locus-tag class description FIM01_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FIM01_RS00005 PF11638 DnaA N-terminal domain FIM01_RS00005 PF00308 Bacterial dnaA protein FIM01_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FIM01_RS00010 PF02767 DNA polymerase III beta subunit, central domain FIM01_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FIM01_RS00015 PF02463 RecF/RecN/SMC N terminal domain FIM01_RS00020 PF01751 Toprim domain FIM01_RS00020 PF00204 DNA gyrase B FIM01_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS00020 PF18053 DNA gyrase B subunit insert domain FIM01_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus FIM01_RS00030 PF09335 SNARE associated Golgi protein FIM01_RS00035 PF00005 ABC transporter FIM01_RS00035 PF12848 ABC transporter FIM01_RS00055 PF01521 Iron-sulphur cluster biosynthesis FIM01_RS00060 PF00561 alpha/beta hydrolase fold FIM01_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase FIM01_RS00070 PF00579 tRNA synthetases class I (W and Y) FIM01_RS00115 PF00209 Sodium:neurotransmitter symporter family FIM01_RS00125 PF01189 16S rRNA methyltransferase RsmB/F FIM01_RS00125 PF01029 NusB family FIM01_RS00130 PF00551 Formyl transferase FIM01_RS00130 PF02911 Formyl transferase, C-terminal domain FIM01_RS00135 PF00920 Dehydratase family FIM01_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS00150 PF03466 LysR substrate binding domain FIM01_RS00155 PF00860 Permease family FIM01_RS00160 PF00311 Phosphoenolpyruvate carboxylase FIM01_RS00165 PF08361 MAATS-type transcriptional repressor, C-terminal region FIM01_RS00165 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIM01_RS00175 PF00873 AcrB/AcrD/AcrF family FIM01_RS00185 PF01556 DnaJ C terminal domain FIM01_RS00185 PF00226 DnaJ domain FIM01_RS00185 PF00684 DnaJ central domain FIM01_RS00195 PF05173 Dihydrodipicolinate reductase, C-terminus FIM01_RS00195 PF01113 Dihydrodipicolinate reductase, N-terminus FIM01_RS00205 PF07690 Major Facilitator Superfamily FIM01_RS00210 PF00248 Aldo/keto reductase family FIM01_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS00215 PF03466 LysR substrate binding domain FIM01_RS00230 PF00155 Aminotransferase class I and II FIM01_RS00230 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS00235 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS00235 PF00107 Zinc-binding dehydrogenase FIM01_RS00240 PF03352 Methyladenine glycosylase FIM01_RS00255 PF10576 Iron-sulfur binding domain of endonuclease III FIM01_RS00255 PF14815 NUDIX domain FIM01_RS00255 PF00730 HhH-GPD superfamily base excision DNA repair protein FIM01_RS00255 PF00633 Helix-hairpin-helix motif FIM01_RS00270 PF07043 Protein of unknown function (DUF1328) FIM01_RS00275 PF03692 Putative zinc- or iron-chelating domain FIM01_RS00280 PF07995 Glucose / Sorbosone dehydrogenase FIM01_RS00285 PF12002 MgsA AAA+ ATPase C terminal FIM01_RS00285 PF16193 AAA C-terminal domain FIM01_RS00285 PF00004 ATPase family associated with various cellular activities (AAA) FIM01_RS00290 PF01226 Formate/nitrite transporter FIM01_RS00300 PF01259 SAICAR synthetase FIM01_RS00310 PF00701 Dihydrodipicolinate synthetase family FIM01_RS00315 PF00857 Isochorismatase family FIM01_RS00320 PF01758 Sodium Bile acid symporter family FIM01_RS00325 PF01554 MatE FIM01_RS00330 PF04463 Protein of unknown function (DUF523) FIM01_RS00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIM01_RS00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIM01_RS00350 PF02798 Glutathione S-transferase, N-terminal domain FIM01_RS00350 PF14497 Glutathione S-transferase, C-terminal domain FIM01_RS00360 PF00324 Amino acid permease FIM01_RS00370 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIM01_RS00370 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIM01_RS00380 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS00380 PF07702 UTRA domain FIM01_RS00385 PF05962 HutD FIM01_RS00390 PF17391 Urocanase N-terminal domain FIM01_RS00390 PF17392 Urocanase C-terminal domain FIM01_RS00390 PF01175 Urocanase Rossmann-like domain FIM01_RS00395 PF00221 Aromatic amino acid lyase FIM01_RS00400 PF00324 Amino acid permease FIM01_RS00405 PF01979 Amidohydrolase family FIM01_RS00410 PF00491 Arginase family FIM01_RS00425 PF01177 Asp/Glu/Hydantoin racemase FIM01_RS00440 PF00145 C-5 cytosine-specific DNA methylase FIM01_RS00445 PF08676 MutL C terminal dimerisation domain FIM01_RS00445 PF01119 DNA mismatch repair protein, C-terminal domain FIM01_RS00460 PF00664 ABC transporter transmembrane region FIM01_RS00460 PF03412 Peptidase C39 family FIM01_RS00460 PF00005 ABC transporter FIM01_RS00495 PF00665 Integrase core domain FIM01_RS00495 PF08281 Sigma-70, region 4 FIM01_RS00500 PF01695 IstB-like ATP binding protein FIM01_RS00520 PF13361 UvrD-like helicase C-terminal domain FIM01_RS00520 PF00580 UvrD/REP helicase N-terminal domain FIM01_RS00530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FIM01_RS00530 PF00271 Helicase conserved C-terminal domain FIM01_RS00530 PF08463 EcoEI R protein C-terminal FIM01_RS00530 PF04851 Type III restriction enzyme, res subunit FIM01_RS00540 PF02384 N-6 DNA Methylase FIM01_RS00540 PF12161 HsdM N-terminal domain FIM01_RS00550 PF01381 Helix-turn-helix FIM01_RS00565 PF00665 Integrase core domain FIM01_RS00575 PF01695 IstB-like ATP binding protein FIM01_RS00620 PF15978 Tn7-like transposition protein D FIM01_RS00620 PF06527 TniQ FIM01_RS00625 PF11426 Tn7 transposition regulator TnsC FIM01_RS00625 PF13401 AAA domain FIM01_RS00630 PF00665 Integrase core domain FIM01_RS00635 PF08721 TnsA endonuclease C terminal FIM01_RS00635 PF08722 TnsA endonuclease N terminal FIM01_RS00640 PF01380 SIS domain FIM01_RS00645 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS00645 PF14602 Hexapeptide repeat of succinyl-transferase FIM01_RS00645 PF12804 MobA-like NTP transferase domain FIM01_RS00650 PF04608 Phosphatidylglycerophosphatase A FIM01_RS00655 PF00586 AIR synthase related protein, N-terminal domain FIM01_RS00655 PF02769 AIR synthase related protein, C-terminal domain FIM01_RS00660 PF01029 NusB family FIM01_RS00665 PF00885 6,7-dimethyl-8-ribityllumazine synthase FIM01_RS00670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FIM01_RS00670 PF00925 GTP cyclohydrolase II FIM01_RS00700 PF02580 D-Tyr-tRNA(Tyr) deacylase FIM01_RS00705 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FIM01_RS00705 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FIM01_RS00710 PF00581 Rhodanese-like domain FIM01_RS00715 PF02666 Phosphatidylserine decarboxylase FIM01_RS00725 PF11808 Phosphate regulon sensor protein PhoR FIM01_RS00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS00725 PF00989 PAS fold FIM01_RS00725 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS00730 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS00730 PF00072 Response regulator receiver domain FIM01_RS00740 PF00106 short chain dehydrogenase FIM01_RS00745 PF01554 MatE FIM01_RS00750 PF00155 Aminotransferase class I and II FIM01_RS00755 PF04286 Protein of unknown function (DUF445) FIM01_RS00770 PF04262 Glutamate-cysteine ligase FIM01_RS00775 PF02600 Disulfide bond formation protein DsbB FIM01_RS00780 PF13296 Putative type VI secretion system Rhs element Vgr FIM01_RS00780 PF04717 Type VI secretion system, phage-baseplate injector FIM01_RS00780 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FIM01_RS00785 PF01510 N-acetylmuramoyl-L-alanine amidase FIM01_RS00785 PF01476 LysM domain FIM01_RS00785 PF01471 Putative peptidoglycan binding domain FIM01_RS00815 PF05728 Uncharacterised protein family (UPF0227) FIM01_RS00820 PF00986 DNA gyrase B subunit, carboxyl terminus FIM01_RS00820 PF01751 Toprim domain FIM01_RS00820 PF00204 DNA gyrase B FIM01_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS00825 PF04115 Ureidoglycolate lyase FIM01_RS00830 PF03561 Allantoicase repeat FIM01_RS00835 PF01494 FAD binding domain FIM01_RS00845 PF00860 Permease family FIM01_RS00850 PF00576 HIUase/Transthyretin family FIM01_RS00880 PF02683 Cytochrome C biogenesis protein transmembrane region FIM01_RS00880 PF11412 Disulphide bond corrector protein DsbC FIM01_RS00885 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS00885 PF07694 5TMR of 5TMR-LYT FIM01_RS00890 PF07859 alpha/beta hydrolase fold FIM01_RS00900 PF03960 ArsC family FIM01_RS00905 PF03372 Endonuclease/Exonuclease/phosphatase family FIM01_RS00910 PF00156 Phosphoribosyl transferase domain FIM01_RS00915 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS00915 PF00593 TonB dependent receptor FIM01_RS00925 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FIM01_RS00925 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FIM01_RS00930 PF03033 Glycosyltransferase family 28 N-terminal domain FIM01_RS00930 PF04101 Glycosyltransferase family 28 C-terminal domain FIM01_RS00935 PF01225 Mur ligase family, catalytic domain FIM01_RS00935 PF08245 Mur ligase middle domain FIM01_RS00935 PF02875 Mur ligase family, glutamate ligase domain FIM01_RS00940 PF01820 D-ala D-ala ligase N-terminus FIM01_RS00940 PF07478 D-ala D-ala ligase C-terminus FIM01_RS00945 PF03799 Cell division protein FtsQ FIM01_RS00945 PF08478 POTRA domain, FtsQ-type FIM01_RS00950 PF02491 SHS2 domain inserted in FTSA FIM01_RS00955 PF12327 FtsZ family, C-terminal domain FIM01_RS00955 PF00091 Tubulin/FtsZ family, GTPase domain FIM01_RS00960 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FIM01_RS00970 PF01551 Peptidase family M23 FIM01_RS00975 PF00456 Transketolase, thiamine diphosphate binding domain FIM01_RS00975 PF17831 Pyruvate dehydrogenase E1 component middle domain FIM01_RS00980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIM01_RS00980 PF00364 Biotin-requiring enzyme FIM01_RS00980 PF02817 e3 binding domain FIM01_RS00990 PF01169 Uncharacterized protein family UPF0016 FIM01_RS00995 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS00995 PF00593 TonB dependent receptor FIM01_RS01000 PF01613 Flavin reductase like domain FIM01_RS01000 PF00258 Flavodoxin FIM01_RS01005 PF03692 Putative zinc- or iron-chelating domain FIM01_RS01010 PF00571 CBS domain FIM01_RS01010 PF00478 IMP dehydrogenase / GMP reductase domain FIM01_RS01015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIM01_RS01015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIM01_RS01015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIM01_RS01015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIM01_RS01020 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FIM01_RS01020 PF01243 Pyridoxamine 5'-phosphate oxidase FIM01_RS01025 PF17768 RecJ OB domain FIM01_RS01025 PF02272 DHHA1 domain FIM01_RS01025 PF01368 DHH family FIM01_RS01045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIM01_RS01050 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FIM01_RS01055 PF04452 RNA methyltransferase FIM01_RS01060 PF00924 Mechanosensitive ion channel FIM01_RS01070 PF16177 Acetyl-coenzyme A synthetase N-terminus FIM01_RS01070 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS01070 PF00501 AMP-binding enzyme FIM01_RS01075 PF00857 Isochorismatase family FIM01_RS01080 PF01037 Lrp/AsnC ligand binding domain FIM01_RS01085 PF00296 Luciferase-like monooxygenase FIM01_RS01090 PF03358 NADPH-dependent FMN reductase FIM01_RS01095 PF00196 Bacterial regulatory proteins, luxR family FIM01_RS01095 PF00072 Response regulator receiver domain FIM01_RS01105 PF00672 HAMP domain FIM01_RS01105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS01105 PF00072 Response regulator receiver domain FIM01_RS01105 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS01105 PF01627 Hpt domain FIM01_RS01110 PF04341 Protein of unknown function, DUF485 FIM01_RS01115 PF00474 Sodium:solute symporter family FIM01_RS01125 PF02028 BCCT, betaine/carnitine/choline family transporter FIM01_RS01135 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS01140 PF17760 UvrA interaction domain FIM01_RS01140 PF17755 UvrA DNA-binding domain FIM01_RS01140 PF00005 ABC transporter FIM01_RS01145 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS01145 PF16925 Tetracyclin repressor-like, C-terminal domain FIM01_RS01150 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS01150 PF00107 Zinc-binding dehydrogenase FIM01_RS01160 PF06942 GlpM protein FIM01_RS01165 PF02581 Thiamine monophosphate synthase FIM01_RS01165 PF08543 Phosphomethylpyrimidine kinase FIM01_RS01165 PF03070 TENA/THI-4/PQQC family FIM01_RS01175 PF07690 Major Facilitator Superfamily FIM01_RS01180 PF00436 Single-strand binding protein family FIM01_RS01190 PF03591 AzlC protein FIM01_RS01200 PF00324 Amino acid permease FIM01_RS01205 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS01205 PF00155 Aminotransferase class I and II FIM01_RS01210 PF00202 Aminotransferase class-III FIM01_RS01215 PF00171 Aldehyde dehydrogenase family FIM01_RS01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS01225 PF00857 Isochorismatase family FIM01_RS01230 PF02678 Pirin FIM01_RS01230 PF05726 Pirin C-terminal cupin domain FIM01_RS01235 PF01593 Flavin containing amine oxidoreductase FIM01_RS01255 PF07690 Major Facilitator Superfamily FIM01_RS01260 PF03466 LysR substrate binding domain FIM01_RS01260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS01280 PF00248 Aldo/keto reductase family FIM01_RS01285 PF02311 AraC-like ligand binding domain FIM01_RS01285 PF12833 Helix-turn-helix domain FIM01_RS01305 PF01638 HxlR-like helix-turn-helix FIM01_RS01320 PF01638 HxlR-like helix-turn-helix FIM01_RS01330 PF02525 Flavodoxin-like fold FIM01_RS01340 PF13302 Acetyltransferase (GNAT) domain FIM01_RS01350 PF02705 K+ potassium transporter FIM01_RS01380 PF00230 Major intrinsic protein FIM01_RS01395 PF00977 Histidine biosynthesis protein FIM01_RS01400 PF01636 Phosphotransferase enzyme family FIM01_RS01425 PF00977 Histidine biosynthesis protein FIM01_RS01440 PF00117 Glutamine amidotransferase class-I FIM01_RS01445 PF00475 Imidazoleglycerol-phosphate dehydratase FIM01_RS01465 PF00583 Acetyltransferase (GNAT) family FIM01_RS01470 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FIM01_RS01470 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FIM01_RS01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS01480 PF00672 HAMP domain FIM01_RS01480 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS01485 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS01485 PF00072 Response regulator receiver domain FIM01_RS01490 PF09371 Tex-like protein N-terminal domain FIM01_RS01490 PF17674 HHH domain FIM01_RS01490 PF16921 Tex protein YqgF-like domain FIM01_RS01490 PF00575 S1 RNA binding domain FIM01_RS01495 PF01740 STAS domain FIM01_RS01495 PF00916 Sulfate permease family FIM01_RS01500 PF00106 short chain dehydrogenase FIM01_RS01505 PF01053 Cys/Met metabolism PLP-dependent enzyme FIM01_RS01510 PF12848 ABC transporter FIM01_RS01510 PF00005 ABC transporter FIM01_RS01535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIM01_RS01535 PF00529 HlyD membrane-fusion protein of T1SS FIM01_RS01540 PF00873 AcrB/AcrD/AcrF family FIM01_RS01545 PF01545 Cation efflux family FIM01_RS01575 PF00324 Amino acid permease FIM01_RS01590 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIM01_RS01605 PF01795 MraW methylase family FIM01_RS01615 PF03717 Penicillin-binding Protein dimerisation domain FIM01_RS01615 PF00905 Penicillin binding protein transpeptidase domain FIM01_RS01620 PF08245 Mur ligase middle domain FIM01_RS01620 PF01225 Mur ligase family, catalytic domain FIM01_RS01620 PF02875 Mur ligase family, glutamate ligase domain FIM01_RS01625 PF02875 Mur ligase family, glutamate ligase domain FIM01_RS01625 PF08245 Mur ligase middle domain FIM01_RS01625 PF01225 Mur ligase family, catalytic domain FIM01_RS01630 PF00953 Glycosyl transferase family 4 FIM01_RS01640 PF13847 Methyltransferase domain FIM01_RS01645 PF17092 Penicillin-binding protein OB-like domain FIM01_RS01645 PF00912 Transglycosylase FIM01_RS01645 PF00905 Penicillin binding protein transpeptidase domain FIM01_RS01650 PF11104 Type IV pilus assembly protein PilM; FIM01_RS01655 PF05137 Fimbrial assembly protein (PilN) FIM01_RS01660 PF04350 Pilus assembly protein, PilO FIM01_RS01670 PF00263 Bacterial type II and III secretion system protein FIM01_RS01670 PF11741 AMIN domain FIM01_RS01670 PF07660 Secretin and TonB N terminus short domain FIM01_RS01670 PF03958 Bacterial type II/III secretion system short domain FIM01_RS01675 PF01202 Shikimate kinase FIM01_RS01680 PF01761 3-dehydroquinate synthase FIM01_RS01690 PF01645 Conserved region in glutamate synthase FIM01_RS01690 PF04898 Glutamate synthase central domain FIM01_RS01690 PF00310 Glutamine amidotransferases class-II FIM01_RS01690 PF01493 GXGXG motif FIM01_RS01695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FIM01_RS01695 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS01705 PF04011 LemA family FIM01_RS01710 PF04536 TPM domain FIM01_RS01720 PF00114 Pilin (bacterial filament) FIM01_RS01720 PF07963 Prokaryotic N-terminal methylation motif FIM01_RS01725 PF11846 Virulence factor membrane-bound polymerase, C-terminal FIM01_RS01725 PF04932 O-Antigen ligase FIM01_RS01725 PF15864 Protein glycosylation ligase FIM01_RS01730 PF00210 Ferritin-like domain FIM01_RS01735 PF04324 BFD-like [2Fe-2S] binding domain FIM01_RS01740 PF01042 Endoribonuclease L-PSP FIM01_RS01745 PF13291 ACT domain FIM01_RS01745 PF04607 Region found in RelA / SpoT proteins FIM01_RS01745 PF02824 TGS domain FIM01_RS01755 PF01192 RNA polymerase Rpb6 FIM01_RS01760 PF00625 Guanylate kinase FIM01_RS01765 PF02401 LytB protein FIM01_RS01805 PF00886 Ribosomal protein S16 FIM01_RS01810 PF05239 PRC-barrel domain FIM01_RS01810 PF01782 RimM N-terminal domain FIM01_RS01815 PF01746 tRNA (Guanine-1)-methyltransferase FIM01_RS01820 PF01245 Ribosomal protein L19 FIM01_RS01825 PF00561 alpha/beta hydrolase fold FIM01_RS01830 PF03280 Proteobacterial lipase chaperone protein FIM01_RS01835 PF01509 TruB family pseudouridylate synthase (N terminal domain) FIM01_RS01835 PF16198 tRNA pseudouridylate synthase B C-terminal domain FIM01_RS01835 PF09157 Pseudouridine synthase II TruB, C-terminal FIM01_RS01840 PF01925 Sulfite exporter TauE/SafE FIM01_RS01850 PF00892 EamA-like transporter family FIM01_RS01855 PF00892 EamA-like transporter family FIM01_RS01860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIM01_RS01860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIM01_RS01865 PF02913 FAD linked oxidases, C-terminal domain FIM01_RS01865 PF01565 FAD binding domain FIM01_RS01875 PF03992 Antibiotic biosynthesis monooxygenase FIM01_RS01880 PF02525 Flavodoxin-like fold FIM01_RS01890 PF07690 Major Facilitator Superfamily FIM01_RS01895 PF12805 FUSC-like inner membrane protein yccS FIM01_RS01900 PF00080 Copper/zinc superoxide dismutase (SODC) FIM01_RS01905 PF13737 Transposase DDE domain FIM01_RS01910 PF01594 AI-2E family transporter FIM01_RS01915 PF13614 AAA domain FIM01_RS01935 PF08241 Methyltransferase domain FIM01_RS01945 PF00324 Amino acid permease FIM01_RS01950 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FIM01_RS01950 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FIM01_RS01955 PF00202 Aminotransferase class-III FIM01_RS01960 PF04958 Arginine N-succinyltransferase beta subunit FIM01_RS01965 PF00171 Aldehyde dehydrogenase family FIM01_RS01970 PF04996 Succinylarginine dihydrolase FIM01_RS01975 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FIM01_RS01990 PF05922 Peptidase inhibitor I9 FIM01_RS01990 PF00082 Subtilase family FIM01_RS02005 PF03466 LysR substrate binding domain FIM01_RS02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS02010 PF00892 EamA-like transporter family FIM01_RS02030 PF02092 Glycyl-tRNA synthetase beta subunit FIM01_RS02030 PF05746 DALR anticodon binding domain FIM01_RS02035 PF02091 Glycyl-tRNA synthetase alpha subunit FIM01_RS02040 PF07690 Major Facilitator Superfamily FIM01_RS02055 PF00571 CBS domain FIM01_RS02060 PF04024 PspC domain FIM01_RS02070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS02070 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS02070 PF12806 Acetyl-CoA dehydrogenase C-terminal like FIM01_RS02070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS02080 PF08501 Shikimate dehydrogenase substrate binding domain FIM01_RS02080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FIM01_RS02080 PF01488 Shikimate / quinate 5-dehydrogenase FIM01_RS02085 PF01218 Coproporphyrinogen III oxidase FIM01_RS02090 PF00925 GTP cyclohydrolase II FIM01_RS02095 PF02780 Transketolase, C-terminal domain FIM01_RS02095 PF02779 Transketolase, pyrimidine binding domain FIM01_RS02095 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FIM01_RS02100 PF00459 Inositol monophosphatase family FIM01_RS02105 PF12343 Cold shock protein DEAD box A FIM01_RS02105 PF03880 DbpA RNA binding domain FIM01_RS02105 PF00271 Helicase conserved C-terminal domain FIM01_RS02105 PF00270 DEAD/DEAH box helicase FIM01_RS02115 PF00005 ABC transporter FIM01_RS02120 PF02405 Permease MlaE FIM01_RS02130 PF05494 MlaC protein FIM01_RS02140 PF01544 CorA-like Mg2+ transporter protein FIM01_RS02145 PF03641 Possible lysine decarboxylase FIM01_RS02150 PF00293 NUDIX domain FIM01_RS02155 PF00156 Phosphoribosyl transferase domain FIM01_RS02160 PF00270 DEAD/DEAH box helicase FIM01_RS02160 PF17191 RecG wedge domain FIM01_RS02160 PF00271 Helicase conserved C-terminal domain FIM01_RS02175 PF01553 Acyltransferase FIM01_RS02185 PF00375 Sodium:dicarboxylate symporter family FIM01_RS02195 PF01926 50S ribosome-binding GTPase FIM01_RS02200 PF02082 Transcriptional regulator FIM01_RS02205 PF00175 Oxidoreductase NAD-binding domain FIM01_RS02205 PF00042 Globin FIM01_RS02205 PF00970 Oxidoreductase FAD-binding domain FIM01_RS02210 PF05872 Bacterial protein of unknown function (DUF853) FIM01_RS02215 PF01053 Cys/Met metabolism PLP-dependent enzyme FIM01_RS02220 PF00117 Glutamine amidotransferase class-I FIM01_RS02225 PF00338 Ribosomal protein S10p/S20e FIM01_RS02230 PF00297 Ribosomal protein L3 FIM01_RS02235 PF00573 Ribosomal protein L4/L1 family FIM01_RS02240 PF00276 Ribosomal protein L23 FIM01_RS02245 PF00181 Ribosomal Proteins L2, RNA binding domain FIM01_RS02245 PF03947 Ribosomal Proteins L2, C-terminal domain FIM01_RS02250 PF00203 Ribosomal protein S19 FIM01_RS02255 PF00237 Ribosomal protein L22p/L17e FIM01_RS02260 PF00189 Ribosomal protein S3, C-terminal domain FIM01_RS02260 PF07650 KH domain FIM01_RS02265 PF00252 Ribosomal protein L16p/L10e FIM01_RS02270 PF00831 Ribosomal L29 protein FIM01_RS02275 PF00366 Ribosomal protein S17 FIM01_RS02280 PF00238 Ribosomal protein L14p/L23e FIM01_RS02285 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FIM01_RS02285 PF00467 KOW motif FIM01_RS02290 PF00673 ribosomal L5P family C-terminus FIM01_RS02290 PF00281 Ribosomal protein L5 FIM01_RS02295 PF00253 Ribosomal protein S14p/S29e FIM01_RS02300 PF00410 Ribosomal protein S8 FIM01_RS02305 PF00347 Ribosomal protein L6 FIM01_RS02310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FIM01_RS02315 PF03719 Ribosomal protein S5, C-terminal domain FIM01_RS02315 PF00333 Ribosomal protein S5, N-terminal domain FIM01_RS02320 PF00327 Ribosomal protein L30p/L7e FIM01_RS02325 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FIM01_RS02330 PF00344 SecY translocase FIM01_RS02335 PF00444 Ribosomal protein L36 FIM01_RS02340 PF00416 Ribosomal protein S13/S18 FIM01_RS02345 PF00411 Ribosomal protein S11 FIM01_RS02350 PF01479 S4 domain FIM01_RS02350 PF00163 Ribosomal protein S4/S9 N-terminal domain FIM01_RS02355 PF01000 RNA polymerase Rpb3/RpoA insert domain FIM01_RS02355 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FIM01_RS02355 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FIM01_RS02360 PF01196 Ribosomal protein L17 FIM01_RS02365 PF00743 Flavin-binding monooxygenase-like FIM01_RS02370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS02370 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS02370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS02375 PF03937 Flavinator of succinate dehydrogenase FIM01_RS02405 PF09526 Probable metal-binding protein (DUF2387) FIM01_RS02410 PF01432 Peptidase family M3 FIM01_RS02415 PF17876 Cold shock domain FIM01_RS02415 PF08461 Ribonuclease R winged-helix domain FIM01_RS02415 PF08206 Ribonuclease B OB domain FIM01_RS02415 PF00773 RNB domain FIM01_RS02415 PF00575 S1 RNA binding domain FIM01_RS02460 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIM01_RS02465 PF12833 Helix-turn-helix domain FIM01_RS02470 PF00892 EamA-like transporter family FIM01_RS02475 PF03631 Virulence factor BrkB FIM01_RS02480 PF03358 NADPH-dependent FMN reductase FIM01_RS02505 PF02130 Uncharacterized protein family UPF0054 FIM01_RS02510 PF02562 PhoH-like protein FIM01_RS02515 PF00919 Uncharacterized protein family UPF0004 FIM01_RS02515 PF01938 TRAM domain FIM01_RS02515 PF04055 Radical SAM superfamily FIM01_RS02520 PF10145 Phage-related minor tail protein FIM01_RS02520 PF01464 Transglycosylase SLT domain FIM01_RS02520 PF01551 Peptidase family M23 FIM01_RS02530 PF00056 lactate/malate dehydrogenase, NAD binding domain FIM01_RS02530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FIM01_RS02550 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FIM01_RS02555 PF01066 CDP-alcohol phosphatidyltransferase FIM01_RS02600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS02600 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS02600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS02605 PF17932 Tetracyclin repressor-like, C-terminal domain FIM01_RS02605 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS02620 PF01039 Carboxyl transferase domain FIM01_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS02635 PF00364 Biotin-requiring enzyme FIM01_RS02635 PF00289 Biotin carboxylase, N-terminal domain FIM01_RS02635 PF02785 Biotin carboxylase C-terminal domain FIM01_RS02635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIM01_RS02645 PF04386 Stringent starvation protein B FIM01_RS02650 PF00043 Glutathione S-transferase, C-terminal domain FIM01_RS02650 PF13417 Glutathione S-transferase, N-terminal domain FIM01_RS02655 PF00380 Ribosomal protein S9/S16 FIM01_RS02660 PF00572 Ribosomal protein L13 FIM01_RS02665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FIM01_RS02670 PF00398 Ribosomal RNA adenine dimethylase FIM01_RS02675 PF00149 Calcineurin-like phosphoesterase FIM01_RS02695 PF13167 GTP-binding GTPase N-terminal FIM01_RS02695 PF01926 50S ribosome-binding GTPase FIM01_RS02695 PF16360 GTP-binding GTPase Middle Region FIM01_RS02705 PF13091 PLD-like domain FIM01_RS02710 PF10518 TAT (twin-arginine translocation) pathway signal sequence FIM01_RS02710 PF00149 Calcineurin-like phosphoesterase FIM01_RS02715 PF01389 OmpA-like transmembrane domain FIM01_RS02715 PF00691 OmpA family FIM01_RS02720 PF17152 Periplasmic sensor domain FIM01_RS02720 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS02755 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS02755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIM01_RS02765 PF04273 Putative phosphatase (DUF442) FIM01_RS02765 PF00753 Metallo-beta-lactamase superfamily FIM01_RS02770 PF00561 alpha/beta hydrolase fold FIM01_RS02775 PF00085 Thioredoxin FIM01_RS02780 PF03061 Thioesterase superfamily FIM01_RS02790 PF04461 Protein of unknown function (DUF520) FIM01_RS02800 PF01266 FAD dependent oxidoreductase FIM01_RS02800 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FIM01_RS02810 PF03795 YCII-related domain FIM01_RS02815 PF04279 Intracellular septation protein A FIM01_RS02820 PF02811 PHP domain FIM01_RS02825 PF01062 Bestrophin, RFP-TM, chloride channel FIM01_RS02830 PF04002 RadC-like JAB domain FIM01_RS02835 PF02441 Flavoprotein FIM01_RS02835 PF04127 DNA / pantothenate metabolism flavoprotein FIM01_RS02840 PF07549 SecD/SecF GG Motif FIM01_RS02840 PF02355 Protein export membrane protein FIM01_RS02845 PF13721 SecD export protein N-terminal TM region FIM01_RS02845 PF02355 Protein export membrane protein FIM01_RS02845 PF07549 SecD/SecF GG Motif FIM01_RS02850 PF02699 Preprotein translocase subunit FIM01_RS02855 PF01702 Queuine tRNA-ribosyltransferase FIM01_RS02870 PF02547 Queuosine biosynthesis protein FIM01_RS02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS02880 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS02880 PF07689 KaiB domain FIM01_RS02885 PF08335 GlnD PII-uridylyltransferase FIM01_RS02885 PF03710 Glutamate-ammonia ligase adenylyltransferase FIM01_RS02890 PF01063 Amino-transferase class IV FIM01_RS02905 PF01522 Polysaccharide deacetylase FIM01_RS02910 PF00535 Glycosyl transferase family 2 FIM01_RS02915 PF13439 Glycosyltransferase Family 4 FIM01_RS02915 PF00534 Glycosyl transferases group 1 FIM01_RS02940 PF11380 Stealth protein CR2, conserved region 2 FIM01_RS02940 PF17101 Stealth protein CR1, conserved region 1 FIM01_RS02940 PF17102 Stealth protein CR3, conserved region 3 FIM01_RS02945 PF02938 GAD domain FIM01_RS02945 PF00152 tRNA synthetases class II (D, K and N) FIM01_RS02945 PF01336 OB-fold nucleic acid binding domain FIM01_RS02955 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS02955 PF00593 TonB dependent receptor FIM01_RS02975 PF06146 Phosphate-starvation-inducible E FIM01_RS02980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS02980 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS02980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS02980 PF12806 Acetyl-CoA dehydrogenase C-terminal like FIM01_RS02985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS02985 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS02985 PF12806 Acetyl-CoA dehydrogenase C-terminal like FIM01_RS02985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS02995 PF00672 HAMP domain FIM01_RS02995 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS03000 PF00072 Response regulator receiver domain FIM01_RS03000 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS03005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FIM01_RS03025 PF01923 Cobalamin adenosyltransferase FIM01_RS03030 PF00593 TonB dependent receptor FIM01_RS03030 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS03035 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FIM01_RS03040 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS03065 PF00290 Tryptophan synthase alpha chain FIM01_RS03070 PF01039 Carboxyl transferase domain FIM01_RS03075 PF08245 Mur ligase middle domain FIM01_RS03075 PF02875 Mur ligase family, glutamate ligase domain FIM01_RS03090 PF00753 Metallo-beta-lactamase superfamily FIM01_RS03095 PF10417 C-terminal domain of 1-Cys peroxiredoxin FIM01_RS03095 PF00578 AhpC/TSA family FIM01_RS03100 PF02810 SEC-C motif FIM01_RS03100 PF07517 SecA DEAD-like domain FIM01_RS03100 PF01043 SecA preprotein cross-linking domain FIM01_RS03100 PF07516 SecA Wing and Scaffold domain FIM01_RS03110 PF00083 Sugar (and other) transporter FIM01_RS03110 PF07690 Major Facilitator Superfamily FIM01_RS03115 PF03006 Haemolysin-III related FIM01_RS03125 PF13673 Acetyltransferase (GNAT) domain FIM01_RS03140 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS03140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIM01_RS03140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIM01_RS03145 PF02803 Thiolase, C-terminal domain FIM01_RS03145 PF00108 Thiolase, N-terminal domain FIM01_RS03150 PF02311 AraC-like ligand binding domain FIM01_RS03150 PF12833 Helix-turn-helix domain FIM01_RS03155 PF02515 CoA-transferase family III FIM01_RS03160 PF04966 Carbohydrate-selective porin, OprB family FIM01_RS03165 PF01011 PQQ enzyme repeat FIM01_RS03170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIM01_RS03170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIM01_RS03180 PF00893 Small Multidrug Resistance protein FIM01_RS03190 PF02803 Thiolase, C-terminal domain FIM01_RS03190 PF00108 Thiolase, N-terminal domain FIM01_RS03200 PF13505 Outer membrane protein beta-barrel domain FIM01_RS03200 PF00691 OmpA family FIM01_RS03205 PF01139 tRNA-splicing ligase RtcB FIM01_RS03210 PF00324 Amino acid permease FIM01_RS03215 PF05175 Methyltransferase small domain FIM01_RS03215 PF08468 Methyltransferase small domain N-terminal FIM01_RS03220 PF00860 Permease family FIM01_RS03225 PF00679 Elongation factor G C-terminus FIM01_RS03225 PF00009 Elongation factor Tu GTP binding domain FIM01_RS03225 PF03144 Elongation factor Tu domain 2 FIM01_RS03230 PF01741 Large-conductance mechanosensitive channel, MscL FIM01_RS03245 PF06827 Zinc finger found in FPG and IleRS FIM01_RS03245 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FIM01_RS03245 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FIM01_RS03250 PF02245 Methylpurine-DNA glycosylase (MPG) FIM01_RS03255 PF00593 TonB dependent receptor FIM01_RS03255 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS03260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIM01_RS03265 PF03547 Membrane transport protein FIM01_RS03275 PF10411 Disulfide bond isomerase protein N-terminus FIM01_RS03275 PF13098 Thioredoxin-like domain FIM01_RS03280 PF01571 Aminomethyltransferase folate-binding domain FIM01_RS03290 PF04343 Protein of unknown function, DUF488 FIM01_RS03295 PF08274 PhnA Zinc-Ribbon FIM01_RS03295 PF03831 PhnA domain FIM01_RS03300 PF07411 Domain of unknown function (DUF1508) FIM01_RS03305 PF03129 Anticodon binding domain FIM01_RS03305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIM01_RS03305 PF04073 Aminoacyl-tRNA editing domain FIM01_RS03310 PF00873 AcrB/AcrD/AcrF family FIM01_RS03325 PF00072 Response regulator receiver domain FIM01_RS03330 PF00072 Response regulator receiver domain FIM01_RS03335 PF01584 CheW-like domain FIM01_RS03340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIM01_RS03340 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FIM01_RS03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS03345 PF01584 CheW-like domain FIM01_RS03345 PF00072 Response regulator receiver domain FIM01_RS03345 PF01627 Hpt domain FIM01_RS03355 PF06969 HemN C-terminal domain FIM01_RS03355 PF04055 Radical SAM superfamily FIM01_RS03365 PF01546 Peptidase family M20/M25/M40 FIM01_RS03365 PF07687 Peptidase dimerisation domain FIM01_RS03370 PF08085 Entericidin EcnA/B family FIM01_RS03380 PF04304 Protein of unknown function (DUF454) FIM01_RS03385 PF03734 L,D-transpeptidase catalytic domain FIM01_RS03385 PF17969 L,D-transpeptidase C-terminal domain FIM01_RS03425 PF00258 Flavodoxin FIM01_RS03425 PF00667 FAD binding domain FIM01_RS03425 PF00175 Oxidoreductase NAD-binding domain FIM01_RS03435 PF12805 FUSC-like inner membrane protein yccS FIM01_RS03440 PF07690 Major Facilitator Superfamily FIM01_RS03445 PF00881 Nitroreductase family FIM01_RS03460 PF01235 Sodium:alanine symporter family FIM01_RS03465 PF01734 Patatin-like phospholipase FIM01_RS03470 PF13291 ACT domain FIM01_RS03470 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS03475 PF05992 SbmA/BacA-like family FIM01_RS03500 PF02934 GatB/GatE catalytic domain FIM01_RS03500 PF02637 GatB domain FIM01_RS03505 PF01425 Amidase FIM01_RS03510 PF02686 Glu-tRNAGln amidotransferase C subunit FIM01_RS03520 PF04085 rod shape-determining protein MreC FIM01_RS03525 PF04093 rod shape-determining protein MreD FIM01_RS03530 PF02545 Maf-like protein FIM01_RS03535 PF00575 S1 RNA binding domain FIM01_RS03535 PF10150 Ribonuclease E/G family FIM01_RS03545 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FIM01_RS03545 PF06974 Protein of unknown function (DUF1298) FIM01_RS03550 PF01507 Phosphoadenosine phosphosulfate reductase family FIM01_RS03565 PF02525 Flavodoxin-like fold FIM01_RS03585 PF02673 Bacitracin resistance protein BacA FIM01_RS03590 PF12833 Helix-turn-helix domain FIM01_RS03590 PF06719 AraC-type transcriptional regulator N-terminus FIM01_RS03595 PF00698 Acyl transferase domain FIM01_RS03595 PF14765 Polyketide synthase dehydratase FIM01_RS03595 PF00109 Beta-ketoacyl synthase, N-terminal domain FIM01_RS03595 PF02801 Beta-ketoacyl synthase, C-terminal domain FIM01_RS03595 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS03595 PF16197 Ketoacyl-synthetase C-terminal extension FIM01_RS03595 PF09277 Erythronolide synthase, docking FIM01_RS03595 PF08659 KR domain FIM01_RS03595 PF08990 Erythronolide synthase docking FIM01_RS03595 PF00550 Phosphopantetheine attachment site FIM01_RS03600 PF01965 DJ-1/PfpI family FIM01_RS03665 PF02384 N-6 DNA Methylase FIM01_RS03665 PF12161 HsdM N-terminal domain FIM01_RS03695 PF14528 LAGLIDADG-like domain FIM01_RS03695 PF00772 DnaB-like helicase N terminal domain FIM01_RS03695 PF03796 DnaB-like helicase C terminal domain FIM01_RS03740 PF00149 Calcineurin-like phosphoesterase FIM01_RS03925 PF03869 Arc-like DNA binding domain FIM01_RS04000 PF13356 Arm DNA-binding domain FIM01_RS04000 PF00589 Phage integrase family FIM01_RS04005 PF00589 Phage integrase family FIM01_RS04065 PF01381 Helix-turn-helix FIM01_RS04065 PF00717 Peptidase S24-like FIM01_RS04090 PF00772 DnaB-like helicase N terminal domain FIM01_RS04090 PF03796 DnaB-like helicase C terminal domain FIM01_RS04310 PF00324 Amino acid permease FIM01_RS04315 PF04303 PrpF protein FIM01_RS04320 PF00348 Polyprenyl synthetase FIM01_RS04325 PF04237 YjbR FIM01_RS04330 PF01145 SPFH domain / Band 7 family FIM01_RS04340 PF01734 Patatin-like phospholipase FIM01_RS04360 PF00884 Sulfatase FIM01_RS04360 PF08019 Phosphoethanolamine transferase EptA/EptB FIM01_RS04365 PF00072 Response regulator receiver domain FIM01_RS04365 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS04370 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS04370 PF08521 Two-component sensor kinase N-terminal FIM01_RS04380 PF00909 Ammonium Transporter Family FIM01_RS04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS04390 PF03466 LysR substrate binding domain FIM01_RS04410 PF10458 Valyl tRNA synthetase tRNA binding arm FIM01_RS04410 PF08264 Anticodon-binding domain of tRNA FIM01_RS04410 PF00133 tRNA synthetases class I (I, L, M and V) FIM01_RS04430 PF01906 Putative heavy-metal-binding FIM01_RS04435 PF01906 Putative heavy-metal-binding FIM01_RS04440 PF02321 Outer membrane efflux protein FIM01_RS04445 PF00873 AcrB/AcrD/AcrF family FIM01_RS04450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIM01_RS04450 PF00529 HlyD membrane-fusion protein of T1SS FIM01_RS04455 PF01569 PAP2 superfamily FIM01_RS04465 PF00348 Polyprenyl synthetase FIM01_RS04475 PF00829 Ribosomal prokaryotic L21 protein FIM01_RS04480 PF01016 Ribosomal L27 protein FIM01_RS04485 PF03548 Outer membrane lipoprotein carrier protein LolA FIM01_RS04495 PF02403 Seryl-tRNA synthetase N-terminal domain FIM01_RS04495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIM01_RS04500 PF10414 Sirohaem synthase dimerisation region FIM01_RS04500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIM01_RS04500 PF14824 Sirohaem biosynthesis protein central FIM01_RS04505 PF00588 SpoU rRNA Methylase family FIM01_RS04510 PF01638 HxlR-like helix-turn-helix FIM01_RS04515 PF03358 NADPH-dependent FMN reductase FIM01_RS04520 PF13520 Amino acid permease FIM01_RS04525 PF00465 Iron-containing alcohol dehydrogenase FIM01_RS04535 PF03099 Biotin/lipoate A/B protein ligase family FIM01_RS04540 PF04359 Protein of unknown function (DUF493) FIM01_RS04545 PF03979 Sigma-70 factor, region 1.1 FIM01_RS04545 PF00140 Sigma-70 factor, region 1.2 FIM01_RS04545 PF04546 Sigma-70, non-essential region FIM01_RS04545 PF04545 Sigma-70, region 4 FIM01_RS04545 PF04539 Sigma-70 region 3 FIM01_RS04545 PF04542 Sigma-70 region 2 FIM01_RS04560 PF17773 UPF0176 acylphosphatase like domain FIM01_RS04560 PF00581 Rhodanese-like domain FIM01_RS04570 PF00285 Citrate synthase, C-terminal domain FIM01_RS04575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FIM01_RS04580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FIM01_RS04585 PF02910 Fumarate reductase flavoprotein C-term FIM01_RS04585 PF00890 FAD binding domain FIM01_RS04590 PF13085 2Fe-2S iron-sulfur cluster binding domain FIM01_RS04605 PF16870 2-oxoglutarate dehydrogenase C-terminal FIM01_RS04605 PF02779 Transketolase, pyrimidine binding domain FIM01_RS04605 PF00676 Dehydrogenase E1 component FIM01_RS04605 PF16078 2-oxoglutarate dehydrogenase N-terminus FIM01_RS04610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIM01_RS04610 PF00364 Biotin-requiring enzyme FIM01_RS04610 PF02817 e3 binding domain FIM01_RS04615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIM01_RS04615 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS04620 PF00549 CoA-ligase FIM01_RS04620 PF08442 ATP-grasp domain FIM01_RS04625 PF00549 CoA-ligase FIM01_RS04625 PF02629 CoA binding domain FIM01_RS04645 PF00579 tRNA synthetases class I (W and Y) FIM01_RS04650 PF05661 Protein of unknown function (DUF808) FIM01_RS04655 PF04228 Putative neutral zinc metallopeptidase FIM01_RS04660 PF00999 Sodium/hydrogen exchanger family FIM01_RS04675 PF09587 Bacterial capsule synthesis protein PGA_cap FIM01_RS04685 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIM01_RS04690 PF00582 Universal stress protein family FIM01_RS04695 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS04700 PF03449 Transcription elongation factor, N-terminal FIM01_RS04700 PF01272 Transcription elongation factor, GreA/GreB, C-term FIM01_RS04705 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FIM01_RS04705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIM01_RS04705 PF02142 MGS-like domain FIM01_RS04710 PF00117 Glutamine amidotransferase class-I FIM01_RS04710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FIM01_RS04725 PF01985 CRS1 / YhbY (CRM) domain FIM01_RS04730 PF01728 FtsJ-like methyltransferase FIM01_RS04735 PF17862 AAA+ lid domain FIM01_RS04735 PF00004 ATPase family associated with various cellular activities (AAA) FIM01_RS04735 PF01434 Peptidase family M41 FIM01_RS04735 PF06480 FtsH Extracellular FIM01_RS04740 PF00809 Pterin binding enzyme FIM01_RS04760 PF09423 PhoD-like phosphatase FIM01_RS04760 PF16655 PhoD-like phosphatase, N-terminal domain FIM01_RS04775 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FIM01_RS04775 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FIM01_RS04790 PF00083 Sugar (and other) transporter FIM01_RS04795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIM01_RS04795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIM01_RS04800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FIM01_RS04800 PF01266 FAD dependent oxidoreductase FIM01_RS04805 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FIM01_RS04805 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FIM01_RS04810 PF00781 Diacylglycerol kinase catalytic domain FIM01_RS04815 PF00149 Calcineurin-like phosphoesterase FIM01_RS04825 PF00166 Chaperonin 10 Kd subunit FIM01_RS04830 PF00118 TCP-1/cpn60 chaperonin family FIM01_RS04835 PF01219 Prokaryotic diacylglycerol kinase FIM01_RS04840 PF00753 Metallo-beta-lactamase superfamily FIM01_RS04845 PF03009 Glycerophosphoryl diester phosphodiesterase family FIM01_RS04850 PF00873 AcrB/AcrD/AcrF family FIM01_RS04860 PF01435 Peptidase family M48 FIM01_RS04865 PF01464 Transglycosylase SLT domain FIM01_RS04875 PF01171 PP-loop family FIM01_RS04885 PF01464 Transglycosylase SLT domain FIM01_RS04885 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIM01_RS04890 PF03449 Transcription elongation factor, N-terminal FIM01_RS04890 PF01272 Transcription elongation factor, GreA/GreB, C-term FIM01_RS04905 PF00975 Thioesterase domain FIM01_RS04905 PF00501 AMP-binding enzyme FIM01_RS04905 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS04905 PF00550 Phosphopantetheine attachment site FIM01_RS04905 PF00668 Condensation domain FIM01_RS04945 PF00881 Nitroreductase family FIM01_RS04960 PF02595 Glycerate kinase family FIM01_RS04965 PF00384 Molybdopterin oxidoreductase FIM01_RS04970 PF02634 FdhD/NarQ family FIM01_RS04975 PF06803 Protein of unknown function (DUF1232) FIM01_RS04980 PF11890 Domain of unknown function (DUF3410) FIM01_RS04980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIM01_RS04980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIM01_RS04985 PF00152 tRNA synthetases class II (D, K and N) FIM01_RS04995 PF18073 Rubredoxin metal binding domain FIM01_RS05000 PF00324 Amino acid permease FIM01_RS05010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIM01_RS05010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIM01_RS05015 PF01678 Diaminopimelate epimerase FIM01_RS05020 PF00561 alpha/beta hydrolase fold FIM01_RS05025 PF01810 LysE type translocator FIM01_RS05030 PF02899 Phage integrase, N-terminal SAM-like domain FIM01_RS05030 PF00589 Phage integrase family FIM01_RS05035 PF01012 Electron transfer flavoprotein domain FIM01_RS05040 PF00766 Electron transfer flavoprotein FAD-binding domain FIM01_RS05040 PF01012 Electron transfer flavoprotein domain FIM01_RS05045 PF00521 DNA gyrase/topoisomerase IV, subunit A FIM01_RS05045 PF03989 DNA gyrase C-terminal domain, beta-propeller FIM01_RS05060 PF00535 Glycosyl transferase family 2 FIM01_RS05080 PF13533 Biotin-lipoyl like FIM01_RS05090 PF00266 Aminotransferase class-V FIM01_RS05100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FIM01_RS05110 PF02687 FtsX-like permease family FIM01_RS05110 PF12704 MacB-like periplasmic core domain FIM01_RS05115 PF00005 ABC transporter FIM01_RS05120 PF00753 Metallo-beta-lactamase superfamily FIM01_RS05120 PF03772 Competence protein FIM01_RS05120 PF13567 Domain of unknown function (DUF4131) FIM01_RS05130 PF06965 Na+/H+ antiporter 1 FIM01_RS05130 PF01343 Peptidase family S49 FIM01_RS05135 PF12697 Alpha/beta hydrolase family FIM01_RS05140 PF00551 Formyl transferase FIM01_RS05145 PF02769 AIR synthase related protein, C-terminal domain FIM01_RS05145 PF00586 AIR synthase related protein, N-terminal domain FIM01_RS05150 PF01594 AI-2E family transporter FIM01_RS05155 PF00308 Bacterial dnaA protein FIM01_RS05155 PF08299 Bacterial dnaA protein helix-turn-helix FIM01_RS05155 PF11638 DnaA N-terminal domain FIM01_RS05185 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIM01_RS05185 PF00588 SpoU rRNA Methylase family FIM01_RS05190 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FIM01_RS05200 PF00691 OmpA family FIM01_RS05215 PF02472 Biopolymer transport protein ExbD/TolR FIM01_RS05220 PF01618 MotA/TolQ/ExbB proton channel family FIM01_RS05225 PF03061 Thioesterase superfamily FIM01_RS05230 PF01546 Peptidase family M20/M25/M40 FIM01_RS05230 PF07687 Peptidase dimerisation domain FIM01_RS05235 PF05491 RuvB C-terminal winged helix domain FIM01_RS05235 PF17864 RuvB AAA lid domain FIM01_RS05235 PF05496 Holliday junction DNA helicase RuvB P-loop domain FIM01_RS05240 PF01330 RuvA N terminal domain FIM01_RS05240 PF07499 RuvA, C-terminal domain FIM01_RS05245 PF01966 HD domain FIM01_RS05250 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FIM01_RS05250 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FIM01_RS05250 PF02769 AIR synthase related protein, C-terminal domain FIM01_RS05255 PF07690 Major Facilitator Superfamily FIM01_RS05260 PF01784 NIF3 (NGG1p interacting factor 3) FIM01_RS05265 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS05270 PF00293 NUDIX domain FIM01_RS05270 PF01467 Cytidylyltransferase-like FIM01_RS05280 PF00578 AhpC/TSA family FIM01_RS05295 PF06508 Queuosine biosynthesis protein QueC FIM01_RS05305 PF14602 Hexapeptide repeat of succinyl-transferase FIM01_RS05305 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS05305 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FIM01_RS05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS05315 PF03466 LysR substrate binding domain FIM01_RS05320 PF12857 TOBE-like domain FIM01_RS05320 PF00005 ABC transporter FIM01_RS05325 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS05330 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS05345 PF01063 Amino-transferase class IV FIM01_RS05350 PF02618 YceG-like family FIM01_RS05355 PF02223 Thymidylate kinase FIM01_RS05365 PF02910 Fumarate reductase flavoprotein C-term FIM01_RS05365 PF00890 FAD binding domain FIM01_RS05370 PF13180 PDZ domain FIM01_RS05380 PF00679 Elongation factor G C-terminus FIM01_RS05380 PF00009 Elongation factor Tu GTP binding domain FIM01_RS05380 PF03144 Elongation factor Tu domain 2 FIM01_RS05380 PF06421 GTP-binding protein LepA C-terminus FIM01_RS05385 PF10502 Signal peptidase, peptidase S26 FIM01_RS05395 PF14622 Ribonuclease-III-like FIM01_RS05395 PF00035 Double-stranded RNA binding motif FIM01_RS05400 PF07650 KH domain FIM01_RS05400 PF01926 50S ribosome-binding GTPase FIM01_RS05410 PF11967 Recombination protein O N terminal FIM01_RS05410 PF02565 Recombination protein O C terminal FIM01_RS05415 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FIM01_RS05420 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FIM01_RS05425 PF00106 short chain dehydrogenase FIM01_RS05455 PF00155 Aminotransferase class I and II FIM01_RS05465 PF17151 Periplasmic sensor domain FIM01_RS05465 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS05475 PF02151 UvrB/uvrC motif FIM01_RS05475 PF04851 Type III restriction enzyme, res subunit FIM01_RS05475 PF00271 Helicase conserved C-terminal domain FIM01_RS05475 PF12344 Ultra-violet resistance protein B FIM01_RS05475 PF17757 UvrB interaction domain FIM01_RS05485 PF00892 EamA-like transporter family FIM01_RS05490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIM01_RS05490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIM01_RS05505 PF01926 50S ribosome-binding GTPase FIM01_RS05505 PF01018 GTP1/OBG FIM01_RS05510 PF00696 Amino acid kinase family FIM01_RS05510 PF01472 PUA domain FIM01_RS05520 PF07759 Protein of unknown function (DUF1615) FIM01_RS05525 PF01207 Dihydrouridine synthase (Dus) FIM01_RS05530 PF03060 Nitronate monooxygenase FIM01_RS05545 PF02350 UDP-N-acetylglucosamine 2-epimerase FIM01_RS05575 PF00875 DNA photolyase FIM01_RS05575 PF03441 FAD binding domain of DNA photolyase FIM01_RS05580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIM01_RS05585 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS05590 PF07943 Penicillin-binding protein 5, C-terminal domain FIM01_RS05590 PF00768 D-alanyl-D-alanine carboxypeptidase FIM01_RS05600 PF03971 Monomeric isocitrate dehydrogenase FIM01_RS05605 PF00849 RNA pseudouridylate synthase FIM01_RS05610 PF00180 Isocitrate/isopropylmalate dehydrogenase FIM01_RS05630 PF06779 Uncharacterised MFS-type transporter YbfB FIM01_RS05635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS05635 PF03466 LysR substrate binding domain FIM01_RS05640 PF00375 Sodium:dicarboxylate symporter family FIM01_RS05645 PF02567 Phenazine biosynthesis-like protein FIM01_RS05650 PF05193 Peptidase M16 inactive domain FIM01_RS05650 PF00675 Insulinase (Peptidase family M16) FIM01_RS05675 PF01867 CRISPR associated protein Cas1 FIM01_RS05685 PF09611 CRISPR-associated protein (Cas_Csy1) FIM01_RS05690 PF09614 CRISPR-associated protein (Cas_Csy2) FIM01_RS05695 PF09615 CRISPR-associated protein (Cas_Csy3) FIM01_RS05705 PF02581 Thiamine monophosphate synthase FIM01_RS05710 PF00202 Aminotransferase class-III FIM01_RS05720 PF00849 RNA pseudouridylate synthase FIM01_RS05725 PF18337 RapA N-terminal Tudor like domain FIM01_RS05725 PF12137 RNA polymerase recycling family C-terminal FIM01_RS05725 PF00176 SNF2 family N-terminal domain FIM01_RS05725 PF18339 RapA N-terminal Tudor like domain 1 FIM01_RS05725 PF00271 Helicase conserved C-terminal domain FIM01_RS05735 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS05740 PF00970 Oxidoreductase FAD-binding domain FIM01_RS05740 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS05740 PF00175 Oxidoreductase NAD-binding domain FIM01_RS05745 PF00487 Fatty acid desaturase FIM01_RS05755 PF17754 MftR C-terminal domain FIM01_RS05755 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS05765 PF00202 Aminotransferase class-III FIM01_RS05770 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIM01_RS05775 PF00171 Aldehyde dehydrogenase family FIM01_RS05780 PF01037 Lrp/AsnC ligand binding domain FIM01_RS05785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIM01_RS05785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIM01_RS05785 PF00205 Thiamine pyrophosphate enzyme, central domain FIM01_RS05790 PF00324 Amino acid permease FIM01_RS05795 PF12849 PBP superfamily domain FIM01_RS05800 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS05810 PF00005 ABC transporter FIM01_RS05815 PF08496 Peptidase family S49 N-terminal FIM01_RS05815 PF01343 Peptidase family S49 FIM01_RS05830 PF00206 Lyase FIM01_RS05830 PF08328 Adenylosuccinate lyase C-terminal FIM01_RS05835 PF04356 Protein of unknown function (DUF489) FIM01_RS05845 PF13344 Haloacid dehalogenase-like hydrolase FIM01_RS05845 PF00293 NUDIX domain FIM01_RS05850 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS05855 PF00768 D-alanyl-D-alanine carboxypeptidase FIM01_RS05855 PF07943 Penicillin-binding protein 5, C-terminal domain FIM01_RS05870 PF01975 Survival protein SurE FIM01_RS05875 PF01551 Peptidase family M23 FIM01_RS05875 PF01476 LysM domain FIM01_RS05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS05880 PF03466 LysR substrate binding domain FIM01_RS05885 PF13654 AAA domain FIM01_RS05885 PF05362 Lon protease (S16) C-terminal proteolytic domain FIM01_RS05890 PF07690 Major Facilitator Superfamily FIM01_RS05895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIM01_RS05900 PF13593 SBF-like CPA transporter family (DUF4137) FIM01_RS05905 PF01197 Ribosomal protein L31 FIM01_RS05910 PF12792 CSS motif domain associated with EAL FIM01_RS05910 PF00563 EAL domain FIM01_RS05920 PF04055 Radical SAM superfamily FIM01_RS05925 PF08207 Elongation factor P (EF-P) KOW-like domain FIM01_RS05925 PF09285 Elongation factor P, C-terminal FIM01_RS05925 PF01132 Elongation factor P (EF-P) OB domain FIM01_RS05930 PF02554 Carbon starvation protein CstA FIM01_RS05930 PF13722 5TM C-terminal transporter carbon starvation CstA FIM01_RS05935 PF04328 Selenoprotein, putative FIM01_RS05945 PF03466 LysR substrate binding domain FIM01_RS05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS05950 PF00557 Metallopeptidase family M24 FIM01_RS05955 PF02028 BCCT, betaine/carnitine/choline family transporter FIM01_RS05960 PF02028 BCCT, betaine/carnitine/choline family transporter FIM01_RS05965 PF00355 Rieske [2Fe-2S] domain FIM01_RS05965 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FIM01_RS05970 PF00171 Aldehyde dehydrogenase family FIM01_RS05975 PF18113 Rubredoxin binding C-terminal domain FIM01_RS05975 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS05980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FIM01_RS05980 PF01266 FAD dependent oxidoreductase FIM01_RS06000 PF00892 EamA-like transporter family FIM01_RS06010 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FIM01_RS06035 PF17954 Quercetinase C-terminal cupin domain FIM01_RS06035 PF02678 Pirin FIM01_RS06040 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS06045 PF08348 YheO-like PAS domain FIM01_RS06045 PF13309 HTH domain FIM01_RS06055 PF00501 AMP-binding enzyme FIM01_RS06055 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS06055 PF00668 Condensation domain FIM01_RS06055 PF00550 Phosphopantetheine attachment site FIM01_RS06060 PF00668 Condensation domain FIM01_RS06060 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS06060 PF00501 AMP-binding enzyme FIM01_RS06060 PF00975 Thioesterase domain FIM01_RS06060 PF00550 Phosphopantetheine attachment site FIM01_RS06065 PF01032 FecCD transport family FIM01_RS06070 PF01032 FecCD transport family FIM01_RS06075 PF00005 ABC transporter FIM01_RS06080 PF01497 Periplasmic binding protein FIM01_RS06085 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS06085 PF00593 TonB dependent receptor FIM01_RS06090 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FIM01_RS06095 PF00550 Phosphopantetheine attachment site FIM01_RS06095 PF00668 Condensation domain FIM01_RS06095 PF00501 AMP-binding enzyme FIM01_RS06100 PF00501 AMP-binding enzyme FIM01_RS06100 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS06105 PF00857 Isochorismatase family FIM01_RS06105 PF00550 Phosphopantetheine attachment site FIM01_RS06110 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIM01_RS06120 PF00005 ABC transporter FIM01_RS06120 PF00664 ABC transporter transmembrane region FIM01_RS06125 PF00005 ABC transporter FIM01_RS06130 PF00975 Thioesterase domain FIM01_RS06140 PF00425 chorismate binding enzyme FIM01_RS06150 PF01208 Uroporphyrinogen decarboxylase (URO-D) FIM01_RS06155 PF05675 Protein of unknown function (DUF817) FIM01_RS06170 PF00144 Beta-lactamase FIM01_RS06180 PF01227 GTP cyclohydrolase I FIM01_RS06185 PF01799 [2Fe-2S] binding domain FIM01_RS06185 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS06190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIM01_RS06190 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIM01_RS06205 PF00218 Indole-3-glycerol phosphate synthase FIM01_RS06210 PF02885 Glycosyl transferase family, helical bundle domain FIM01_RS06210 PF00591 Glycosyl transferase family, a/b domain FIM01_RS06215 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS06215 PF00593 TonB dependent receptor FIM01_RS06220 PF01433 Peptidase family M1 domain FIM01_RS06220 PF11838 ERAP1-like C-terminal domain FIM01_RS06225 PF00117 Glutamine amidotransferase class-I FIM01_RS06235 PF00854 POT family FIM01_RS06240 PF03951 Glutamine synthetase, beta-Grasp domain FIM01_RS06240 PF00120 Glutamine synthetase, catalytic domain FIM01_RS06245 PF04345 Chorismate lyase FIM01_RS06250 PF01040 UbiA prenyltransferase family FIM01_RS06285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FIM01_RS06285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FIM01_RS06290 PF01784 NIF3 (NGG1p interacting factor 3) FIM01_RS06295 PF13180 PDZ domain FIM01_RS06300 PF01743 Poly A polymerase head domain FIM01_RS06300 PF12627 Probable RNA and SrmB- binding site of polymerase A FIM01_RS06305 PF01515 Phosphate acetyl/butaryl transferase FIM01_RS06305 PF03949 Malic enzyme, NAD binding domain FIM01_RS06305 PF00390 Malic enzyme, N-terminal domain FIM01_RS06310 PF03707 Bacterial signalling protein N terminal repeat FIM01_RS06310 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS06310 PF00563 EAL domain FIM01_RS06315 PF04452 RNA methyltransferase FIM01_RS06320 PF02219 Methylenetetrahydrofolate reductase FIM01_RS06325 PF05221 S-adenosyl-L-homocysteine hydrolase FIM01_RS06325 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FIM01_RS06340 PF09317 Domain of unknown function (DUF1974) FIM01_RS06340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS06340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS06345 PF04055 Radical SAM superfamily FIM01_RS06350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS06350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIM01_RS06360 PF07690 Major Facilitator Superfamily FIM01_RS06370 PF00557 Metallopeptidase family M24 FIM01_RS06375 PF00318 Ribosomal protein S2 FIM01_RS06380 PF00889 Elongation factor TS FIM01_RS06390 PF12833 Helix-turn-helix domain FIM01_RS06410 PF03330 Lytic transglycolase FIM01_RS06410 PF05036 Sporulation related domain FIM01_RS06415 PF13406 Transglycosylase SLT domain FIM01_RS06420 PF01098 Cell cycle protein FIM01_RS06430 PF14489 QueF-like protein FIM01_RS06430 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FIM01_RS06435 PF01061 ABC-2 type transporter FIM01_RS06440 PF00005 ABC transporter FIM01_RS06445 PF00589 Phage integrase family FIM01_RS06485 PF06630 Enterobacterial exodeoxyribonuclease VIII FIM01_RS06485 PF12684 PDDEXK-like domain of unknown function (DUF3799) FIM01_RS06550 PF03796 DnaB-like helicase C terminal domain FIM01_RS06550 PF00772 DnaB-like helicase N terminal domain FIM01_RS06770 PF01476 LysM domain FIM01_RS06770 PF08525 Opacity-associated protein A N-terminal motif FIM01_RS06770 PF01551 Peptidase family M23 FIM01_RS06860 PF00464 Serine hydroxymethyltransferase FIM01_RS06865 PF02321 Outer membrane efflux protein FIM01_RS06870 PF00873 AcrB/AcrD/AcrF family FIM01_RS06875 PF13533 Biotin-lipoyl like FIM01_RS06880 PF03466 LysR substrate binding domain FIM01_RS06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS06885 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIM01_RS06890 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS06895 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS06905 PF00893 Small Multidrug Resistance protein FIM01_RS06910 PF00037 4Fe-4S binding domain FIM01_RS06915 PF16325 Peptidase family U32 C-terminal domain FIM01_RS06915 PF01136 Peptidase family U32 FIM01_RS06920 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS06920 PF00155 Aminotransferase class I and II FIM01_RS06925 PF02567 Phenazine biosynthesis-like protein FIM01_RS06930 PF00175 Oxidoreductase NAD-binding domain FIM01_RS06930 PF00970 Oxidoreductase FAD-binding domain FIM01_RS06935 PF18389 TrmO C-terminal domain FIM01_RS06935 PF01980 tRNA-methyltransferase O FIM01_RS06945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FIM01_RS06945 PF00437 Type II/IV secretion system protein FIM01_RS06955 PF00072 Response regulator receiver domain FIM01_RS06955 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS06960 PF08521 Two-component sensor kinase N-terminal FIM01_RS06960 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS06970 PF00293 NUDIX domain FIM01_RS06980 PF00912 Transglycosylase FIM01_RS06980 PF14814 Bifunctional transglycosylase second domain FIM01_RS06980 PF00905 Penicillin binding protein transpeptidase domain FIM01_RS06985 PF01513 ATP-NAD kinase FIM01_RS06990 PF07023 Protein of unknown function (DUF1315) FIM01_RS06995 PF00591 Glycosyl transferase family, a/b domain FIM01_RS06995 PF02885 Glycosyl transferase family, helical bundle domain FIM01_RS07005 PF00375 Sodium:dicarboxylate symporter family FIM01_RS07010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS07010 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS07010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS07015 PF00756 Putative esterase FIM01_RS07020 PF01842 ACT domain FIM01_RS07020 PF01817 Chorismate mutase type II FIM01_RS07020 PF00800 Prephenate dehydratase FIM01_RS07025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIM01_RS07035 PF07687 Peptidase dimerisation domain FIM01_RS07035 PF01546 Peptidase family M20/M25/M40 FIM01_RS07040 PF00753 Metallo-beta-lactamase superfamily FIM01_RS07050 PF03883 Peroxide stress protein YaaA FIM01_RS07055 PF05690 Thiazole biosynthesis protein ThiG FIM01_RS07065 PF04241 Protein of unknown function (DUF423) FIM01_RS07070 PF04542 Sigma-70 region 2 FIM01_RS07070 PF04545 Sigma-70, region 4 FIM01_RS07070 PF00140 Sigma-70 factor, region 1.2 FIM01_RS07080 PF00313 'Cold-shock' DNA-binding domain FIM01_RS07085 PF00271 Helicase conserved C-terminal domain FIM01_RS07085 PF00270 DEAD/DEAH box helicase FIM01_RS07095 PF00881 Nitroreductase family FIM01_RS07100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FIM01_RS07100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FIM01_RS07110 PF00589 Phage integrase family FIM01_RS07165 PF00717 Peptidase S24-like FIM01_RS07165 PF01381 Helix-turn-helix FIM01_RS07190 PF00772 DnaB-like helicase N terminal domain FIM01_RS07190 PF03796 DnaB-like helicase C terminal domain FIM01_RS07420 PF01476 LysM domain FIM01_RS07420 PF08525 Opacity-associated protein A N-terminal motif FIM01_RS07420 PF01551 Peptidase family M23 FIM01_RS07495 PF01180 Dihydroorotate dehydrogenase FIM01_RS07500 PF02674 Colicin V production protein FIM01_RS07505 PF00156 Phosphoribosyl transferase domain FIM01_RS07520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIM01_RS07520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIM01_RS07525 PF01435 Peptidase family M48 FIM01_RS07530 PF09424 Yqey-like protein FIM01_RS07535 PF01165 Ribosomal protein S21 FIM01_RS07540 PF00814 Glycoprotease family FIM01_RS07560 PF00069 Protein kinase domain FIM01_RS07585 PF03466 LysR substrate binding domain FIM01_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS07590 PF00202 Aminotransferase class-III FIM01_RS07595 PF00171 Aldehyde dehydrogenase family FIM01_RS07600 PF00324 Amino acid permease FIM01_RS07630 PF04076 Bacterial OB fold (BOF) protein FIM01_RS07655 PF00561 alpha/beta hydrolase fold FIM01_RS07660 PF03616 Sodium/glutamate symporter FIM01_RS07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS07670 PF03466 LysR substrate binding domain FIM01_RS07675 PF00248 Aldo/keto reductase family FIM01_RS07680 PF00106 short chain dehydrogenase FIM01_RS07695 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS07695 PF07729 FCD domain FIM01_RS07755 PF00083 Sugar (and other) transporter FIM01_RS07755 PF08946 Osmosensory transporter coiled coil FIM01_RS07780 PF04403 Paraquat-inducible protein A FIM01_RS07785 PF02470 MlaD protein FIM01_RS07795 PF00576 HIUase/Transthyretin family FIM01_RS07805 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS07805 PF00072 Response regulator receiver domain FIM01_RS07810 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS07810 PF00672 HAMP domain FIM01_RS07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS07850 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS07850 PF08521 Two-component sensor kinase N-terminal FIM01_RS07855 PF00072 Response regulator receiver domain FIM01_RS07855 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS07875 PF01177 Asp/Glu/Hydantoin racemase FIM01_RS07880 PF00892 EamA-like transporter family FIM01_RS07885 PF07995 Glucose / Sorbosone dehydrogenase FIM01_RS07905 PF00375 Sodium:dicarboxylate symporter family FIM01_RS07915 PF00753 Metallo-beta-lactamase superfamily FIM01_RS07915 PF16123 Hydroxyacylglutathione hydrolase C-terminus FIM01_RS07920 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS07925 PF00005 ABC transporter FIM01_RS07925 PF09383 NIL domain FIM01_RS07930 PF03180 NLPA lipoprotein FIM01_RS07935 PF02844 Phosphoribosylglycinamide synthetase, N domain FIM01_RS07935 PF02843 Phosphoribosylglycinamide synthetase, C domain FIM01_RS07935 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FIM01_RS07940 PF01808 AICARFT/IMPCHase bienzyme FIM01_RS07940 PF02142 MGS-like domain FIM01_RS07945 PF02954 Bacterial regulatory protein, Fis family FIM01_RS07965 PF13932 GidA associated domain FIM01_RS07965 PF01134 Glucose inhibited division protein A FIM01_RS07975 PF14403 Circularly permuted ATP-grasp type 2 FIM01_RS07985 PF01841 Transglutaminase-like superfamily FIM01_RS07985 PF08379 Bacterial transglutaminase-like N-terminal region FIM01_RS07995 PF01168 Alanine racemase, N-terminal domain FIM01_RS07995 PF00842 Alanine racemase, C-terminal domain FIM01_RS08000 PF00772 DnaB-like helicase N terminal domain FIM01_RS08000 PF03796 DnaB-like helicase C terminal domain FIM01_RS08005 PF03948 Ribosomal protein L9, C-terminal domain FIM01_RS08005 PF01281 Ribosomal protein L9, N-terminal domain FIM01_RS08010 PF01084 Ribosomal protein S18 FIM01_RS08015 PF01250 Ribosomal protein S6 FIM01_RS08020 PF01040 UbiA prenyltransferase family FIM01_RS08025 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FIM01_RS08030 PF00510 Cytochrome c oxidase subunit III FIM01_RS08035 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIM01_RS08040 PF06481 COX Aromatic Rich Motif FIM01_RS08040 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FIM01_RS08050 PF02896 PEP-utilising enzyme, TIM barrel domain FIM01_RS08050 PF00391 PEP-utilising enzyme, mobile domain FIM01_RS08050 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FIM01_RS08055 PF03618 Kinase/pyrophosphorylase FIM01_RS08065 PF01522 Polysaccharide deacetylase FIM01_RS08065 PF14883 Hypothetical glycosyl hydrolase family 13 FIM01_RS08070 PF00535 Glycosyl transferase family 2 FIM01_RS08075 PF13994 PgaD-like protein FIM01_RS08085 PF00296 Luciferase-like monooxygenase FIM01_RS08105 PF03466 LysR substrate binding domain FIM01_RS08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS08115 PF00472 RF-1 domain FIM01_RS08115 PF03462 PCRF domain FIM01_RS08120 PF13847 Methyltransferase domain FIM01_RS08120 PF17827 PrmC N-terminal domain FIM01_RS08125 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS08130 PF09084 NMT1/THI5 like FIM01_RS08135 PF12833 Helix-turn-helix domain FIM01_RS08140 PF00106 short chain dehydrogenase FIM01_RS08145 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS08145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS08145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS08150 PF00501 AMP-binding enzyme FIM01_RS08150 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS08155 PF01613 Flavin reductase like domain FIM01_RS08160 PF00899 ThiF family FIM01_RS08165 PF03109 ABC1 family FIM01_RS08180 PF03814 Potassium-transporting ATPase A subunit FIM01_RS08190 PF02669 K+-transporting ATPase, c chain FIM01_RS08195 PF02702 Osmosensitive K+ channel His kinase sensor domain FIM01_RS08195 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS08195 PF13493 Domain of unknown function (DUF4118) FIM01_RS08200 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS08200 PF00072 Response regulator receiver domain FIM01_RS08205 PF00120 Glutamine synthetase, catalytic domain FIM01_RS08215 PF03232 Ubiquinone biosynthesis protein COQ7 FIM01_RS08220 PF07690 Major Facilitator Superfamily FIM01_RS08225 PF01103 Surface antigen FIM01_RS08225 PF07244 Surface antigen variable number repeat FIM01_RS08225 PF17243 POTRA domain TamA domain 1 FIM01_RS08245 PF00330 Aconitase family (aconitate hydratase) FIM01_RS08245 PF06434 Aconitate hydratase 2 N-terminus FIM01_RS08245 PF11791 Aconitate B N-terminal domain FIM01_RS08255 PF00520 Ion transport protein FIM01_RS08255 PF00027 Cyclic nucleotide-binding domain FIM01_RS08260 PF07690 Major Facilitator Superfamily FIM01_RS08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS08275 PF03466 LysR substrate binding domain FIM01_RS08280 PF04284 Protein of unknown function (DUF441) FIM01_RS08290 PF00849 RNA pseudouridylate synthase FIM01_RS08290 PF01479 S4 domain FIM01_RS08305 PF00849 RNA pseudouridylate synthase FIM01_RS08305 PF01479 S4 domain FIM01_RS08310 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FIM01_RS08315 PF08676 MutL C terminal dimerisation domain FIM01_RS08315 PF01119 DNA mismatch repair protein, C-terminal domain FIM01_RS08325 PF17209 Hfq protein FIM01_RS08335 PF00881 Nitroreductase family FIM01_RS08345 PF00149 Calcineurin-like phosphoesterase FIM01_RS08350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIM01_RS08355 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIM01_RS08355 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FIM01_RS08360 PF02540 NAD synthase FIM01_RS08360 PF00117 Glutamine amidotransferase class-I FIM01_RS08360 PF00958 GMP synthase C terminal domain FIM01_RS08365 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FIM01_RS08370 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FIM01_RS08375 PF13520 Amino acid permease FIM01_RS08380 PF00171 Aldehyde dehydrogenase family FIM01_RS08395 PF00465 Iron-containing alcohol dehydrogenase FIM01_RS08400 PF14493 Helix-turn-helix domain FIM01_RS08400 PF05970 PIF1-like helicase FIM01_RS08410 PF02110 Hydroxyethylthiazole kinase family FIM01_RS08425 PF01433 Peptidase family M1 domain FIM01_RS08425 PF11940 Domain of unknown function (DUF3458) Ig-like fold FIM01_RS08425 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FIM01_RS08440 PF00577 Outer membrane usher protein FIM01_RS08440 PF13954 PapC N-terminal domain FIM01_RS08440 PF13953 PapC C-terminal domain FIM01_RS08465 PF01817 Chorismate mutase type II FIM01_RS08470 PF01037 Lrp/AsnC ligand binding domain FIM01_RS08485 PF02224 Cytidylate kinase FIM01_RS08505 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS08510 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS08510 PF00593 TonB dependent receptor FIM01_RS08515 PF00924 Mechanosensitive ion channel FIM01_RS08545 PF00593 TonB dependent receptor FIM01_RS08545 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS08565 PF00005 ABC transporter FIM01_RS08565 PF12848 ABC transporter FIM01_RS08570 PF00582 Universal stress protein family FIM01_RS08585 PF00689 Cation transporting ATPase, C-terminus FIM01_RS08585 PF00690 Cation transporter/ATPase, N-terminus FIM01_RS08590 PF02308 MgtC family FIM01_RS08600 PF01037 Lrp/AsnC ligand binding domain FIM01_RS08605 PF01810 LysE type translocator FIM01_RS08610 PF00923 Transaldolase/Fructose-6-phosphate aldolase FIM01_RS08615 PF03466 LysR substrate binding domain FIM01_RS08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS08625 PF02803 Thiolase, C-terminal domain FIM01_RS08625 PF00108 Thiolase, N-terminal domain FIM01_RS08635 PF01575 MaoC like domain FIM01_RS08640 PF00144 Beta-lactamase FIM01_RS08650 PF07690 Major Facilitator Superfamily FIM01_RS08655 PF12170 DNA polymerase III tau subunit V interacting with alpha FIM01_RS08655 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FIM01_RS08655 PF12169 DNA polymerase III subunits gamma and tau domain III FIM01_RS08660 PF04185 Phosphoesterase family FIM01_RS08660 PF05506 Domain of unknown function (DUF756) FIM01_RS08665 PF03061 Thioesterase superfamily FIM01_RS08670 PF00465 Iron-containing alcohol dehydrogenase FIM01_RS08680 PF01451 Low molecular weight phosphotyrosine protein phosphatase FIM01_RS08685 PF01565 FAD binding domain FIM01_RS08685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FIM01_RS08700 PF01645 Conserved region in glutamate synthase FIM01_RS08720 PF12832 MFS_1 like family FIM01_RS08730 PF00289 Biotin carboxylase, N-terminal domain FIM01_RS08730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIM01_RS08730 PF02785 Biotin carboxylase C-terminal domain FIM01_RS08735 PF00364 Biotin-requiring enzyme FIM01_RS08740 PF01220 Dehydroquinase class II FIM01_RS08745 PF13438 Domain of unknown function (DUF4113) FIM01_RS08745 PF11799 impB/mucB/samB family C-terminal domain FIM01_RS08745 PF00817 impB/mucB/samB family FIM01_RS08755 PF00005 ABC transporter FIM01_RS08760 PF00072 Response regulator receiver domain FIM01_RS08760 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS08770 PF18267 Rubredoxin NAD+ reductase C-terminal domain FIM01_RS08770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIM01_RS08770 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS08770 PF13806 Rieske-like [2Fe-2S] domain FIM01_RS08770 PF04324 BFD-like [2Fe-2S] binding domain FIM01_RS08770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIM01_RS08775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIM01_RS08775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIM01_RS08775 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS08775 PF18267 Rubredoxin NAD+ reductase C-terminal domain FIM01_RS08775 PF04324 BFD-like [2Fe-2S] binding domain FIM01_RS08780 PF01568 Molydopterin dinucleotide binding domain FIM01_RS08780 PF00384 Molybdopterin oxidoreductase FIM01_RS08780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIM01_RS08780 PF04324 BFD-like [2Fe-2S] binding domain FIM01_RS08785 PF12804 MobA-like NTP transferase domain FIM01_RS08790 PF01568 Molydopterin dinucleotide binding domain FIM01_RS08790 PF00384 Molybdopterin oxidoreductase FIM01_RS08790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIM01_RS08795 PF04055 Radical SAM superfamily FIM01_RS08795 PF06463 Molybdenum Cofactor Synthesis C FIM01_RS08805 PF02391 MoaE protein FIM01_RS08810 PF00994 Probable molybdopterin binding domain FIM01_RS08810 PF01967 MoaC family FIM01_RS08815 PF00994 Probable molybdopterin binding domain FIM01_RS08815 PF03454 MoeA C-terminal region (domain IV) FIM01_RS08815 PF03453 MoeA N-terminal region (domain I and II) FIM01_RS08820 PF01638 HxlR-like helix-turn-helix FIM01_RS08825 PF00155 Aminotransferase class I and II FIM01_RS08825 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS08830 PF00892 EamA-like transporter family FIM01_RS08850 PF02635 DsrE/DsrF-like family FIM01_RS08855 PF16363 GDP-mannose 4,6 dehydratase FIM01_RS08860 PF10415 Fumarase C C-terminus FIM01_RS08860 PF00206 Lyase FIM01_RS08885 PF01266 FAD dependent oxidoreductase FIM01_RS08895 PF02542 YgbB family FIM01_RS08905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIM01_RS08905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIM01_RS08910 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS08915 PF00158 Sigma-54 interaction domain FIM01_RS08915 PF00072 Response regulator receiver domain FIM01_RS08915 PF02954 Bacterial regulatory protein, Fis family FIM01_RS08920 PF00989 PAS fold FIM01_RS08920 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS08930 PF00919 Uncharacterized protein family UPF0004 FIM01_RS08930 PF18693 TRAM domain FIM01_RS08930 PF04055 Radical SAM superfamily FIM01_RS08935 PF00696 Amino acid kinase family FIM01_RS08940 PF01765 Ribosome recycling factor FIM01_RS08945 PF01255 Putative undecaprenyl diphosphate synthase FIM01_RS08955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FIM01_RS08955 PF13288 DXP reductoisomerase C-terminal domain FIM01_RS08955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FIM01_RS08960 PF13180 PDZ domain FIM01_RS08960 PF17820 PDZ domain FIM01_RS08960 PF02163 Peptidase family M50 FIM01_RS08965 PF01103 Surface antigen FIM01_RS08965 PF07244 Surface antigen variable number repeat FIM01_RS08975 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS08975 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FIM01_RS08980 PF07977 FabA-like domain FIM01_RS08985 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS08985 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FIM01_RS09000 PF02631 RecX family FIM01_RS09005 PF00154 recA bacterial DNA recombination protein FIM01_RS09010 PF01479 S4 domain FIM01_RS09015 PF13419 Haloacid dehalogenase-like hydrolase FIM01_RS09040 PF01037 Lrp/AsnC ligand binding domain FIM01_RS09045 PF00266 Aminotransferase class-V FIM01_RS09050 PF00324 Amino acid permease FIM01_RS09060 PF05922 Peptidase inhibitor I9 FIM01_RS09060 PF00082 Subtilase family FIM01_RS09065 PF01740 STAS domain FIM01_RS09065 PF00916 Sulfate permease family FIM01_RS09070 PF02586 SOS response associated peptidase (SRAP) FIM01_RS09075 PF07995 Glucose / Sorbosone dehydrogenase FIM01_RS09085 PF03707 Bacterial signalling protein N terminal repeat FIM01_RS09085 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS09085 PF00563 EAL domain FIM01_RS09105 PF02378 Phosphotransferase system, EIIC FIM01_RS09105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIM01_RS09110 PF00294 pfkB family carbohydrate kinase FIM01_RS09115 PF00391 PEP-utilising enzyme, mobile domain FIM01_RS09115 PF00381 PTS HPr component phosphorylation site FIM01_RS09115 PF05524 PEP-utilising enzyme, N-terminal FIM01_RS09115 PF02896 PEP-utilising enzyme, TIM barrel domain FIM01_RS09115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIM01_RS09140 PF05525 Branched-chain amino acid transport protein FIM01_RS09150 PF00557 Metallopeptidase family M24 FIM01_RS09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS09155 PF03466 LysR substrate binding domain FIM01_RS09165 PF00462 Glutaredoxin FIM01_RS09170 PF00202 Aminotransferase class-III FIM01_RS09175 PF00478 IMP dehydrogenase / GMP reductase domain FIM01_RS09175 PF00571 CBS domain FIM01_RS09200 PF00448 SRP54-type protein, GTPase domain FIM01_RS09200 PF02881 SRP54-type protein, helical bundle domain FIM01_RS09210 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FIM01_RS09220 PF08173 Membrane bound YbgT-like protein FIM01_RS09225 PF02322 Cytochrome bd terminal oxidase subunit II FIM01_RS09230 PF01654 Cytochrome bd terminal oxidase subunit I FIM01_RS09240 PF13737 Transposase DDE domain FIM01_RS09245 PF07290 Protein of unknown function (DUF1449) FIM01_RS09255 PF00294 pfkB family carbohydrate kinase FIM01_RS09260 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS09260 PF00593 TonB dependent receptor FIM01_RS09265 PF05193 Peptidase M16 inactive domain FIM01_RS09265 PF08367 Peptidase M16C associated FIM01_RS09265 PF00675 Insulinase (Peptidase family M16) FIM01_RS09270 PF02253 Phospholipase A1 FIM01_RS09275 PF02386 Cation transport protein FIM01_RS09280 PF02080 TrkA-C domain FIM01_RS09280 PF02254 TrkA-N domain FIM01_RS09285 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS09285 PF00585 C-terminal regulatory domain of Threonine dehydratase FIM01_RS09290 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FIM01_RS09305 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIM01_RS09305 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIM01_RS09315 PF02617 ATP-dependent Clp protease adaptor protein ClpS FIM01_RS09320 PF00004 ATPase family associated with various cellular activities (AAA) FIM01_RS09320 PF07724 AAA domain (Cdc48 subfamily) FIM01_RS09320 PF17871 AAA lid domain FIM01_RS09320 PF02861 Clp amino terminal domain, pathogenicity island component FIM01_RS09320 PF10431 C-terminal, D2-small domain, of ClpB protein FIM01_RS09325 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FIM01_RS09330 PF00793 DAHP synthetase I family FIM01_RS09345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIM01_RS09345 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS09375 PF00117 Glutamine amidotransferase class-I FIM01_RS09375 PF06418 CTP synthase N-terminus FIM01_RS09380 PF00793 DAHP synthetase I family FIM01_RS09385 PF03952 Enolase, N-terminal domain FIM01_RS09385 PF00113 Enolase, C-terminal TIM barrel domain FIM01_RS09390 PF04239 Protein of unknown function (DUF421) FIM01_RS09395 PF04977 Septum formation initiator FIM01_RS09400 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FIM01_RS09405 PF01144 Coenzyme A transferase FIM01_RS09410 PF01144 Coenzyme A transferase FIM01_RS09415 PF02803 Thiolase, C-terminal domain FIM01_RS09415 PF00108 Thiolase, N-terminal domain FIM01_RS09420 PF00206 Lyase FIM01_RS09420 PF10397 Adenylosuccinate lyase C-terminus FIM01_RS09425 PF00561 alpha/beta hydrolase fold FIM01_RS09430 PF07690 Major Facilitator Superfamily FIM01_RS09435 PF02627 Carboxymuconolactone decarboxylase family FIM01_RS09440 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FIM01_RS09440 PF00775 Dioxygenase FIM01_RS09445 PF00775 Dioxygenase FIM01_RS09450 PF01487 Type I 3-dehydroquinase FIM01_RS09455 PF05048 Periplasmic copper-binding protein (NosD) FIM01_RS09460 PF04966 Carbohydrate-selective porin, OprB family FIM01_RS09465 PF01011 PQQ enzyme repeat FIM01_RS09465 PF13360 PQQ-like domain FIM01_RS09475 PF04143 Sulphur transport FIM01_RS09485 PF00753 Metallo-beta-lactamase superfamily FIM01_RS09490 PF09339 IclR helix-turn-helix domain FIM01_RS09490 PF01614 Bacterial transcriptional regulator FIM01_RS09495 PF03466 LysR substrate binding domain FIM01_RS09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS09500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS09500 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS09500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS09515 PF00106 short chain dehydrogenase FIM01_RS09525 PF07690 Major Facilitator Superfamily FIM01_RS09535 PF01425 Amidase FIM01_RS09540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS09555 PF00355 Rieske [2Fe-2S] domain FIM01_RS09555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FIM01_RS09570 PF00175 Oxidoreductase NAD-binding domain FIM01_RS09570 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS09575 PF01613 Flavin reductase like domain FIM01_RS09580 PF02311 AraC-like ligand binding domain FIM01_RS09580 PF12833 Helix-turn-helix domain FIM01_RS09585 PF01179 Copper amine oxidase, enzyme domain FIM01_RS09585 PF02728 Copper amine oxidase, N3 domain FIM01_RS09585 PF02727 Copper amine oxidase, N2 domain FIM01_RS09585 PF07833 Copper amine oxidase N-terminal domain FIM01_RS09595 PF00171 Aldehyde dehydrogenase family FIM01_RS09600 PF01804 Penicillin amidase FIM01_RS09605 PF12146 Serine aminopeptidase, S33 FIM01_RS09610 PF00108 Thiolase, N-terminal domain FIM01_RS09610 PF02803 Thiolase, C-terminal domain FIM01_RS09620 PF01144 Coenzyme A transferase FIM01_RS09625 PF01144 Coenzyme A transferase FIM01_RS09630 PF04444 Catechol dioxygenase N terminus FIM01_RS09630 PF00775 Dioxygenase FIM01_RS09635 PF02426 Muconolactone delta-isomerase FIM01_RS09640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIM01_RS09640 PF13378 Enolase C-terminal domain-like FIM01_RS09645 PF03466 LysR substrate binding domain FIM01_RS09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS09655 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS09655 PF07729 FCD domain FIM01_RS09660 PF00920 Dehydratase family FIM01_RS09665 PF07690 Major Facilitator Superfamily FIM01_RS09675 PF00171 Aldehyde dehydrogenase family FIM01_RS09685 PF00561 alpha/beta hydrolase fold FIM01_RS09690 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS09690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIM01_RS09695 PF00106 short chain dehydrogenase FIM01_RS09705 PF09278 MerR, DNA binding FIM01_RS09705 PF00376 MerR family regulatory protein FIM01_RS09715 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS09725 PF12706 Beta-lactamase superfamily domain FIM01_RS09730 PF08359 YsiA-like protein, C-terminal region FIM01_RS09730 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS09735 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIM01_RS09735 PF12833 Helix-turn-helix domain FIM01_RS09740 PF00106 short chain dehydrogenase FIM01_RS09745 PF06314 Acetoacetate decarboxylase (ADC) FIM01_RS09755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIM01_RS09760 PF07995 Glucose / Sorbosone dehydrogenase FIM01_RS09775 PF00857 Isochorismatase family FIM01_RS09780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS09780 PF03466 LysR substrate binding domain FIM01_RS09785 PF07995 Glucose / Sorbosone dehydrogenase FIM01_RS09790 PF00999 Sodium/hydrogen exchanger family FIM01_RS09790 PF02254 TrkA-N domain FIM01_RS09800 PF01546 Peptidase family M20/M25/M40 FIM01_RS09800 PF07687 Peptidase dimerisation domain FIM01_RS09850 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) FIM01_RS09855 PF07690 Major Facilitator Superfamily FIM01_RS09860 PF04909 Amidohydrolase FIM01_RS09870 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS09870 PF07702 UTRA domain FIM01_RS09875 PF08450 SMP-30/Gluconolactonase/LRE-like region FIM01_RS09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS09885 PF03466 LysR substrate binding domain FIM01_RS09900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIM01_RS09900 PF00529 HlyD membrane-fusion protein of T1SS FIM01_RS09915 PF00171 Aldehyde dehydrogenase family FIM01_RS09920 PF00920 Dehydratase family FIM01_RS09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS09930 PF03466 LysR substrate binding domain FIM01_RS09935 PF01370 NAD dependent epimerase/dehydratase family FIM01_RS09940 PF07690 Major Facilitator Superfamily FIM01_RS09945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIM01_RS09945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIM01_RS09960 PF14572 Phosphoribosyl synthetase-associated domain FIM01_RS09960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FIM01_RS09965 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FIM01_RS09980 PF00196 Bacterial regulatory proteins, luxR family FIM01_RS09980 PF03472 Autoinducer binding domain FIM01_RS09985 PF01425 Amidase FIM01_RS09990 PF13533 Biotin-lipoyl like FIM01_RS09995 PF07690 Major Facilitator Superfamily FIM01_RS10020 PF01975 Survival protein SurE FIM01_RS10030 PF02824 TGS domain FIM01_RS10030 PF04607 Region found in RelA / SpoT proteins FIM01_RS10030 PF13291 ACT domain FIM01_RS10035 PF04851 Type III restriction enzyme, res subunit FIM01_RS10035 PF00271 Helicase conserved C-terminal domain FIM01_RS10035 PF02151 UvrB/uvrC motif FIM01_RS10035 PF12344 Ultra-violet resistance protein B FIM01_RS10035 PF17757 UvrB interaction domain FIM01_RS10070 PF13673 Acetyltransferase (GNAT) domain FIM01_RS10075 PF12146 Serine aminopeptidase, S33 FIM01_RS10080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS10080 PF03466 LysR substrate binding domain FIM01_RS10095 PF12146 Serine aminopeptidase, S33 FIM01_RS10100 PF12833 Helix-turn-helix domain FIM01_RS10100 PF02311 AraC-like ligand binding domain FIM01_RS10110 PF00672 HAMP domain FIM01_RS10110 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS10110 PF16527 Two-component sensor protein CpxA, periplasmic domain FIM01_RS10110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS10115 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS10115 PF00072 Response regulator receiver domain FIM01_RS10120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIM01_RS10120 PF00529 HlyD membrane-fusion protein of T1SS FIM01_RS10125 PF00873 AcrB/AcrD/AcrF family FIM01_RS10130 PF02321 Outer membrane efflux protein FIM01_RS10135 PF12146 Serine aminopeptidase, S33 FIM01_RS10140 PF00743 Flavin-binding monooxygenase-like FIM01_RS10150 PF01266 FAD dependent oxidoreductase FIM01_RS10420 PF16970 Type-1 fimbrial protein, A FIM01_RS10425 PF02753 Pili assembly chaperone PapD, C-terminal domain FIM01_RS10425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FIM01_RS10430 PF13953 PapC C-terminal domain FIM01_RS10430 PF13954 PapC N-terminal domain FIM01_RS10430 PF00577 Outer membrane usher protein FIM01_RS10445 PF00107 Zinc-binding dehydrogenase FIM01_RS10445 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS10455 PF00199 Catalase FIM01_RS10470 PF13091 PLD-like domain FIM01_RS10490 PF01244 Membrane dipeptidase (Peptidase family M19) FIM01_RS10495 PF04055 Radical SAM superfamily FIM01_RS10495 PF13186 Iron-sulfur cluster-binding domain FIM01_RS10500 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FIM01_RS10505 PF03070 TENA/THI-4/PQQC family FIM01_RS10510 PF12706 Beta-lactamase superfamily domain FIM01_RS10515 PF08042 PqqA family FIM01_RS10520 PF13089 Polyphosphate kinase N-terminal domain FIM01_RS10520 PF13090 Polyphosphate kinase C-terminal domain 2 FIM01_RS10520 PF17941 Polyphosphate kinase C-terminal domain 1 FIM01_RS10520 PF02503 Polyphosphate kinase middle domain FIM01_RS10525 PF00149 Calcineurin-like phosphoesterase FIM01_RS10535 PF00550 Phosphopantetheine attachment site FIM01_RS10535 PF00857 Isochorismatase family FIM01_RS10540 PF00106 short chain dehydrogenase FIM01_RS10545 PF00005 ABC transporter FIM01_RS10545 PF03459 TOBE domain FIM01_RS10550 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS10560 PF03459 TOBE domain FIM01_RS10565 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FIM01_RS10565 PF00355 Rieske [2Fe-2S] domain FIM01_RS10570 PF00866 Ring hydroxylating beta subunit FIM01_RS10575 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS10575 PF00970 Oxidoreductase FAD-binding domain FIM01_RS10575 PF00175 Oxidoreductase NAD-binding domain FIM01_RS10585 PF14525 AraC-binding-like domain FIM01_RS10585 PF12833 Helix-turn-helix domain FIM01_RS10595 PF01613 Flavin reductase like domain FIM01_RS10610 PF01738 Dienelactone hydrolase family FIM01_RS10615 PF07690 Major Facilitator Superfamily FIM01_RS10620 PF12833 Helix-turn-helix domain FIM01_RS10620 PF06719 AraC-type transcriptional regulator N-terminus FIM01_RS10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS10640 PF03466 LysR substrate binding domain FIM01_RS10645 PF01144 Coenzyme A transferase FIM01_RS10650 PF01144 Coenzyme A transferase FIM01_RS10655 PF02667 Short chain fatty acid transporter FIM01_RS10660 PF00108 Thiolase, N-terminal domain FIM01_RS10660 PF02803 Thiolase, C-terminal domain FIM01_RS10665 PF03466 LysR substrate binding domain FIM01_RS10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS10670 PF03466 LysR substrate binding domain FIM01_RS10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS10685 PF10415 Fumarase C C-terminus FIM01_RS10685 PF00206 Lyase FIM01_RS10690 PF00593 TonB dependent receptor FIM01_RS10690 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS10695 PF00083 Sugar (and other) transporter FIM01_RS10710 PF00005 ABC transporter FIM01_RS10715 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS10720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FIM01_RS10735 PF07702 UTRA domain FIM01_RS10735 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS10745 PF02525 Flavodoxin-like fold FIM01_RS10750 PF01638 HxlR-like helix-turn-helix FIM01_RS10755 PF06445 GyrI-like small molecule binding domain FIM01_RS10755 PF12833 Helix-turn-helix domain FIM01_RS10770 PF01925 Sulfite exporter TauE/SafE FIM01_RS10775 PF04273 Putative phosphatase (DUF442) FIM01_RS10775 PF00753 Metallo-beta-lactamase superfamily FIM01_RS10780 PF04273 Putative phosphatase (DUF442) FIM01_RS10780 PF00753 Metallo-beta-lactamase superfamily FIM01_RS10785 PF02954 Bacterial regulatory protein, Fis family FIM01_RS10785 PF00158 Sigma-54 interaction domain FIM01_RS10785 PF00072 Response regulator receiver domain FIM01_RS10790 PF01062 Bestrophin, RFP-TM, chloride channel FIM01_RS10795 PF00107 Zinc-binding dehydrogenase FIM01_RS10795 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS10800 PF00106 short chain dehydrogenase FIM01_RS10805 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS10805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIM01_RS10810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIM01_RS10810 PF00364 Biotin-requiring enzyme FIM01_RS10810 PF02817 e3 binding domain FIM01_RS10815 PF02779 Transketolase, pyrimidine binding domain FIM01_RS10815 PF02780 Transketolase, C-terminal domain FIM01_RS10820 PF00676 Dehydrogenase E1 component FIM01_RS10825 PF04055 Radical SAM superfamily FIM01_RS10840 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS10840 PF08448 PAS fold FIM01_RS10845 PF01264 Chorismate synthase FIM01_RS10850 PF05175 Methyltransferase small domain FIM01_RS10855 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS10865 PF17862 AAA+ lid domain FIM01_RS10865 PF01434 Peptidase family M41 FIM01_RS10865 PF00004 ATPase family associated with various cellular activities (AAA) FIM01_RS10875 PF05166 YcgL domain FIM01_RS10895 PF00570 HRDC domain FIM01_RS10895 PF01612 3'-5' exonuclease FIM01_RS10900 PF02132 RecR protein FIM01_RS10900 PF13662 Toprim domain FIM01_RS10905 PF02575 YbaB/EbfC DNA-binding family FIM01_RS10915 PF01053 Cys/Met metabolism PLP-dependent enzyme FIM01_RS10920 PF00561 alpha/beta hydrolase fold FIM01_RS10925 PF08241 Methyltransferase domain FIM01_RS10955 PF01230 HIT domain FIM01_RS10980 PF02684 Lipid-A-disaccharide synthetase FIM01_RS10985 PF00593 TonB dependent receptor FIM01_RS10985 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS11005 PF01925 Sulfite exporter TauE/SafE FIM01_RS11010 PF00793 DAHP synthetase I family FIM01_RS11015 PF02654 Cobalamin-5-phosphate synthase FIM01_RS11025 PF00300 Histidine phosphatase superfamily (branch 1) FIM01_RS11030 PF02277 Phosphoribosyltransferase FIM01_RS11035 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FIM01_RS11045 PF13419 Haloacid dehalogenase-like hydrolase FIM01_RS11070 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS11070 PF00593 TonB dependent receptor FIM01_RS11075 PF03737 Aldolase/RraA FIM01_RS11085 PF06276 Ferric iron reductase FhuF-like transporter FIM01_RS11085 PF04183 IucA / IucC family FIM01_RS11090 PF06276 Ferric iron reductase FhuF-like transporter FIM01_RS11090 PF04183 IucA / IucC family FIM01_RS11095 PF07690 Major Facilitator Superfamily FIM01_RS11100 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FIM01_RS11105 PF06276 Ferric iron reductase FhuF-like transporter FIM01_RS11105 PF04183 IucA / IucC family FIM01_RS11110 PF04073 Aminoacyl-tRNA editing domain FIM01_RS11120 PF03109 ABC1 family FIM01_RS11125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS11125 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS11125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS11130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS11130 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS11130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS11135 PF00487 Fatty acid desaturase FIM01_RS11140 PF12833 Helix-turn-helix domain FIM01_RS11140 PF12852 Cupin FIM01_RS11145 PF09312 SurA N-terminal domain FIM01_RS11145 PF00639 PPIC-type PPIASE domain FIM01_RS11150 PF00216 Bacterial DNA-binding protein FIM01_RS11165 PF02082 Transcriptional regulator FIM01_RS11170 PF00266 Aminotransferase class-V FIM01_RS11175 PF01592 NifU-like N terminal domain FIM01_RS11180 PF01521 Iron-sulphur cluster biosynthesis FIM01_RS11185 PF00226 DnaJ domain FIM01_RS11185 PF07743 HSCB C-terminal oligomerisation domain FIM01_RS11190 PF00012 Hsp70 protein FIM01_RS11195 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS11200 PF00211 Adenylate and Guanylate cyclase catalytic domain FIM01_RS11210 PF03461 TRCF domain FIM01_RS11210 PF17757 UvrB interaction domain FIM01_RS11210 PF00271 Helicase conserved C-terminal domain FIM01_RS11210 PF00270 DEAD/DEAH box helicase FIM01_RS11210 PF02559 CarD-like/TRCF domain FIM01_RS11230 PF03737 Aldolase/RraA FIM01_RS11235 PF13460 NAD(P)H-binding FIM01_RS11240 PF01649 Ribosomal protein S20 FIM01_RS11250 PF00459 Inositol monophosphatase family FIM01_RS11265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIM01_RS11265 PF00005 ABC transporter FIM01_RS11270 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS11275 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS11280 PF01432 Peptidase family M3 FIM01_RS11295 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS11295 PF00593 TonB dependent receptor FIM01_RS11300 PF03544 Gram-negative bacterial TonB protein C-terminal FIM01_RS11305 PF01618 MotA/TolQ/ExbB proton channel family FIM01_RS11310 PF02472 Biopolymer transport protein ExbD/TolR FIM01_RS11315 PF02472 Biopolymer transport protein ExbD/TolR FIM01_RS11325 PF01274 Malate synthase FIM01_RS11330 PF03969 AFG1-like ATPase FIM01_RS11340 PF00743 Flavin-binding monooxygenase-like FIM01_RS11350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FIM01_RS11360 PF00216 Bacterial DNA-binding protein FIM01_RS11365 PF00575 S1 RNA binding domain FIM01_RS11370 PF02224 Cytidylate kinase FIM01_RS11380 PF14437 MafB19-like deaminase FIM01_RS11390 PF03167 Uracil DNA glycosylase superfamily FIM01_RS11400 PF03934 Type II secretion system (T2SS), protein K FIM01_RS11405 PF11612 Type II secretion system (T2SS), protein J FIM01_RS11405 PF07963 Prokaryotic N-terminal methylation motif FIM01_RS11410 PF02501 Type II secretion system (T2SS), protein I FIM01_RS11410 PF07963 Prokaryotic N-terminal methylation motif FIM01_RS11425 PF01026 TatD related DNase FIM01_RS11435 PF09115 DNA polymerase III, delta subunit, C terminal FIM01_RS11440 PF02348 Cytidylyltransferase FIM01_RS11445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FIM01_RS11450 PF00005 ABC transporter FIM01_RS11450 PF00664 ABC transporter transmembrane region FIM01_RS11460 PF01618 MotA/TolQ/ExbB proton channel family FIM01_RS11465 PF02195 ParB-like nuclease domain FIM01_RS11465 PF17762 HTH domain found in ParB protein FIM01_RS11470 PF13614 AAA domain FIM01_RS11475 PF02527 rRNA small subunit methyltransferase G FIM01_RS11480 PF00483 Nucleotidyl transferase FIM01_RS11485 PF01636 Phosphotransferase enzyme family FIM01_RS11490 PF04453 LPS transport system D FIM01_RS11490 PF03968 OstA-like protein FIM01_RS11495 PF00639 PPIC-type PPIASE domain FIM01_RS11495 PF09312 SurA N-terminal domain FIM01_RS11500 PF01116 Fructose-bisphosphate aldolase class-II FIM01_RS11510 PF00162 Phosphoglycerate kinase FIM01_RS11520 PF02545 Maf-like protein FIM01_RS11525 PF08007 Cupin superfamily protein FIM01_RS11540 PF00375 Sodium:dicarboxylate symporter family FIM01_RS11545 PF06912 Protein of unknown function (DUF1275) FIM01_RS11550 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FIM01_RS11555 PF00664 ABC transporter transmembrane region FIM01_RS11555 PF00005 ABC transporter FIM01_RS11565 PF12833 Helix-turn-helix domain FIM01_RS11565 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIM01_RS11570 PF01597 Glycine cleavage H-protein FIM01_RS11575 PF02146 Sir2 family FIM01_RS11580 PF00474 Sodium:solute symporter family FIM01_RS11585 PF01037 Lrp/AsnC ligand binding domain FIM01_RS11590 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FIM01_RS11590 PF14850 DNA-binding domain of Proline dehydrogenase FIM01_RS11590 PF01619 Proline dehydrogenase FIM01_RS11590 PF00171 Aldehyde dehydrogenase family FIM01_RS11595 PF04229 GrpB protein FIM01_RS11600 PF05958 tRNA (Uracil-5-)-methyltransferase FIM01_RS11610 PF09992 Phosphodiester glycosidase FIM01_RS11620 PF04264 YceI-like domain FIM01_RS11630 PF02779 Transketolase, pyrimidine binding domain FIM01_RS11630 PF02780 Transketolase, C-terminal domain FIM01_RS11630 PF00456 Transketolase, thiamine diphosphate binding domain FIM01_RS11635 PF02772 S-adenosylmethionine synthetase, central domain FIM01_RS11635 PF00438 S-adenosylmethionine synthetase, N-terminal domain FIM01_RS11635 PF02773 S-adenosylmethionine synthetase, C-terminal domain FIM01_RS11655 PF00905 Penicillin binding protein transpeptidase domain FIM01_RS11670 PF02075 Crossover junction endodeoxyribonuclease RuvC FIM01_RS11675 PF03853 YjeF-related protein N-terminus FIM01_RS11675 PF01256 Carbohydrate kinase FIM01_RS11680 PF08331 Domain of unknown function (DUF1730) FIM01_RS11685 PF04055 Radical SAM superfamily FIM01_RS11685 PF06968 Biotin and Thiamin Synthesis associated domain FIM01_RS11700 PF16970 Type-1 fimbrial protein, A FIM01_RS11705 PF02753 Pili assembly chaperone PapD, C-terminal domain FIM01_RS11705 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FIM01_RS11710 PF13954 PapC N-terminal domain FIM01_RS11710 PF13953 PapC C-terminal domain FIM01_RS11710 PF00577 Outer membrane usher protein FIM01_RS11735 PF00892 EamA-like transporter family FIM01_RS11745 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FIM01_RS11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS11755 PF03466 LysR substrate binding domain FIM01_RS11775 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS11785 PF01709 Transcriptional regulator FIM01_RS11790 PF01037 Lrp/AsnC ligand binding domain FIM01_RS11800 PF00005 ABC transporter FIM01_RS11805 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS11810 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS11825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS11825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS11835 PF00296 Luciferase-like monooxygenase FIM01_RS11840 PF03180 NLPA lipoprotein FIM01_RS11845 PF03180 NLPA lipoprotein FIM01_RS11850 PF00005 ABC transporter FIM01_RS11850 PF09383 NIL domain FIM01_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS11860 PF01926 50S ribosome-binding GTPase FIM01_RS11860 PF06071 Protein of unknown function (DUF933) FIM01_RS11885 PF03591 AzlC protein FIM01_RS11890 PF05437 Branched-chain amino acid transport protein (AzlD) FIM01_RS11900 PF02222 ATP-grasp domain FIM01_RS11905 PF08335 GlnD PII-uridylyltransferase FIM01_RS11905 PF01909 Nucleotidyltransferase domain FIM01_RS11905 PF01966 HD domain FIM01_RS11910 PF00155 Aminotransferase class I and II FIM01_RS11920 PF12833 Helix-turn-helix domain FIM01_RS11920 PF12852 Cupin FIM01_RS11925 PF00255 Glutathione peroxidase FIM01_RS11930 PF01641 SelR domain FIM01_RS11935 PF00155 Aminotransferase class I and II FIM01_RS11940 PF00375 Sodium:dicarboxylate symporter family FIM01_RS11945 PF17763 Glutaminase/Asparaginase C-terminal domain FIM01_RS11945 PF00710 Asparaginase, N-terminal FIM01_RS11950 PF01336 OB-fold nucleic acid binding domain FIM01_RS11950 PF02811 PHP domain FIM01_RS11950 PF14579 Helix-hairpin-helix motif FIM01_RS11950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIM01_RS11950 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIM01_RS11955 PF00588 SpoU rRNA Methylase family FIM01_RS11960 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS11975 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS11975 PF13192 Thioredoxin domain FIM01_RS11990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS11990 PF03466 LysR substrate binding domain FIM01_RS11995 PF01758 Sodium Bile acid symporter family FIM01_RS12000 PF01022 Bacterial regulatory protein, arsR family FIM01_RS12005 PF03960 ArsC family FIM01_RS12015 PF01979 Amidohydrolase family FIM01_RS12015 PF13382 Adenine deaminase C-terminal domain FIM01_RS12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12025 PF03466 LysR substrate binding domain FIM01_RS12035 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FIM01_RS12040 PF01177 Asp/Glu/Hydantoin racemase FIM01_RS12045 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FIM01_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS12055 PF00005 ABC transporter FIM01_RS12060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FIM01_RS12070 PF00083 Sugar (and other) transporter FIM01_RS12075 PF00296 Luciferase-like monooxygenase FIM01_RS12095 PF01654 Cytochrome bd terminal oxidase subunit I FIM01_RS12100 PF02322 Cytochrome bd terminal oxidase subunit II FIM01_RS12110 PF00155 Aminotransferase class I and II FIM01_RS12110 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS12115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12115 PF03466 LysR substrate binding domain FIM01_RS12130 PF00698 Acyl transferase domain FIM01_RS12135 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FIM01_RS12145 PF01039 Carboxyl transferase domain FIM01_RS12150 PF06857 Malonate decarboxylase delta subunit (MdcD) FIM01_RS12155 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FIM01_RS12160 PF16957 Malonate decarboxylase, alpha subunit, transporter FIM01_RS12165 PF07690 Major Facilitator Superfamily FIM01_RS12180 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS12185 PF04172 LrgB-like family FIM01_RS12190 PF03788 LrgA family FIM01_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12195 PF03466 LysR substrate binding domain FIM01_RS12200 PF14834 Glutathione S-transferase, C-terminal domain FIM01_RS12200 PF02798 Glutathione S-transferase, N-terminal domain FIM01_RS12205 PF02798 Glutathione S-transferase, N-terminal domain FIM01_RS12210 PF03466 LysR substrate binding domain FIM01_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12220 PF00581 Rhodanese-like domain FIM01_RS12225 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS12235 PF00266 Aminotransferase class-V FIM01_RS12240 PF01810 LysE type translocator FIM01_RS12245 PF03466 LysR substrate binding domain FIM01_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12250 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIM01_RS12255 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIM01_RS12260 PF00005 ABC transporter FIM01_RS12265 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS12270 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS12285 PF00072 Response regulator receiver domain FIM01_RS12290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS12290 PF00072 Response regulator receiver domain FIM01_RS12290 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS12290 PF09308 LuxQ, periplasmic FIM01_RS12300 PF01037 Lrp/AsnC ligand binding domain FIM01_RS12300 PF13404 AsnC-type helix-turn-helix domain FIM01_RS12310 PF00717 Peptidase S24-like FIM01_RS12335 PF18011 C-terminal domain found in long catalases FIM01_RS12335 PF06628 Catalase-related immune-responsive FIM01_RS12335 PF00199 Catalase FIM01_RS12345 PF18146 Damage-inducible protein CinA KH domain FIM01_RS12345 PF02464 Competence-damaged protein FIM01_RS12345 PF00994 Probable molybdopterin binding domain FIM01_RS12375 PF03466 LysR substrate binding domain FIM01_RS12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12395 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS12395 PF00501 AMP-binding enzyme FIM01_RS12400 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS12405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS12405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS12405 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS12410 PF01039 Carboxyl transferase domain FIM01_RS12415 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS12420 PF02785 Biotin carboxylase C-terminal domain FIM01_RS12420 PF18140 Propionyl-coenzyme A carboxylase BT domain FIM01_RS12420 PF00289 Biotin carboxylase, N-terminal domain FIM01_RS12420 PF00364 Biotin-requiring enzyme FIM01_RS12420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIM01_RS12425 PF00682 HMGL-like FIM01_RS12430 PF03466 LysR substrate binding domain FIM01_RS12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS12445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS12445 PF12806 Acetyl-CoA dehydrogenase C-terminal like FIM01_RS12445 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS12455 PF07690 Major Facilitator Superfamily FIM01_RS12465 PF01144 Coenzyme A transferase FIM01_RS12470 PF01144 Coenzyme A transferase FIM01_RS12475 PF07690 Major Facilitator Superfamily FIM01_RS12480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS12480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS12480 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS12485 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS12495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIM01_RS12495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIM01_RS12495 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FIM01_RS12500 PF02803 Thiolase, C-terminal domain FIM01_RS12500 PF00108 Thiolase, N-terminal domain FIM01_RS12505 PF09339 IclR helix-turn-helix domain FIM01_RS12510 PF07690 Major Facilitator Superfamily FIM01_RS12515 PF03060 Nitronate monooxygenase FIM01_RS12520 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS12525 PF09339 IclR helix-turn-helix domain FIM01_RS12530 PF02515 CoA-transferase family III FIM01_RS12535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS12535 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS12535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS12540 PF07690 Major Facilitator Superfamily FIM01_RS12545 PF13419 Haloacid dehalogenase-like hydrolase FIM01_RS12550 PF00266 Aminotransferase class-V FIM01_RS12555 PF01266 FAD dependent oxidoreductase FIM01_RS12560 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS12565 PF00005 ABC transporter FIM01_RS12565 PF08402 TOBE domain FIM01_RS12575 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS12575 PF07702 UTRA domain FIM01_RS12580 PF01494 FAD binding domain FIM01_RS12585 PF09339 IclR helix-turn-helix domain FIM01_RS12585 PF01614 Bacterial transcriptional regulator FIM01_RS12590 PF02525 Flavodoxin-like fold FIM01_RS12595 PF03466 LysR substrate binding domain FIM01_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12600 PF02627 Carboxymuconolactone decarboxylase family FIM01_RS12605 PF00171 Aldehyde dehydrogenase family FIM01_RS12615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FIM01_RS12625 PF00171 Aldehyde dehydrogenase family FIM01_RS12630 PF00296 Luciferase-like monooxygenase FIM01_RS12635 PF01613 Flavin reductase like domain FIM01_RS12640 PF12697 Alpha/beta hydrolase family FIM01_RS12660 PF01292 Prokaryotic cytochrome b561 FIM01_RS12665 PF00199 Catalase FIM01_RS12670 PF07690 Major Facilitator Superfamily FIM01_RS12675 PF00682 HMGL-like FIM01_RS12680 PF02515 CoA-transferase family III FIM01_RS12710 PF00313 'Cold-shock' DNA-binding domain FIM01_RS12750 PF13361 UvrD-like helicase C-terminal domain FIM01_RS12750 PF00580 UvrD/REP helicase N-terminal domain FIM01_RS12755 PF02463 RecF/RecN/SMC N terminal domain FIM01_RS12760 PF03061 Thioesterase superfamily FIM01_RS12765 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS12770 PF08223 PaaX-like protein C-terminal domain FIM01_RS12770 PF07848 PaaX-like protein FIM01_RS12775 PF14535 AMP-binding enzyme C-terminal domain FIM01_RS12775 PF00501 AMP-binding enzyme FIM01_RS12780 PF00108 Thiolase, N-terminal domain FIM01_RS12780 PF02803 Thiolase, C-terminal domain FIM01_RS12785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIM01_RS12785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIM01_RS12785 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FIM01_RS12790 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS12795 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS12800 PF00175 Oxidoreductase NAD-binding domain FIM01_RS12800 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS12800 PF00970 Oxidoreductase FAD-binding domain FIM01_RS12805 PF01883 Iron-sulfur cluster assembly protein FIM01_RS12810 PF05138 Phenylacetic acid catabolic protein FIM01_RS12815 PF06243 Phenylacetic acid degradation B FIM01_RS12820 PF05138 Phenylacetic acid catabolic protein FIM01_RS12825 PF01575 MaoC like domain FIM01_RS12825 PF00171 Aldehyde dehydrogenase family FIM01_RS12830 PF03315 Serine dehydratase beta chain FIM01_RS12830 PF03313 Serine dehydratase alpha chain FIM01_RS12835 PF13520 Amino acid permease FIM01_RS12840 PF00171 Aldehyde dehydrogenase family FIM01_RS12845 PF00083 Sugar (and other) transporter FIM01_RS12855 PF04324 BFD-like [2Fe-2S] binding domain FIM01_RS12855 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS12865 PF01266 FAD dependent oxidoreductase FIM01_RS12870 PF05544 Proline racemase FIM01_RS12875 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS12885 PF00701 Dihydrodipicolinate synthetase family FIM01_RS12900 PF00376 MerR family regulatory protein FIM01_RS12900 PF09278 MerR, DNA binding FIM01_RS12910 PF02677 Epoxyqueuosine reductase QueH FIM01_RS12925 PF07690 Major Facilitator Superfamily FIM01_RS12930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIM01_RS12940 PF03466 LysR substrate binding domain FIM01_RS12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS12960 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FIM01_RS12965 PF06812 ImpA, N-terminal, type VI secretion system FIM01_RS12970 PF10431 C-terminal, D2-small domain, of ClpB protein FIM01_RS12970 PF17871 AAA lid domain FIM01_RS12970 PF07724 AAA domain (Cdc48 subfamily) FIM01_RS12970 PF00004 ATPase family associated with various cellular activities (AAA) FIM01_RS12980 PF00691 OmpA family FIM01_RS12980 PF01389 OmpA-like transmembrane domain FIM01_RS12990 PF06744 Type VI secretion protein IcmF C-terminal FIM01_RS12990 PF06761 Intracellular multiplication and human macrophage-killing FIM01_RS12990 PF14331 ImcF-related N-terminal domain FIM01_RS13005 PF05947 Type VI secretion system, TssF FIM01_RS13020 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FIM01_RS13050 PF00005 ABC transporter FIM01_RS13055 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIM01_RS13060 PF01425 Amidase FIM01_RS13065 PF08753 NikR C terminal nickel binding domain FIM01_RS13065 PF01402 Ribbon-helix-helix protein, copG family FIM01_RS13075 PF01638 HxlR-like helix-turn-helix FIM01_RS13080 PF02525 Flavodoxin-like fold FIM01_RS13085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIM01_RS13085 PF02785 Biotin carboxylase C-terminal domain FIM01_RS13085 PF00289 Biotin carboxylase, N-terminal domain FIM01_RS13100 PF00107 Zinc-binding dehydrogenase FIM01_RS13100 PF13823 Alcohol dehydrogenase GroES-associated FIM01_RS13100 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS13110 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS13140 PF00654 Voltage gated chloride channel FIM01_RS13145 PF00364 Biotin-requiring enzyme FIM01_RS13145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIM01_RS13145 PF02785 Biotin carboxylase C-terminal domain FIM01_RS13145 PF00289 Biotin carboxylase, N-terminal domain FIM01_RS13155 PF07286 Protein of unknown function (DUF1445) FIM01_RS13160 PF03746 LamB/YcsF family FIM01_RS13165 PF01566 Natural resistance-associated macrophage protein FIM01_RS13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS13170 PF03466 LysR substrate binding domain FIM01_RS13190 PF03527 RHS protein FIM01_RS13190 PF05593 RHS Repeat FIM01_RS13205 PF05593 RHS Repeat FIM01_RS13205 PF03527 RHS protein FIM01_RS13210 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FIM01_RS13210 PF13296 Putative type VI secretion system Rhs element Vgr FIM01_RS13210 PF04717 Type VI secretion system, phage-baseplate injector FIM01_RS13240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIM01_RS13240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIM01_RS13260 PF07690 Major Facilitator Superfamily FIM01_RS13275 PF03279 Bacterial lipid A biosynthesis acyltransferase FIM01_RS13285 PF00892 EamA-like transporter family FIM01_RS13290 PF01037 Lrp/AsnC ligand binding domain FIM01_RS13295 PF00488 MutS domain V FIM01_RS13295 PF05188 MutS domain II FIM01_RS13295 PF05192 MutS domain III FIM01_RS13295 PF05190 MutS family domain IV FIM01_RS13295 PF01624 MutS domain I FIM01_RS13305 PF11953 Domain of unknown function (DUF3470) FIM01_RS13305 PF00037 4Fe-4S binding domain FIM01_RS13315 PF01596 O-methyltransferase FIM01_RS13325 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS13330 PF01205 Uncharacterized protein family UPF0029 FIM01_RS13340 PF00664 ABC transporter transmembrane region FIM01_RS13340 PF00005 ABC transporter FIM01_RS13340 PF03412 Peptidase C39 family FIM01_RS13350 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIM01_RS13350 PF00005 ABC transporter FIM01_RS13355 PF03968 OstA-like protein FIM01_RS13370 PF00571 CBS domain FIM01_RS13370 PF01380 SIS domain FIM01_RS13375 PF01406 tRNA synthetases class I (C) catalytic domain FIM01_RS13375 PF09190 DALR domain FIM01_RS13425 PF12708 Pectate lyase superfamily protein FIM01_RS13425 PF13229 Right handed beta helix region FIM01_RS13450 PF13737 Transposase DDE domain FIM01_RS13535 PF01638 HxlR-like helix-turn-helix FIM01_RS13540 PF07690 Major Facilitator Superfamily FIM01_RS13570 PF14748 Pyrroline-5-carboxylate reductase dimerisation FIM01_RS13570 PF03807 NADP oxidoreductase coenzyme F420-dependent FIM01_RS13580 PF00313 'Cold-shock' DNA-binding domain FIM01_RS13585 PF01810 LysE type translocator FIM01_RS13620 PF13742 OB-fold nucleic acid binding domain FIM01_RS13620 PF02601 Exonuclease VII, large subunit FIM01_RS13660 PF00376 MerR family regulatory protein FIM01_RS13660 PF09278 MerR, DNA binding FIM01_RS13665 PF00403 Heavy-metal-associated domain FIM01_RS13675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS13675 PF03466 LysR substrate binding domain FIM01_RS13680 PF00355 Rieske [2Fe-2S] domain FIM01_RS13680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FIM01_RS13685 PF00866 Ring hydroxylating beta subunit FIM01_RS13690 PF00175 Oxidoreductase NAD-binding domain FIM01_RS13690 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS13690 PF00970 Oxidoreductase FAD-binding domain FIM01_RS13695 PF00106 short chain dehydrogenase FIM01_RS13700 PF03594 Benzoate membrane transport protein FIM01_RS13705 PF07690 Major Facilitator Superfamily FIM01_RS13715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FIM01_RS13715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FIM01_RS13720 PF00270 DEAD/DEAH box helicase FIM01_RS13720 PF00271 Helicase conserved C-terminal domain FIM01_RS13720 PF04408 Helicase associated domain (HA2) FIM01_RS13720 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FIM01_RS13720 PF11898 Domain of unknown function (DUF3418) FIM01_RS13725 PF00578 AhpC/TSA family FIM01_RS13725 PF10417 C-terminal domain of 1-Cys peroxiredoxin FIM01_RS13745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS13745 PF13192 Thioredoxin domain FIM01_RS13755 PF02798 Glutathione S-transferase, N-terminal domain FIM01_RS13755 PF00043 Glutathione S-transferase, C-terminal domain FIM01_RS13765 PF02390 Putative methyltransferase FIM01_RS13770 PF00043 Glutathione S-transferase, C-terminal domain FIM01_RS13770 PF13417 Glutathione S-transferase, N-terminal domain FIM01_RS13780 PF00691 OmpA family FIM01_RS13780 PF13488 Glycine zipper FIM01_RS13785 PF01979 Amidohydrolase family FIM01_RS13790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIM01_RS13790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIM01_RS13800 PF02926 THUMP domain FIM01_RS13800 PF01170 Putative RNA methylase family UPF0020 FIM01_RS13800 PF10672 S-adenosylmethionine-dependent methyltransferase FIM01_RS13815 PF17871 AAA lid domain FIM01_RS13815 PF00004 ATPase family associated with various cellular activities (AAA) FIM01_RS13815 PF07724 AAA domain (Cdc48 subfamily) FIM01_RS13815 PF02861 Clp amino terminal domain, pathogenicity island component FIM01_RS13815 PF10431 C-terminal, D2-small domain, of ClpB protein FIM01_RS13830 PF02566 OsmC-like protein FIM01_RS13835 PF13545 Crp-like helix-turn-helix domain FIM01_RS13835 PF00027 Cyclic nucleotide-binding domain FIM01_RS13840 PF00248 Aldo/keto reductase family FIM01_RS13855 PF00709 Adenylosuccinate synthetase FIM01_RS13860 PF13393 Histidyl-tRNA synthetase FIM01_RS13865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIM01_RS13865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIM01_RS13870 PF02272 DHHA1 domain FIM01_RS13870 PF01411 tRNA synthetases class II (A) FIM01_RS13870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIM01_RS13875 PF13840 ACT domain FIM01_RS13875 PF00696 Amino acid kinase family FIM01_RS13875 PF01842 ACT domain FIM01_RS13880 PF02599 Global regulator protein family FIM01_RS13885 PF01351 Ribonuclease HII FIM01_RS13895 PF01292 Prokaryotic cytochrome b561 FIM01_RS13900 PF00962 Adenosine/AMP deaminase FIM01_RS13905 PF00860 Permease family FIM01_RS13915 PF00743 Flavin-binding monooxygenase-like FIM01_RS13920 PF00106 short chain dehydrogenase FIM01_RS13930 PF02678 Pirin FIM01_RS13930 PF17954 Quercetinase C-terminal cupin domain FIM01_RS13935 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS13935 PF17932 Tetracyclin repressor-like, C-terminal domain FIM01_RS13945 PF00106 short chain dehydrogenase FIM01_RS13950 PF00743 Flavin-binding monooxygenase-like FIM01_RS13955 PF04072 Leucine carboxyl methyltransferase FIM01_RS13960 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIM01_RS13960 PF12833 Helix-turn-helix domain FIM01_RS13965 PF00743 Flavin-binding monooxygenase-like FIM01_RS13970 PF00106 short chain dehydrogenase FIM01_RS13975 PF07859 alpha/beta hydrolase fold FIM01_RS13980 PF05199 GMC oxidoreductase FIM01_RS13985 PF03573 outer membrane porin, OprD family FIM01_RS13990 PF07690 Major Facilitator Superfamily FIM01_RS13995 PF00355 Rieske [2Fe-2S] domain FIM01_RS14000 PF00175 Oxidoreductase NAD-binding domain FIM01_RS14000 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS14015 PF07690 Major Facilitator Superfamily FIM01_RS14020 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS14025 PF00171 Aldehyde dehydrogenase family FIM01_RS14035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS14035 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS14035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS14040 PF03573 outer membrane porin, OprD family FIM01_RS14055 PF07519 Tannase and feruloyl esterase FIM01_RS14060 PF07729 FCD domain FIM01_RS14060 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS14065 PF00171 Aldehyde dehydrogenase family FIM01_RS14070 PF00701 Dihydrodipicolinate synthetase family FIM01_RS14075 PF13378 Enolase C-terminal domain-like FIM01_RS14080 PF07690 Major Facilitator Superfamily FIM01_RS14085 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FIM01_RS14085 PF08666 SAF domain FIM01_RS14090 PF00892 EamA-like transporter family FIM01_RS14095 PF12833 Helix-turn-helix domain FIM01_RS14095 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIM01_RS14100 PF00171 Aldehyde dehydrogenase family FIM01_RS14120 PF00324 Amino acid permease FIM01_RS14125 PF04958 Arginine N-succinyltransferase beta subunit FIM01_RS14130 PF00202 Aminotransferase class-III FIM01_RS14140 PF00171 Aldehyde dehydrogenase family FIM01_RS14150 PF07729 FCD domain FIM01_RS14150 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS14160 PF00324 Amino acid permease FIM01_RS14165 PF01266 FAD dependent oxidoreductase FIM01_RS14170 PF00324 Amino acid permease FIM01_RS14210 PF05593 RHS Repeat FIM01_RS14210 PF03527 RHS protein FIM01_RS14220 PF13737 Transposase DDE domain FIM01_RS14245 PF03180 NLPA lipoprotein FIM01_RS14255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIM01_RS14255 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS14260 PF00764 Arginosuccinate synthase FIM01_RS14265 PF00360 Phytochrome region FIM01_RS14265 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS14265 PF01590 GAF domain FIM01_RS14265 PF00563 EAL domain FIM01_RS14270 PF01979 Amidohydrolase family FIM01_RS14275 PF00929 Exonuclease FIM01_RS14285 PF00593 TonB dependent receptor FIM01_RS14285 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS14325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIM01_RS14325 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS14330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIM01_RS14330 PF00005 ABC transporter FIM01_RS14335 PF12911 N-terminal TM domain of oligopeptide transport permease C FIM01_RS14335 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS14340 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS14345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIM01_RS14350 PF01476 LysM domain FIM01_RS14350 PF01476 LysM domain FIM01_RS14350 PF01464 Transglycosylase SLT domain FIM01_RS14350 PF01464 Transglycosylase SLT domain FIM01_RS14355 PF00929 Exonuclease FIM01_RS14365 PF09297 NADH pyrophosphatase zinc ribbon domain FIM01_RS14365 PF00293 NUDIX domain FIM01_RS14375 PF04972 BON domain FIM01_RS14380 PF02021 Uncharacterised protein family UPF0102 FIM01_RS14385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIM01_RS14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS14395 PF03466 LysR substrate binding domain FIM01_RS14400 PF01810 LysE type translocator FIM01_RS14410 PF13411 MerR HTH family regulatory protein FIM01_RS14420 PF01494 FAD binding domain FIM01_RS14425 PF01494 FAD binding domain FIM01_RS14430 PF05195 Aminopeptidase P, N-terminal domain FIM01_RS14430 PF00557 Metallopeptidase family M24 FIM01_RS14470 PF01812 5-formyltetrahydrofolate cyclo-ligase family FIM01_RS14480 PF02190 ATP-dependent protease La (LON) substrate-binding domain FIM01_RS14480 PF00004 ATPase family associated with various cellular activities (AAA) FIM01_RS14480 PF05362 Lon protease (S16) C-terminal proteolytic domain FIM01_RS14485 PF02590 Predicted SPOUT methyltransferase FIM01_RS14490 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FIM01_RS14500 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FIM01_RS14500 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FIM01_RS14505 PF04060 Putative Fe-S cluster FIM01_RS14510 PF10576 Iron-sulfur binding domain of endonuclease III FIM01_RS14510 PF00633 Helix-hairpin-helix motif FIM01_RS14510 PF00730 HhH-GPD superfamily base excision DNA repair protein FIM01_RS14520 PF05191 Adenylate kinase, active site lid FIM01_RS14535 PF03717 Penicillin-binding Protein dimerisation domain FIM01_RS14535 PF00905 Penicillin binding protein transpeptidase domain FIM01_RS14550 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIM01_RS14555 PF01730 UreF FIM01_RS14560 PF05194 UreE urease accessory protein, C-terminal domain FIM01_RS14560 PF02814 UreE urease accessory protein, N-terminal domain FIM01_RS14565 PF00449 Urease alpha-subunit, N-terminal domain FIM01_RS14565 PF01979 Amidohydrolase family FIM01_RS14570 PF00699 Urease beta subunit FIM01_RS14575 PF00547 Urease, gamma subunit FIM01_RS14580 PF01774 UreD urease accessory protein FIM01_RS14595 PF00463 Isocitrate lyase family FIM01_RS14600 PF03466 LysR substrate binding domain FIM01_RS14600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS14605 PF01595 Cyclin M transmembrane N-terminal domain FIM01_RS14605 PF03471 Transporter associated domain FIM01_RS14605 PF00571 CBS domain FIM01_RS14615 PF03600 Citrate transporter FIM01_RS14630 PF00009 Elongation factor Tu GTP binding domain FIM01_RS14635 PF01507 Phosphoadenosine phosphosulfate reductase family FIM01_RS14645 PF14052 Capsule assembly protein Wzi FIM01_RS14650 PF01336 OB-fold nucleic acid binding domain FIM01_RS14650 PF00152 tRNA synthetases class II (D, K and N) FIM01_RS14665 PF00301 Rubredoxin FIM01_RS14670 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS14670 PF18113 Rubredoxin binding C-terminal domain FIM01_RS14675 PF00561 alpha/beta hydrolase fold FIM01_RS14680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS14680 PF03466 LysR substrate binding domain FIM01_RS14695 PF13090 Polyphosphate kinase C-terminal domain 2 FIM01_RS14695 PF13089 Polyphosphate kinase N-terminal domain FIM01_RS14695 PF17941 Polyphosphate kinase C-terminal domain 1 FIM01_RS14695 PF02503 Polyphosphate kinase middle domain FIM01_RS14700 PF00912 Transglycosylase FIM01_RS14705 PF01694 Rhomboid family FIM01_RS14715 PF00005 ABC transporter FIM01_RS14720 PF13472 GDSL-like Lipase/Acylhydrolase family FIM01_RS14725 PF00484 Carbonic anhydrase FIM01_RS14730 PF00561 alpha/beta hydrolase fold FIM01_RS14740 PF00593 TonB dependent receptor FIM01_RS14740 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS14745 PF01521 Iron-sulphur cluster biosynthesis FIM01_RS14745 PF01106 NifU-like domain FIM01_RS14755 PF00884 Sulfatase FIM01_RS14760 PF03781 Sulfatase-modifying factor enzyme 1 FIM01_RS14775 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS14780 PF01384 Phosphate transporter family FIM01_RS14785 PF00809 Pterin binding enzyme FIM01_RS14785 PF02310 B12 binding domain FIM01_RS14785 PF02574 Homocysteine S-methyltransferase FIM01_RS14785 PF02965 Vitamin B12 dependent methionine synthase, activation domain FIM01_RS14785 PF02607 B12 binding domain FIM01_RS14790 PF02780 Transketolase, C-terminal domain FIM01_RS14790 PF02779 Transketolase, pyrimidine binding domain FIM01_RS14795 PF00456 Transketolase, thiamine diphosphate binding domain FIM01_RS14800 PF07690 Major Facilitator Superfamily FIM01_RS14810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS14810 PF03466 LysR substrate binding domain FIM01_RS14825 PF01263 Aldose 1-epimerase FIM01_RS14830 PF07690 Major Facilitator Superfamily FIM01_RS14835 PF12833 Helix-turn-helix domain FIM01_RS14835 PF02311 AraC-like ligand binding domain FIM01_RS14840 PF04960 Glutaminase FIM01_RS14845 PF01327 Polypeptide deformylase FIM01_RS14850 PF07690 Major Facilitator Superfamily FIM01_RS14860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIM01_RS14860 PF00205 Thiamine pyrophosphate enzyme, central domain FIM01_RS14860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIM01_RS14865 PF00171 Aldehyde dehydrogenase family FIM01_RS14870 PF03447 Homoserine dehydrogenase, NAD binding domain FIM01_RS14870 PF01958 Domain of unknown function DUF108 FIM01_RS14880 PF12697 Alpha/beta hydrolase family FIM01_RS14890 PF07690 Major Facilitator Superfamily FIM01_RS14895 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS14895 PF14759 Reductase C-terminal FIM01_RS14900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIM01_RS14910 PF00355 Rieske [2Fe-2S] domain FIM01_RS14920 PF00355 Rieske [2Fe-2S] domain FIM01_RS14925 PF09339 IclR helix-turn-helix domain FIM01_RS14925 PF01614 Bacterial transcriptional regulator FIM01_RS14940 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS14950 PF00535 Glycosyl transferase family 2 FIM01_RS14955 PF14883 Hypothetical glycosyl hydrolase family 13 FIM01_RS14955 PF01522 Polysaccharide deacetylase FIM01_RS14960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIM01_RS14965 PF07152 YaeQ protein FIM01_RS14970 PF00375 Sodium:dicarboxylate symporter family FIM01_RS14975 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIM01_RS14975 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIM01_RS14985 PF03061 Thioesterase superfamily FIM01_RS14995 PF02028 BCCT, betaine/carnitine/choline family transporter FIM01_RS15000 PF02028 BCCT, betaine/carnitine/choline family transporter FIM01_RS15005 PF13977 BetI-type transcriptional repressor, C-terminal FIM01_RS15005 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS15010 PF00171 Aldehyde dehydrogenase family FIM01_RS15015 PF05199 GMC oxidoreductase FIM01_RS15015 PF00732 GMC oxidoreductase FIM01_RS15020 PF06039 Malate:quinone oxidoreductase (Mqo) FIM01_RS15030 PF02574 Homocysteine S-methyltransferase FIM01_RS15035 PF13520 Amino acid permease FIM01_RS15060 PF01126 Heme oxygenase FIM01_RS15070 PF04575 Protein of unknown function (DUF560) FIM01_RS15080 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS15080 PF00593 TonB dependent receptor FIM01_RS15090 PF08281 Sigma-70, region 4 FIM01_RS15090 PF04542 Sigma-70 region 2 FIM01_RS15100 PF00701 Dihydrodipicolinate synthetase family FIM01_RS15105 PF00083 Sugar (and other) transporter FIM01_RS15125 PF01026 TatD related DNase FIM01_RS15140 PF07693 KAP family P-loop domain FIM01_RS15215 PF13356 Arm DNA-binding domain FIM01_RS15215 PF00589 Phage integrase family FIM01_RS15230 PF00717 Peptidase S24-like FIM01_RS15235 PF00817 impB/mucB/samB family FIM01_RS15235 PF11799 impB/mucB/samB family C-terminal domain FIM01_RS15235 PF11798 IMS family HHH motif FIM01_RS15235 PF13438 Domain of unknown function (DUF4113) FIM01_RS15305 PF02768 DNA polymerase III beta subunit, C-terminal domain FIM01_RS15305 PF00712 DNA polymerase III beta subunit, N-terminal domain FIM01_RS15305 PF02767 DNA polymerase III beta subunit, central domain FIM01_RS15475 PF07007 Lysozyme inhibitor LprI FIM01_RS15520 PF01695 IstB-like ATP binding protein FIM01_RS15530 PF00145 C-5 cytosine-specific DNA methylase FIM01_RS15575 PF00717 Peptidase S24-like FIM01_RS15575 PF01381 Helix-turn-helix FIM01_RS15610 PF00929 Exonuclease FIM01_RS15680 PF07690 Major Facilitator Superfamily FIM01_RS15685 PF13533 Biotin-lipoyl like FIM01_RS15690 PF03061 Thioesterase superfamily FIM01_RS15695 PF00490 Delta-aminolevulinic acid dehydratase FIM01_RS15700 PF01266 FAD dependent oxidoreductase FIM01_RS15705 PF08338 Domain of unknown function (DUF1731) FIM01_RS15705 PF01370 NAD dependent epimerase/dehydratase family FIM01_RS15725 PF00149 Calcineurin-like phosphoesterase FIM01_RS15725 PF12320 Type 5 capsule protein repressor C-terminal domain FIM01_RS15735 PF01168 Alanine racemase, N-terminal domain FIM01_RS15740 PF00437 Type II/IV secretion system protein FIM01_RS15745 PF00437 Type II/IV secretion system protein FIM01_RS15750 PF01475 Ferric uptake regulator family FIM01_RS15755 PF04355 SmpA / OmlA family FIM01_RS15760 PF03658 RnfH family Ubiquitin FIM01_RS15775 PF01814 Hemerythrin HHE cation binding domain FIM01_RS15780 PF13230 Glutamine amidotransferases class-II FIM01_RS15790 PF00696 Amino acid kinase family FIM01_RS15795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIM01_RS15795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIM01_RS15795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIM01_RS15795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIM01_RS15800 PF00692 dUTPase FIM01_RS15805 PF13361 UvrD-like helicase C-terminal domain FIM01_RS15805 PF00580 UvrD/REP helicase N-terminal domain FIM01_RS15810 PF00691 OmpA family FIM01_RS15810 PF13488 Glycine zipper FIM01_RS15815 PF01553 Acyltransferase FIM01_RS15825 PF03775 Septum formation inhibitor MinC, C-terminal domain FIM01_RS15830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIM01_RS15835 PF03776 Septum formation topological specificity factor MinE FIM01_RS15845 PF01810 LysE type translocator FIM01_RS15850 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FIM01_RS15850 PF17854 FtsK alpha domain FIM01_RS15850 PF09397 Ftsk gamma domain FIM01_RS15850 PF01580 FtsK/SpoIIIE family FIM01_RS15855 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS15860 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FIM01_RS15880 PF00583 Acetyltransferase (GNAT) family FIM01_RS15895 PF03143 Elongation factor Tu C-terminal domain FIM01_RS15895 PF03144 Elongation factor Tu domain 2 FIM01_RS15895 PF00009 Elongation factor Tu GTP binding domain FIM01_RS15900 PF00679 Elongation factor G C-terminus FIM01_RS15900 PF03144 Elongation factor Tu domain 2 FIM01_RS15900 PF00009 Elongation factor Tu GTP binding domain FIM01_RS15900 PF03764 Elongation factor G, domain IV FIM01_RS15900 PF14492 Elongation Factor G, domain II FIM01_RS15905 PF00177 Ribosomal protein S7p/S5e FIM01_RS15910 PF00164 Ribosomal protein S12/S23 FIM01_RS15920 PF02801 Beta-ketoacyl synthase, C-terminal domain FIM01_RS15920 PF00109 Beta-ketoacyl synthase, N-terminal domain FIM01_RS15925 PF03653 Uncharacterised protein family (UPF0093) FIM01_RS15930 PF05726 Pirin C-terminal cupin domain FIM01_RS15930 PF02678 Pirin FIM01_RS15940 PF02540 NAD synthase FIM01_RS15940 PF00795 Carbon-nitrogen hydrolase FIM01_RS15955 PF00970 Oxidoreductase FAD-binding domain FIM01_RS15955 PF00111 2Fe-2S iron-sulfur cluster binding domain FIM01_RS15955 PF00175 Oxidoreductase NAD-binding domain FIM01_RS15960 PF00171 Aldehyde dehydrogenase family FIM01_RS15965 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FIM01_RS15965 PF00355 Rieske [2Fe-2S] domain FIM01_RS15970 PF07859 alpha/beta hydrolase fold FIM01_RS15975 PF02028 BCCT, betaine/carnitine/choline family transporter FIM01_RS15980 PF00180 Isocitrate/isopropylmalate dehydrogenase FIM01_RS15985 PF03466 LysR substrate binding domain FIM01_RS15985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS16005 PF00037 4Fe-4S binding domain FIM01_RS16010 PF01467 Cytidylyltransferase-like FIM01_RS16015 PF01668 SmpB protein FIM01_RS16020 PF03358 NADPH-dependent FMN reductase FIM01_RS16025 PF02578 Multi-copper polyphenol oxidoreductase laccase FIM01_RS16030 PF01479 S4 domain FIM01_RS16030 PF00849 RNA pseudouridylate synthase FIM01_RS16035 PF13525 Outer membrane lipoprotein FIM01_RS16040 PF10410 DnaB-helicase binding domain of primase FIM01_RS16040 PF08278 DNA primase DnaG DnaB-binding FIM01_RS16040 PF08275 DNA primase catalytic core, N-terminal domain FIM01_RS16040 PF01807 CHC2 zinc finger FIM01_RS16045 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FIM01_RS16045 PF01488 Shikimate / quinate 5-dehydrogenase FIM01_RS16045 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FIM01_RS16055 PF03550 Outer membrane lipoprotein LolB FIM01_RS16060 PF08544 GHMP kinases C terminal FIM01_RS16060 PF00288 GHMP kinases N terminal domain FIM01_RS16085 PF14572 Phosphoribosyl synthetase-associated domain FIM01_RS16085 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FIM01_RS16090 PF01386 Ribosomal L25p family FIM01_RS16095 PF01195 Peptidyl-tRNA hydrolase FIM01_RS16100 PF02261 Aspartate decarboxylase FIM01_RS16115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FIM01_RS16125 PF02581 Thiamine monophosphate synthase FIM01_RS16125 PF03070 TENA/THI-4/PQQC family FIM01_RS16125 PF08543 Phosphomethylpyrimidine kinase FIM01_RS16130 PF04972 BON domain FIM01_RS16130 PF01476 LysM domain FIM01_RS16135 PF00550 Phosphopantetheine attachment site FIM01_RS16145 PF00698 Acyl transferase domain FIM01_RS16150 PF01783 Ribosomal L32p protein family FIM01_RS16155 PF02620 Large ribosomal RNA subunit accumulation protein YceD FIM01_RS16160 PF04315 Elongation factor P hydroxylase FIM01_RS16165 PF01300 Telomere recombination FIM01_RS16170 PF02616 Segregation and condensation protein ScpA FIM01_RS16175 PF04079 Segregation and condensation complex subunit ScpB FIM01_RS16180 PF00849 RNA pseudouridylate synthase FIM01_RS16180 PF01479 S4 domain FIM01_RS16195 PF00155 Aminotransferase class I and II FIM01_RS16200 PF06968 Biotin and Thiamin Synthesis associated domain FIM01_RS16200 PF00202 Aminotransferase class-III FIM01_RS16200 PF04055 Radical SAM superfamily FIM01_RS16205 PF08241 Methyltransferase domain FIM01_RS16205 PF12697 Alpha/beta hydrolase family FIM01_RS16210 PF02358 Trehalose-phosphatase FIM01_RS16215 PF00982 Glycosyltransferase family 20 FIM01_RS16220 PF07690 Major Facilitator Superfamily FIM01_RS16225 PF00210 Ferritin-like domain FIM01_RS16230 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FIM01_RS16230 PF01653 NAD-dependent DNA ligase adenylation domain FIM01_RS16230 PF00533 BRCA1 C Terminus (BRCT) domain FIM01_RS16230 PF03120 NAD-dependent DNA ligase OB-fold domain FIM01_RS16230 PF12826 Helix-hairpin-helix motif FIM01_RS16240 PF02463 RecF/RecN/SMC N terminal domain FIM01_RS16240 PF06470 SMC proteins Flexible Hinge Domain FIM01_RS16250 PF01925 Sulfite exporter TauE/SafE FIM01_RS16260 PF03309 Type III pantothenate kinase FIM01_RS16265 PF02881 SRP54-type protein, helical bundle domain FIM01_RS16265 PF00448 SRP54-type protein, GTPase domain FIM01_RS16265 PF02978 Signal peptide binding domain FIM01_RS16275 PF01207 Dihydrouridine synthase (Dus) FIM01_RS16310 PF00692 dUTPase FIM01_RS16325 PF01048 Phosphorylase superfamily FIM01_RS16335 PF10609 NUBPL iron-transfer P-loop NTPase FIM01_RS16345 PF01588 Putative tRNA binding domain FIM01_RS16345 PF09334 tRNA synthetases class I (M) FIM01_RS16370 PF13533 Biotin-lipoyl like FIM01_RS16375 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS16390 PF05552 Conserved TM helix FIM01_RS16405 PF00970 Oxidoreductase FAD-binding domain FIM01_RS16405 PF00175 Oxidoreductase NAD-binding domain FIM01_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS16410 PF03466 LysR substrate binding domain FIM01_RS16420 PF00313 'Cold-shock' DNA-binding domain FIM01_RS16430 PF00361 Proton-conducting membrane transporter FIM01_RS16435 PF00361 Proton-conducting membrane transporter FIM01_RS16440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FIM01_RS16440 PF00361 Proton-conducting membrane transporter FIM01_RS16445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FIM01_RS16450 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FIM01_RS16455 PF12838 4Fe-4S dicluster domain FIM01_RS16460 PF00146 NADH dehydrogenase FIM01_RS16465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FIM01_RS16465 PF00384 Molybdopterin oxidoreductase FIM01_RS16465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIM01_RS16470 PF10531 SLBB domain FIM01_RS16470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FIM01_RS16470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FIM01_RS16480 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FIM01_RS16480 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FIM01_RS16485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FIM01_RS16490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FIM01_RS16495 PF17151 Periplasmic sensor domain FIM01_RS16495 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS16505 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS16505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS16505 PF00672 HAMP domain FIM01_RS16510 PF00072 Response regulator receiver domain FIM01_RS16510 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS16520 PF03477 ATP cone domain FIM01_RS16520 PF00317 Ribonucleotide reductase, all-alpha domain FIM01_RS16520 PF02867 Ribonucleotide reductase, barrel domain FIM01_RS16530 PF00268 Ribonucleotide reductase, small chain FIM01_RS16540 PF02567 Phenazine biosynthesis-like protein FIM01_RS16570 PF16295 Tetracyclin repressor-like, C-terminal domain FIM01_RS16570 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS16590 PF01613 Flavin reductase like domain FIM01_RS16595 PF01717 Cobalamin-independent synthase, Catalytic domain FIM01_RS16595 PF08267 Cobalamin-independent synthase, N-terminal domain FIM01_RS16605 PF03466 LysR substrate binding domain FIM01_RS16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS16610 PF01810 LysE type translocator FIM01_RS16620 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIM01_RS16620 PF12833 Helix-turn-helix domain FIM01_RS16625 PF01546 Peptidase family M20/M25/M40 FIM01_RS16625 PF07687 Peptidase dimerisation domain FIM01_RS16635 PF03466 LysR substrate binding domain FIM01_RS16635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS16645 PF07690 Major Facilitator Superfamily FIM01_RS16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS16655 PF03466 LysR substrate binding domain FIM01_RS16660 PF14537 Cytochrome c3 FIM01_RS16660 PF00890 FAD binding domain FIM01_RS16670 PF02515 CoA-transferase family III FIM01_RS16675 PF07690 Major Facilitator Superfamily FIM01_RS16680 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS16680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS16680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS16685 PF03466 LysR substrate binding domain FIM01_RS16690 PF00107 Zinc-binding dehydrogenase FIM01_RS16690 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS16695 PF00962 Adenosine/AMP deaminase FIM01_RS16725 PF02445 Quinolinate synthetase A protein FIM01_RS16730 PF01960 ArgJ family FIM01_RS16735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIM01_RS16735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIM01_RS16740 PF00893 Small Multidrug Resistance protein FIM01_RS16750 PF05275 Copper resistance protein B precursor (CopB) FIM01_RS16755 PF07732 Multicopper oxidase FIM01_RS16755 PF07731 Multicopper oxidase FIM01_RS16755 PF00394 Multicopper oxidase FIM01_RS16770 PF00834 Ribulose-phosphate 3 epimerase family FIM01_RS16780 PF00756 Putative esterase FIM01_RS16790 PF04445 Putative SAM-dependent methyltransferase FIM01_RS16795 PF00814 Glycoprotease family FIM01_RS16800 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS16805 PF00293 NUDIX domain FIM01_RS16845 PF04715 Anthranilate synthase component I, N terminal region FIM01_RS16845 PF00425 chorismate binding enzyme FIM01_RS16850 PF00155 Aminotransferase class I and II FIM01_RS16855 PF00815 Histidinol dehydrogenase FIM01_RS16860 PF01634 ATP phosphoribosyltransferase FIM01_RS16865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIM01_RS16870 PF01722 BolA-like protein FIM01_RS16875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FIM01_RS16880 PF04963 Sigma-54 factor, core binding domain FIM01_RS16880 PF00309 Sigma-54 factor, Activator interacting domain (AID) FIM01_RS16880 PF04552 Sigma-54, DNA binding domain FIM01_RS16925 PF00795 Carbon-nitrogen hydrolase FIM01_RS16935 PF01047 MarR family FIM01_RS16940 PF02566 OsmC-like protein FIM01_RS16945 PF00437 Type II/IV secretion system protein FIM01_RS16965 PF00476 DNA polymerase family A FIM01_RS16965 PF01612 3'-5' exonuclease FIM01_RS16965 PF01367 5'-3' exonuclease, C-terminal SAM fold FIM01_RS16965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FIM01_RS16970 PF02325 YGGT family FIM01_RS16975 PF14748 Pyrroline-5-carboxylate reductase dimerisation FIM01_RS16975 PF03807 NADP oxidoreductase coenzyme F420-dependent FIM01_RS16980 PF01171 PP-loop family FIM01_RS16980 PF09179 TilS substrate binding domain FIM01_RS16980 PF11734 TilS substrate C-terminal domain FIM01_RS16985 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FIM01_RS16990 PF02541 Ppx/GppA phosphatase family FIM01_RS16995 PF00085 Thioredoxin FIM01_RS17000 PF07497 Rho termination factor, RNA-binding domain FIM01_RS17000 PF07498 Rho termination factor, N-terminal domain FIM01_RS17000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIM01_RS17015 PF00216 Bacterial DNA-binding protein FIM01_RS17020 PF03483 B3/4 domain FIM01_RS17020 PF03484 tRNA synthetase B5 domain FIM01_RS17020 PF03147 Ferredoxin-fold anticodon binding domain FIM01_RS17020 PF01588 Putative tRNA binding domain FIM01_RS17020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FIM01_RS17025 PF01409 tRNA synthetases class II core domain (F) FIM01_RS17025 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FIM01_RS17040 PF00453 Ribosomal protein L20 FIM01_RS17045 PF01632 Ribosomal protein L35 FIM01_RS17050 PF07690 Major Facilitator Superfamily FIM01_RS17055 PF09335 SNARE associated Golgi protein FIM01_RS17060 PF00043 Glutathione S-transferase, C-terminal domain FIM01_RS17060 PF02798 Glutathione S-transferase, N-terminal domain FIM01_RS17065 PF05198 Translation initiation factor IF-3, N-terminal domain FIM01_RS17065 PF00707 Translation initiation factor IF-3, C-terminal domain FIM01_RS17070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIM01_RS17070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIM01_RS17070 PF02824 TGS domain FIM01_RS17070 PF03129 Anticodon binding domain FIM01_RS17075 PF00501 AMP-binding enzyme FIM01_RS17075 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS17080 PF04751 Protein of unknown function (DUF615) FIM01_RS17085 PF00381 PTS HPr component phosphorylation site FIM01_RS17090 PF03668 P-loop ATPase protein family FIM01_RS17095 PF02569 Pantoate-beta-alanine ligase FIM01_RS17100 PF02548 Ketopantoate hydroxymethyltransferase FIM01_RS17105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FIM01_RS17110 PF01743 Poly A polymerase head domain FIM01_RS17110 PF12626 Polymerase A arginine-rich C-terminus FIM01_RS17110 PF12627 Probable RNA and SrmB- binding site of polymerase A FIM01_RS17120 PF03819 MazG nucleotide pyrophosphohydrolase domain FIM01_RS17130 PF02824 TGS domain FIM01_RS17130 PF04607 Region found in RelA / SpoT proteins FIM01_RS17130 PF13291 ACT domain FIM01_RS17135 PF05958 tRNA (Uracil-5-)-methyltransferase FIM01_RS17145 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS17150 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS17150 PF00672 HAMP domain FIM01_RS17150 PF00072 Response regulator receiver domain FIM01_RS17150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIM01_RS17150 PF01627 Hpt domain FIM01_RS17155 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS17160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIM01_RS17160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIM01_RS17165 PF01261 Xylose isomerase-like TIM barrel FIM01_RS17175 PF00106 short chain dehydrogenase FIM01_RS17180 PF02233 NAD(P) transhydrogenase beta subunit FIM01_RS17185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FIM01_RS17190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FIM01_RS17190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FIM01_RS17195 PF00892 EamA-like transporter family FIM01_RS17205 PF07690 Major Facilitator Superfamily FIM01_RS17225 PF07731 Multicopper oxidase FIM01_RS17225 PF07732 Multicopper oxidase FIM01_RS17225 PF00394 Multicopper oxidase FIM01_RS17235 PF00486 Transcriptional regulatory protein, C terminal FIM01_RS17235 PF00072 Response regulator receiver domain FIM01_RS17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS17240 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS17240 PF00672 HAMP domain FIM01_RS17245 PF04945 YHS domain FIM01_RS17325 PF00589 Phage integrase family FIM01_RS17330 PF01207 Dihydrouridine synthase (Dus) FIM01_RS17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS17340 PF03466 LysR substrate binding domain FIM01_RS17350 PF00899 ThiF family FIM01_RS17355 PF00330 Aconitase family (aconitate hydratase) FIM01_RS17355 PF00694 Aconitase C-terminal domain FIM01_RS17360 PF01026 TatD related DNase FIM01_RS17375 PF00009 Elongation factor Tu GTP binding domain FIM01_RS17375 PF03144 Elongation factor Tu domain 2 FIM01_RS17375 PF16658 Class II release factor RF3, C-terminal domain FIM01_RS17400 PF03707 Bacterial signalling protein N terminal repeat FIM01_RS17400 PF00563 EAL domain FIM01_RS17400 PF00990 Diguanylate cyclase, GGDEF domain FIM01_RS17405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FIM01_RS17405 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FIM01_RS17410 PF10369 Small subunit of acetolactate synthase FIM01_RS17415 PF00205 Thiamine pyrophosphate enzyme, central domain FIM01_RS17415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIM01_RS17415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIM01_RS17425 PF09334 tRNA synthetases class I (M) FIM01_RS17425 PF00133 tRNA synthetases class I (I, L, M and V) FIM01_RS17425 PF08264 Anticodon-binding domain of tRNA FIM01_RS17425 PF13603 Leucyl-tRNA synthetase, Domain 2 FIM01_RS17440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIM01_RS17445 PF00005 ABC transporter FIM01_RS17445 PF02687 FtsX-like permease family FIM01_RS17445 PF12704 MacB-like periplasmic core domain FIM01_RS17450 PF02321 Outer membrane efflux protein FIM01_RS17465 PF00929 Exonuclease FIM01_RS17470 PF03193 RsgA GTPase FIM01_RS17480 PF00462 Glutaredoxin FIM01_RS17485 PF02556 Preprotein translocase subunit SecB FIM01_RS17495 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FIM01_RS17495 PF01926 50S ribosome-binding GTPase FIM01_RS17500 PF13360 PQQ-like domain FIM01_RS17510 PF13393 Histidyl-tRNA synthetase FIM01_RS17510 PF03129 Anticodon binding domain FIM01_RS17515 PF04551 GcpE protein FIM01_RS17520 PF13464 Domain of unknown function (DUF4115) FIM01_RS17530 PF04055 Radical SAM superfamily FIM01_RS17535 PF00334 Nucleoside diphosphate kinase FIM01_RS17540 PF04384 Iron-sulphur cluster assembly FIM01_RS17545 PF01569 PAP2 superfamily FIM01_RS17550 PF00534 Glycosyl transferases group 1 FIM01_RS17550 PF13439 Glycosyltransferase Family 4 FIM01_RS17555 PF00595 PDZ domain FIM01_RS17555 PF11818 C-terminal domain of tail specific protease (DUF3340) FIM01_RS17555 PF03572 Peptidase family S41 FIM01_RS17555 PF17804 Tail specific protease N-terminal domain FIM01_RS17560 PF00933 Glycosyl hydrolase family 3 N terminal domain FIM01_RS17570 PF00561 alpha/beta hydrolase fold FIM01_RS17575 PF00171 Aldehyde dehydrogenase family FIM01_RS17580 PF00171 Aldehyde dehydrogenase family FIM01_RS17585 PF01202 Shikimate kinase FIM01_RS17590 PF02447 GntP family permease FIM01_RS17595 PF01081 KDPG and KHG aldolase FIM01_RS17600 PF00920 Dehydratase family FIM01_RS17605 PF00871 Acetokinase family FIM01_RS17610 PF01515 Phosphate acetyl/butaryl transferase FIM01_RS17610 PF07085 DRTGG domain FIM01_RS17615 PF05683 Fumarase C-terminus FIM01_RS17615 PF05681 Fumarate hydratase (Fumerase) FIM01_RS17630 PF10431 C-terminal, D2-small domain, of ClpB protein FIM01_RS17630 PF06689 ClpX C4-type zinc finger FIM01_RS17630 PF07724 AAA domain (Cdc48 subfamily) FIM01_RS17635 PF00574 Clp protease FIM01_RS17640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIM01_RS17640 PF05698 Bacterial trigger factor protein (TF) C-terminus FIM01_RS17640 PF05697 Bacterial trigger factor protein (TF) FIM01_RS17645 PF00593 TonB dependent receptor FIM01_RS17645 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS17650 PF13640 2OG-Fe(II) oxygenase superfamily FIM01_RS17650 PF18331 PKHD-type hydroxylase C-terminal domain FIM01_RS17655 PF08502 LeuA allosteric (dimerisation) domain FIM01_RS17655 PF00682 HMGL-like FIM01_RS17660 PF00561 alpha/beta hydrolase fold FIM01_RS17665 PF07021 Methionine biosynthesis protein MetW FIM01_RS17665 PF00561 alpha/beta hydrolase fold FIM01_RS17675 PF01725 Ham1 family FIM01_RS17685 PF02416 mttA/Hcf106 family FIM01_RS17690 PF02416 mttA/Hcf106 family FIM01_RS17695 PF00902 Sec-independent protein translocase protein (TatC) FIM01_RS17715 PF01790 Prolipoprotein diacylglyceryl transferase FIM01_RS17730 PF00303 Thymidylate synthase FIM01_RS17735 PF00186 Dihydrofolate reductase FIM01_RS17745 PF01625 Peptide methionine sulfoxide reductase FIM01_RS17755 PF01618 MotA/TolQ/ExbB proton channel family FIM01_RS17765 PF00551 Formyl transferase FIM01_RS17765 PF01842 ACT domain FIM01_RS17775 PF00171 Aldehyde dehydrogenase family FIM01_RS17780 PF00830 Ribosomal L28 family FIM01_RS17785 PF00471 Ribosomal protein L33 FIM01_RS17790 PF02254 TrkA-N domain FIM01_RS17790 PF00999 Sodium/hydrogen exchanger family FIM01_RS17810 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FIM01_RS17815 PF13361 UvrD-like helicase C-terminal domain FIM01_RS17815 PF00580 UvrD/REP helicase N-terminal domain FIM01_RS17830 PF01131 DNA topoisomerase FIM01_RS17830 PF01751 Toprim domain FIM01_RS17830 PF08272 Topoisomerase I zinc-ribbon-like FIM01_RS17830 PF01396 Topoisomerase DNA binding C4 zinc finger FIM01_RS17840 PF01638 HxlR-like helix-turn-helix FIM01_RS17845 PF08240 Alcohol dehydrogenase GroES-like domain FIM01_RS17845 PF00107 Zinc-binding dehydrogenase FIM01_RS17850 PF04102 SlyX FIM01_RS17855 PF12848 ABC transporter FIM01_RS17855 PF16326 ABC transporter C-terminal domain FIM01_RS17855 PF00005 ABC transporter FIM01_RS17860 PF01810 LysE type translocator FIM01_RS17865 PF03279 Bacterial lipid A biosynthesis acyltransferase FIM01_RS17875 PF00375 Sodium:dicarboxylate symporter family FIM01_RS17885 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIM01_RS17885 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIM01_RS17905 PF01416 tRNA pseudouridine synthase FIM01_RS17915 PF01176 Translation initiation factor 1A / IF-1 FIM01_RS17930 PF00180 Isocitrate/isopropylmalate dehydrogenase FIM01_RS17940 PF00694 Aconitase C-terminal domain FIM01_RS17945 PF00330 Aconitase family (aconitate hydratase) FIM01_RS17955 PF03466 LysR substrate binding domain FIM01_RS17955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS17965 PF00293 NUDIX domain FIM01_RS17970 PF05524 PEP-utilising enzyme, N-terminal FIM01_RS17970 PF02896 PEP-utilising enzyme, TIM barrel domain FIM01_RS17970 PF00391 PEP-utilising enzyme, mobile domain FIM01_RS17970 PF01590 GAF domain FIM01_RS17975 PF00141 Peroxidase FIM01_RS17980 PF12706 Beta-lactamase superfamily domain FIM01_RS17985 PF03466 LysR substrate binding domain FIM01_RS17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS17995 PF02798 Glutathione S-transferase, N-terminal domain FIM01_RS18000 PF13280 WYL domain FIM01_RS18000 PF08279 HTH domain FIM01_RS18005 PF13419 Haloacid dehalogenase-like hydrolase FIM01_RS18010 PF00849 RNA pseudouridylate synthase FIM01_RS18010 PF01479 S4 domain FIM01_RS18020 PF00575 S1 RNA binding domain FIM01_RS18020 PF10150 Ribonuclease E/G family FIM01_RS18020 PF12111 Polyribonucleotide phosphorylase C terminal FIM01_RS18025 PF00501 AMP-binding enzyme FIM01_RS18025 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS18040 PF03466 LysR substrate binding domain FIM01_RS18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIM01_RS18045 PF00106 short chain dehydrogenase FIM01_RS18050 PF06969 HemN C-terminal domain FIM01_RS18050 PF04055 Radical SAM superfamily FIM01_RS18060 PF01554 MatE FIM01_RS18065 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS18065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS18065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS18070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS18070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS18075 PF03109 ABC1 family FIM01_RS18080 PF01197 Ribosomal protein L31 FIM01_RS18090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FIM01_RS18100 PF13247 4Fe-4S dicluster domain FIM01_RS18100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FIM01_RS18100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS18110 PF03884 DNA gyrase inhibitor YacG FIM01_RS18115 PF00753 Metallo-beta-lactamase superfamily FIM01_RS18120 PF00762 Ferrochelatase FIM01_RS18130 PF01177 Asp/Glu/Hydantoin racemase FIM01_RS18150 PF01206 Sulfurtransferase TusA FIM01_RS18155 PF00571 CBS domain FIM01_RS18155 PF03471 Transporter associated domain FIM01_RS18160 PF00795 Carbon-nitrogen hydrolase FIM01_RS18165 PF01588 Putative tRNA binding domain FIM01_RS18175 PF08334 Type II secretion system (T2SS), protein G FIM01_RS18175 PF07963 Prokaryotic N-terminal methylation motif FIM01_RS18180 PF00482 Type II secretion system (T2SS), protein F FIM01_RS18185 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FIM01_RS18185 PF18074 Primosomal protein N C-terminal domain FIM01_RS18185 PF00270 DEAD/DEAH box helicase FIM01_RS18185 PF00271 Helicase conserved C-terminal domain FIM01_RS18185 PF17764 3′ DNA-binding domain (3′BD) FIM01_RS18190 PF02254 TrkA-N domain FIM01_RS18190 PF00999 Sodium/hydrogen exchanger family FIM01_RS18195 PF01430 Hsp33 protein FIM01_RS18205 PF01556 DnaJ C terminal domain FIM01_RS18205 PF00226 DnaJ domain FIM01_RS18215 PF01544 CorA-like Mg2+ transporter protein FIM01_RS18220 PF03725 3' exoribonuclease family, domain 2 FIM01_RS18220 PF01138 3' exoribonuclease family, domain 1 FIM01_RS18220 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FIM01_RS18220 PF00013 KH domain FIM01_RS18220 PF00575 S1 RNA binding domain FIM01_RS18225 PF00312 Ribosomal protein S15 FIM01_RS18230 PF00144 Beta-lactamase FIM01_RS18235 PF13538 UvrD-like helicase C-terminal domain FIM01_RS18240 PF13361 UvrD-like helicase C-terminal domain FIM01_RS18240 PF00580 UvrD/REP helicase N-terminal domain FIM01_RS18240 PF12705 PD-(D/E)XK nuclease superfamily FIM01_RS18245 PF17946 RecC C-terminal domain FIM01_RS18255 PF03976 Polyphosphate kinase 2 (PPK2) FIM01_RS18265 PF01209 ubiE/COQ5 methyltransferase family FIM01_RS18275 PF03109 ABC1 family FIM01_RS18280 PF01494 FAD binding domain FIM01_RS18285 PF01502 Phosphoribosyl-AMP cyclohydrolase FIM01_RS18300 PF13244 Domain of unknown function (DUF4040) FIM01_RS18300 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FIM01_RS18300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FIM01_RS18300 PF00361 Proton-conducting membrane transporter FIM01_RS18305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FIM01_RS18310 PF00361 Proton-conducting membrane transporter FIM01_RS18315 PF01899 Na+/H+ ion antiporter subunit FIM01_RS18320 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FIM01_RS18325 PF03334 Na+/H+ antiporter subunit FIM01_RS18330 PF02033 Ribosome-binding factor A FIM01_RS18335 PF04760 Translation initiation factor IF-2, N-terminal region FIM01_RS18335 PF08364 Bacterial translation initiation factor IF-2 associated region FIM01_RS18335 PF11987 Translation-initiation factor 2 FIM01_RS18335 PF00009 Elongation factor Tu GTP binding domain FIM01_RS18340 PF08529 NusA N-terminal domain FIM01_RS18340 PF13184 NusA-like KH domain FIM01_RS18340 PF00575 S1 RNA binding domain FIM01_RS18345 PF17384 RimP C-terminal SH3 domain FIM01_RS18345 PF02576 RimP N-terminal domain FIM01_RS18365 PF03840 Preprotein translocase SecG subunit FIM01_RS18370 PF00121 Triosephosphate isomerase FIM01_RS18375 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FIM01_RS18375 PF00437 Type II/IV secretion system protein FIM01_RS18380 PF00482 Type II secretion system (T2SS), protein F FIM01_RS18385 PF01478 Type IV leader peptidase family FIM01_RS18385 PF06750 Bacterial Peptidase A24 N-terminal domain FIM01_RS18390 PF01121 Dephospho-CoA kinase FIM01_RS18400 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIM01_RS18400 PF00588 SpoU rRNA Methylase family FIM01_RS18405 PF06865 Pyrimidine/purine nucleoside phosphorylase FIM01_RS18415 PF02463 RecF/RecN/SMC N terminal domain FIM01_RS18420 PF02622 Uncharacterized ACR, COG1678 FIM01_RS18425 PF03652 Holliday junction resolvase FIM01_RS18430 PF13533 Biotin-lipoyl like FIM01_RS18455 PF02805 Metal binding domain of Ada FIM01_RS18455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIM01_RS18455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIM01_RS18455 PF12833 Helix-turn-helix domain FIM01_RS18460 PF01066 CDP-alcohol phosphatidyltransferase FIM01_RS18470 PF02151 UvrB/uvrC motif FIM01_RS18470 PF01541 GIY-YIG catalytic domain FIM01_RS18470 PF08459 UvrC Helix-hairpin-helix N-terminal FIM01_RS18490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIM01_RS18490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIM01_RS18490 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS18495 PF00108 Thiolase, N-terminal domain FIM01_RS18495 PF02803 Thiolase, C-terminal domain FIM01_RS18510 PF09278 MerR, DNA binding FIM01_RS18510 PF00376 MerR family regulatory protein FIM01_RS18520 PF01323 DSBA-like thioredoxin domain FIM01_RS18535 PF00183 Hsp90 protein FIM01_RS18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS18555 PF03553 Na+/H+ antiporter family FIM01_RS18555 PF13726 Na+-H+ antiporter family FIM01_RS18580 PF00623 RNA polymerase Rpb1, domain 2 FIM01_RS18580 PF04997 RNA polymerase Rpb1, domain 1 FIM01_RS18580 PF05000 RNA polymerase Rpb1, domain 4 FIM01_RS18580 PF04983 RNA polymerase Rpb1, domain 3 FIM01_RS18580 PF04998 RNA polymerase Rpb1, domain 5 FIM01_RS18585 PF04561 RNA polymerase Rpb2, domain 2 FIM01_RS18585 PF00562 RNA polymerase Rpb2, domain 6 FIM01_RS18585 PF10385 RNA polymerase beta subunit external 1 domain FIM01_RS18585 PF04563 RNA polymerase beta subunit FIM01_RS18585 PF04560 RNA polymerase Rpb2, domain 7 FIM01_RS18585 PF04565 RNA polymerase Rpb2, domain 3 FIM01_RS18590 PF00542 Ribosomal protein L7/L12 C-terminal domain FIM01_RS18590 PF16320 Ribosomal protein L7/L12 dimerisation domain FIM01_RS18595 PF00466 Ribosomal protein L10 FIM01_RS18600 PF00687 Ribosomal protein L1p/L10e family FIM01_RS18605 PF03946 Ribosomal protein L11, N-terminal domain FIM01_RS18605 PF00298 Ribosomal protein L11, RNA binding domain FIM01_RS18610 PF02357 Transcription termination factor nusG FIM01_RS18610 PF00467 KOW motif FIM01_RS18615 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FIM01_RS18625 PF03143 Elongation factor Tu C-terminal domain FIM01_RS18625 PF03144 Elongation factor Tu domain 2 FIM01_RS18625 PF00009 Elongation factor Tu GTP binding domain FIM01_RS18650 PF00425 chorismate binding enzyme FIM01_RS18650 PF04715 Anthranilate synthase component I, N terminal region FIM01_RS18655 PF13419 Haloacid dehalogenase-like hydrolase FIM01_RS18660 PF12401 Protein of unknown function (DUF2662) FIM01_RS18660 PF00498 FHA domain FIM01_RS18665 PF00263 Bacterial type II and III secretion system protein FIM01_RS18665 PF03958 Bacterial type II/III secretion system short domain FIM01_RS18680 PF00816 H-NS histone family FIM01_RS18705 PF03900 Porphobilinogen deaminase, C-terminal domain FIM01_RS18705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FIM01_RS18710 PF04397 LytTr DNA-binding domain FIM01_RS18710 PF00072 Response regulator receiver domain FIM01_RS18715 PF06580 Histidine kinase FIM01_RS18715 PF07694 5TMR of 5TMR-LYT FIM01_RS18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS18720 PF00206 Lyase FIM01_RS18720 PF14698 Argininosuccinate lyase C-terminal FIM01_RS18725 PF04362 Bacterial Fe(2+) trafficking FIM01_RS18730 PF01895 PhoU domain FIM01_RS18735 PF02321 Outer membrane efflux protein FIM01_RS18740 PF00892 EamA-like transporter family FIM01_RS18755 PF01964 Radical SAM ThiC family FIM01_RS18755 PF13667 ThiC-associated domain FIM01_RS18760 PF00293 NUDIX domain FIM01_RS18765 PF00149 Calcineurin-like phosphoesterase FIM01_RS18770 PF01258 Prokaryotic dksA/traR C4-type zinc finger FIM01_RS18775 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIM01_RS18780 PF01098 Cell cycle protein FIM01_RS18785 PF08245 Mur ligase middle domain FIM01_RS18785 PF02875 Mur ligase family, glutamate ligase domain FIM01_RS18795 PF02421 Ferrous iron transport protein B FIM01_RS18795 PF07670 Nucleoside recognition FIM01_RS18795 PF07664 Ferrous iron transport protein B C terminus FIM01_RS18805 PF00589 Phage integrase family FIM01_RS18805 PF02899 Phage integrase, N-terminal SAM-like domain FIM01_RS18810 PF10411 Disulfide bond isomerase protein N-terminus FIM01_RS18810 PF13098 Thioredoxin-like domain FIM01_RS18815 PF01842 ACT domain FIM01_RS18815 PF03447 Homoserine dehydrogenase, NAD binding domain FIM01_RS18815 PF00742 Homoserine dehydrogenase FIM01_RS18820 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS18825 PF00768 D-alanyl-D-alanine carboxypeptidase FIM01_RS18830 PF00072 Response regulator receiver domain FIM01_RS18830 PF00196 Bacterial regulatory proteins, luxR family FIM01_RS18835 PF00512 His Kinase A (phospho-acceptor) domain FIM01_RS18835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIM01_RS18840 PF00158 Sigma-54 interaction domain FIM01_RS18840 PF02954 Bacterial regulatory protein, Fis family FIM01_RS18840 PF00072 Response regulator receiver domain FIM01_RS18845 PF03572 Peptidase family S41 FIM01_RS18845 PF00595 PDZ domain FIM01_RS18850 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FIM01_RS18850 PF01676 Metalloenzyme superfamily FIM01_RS18855 PF03739 Lipopolysaccharide export system permease LptF/LptG FIM01_RS18865 PF02789 Cytosol aminopeptidase family, N-terminal domain FIM01_RS18865 PF00883 Cytosol aminopeptidase family, catalytic domain FIM01_RS18885 PF00677 Lumazine binding domain FIM01_RS18895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIM01_RS18895 PF01872 RibD C-terminal domain FIM01_RS18900 PF03477 ATP cone domain FIM01_RS18905 PF00909 Ammonium Transporter Family FIM01_RS18910 PF00543 Nitrogen regulatory protein P-II FIM01_RS18920 PF01078 Magnesium chelatase, subunit ChlI FIM01_RS18920 PF13335 Magnesium chelatase, subunit ChlI C-terminal FIM01_RS18930 PF01740 STAS domain FIM01_RS18930 PF00916 Sulfate permease family FIM01_RS18950 PF01252 Signal peptidase (SPase) II FIM01_RS18960 PF13411 MerR HTH family regulatory protein FIM01_RS18965 PF03743 Bacterial conjugation TrbI-like protein FIM01_RS19000 PF00809 Pterin binding enzyme FIM01_RS19005 PF00893 Small Multidrug Resistance protein FIM01_RS19010 PF13427 Domain of unknown function (DUF4111) FIM01_RS19010 PF01909 Nucleotidyltransferase domain FIM01_RS19025 PF00583 Acetyltransferase (GNAT) family FIM01_RS19030 PF13495 Phage integrase, N-terminal SAM-like domain FIM01_RS19030 PF00589 Phage integrase family FIM01_RS19035 PF11809 Domain of unknown function (DUF3330) FIM01_RS19035 PF00563 EAL domain FIM01_RS19040 PF13610 DDE domain FIM01_RS19060 PF00892 EamA-like transporter family FIM01_RS19065 PF07690 Major Facilitator Superfamily FIM01_RS19070 PF02909 Tetracyclin repressor-like, C-terminal domain FIM01_RS19070 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS19080 PF09278 MerR, DNA binding FIM01_RS19080 PF00376 MerR family regulatory protein FIM01_RS19085 PF02411 MerT mercuric transport protein FIM01_RS19090 PF00403 Heavy-metal-associated domain FIM01_RS19095 PF03203 MerC mercury resistance protein FIM01_RS19100 PF00403 Heavy-metal-associated domain FIM01_RS19100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS19100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIM01_RS19105 PF13411 MerR HTH family regulatory protein FIM01_RS19110 PF05052 MerE protein FIM01_RS19120 PF00563 EAL domain FIM01_RS19120 PF11809 Domain of unknown function (DUF3330) FIM01_RS19135 PF13610 DDE domain FIM01_RS19155 PF00809 Pterin binding enzyme FIM01_RS19180 PF01396 Topoisomerase DNA binding C4 zinc finger FIM01_RS19180 PF01131 DNA topoisomerase FIM01_RS19180 PF01751 Toprim domain FIM01_RS19200 PF01252 Signal peptidase (SPase) II FIM01_RS19210 PF13411 MerR HTH family regulatory protein FIM01_RS19220 PF03960 ArsC family FIM01_RS19225 PF01022 Bacterial regulatory protein, arsR family FIM01_RS19235 PF01758 Sodium Bile acid symporter family FIM01_RS19240 PF03358 NADPH-dependent FMN reductase FIM01_RS19245 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIM01_RS19270 PF00665 Integrase core domain FIM01_RS19280 PF13335 Magnesium chelatase, subunit ChlI C-terminal FIM01_RS19280 PF01078 Magnesium chelatase, subunit ChlI FIM01_RS19285 PF00155 Aminotransferase class I and II FIM01_RS19285 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS19295 PF00701 Dihydrodipicolinate synthetase family FIM01_RS19305 PF03573 outer membrane porin, OprD family FIM01_RS19310 PF00719 Inorganic pyrophosphatase FIM01_RS19325 PF00501 AMP-binding enzyme FIM01_RS19325 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS19330 PF03989 DNA gyrase C-terminal domain, beta-propeller FIM01_RS19330 PF00521 DNA gyrase/topoisomerase IV, subunit A FIM01_RS19335 PF07690 Major Facilitator Superfamily FIM01_RS19340 PF03458 UPF0126 domain FIM01_RS19345 PF02810 SEC-C motif FIM01_RS19350 PF03741 Integral membrane protein TerC family FIM01_RS19350 PF03471 Transporter associated domain FIM01_RS19355 PF03641 Possible lysine decarboxylase FIM01_RS19360 PF07690 Major Facilitator Superfamily FIM01_RS19370 PF00817 impB/mucB/samB family FIM01_RS19370 PF11799 impB/mucB/samB family C-terminal domain FIM01_RS19370 PF11798 IMS family HHH motif FIM01_RS19385 PF11842 Domain of unknown function (DUF3362) FIM01_RS19385 PF04055 Radical SAM superfamily FIM01_RS19385 PF08497 Radical SAM N-terminal FIM01_RS19405 PF03358 NADPH-dependent FMN reductase FIM01_RS19415 PF00291 Pyridoxal-phosphate dependent enzyme FIM01_RS19450 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS19475 PF01327 Polypeptide deformylase FIM01_RS19485 PF02481 DNA recombination-mediator protein A FIM01_RS19485 PF17782 DprA winged helix domain FIM01_RS19490 PF01300 Telomere recombination FIM01_RS19495 PF00892 EamA-like transporter family FIM01_RS19500 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS19505 PF07690 Major Facilitator Superfamily FIM01_RS19515 PF00255 Glutathione peroxidase FIM01_RS19525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FIM01_RS19530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIM01_RS19530 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIM01_RS19535 PF00231 ATP synthase FIM01_RS19540 PF00306 ATP synthase alpha/beta chain, C terminal domain FIM01_RS19540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIM01_RS19540 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIM01_RS19545 PF00213 ATP synthase delta (OSCP) subunit FIM01_RS19550 PF00430 ATP synthase B/B' CF(0) FIM01_RS19555 PF00137 ATP synthase subunit C FIM01_RS19560 PF00119 ATP synthase A chain FIM01_RS19580 PF00005 ABC transporter FIM01_RS19585 PF00950 ABC 3 transport family FIM01_RS19590 PF01810 LysE type translocator FIM01_RS19595 PF04261 Dyp-type peroxidase family FIM01_RS19600 PF03949 Malic enzyme, NAD binding domain FIM01_RS19600 PF00390 Malic enzyme, N-terminal domain FIM01_RS19605 PF03485 Arginyl tRNA synthetase N terminal domain FIM01_RS19605 PF05746 DALR anticodon binding domain FIM01_RS19605 PF00750 tRNA synthetases class I (R) FIM01_RS19625 PF02678 Pirin FIM01_RS19625 PF05726 Pirin C-terminal cupin domain FIM01_RS19635 PF03551 Transcriptional regulator PadR-like family FIM01_RS19640 PF13427 Domain of unknown function (DUF4111) FIM01_RS19640 PF01909 Nucleotidyltransferase domain FIM01_RS19645 PF00117 Glutamine amidotransferase class-I FIM01_RS19645 PF00958 GMP synthase C terminal domain FIM01_RS19645 PF02540 NAD synthase FIM01_RS19650 PF04286 Protein of unknown function (DUF445) FIM01_RS19655 PF07681 DoxX FIM01_RS19660 PF09335 SNARE associated Golgi protein FIM01_RS19675 PF13614 AAA domain FIM01_RS19685 PF01722 BolA-like protein FIM01_RS19700 PF01648 4'-phosphopantetheinyl transferase superfamily FIM01_RS19705 PF12697 Alpha/beta hydrolase family FIM01_RS19720 PF00501 AMP-binding enzyme FIM01_RS19720 PF00550 Phosphopantetheine attachment site FIM01_RS19720 PF00975 Thioesterase domain FIM01_RS19720 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS19720 PF00668 Condensation domain FIM01_RS19725 PF00109 Beta-ketoacyl synthase, N-terminal domain FIM01_RS19725 PF00975 Thioesterase domain FIM01_RS19725 PF08242 Methyltransferase domain FIM01_RS19725 PF14765 Polyketide synthase dehydratase FIM01_RS19725 PF02801 Beta-ketoacyl synthase, C-terminal domain FIM01_RS19725 PF16197 Ketoacyl-synthetase C-terminal extension FIM01_RS19725 PF00550 Phosphopantetheine attachment site FIM01_RS19730 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS19730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS19730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS19735 PF00501 AMP-binding enzyme FIM01_RS19740 PF00196 Bacterial regulatory proteins, luxR family FIM01_RS19740 PF03472 Autoinducer binding domain FIM01_RS19750 PF00765 Autoinducer synthase FIM01_RS19755 PF00083 Sugar (and other) transporter FIM01_RS19755 PF07690 Major Facilitator Superfamily FIM01_RS19760 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS19765 PF00378 Enoyl-CoA hydratase/isomerase FIM01_RS19770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIM01_RS19770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIM01_RS19770 PF02770 Acyl-CoA dehydrogenase, middle domain FIM01_RS19775 PF13193 AMP-binding enzyme C-terminal domain FIM01_RS19775 PF00501 AMP-binding enzyme FIM01_RS19780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIM01_RS19780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIM01_RS19785 PF00171 Aldehyde dehydrogenase family FIM01_RS19795 PF00324 Amino acid permease FIM01_RS19800 PF00324 Amino acid permease FIM01_RS19805 PF01042 Endoribonuclease L-PSP FIM01_RS19810 PF00842 Alanine racemase, C-terminal domain FIM01_RS19810 PF01168 Alanine racemase, N-terminal domain FIM01_RS19815 PF01266 FAD dependent oxidoreductase FIM01_RS19820 PF01037 Lrp/AsnC ligand binding domain FIM01_RS19830 PF00593 TonB dependent receptor FIM01_RS19830 PF07715 TonB-dependent Receptor Plug Domain FIM01_RS19845 PF00849 RNA pseudouridylate synthase FIM01_RS19895 PF00330 Aconitase family (aconitate hydratase) FIM01_RS19895 PF00694 Aconitase C-terminal domain FIM01_RS19900 PF00285 Citrate synthase, C-terminal domain FIM01_RS19910 PF07729 FCD domain FIM01_RS19910 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS19915 PF00155 Aminotransferase class I and II FIM01_RS19920 PF01565 FAD binding domain FIM01_RS19920 PF09330 D-lactate dehydrogenase, membrane binding FIM01_RS19925 PF01070 FMN-dependent dehydrogenase FIM01_RS19930 PF07729 FCD domain FIM01_RS19930 PF00392 Bacterial regulatory proteins, gntR family FIM01_RS19935 PF02652 L-lactate permease FIM01_RS19940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIM01_RS19940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIM01_RS19940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIM01_RS19940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIM01_RS19945 PF00342 Phosphoglucose isomerase FIM01_RS19950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FIM01_RS19950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FIM01_RS19950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FIM01_RS19955 PF00483 Nucleotidyl transferase FIM01_RS19960 PF02719 Polysaccharide biosynthesis protein FIM01_RS19965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIM01_RS19970 PF14602 Hexapeptide repeat of succinyl-transferase FIM01_RS19970 PF00132 Bacterial transferase hexapeptide (six repeats) FIM01_RS19970 PF17836 PglD N-terminal domain FIM01_RS19975 PF02397 Bacterial sugar transferase FIM01_RS19980 PF13477 Glycosyl transferase 4-like FIM01_RS19980 PF00534 Glycosyl transferases group 1 FIM01_RS19990 PF13439 Glycosyltransferase Family 4 FIM01_RS19990 PF00534 Glycosyl transferases group 1 FIM01_RS20005 PF01370 NAD dependent epimerase/dehydratase family FIM01_RS20010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FIM01_RS20010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FIM01_RS20010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FIM01_RS20015 PF10531 SLBB domain FIM01_RS20015 PF02563 Polysaccharide biosynthesis/export protein FIM01_RS20015 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FIM01_RS20020 PF01451 Low molecular weight phosphotyrosine protein phosphatase FIM01_RS20025 PF13614 AAA domain FIM01_RS20025 PF02706 Chain length determinant protein FIM01_RS20025 PF13807 G-rich domain on putative tyrosine kinase FIM01_RS20030 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIM01_RS20030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIM01_RS20035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIM01_RS20035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIM01_RS20040 PF03023 Lipid II flippase MurJ FIM01_RS20045 PF01510 N-acetylmuramoyl-L-alanine amidase FIM01_RS20050 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FIM01_RS20050 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FIM01_RS20060 PF04185 Phosphoesterase family FIM01_RS20060 PF05506 Domain of unknown function (DUF756) FIM01_RS20065 PF01138 3' exoribonuclease family, domain 1 FIM01_RS20065 PF03725 3' exoribonuclease family, domain 2 FIM01_RS20070 PF00487 Fatty acid desaturase FIM01_RS20075 PF00175 Oxidoreductase NAD-binding domain FIM01_RS20080 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS20085 PF08360 QacR-like protein, C-terminal region FIM01_RS20085 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS20090 PF01323 DSBA-like thioredoxin domain FIM01_RS20100 PF13419 Haloacid dehalogenase-like hydrolase FIM01_RS20105 PF00106 short chain dehydrogenase FIM01_RS20120 PF00696 Amino acid kinase family FIM01_RS20120 PF00583 Acetyltransferase (GNAT) family FIM01_RS20125 PF09084 NMT1/THI5 like FIM01_RS20130 PF09084 NMT1/THI5 like FIM01_RS20135 PF00296 Luciferase-like monooxygenase FIM01_RS20140 PF00528 Binding-protein-dependent transport system inner membrane component FIM01_RS20145 PF00005 ABC transporter FIM01_RS20150 PF08362 YcdC-like protein, C-terminal region FIM01_RS20150 PF00440 Bacterial regulatory proteins, tetR family FIM01_RS20155 PF01048 Phosphorylase superfamily FIM01_RS20170 PF06574 FAD synthetase FIM01_RS20170 PF01687 Riboflavin kinase FIM01_RS20175 PF08264 Anticodon-binding domain of tRNA FIM01_RS20175 PF00133 tRNA synthetases class I (I, L, M and V) FIM01_RS20175 PF06827 Zinc finger found in FPG and IleRS FIM01_RS20180 PF01252 Signal peptidase (SPase) II FIM01_RS20185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIM01_RS20225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIM01_RS20230 PF07859 alpha/beta hydrolase fold FIM01_RS20255 PF01025 GrpE FIM01_RS20260 PF00012 Hsp70 protein FIM01_RS20280 PF13406 Transglycosylase SLT domain FIM01_RS20285 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FIM01_RS20285 PF02222 ATP-grasp domain FIM01_RS20290 PF00731 AIR carboxylase FIM01_RS20305 PF08245 Mur ligase middle domain FIM01_RS20305 PF02875 Mur ligase family, glutamate ligase domain FIM01_RS20305 PF01225 Mur ligase family, catalytic domain FIM01_RS20315 PF01569 PAP2 superfamily FIM01_RS20325 PF03741 Integral membrane protein TerC family FIM01_RS20335 PF03738 Glutathionylspermidine synthase preATP-grasp FIM01_RS20340 PF00355 Rieske [2Fe-2S] domain FIM01_RS20345 PF01979 Amidohydrolase family FIM01_RS20350 PF00156 Phosphoribosyl transferase domain FIM01_RS20360 PF13098 Thioredoxin-like domain FIM01_RS20360 PF10411 Disulfide bond isomerase protein N-terminus FIM01_RS20365 PF01545 Cation efflux family FIM01_RS20365 PF16916 Dimerisation domain of Zinc Transporter FIM01_RS20370 PF02583 Metal-sensitive transcriptional repressor FIM01_RS20375 PF10396 GTP-binding protein TrmE N-terminus FIM01_RS20375 PF12631 MnmE helical domain FIM01_RS20375 PF01926 50S ribosome-binding GTPase FIM01_RS20380 PF14849 YidC periplasmic domain FIM01_RS20380 PF02096 60Kd inner membrane protein FIM01_RS20385 PF01809 Putative membrane protein insertion efficiency factor FIM01_RS20390 PF00825 Ribonuclease P FIM01_RS20395 PF00468 Ribosomal protein L34