locus-tag	class	description
FIM01_RS00010	COG0592	DNA-directed DNA polymerase activity
FIM01_RS00020	COG0187	DNA topoisomerase II activity
FIM01_RS00030	COG0586	Pfam SNARE associated Golgi protein
FIM01_RS00035	COG0488	(ABC) transporter
FIM01_RS00060	COG0596	Alpha beta hydrolase
FIM01_RS00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FIM01_RS00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FIM01_RS00115	COG0733	neurotransmitter:sodium symporter activity
FIM01_RS00150	COG0583	DNA-binding transcription factor activity
FIM01_RS00155	COG2233	PERMEase
FIM01_RS00170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_RS00205	COG2814	Major facilitator Superfamily
FIM01_RS00210	COG0656	L-ascorbic acid biosynthetic process
FIM01_RS00215	COG0583	DNA-binding transcription factor activity
FIM01_RS00230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_RS00235	COG1064	alcohol dehydrogenase
FIM01_RS00240	COG2818	Glycosylase
FIM01_RS00255	COG1194	a g-specific adenine glycosylase
FIM01_RS00275	COG2983	Belongs to the UPF0260 family
FIM01_RS00280	COG2133	pyrroloquinoline quinone binding
FIM01_RS00285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FIM01_RS00290	COG2116	formate transmembrane transporter activity
FIM01_RS00310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_RS00315	COG1335	isochorismatase
FIM01_RS00320	COG0385	Bile acid
FIM01_RS00325	COG0534	Mate efflux family protein
FIM01_RS00330	COG1683	Conserved Protein
FIM01_RS00350	COG0625	glutathione transferase activity
FIM01_RS00360	COG1113	amino acid transport
FIM01_RS00370	COG0523	cobalamin synthesis protein
FIM01_RS00380	COG2188	Transcriptional regulator
FIM01_RS00410	COG0010	Belongs to the arginase family
FIM01_RS00425	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FIM01_RS00465	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_RS00495	COG4584	PFAM Integrase catalytic
FIM01_RS00495	COG2390	Transcriptional regulator
FIM01_RS00500	COG1484	DNA-dependent DNA replication
FIM01_RS00530	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
FIM01_RS00565	COG4584	PFAM Integrase catalytic
FIM01_RS00575	COG1484	DNA-dependent DNA replication
FIM01_RS00640	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FIM01_RS00650	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FIM01_RS00655	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FIM01_RS00745	COG0534	Mate efflux family protein
FIM01_RS00750	COG0436	Aminotransferase
FIM01_RS00755	COG2733	membrane
FIM01_RS00770	COG2918	glutathione biosynthetic process
FIM01_RS00785	COG3409	Peptidoglycan-binding domain 1 protein
FIM01_RS00785	COG1388	LysM domain
FIM01_RS00785	COG5632	N-Acetylmuramoyl-L-alanine amidase
FIM01_RS00815	COG3150	esterase
FIM01_RS00825	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FIM01_RS00835	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_RS00845	COG2233	PERMEase
FIM01_RS00850	COG2351	hydroxyisourate hydrolase activity
FIM01_RS00885	COG3706	GGDEF domain
FIM01_RS00900	COG1393	Belongs to the ArsC family
FIM01_RS00905	COG0708	Exodeoxyribonuclease III
FIM01_RS00925	COG0189	ligase activity
FIM01_RS00945	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FIM01_RS00955	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FIM01_RS00970	COG4942	peptidase
FIM01_RS00980	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIM01_RS00990	COG2119	membrane
FIM01_RS00995	COG4774	siderophore transport
FIM01_RS01000	COG0426	domain, Protein
FIM01_RS01000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_RS01025	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FIM01_RS01045	COG1902	pentaerythritol trinitrate reductase activity
FIM01_RS01050	COG1519	Transferase
FIM01_RS01055	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FIM01_RS01060	COG0668	transmembrane transport
FIM01_RS01070	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIM01_RS01075	COG1335	isochorismatase
FIM01_RS01080	COG1522	sequence-specific DNA binding
FIM01_RS01105	COG0784	Response regulator, receiver
FIM01_RS01105	COG2198	Histidine kinase
FIM01_RS01105	COG2205	protein histidine kinase activity
FIM01_RS01110	COG3162	membrane
FIM01_RS01115	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIM01_RS01125	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_RS01140	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FIM01_RS01145	COG1309	transcriptional regulator
FIM01_RS01165	COG0352	thiamine-phosphate diphosphorylase activity
FIM01_RS01165	COG0351	phosphomethylpyrimidine kinase
FIM01_RS01165	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FIM01_RS01175	COG2814	Major facilitator Superfamily
FIM01_RS01190	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FIM01_RS01200	COG1113	amino acid transport
FIM01_RS01210	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIM01_RS01215	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS01225	COG1335	isochorismatase
FIM01_RS01255	COG2814	Major facilitator Superfamily
FIM01_RS01260	COG0583	DNA-binding transcription factor activity
FIM01_RS01280	COG0667	Aldo Keto reductase
FIM01_RS01305	COG1733	regulation of RNA biosynthetic process
FIM01_RS01320	COG1733	regulation of RNA biosynthetic process
FIM01_RS01330	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_RS01340	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIM01_RS01400	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FIM01_RS01440	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FIM01_RS01470	COG0427	acetyl-CoA hydrolase
FIM01_RS01495	COG0659	secondary active sulfate transmembrane transporter activity
FIM01_RS01500	COG4221	oxidoreductase activity
FIM01_RS01505	COG2873	o-acetylhomoserine
FIM01_RS01510	COG0488	(ABC) transporter
FIM01_RS01575	COG0833	amino acid
FIM01_RS01620	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FIM01_RS01625	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FIM01_RS01640	COG2226	methyltransferase
FIM01_RS01690	COG0069	glutamate synthase activity
FIM01_RS01690	COG0067	glutamate synthase
FIM01_RS01690	COG0070	glutamate synthase
FIM01_RS01695	COG0493	'glutamate synthase
FIM01_RS01705	COG1704	LemA family
FIM01_RS01710	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FIM01_RS01725	COG3307	-O-antigen
FIM01_RS01745	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIM01_RS01760	COG0194	GDP metabolic process
FIM01_RS01810	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FIM01_RS01830	COG5380	lipid catabolic process
FIM01_RS01835	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FIM01_RS01860	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FIM01_RS01865	COG0277	FAD linked oxidase domain protein
FIM01_RS01875	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FIM01_RS01880	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_RS01895	COG1289	transmembrane transporter activity
FIM01_RS01910	COG0628	permease
FIM01_RS01915	COG1192	Involved in chromosome partitioning
FIM01_RS01945	COG0833	amino acid
FIM01_RS01950	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FIM01_RS01955	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FIM01_RS01965	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS02005	COG0583	DNA-binding transcription factor activity
FIM01_RS02055	COG0517	IMP dehydrogenase activity
FIM01_RS02060	COG1983	PspC domain protein
FIM01_RS02070	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS02085	COG0408	coproporphyrinogen oxidase activity
FIM01_RS02105	COG0513	Belongs to the DEAD box helicase family
FIM01_RS02115	COG1127	ABC transporter
FIM01_RS02120	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FIM01_RS02130	COG2854	intermembrane phospholipid transfer
FIM01_RS02140	COG0598	Magnesium transport protein CorA
FIM01_RS02150	COG0494	nUDIX hydrolase
FIM01_RS02155	COG1040	competence protein
FIM01_RS02160	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FIM01_RS02180	COG1946	Acyl-CoA thioesterase
FIM01_RS02185	COG1301	dicarboxylic acid transport
FIM01_RS02200	COG1959	2 iron, 2 sulfur cluster binding
FIM01_RS02205	COG1017	nitric oxide dioxygenase activity
FIM01_RS02205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_RS02210	COG0433	COG0433 Predicted ATPase
FIM01_RS02215	COG0626	cystathionine gamma-synthase activity
FIM01_RS02370	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS02375	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FIM01_RS02405	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FIM01_RS02410	COG0339	signal peptide processing
FIM01_RS02415	COG0557	exoribonuclease II activity
FIM01_RS02460	COG0179	Fumarylacetoacetate (FAA) hydrolase
FIM01_RS02465	COG2169	Transcriptional regulator
FIM01_RS02470	COG0697	spore germination
FIM01_RS02475	COG1295	ribonuclease BN
FIM01_RS02510	COG1702	phosphate starvation-inducible protein PhoH
FIM01_RS02520	COG1196	nuclear chromosome segregation
FIM01_RS02520	COG0741	lytic transglycosylase activity
FIM01_RS02520	COG0739	heme binding
FIM01_RS02550	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FIM01_RS02555	COG1183	phosphatidylcholine synthase activity
FIM01_RS02600	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS02605	COG1309	transcriptional regulator
FIM01_RS02620	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FIM01_RS02625	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS02645	COG2969	positive regulation of protein catabolic process
FIM01_RS02655	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FIM01_RS02670	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FIM01_RS02675	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FIM01_RS02695	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FIM01_RS02705	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIM01_RS02710	COG1408	metallophosphoesterase
FIM01_RS02720	COG2199	diguanylate cyclase activity
FIM01_RS02780	COG1607	acyl-coa hydrolase
FIM01_RS02810	COG2350	Protein conserved in bacteria
FIM01_RS02820	COG0613	PHP domain protein
FIM01_RS02825	COG3781	membrane
FIM01_RS02835	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FIM01_RS02850	COG1862	Preprotein translocase
FIM01_RS02880	COG2205	protein histidine kinase activity
FIM01_RS02885	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FIM01_RS02905	COG0726	polysaccharide deacetylase
FIM01_RS02910	COG0463	Glycosyl transferase, family 2
FIM01_RS02915	COG0438	transferase activity, transferring glycosyl groups
FIM01_RS02980	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS02985	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS02995	COG2205	protein histidine kinase activity
FIM01_RS03000	COG0745	RESPONSE REGULATOR receiver
FIM01_RS03005	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FIM01_RS03025	COG2096	Adenosyltransferase
FIM01_RS03075	COG0285	dihydrofolate synthase activity
FIM01_RS03095	COG0450	alkyl hydroperoxide reductase
FIM01_RS03110	COG0477	Major facilitator Superfamily
FIM01_RS03115	COG1272	protein, Hemolysin III
FIM01_RS03125	COG2153	protein acetylation
FIM01_RS03145	COG0183	Belongs to the thiolase family
FIM01_RS03150	COG2207	Transcriptional regulator
FIM01_RS03170	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_RS03190	COG0183	Belongs to the thiolase family
FIM01_RS03200	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FIM01_RS03200	COG2885	chlorophyll binding
FIM01_RS03205	COG1690	Belongs to the RtcB family
FIM01_RS03210	COG0833	amino acid
FIM01_RS03220	COG2233	PERMEase
FIM01_RS03225	COG1217	gtp-binding protein TYPA
FIM01_RS03250	COG2094	Belongs to the DNA glycosylase MPG family
FIM01_RS03255	COG4772	TonB-dependent receptor
FIM01_RS03260	COG1902	pentaerythritol trinitrate reductase activity
FIM01_RS03265	COG0679	Auxin Efflux Carrier
FIM01_RS03275	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIM01_RS03280	COG0354	folic acid binding
FIM01_RS03290	COG3189	MarR family transcriptional regulator
FIM01_RS03295	COG2824	Alkylphosphonate utilization operon protein PhnA
FIM01_RS03300	COG3422	double-strand break repair
FIM01_RS03340	COG0840	transmembrane signaling receptor activity
FIM01_RS03355	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIM01_RS03370	COG5510	response to toxic substance
FIM01_RS03380	COG2832	Protein of unknown function (DUF454)
FIM01_RS03385	COG1376	ErfK ybiS ycfS ynhG family protein
FIM01_RS03425	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FIM01_RS03435	COG1289	transmembrane transporter activity
FIM01_RS03440	COG2814	Major facilitator Superfamily
FIM01_RS03460	COG1115	amino acid carrier protein
FIM01_RS03465	COG1752	Esterase of the alpha-beta hydrolase superfamily
FIM01_RS03470	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FIM01_RS03475	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FIM01_RS03500	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FIM01_RS03510	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FIM01_RS03515	COG1077	Cell shape determining protein MreB Mrl
FIM01_RS03520	COG1792	Involved in formation and maintenance of cell shape
FIM01_RS03525	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FIM01_RS03530	COG0424	maF-like protein
FIM01_RS03535	COG1530	ribonuclease E activity
FIM01_RS03545	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_RS03555	COG0560	Phosphoserine phosphatase
FIM01_RS03565	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_RS03590	COG2207	Transcriptional regulator
FIM01_RS04000	COG0582	viral genome integration into host DNA
FIM01_RS04005	COG0582	viral genome integration into host DNA
FIM01_RS04090	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_RS04310	COG1113	amino acid transport
FIM01_RS04315	COG2828	Protein conserved in bacteria
FIM01_RS04320	COG0142	geranyltranstransferase activity
FIM01_RS04325	COG2315	Protein conserved in bacteria
FIM01_RS04340	COG1752	Esterase of the alpha-beta hydrolase superfamily
FIM01_RS04360	COG2194	sulfuric ester hydrolase activity
FIM01_RS04365	COG0745	RESPONSE REGULATOR receiver
FIM01_RS04370	COG0642	Histidine kinase
FIM01_RS04380	COG0004	ammonium transporteR
FIM01_RS04390	COG0583	DNA-binding transcription factor activity
FIM01_RS04410	COG0525	valine-tRNA ligase activity
FIM01_RS04420	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS04430	COG0393	Putative heavy-metal-binding
FIM01_RS04435	COG0393	Putative heavy-metal-binding
FIM01_RS04440	COG1538	Outer membrane efflux protein
FIM01_RS04450	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_RS04455	COG0671	phosphoesterase, PA-phosphatase related
FIM01_RS04485	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FIM01_RS04500	COG1648	precorrin-2 dehydrogenase activity
FIM01_RS04500	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FIM01_RS04505	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FIM01_RS04510	COG1733	regulation of RNA biosynthetic process
FIM01_RS04520	COG0531	amino acid
FIM01_RS04535	COG0321	lipoyl(octanoyl) transferase activity
FIM01_RS04540	COG2921	Belongs to the UPF0250 family
FIM01_RS04575	COG2009	succinate dehydrogenase
FIM01_RS04580	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FIM01_RS04585	COG1053	succinate dehydrogenase
FIM01_RS04590	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FIM01_RS04615	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIM01_RS04650	COG2354	Protein conserved in bacteria
FIM01_RS04655	COG2321	neutral zinc metallopeptidase
FIM01_RS04675	COG2843	Capsule synthesis protein
FIM01_RS04690	COG0589	response to stress
FIM01_RS04710	COG0505	Belongs to the CarA family
FIM01_RS04735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FIM01_RS04740	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FIM01_RS04790	COG0477	Major facilitator Superfamily
FIM01_RS04795	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FIM01_RS04810	COG1597	lipid kinase activity
FIM01_RS04815	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FIM01_RS04840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_RS04845	COG0584	glycerophosphoryl diester phosphodiesterase
FIM01_RS04865	COG0741	lytic transglycosylase activity
FIM01_RS04890	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIM01_RS04905	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_RS04945	COG0778	Nitroreductase
FIM01_RS04960	COG1929	Belongs to the glycerate kinase type-1 family
FIM01_RS04965	COG0243	molybdopterin cofactor binding
FIM01_RS04970	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FIM01_RS04975	COG3339	Conserved Protein
FIM01_RS04985	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FIM01_RS05000	COG1113	amino acid transport
FIM01_RS05010	COG0019	diaminopimelate decarboxylase activity
FIM01_RS05020	COG2267	carboxylic ester hydrolase activity
FIM01_RS05025	COG1280	lysine exporter protein (LysE YggA)
FIM01_RS05030	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FIM01_RS05060	COG0463	Glycosyl transferase, family 2
FIM01_RS05080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_RS05110	COG4591	ABC-type transport system involved in lipoprotein release permease component
FIM01_RS05115	COG1136	(ABC) transporter
FIM01_RS05120	COG2333	competence protein COMEC
FIM01_RS05120	COG0658	competence protein
FIM01_RS05130	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FIM01_RS05130	COG0616	signal peptide processing
FIM01_RS05135	COG0596	Alpha beta hydrolase
FIM01_RS05140	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FIM01_RS05150	COG0628	permease
FIM01_RS05185	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIM01_RS05225	COG0824	Thioesterase
FIM01_RS05230	COG1473	amidohydrolase
FIM01_RS05250	COG0047	phosphoribosylformylglycinamidine synthase activity
FIM01_RS05250	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FIM01_RS05255	COG2814	Major facilitator Superfamily
FIM01_RS05265	COG1024	Enoyl-CoA hydratase
FIM01_RS05270	COG1051	belongs to the nudix hydrolase family
FIM01_RS05270	COG1056	cytidyltransferase-related domain
FIM01_RS05280	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FIM01_RS05295	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FIM01_RS05310	COG4625	pathogenesis
FIM01_RS05315	COG0583	DNA-binding transcription factor activity
FIM01_RS05320	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FIM01_RS05325	COG4208	sulfate ABC transporter
FIM01_RS05330	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FIM01_RS05340	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FIM01_RS05345	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FIM01_RS05350	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FIM01_RS05370	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIM01_RS05385	COG0681	Belongs to the peptidase S26 family
FIM01_RS05400	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FIM01_RS05410	COG1381	Involved in DNA repair and RecF pathway recombination
FIM01_RS05415	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FIM01_RS05425	COG4221	oxidoreductase activity
FIM01_RS05455	COG0436	Aminotransferase
FIM01_RS05475	COG0556	nucleotide-excision repair
FIM01_RS05530	COG2070	2-Nitropropane dioxygenase
FIM01_RS05575	COG0415	Belongs to the DNA photolyase family
FIM01_RS05585	COG1252	NADH dehydrogenase
FIM01_RS05590	COG1686	Belongs to the peptidase S11 family
FIM01_RS05605	COG1187	pseudouridine synthase activity
FIM01_RS05630	COG0477	Major facilitator Superfamily
FIM01_RS05635	COG0583	DNA-binding transcription factor activity
FIM01_RS05640	COG1823	symporter activity
FIM01_RS05650	COG0612	Peptidase, M16
FIM01_RS05680	COG1203	CRISPR-associated helicase, Cas3
FIM01_RS05705	COG0352	thiamine-phosphate diphosphorylase activity
FIM01_RS05740	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_RS05755	COG1309	transcriptional regulator
FIM01_RS05765	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIM01_RS05770	COG0076	glutamate decarboxylase activity
FIM01_RS05780	COG1522	sequence-specific DNA binding
FIM01_RS05785	COG3961	Belongs to the TPP enzyme family
FIM01_RS05790	COG1113	amino acid transport
FIM01_RS05795	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIM01_RS05800	COG0573	inorganic phosphate transmembrane transporter activity
FIM01_RS05810	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FIM01_RS05815	COG0616	signal peptide processing
FIM01_RS05850	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FIM01_RS05855	COG1686	Belongs to the peptidase S11 family
FIM01_RS05880	COG0583	DNA-binding transcription factor activity
FIM01_RS05885	COG1067	ATP-dependent peptidase activity
FIM01_RS05910	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FIM01_RS05930	COG1966	Carbon starvation protein
FIM01_RS05935	COG2879	small protein
FIM01_RS05945	COG0583	DNA-binding transcription factor activity
FIM01_RS05950	COG0006	proline dipeptidase activity
FIM01_RS05955	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_RS05960	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_RS05970	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS05975	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_RS05980	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIM01_RS05980	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FIM01_RS06035	COG1741	Belongs to the pirin family
FIM01_RS06045	COG2964	Protein conserved in bacteria
FIM01_RS06060	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_RS06065	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIM01_RS06070	COG4605	iron ion homeostasis
FIM01_RS06075	COG4604	ABC transporter, ATP-binding protein
FIM01_RS06080	COG4607	ABC-type enterochelin transport system periplasmic component
FIM01_RS06085	COG4774	siderophore transport
FIM01_RS06095	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_RS06100	COG1021	2,3-dihydroxybenzoate-AMP ligase
FIM01_RS06105	COG3433	isochorismatase activity
FIM01_RS06105	COG1535	isochorismatase
FIM01_RS06120	COG1132	(ABC) transporter
FIM01_RS06125	COG1132	(ABC) transporter
FIM01_RS06130	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
FIM01_RS06140	COG1169	isochorismate synthase
FIM01_RS06155	COG3739	integral membrane protein
FIM01_RS06180	COG0302	gtp cyclohydrolase
FIM01_RS06190	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FIM01_RS06220	COG0308	aminopeptidase N
FIM01_RS06225	COG0512	Glutamine amidotransferase of anthranilate synthase
FIM01_RS06240	COG0174	glutamine synthetase
FIM01_RS06250	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FIM01_RS06285	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FIM01_RS06290	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FIM01_RS06295	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIM01_RS06315	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FIM01_RS06320	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FIM01_RS06325	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FIM01_RS06340	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS06345	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FIM01_RS06350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIM01_RS06360	COG2223	nitrite transmembrane transporter activity
FIM01_RS06370	COG0024	Methionine aminopeptidase
FIM01_RS06375	COG0052	Belongs to the universal ribosomal protein uS2 family
FIM01_RS06390	COG2207	Transcriptional regulator
FIM01_RS06415	COG2951	lytic endotransglycosylase activity
FIM01_RS06420	COG0772	Belongs to the SEDS family
FIM01_RS06435	COG0842	Transport permease protein
FIM01_RS06440	COG1131	(ABC) transporter
FIM01_RS06445	COG0582	viral genome integration into host DNA
FIM01_RS06485	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_RS06550	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_RS06645	COG5410	chromosome segregation
FIM01_RS06770	COG0739	heme binding
FIM01_RS06875	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_RS06890	COG4215	(ABC) transporter
FIM01_RS06895	COG4160	amino acid transport
FIM01_RS06910	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIM01_RS06915	COG0826	peptidase U32
FIM01_RS06920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_RS06935	COG1720	tRNA m6t6A37 methyltransferase activity
FIM01_RS06945	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIM01_RS06960	COG0642	Histidine kinase
FIM01_RS06970	COG0494	nUDIX hydrolase
FIM01_RS06980	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FIM01_RS06985	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FIM01_RS06990	COG3139	Protein of unknown function (DUF1315)
FIM01_RS06995	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FIM01_RS07005	COG1301	dicarboxylic acid transport
FIM01_RS07010	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS07015	COG2819	hydrolase of the alpha beta superfamily
FIM01_RS07025	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FIM01_RS07035	COG2195	Cleaves the N-terminal amino acid of tripeptides
FIM01_RS07040	COG1234	tRNA 3'-trailer cleavage
FIM01_RS07065	COG2363	Small membrane protein
FIM01_RS07085	COG0513	Belongs to the DEAD box helicase family
FIM01_RS07095	COG0778	Nitroreductase
FIM01_RS07190	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_RS07290	COG5410	chromosome segregation
FIM01_RS07420	COG0739	heme binding
FIM01_RS07500	COG1286	toxin biosynthetic process
FIM01_RS07525	COG4783	chaperone-mediated protein folding
FIM01_RS07530	COG1610	YqeY-like protein
FIM01_RS07630	COG3111	PFAM Bacterial OB fold (BOF) protein
FIM01_RS07655	COG3243	poly(R)-hydroxyalkanoic acid synthase
FIM01_RS07660	COG0786	glutamate:sodium symporter activity
FIM01_RS07670	COG0583	DNA-binding transcription factor activity
FIM01_RS07680	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS07695	COG2186	Transcriptional regulator
FIM01_RS07755	COG0477	Major facilitator Superfamily
FIM01_RS07780	COG2995	paraquat-inducible protein a
FIM01_RS07785	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FIM01_RS07785	COG3008	intermembrane lipid transfer
FIM01_RS07795	COG2351	hydroxyisourate hydrolase activity
FIM01_RS07835	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FIM01_RS07845	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FIM01_RS07850	COG0642	Histidine kinase
FIM01_RS07855	COG0745	RESPONSE REGULATOR receiver
FIM01_RS07875	COG1794	racemase activity, acting on amino acids and derivatives
FIM01_RS07905	COG1301	dicarboxylic acid transport
FIM01_RS07915	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_RS07920	COG2011	ABC-type metal ion transport system permease component
FIM01_RS07925	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FIM01_RS07930	COG1464	Belongs to the NlpA lipoprotein family
FIM01_RS07935	COG0151	Belongs to the GarS family
FIM01_RS07940	COG0138	bifunctional purine biosynthesis protein purh
FIM01_RS07945	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FIM01_RS07975	COG2308	Evidence 4 Homologs of previously reported genes of
FIM01_RS07985	COG1305	Transglutaminase-like
FIM01_RS07995	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FIM01_RS08000	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_RS08025	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FIM01_RS08035	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FIM01_RS08040	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FIM01_RS08065	COG0726	polysaccharide deacetylase
FIM01_RS08065	COG1649	PFAM Uncharacterised BCR, COG1649
FIM01_RS08070	COG1215	transferase activity, transferring glycosyl groups
FIM01_RS08075	COG3658	cytochrome
FIM01_RS08085	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FIM01_RS08105	COG0583	DNA-binding transcription factor activity
FIM01_RS08125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_RS08130	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_RS08145	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS08150	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIM01_RS08155	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_RS08180	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FIM01_RS08185	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FIM01_RS08195	COG2205	protein histidine kinase activity
FIM01_RS08200	COG0745	RESPONSE REGULATOR receiver
FIM01_RS08205	COG0174	glutamine synthetase
FIM01_RS08225	COG0729	surface antigen
FIM01_RS08255	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIM01_RS08260	COG2814	Major facilitator Superfamily
FIM01_RS08275	COG0583	DNA-binding transcription factor activity
FIM01_RS08290	COG1187	pseudouridine synthase activity
FIM01_RS08310	COG0802	atpase or kinase
FIM01_RS08315	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FIM01_RS08325	COG1923	regulation of RNA biosynthetic process
FIM01_RS08330	COG0697	spore germination
FIM01_RS08355	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FIM01_RS08360	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FIM01_RS08360	COG0519	Catalyzes the synthesis of GMP from XMP
FIM01_RS08365	COG4302	ethanolamine ammonia-lyase activity
FIM01_RS08370	COG4303	Ethanolamine ammonia lyase large subunit
FIM01_RS08375	COG0531	amino acid
FIM01_RS08395	COG1454	alcohol dehydrogenase
FIM01_RS08400	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FIM01_RS08425	COG0308	aminopeptidase N
FIM01_RS08465	COG1605	Chorismate mutase
FIM01_RS08485	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FIM01_RS08505	COG1309	transcriptional regulator
FIM01_RS08515	COG0668	transmembrane transport
FIM01_RS08545	COG4773	Receptor
FIM01_RS08565	COG0488	(ABC) transporter
FIM01_RS08570	COG0589	response to stress
FIM01_RS08585	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FIM01_RS08600	COG1522	sequence-specific DNA binding
FIM01_RS08610	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FIM01_RS08615	COG0583	DNA-binding transcription factor activity
FIM01_RS08625	COG0183	Belongs to the thiolase family
FIM01_RS08635	COG2030	dehydratase
FIM01_RS08640	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FIM01_RS08655	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FIM01_RS08665	COG0824	Thioesterase
FIM01_RS08670	COG1454	alcohol dehydrogenase
FIM01_RS08680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FIM01_RS08700	COG0069	glutamate synthase activity
FIM01_RS08720	COG2814	Major facilitator Superfamily
FIM01_RS08735	COG0511	ligase activity, forming carbon-carbon bonds
FIM01_RS08755	COG1116	anion transmembrane transporter activity
FIM01_RS08755	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_RS08760	COG0745	RESPONSE REGULATOR receiver
FIM01_RS08770	COG2146	nitrite reductase [NAD(P)H] activity
FIM01_RS08770	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_RS08775	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_RS08780	COG0243	molybdopterin cofactor binding
FIM01_RS08790	COG0243	molybdopterin cofactor binding
FIM01_RS08795	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FIM01_RS08810	COG0315	cyclic pyranopterin monophosphate synthase activity
FIM01_RS08810	COG0521	Mo-molybdopterin cofactor biosynthetic process
FIM01_RS08815	COG0303	'Molybdopterin
FIM01_RS08830	COG0697	spore germination
FIM01_RS08850	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FIM01_RS08855	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FIM01_RS08915	COG2204	response regulator
FIM01_RS08920	COG3852	Histidine kinase
FIM01_RS08945	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FIM01_RS08950	COG0575	Belongs to the CDS family
FIM01_RS08985	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIM01_RS09000	COG2137	regulation of response to DNA damage stimulus
FIM01_RS09010	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FIM01_RS09015	COG1011	Hydrolase
FIM01_RS09040	COG1522	sequence-specific DNA binding
FIM01_RS09050	COG1113	amino acid transport
FIM01_RS09065	COG0659	secondary active sulfate transmembrane transporter activity
FIM01_RS09070	COG2135	peptidase activity
FIM01_RS09085	COG3300	MHYT domain
FIM01_RS09085	COG5001	Diguanylate cyclase
FIM01_RS09105	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FIM01_RS09105	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIM01_RS09105	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIM01_RS09110	COG1105	Belongs to the carbohydrate kinase PfkB family
FIM01_RS09115	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIM01_RS09115	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FIM01_RS09150	COG0024	Methionine aminopeptidase
FIM01_RS09155	COG0583	DNA-binding transcription factor activity
FIM01_RS09165	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FIM01_RS09170	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FIM01_RS09175	COG0516	GMP reductase activity
FIM01_RS09175	COG0517	IMP dehydrogenase activity
FIM01_RS09200	COG0552	protein localization to endoplasmic reticulum
FIM01_RS09210	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FIM01_RS09220	COG4890	Cyd operon protein YbgT
FIM01_RS09225	COG1294	oxidase, subunit
FIM01_RS09245	COG1585	Membrane protein implicated in regulation of membrane protease activity
FIM01_RS09255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIM01_RS09260	COG4774	siderophore transport
FIM01_RS09275	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIM01_RS09280	COG0569	domain protein
FIM01_RS09285	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FIM01_RS09315	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FIM01_RS09320	COG0542	response to heat
FIM01_RS09345	COG1902	pentaerythritol trinitrate reductase activity
FIM01_RS09345	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_RS09390	COG2323	membrane
FIM01_RS09395	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FIM01_RS09405	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FIM01_RS09410	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FIM01_RS09415	COG0183	Belongs to the thiolase family
FIM01_RS09420	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FIM01_RS09425	COG0596	Alpha beta hydrolase
FIM01_RS09430	COG2271	Major facilitator Superfamily
FIM01_RS09435	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIM01_RS09440	COG3485	protocatechuate 3,4-dioxygenase
FIM01_RS09445	COG3485	protocatechuate 3,4-dioxygenase
FIM01_RS09450	COG0710	3-dehydroquinate dehydratase activity
FIM01_RS09455	COG3420	alginic acid biosynthetic process
FIM01_RS09460	COG3659	wide pore channel activity
FIM01_RS09465	COG4993	Dehydrogenase
FIM01_RS09475	COG2391	methyltransferase activity
FIM01_RS09490	COG1414	Transcriptional regulator
FIM01_RS09495	COG0583	DNA-binding transcription factor activity
FIM01_RS09500	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS09525	COG2814	Major facilitator Superfamily
FIM01_RS09535	COG0154	amidase activity
FIM01_RS09555	COG4638	Rieske (2fe-2S)
FIM01_RS09565	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS09575	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_RS09585	COG3733	amine oxidase
FIM01_RS09595	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS09605	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FIM01_RS09610	COG0183	Belongs to the thiolase family
FIM01_RS09620	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FIM01_RS09625	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FIM01_RS09635	COG4829	muconolactone delta-isomerase
FIM01_RS09640	COG4948	Mandelate Racemase Muconate Lactonizing
FIM01_RS09645	COG0583	DNA-binding transcription factor activity
FIM01_RS09655	COG2186	Transcriptional regulator
FIM01_RS09675	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS09690	COG1902	pentaerythritol trinitrate reductase activity
FIM01_RS09690	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_RS09730	COG1309	transcriptional regulator
FIM01_RS09740	COG4221	oxidoreductase activity
FIM01_RS09745	COG4689	acetoacetate decarboxylase
FIM01_RS09755	COG1902	pentaerythritol trinitrate reductase activity
FIM01_RS09775	COG1335	isochorismatase
FIM01_RS09780	COG0583	DNA-binding transcription factor activity
FIM01_RS09790	COG0475	glutathione-regulated potassium exporter activity
FIM01_RS09790	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIM01_RS09800	COG1473	amidohydrolase
FIM01_RS09870	COG2188	Transcriptional regulator
FIM01_RS09885	COG0583	DNA-binding transcription factor activity
FIM01_RS09900	COG1566	PFAM secretion protein HlyD family protein
FIM01_RS09915	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS09920	COG0129	dihydroxy-acid dehydratase activity
FIM01_RS09930	COG0583	DNA-binding transcription factor activity
FIM01_RS09935	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FIM01_RS09945	COG2084	Dehydrogenase
FIM01_RS09960	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FIM01_RS10020	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FIM01_RS10035	COG0556	nucleotide-excision repair
FIM01_RS10075	COG1073	alpha beta
FIM01_RS10085	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS10100	COG2207	Transcriptional regulator
FIM01_RS10110	COG2205	protein histidine kinase activity
FIM01_RS10115	COG0745	RESPONSE REGULATOR receiver
FIM01_RS10120	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_RS10125	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIM01_RS10130	COG1538	Outer membrane efflux protein
FIM01_RS10140	COG2072	flavoprotein involved in K transport
FIM01_RS10150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIM01_RS10420	COG3539	Fimbrial protein
FIM01_RS10445	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FIM01_RS10455	COG0753	catalase activity
FIM01_RS10470	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIM01_RS10535	COG3433	isochorismatase activity
FIM01_RS10535	COG1535	isochorismatase
FIM01_RS10540	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS10545	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FIM01_RS10550	COG4149	molybdate abc transporter
FIM01_RS10555	COG0725	ABC transporter, periplasmic molybdate-binding protein
FIM01_RS10565	COG4638	Rieske (2fe-2S)
FIM01_RS10570	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FIM01_RS10575	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_RS10575	COG0543	2 iron, 2 sulfur cluster binding
FIM01_RS10595	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_RS10605	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS10620	COG2207	Transcriptional regulator
FIM01_RS10625	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS10630	COG2610	gluconate transmembrane transporter activity
FIM01_RS10640	COG0583	DNA-binding transcription factor activity
FIM01_RS10655	COG2031	fatty acid transporter
FIM01_RS10660	COG0183	Belongs to the thiolase family
FIM01_RS10665	COG0583	DNA-binding transcription factor activity
FIM01_RS10670	COG0583	DNA-binding transcription factor activity
FIM01_RS10685	COG1027	Aspartate ammonia-lyase
FIM01_RS10695	COG0477	Major facilitator Superfamily
FIM01_RS10715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_RS10720	COG4521	taurine ABC transporter
FIM01_RS10735	COG2188	Transcriptional regulator
FIM01_RS10745	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FIM01_RS10750	COG1733	regulation of RNA biosynthetic process
FIM01_RS10755	COG2207	Transcriptional regulator
FIM01_RS10755	COG3708	Transcriptional regulator
FIM01_RS10770	COG0730	response to heat
FIM01_RS10780	COG3453	Protein conserved in bacteria
FIM01_RS10780	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_RS10790	COG3781	membrane
FIM01_RS10795	COG1063	alcohol dehydrogenase
FIM01_RS10805	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIM01_RS10810	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIM01_RS10815	COG0022	dehydrogenase e1 component
FIM01_RS10820	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FIM01_RS10825	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FIM01_RS10840	COG3706	GGDEF domain
FIM01_RS10855	COG0133	tryptophan synthase activity
FIM01_RS10865	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FIM01_RS10900	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FIM01_RS10925	COG2226	methyltransferase
FIM01_RS10980	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIM01_RS10985	COG4773	Receptor
FIM01_RS11005	COG0730	response to heat
FIM01_RS11010	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIM01_RS11025	COG0406	alpha-ribazole phosphatase activity
FIM01_RS11030	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FIM01_RS11045	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIM01_RS11075	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIM01_RS11085	COG4264	IucA IucC family
FIM01_RS11090	COG4264	IucA IucC family
FIM01_RS11110	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FIM01_RS11125	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS11130	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS11135	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIM01_RS11140	COG2207	Transcriptional regulator
FIM01_RS11145	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIM01_RS11150	COG0776	regulation of translation
FIM01_RS11175	COG0822	iron-sulfur transferase activity
FIM01_RS11180	COG0316	Belongs to the HesB IscA family
FIM01_RS11210	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FIM01_RS11230	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIM01_RS11235	COG0702	epimerase
FIM01_RS11270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIM01_RS11280	COG0339	signal peptide processing
FIM01_RS11300	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FIM01_RS11325	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FIM01_RS11330	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FIM01_RS11360	COG0776	regulation of translation
FIM01_RS11425	COG0084	hydrolase, TatD family'
FIM01_RS11445	COG1663	tetraacyldisaccharide 4'-kinase activity
FIM01_RS11450	COG1132	(ABC) transporter
FIM01_RS11460	COG0811	peptide transport
FIM01_RS11465	COG1475	DNA binding
FIM01_RS11470	COG1192	Involved in chromosome partitioning
FIM01_RS11480	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FIM01_RS11495	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIM01_RS11500	COG0191	fructose-bisphosphate aldolase activity
FIM01_RS11520	COG0424	maF-like protein
FIM01_RS11525	COG2850	peptidyl-arginine hydroxylation
FIM01_RS11535	COG0640	Transcriptional regulator
FIM01_RS11545	COG3619	membrane
FIM01_RS11550	COG3122	Protein conserved in bacteria
FIM01_RS11555	COG1132	(ABC) transporter
FIM01_RS11575	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FIM01_RS11580	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIM01_RS11590	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FIM01_RS11590	COG0506	proline dehydrogenase activity
FIM01_RS11590	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FIM01_RS11595	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FIM01_RS11610	COG3698	Phosphodiester glycosidase
FIM01_RS11620	COG2353	YceI-like domain
FIM01_RS11630	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FIM01_RS11675	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FIM01_RS11675	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FIM01_RS11700	COG3539	Fimbrial protein
FIM01_RS11705	COG3121	Chaperone
FIM01_RS11735	COG0697	spore germination
FIM01_RS11745	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FIM01_RS11755	COG0583	DNA-binding transcription factor activity
FIM01_RS11775	COG1309	transcriptional regulator
FIM01_RS11790	COG1522	sequence-specific DNA binding
FIM01_RS11800	COG1126	abc transporter atp-binding protein
FIM01_RS11805	COG0765	amino acid transport
FIM01_RS11810	COG0765	amino acid transport
FIM01_RS11840	COG1464	Belongs to the NlpA lipoprotein family
FIM01_RS11850	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FIM01_RS11855	COG2011	ABC-type metal ion transport system permease component
FIM01_RS11860	COG0012	GTP binding
FIM01_RS11885	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FIM01_RS11925	COG0386	Belongs to the glutathione peroxidase family
FIM01_RS11935	COG0436	Aminotransferase
FIM01_RS11940	COG1301	dicarboxylic acid transport
FIM01_RS11975	COG3634	alkyl hydroperoxide reductase activity
FIM01_RS11990	COG0583	DNA-binding transcription factor activity
FIM01_RS11995	COG0798	PFAM Bile acid sodium symporter
FIM01_RS12000	COG0640	Transcriptional regulator
FIM01_RS12015	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FIM01_RS12025	COG0583	DNA-binding transcription factor activity
FIM01_RS12035	COG1953	Uracil, thiamine, allantoin
FIM01_RS12045	COG2175	clavaminate synthase activity
FIM01_RS12050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_RS12055	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FIM01_RS12060	COG4521	taurine ABC transporter
FIM01_RS12070	COG0477	Major facilitator Superfamily
FIM01_RS12095	COG1271	oxidase subunit
FIM01_RS12100	COG1294	oxidase, subunit
FIM01_RS12110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_RS12130	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FIM01_RS12150	COG3052	prosthetic group binding
FIM01_RS12155	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
FIM01_RS12165	COG2814	Major facilitator Superfamily
FIM01_RS12180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_RS12185	COG1346	cytolysis
FIM01_RS12195	COG0583	DNA-binding transcription factor activity
FIM01_RS12200	COG0625	glutathione transferase activity
FIM01_RS12205	COG0625	glutathione transferase activity
FIM01_RS12210	COG0583	DNA-binding transcription factor activity
FIM01_RS12225	COG1045	serine acetyltransferase
FIM01_RS12230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIM01_RS12235	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FIM01_RS12240	COG1280	lysine exporter protein (LysE YggA)
FIM01_RS12250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIM01_RS12255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIM01_RS12260	COG1126	abc transporter atp-binding protein
FIM01_RS12265	COG0765	amino acid transport
FIM01_RS12270	COG0765	amino acid transport
FIM01_RS12290	COG2205	protein histidine kinase activity
FIM01_RS12290	COG0784	Response regulator, receiver
FIM01_RS12330	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS12375	COG0583	DNA-binding transcription factor activity
FIM01_RS12395	COG0318	PFAM AMP-dependent synthetase and ligase
FIM01_RS12400	COG1309	transcriptional regulator
FIM01_RS12405	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS12410	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FIM01_RS12415	COG1024	Enoyl-CoA hydratase
FIM01_RS12420	COG4770	biotin carboxylase activity
FIM01_RS12430	COG0583	DNA-binding transcription factor activity
FIM01_RS12445	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS12455	COG2814	Major facilitator Superfamily
FIM01_RS12465	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FIM01_RS12470	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FIM01_RS12475	COG2814	Major facilitator Superfamily
FIM01_RS12480	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS12485	COG1024	Enoyl-CoA hydratase
FIM01_RS12490	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS12495	COG1250	3-hydroxyacyl-CoA dehydrogenase
FIM01_RS12500	COG0183	Belongs to the thiolase family
FIM01_RS12510	COG2814	Major facilitator Superfamily
FIM01_RS12520	COG1024	Enoyl-CoA hydratase
FIM01_RS12530	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FIM01_RS12535	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS12540	COG2814	Major facilitator Superfamily
FIM01_RS12545	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIM01_RS12550	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FIM01_RS12565	COG3842	ATPase activity
FIM01_RS12570	COG1840	ABC-type Fe3 transport system, periplasmic component
FIM01_RS12580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_RS12585	COG1414	Transcriptional regulator
FIM01_RS12595	COG0583	DNA-binding transcription factor activity
FIM01_RS12600	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIM01_RS12605	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS12615	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FIM01_RS12625	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS12630	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FIM01_RS12635	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_RS12640	COG2267	carboxylic ester hydrolase activity
FIM01_RS12660	COG3038	cytochrome b561
FIM01_RS12665	COG0753	catalase activity
FIM01_RS12670	COG2271	Major facilitator Superfamily
FIM01_RS12675	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FIM01_RS12680	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FIM01_RS12710	COG1278	Cold shock
FIM01_RS12750	COG0210	DNA helicase
FIM01_RS12755	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FIM01_RS12760	COG2050	protein possibly involved in aromatic compounds catabolism
FIM01_RS12770	COG3327	negative regulation of DNA-templated transcription, initiation
FIM01_RS12775	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
FIM01_RS12780	COG0183	Belongs to the thiolase family
FIM01_RS12785	COG1250	3-hydroxyacyl-CoA dehydrogenase
FIM01_RS12790	COG1024	Enoyl-CoA hydratase
FIM01_RS12795	COG1024	Enoyl-CoA hydratase
FIM01_RS12800	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_RS12805	COG2151	metal-sulfur cluster biosynthetic enzyme
FIM01_RS12810	COG3396	Phenylacetate-CoA oxygenase
FIM01_RS12815	COG3460	Phenylacetate-CoA oxygenase
FIM01_RS12820	COG3396	Phenylacetate-CoA oxygenase
FIM01_RS12825	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS12825	COG2030	dehydratase
FIM01_RS12830	COG1760	l-serine dehydratase
FIM01_RS12835	COG0531	amino acid
FIM01_RS12840	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS12865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIM01_RS12885	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_RS12900	COG0789	Transcriptional regulator
FIM01_RS12910	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FIM01_RS12925	COG2807	transmembrane transport
FIM01_RS12930	COG0590	tRNA wobble adenosine to inosine editing
FIM01_RS13050	COG1116	anion transmembrane transporter activity
FIM01_RS13055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIM01_RS13065	COG0864	Transcriptional regulator
FIM01_RS13075	COG1733	regulation of RNA biosynthetic process
FIM01_RS13080	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_RS13085	COG0439	Biotin carboxylase
FIM01_RS13100	COG1063	alcohol dehydrogenase
FIM01_RS13110	COG1309	transcriptional regulator
FIM01_RS13140	COG0038	chloride channel
FIM01_RS13145	COG4770	biotin carboxylase activity
FIM01_RS13165	COG1914	H( )-stimulated, divalent metal cation uptake system
FIM01_RS13170	COG0583	DNA-binding transcription factor activity
FIM01_RS13190	COG3209	COG3209 Rhs family protein
FIM01_RS13240	COG1250	3-hydroxyacyl-CoA dehydrogenase
FIM01_RS13260	COG2814	Major facilitator Superfamily
FIM01_RS13275	COG1560	Kdo2-lipid A biosynthetic process
FIM01_RS13285	COG5006	permease, DMT superfamily
FIM01_RS13290	COG1522	sequence-specific DNA binding
FIM01_RS13305	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FIM01_RS13315	COG4122	O-methyltransferase activity
FIM01_RS13350	COG1137	ATPase activity
FIM01_RS13355	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FIM01_RS13365	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FIM01_RS13425	COG5434	Belongs to the glycosyl hydrolase 28 family
FIM01_RS13465	COG5410	chromosome segregation
FIM01_RS13540	COG2814	Major facilitator Superfamily
FIM01_RS13580	COG1278	Cold shock
FIM01_RS13585	COG1280	lysine exporter protein (LysE YggA)
FIM01_RS13620	COG1570	exodeoxyribonuclease VII activity
FIM01_RS13675	COG0583	DNA-binding transcription factor activity
FIM01_RS13680	COG4638	Rieske (2fe-2S)
FIM01_RS13685	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FIM01_RS13690	COG0633	Ferredoxin
FIM01_RS13690	COG0543	2 iron, 2 sulfur cluster binding
FIM01_RS13695	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS13700	COG3135	benzoate transporter
FIM01_RS13705	COG2814	Major facilitator Superfamily
FIM01_RS13720	COG1643	Atp-dependent helicase
FIM01_RS13725	COG0450	alkyl hydroperoxide reductase
FIM01_RS13735	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FIM01_RS13745	COG3634	alkyl hydroperoxide reductase activity
FIM01_RS13765	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FIM01_RS13770	COG0625	glutathione transferase activity
FIM01_RS13780	COG2885	chlorophyll binding
FIM01_RS13815	COG0542	response to heat
FIM01_RS13830	COG1765	OsmC-like protein
FIM01_RS13840	COG0667	Aldo Keto reductase
FIM01_RS13855	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FIM01_RS13865	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIM01_RS13875	COG0527	aspartate kinase activity
FIM01_RS13885	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FIM01_RS13895	COG3038	cytochrome b561
FIM01_RS13900	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FIM01_RS13905	COG2252	PERMEase
FIM01_RS13915	COG2072	flavoprotein involved in K transport
FIM01_RS13930	COG1741	Belongs to the pirin family
FIM01_RS13935	COG1309	transcriptional regulator
FIM01_RS13945	COG0300	oxidoreductase activity
FIM01_RS13950	COG2072	flavoprotein involved in K transport
FIM01_RS13955	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FIM01_RS14000	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_RS14015	COG2814	Major facilitator Superfamily
FIM01_RS14020	COG1024	Enoyl-CoA hydratase
FIM01_RS14025	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS14035	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS14060	COG2186	Transcriptional regulator
FIM01_RS14065	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS14075	COG4948	Mandelate Racemase Muconate Lactonizing
FIM01_RS14080	COG2271	Major facilitator Superfamily
FIM01_RS14085	COG2721	sulfolactate sulfo-lyase activity
FIM01_RS14090	COG0697	spore germination
FIM01_RS14120	COG1113	amino acid transport
FIM01_RS14140	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS14160	COG0531	amino acid
FIM01_RS14170	COG1113	amino acid transport
FIM01_RS14210	COG3209	COG3209 Rhs family protein
FIM01_RS14255	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_RS14255	COG1902	pentaerythritol trinitrate reductase activity
FIM01_RS14265	COG2203	Gaf domain
FIM01_RS14265	COG3706	GGDEF domain
FIM01_RS14265	COG4251	negative regulation of phosphorylation
FIM01_RS14265	COG5001	Diguanylate cyclase
FIM01_RS14275	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_RS14330	COG4172	Belongs to the ABC transporter superfamily
FIM01_RS14335	COG4239	(ABC) transporter, permease
FIM01_RS14340	COG4174	ABC transporter (Permease)
FIM01_RS14350	COG1388	LysM domain
FIM01_RS14350	COG1388	LysM domain
FIM01_RS14350	COG0741	lytic transglycosylase activity
FIM01_RS14350	COG0741	lytic transglycosylase activity
FIM01_RS14355	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_RS14395	COG0583	DNA-binding transcription factor activity
FIM01_RS14400	COG1279	arginine transmembrane transporter activity
FIM01_RS14420	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_RS14425	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_RS14430	COG0006	proline dipeptidase activity
FIM01_RS14470	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FIM01_RS14490	COG3384	dioxygenase
FIM01_RS14500	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FIM01_RS14505	COG2878	Part of a membrane complex involved in electron transport
FIM01_RS14510	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FIM01_RS14535	COG0768	penicillin binding
FIM01_RS14540	COG0742	ribosomal rna small subunit methyltransferase
FIM01_RS14555	COG0830	nickel cation binding
FIM01_RS14565	COG0804	urea catabolic process
FIM01_RS14605	COG1253	flavin adenine dinucleotide binding
FIM01_RS14615	COG2851	Citrate transporter
FIM01_RS14665	COG1773	rubredoxin
FIM01_RS14670	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_RS14680	COG0583	DNA-binding transcription factor activity
FIM01_RS14710	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FIM01_RS14715	COG4181	ATPase activity
FIM01_RS14760	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FIM01_RS14780	COG0306	phosphate transporter
FIM01_RS14790	COG3958	Transketolase
FIM01_RS14795	COG3959	Transketolase, thiamine diphosphate binding domain
FIM01_RS14800	COG2271	Major facilitator Superfamily
FIM01_RS14805	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS14810	COG0583	DNA-binding transcription factor activity
FIM01_RS14830	COG2223	nitrite transmembrane transporter activity
FIM01_RS14835	COG2207	Transcriptional regulator
FIM01_RS14840	COG2066	Belongs to the glutaminase family
FIM01_RS14845	COG0242	peptide deformylase activity
FIM01_RS14850	COG0477	Major facilitator Superfamily
FIM01_RS14860	COG0028	Belongs to the TPP enzyme family
FIM01_RS14875	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS14880	COG2267	carboxylic ester hydrolase activity
FIM01_RS14890	COG2271	Major facilitator Superfamily
FIM01_RS14895	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_RS14905	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS14925	COG1414	Transcriptional regulator
FIM01_RS14940	COG1024	Enoyl-CoA hydratase
FIM01_RS14950	COG1215	transferase activity, transferring glycosyl groups
FIM01_RS14955	COG0726	polysaccharide deacetylase
FIM01_RS14955	COG1649	PFAM Uncharacterised BCR, COG1649
FIM01_RS14965	COG4681	YaeQ
FIM01_RS14975	COG0523	cobalamin synthesis protein
FIM01_RS14985	COG1607	acyl-coa hydrolase
FIM01_RS14995	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_RS15000	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_RS15005	COG1309	transcriptional regulator
FIM01_RS15030	COG2040	homocysteine
FIM01_RS15035	COG0531	amino acid
FIM01_RS15090	COG1595	DNA-templated transcription, initiation
FIM01_RS15100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_RS15105	COG0477	Major facilitator Superfamily
FIM01_RS15125	COG0084	hydrolase, TatD family'
FIM01_RS15215	COG0582	viral genome integration into host DNA
FIM01_RS15235	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FIM01_RS15305	COG0592	DNA-directed DNA polymerase activity
FIM01_RS15475	COG3755	Protein conserved in bacteria
FIM01_RS15520	COG1484	DNA-dependent DNA replication
FIM01_RS15610	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_RS15675	COG0405	Gamma-glutamyltransferase
FIM01_RS15680	COG2814	Major facilitator Superfamily
FIM01_RS15690	COG2050	protein possibly involved in aromatic compounds catabolism
FIM01_RS15705	COG1090	epimerase
FIM01_RS15725	COG0420	3'-5' exonuclease activity
FIM01_RS15750	COG0735	belongs to the Fur family
FIM01_RS15755	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIM01_RS15780	COG0121	glutamine amidotransferase
FIM01_RS15795	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIM01_RS15805	COG0210	DNA helicase
FIM01_RS15810	COG2885	chlorophyll binding
FIM01_RS15815	COG0204	Acyl-transferase
FIM01_RS15830	COG2894	cell division
FIM01_RS15845	COG1280	lysine exporter protein (LysE YggA)
FIM01_RS15850	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FIM01_RS15850	COG1674	ftsk spoiiie
FIM01_RS15855	COG0492	ferredoxin-NADP+ reductase activity
FIM01_RS15860	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FIM01_RS15880	COG0456	acetyltransferase
FIM01_RS15925	COG1981	membrane
FIM01_RS15940	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FIM01_RS15940	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIM01_RS15960	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS15970	COG0657	acetylesterase activity
FIM01_RS15980	COG0473	3-isopropylmalate dehydrogenase activity
FIM01_RS15985	COG0583	DNA-binding transcription factor activity
FIM01_RS16005	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIM01_RS16030	COG0564	pseudouridine synthase activity
FIM01_RS16040	COG0358	DNA primase activity
FIM01_RS16055	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FIM01_RS16085	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FIM01_RS16115	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FIM01_RS16125	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FIM01_RS16125	COG0352	thiamine-phosphate diphosphorylase activity
FIM01_RS16125	COG0351	phosphomethylpyrimidine kinase
FIM01_RS16130	COG1652	LysM domain
FIM01_RS16155	COG1399	metal-binding, possibly nucleic acid-binding protein
FIM01_RS16160	COG3101	peptidyl-lysine hydroxylation
FIM01_RS16165	COG0009	L-threonylcarbamoyladenylate synthase
FIM01_RS16170	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FIM01_RS16175	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FIM01_RS16190	COG4106	trans-aconitate 2-methyltransferase activity
FIM01_RS16205	COG2226	methyltransferase
FIM01_RS16205	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FIM01_RS16205	COG0596	Alpha beta hydrolase
FIM01_RS16210	COG1877	trehalose-phosphatase activity
FIM01_RS16215	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FIM01_RS16220	COG2223	nitrite transmembrane transporter activity
FIM01_RS16240	COG1196	nuclear chromosome segregation
FIM01_RS16250	COG0730	response to heat
FIM01_RS16265	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FIM01_RS16275	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIM01_RS16335	COG0489	protein tyrosine kinase activity
FIM01_RS16345	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIM01_RS16345	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIM01_RS16375	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FIM01_RS16380	COG2081	HI0933 family
FIM01_RS16390	COG0668	transmembrane transport
FIM01_RS16410	COG0583	DNA-binding transcription factor activity
FIM01_RS16435	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FIM01_RS16440	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FIM01_RS16470	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FIM01_RS16510	COG0745	RESPONSE REGULATOR receiver
FIM01_RS16530	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FIM01_RS16540	COG0384	phenazine biosynthesis protein PhzF
FIM01_RS16570	COG1309	transcriptional regulator
FIM01_RS16590	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_RS16605	COG0583	DNA-binding transcription factor activity
FIM01_RS16635	COG0583	DNA-binding transcription factor activity
FIM01_RS16655	COG0583	DNA-binding transcription factor activity
FIM01_RS16660	COG1053	succinate dehydrogenase
FIM01_RS16670	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FIM01_RS16675	COG2814	Major facilitator Superfamily
FIM01_RS16680	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS16685	COG0583	DNA-binding transcription factor activity
FIM01_RS16690	COG1063	alcohol dehydrogenase
FIM01_RS16725	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FIM01_RS16730	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FIM01_RS16735	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FIM01_RS16750	COG3667	copper resistance
FIM01_RS16755	COG2132	Multicopper oxidase
FIM01_RS16765	COG0561	phosphatase activity
FIM01_RS16770	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FIM01_RS16780	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FIM01_RS16795	COG1214	PFAM Peptidase M22, glycoprotease
FIM01_RS16845	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FIM01_RS16855	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FIM01_RS16860	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FIM01_RS16865	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FIM01_RS16925	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIM01_RS16935	COG1846	Transcriptional regulator
FIM01_RS16940	COG1764	response to oxidative stress
FIM01_RS16980	COG0037	tRNA processing
FIM01_RS16990	COG0248	Ppx GppA phosphatase
FIM01_RS17020	COG0072	phenylalanine-tRNA ligase activity
FIM01_RS17055	COG1238	metal cluster binding
FIM01_RS17060	COG0625	glutathione transferase activity
FIM01_RS17075	COG0318	PFAM AMP-dependent synthetase and ligase
FIM01_RS17080	COG3028	Belongs to the UPF0307 family
FIM01_RS17085	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIM01_RS17105	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FIM01_RS17110	COG0617	tRNA 3'-terminal CCA addition
FIM01_RS17115	COG1555	photosystem II stabilization
FIM01_RS17120	COG3956	TIGRFAM MazG family protein
FIM01_RS17130	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIM01_RS17150	COG0784	Response regulator, receiver
FIM01_RS17150	COG5002	protein histidine kinase activity
FIM01_RS17150	COG2205	protein histidine kinase activity
FIM01_RS17155	COG1024	Enoyl-CoA hydratase
FIM01_RS17160	COG2084	Dehydrogenase
FIM01_RS17165	COG3622	Belongs to the hyi family
FIM01_RS17195	COG0697	spore germination
FIM01_RS17205	COG2814	Major facilitator Superfamily
FIM01_RS17225	COG2132	Multicopper oxidase
FIM01_RS17240	COG2205	protein histidine kinase activity
FIM01_RS17330	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIM01_RS17340	COG0583	DNA-binding transcription factor activity
FIM01_RS17350	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FIM01_RS17360	COG0084	hydrolase, TatD family'
FIM01_RS17375	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FIM01_RS17410	COG0440	acetolactate synthase activity
FIM01_RS17415	COG0028	Belongs to the TPP enzyme family
FIM01_RS17440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_RS17445	COG1136	(ABC) transporter
FIM01_RS17445	COG0577	efflux transmembrane transporter activity
FIM01_RS17450	COG1538	Outer membrane efflux protein
FIM01_RS17465	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FIM01_RS17470	COG1162	GTPase activity
FIM01_RS17480	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FIM01_RS17520	COG1426	Protein conserved in bacteria
FIM01_RS17555	COG0793	Belongs to the peptidase S41A family
FIM01_RS17570	COG2267	carboxylic ester hydrolase activity
FIM01_RS17580	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_RS17585	COG3265	gluconokinase activity
FIM01_RS17595	COG0800	Aldolase
FIM01_RS17605	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FIM01_RS17610	COG0280	phosphate acetyltransferase
FIM01_RS17610	COG0857	belongs to the CobB CobQ family
FIM01_RS17615	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FIM01_RS17615	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FIM01_RS17635	COG0740	serine-type endopeptidase activity
FIM01_RS17645	COG4774	siderophore transport
FIM01_RS17655	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FIM01_RS17665	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FIM01_RS17665	COG2813	Specifically methylates the guanine in position
FIM01_RS17765	COG0788	formyltetrahydrofolate deformylase activity
FIM01_RS17790	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIM01_RS17790	COG4651	solute:proton antiporter activity
FIM01_RS17810	COG0724	RNA recognition motif
FIM01_RS17815	COG0210	DNA helicase
FIM01_RS17840	COG1733	regulation of RNA biosynthetic process
FIM01_RS17850	COG2900	Belongs to the SlyX family
FIM01_RS17855	COG0488	(ABC) transporter
FIM01_RS17860	COG1280	lysine exporter protein (LysE YggA)
FIM01_RS17865	COG1560	Kdo2-lipid A biosynthetic process
FIM01_RS17875	COG1301	dicarboxylic acid transport
FIM01_RS17930	COG0473	3-isopropylmalate dehydrogenase activity
FIM01_RS17985	COG0583	DNA-binding transcription factor activity
FIM01_RS17995	COG0625	glutathione transferase activity
FIM01_RS18000	COG2378	regulation of single-species biofilm formation
FIM01_RS18005	COG0546	phosphoglycolate phosphatase activity
FIM01_RS18020	COG1530	ribonuclease E activity
FIM01_RS18025	COG0318	PFAM AMP-dependent synthetase and ligase
FIM01_RS18040	COG0583	DNA-binding transcription factor activity
FIM01_RS18045	COG4221	oxidoreductase activity
FIM01_RS18050	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIM01_RS18060	COG0534	Mate efflux family protein
FIM01_RS18075	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FIM01_RS18100	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIM01_RS18100	COG0493	'glutamate synthase
FIM01_RS18110	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FIM01_RS18115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_RS18130	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FIM01_RS18140	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FIM01_RS18140	COG0644	oxidoreductase
FIM01_RS18150	COG0425	Belongs to the sulfur carrier protein TusA family
FIM01_RS18155	COG4535	Mg2 and Co2 transporter CorC
FIM01_RS18165	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIM01_RS18185	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FIM01_RS18190	COG0475	glutathione-regulated potassium exporter activity
FIM01_RS18190	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIM01_RS18205	COG0484	heat shock protein binding
FIM01_RS18210	COG0789	Transcriptional regulator
FIM01_RS18215	COG0598	Magnesium transport protein CorA
FIM01_RS18230	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FIM01_RS18235	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FIM01_RS18240	COG1074	ATP-dependent DNA helicase activity
FIM01_RS18245	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FIM01_RS18265	COG2226	methyltransferase
FIM01_RS18280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_RS18285	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FIM01_RS18300	COG2111	Na H antiporter
FIM01_RS18300	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FIM01_RS18305	COG1006	Multisubunit Na H antiporter MnhC subunit
FIM01_RS18310	COG0651	ATP synthesis coupled electron transport
FIM01_RS18315	COG1863	multisubunit Na H antiporter MnhE subunit
FIM01_RS18320	COG2212	antiporter activity
FIM01_RS18325	COG1320	monovalent cation:proton antiporter activity
FIM01_RS18340	COG0195	Participates in both transcription termination and antitermination
FIM01_RS18390	COG0237	dephospho-CoA kinase activity
FIM01_RS18400	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIM01_RS18415	COG0497	DNA recombination
FIM01_RS18425	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FIM01_RS18455	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FIM01_RS18455	COG2169	Transcriptional regulator
FIM01_RS18460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FIM01_RS18520	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FIM01_RS18535	COG0326	Molecular chaperone. Has ATPase activity
FIM01_RS18555	COG2056	Na+-H+ antiporter family
FIM01_RS18655	COG0546	phosphoglycolate phosphatase activity
FIM01_RS18660	COG1716	ATPase activity
FIM01_RS18705	COG0181	hydroxymethylbilane synthase activity
FIM01_RS18715	COG3275	phosphorelay sensor kinase activity
FIM01_RS18735	COG1538	Outer membrane efflux protein
FIM01_RS18740	COG0697	spore germination
FIM01_RS18765	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FIM01_RS18770	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FIM01_RS18775	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FIM01_RS18780	COG0772	Belongs to the SEDS family
FIM01_RS18805	COG4974	Belongs to the 'phage' integrase family
FIM01_RS18810	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIM01_RS18820	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FIM01_RS18830	COG2197	response regulator
FIM01_RS18845	COG0793	Belongs to the peptidase S41A family
FIM01_RS18850	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FIM01_RS18855	COG0795	lipopolysaccharide-transporting ATPase activity
FIM01_RS18895	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIM01_RS18895	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIM01_RS18905	COG0004	ammonium transporteR
FIM01_RS18910	COG0347	Belongs to the P(II) protein family
FIM01_RS18920	COG0606	chelatase, subunit chli
FIM01_RS18930	COG0659	secondary active sulfate transmembrane transporter activity
FIM01_RS18960	COG0789	Transcriptional regulator
FIM01_RS19060	COG0697	spore germination
FIM01_RS19080	COG0789	Transcriptional regulator
FIM01_RS19180	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FIM01_RS19210	COG0789	Transcriptional regulator
FIM01_RS19225	COG0640	Transcriptional regulator
FIM01_RS19235	COG0798	PFAM Bile acid sodium symporter
FIM01_RS19240	COG0431	NADPH-dependent FMN reductase
FIM01_RS19245	COG0492	ferredoxin-NADP+ reductase activity
FIM01_RS19250	COG2072	flavoprotein involved in K transport
FIM01_RS19280	COG0606	chelatase, subunit chli
FIM01_RS19285	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_RS19295	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_RS19310	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FIM01_RS19325	COG0318	PFAM AMP-dependent synthetase and ligase
FIM01_RS19335	COG0477	Major facilitator Superfamily
FIM01_RS19340	COG2860	membrane
FIM01_RS19345	COG3012	SEC-C Motif Domain Protein
FIM01_RS19350	COG1253	flavin adenine dinucleotide binding
FIM01_RS19360	COG0477	Major facilitator Superfamily
FIM01_RS19370	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FIM01_RS19405	COG0655	NAD(P)H dehydrogenase (quinone) activity
FIM01_RS19415	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FIM01_RS19450	COG1309	transcriptional regulator
FIM01_RS19485	COG0758	DNA mediated transformation
FIM01_RS19495	COG0697	spore germination
FIM01_RS19500	COG1309	transcriptional regulator
FIM01_RS19515	COG0386	Belongs to the glutathione peroxidase family
FIM01_RS19580	COG1121	(ABC) transporter
FIM01_RS19585	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIM01_RS19590	COG1280	lysine exporter protein (LysE YggA)
FIM01_RS19595	COG2837	iron assimilation
FIM01_RS19600	COG0281	malic enzyme
FIM01_RS19645	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FIM01_RS19645	COG0519	Catalyzes the synthesis of GMP from XMP
FIM01_RS19650	COG4399	Belongs to the UPF0754 family
FIM01_RS19655	COG2259	Doxx family
FIM01_RS19660	COG0586	Pfam SNARE associated Golgi protein
FIM01_RS19675	COG1192	Involved in chromosome partitioning
FIM01_RS19685	COG0271	Belongs to the BolA IbaG family
FIM01_RS19705	COG2267	carboxylic ester hydrolase activity
FIM01_RS19725	COG3321	synthase
FIM01_RS19725	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FIM01_RS19725	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FIM01_RS19725	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FIM01_RS19730	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS19740	COG2197	response regulator
FIM01_RS19750	COG3916	Acyl-homoserine-lactone synthase
FIM01_RS19755	COG0477	Major facilitator Superfamily
FIM01_RS19760	COG1024	Enoyl-CoA hydratase
FIM01_RS19765	COG1024	Enoyl-CoA hydratase
FIM01_RS19770	COG1960	acyl-CoA dehydrogenase activity
FIM01_RS19775	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIM01_RS19795	COG1113	amino acid transport
FIM01_RS19800	COG1113	amino acid transport
FIM01_RS19805	COG0251	oxidation-reduction process
FIM01_RS19845	COG0564	pseudouridine synthase activity
FIM01_RS19895	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FIM01_RS19910	COG1802	Transcriptional regulator
FIM01_RS19915	COG1448	Aminotransferase
FIM01_RS19920	COG0277	FAD linked oxidase domain protein
FIM01_RS19930	COG2186	Transcriptional regulator
FIM01_RS19940	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIM01_RS19955	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FIM01_RS19965	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FIM01_RS19975	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FIM01_RS19980	COG0438	transferase activity, transferring glycosyl groups
FIM01_RS19990	COG0438	transferase activity, transferring glycosyl groups
FIM01_RS20010	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FIM01_RS20040	COG0728	peptidoglycan biosynthetic process
FIM01_RS20045	COG3023	N-Acetylmuramoyl-L-alanine amidase
FIM01_RS20100	COG0546	phosphoglycolate phosphatase activity
FIM01_RS20105	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_RS20125	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_RS20130	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_RS20135	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FIM01_RS20140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_RS20145	COG1116	anion transmembrane transporter activity
FIM01_RS20150	COG1309	transcriptional regulator
FIM01_RS20155	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FIM01_RS20170	COG0196	riboflavin kinase activity
FIM01_RS20175	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FIM01_RS20185	COG1047	Peptidyl-prolyl cis-trans
FIM01_RS20225	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FIM01_RS20230	COG0657	acetylesterase activity
FIM01_RS20280	COG2951	lytic endotransglycosylase activity
FIM01_RS20285	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FIM01_RS20305	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FIM01_RS20315	COG0671	phosphoesterase, PA-phosphatase related
FIM01_RS20325	COG0861	Integral membrane protein TerC family
FIM01_RS20335	COG0754	glutathionylspermidine amidase activity
FIM01_RS20345	COG0402	S-adenosylhomocysteine deaminase activity
FIM01_RS20360	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIM01_RS20365	COG1230	cation diffusion facilitator family transporter
FIM01_RS20380	COG0706	membrane insertase activity