucyl-tRNA aminoacylation
CBP34_RS18285	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CBP34_RS18290	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CBP34_RS18295	COG0735	belongs to the Fur family
CBP34_RS18300	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CBP34_RS18310	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CBP34_RS18320	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CBP34_RS18335	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CBP34_RS18340	COG0009	L-threonylcarbamoyladenylate synthase
CBP34_RS18355	COG4095	Psort location CytoplasmicMembrane, score
CBP34_RS18360	COG2027	D-alanyl-D-alanine carboxypeptidase
CBP34_RS18380	COG0598	Magnesium transport protein CorA
CBP34_RS18385	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CBP34_RS18390	COG0318	PFAM AMP-dependent synthetase and ligase
CBP34_RS18395	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CBP34_RS18400	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CBP34_RS18430	COG0006	proline dipeptidase activity
CBP34_RS18440	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CBP34_RS18445	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CBP34_RS18450	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CBP34_RS18455	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CBP34_RS18465	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CBP34_RS18500	COG3148	PFAM DTW domain containing protein
CBP34_RS18515	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBP34_RS18525	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS18530	COG2365	Tyrosine phosphatase family
CBP34_RS18535	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CBP34_RS18535	COG0551	DNA topoisomerase type I activity
CBP34_RS18555	COG0642	Histidine kinase
CBP34_RS18585	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CBP34_RS18590	COG2137	regulation of response to DNA damage stimulus
CBP34_RS18595	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CBP34_RS18600	COG0045	succinate-CoA ligase (ADP-forming) activity
CBP34_RS18605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CBP34_RS18610	COG0861	Integral membrane protein TerC family
CBP34_RS18625	COG1234	tRNA 3'-trailer cleavage
CBP34_RS18650	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CBP34_RS18660	COG3328	transposase activity
CBP34_RS18665	COG0315	cyclic pyranopterin monophosphate synthase activity
CBP34_RS18670	COG4783	chaperone-mediated protein folding
CBP34_RS18675	COG1950	PFAM Membrane protein of
CBP34_RS18685	COG0861	Integral membrane protein TerC family
CBP34_RS18710	COG0625	glutathione transferase activity
CBP34_RS18740	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CBP34_RS18765	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CBP34_RS18785	COG4566	intracellular signal transduction
CBP34_RS18800	COG2814	Major facilitator Superfamily
CBP34_RS18805	COG1522	sequence-specific DNA binding
CBP34_RS18815	COG1862	Preprotein translocase
CBP34_RS18825	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CBP34_RS18845	COG0242	peptide deformylase activity
CBP34_RS18870	COG0126	phosphoglycerate kinase activity
CBP34_RS18875	COG0284	orotidine-5'-phosphate decarboxylase activity
CBP34_RS18880	COG0697	spore germination
CBP34_RS18890	COG0840	transmembrane signaling receptor activity
CBP34_RS18905	COG0629	single-stranded DNA binding
CBP34_RS18910	COG1215	transferase activity, transferring glycosyl groups
CBP34_RS18925	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CBP34_RS18930	COG0482	sulfurtransferase activity
CBP34_RS18935	COG1061	Type III restriction enzyme res subunit
CBP34_RS18945	COG3976	FMN-binding domain protein
CBP34_RS18945	COG1053	succinate dehydrogenase
CBP34_RS18980	COG0737	Belongs to the 5'-nucleotidase family
CBP34_RS18990	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CBP34_RS19005	COG2189	Belongs to the N(4) N(6)-methyltransferase family
CBP34_RS19030	COG4786	Flagellar basal body rod
CBP34_RS19045	COG4566	intracellular signal transduction
CBP34_RS19060	COG0281	malic enzyme
CBP34_RS19060	COG0280	phosphate acetyltransferase
CBP34_RS19075	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CBP34_RS19080	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CBP34_RS19085	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CBP34_RS19100	COG2329	Antibiotic biosynthesis monooxygenase
CBP34_RS19120	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CBP34_RS19135	COG3154	lipid carrier protein
CBP34_RS19140	COG0826	peptidase U32
CBP34_RS19145	COG0826	peptidase U32
CBP34_RS19150	COG2814	Major facilitator Superfamily
CBP34_RS19155	COG2175	clavaminate synthase activity
CBP34_RS19165	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CBP34_RS19170	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBP34_RS19175	COG2267	carboxylic ester hydrolase activity
CBP34_RS19185	COG0840	transmembrane signaling receptor activity
CBP34_RS19190	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CBP34_RS19190	COG2813	Specifically methylates the guanine in position
CBP34_RS19195	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CBP34_RS19200	COG2119	membrane
CBP34_RS19205	COG0724	RNA recognition motif
CBP34_RS19210	COG0724	RNA recognition motif
CBP34_RS19215	COG1028	Short-chain dehydrogenase reductase Sdr
CBP34_RS19225	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CBP34_RS19240	COG2826	transposase and inactivated derivatives, IS30 family
CBP34_RS19250	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CBP34_RS19265	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CBP34_RS19275	COG0706	membrane insertase activity
CBP34_RS19280	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CBP34_RS19285	COG0594	ribonuclease P activity
CBP34_RS19290	COG0230	Belongs to the bacterial ribosomal protein bL34 family