locus-tag class description ABK1_RS00010 PF00579 tRNA synthetases class I (W and Y) ABK1_RS00015 PF03702 Anhydro-N-acetylmuramic acid kinase ABK1_RS00020 PF00561 alpha/beta hydrolase fold ABK1_RS00025 PF01521 Iron-sulphur cluster biosynthesis ABK1_RS00045 PF12848 ABC transporter ABK1_RS00045 PF00005 ABC transporter ABK1_RS00050 PF09335 SNARE associated Golgi protein ABK1_RS00060 PF00986 DNA gyrase B subunit, carboxyl terminus ABK1_RS00060 PF00204 DNA gyrase B ABK1_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS00060 PF01751 Toprim domain ABK1_RS00060 PF18053 DNA gyrase B subunit insert domain ABK1_RS00065 PF02463 RecF/RecN/SMC N terminal domain ABK1_RS00070 PF00712 DNA polymerase III beta subunit, N-terminal domain ABK1_RS00070 PF02767 DNA polymerase III beta subunit, central domain ABK1_RS00070 PF02768 DNA polymerase III beta subunit, C-terminal domain ABK1_RS00075 PF11638 DnaA N-terminal domain ABK1_RS00075 PF08299 Bacterial dnaA protein helix-turn-helix ABK1_RS00075 PF00308 Bacterial dnaA protein ABK1_RS00080 PF00468 Ribosomal protein L34 ABK1_RS00085 PF00825 Ribonuclease P ABK1_RS00090 PF01809 Putative membrane protein insertion efficiency factor ABK1_RS00095 PF14849 YidC periplasmic domain ABK1_RS00095 PF02096 60Kd inner membrane protein ABK1_RS00100 PF10396 GTP-binding protein TrmE N-terminus ABK1_RS00100 PF12631 MnmE helical domain ABK1_RS00100 PF01926 50S ribosome-binding GTPase ABK1_RS00105 PF02583 Metal-sensitive transcriptional repressor ABK1_RS00110 PF01545 Cation efflux family ABK1_RS00110 PF16916 Dimerisation domain of Zinc Transporter ABK1_RS00115 PF13098 Thioredoxin-like domain ABK1_RS00115 PF10411 Disulfide bond isomerase protein N-terminus ABK1_RS00125 PF00156 Phosphoribosyl transferase domain ABK1_RS00135 PF01979 Amidohydrolase family ABK1_RS00140 PF00355 Rieske [2Fe-2S] domain ABK1_RS00145 PF03738 Glutathionylspermidine synthase preATP-grasp ABK1_RS00155 PF03741 Integral membrane protein TerC family ABK1_RS00160 PF01569 PAP2 superfamily ABK1_RS00170 PF01225 Mur ligase family, catalytic domain ABK1_RS00170 PF02875 Mur ligase family, glutamate ligase domain ABK1_RS00170 PF08245 Mur ligase middle domain ABK1_RS00180 PF00731 AIR carboxylase ABK1_RS00185 PF02222 ATP-grasp domain ABK1_RS00185 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABK1_RS00190 PF13406 Transglycosylase SLT domain ABK1_RS00210 PF00012 Hsp70 protein ABK1_RS00215 PF01025 GrpE ABK1_RS00220 PF03466 LysR substrate binding domain ABK1_RS00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS00240 PF07859 alpha/beta hydrolase fold ABK1_RS00245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABK1_RS00285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABK1_RS00290 PF01252 Signal peptidase (SPase) II ABK1_RS00295 PF08264 Anticodon-binding domain of tRNA ABK1_RS00295 PF06827 Zinc finger found in FPG and IleRS ABK1_RS00295 PF00133 tRNA synthetases class I (I, L, M and V) ABK1_RS00300 PF01687 Riboflavin kinase ABK1_RS00300 PF06574 FAD synthetase ABK1_RS00310 PF01048 Phosphorylase superfamily ABK1_RS00315 PF08362 YcdC-like protein, C-terminal region ABK1_RS00315 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS00320 PF00005 ABC transporter ABK1_RS00325 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS00330 PF00296 Luciferase-like monooxygenase ABK1_RS00335 PF09084 NMT1/THI5 like ABK1_RS00340 PF09084 NMT1/THI5 like ABK1_RS00345 PF00696 Amino acid kinase family ABK1_RS00345 PF00583 Acetyltransferase (GNAT) family ABK1_RS00360 PF00106 short chain dehydrogenase ABK1_RS00365 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS00375 PF01323 DSBA-like thioredoxin domain ABK1_RS00380 PF08360 QacR-like protein, C-terminal region ABK1_RS00380 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS00385 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS00390 PF00175 Oxidoreductase NAD-binding domain ABK1_RS00395 PF00487 Fatty acid desaturase ABK1_RS00400 PF03725 3' exoribonuclease family, domain 2 ABK1_RS00400 PF01138 3' exoribonuclease family, domain 1 ABK1_RS00405 PF04185 Phosphoesterase family ABK1_RS00405 PF05506 Domain of unknown function (DUF756) ABK1_RS00415 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABK1_RS00415 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABK1_RS00420 PF01510 N-acetylmuramoyl-L-alanine amidase ABK1_RS00425 PF03023 Lipid II flippase MurJ ABK1_RS00430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABK1_RS00430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABK1_RS00435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABK1_RS00435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABK1_RS00440 PF02706 Chain length determinant protein ABK1_RS00440 PF13614 AAA domain ABK1_RS00440 PF13807 G-rich domain on putative tyrosine kinase ABK1_RS00445 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABK1_RS00450 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABK1_RS00450 PF02563 Polysaccharide biosynthesis/export protein ABK1_RS00450 PF10531 SLBB domain ABK1_RS00455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABK1_RS00455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABK1_RS00455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABK1_RS00460 PF02719 Polysaccharide biosynthesis protein ABK1_RS00465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABK1_RS00470 PF02348 Cytidylyltransferase ABK1_RS00485 PF03102 NeuB family ABK1_RS00485 PF08666 SAF domain ABK1_RS00490 PF01943 Polysaccharide biosynthesis protein ABK1_RS00495 PF07922 Glycosyltransferase family 52 ABK1_RS00510 PF00535 Glycosyl transferase family 2 ABK1_RS00515 PF13737 Transposase DDE domain ABK1_RS00520 PF00535 Glycosyl transferase family 2 ABK1_RS00525 PF02397 Bacterial sugar transferase ABK1_RS00530 PF00483 Nucleotidyl transferase ABK1_RS00535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABK1_RS00535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABK1_RS00535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABK1_RS00540 PF00342 Phosphoglucose isomerase ABK1_RS00545 PF16363 GDP-mannose 4,6 dehydratase ABK1_RS00550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABK1_RS00550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABK1_RS00550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABK1_RS00550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABK1_RS00555 PF02652 L-lactate permease ABK1_RS00560 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS00560 PF07729 FCD domain ABK1_RS00565 PF01070 FMN-dependent dehydrogenase ABK1_RS00570 PF01565 FAD binding domain ABK1_RS00570 PF09330 D-lactate dehydrogenase, membrane binding ABK1_RS00575 PF00155 Aminotransferase class I and II ABK1_RS00580 PF07729 FCD domain ABK1_RS00580 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS00590 PF00285 Citrate synthase, C-terminal domain ABK1_RS00595 PF00330 Aconitase family (aconitate hydratase) ABK1_RS00595 PF00694 Aconitase C-terminal domain ABK1_RS00610 PF00293 NUDIX domain ABK1_RS00625 PF02801 Beta-ketoacyl synthase, C-terminal domain ABK1_RS00625 PF00109 Beta-ketoacyl synthase, N-terminal domain ABK1_RS00640 PF00849 RNA pseudouridylate synthase ABK1_RS00655 PF00593 TonB dependent receptor ABK1_RS00655 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS00665 PF01037 Lrp/AsnC ligand binding domain ABK1_RS00670 PF01266 FAD dependent oxidoreductase ABK1_RS00675 PF00842 Alanine racemase, C-terminal domain ABK1_RS00675 PF01168 Alanine racemase, N-terminal domain ABK1_RS00680 PF01042 Endoribonuclease L-PSP ABK1_RS00685 PF00324 Amino acid permease ABK1_RS00690 PF00324 Amino acid permease ABK1_RS00700 PF00171 Aldehyde dehydrogenase family ABK1_RS00705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABK1_RS00705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABK1_RS00710 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS00710 PF00501 AMP-binding enzyme ABK1_RS00715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS00715 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS00715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS00720 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS00725 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS00730 PF00083 Sugar (and other) transporter ABK1_RS00730 PF07690 Major Facilitator Superfamily ABK1_RS00735 PF00765 Autoinducer synthase ABK1_RS00745 PF03472 Autoinducer binding domain ABK1_RS00745 PF00196 Bacterial regulatory proteins, luxR family ABK1_RS00750 PF13737 Transposase DDE domain ABK1_RS00755 PF00196 Bacterial regulatory proteins, luxR family ABK1_RS00755 PF03472 Autoinducer binding domain ABK1_RS00760 PF00501 AMP-binding enzyme ABK1_RS00765 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS00765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS00765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS00770 PF08659 KR domain ABK1_RS00770 PF00550 Phosphopantetheine attachment site ABK1_RS00770 PF02801 Beta-ketoacyl synthase, C-terminal domain ABK1_RS00770 PF14765 Polyketide synthase dehydratase ABK1_RS00770 PF16197 Ketoacyl-synthetase C-terminal extension ABK1_RS00770 PF00109 Beta-ketoacyl synthase, N-terminal domain ABK1_RS00775 PF00975 Thioesterase domain ABK1_RS00775 PF00550 Phosphopantetheine attachment site ABK1_RS00775 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS00775 PF00501 AMP-binding enzyme ABK1_RS00775 PF00668 Condensation domain ABK1_RS00790 PF12697 Alpha/beta hydrolase family ABK1_RS00795 PF01648 4'-phosphopantetheinyl transferase superfamily ABK1_RS00810 PF01722 BolA-like protein ABK1_RS00820 PF13614 AAA domain ABK1_RS00835 PF09335 SNARE associated Golgi protein ABK1_RS00840 PF07681 DoxX ABK1_RS00845 PF04286 Protein of unknown function (DUF445) ABK1_RS00850 PF00958 GMP synthase C terminal domain ABK1_RS00850 PF00117 Glutamine amidotransferase class-I ABK1_RS00850 PF02540 NAD synthase ABK1_RS00855 PF01909 Nucleotidyltransferase domain ABK1_RS00855 PF13427 Domain of unknown function (DUF4111) ABK1_RS00860 PF03551 Transcriptional regulator PadR-like family ABK1_RS00870 PF05726 Pirin C-terminal cupin domain ABK1_RS00870 PF02678 Pirin ABK1_RS00890 PF03485 Arginyl tRNA synthetase N terminal domain ABK1_RS00890 PF05746 DALR anticodon binding domain ABK1_RS00890 PF00750 tRNA synthetases class I (R) ABK1_RS00895 PF00390 Malic enzyme, N-terminal domain ABK1_RS00895 PF03949 Malic enzyme, NAD binding domain ABK1_RS00905 PF04261 Dyp-type peroxidase family ABK1_RS00910 PF01810 LysE type translocator ABK1_RS00915 PF00950 ABC 3 transport family ABK1_RS00920 PF00005 ABC transporter ABK1_RS00940 PF00119 ATP synthase A chain ABK1_RS00945 PF00137 ATP synthase subunit C ABK1_RS00950 PF00430 ATP synthase B/B' CF(0) ABK1_RS00955 PF00213 ATP synthase delta (OSCP) subunit ABK1_RS00960 PF00306 ATP synthase alpha/beta chain, C terminal domain ABK1_RS00960 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABK1_RS00960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABK1_RS00965 PF00231 ATP synthase ABK1_RS00970 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABK1_RS00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABK1_RS00975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABK1_RS00985 PF00255 Glutathione peroxidase ABK1_RS00995 PF07690 Major Facilitator Superfamily ABK1_RS01000 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS01005 PF00892 EamA-like transporter family ABK1_RS01010 PF01300 Telomere recombination ABK1_RS01015 PF02481 DNA recombination-mediator protein A ABK1_RS01015 PF17782 DprA winged helix domain ABK1_RS01025 PF01327 Polypeptide deformylase ABK1_RS01050 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS01085 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS01095 PF03358 NADPH-dependent FMN reductase ABK1_RS01115 PF04055 Radical SAM superfamily ABK1_RS01115 PF08497 Radical SAM N-terminal ABK1_RS01115 PF11842 Domain of unknown function (DUF3362) ABK1_RS01130 PF11798 IMS family HHH motif ABK1_RS01130 PF11799 impB/mucB/samB family C-terminal domain ABK1_RS01130 PF00817 impB/mucB/samB family ABK1_RS01140 PF07690 Major Facilitator Superfamily ABK1_RS01145 PF03641 Possible lysine decarboxylase ABK1_RS01150 PF03471 Transporter associated domain ABK1_RS01150 PF03741 Integral membrane protein TerC family ABK1_RS01155 PF02810 SEC-C motif ABK1_RS01160 PF03458 UPF0126 domain ABK1_RS01165 PF07690 Major Facilitator Superfamily ABK1_RS01170 PF00521 DNA gyrase/topoisomerase IV, subunit A ABK1_RS01170 PF03989 DNA gyrase C-terminal domain, beta-propeller ABK1_RS01175 PF00501 AMP-binding enzyme ABK1_RS01175 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS01190 PF00719 Inorganic pyrophosphatase ABK1_RS01195 PF03573 outer membrane porin, OprD family ABK1_RS01205 PF00701 Dihydrodipicolinate synthetase family ABK1_RS01215 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS01215 PF00155 Aminotransferase class I and II ABK1_RS01220 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABK1_RS01220 PF01078 Magnesium chelatase, subunit ChlI ABK1_RS01230 PF00665 Integrase core domain ABK1_RS01250 PF00582 Universal stress protein family ABK1_RS01255 PF00916 Sulfate permease family ABK1_RS01255 PF01740 STAS domain ABK1_RS01285 PF02899 Phage integrase, N-terminal SAM-like domain ABK1_RS01285 PF00589 Phage integrase family ABK1_RS01310 PF00665 Integrase core domain ABK1_RS01330 PF00809 Pterin binding enzyme ABK1_RS01335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABK1_RS01335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABK1_RS01335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABK1_RS01335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABK1_RS01350 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ABK1_RS01355 PF01636 Phosphotransferase enzyme family ABK1_RS01365 PF01609 Transposase DDE domain ABK1_RS01380 PF01609 Transposase DDE domain ABK1_RS01400 PF01636 Phosphotransferase enzyme family ABK1_RS01410 PF01078 Magnesium chelatase, subunit ChlI ABK1_RS01410 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABK1_RS01420 PF00543 Nitrogen regulatory protein P-II ABK1_RS01425 PF00909 Ammonium Transporter Family ABK1_RS01430 PF03477 ATP cone domain ABK1_RS01435 PF01872 RibD C-terminal domain ABK1_RS01435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABK1_RS01445 PF00677 Lumazine binding domain ABK1_RS01465 PF00883 Cytosol aminopeptidase family, catalytic domain ABK1_RS01465 PF02789 Cytosol aminopeptidase family, N-terminal domain ABK1_RS01475 PF03739 Lipopolysaccharide export system permease LptF/LptG ABK1_RS01480 PF01676 Metalloenzyme superfamily ABK1_RS01480 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABK1_RS01485 PF03572 Peptidase family S41 ABK1_RS01485 PF00595 PDZ domain ABK1_RS01490 PF00072 Response regulator receiver domain ABK1_RS01490 PF00158 Sigma-54 interaction domain ABK1_RS01490 PF02954 Bacterial regulatory protein, Fis family ABK1_RS01495 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS01500 PF00072 Response regulator receiver domain ABK1_RS01500 PF00196 Bacterial regulatory proteins, luxR family ABK1_RS01505 PF00768 D-alanyl-D-alanine carboxypeptidase ABK1_RS01510 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS01515 PF01842 ACT domain ABK1_RS01515 PF00742 Homoserine dehydrogenase ABK1_RS01515 PF03447 Homoserine dehydrogenase, NAD binding domain ABK1_RS01520 PF10411 Disulfide bond isomerase protein N-terminus ABK1_RS01520 PF13098 Thioredoxin-like domain ABK1_RS01525 PF00589 Phage integrase family ABK1_RS01525 PF02899 Phage integrase, N-terminal SAM-like domain ABK1_RS01535 PF02421 Ferrous iron transport protein B ABK1_RS01535 PF07670 Nucleoside recognition ABK1_RS01535 PF07664 Ferrous iron transport protein B C terminus ABK1_RS01545 PF08245 Mur ligase middle domain ABK1_RS01545 PF02875 Mur ligase family, glutamate ligase domain ABK1_RS01550 PF01098 Cell cycle protein ABK1_RS01555 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABK1_RS01560 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABK1_RS01565 PF00149 Calcineurin-like phosphoesterase ABK1_RS01570 PF00293 NUDIX domain ABK1_RS01575 PF13667 ThiC-associated domain ABK1_RS01575 PF01964 Radical SAM ThiC family ABK1_RS01590 PF00892 EamA-like transporter family ABK1_RS01595 PF02321 Outer membrane efflux protein ABK1_RS01600 PF01895 PhoU domain ABK1_RS01605 PF04362 Bacterial Fe(2+) trafficking ABK1_RS01610 PF14698 Argininosuccinate lyase C-terminal ABK1_RS01610 PF00206 Lyase ABK1_RS01615 PF06580 Histidine kinase ABK1_RS01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS01615 PF07694 5TMR of 5TMR-LYT ABK1_RS01620 PF00072 Response regulator receiver domain ABK1_RS01620 PF04397 LytTr DNA-binding domain ABK1_RS01625 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABK1_RS01625 PF03900 Porphobilinogen deaminase, C-terminal domain ABK1_RS01650 PF00816 H-NS histone family ABK1_RS01665 PF03958 Bacterial type II/III secretion system short domain ABK1_RS01665 PF00263 Bacterial type II and III secretion system protein ABK1_RS01670 PF00498 FHA domain ABK1_RS01670 PF12401 Protein of unknown function (DUF2662) ABK1_RS01675 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS01680 PF00425 chorismate binding enzyme ABK1_RS01680 PF04715 Anthranilate synthase component I, N terminal region ABK1_RS01705 PF00009 Elongation factor Tu GTP binding domain ABK1_RS01705 PF03143 Elongation factor Tu C-terminal domain ABK1_RS01705 PF03144 Elongation factor Tu domain 2 ABK1_RS01715 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABK1_RS01720 PF02357 Transcription termination factor nusG ABK1_RS01720 PF00467 KOW motif ABK1_RS01725 PF03946 Ribosomal protein L11, N-terminal domain ABK1_RS01725 PF00298 Ribosomal protein L11, RNA binding domain ABK1_RS01730 PF00687 Ribosomal protein L1p/L10e family ABK1_RS01735 PF00466 Ribosomal protein L10 ABK1_RS01740 PF00542 Ribosomal protein L7/L12 C-terminal domain ABK1_RS01740 PF16320 Ribosomal protein L7/L12 dimerisation domain ABK1_RS01745 PF00562 RNA polymerase Rpb2, domain 6 ABK1_RS01745 PF04565 RNA polymerase Rpb2, domain 3 ABK1_RS01745 PF04563 RNA polymerase beta subunit ABK1_RS01745 PF04561 RNA polymerase Rpb2, domain 2 ABK1_RS01745 PF10385 RNA polymerase beta subunit external 1 domain ABK1_RS01745 PF04560 RNA polymerase Rpb2, domain 7 ABK1_RS01750 PF05000 RNA polymerase Rpb1, domain 4 ABK1_RS01750 PF04983 RNA polymerase Rpb1, domain 3 ABK1_RS01750 PF04997 RNA polymerase Rpb1, domain 1 ABK1_RS01750 PF04998 RNA polymerase Rpb1, domain 5 ABK1_RS01750 PF00623 RNA polymerase Rpb1, domain 2 ABK1_RS01770 PF00561 alpha/beta hydrolase fold ABK1_RS01775 PF13726 Na+-H+ antiporter family ABK1_RS01775 PF03553 Na+/H+ antiporter family ABK1_RS01790 PF00183 Hsp90 protein ABK1_RS01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS01805 PF01323 DSBA-like thioredoxin domain ABK1_RS01815 PF00376 MerR family regulatory protein ABK1_RS01815 PF09278 MerR, DNA binding ABK1_RS01835 PF00108 Thiolase, N-terminal domain ABK1_RS01835 PF02803 Thiolase, C-terminal domain ABK1_RS01840 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS01840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABK1_RS01840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABK1_RS01860 PF08459 UvrC Helix-hairpin-helix N-terminal ABK1_RS01860 PF02151 UvrB/uvrC motif ABK1_RS01860 PF01541 GIY-YIG catalytic domain ABK1_RS01870 PF01066 CDP-alcohol phosphatidyltransferase ABK1_RS01875 PF12833 Helix-turn-helix domain ABK1_RS01875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABK1_RS01875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABK1_RS01875 PF02805 Metal binding domain of Ada ABK1_RS01900 PF13533 Biotin-lipoyl like ABK1_RS01905 PF03652 Holliday junction resolvase ABK1_RS01910 PF02622 Uncharacterized ACR, COG1678 ABK1_RS01915 PF02463 RecF/RecN/SMC N terminal domain ABK1_RS01925 PF06865 Pyrimidine/purine nucleoside phosphorylase ABK1_RS01930 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABK1_RS01930 PF00588 SpoU rRNA Methylase family ABK1_RS01940 PF01121 Dephospho-CoA kinase ABK1_RS01945 PF01478 Type IV leader peptidase family ABK1_RS01945 PF06750 Bacterial Peptidase A24 N-terminal domain ABK1_RS01950 PF00482 Type II secretion system (T2SS), protein F ABK1_RS01955 PF00437 Type II/IV secretion system protein ABK1_RS01955 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABK1_RS01960 PF00121 Triosephosphate isomerase ABK1_RS01965 PF03840 Preprotein translocase SecG subunit ABK1_RS01985 PF02576 RimP N-terminal domain ABK1_RS01985 PF17384 RimP C-terminal SH3 domain ABK1_RS01990 PF08529 NusA N-terminal domain ABK1_RS01990 PF13184 NusA-like KH domain ABK1_RS01990 PF00575 S1 RNA binding domain ABK1_RS01995 PF11987 Translation-initiation factor 2 ABK1_RS01995 PF00009 Elongation factor Tu GTP binding domain ABK1_RS01995 PF04760 Translation initiation factor IF-2, N-terminal region ABK1_RS01995 PF08364 Bacterial translation initiation factor IF-2 associated region ABK1_RS02000 PF02033 Ribosome-binding factor A ABK1_RS02005 PF03334 Na+/H+ antiporter subunit ABK1_RS02010 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABK1_RS02015 PF01899 Na+/H+ ion antiporter subunit ABK1_RS02020 PF00361 Proton-conducting membrane transporter ABK1_RS02025 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABK1_RS02030 PF00361 Proton-conducting membrane transporter ABK1_RS02030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABK1_RS02030 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABK1_RS02030 PF13244 Domain of unknown function (DUF4040) ABK1_RS02045 PF01502 Phosphoribosyl-AMP cyclohydrolase ABK1_RS02050 PF01494 FAD binding domain ABK1_RS02055 PF03109 ABC1 family ABK1_RS02065 PF01209 ubiE/COQ5 methyltransferase family ABK1_RS02075 PF03976 Polyphosphate kinase 2 (PPK2) ABK1_RS02085 PF17946 RecC C-terminal domain ABK1_RS02090 PF12705 PD-(D/E)XK nuclease superfamily ABK1_RS02090 PF00580 UvrD/REP helicase N-terminal domain ABK1_RS02090 PF13361 UvrD-like helicase C-terminal domain ABK1_RS02095 PF13538 UvrD-like helicase C-terminal domain ABK1_RS02100 PF00144 Beta-lactamase ABK1_RS02105 PF00312 Ribosomal protein S15 ABK1_RS02110 PF00013 KH domain ABK1_RS02110 PF01138 3' exoribonuclease family, domain 1 ABK1_RS02110 PF03725 3' exoribonuclease family, domain 2 ABK1_RS02110 PF00575 S1 RNA binding domain ABK1_RS02110 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABK1_RS02115 PF01544 CorA-like Mg2+ transporter protein ABK1_RS02125 PF01556 DnaJ C terminal domain ABK1_RS02125 PF00226 DnaJ domain ABK1_RS02135 PF01430 Hsp33 protein ABK1_RS02140 PF00999 Sodium/hydrogen exchanger family ABK1_RS02140 PF02254 TrkA-N domain ABK1_RS02145 PF17764 3′ DNA-binding domain (3′BD) ABK1_RS02145 PF00271 Helicase conserved C-terminal domain ABK1_RS02145 PF00270 DEAD/DEAH box helicase ABK1_RS02145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABK1_RS02145 PF18074 Primosomal protein N C-terminal domain ABK1_RS02150 PF00482 Type II secretion system (T2SS), protein F ABK1_RS02155 PF07963 Prokaryotic N-terminal methylation motif ABK1_RS02155 PF08334 Type II secretion system (T2SS), protein G ABK1_RS02165 PF13737 Transposase DDE domain ABK1_RS02175 PF01588 Putative tRNA binding domain ABK1_RS02180 PF00795 Carbon-nitrogen hydrolase ABK1_RS02185 PF03471 Transporter associated domain ABK1_RS02185 PF00571 CBS domain ABK1_RS02190 PF01206 Sulfurtransferase TusA ABK1_RS02205 PF01177 Asp/Glu/Hydantoin racemase ABK1_RS02215 PF00762 Ferrochelatase ABK1_RS02220 PF00753 Metallo-beta-lactamase superfamily ABK1_RS02225 PF03884 DNA gyrase inhibitor YacG ABK1_RS02245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABK1_RS02255 PF01197 Ribosomal protein L31 ABK1_RS02260 PF03109 ABC1 family ABK1_RS02265 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS02265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS02270 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS02270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS02270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS02275 PF01554 MatE ABK1_RS02285 PF04055 Radical SAM superfamily ABK1_RS02285 PF06969 HemN C-terminal domain ABK1_RS02290 PF00106 short chain dehydrogenase ABK1_RS02295 PF03466 LysR substrate binding domain ABK1_RS02295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS02310 PF00501 AMP-binding enzyme ABK1_RS02310 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS02315 PF00575 S1 RNA binding domain ABK1_RS02315 PF10150 Ribonuclease E/G family ABK1_RS02315 PF12111 Polyribonucleotide phosphorylase C terminal ABK1_RS02320 PF00849 RNA pseudouridylate synthase ABK1_RS02320 PF01479 S4 domain ABK1_RS02325 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS02330 PF08279 HTH domain ABK1_RS02330 PF13280 WYL domain ABK1_RS02335 PF13737 Transposase DDE domain ABK1_RS02340 PF02798 Glutathione S-transferase, N-terminal domain ABK1_RS02350 PF03466 LysR substrate binding domain ABK1_RS02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS02355 PF12706 Beta-lactamase superfamily domain ABK1_RS02360 PF00141 Peroxidase ABK1_RS02365 PF01590 GAF domain ABK1_RS02365 PF00391 PEP-utilising enzyme, mobile domain ABK1_RS02365 PF02896 PEP-utilising enzyme, TIM barrel domain ABK1_RS02365 PF05524 PEP-utilising enzyme, N-terminal ABK1_RS02370 PF00293 NUDIX domain ABK1_RS02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS02390 PF03466 LysR substrate binding domain ABK1_RS02400 PF00330 Aconitase family (aconitate hydratase) ABK1_RS02405 PF00694 Aconitase C-terminal domain ABK1_RS02415 PF00180 Isocitrate/isopropylmalate dehydrogenase ABK1_RS02430 PF01176 Translation initiation factor 1A / IF-1 ABK1_RS02440 PF01416 tRNA pseudouridine synthase ABK1_RS02460 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABK1_RS02460 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABK1_RS02470 PF00375 Sodium:dicarboxylate symporter family ABK1_RS02480 PF03279 Bacterial lipid A biosynthesis acyltransferase ABK1_RS02485 PF01810 LysE type translocator ABK1_RS02490 PF16326 ABC transporter C-terminal domain ABK1_RS02490 PF00005 ABC transporter ABK1_RS02490 PF12848 ABC transporter ABK1_RS02495 PF04102 SlyX ABK1_RS02500 PF00107 Zinc-binding dehydrogenase ABK1_RS02500 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS02505 PF01638 HxlR-like helix-turn-helix ABK1_RS02515 PF01751 Toprim domain ABK1_RS02515 PF01396 Topoisomerase DNA binding C4 zinc finger ABK1_RS02515 PF08272 Topoisomerase I zinc-ribbon-like ABK1_RS02515 PF01131 DNA topoisomerase ABK1_RS02530 PF13361 UvrD-like helicase C-terminal domain ABK1_RS02530 PF00580 UvrD/REP helicase N-terminal domain ABK1_RS02535 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABK1_RS02555 PF02254 TrkA-N domain ABK1_RS02555 PF00999 Sodium/hydrogen exchanger family ABK1_RS02560 PF00471 Ribosomal protein L33 ABK1_RS02565 PF00830 Ribosomal L28 family ABK1_RS02570 PF00171 Aldehyde dehydrogenase family ABK1_RS02580 PF01842 ACT domain ABK1_RS02580 PF00551 Formyl transferase ABK1_RS02590 PF01618 MotA/TolQ/ExbB proton channel family ABK1_RS02600 PF01625 Peptide methionine sulfoxide reductase ABK1_RS02610 PF00186 Dihydrofolate reductase ABK1_RS02615 PF00303 Thymidylate synthase ABK1_RS02630 PF01790 Prolipoprotein diacylglyceryl transferase ABK1_RS02650 PF00902 Sec-independent protein translocase protein (TatC) ABK1_RS02655 PF02416 mttA/Hcf106 family ABK1_RS02660 PF02416 mttA/Hcf106 family ABK1_RS02670 PF01725 Ham1 family ABK1_RS02680 PF00561 alpha/beta hydrolase fold ABK1_RS02680 PF07021 Methionine biosynthesis protein MetW ABK1_RS02685 PF00561 alpha/beta hydrolase fold ABK1_RS02690 PF08502 LeuA allosteric (dimerisation) domain ABK1_RS02690 PF00682 HMGL-like ABK1_RS02695 PF18331 PKHD-type hydroxylase C-terminal domain ABK1_RS02695 PF13640 2OG-Fe(II) oxygenase superfamily ABK1_RS02700 PF00593 TonB dependent receptor ABK1_RS02700 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS02705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABK1_RS02705 PF05698 Bacterial trigger factor protein (TF) C-terminus ABK1_RS02705 PF05697 Bacterial trigger factor protein (TF) ABK1_RS02710 PF00574 Clp protease ABK1_RS02715 PF10431 C-terminal, D2-small domain, of ClpB protein ABK1_RS02715 PF07724 AAA domain (Cdc48 subfamily) ABK1_RS02715 PF06689 ClpX C4-type zinc finger ABK1_RS02730 PF05681 Fumarate hydratase (Fumerase) ABK1_RS02730 PF05683 Fumarase C-terminus ABK1_RS02735 PF07085 DRTGG domain ABK1_RS02735 PF01515 Phosphate acetyl/butaryl transferase ABK1_RS02740 PF00871 Acetokinase family ABK1_RS02745 PF00920 Dehydratase family ABK1_RS02750 PF01081 KDPG and KHG aldolase ABK1_RS02755 PF02447 GntP family permease ABK1_RS02760 PF01202 Shikimate kinase ABK1_RS02765 PF00171 Aldehyde dehydrogenase family ABK1_RS02770 PF00171 Aldehyde dehydrogenase family ABK1_RS02775 PF00561 alpha/beta hydrolase fold ABK1_RS02785 PF00933 Glycosyl hydrolase family 3 N terminal domain ABK1_RS02790 PF00595 PDZ domain ABK1_RS02790 PF11818 C-terminal domain of tail specific protease (DUF3340) ABK1_RS02790 PF17804 Tail specific protease N-terminal domain ABK1_RS02790 PF03572 Peptidase family S41 ABK1_RS02795 PF13439 Glycosyltransferase Family 4 ABK1_RS02795 PF00534 Glycosyl transferases group 1 ABK1_RS02800 PF01569 PAP2 superfamily ABK1_RS02805 PF04384 Iron-sulphur cluster assembly ABK1_RS02810 PF00334 Nucleoside diphosphate kinase ABK1_RS02815 PF04055 Radical SAM superfamily ABK1_RS02825 PF13464 Domain of unknown function (DUF4115) ABK1_RS02830 PF04551 GcpE protein ABK1_RS02835 PF03129 Anticodon binding domain ABK1_RS02835 PF13393 Histidyl-tRNA synthetase ABK1_RS02845 PF13360 PQQ-like domain ABK1_RS02850 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABK1_RS02850 PF01926 50S ribosome-binding GTPase ABK1_RS02875 PF00550 Phosphopantetheine attachment site ABK1_RS02880 PF00550 Phosphopantetheine attachment site ABK1_RS02890 PF00501 AMP-binding enzyme ABK1_RS02890 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS02905 PF00221 Aromatic amino acid lyase ABK1_RS02925 PF04820 Tryptophan halogenase ABK1_RS02935 PF00109 Beta-ketoacyl synthase, N-terminal domain ABK1_RS02935 PF02801 Beta-ketoacyl synthase, C-terminal domain ABK1_RS02950 PF00109 Beta-ketoacyl synthase, N-terminal domain ABK1_RS02950 PF02801 Beta-ketoacyl synthase, C-terminal domain ABK1_RS02965 PF02556 Preprotein translocase subunit SecB ABK1_RS02970 PF00462 Glutaredoxin ABK1_RS02980 PF03193 RsgA GTPase ABK1_RS02985 PF00929 Exonuclease ABK1_RS03000 PF02321 Outer membrane efflux protein ABK1_RS03005 PF02687 FtsX-like permease family ABK1_RS03005 PF00005 ABC transporter ABK1_RS03005 PF12704 MacB-like periplasmic core domain ABK1_RS03010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABK1_RS03025 PF08264 Anticodon-binding domain of tRNA ABK1_RS03025 PF00133 tRNA synthetases class I (I, L, M and V) ABK1_RS03025 PF13603 Leucyl-tRNA synthetase, Domain 2 ABK1_RS03025 PF09334 tRNA synthetases class I (M) ABK1_RS03035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABK1_RS03035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABK1_RS03035 PF00205 Thiamine pyrophosphate enzyme, central domain ABK1_RS03040 PF10369 Small subunit of acetolactate synthase ABK1_RS03045 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABK1_RS03045 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABK1_RS03050 PF00563 EAL domain ABK1_RS03050 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS03050 PF03707 Bacterial signalling protein N terminal repeat ABK1_RS03070 PF00009 Elongation factor Tu GTP binding domain ABK1_RS03070 PF03144 Elongation factor Tu domain 2 ABK1_RS03070 PF16658 Class II release factor RF3, C-terminal domain ABK1_RS03085 PF01026 TatD related DNase ABK1_RS03090 PF00330 Aconitase family (aconitate hydratase) ABK1_RS03090 PF00694 Aconitase C-terminal domain ABK1_RS03100 PF00899 ThiF family ABK1_RS03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS03105 PF03466 LysR substrate binding domain ABK1_RS03115 PF01207 Dihydrouridine synthase (Dus) ABK1_RS03120 PF07690 Major Facilitator Superfamily ABK1_RS03130 PF00892 EamA-like transporter family ABK1_RS03135 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABK1_RS03135 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABK1_RS03140 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABK1_RS03145 PF02233 NAD(P) transhydrogenase beta subunit ABK1_RS03150 PF00106 short chain dehydrogenase ABK1_RS03160 PF01261 Xylose isomerase-like TIM barrel ABK1_RS03165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABK1_RS03165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABK1_RS03170 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS03175 PF01627 Hpt domain ABK1_RS03175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABK1_RS03175 PF00072 Response regulator receiver domain ABK1_RS03175 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS03175 PF00672 HAMP domain ABK1_RS03180 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS03190 PF05958 tRNA (Uracil-5-)-methyltransferase ABK1_RS03195 PF13291 ACT domain ABK1_RS03195 PF04607 Region found in RelA / SpoT proteins ABK1_RS03195 PF02824 TGS domain ABK1_RS03205 PF03819 MazG nucleotide pyrophosphohydrolase domain ABK1_RS03215 PF12626 Polymerase A arginine-rich C-terminus ABK1_RS03215 PF01743 Poly A polymerase head domain ABK1_RS03215 PF12627 Probable RNA and SrmB- binding site of polymerase A ABK1_RS03220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABK1_RS03225 PF02548 Ketopantoate hydroxymethyltransferase ABK1_RS03230 PF02569 Pantoate-beta-alanine ligase ABK1_RS03235 PF03668 P-loop ATPase protein family ABK1_RS03240 PF00381 PTS HPr component phosphorylation site ABK1_RS03245 PF04751 Protein of unknown function (DUF615) ABK1_RS03250 PF00501 AMP-binding enzyme ABK1_RS03250 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS03255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABK1_RS03255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABK1_RS03255 PF02824 TGS domain ABK1_RS03255 PF03129 Anticodon binding domain ABK1_RS03260 PF05198 Translation initiation factor IF-3, N-terminal domain ABK1_RS03260 PF00707 Translation initiation factor IF-3, C-terminal domain ABK1_RS03265 PF00043 Glutathione S-transferase, C-terminal domain ABK1_RS03265 PF02798 Glutathione S-transferase, N-terminal domain ABK1_RS03270 PF09335 SNARE associated Golgi protein ABK1_RS03275 PF07690 Major Facilitator Superfamily ABK1_RS03280 PF01632 Ribosomal protein L35 ABK1_RS03285 PF00453 Ribosomal protein L20 ABK1_RS03305 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABK1_RS03305 PF01409 tRNA synthetases class II core domain (F) ABK1_RS03310 PF03484 tRNA synthetase B5 domain ABK1_RS03310 PF03483 B3/4 domain ABK1_RS03310 PF01588 Putative tRNA binding domain ABK1_RS03310 PF03147 Ferredoxin-fold anticodon binding domain ABK1_RS03310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABK1_RS03315 PF00216 Bacterial DNA-binding protein ABK1_RS03330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABK1_RS03330 PF07498 Rho termination factor, N-terminal domain ABK1_RS03330 PF07497 Rho termination factor, RNA-binding domain ABK1_RS03335 PF00085 Thioredoxin ABK1_RS03340 PF02541 Ppx/GppA phosphatase family ABK1_RS03345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABK1_RS03350 PF09179 TilS substrate binding domain ABK1_RS03350 PF01171 PP-loop family ABK1_RS03350 PF11734 TilS substrate C-terminal domain ABK1_RS03355 PF03807 NADP oxidoreductase coenzyme F420-dependent ABK1_RS03355 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABK1_RS03360 PF02325 YGGT family ABK1_RS03365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABK1_RS03365 PF01367 5'-3' exonuclease, C-terminal SAM fold ABK1_RS03365 PF01612 3'-5' exonuclease ABK1_RS03365 PF00476 DNA polymerase family A ABK1_RS03385 PF00437 Type II/IV secretion system protein ABK1_RS03390 PF02566 OsmC-like protein ABK1_RS03395 PF01047 MarR family ABK1_RS03405 PF00795 Carbon-nitrogen hydrolase ABK1_RS03450 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABK1_RS03450 PF04963 Sigma-54 factor, core binding domain ABK1_RS03450 PF04552 Sigma-54, DNA binding domain ABK1_RS03455 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABK1_RS03460 PF01722 BolA-like protein ABK1_RS03465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABK1_RS03470 PF01634 ATP phosphoribosyltransferase ABK1_RS03475 PF00815 Histidinol dehydrogenase ABK1_RS03480 PF00155 Aminotransferase class I and II ABK1_RS03485 PF00425 chorismate binding enzyme ABK1_RS03485 PF04715 Anthranilate synthase component I, N terminal region ABK1_RS03525 PF00293 NUDIX domain ABK1_RS03530 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS03535 PF00814 Glycoprotease family ABK1_RS03540 PF04445 Putative SAM-dependent methyltransferase ABK1_RS03550 PF00756 Putative esterase ABK1_RS03560 PF00834 Ribulose-phosphate 3 epimerase family ABK1_RS03575 PF00394 Multicopper oxidase ABK1_RS03575 PF07732 Multicopper oxidase ABK1_RS03575 PF07731 Multicopper oxidase ABK1_RS03580 PF05275 Copper resistance protein B precursor (CopB) ABK1_RS03590 PF00893 Small Multidrug Resistance protein ABK1_RS03595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABK1_RS03595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABK1_RS03600 PF01960 ArgJ family ABK1_RS03605 PF02445 Quinolinate synthetase A protein ABK1_RS03630 PF00962 Adenosine/AMP deaminase ABK1_RS03635 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS03635 PF00107 Zinc-binding dehydrogenase ABK1_RS03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS03640 PF03466 LysR substrate binding domain ABK1_RS03645 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS03645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS03645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS03650 PF07690 Major Facilitator Superfamily ABK1_RS03655 PF02515 CoA-transferase family III ABK1_RS03665 PF00890 FAD binding domain ABK1_RS03665 PF14537 Cytochrome c3 ABK1_RS03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS03670 PF03466 LysR substrate binding domain ABK1_RS03680 PF07690 Major Facilitator Superfamily ABK1_RS03685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS03685 PF03466 LysR substrate binding domain ABK1_RS03695 PF07687 Peptidase dimerisation domain ABK1_RS03695 PF01546 Peptidase family M20/M25/M40 ABK1_RS03700 PF12833 Helix-turn-helix domain ABK1_RS03700 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABK1_RS03710 PF01810 LysE type translocator ABK1_RS03715 PF03466 LysR substrate binding domain ABK1_RS03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS03725 PF01717 Cobalamin-independent synthase, Catalytic domain ABK1_RS03725 PF08267 Cobalamin-independent synthase, N-terminal domain ABK1_RS03730 PF01613 Flavin reductase like domain ABK1_RS03755 PF02567 Phenazine biosynthesis-like protein ABK1_RS03770 PF13737 Transposase DDE domain ABK1_RS03780 PF01011 PQQ enzyme repeat ABK1_RS03780 PF13360 PQQ-like domain ABK1_RS03860 PF00268 Ribonucleotide reductase, small chain ABK1_RS03870 PF00317 Ribonucleotide reductase, all-alpha domain ABK1_RS03870 PF02867 Ribonucleotide reductase, barrel domain ABK1_RS03870 PF03477 ATP cone domain ABK1_RS03880 PF00072 Response regulator receiver domain ABK1_RS03880 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS03885 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS03885 PF00672 HAMP domain ABK1_RS03895 PF17151 Periplasmic sensor domain ABK1_RS03895 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS03900 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABK1_RS03905 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABK1_RS03910 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABK1_RS03910 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABK1_RS03920 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABK1_RS03920 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABK1_RS03920 PF10531 SLBB domain ABK1_RS03925 PF00384 Molybdopterin oxidoreductase ABK1_RS03925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABK1_RS03925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABK1_RS03930 PF00146 NADH dehydrogenase ABK1_RS03935 PF12838 4Fe-4S dicluster domain ABK1_RS03940 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABK1_RS03945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABK1_RS03950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABK1_RS03950 PF00361 Proton-conducting membrane transporter ABK1_RS03955 PF00361 Proton-conducting membrane transporter ABK1_RS03960 PF00361 Proton-conducting membrane transporter ABK1_RS03970 PF00313 'Cold-shock' DNA-binding domain ABK1_RS03975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS03975 PF03466 LysR substrate binding domain ABK1_RS03980 PF00970 Oxidoreductase FAD-binding domain ABK1_RS03980 PF00175 Oxidoreductase NAD-binding domain ABK1_RS03995 PF05552 Conserved TM helix ABK1_RS04010 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS04015 PF13533 Biotin-lipoyl like ABK1_RS04040 PF01588 Putative tRNA binding domain ABK1_RS04040 PF09334 tRNA synthetases class I (M) ABK1_RS04050 PF10609 NUBPL iron-transfer P-loop NTPase ABK1_RS04055 PF01048 Phosphorylase superfamily ABK1_RS04070 PF00692 dUTPase ABK1_RS04100 PF01207 Dihydrouridine synthase (Dus) ABK1_RS04110 PF02881 SRP54-type protein, helical bundle domain ABK1_RS04110 PF00448 SRP54-type protein, GTPase domain ABK1_RS04110 PF02978 Signal peptide binding domain ABK1_RS04115 PF03309 Type III pantothenate kinase ABK1_RS04125 PF01925 Sulfite exporter TauE/SafE ABK1_RS04135 PF06470 SMC proteins Flexible Hinge Domain ABK1_RS04135 PF02463 RecF/RecN/SMC N terminal domain ABK1_RS04145 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABK1_RS04145 PF00533 BRCA1 C Terminus (BRCT) domain ABK1_RS04145 PF12826 Helix-hairpin-helix motif ABK1_RS04145 PF03120 NAD-dependent DNA ligase OB-fold domain ABK1_RS04145 PF01653 NAD-dependent DNA ligase adenylation domain ABK1_RS04150 PF00210 Ferritin-like domain ABK1_RS04155 PF07690 Major Facilitator Superfamily ABK1_RS04160 PF00982 Glycosyltransferase family 20 ABK1_RS04165 PF02358 Trehalose-phosphatase ABK1_RS04170 PF08241 Methyltransferase domain ABK1_RS04170 PF12697 Alpha/beta hydrolase family ABK1_RS04175 PF04055 Radical SAM superfamily ABK1_RS04175 PF00202 Aminotransferase class-III ABK1_RS04175 PF06968 Biotin and Thiamin Synthesis associated domain ABK1_RS04180 PF00155 Aminotransferase class I and II ABK1_RS04195 PF00849 RNA pseudouridylate synthase ABK1_RS04195 PF01479 S4 domain ABK1_RS04200 PF04079 Segregation and condensation complex subunit ScpB ABK1_RS04205 PF02616 Segregation and condensation protein ScpA ABK1_RS04210 PF01300 Telomere recombination ABK1_RS04215 PF04315 Elongation factor P hydroxylase ABK1_RS04220 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABK1_RS04225 PF01783 Ribosomal L32p protein family ABK1_RS04230 PF00698 Acyl transferase domain ABK1_RS04240 PF00550 Phosphopantetheine attachment site ABK1_RS04245 PF04972 BON domain ABK1_RS04245 PF01476 LysM domain ABK1_RS04250 PF08543 Phosphomethylpyrimidine kinase ABK1_RS04250 PF02581 Thiamine monophosphate synthase ABK1_RS04250 PF03070 TENA/THI-4/PQQC family ABK1_RS04260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABK1_RS04275 PF02261 Aspartate decarboxylase ABK1_RS04280 PF01195 Peptidyl-tRNA hydrolase ABK1_RS04285 PF01386 Ribosomal L25p family ABK1_RS04290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABK1_RS04290 PF14572 Phosphoribosyl synthetase-associated domain ABK1_RS04315 PF00288 GHMP kinases N terminal domain ABK1_RS04315 PF08544 GHMP kinases C terminal ABK1_RS04320 PF03550 Outer membrane lipoprotein LolB ABK1_RS04330 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABK1_RS04330 PF01488 Shikimate / quinate 5-dehydrogenase ABK1_RS04330 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABK1_RS04335 PF08278 DNA primase DnaG DnaB-binding ABK1_RS04335 PF08275 DNA primase catalytic core, N-terminal domain ABK1_RS04335 PF01807 CHC2 zinc finger ABK1_RS04335 PF10410 DnaB-helicase binding domain of primase ABK1_RS04340 PF13525 Outer membrane lipoprotein ABK1_RS04345 PF01479 S4 domain ABK1_RS04345 PF00849 RNA pseudouridylate synthase ABK1_RS04350 PF02578 Multi-copper polyphenol oxidoreductase laccase ABK1_RS04355 PF03358 NADPH-dependent FMN reductase ABK1_RS04360 PF01668 SmpB protein ABK1_RS04365 PF01467 Cytidylyltransferase-like ABK1_RS04370 PF00037 4Fe-4S binding domain ABK1_RS04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS04385 PF03466 LysR substrate binding domain ABK1_RS04390 PF00180 Isocitrate/isopropylmalate dehydrogenase ABK1_RS04395 PF02028 BCCT, betaine/carnitine/choline family transporter ABK1_RS04400 PF07859 alpha/beta hydrolase fold ABK1_RS04405 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABK1_RS04405 PF00355 Rieske [2Fe-2S] domain ABK1_RS04410 PF00171 Aldehyde dehydrogenase family ABK1_RS04415 PF00175 Oxidoreductase NAD-binding domain ABK1_RS04415 PF00970 Oxidoreductase FAD-binding domain ABK1_RS04415 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS04430 PF00795 Carbon-nitrogen hydrolase ABK1_RS04430 PF02540 NAD synthase ABK1_RS04440 PF05726 Pirin C-terminal cupin domain ABK1_RS04440 PF02678 Pirin ABK1_RS04445 PF03653 Uncharacterised protein family (UPF0093) ABK1_RS04450 PF02801 Beta-ketoacyl synthase, C-terminal domain ABK1_RS04450 PF00109 Beta-ketoacyl synthase, N-terminal domain ABK1_RS04460 PF00164 Ribosomal protein S12/S23 ABK1_RS04465 PF00177 Ribosomal protein S7p/S5e ABK1_RS04470 PF14492 Elongation Factor G, domain II ABK1_RS04470 PF00679 Elongation factor G C-terminus ABK1_RS04470 PF00009 Elongation factor Tu GTP binding domain ABK1_RS04470 PF03764 Elongation factor G, domain IV ABK1_RS04470 PF03144 Elongation factor Tu domain 2 ABK1_RS04475 PF00009 Elongation factor Tu GTP binding domain ABK1_RS04475 PF03144 Elongation factor Tu domain 2 ABK1_RS04475 PF03143 Elongation factor Tu C-terminal domain ABK1_RS04490 PF00583 Acetyltransferase (GNAT) family ABK1_RS04495 PF04377 Arginine-tRNA-protein transferase, C terminus ABK1_RS04495 PF04376 Arginine-tRNA-protein transferase, N terminus ABK1_RS04500 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABK1_RS04505 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS04510 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABK1_RS04510 PF17854 FtsK alpha domain ABK1_RS04510 PF09397 Ftsk gamma domain ABK1_RS04510 PF01580 FtsK/SpoIIIE family ABK1_RS04515 PF01810 LysE type translocator ABK1_RS04530 PF03776 Septum formation topological specificity factor MinE ABK1_RS04535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABK1_RS04540 PF03775 Septum formation inhibitor MinC, C-terminal domain ABK1_RS04550 PF01553 Acyltransferase ABK1_RS04555 PF13488 Glycine zipper ABK1_RS04555 PF00691 OmpA family ABK1_RS04560 PF13361 UvrD-like helicase C-terminal domain ABK1_RS04560 PF00580 UvrD/REP helicase N-terminal domain ABK1_RS04565 PF00692 dUTPase ABK1_RS04570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABK1_RS04570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABK1_RS04570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABK1_RS04570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABK1_RS04575 PF00696 Amino acid kinase family ABK1_RS04585 PF13230 Glutamine amidotransferases class-II ABK1_RS04590 PF01814 Hemerythrin HHE cation binding domain ABK1_RS04600 PF03658 RnfH family Ubiquitin ABK1_RS04605 PF04355 SmpA / OmlA family ABK1_RS04610 PF01475 Ferric uptake regulator family ABK1_RS04615 PF00437 Type II/IV secretion system protein ABK1_RS04620 PF00437 Type II/IV secretion system protein ABK1_RS04625 PF01168 Alanine racemase, N-terminal domain ABK1_RS04635 PF00149 Calcineurin-like phosphoesterase ABK1_RS04635 PF12320 Type 5 capsule protein repressor C-terminal domain ABK1_RS04655 PF01370 NAD dependent epimerase/dehydratase family ABK1_RS04655 PF08338 Domain of unknown function (DUF1731) ABK1_RS04660 PF01266 FAD dependent oxidoreductase ABK1_RS04665 PF00490 Delta-aminolevulinic acid dehydratase ABK1_RS04670 PF03061 Thioesterase superfamily ABK1_RS04675 PF13533 Biotin-lipoyl like ABK1_RS04680 PF07690 Major Facilitator Superfamily ABK1_RS04725 PF00083 Sugar (and other) transporter ABK1_RS04730 PF00701 Dihydrodipicolinate synthetase family ABK1_RS04755 PF13520 Amino acid permease ABK1_RS04760 PF02574 Homocysteine S-methyltransferase ABK1_RS04770 PF06039 Malate:quinone oxidoreductase (Mqo) ABK1_RS04775 PF00732 GMC oxidoreductase ABK1_RS04775 PF05199 GMC oxidoreductase ABK1_RS04780 PF00171 Aldehyde dehydrogenase family ABK1_RS04785 PF13977 BetI-type transcriptional repressor, C-terminal ABK1_RS04785 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS04790 PF02028 BCCT, betaine/carnitine/choline family transporter ABK1_RS04795 PF02028 BCCT, betaine/carnitine/choline family transporter ABK1_RS04805 PF03061 Thioesterase superfamily ABK1_RS04815 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABK1_RS04815 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABK1_RS04820 PF00375 Sodium:dicarboxylate symporter family ABK1_RS04825 PF07152 YaeQ protein ABK1_RS04830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABK1_RS04835 PF14883 Hypothetical glycosyl hydrolase family 13 ABK1_RS04835 PF01522 Polysaccharide deacetylase ABK1_RS04840 PF00535 Glycosyl transferase family 2 ABK1_RS04850 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS04865 PF09339 IclR helix-turn-helix domain ABK1_RS04865 PF01614 Bacterial transcriptional regulator ABK1_RS04870 PF00355 Rieske [2Fe-2S] domain ABK1_RS04880 PF00355 Rieske [2Fe-2S] domain ABK1_RS04890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABK1_RS04895 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS04895 PF14759 Reductase C-terminal ABK1_RS04900 PF07690 Major Facilitator Superfamily ABK1_RS04910 PF12697 Alpha/beta hydrolase family ABK1_RS04920 PF03447 Homoserine dehydrogenase, NAD binding domain ABK1_RS04920 PF01958 Domain of unknown function DUF108 ABK1_RS04925 PF00171 Aldehyde dehydrogenase family ABK1_RS04930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABK1_RS04930 PF00205 Thiamine pyrophosphate enzyme, central domain ABK1_RS04930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABK1_RS04940 PF07690 Major Facilitator Superfamily ABK1_RS04945 PF01327 Polypeptide deformylase ABK1_RS04950 PF04960 Glutaminase ABK1_RS04955 PF02311 AraC-like ligand binding domain ABK1_RS04955 PF12833 Helix-turn-helix domain ABK1_RS04960 PF07690 Major Facilitator Superfamily ABK1_RS04965 PF01263 Aldose 1-epimerase ABK1_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS04975 PF03466 LysR substrate binding domain ABK1_RS04985 PF07690 Major Facilitator Superfamily ABK1_RS04990 PF00456 Transketolase, thiamine diphosphate binding domain ABK1_RS04995 PF02779 Transketolase, pyrimidine binding domain ABK1_RS04995 PF02780 Transketolase, C-terminal domain ABK1_RS05000 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABK1_RS05000 PF00809 Pterin binding enzyme ABK1_RS05000 PF02607 B12 binding domain ABK1_RS05000 PF02310 B12 binding domain ABK1_RS05000 PF02574 Homocysteine S-methyltransferase ABK1_RS05005 PF01384 Phosphate transporter family ABK1_RS05010 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS05025 PF03781 Sulfatase-modifying factor enzyme 1 ABK1_RS05030 PF00884 Sulfatase ABK1_RS05040 PF01521 Iron-sulphur cluster biosynthesis ABK1_RS05040 PF01106 NifU-like domain ABK1_RS05045 PF00593 TonB dependent receptor ABK1_RS05045 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS05055 PF00561 alpha/beta hydrolase fold ABK1_RS05060 PF00484 Carbonic anhydrase ABK1_RS05065 PF13472 GDSL-like Lipase/Acylhydrolase family ABK1_RS05070 PF00005 ABC transporter ABK1_RS05080 PF01694 Rhomboid family ABK1_RS05085 PF00912 Transglycosylase ABK1_RS05090 PF13089 Polyphosphate kinase N-terminal domain ABK1_RS05090 PF13090 Polyphosphate kinase C-terminal domain 2 ABK1_RS05090 PF17941 Polyphosphate kinase C-terminal domain 1 ABK1_RS05090 PF02503 Polyphosphate kinase middle domain ABK1_RS05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS05100 PF03466 LysR substrate binding domain ABK1_RS05105 PF00561 alpha/beta hydrolase fold ABK1_RS05110 PF18113 Rubredoxin binding C-terminal domain ABK1_RS05110 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS05115 PF00301 Rubredoxin ABK1_RS05130 PF00152 tRNA synthetases class II (D, K and N) ABK1_RS05130 PF01336 OB-fold nucleic acid binding domain ABK1_RS05135 PF14052 Capsule assembly protein Wzi ABK1_RS05140 PF01507 Phosphoadenosine phosphosulfate reductase family ABK1_RS05145 PF00009 Elongation factor Tu GTP binding domain ABK1_RS05160 PF03600 Citrate transporter ABK1_RS05170 PF00571 CBS domain ABK1_RS05170 PF03471 Transporter associated domain ABK1_RS05170 PF01595 Cyclin M transmembrane N-terminal domain ABK1_RS05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS05175 PF03466 LysR substrate binding domain ABK1_RS05180 PF00463 Isocitrate lyase family ABK1_RS05195 PF01774 UreD urease accessory protein ABK1_RS05200 PF00547 Urease, gamma subunit ABK1_RS05205 PF00699 Urease beta subunit ABK1_RS05210 PF01979 Amidohydrolase family ABK1_RS05210 PF00449 Urease alpha-subunit, N-terminal domain ABK1_RS05215 PF02814 UreE urease accessory protein, N-terminal domain ABK1_RS05215 PF05194 UreE urease accessory protein, C-terminal domain ABK1_RS05220 PF01730 UreF ABK1_RS05225 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABK1_RS05240 PF03717 Penicillin-binding Protein dimerisation domain ABK1_RS05240 PF00905 Penicillin binding protein transpeptidase domain ABK1_RS05255 PF05191 Adenylate kinase, active site lid ABK1_RS05260 PF00633 Helix-hairpin-helix motif ABK1_RS05260 PF00730 HhH-GPD superfamily base excision DNA repair protein ABK1_RS05260 PF10576 Iron-sulfur binding domain of endonuclease III ABK1_RS05265 PF04060 Putative Fe-S cluster ABK1_RS05270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABK1_RS05270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABK1_RS05280 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABK1_RS05285 PF02590 Predicted SPOUT methyltransferase ABK1_RS05290 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABK1_RS05290 PF05362 Lon protease (S16) C-terminal proteolytic domain ABK1_RS05290 PF00004 ATPase family associated with various cellular activities (AAA) ABK1_RS05295 PF05662 Coiled stalk of trimeric autotransporter adhesin ABK1_RS05295 PF05658 Head domain of trimeric autotransporter adhesin ABK1_RS05295 PF03895 YadA-like membrane anchor domain ABK1_RS05295 PF13018 Extended Signal Peptide of Type V secretion system ABK1_RS05300 PF00691 OmpA family ABK1_RS05300 PF04355 SmpA / OmlA family ABK1_RS05305 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABK1_RS05630 PF01476 LysM domain ABK1_RS05630 PF01551 Peptidase family M23 ABK1_RS05630 PF08525 Opacity-associated protein A N-terminal motif ABK1_RS05675 PF00884 Sulfatase ABK1_RS05675 PF08019 Phosphoethanolamine transferase EptA/EptB ABK1_RS05690 PF00884 Sulfatase ABK1_RS05690 PF08019 Phosphoethanolamine transferase EptA/EptB ABK1_RS05720 PF05195 Aminopeptidase P, N-terminal domain ABK1_RS05720 PF00557 Metallopeptidase family M24 ABK1_RS05725 PF01494 FAD binding domain ABK1_RS05730 PF01494 FAD binding domain ABK1_RS05740 PF13411 MerR HTH family regulatory protein ABK1_RS05750 PF01810 LysE type translocator ABK1_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS05755 PF03466 LysR substrate binding domain ABK1_RS05765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABK1_RS05770 PF02021 Uncharacterised protein family UPF0102 ABK1_RS05775 PF04972 BON domain ABK1_RS05785 PF00293 NUDIX domain ABK1_RS05785 PF09297 NADH pyrophosphatase zinc ribbon domain ABK1_RS05795 PF00929 Exonuclease ABK1_RS05800 PF01476 LysM domain ABK1_RS05800 PF01464 Transglycosylase SLT domain ABK1_RS05800 PF01476 LysM domain ABK1_RS05800 PF01464 Transglycosylase SLT domain ABK1_RS05805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABK1_RS05810 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS05815 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS05815 PF12911 N-terminal TM domain of oligopeptide transport permease C ABK1_RS05820 PF00005 ABC transporter ABK1_RS05820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABK1_RS05825 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS05825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABK1_RS05830 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS05830 PF00593 TonB dependent receptor ABK1_RS05840 PF00929 Exonuclease ABK1_RS05845 PF01979 Amidohydrolase family ABK1_RS05850 PF01590 GAF domain ABK1_RS05850 PF00563 EAL domain ABK1_RS05850 PF00360 Phytochrome region ABK1_RS05850 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS05855 PF00764 Arginosuccinate synthase ABK1_RS05860 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS05860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABK1_RS05875 PF05987 Bacterial protein of unknown function (DUF898) ABK1_RS05880 PF03180 NLPA lipoprotein ABK1_RS05900 PF13610 DDE domain ABK1_RS05910 PF13610 DDE domain ABK1_RS05915 PF13411 MerR HTH family regulatory protein ABK1_RS05920 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS05920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABK1_RS05920 PF00403 Heavy-metal-associated domain ABK1_RS05925 PF03203 MerC mercury resistance protein ABK1_RS05930 PF00403 Heavy-metal-associated domain ABK1_RS05935 PF02411 MerT mercuric transport protein ABK1_RS05940 PF09278 MerR, DNA binding ABK1_RS05940 PF00376 MerR family regulatory protein ABK1_RS05945 PF00665 Integrase core domain ABK1_RS05950 PF01695 IstB-like ATP binding protein ABK1_RS05960 PF00809 Pterin binding enzyme ABK1_RS05965 PF00893 Small Multidrug Resistance protein ABK1_RS05970 PF01909 Nucleotidyltransferase domain ABK1_RS05970 PF13427 Domain of unknown function (DUF4111) ABK1_RS05975 PF13495 Phage integrase, N-terminal SAM-like domain ABK1_RS05975 PF00589 Phage integrase family ABK1_RS05980 PF00583 Acetyltransferase (GNAT) family ABK1_RS05985 PF13427 Domain of unknown function (DUF4111) ABK1_RS05985 PF01909 Nucleotidyltransferase domain ABK1_RS05990 PF13610 DDE domain ABK1_RS06005 PF13610 DDE domain ABK1_RS06010 PF13700 Domain of unknown function (DUF4158) ABK1_RS06010 PF01526 Tn3 transposase DDE domain ABK1_RS06020 PF02219 Methylenetetrahydrofolate reductase ABK1_RS06025 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABK1_RS06025 PF05221 S-adenosyl-L-homocysteine hydrolase ABK1_RS06040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS06040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS06040 PF09317 Domain of unknown function (DUF1974) ABK1_RS06045 PF04055 Radical SAM superfamily ABK1_RS06050 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS06050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABK1_RS06065 PF07690 Major Facilitator Superfamily ABK1_RS06075 PF00557 Metallopeptidase family M24 ABK1_RS06080 PF00318 Ribosomal protein S2 ABK1_RS06085 PF00889 Elongation factor TS ABK1_RS06095 PF12833 Helix-turn-helix domain ABK1_RS06115 PF05036 Sporulation related domain ABK1_RS06115 PF03330 Lytic transglycolase ABK1_RS06120 PF13406 Transglycosylase SLT domain ABK1_RS06125 PF01098 Cell cycle protein ABK1_RS06135 PF14489 QueF-like protein ABK1_RS06135 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABK1_RS06140 PF01061 ABC-2 type transporter ABK1_RS06145 PF00005 ABC transporter ABK1_RS06175 PF00464 Serine hydroxymethyltransferase ABK1_RS06180 PF02321 Outer membrane efflux protein ABK1_RS06185 PF00873 AcrB/AcrD/AcrF family ABK1_RS06190 PF13533 Biotin-lipoyl like ABK1_RS06195 PF03466 LysR substrate binding domain ABK1_RS06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS06200 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABK1_RS06205 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS06210 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS06215 PF00005 ABC transporter ABK1_RS06220 PF00893 Small Multidrug Resistance protein ABK1_RS06225 PF00037 4Fe-4S binding domain ABK1_RS06230 PF01136 Peptidase family U32 ABK1_RS06230 PF16325 Peptidase family U32 C-terminal domain ABK1_RS06235 PF00155 Aminotransferase class I and II ABK1_RS06235 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS06240 PF02567 Phenazine biosynthesis-like protein ABK1_RS06245 PF00970 Oxidoreductase FAD-binding domain ABK1_RS06245 PF00175 Oxidoreductase NAD-binding domain ABK1_RS06250 PF18389 TrmO C-terminal domain ABK1_RS06250 PF01980 tRNA-methyltransferase O ABK1_RS06260 PF00437 Type II/IV secretion system protein ABK1_RS06260 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABK1_RS06270 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS06270 PF00072 Response regulator receiver domain ABK1_RS06275 PF08521 Two-component sensor kinase N-terminal ABK1_RS06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS06275 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS06285 PF00293 NUDIX domain ABK1_RS06295 PF14814 Bifunctional transglycosylase second domain ABK1_RS06295 PF00912 Transglycosylase ABK1_RS06295 PF00905 Penicillin binding protein transpeptidase domain ABK1_RS06300 PF01513 ATP-NAD kinase ABK1_RS06305 PF07023 Protein of unknown function (DUF1315) ABK1_RS06310 PF02885 Glycosyl transferase family, helical bundle domain ABK1_RS06310 PF00591 Glycosyl transferase family, a/b domain ABK1_RS06315 PF00375 Sodium:dicarboxylate symporter family ABK1_RS06320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS06320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS06320 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS06325 PF00756 Putative esterase ABK1_RS06330 PF01842 ACT domain ABK1_RS06330 PF01817 Chorismate mutase type II ABK1_RS06330 PF00800 Prephenate dehydratase ABK1_RS06335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABK1_RS06345 PF07687 Peptidase dimerisation domain ABK1_RS06345 PF01546 Peptidase family M20/M25/M40 ABK1_RS06350 PF12706 Beta-lactamase superfamily domain ABK1_RS06360 PF03883 Peroxide stress protein YaaA ABK1_RS06370 PF05690 Thiazole biosynthesis protein ThiG ABK1_RS06380 PF04241 Protein of unknown function (DUF423) ABK1_RS06385 PF04545 Sigma-70, region 4 ABK1_RS06385 PF04542 Sigma-70 region 2 ABK1_RS06385 PF00140 Sigma-70 factor, region 1.2 ABK1_RS06395 PF00313 'Cold-shock' DNA-binding domain ABK1_RS06400 PF00270 DEAD/DEAH box helicase ABK1_RS06400 PF00271 Helicase conserved C-terminal domain ABK1_RS06410 PF00881 Nitroreductase family ABK1_RS06415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABK1_RS06415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABK1_RS06435 PF01180 Dihydroorotate dehydrogenase ABK1_RS06440 PF02674 Colicin V production protein ABK1_RS06445 PF00156 Phosphoribosyl transferase domain ABK1_RS06460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABK1_RS06460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABK1_RS06465 PF01435 Peptidase family M48 ABK1_RS06470 PF09424 Yqey-like protein ABK1_RS06475 PF01165 Ribosomal protein S21 ABK1_RS06480 PF00814 Glycoprotease family ABK1_RS06500 PF00069 Protein kinase domain ABK1_RS06525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS06525 PF03466 LysR substrate binding domain ABK1_RS06530 PF00202 Aminotransferase class-III ABK1_RS06535 PF00171 Aldehyde dehydrogenase family ABK1_RS06540 PF00324 Amino acid permease ABK1_RS06550 PF13737 Transposase DDE domain ABK1_RS06575 PF04076 Bacterial OB fold (BOF) protein ABK1_RS06600 PF00561 alpha/beta hydrolase fold ABK1_RS06605 PF03616 Sodium/glutamate symporter ABK1_RS06615 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS06615 PF07729 FCD domain ABK1_RS06630 PF13737 Transposase DDE domain ABK1_RS06680 PF00083 Sugar (and other) transporter ABK1_RS06680 PF08946 Osmosensory transporter coiled coil ABK1_RS06700 PF00155 Aminotransferase class I and II ABK1_RS06705 PF06826 Predicted Permease Membrane Region ABK1_RS06705 PF02080 TrkA-C domain ABK1_RS06715 PF04403 Paraquat-inducible protein A ABK1_RS06720 PF02470 MlaD protein ABK1_RS06730 PF01177 Asp/Glu/Hydantoin racemase ABK1_RS06735 PF00892 EamA-like transporter family ABK1_RS06740 PF07995 Glucose / Sorbosone dehydrogenase ABK1_RS06760 PF00375 Sodium:dicarboxylate symporter family ABK1_RS06770 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABK1_RS06770 PF00753 Metallo-beta-lactamase superfamily ABK1_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS06780 PF00005 ABC transporter ABK1_RS06780 PF09383 NIL domain ABK1_RS06785 PF03180 NLPA lipoprotein ABK1_RS06790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABK1_RS06790 PF02844 Phosphoribosylglycinamide synthetase, N domain ABK1_RS06790 PF02843 Phosphoribosylglycinamide synthetase, C domain ABK1_RS06795 PF02142 MGS-like domain ABK1_RS06795 PF01808 AICARFT/IMPCHase bienzyme ABK1_RS06800 PF02954 Bacterial regulatory protein, Fis family ABK1_RS06820 PF01134 Glucose inhibited division protein A ABK1_RS06820 PF13932 GidA associated domain ABK1_RS06830 PF14403 Circularly permuted ATP-grasp type 2 ABK1_RS06840 PF08379 Bacterial transglutaminase-like N-terminal region ABK1_RS06840 PF01841 Transglutaminase-like superfamily ABK1_RS06850 PF00842 Alanine racemase, C-terminal domain ABK1_RS06850 PF01168 Alanine racemase, N-terminal domain ABK1_RS06855 PF03796 DnaB-like helicase C terminal domain ABK1_RS06855 PF00772 DnaB-like helicase N terminal domain ABK1_RS06860 PF01281 Ribosomal protein L9, N-terminal domain ABK1_RS06860 PF03948 Ribosomal protein L9, C-terminal domain ABK1_RS06865 PF01084 Ribosomal protein S18 ABK1_RS06870 PF01250 Ribosomal protein S6 ABK1_RS06875 PF01040 UbiA prenyltransferase family ABK1_RS06880 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABK1_RS06885 PF00510 Cytochrome c oxidase subunit III ABK1_RS06890 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABK1_RS06895 PF06481 COX Aromatic Rich Motif ABK1_RS06895 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABK1_RS06905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABK1_RS06905 PF02896 PEP-utilising enzyme, TIM barrel domain ABK1_RS06905 PF00391 PEP-utilising enzyme, mobile domain ABK1_RS06910 PF03618 Kinase/pyrophosphorylase ABK1_RS06920 PF14883 Hypothetical glycosyl hydrolase family 13 ABK1_RS06920 PF01522 Polysaccharide deacetylase ABK1_RS06925 PF00535 Glycosyl transferase family 2 ABK1_RS06930 PF13994 PgaD-like protein ABK1_RS06940 PF00296 Luciferase-like monooxygenase ABK1_RS06955 PF03466 LysR substrate binding domain ABK1_RS06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS06965 PF03462 PCRF domain ABK1_RS06965 PF00472 RF-1 domain ABK1_RS06970 PF17827 PrmC N-terminal domain ABK1_RS06970 PF13847 Methyltransferase domain ABK1_RS06975 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS06980 PF09084 NMT1/THI5 like ABK1_RS06985 PF12833 Helix-turn-helix domain ABK1_RS06990 PF00106 short chain dehydrogenase ABK1_RS06995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS06995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS06995 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS07000 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS07000 PF00501 AMP-binding enzyme ABK1_RS07005 PF01613 Flavin reductase like domain ABK1_RS07010 PF00899 ThiF family ABK1_RS07015 PF03109 ABC1 family ABK1_RS07030 PF03814 Potassium-transporting ATPase A subunit ABK1_RS07040 PF02669 K+-transporting ATPase, c chain ABK1_RS07045 PF13493 Domain of unknown function (DUF4118) ABK1_RS07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS07045 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS07045 PF02702 Osmosensitive K+ channel His kinase sensor domain ABK1_RS07050 PF00072 Response regulator receiver domain ABK1_RS07050 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS07055 PF00120 Glutamine synthetase, catalytic domain ABK1_RS07090 PF00216 Bacterial DNA-binding protein ABK1_RS07170 PF11985 Protein of unknown function (DUF3486) ABK1_RS07175 PF03237 Terminase-like family ABK1_RS07190 PF06074 Protein of unknown function (DUF935) ABK1_RS07195 PF04233 Phage Mu protein F like protein ABK1_RS07200 PF05069 Phage virion morphogenesis family ABK1_RS07215 PF10124 Mu-like prophage major head subunit gpT ABK1_RS07305 PF03232 Ubiquinone biosynthesis protein COQ7 ABK1_RS07310 PF07690 Major Facilitator Superfamily ABK1_RS07315 PF17243 POTRA domain TamA domain 1 ABK1_RS07315 PF07244 Surface antigen variable number repeat ABK1_RS07315 PF01103 Surface antigen ABK1_RS07330 PF11791 Aconitate B N-terminal domain ABK1_RS07330 PF06434 Aconitate hydratase 2 N-terminus ABK1_RS07330 PF00330 Aconitase family (aconitate hydratase) ABK1_RS07340 PF00027 Cyclic nucleotide-binding domain ABK1_RS07340 PF00520 Ion transport protein ABK1_RS07345 PF07690 Major Facilitator Superfamily ABK1_RS07360 PF03466 LysR substrate binding domain ABK1_RS07360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS07365 PF04284 Protein of unknown function (DUF441) ABK1_RS07375 PF00849 RNA pseudouridylate synthase ABK1_RS07375 PF01479 S4 domain ABK1_RS07390 PF01479 S4 domain ABK1_RS07390 PF00849 RNA pseudouridylate synthase ABK1_RS07395 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABK1_RS07400 PF08676 MutL C terminal dimerisation domain ABK1_RS07400 PF01119 DNA mismatch repair protein, C-terminal domain ABK1_RS07410 PF17209 Hfq protein ABK1_RS07420 PF00881 Nitroreductase family ABK1_RS07430 PF00149 Calcineurin-like phosphoesterase ABK1_RS07435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABK1_RS07440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABK1_RS07440 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABK1_RS07445 PF00117 Glutamine amidotransferase class-I ABK1_RS07445 PF00958 GMP synthase C terminal domain ABK1_RS07445 PF02540 NAD synthase ABK1_RS07450 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABK1_RS07455 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABK1_RS07460 PF13520 Amino acid permease ABK1_RS07465 PF00171 Aldehyde dehydrogenase family ABK1_RS07480 PF00465 Iron-containing alcohol dehydrogenase ABK1_RS07485 PF05970 PIF1-like helicase ABK1_RS07485 PF14493 Helix-turn-helix domain ABK1_RS07495 PF06445 GyrI-like small molecule binding domain ABK1_RS07500 PF02110 Hydroxyethylthiazole kinase family ABK1_RS07515 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABK1_RS07515 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABK1_RS07515 PF01433 Peptidase family M1 domain ABK1_RS07525 PF00106 short chain dehydrogenase ABK1_RS07535 PF01817 Chorismate mutase type II ABK1_RS07540 PF01037 Lrp/AsnC ligand binding domain ABK1_RS07550 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS07555 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS07555 PF00593 TonB dependent receptor ABK1_RS07560 PF00924 Mechanosensitive ion channel ABK1_RS07590 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS07590 PF00593 TonB dependent receptor ABK1_RS07610 PF12848 ABC transporter ABK1_RS07610 PF00005 ABC transporter ABK1_RS07615 PF00582 Universal stress protein family ABK1_RS07635 PF00689 Cation transporting ATPase, C-terminus ABK1_RS07635 PF00690 Cation transporter/ATPase, N-terminus ABK1_RS07640 PF02308 MgtC family ABK1_RS07645 PF03594 Benzoate membrane transport protein ABK1_RS07650 PF01037 Lrp/AsnC ligand binding domain ABK1_RS07655 PF01810 LysE type translocator ABK1_RS07660 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABK1_RS07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS07665 PF03466 LysR substrate binding domain ABK1_RS07675 PF00108 Thiolase, N-terminal domain ABK1_RS07675 PF02803 Thiolase, C-terminal domain ABK1_RS07685 PF01575 MaoC like domain ABK1_RS07690 PF00144 Beta-lactamase ABK1_RS07700 PF07690 Major Facilitator Superfamily ABK1_RS07705 PF12169 DNA polymerase III subunits gamma and tau domain III ABK1_RS07705 PF12170 DNA polymerase III tau subunit V interacting with alpha ABK1_RS07705 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABK1_RS07710 PF04185 Phosphoesterase family ABK1_RS07710 PF05506 Domain of unknown function (DUF756) ABK1_RS07715 PF03061 Thioesterase superfamily ABK1_RS07720 PF00465 Iron-containing alcohol dehydrogenase ABK1_RS07730 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABK1_RS07735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABK1_RS07735 PF01565 FAD binding domain ABK1_RS07750 PF01645 Conserved region in glutamate synthase ABK1_RS07765 PF13737 Transposase DDE domain ABK1_RS08030 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ABK1_RS08055 PF08525 Opacity-associated protein A N-terminal motif ABK1_RS08055 PF01476 LysM domain ABK1_RS08055 PF01551 Peptidase family M23 ABK1_RS08115 PF00589 Phage integrase family ABK1_RS08115 PF13356 Arm DNA-binding domain ABK1_RS08125 PF00854 POT family ABK1_RS08130 PF00120 Glutamine synthetase, catalytic domain ABK1_RS08130 PF03951 Glutamine synthetase, beta-Grasp domain ABK1_RS08135 PF04345 Chorismate lyase ABK1_RS08140 PF01040 UbiA prenyltransferase family ABK1_RS08175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABK1_RS08175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABK1_RS08180 PF01784 NIF3 (NGG1p interacting factor 3) ABK1_RS08185 PF13180 PDZ domain ABK1_RS08190 PF01743 Poly A polymerase head domain ABK1_RS08190 PF12627 Probable RNA and SrmB- binding site of polymerase A ABK1_RS08195 PF01515 Phosphate acetyl/butaryl transferase ABK1_RS08195 PF03949 Malic enzyme, NAD binding domain ABK1_RS08195 PF00390 Malic enzyme, N-terminal domain ABK1_RS08200 PF03707 Bacterial signalling protein N terminal repeat ABK1_RS08200 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS08200 PF00563 EAL domain ABK1_RS08205 PF04452 RNA methyltransferase ABK1_RS08210 PF02219 Methylenetetrahydrofolate reductase ABK1_RS08215 PF13610 DDE domain ABK1_RS08220 PF00583 Acetyltransferase (GNAT) family ABK1_RS08230 PF13610 DDE domain ABK1_RS08235 PF00743 Flavin-binding monooxygenase-like ABK1_RS08240 PF00106 short chain dehydrogenase ABK1_RS08250 PF17932 Tetracyclin repressor-like, C-terminal domain ABK1_RS08250 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS08255 PF17954 Quercetinase C-terminal cupin domain ABK1_RS08255 PF02678 Pirin ABK1_RS08265 PF00106 short chain dehydrogenase ABK1_RS08270 PF00743 Flavin-binding monooxygenase-like ABK1_RS08275 PF13737 Transposase DDE domain ABK1_RS08285 PF00860 Permease family ABK1_RS08290 PF00962 Adenosine/AMP deaminase ABK1_RS08295 PF01292 Prokaryotic cytochrome b561 ABK1_RS08305 PF01351 Ribonuclease HII ABK1_RS08310 PF02599 Global regulator protein family ABK1_RS08315 PF13840 ACT domain ABK1_RS08315 PF01842 ACT domain ABK1_RS08315 PF00696 Amino acid kinase family ABK1_RS08320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABK1_RS08320 PF01411 tRNA synthetases class II (A) ABK1_RS08320 PF02272 DHHA1 domain ABK1_RS08325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABK1_RS08325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABK1_RS08330 PF13393 Histidyl-tRNA synthetase ABK1_RS08335 PF00709 Adenylosuccinate synthetase ABK1_RS08350 PF00248 Aldo/keto reductase family ABK1_RS08355 PF13545 Crp-like helix-turn-helix domain ABK1_RS08355 PF00027 Cyclic nucleotide-binding domain ABK1_RS08360 PF02566 OsmC-like protein ABK1_RS08375 PF00004 ATPase family associated with various cellular activities (AAA) ABK1_RS08375 PF10431 C-terminal, D2-small domain, of ClpB protein ABK1_RS08375 PF17871 AAA lid domain ABK1_RS08375 PF02861 Clp amino terminal domain, pathogenicity island component ABK1_RS08375 PF07724 AAA domain (Cdc48 subfamily) ABK1_RS08390 PF01170 Putative RNA methylase family UPF0020 ABK1_RS08390 PF02926 THUMP domain ABK1_RS08390 PF10672 S-adenosylmethionine-dependent methyltransferase ABK1_RS08400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABK1_RS08400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABK1_RS08405 PF01979 Amidohydrolase family ABK1_RS08410 PF00691 OmpA family ABK1_RS08410 PF13488 Glycine zipper ABK1_RS08420 PF13417 Glutathione S-transferase, N-terminal domain ABK1_RS08420 PF00043 Glutathione S-transferase, C-terminal domain ABK1_RS08425 PF02390 Putative methyltransferase ABK1_RS08435 PF00043 Glutathione S-transferase, C-terminal domain ABK1_RS08435 PF02798 Glutathione S-transferase, N-terminal domain ABK1_RS08445 PF13192 Thioredoxin domain ABK1_RS08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS08465 PF00578 AhpC/TSA family ABK1_RS08465 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABK1_RS08470 PF00271 Helicase conserved C-terminal domain ABK1_RS08470 PF00270 DEAD/DEAH box helicase ABK1_RS08470 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABK1_RS08470 PF11898 Domain of unknown function (DUF3418) ABK1_RS08470 PF04408 Helicase associated domain (HA2) ABK1_RS08475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABK1_RS08475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABK1_RS08485 PF07690 Major Facilitator Superfamily ABK1_RS08490 PF03594 Benzoate membrane transport protein ABK1_RS08495 PF00106 short chain dehydrogenase ABK1_RS08500 PF00970 Oxidoreductase FAD-binding domain ABK1_RS08500 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS08500 PF00175 Oxidoreductase NAD-binding domain ABK1_RS08505 PF00866 Ring hydroxylating beta subunit ABK1_RS08510 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABK1_RS08510 PF00355 Rieske [2Fe-2S] domain ABK1_RS08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS08515 PF03466 LysR substrate binding domain ABK1_RS08525 PF00403 Heavy-metal-associated domain ABK1_RS08530 PF00376 MerR family regulatory protein ABK1_RS08530 PF09278 MerR, DNA binding ABK1_RS08565 PF02601 Exonuclease VII, large subunit ABK1_RS08565 PF13742 OB-fold nucleic acid binding domain ABK1_RS08600 PF01810 LysE type translocator ABK1_RS08605 PF00313 'Cold-shock' DNA-binding domain ABK1_RS08645 PF07690 Major Facilitator Superfamily ABK1_RS08650 PF01638 HxlR-like helix-turn-helix ABK1_RS08680 PF01406 tRNA synthetases class I (C) catalytic domain ABK1_RS08680 PF09190 DALR domain ABK1_RS08685 PF00571 CBS domain ABK1_RS08685 PF01380 SIS domain ABK1_RS08700 PF03968 OstA-like protein ABK1_RS08705 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABK1_RS08705 PF00005 ABC transporter ABK1_RS08710 PF02321 Outer membrane efflux protein ABK1_RS08715 PF00664 ABC transporter transmembrane region ABK1_RS08715 PF03412 Peptidase C39 family ABK1_RS08715 PF00005 ABC transporter ABK1_RS08725 PF01205 Uncharacterized protein family UPF0029 ABK1_RS08730 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS08740 PF01596 O-methyltransferase ABK1_RS08750 PF00037 4Fe-4S binding domain ABK1_RS08750 PF11953 Domain of unknown function (DUF3470) ABK1_RS08760 PF05190 MutS family domain IV ABK1_RS08760 PF00488 MutS domain V ABK1_RS08760 PF05192 MutS domain III ABK1_RS08760 PF01624 MutS domain I ABK1_RS08760 PF05188 MutS domain II ABK1_RS08765 PF01037 Lrp/AsnC ligand binding domain ABK1_RS08770 PF00892 EamA-like transporter family ABK1_RS08775 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS08775 PF00563 EAL domain ABK1_RS08775 PF03707 Bacterial signalling protein N terminal repeat ABK1_RS08780 PF03279 Bacterial lipid A biosynthesis acyltransferase ABK1_RS08790 PF07690 Major Facilitator Superfamily ABK1_RS08810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABK1_RS08810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABK1_RS08825 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS08835 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABK1_RS08835 PF04717 Type VI secretion system, phage-baseplate injector ABK1_RS08835 PF13296 Putative type VI secretion system Rhs element Vgr ABK1_RS08840 PF05593 RHS Repeat ABK1_RS08840 PF03527 RHS protein ABK1_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS08855 PF03466 LysR substrate binding domain ABK1_RS08860 PF01566 Natural resistance-associated macrophage protein ABK1_RS08865 PF03746 LamB/YcsF family ABK1_RS08870 PF07286 Protein of unknown function (DUF1445) ABK1_RS08880 PF02785 Biotin carboxylase C-terminal domain ABK1_RS08880 PF00289 Biotin carboxylase, N-terminal domain ABK1_RS08880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABK1_RS08880 PF00364 Biotin-requiring enzyme ABK1_RS08885 PF00654 Voltage gated chloride channel ABK1_RS08910 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS08935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABK1_RS08935 PF00289 Biotin carboxylase, N-terminal domain ABK1_RS08935 PF02785 Biotin carboxylase C-terminal domain ABK1_RS08940 PF02525 Flavodoxin-like fold ABK1_RS08945 PF01638 HxlR-like helix-turn-helix ABK1_RS08960 PF01402 Ribbon-helix-helix protein, copG family ABK1_RS08960 PF08753 NikR C terminal nickel binding domain ABK1_RS08965 PF01425 Amidase ABK1_RS08970 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABK1_RS08975 PF00005 ABC transporter ABK1_RS09000 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ABK1_RS09015 PF05947 Type VI secretion system, TssF ABK1_RS09030 PF06761 Intracellular multiplication and human macrophage-killing ABK1_RS09030 PF06744 Type VI secretion protein IcmF C-terminal ABK1_RS09030 PF14331 ImcF-related N-terminal domain ABK1_RS09035 PF13737 Transposase DDE domain ABK1_RS09050 PF01389 OmpA-like transmembrane domain ABK1_RS09050 PF00691 OmpA family ABK1_RS09060 PF10431 C-terminal, D2-small domain, of ClpB protein ABK1_RS09060 PF07724 AAA domain (Cdc48 subfamily) ABK1_RS09060 PF17871 AAA lid domain ABK1_RS09060 PF00004 ATPase family associated with various cellular activities (AAA) ABK1_RS09065 PF06812 ImpA, N-terminal, type VI secretion system ABK1_RS09070 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ABK1_RS09090 PF03466 LysR substrate binding domain ABK1_RS09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABK1_RS09105 PF07690 Major Facilitator Superfamily ABK1_RS09120 PF02677 Epoxyqueuosine reductase QueH ABK1_RS09125 PF13737 Transposase DDE domain ABK1_RS09135 PF09278 MerR, DNA binding ABK1_RS09135 PF00376 MerR family regulatory protein ABK1_RS09145 PF00701 Dihydrodipicolinate synthetase family ABK1_RS09155 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS09160 PF05544 Proline racemase ABK1_RS09165 PF01266 FAD dependent oxidoreductase ABK1_RS09175 PF04324 BFD-like [2Fe-2S] binding domain ABK1_RS09175 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS09185 PF00083 Sugar (and other) transporter ABK1_RS09190 PF00171 Aldehyde dehydrogenase family ABK1_RS09195 PF13520 Amino acid permease ABK1_RS09200 PF03315 Serine dehydratase beta chain ABK1_RS09200 PF03313 Serine dehydratase alpha chain ABK1_RS09205 PF01575 MaoC like domain ABK1_RS09205 PF00171 Aldehyde dehydrogenase family ABK1_RS09210 PF05138 Phenylacetic acid catabolic protein ABK1_RS09215 PF06243 Phenylacetic acid degradation B ABK1_RS09220 PF05138 Phenylacetic acid catabolic protein ABK1_RS09225 PF01883 Iron-sulfur cluster assembly protein ABK1_RS09230 PF00175 Oxidoreductase NAD-binding domain ABK1_RS09230 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS09230 PF00970 Oxidoreductase FAD-binding domain ABK1_RS09235 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS09240 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS09245 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABK1_RS09245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABK1_RS09245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABK1_RS09250 PF02803 Thiolase, C-terminal domain ABK1_RS09250 PF00108 Thiolase, N-terminal domain ABK1_RS09255 PF14535 AMP-binding enzyme C-terminal domain ABK1_RS09255 PF00501 AMP-binding enzyme ABK1_RS09260 PF08223 PaaX-like protein C-terminal domain ABK1_RS09260 PF07848 PaaX-like protein ABK1_RS09265 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS09270 PF03061 Thioesterase superfamily ABK1_RS09290 PF13737 Transposase DDE domain ABK1_RS09315 PF00199 Catalase ABK1_RS09320 PF01292 Prokaryotic cytochrome b561 ABK1_RS09340 PF12697 Alpha/beta hydrolase family ABK1_RS09345 PF01613 Flavin reductase like domain ABK1_RS09350 PF00296 Luciferase-like monooxygenase ABK1_RS09355 PF00171 Aldehyde dehydrogenase family ABK1_RS09360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABK1_RS09370 PF00171 Aldehyde dehydrogenase family ABK1_RS09375 PF02627 Carboxymuconolactone decarboxylase family ABK1_RS09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09380 PF03466 LysR substrate binding domain ABK1_RS09385 PF02525 Flavodoxin-like fold ABK1_RS09390 PF09339 IclR helix-turn-helix domain ABK1_RS09390 PF01614 Bacterial transcriptional regulator ABK1_RS09395 PF01494 FAD binding domain ABK1_RS09400 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS09400 PF07702 UTRA domain ABK1_RS09410 PF08402 TOBE domain ABK1_RS09410 PF00005 ABC transporter ABK1_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS09420 PF01266 FAD dependent oxidoreductase ABK1_RS09425 PF00266 Aminotransferase class-V ABK1_RS09430 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS09435 PF07690 Major Facilitator Superfamily ABK1_RS09440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS09440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS09440 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS09445 PF02515 CoA-transferase family III ABK1_RS09460 PF09339 IclR helix-turn-helix domain ABK1_RS09465 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS09470 PF03060 Nitronate monooxygenase ABK1_RS09475 PF07690 Major Facilitator Superfamily ABK1_RS09480 PF09339 IclR helix-turn-helix domain ABK1_RS09485 PF00108 Thiolase, N-terminal domain ABK1_RS09485 PF02803 Thiolase, C-terminal domain ABK1_RS09490 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABK1_RS09490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABK1_RS09490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABK1_RS09500 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS09505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS09505 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS09505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS09510 PF07690 Major Facilitator Superfamily ABK1_RS09515 PF01144 Coenzyme A transferase ABK1_RS09520 PF01144 Coenzyme A transferase ABK1_RS09530 PF07690 Major Facilitator Superfamily ABK1_RS09540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS09540 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS09540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS09540 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABK1_RS09555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09555 PF03466 LysR substrate binding domain ABK1_RS09560 PF00682 HMGL-like ABK1_RS09565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABK1_RS09565 PF02785 Biotin carboxylase C-terminal domain ABK1_RS09565 PF00364 Biotin-requiring enzyme ABK1_RS09565 PF18140 Propionyl-coenzyme A carboxylase BT domain ABK1_RS09565 PF00289 Biotin carboxylase, N-terminal domain ABK1_RS09570 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS09575 PF01039 Carboxyl transferase domain ABK1_RS09580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS09580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS09580 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS09585 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS09590 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS09590 PF00501 AMP-binding enzyme ABK1_RS09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09610 PF03466 LysR substrate binding domain ABK1_RS09645 PF00994 Probable molybdopterin binding domain ABK1_RS09645 PF02464 Competence-damaged protein ABK1_RS09645 PF18146 Damage-inducible protein CinA KH domain ABK1_RS09655 PF00199 Catalase ABK1_RS09655 PF06628 Catalase-related immune-responsive ABK1_RS09655 PF18011 C-terminal domain found in long catalases ABK1_RS09670 PF13737 Transposase DDE domain ABK1_RS09685 PF00717 Peptidase S24-like ABK1_RS09695 PF01037 Lrp/AsnC ligand binding domain ABK1_RS09695 PF13404 AsnC-type helix-turn-helix domain ABK1_RS09710 PF13737 Transposase DDE domain ABK1_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS09715 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS09715 PF09308 LuxQ, periplasmic ABK1_RS09715 PF00072 Response regulator receiver domain ABK1_RS09720 PF00072 Response regulator receiver domain ABK1_RS09730 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS09735 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS09740 PF00005 ABC transporter ABK1_RS09745 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABK1_RS09750 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABK1_RS09755 PF03466 LysR substrate binding domain ABK1_RS09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09760 PF01810 LysE type translocator ABK1_RS09765 PF00266 Aminotransferase class-V ABK1_RS09775 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS09780 PF00581 Rhodanese-like domain ABK1_RS09790 PF03466 LysR substrate binding domain ABK1_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09795 PF02798 Glutathione S-transferase, N-terminal domain ABK1_RS09800 PF02798 Glutathione S-transferase, N-terminal domain ABK1_RS09800 PF14834 Glutathione S-transferase, C-terminal domain ABK1_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09805 PF03466 LysR substrate binding domain ABK1_RS09810 PF03788 LrgA family ABK1_RS09815 PF04172 LrgB-like family ABK1_RS09820 PF00155 Aminotransferase class I and II ABK1_RS09820 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS09840 PF16957 Malonate decarboxylase, alpha subunit, transporter ABK1_RS09845 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABK1_RS09850 PF06857 Malonate decarboxylase delta subunit (MdcD) ABK1_RS09855 PF01039 Carboxyl transferase domain ABK1_RS09865 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ABK1_RS09870 PF00698 Acyl transferase domain ABK1_RS09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09885 PF03466 LysR substrate binding domain ABK1_RS09890 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS09890 PF00155 Aminotransferase class I and II ABK1_RS09900 PF02322 Cytochrome bd terminal oxidase subunit II ABK1_RS09905 PF01654 Cytochrome bd terminal oxidase subunit I ABK1_RS09915 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS09915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS09915 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS09920 PF00296 Luciferase-like monooxygenase ABK1_RS09925 PF00083 Sugar (and other) transporter ABK1_RS09950 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABK1_RS09955 PF00005 ABC transporter ABK1_RS09960 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS09965 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABK1_RS09970 PF01177 Asp/Glu/Hydantoin racemase ABK1_RS09975 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABK1_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS09985 PF03466 LysR substrate binding domain ABK1_RS09995 PF13382 Adenine deaminase C-terminal domain ABK1_RS09995 PF01979 Amidohydrolase family ABK1_RS10005 PF03960 ArsC family ABK1_RS10010 PF01022 Bacterial regulatory protein, arsR family ABK1_RS10015 PF01758 Sodium Bile acid symporter family ABK1_RS10020 PF03466 LysR substrate binding domain ABK1_RS10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS10035 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS10035 PF13192 Thioredoxin domain ABK1_RS10050 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS10055 PF00588 SpoU rRNA Methylase family ABK1_RS10060 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABK1_RS10060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABK1_RS10060 PF14579 Helix-hairpin-helix motif ABK1_RS10060 PF02811 PHP domain ABK1_RS10060 PF01336 OB-fold nucleic acid binding domain ABK1_RS10065 PF17763 Glutaminase/Asparaginase C-terminal domain ABK1_RS10065 PF00710 Asparaginase, N-terminal ABK1_RS10070 PF00375 Sodium:dicarboxylate symporter family ABK1_RS10075 PF00155 Aminotransferase class I and II ABK1_RS10080 PF01641 SelR domain ABK1_RS10085 PF00255 Glutathione peroxidase ABK1_RS10090 PF12833 Helix-turn-helix domain ABK1_RS10090 PF12852 Cupin ABK1_RS10100 PF00155 Aminotransferase class I and II ABK1_RS10105 PF01966 HD domain ABK1_RS10105 PF08335 GlnD PII-uridylyltransferase ABK1_RS10105 PF01909 Nucleotidyltransferase domain ABK1_RS10110 PF02222 ATP-grasp domain ABK1_RS10120 PF05437 Branched-chain amino acid transport protein (AzlD) ABK1_RS10125 PF03591 AzlC protein ABK1_RS10150 PF01926 50S ribosome-binding GTPase ABK1_RS10150 PF06071 Protein of unknown function (DUF933) ABK1_RS10155 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS10160 PF09383 NIL domain ABK1_RS10160 PF00005 ABC transporter ABK1_RS10165 PF03180 NLPA lipoprotein ABK1_RS10170 PF03180 NLPA lipoprotein ABK1_RS10175 PF00296 Luciferase-like monooxygenase ABK1_RS10185 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS10185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS10200 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS10205 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS10210 PF00005 ABC transporter ABK1_RS10220 PF01037 Lrp/AsnC ligand binding domain ABK1_RS10225 PF01709 Transcriptional regulator ABK1_RS10235 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS10255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS10255 PF03466 LysR substrate binding domain ABK1_RS10265 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABK1_RS10275 PF00892 EamA-like transporter family ABK1_RS10295 PF13953 PapC C-terminal domain ABK1_RS10295 PF00577 Outer membrane usher protein ABK1_RS10295 PF13954 PapC N-terminal domain ABK1_RS10300 PF02753 Pili assembly chaperone PapD, C-terminal domain ABK1_RS10300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABK1_RS10305 PF16970 Type-1 fimbrial protein, A ABK1_RS10310 PF13737 Transposase DDE domain ABK1_RS10325 PF04055 Radical SAM superfamily ABK1_RS10325 PF06968 Biotin and Thiamin Synthesis associated domain ABK1_RS10330 PF08331 Domain of unknown function (DUF1730) ABK1_RS10335 PF03853 YjeF-related protein N-terminus ABK1_RS10335 PF01256 Carbohydrate kinase ABK1_RS10340 PF02075 Crossover junction endodeoxyribonuclease RuvC ABK1_RS10355 PF00905 Penicillin binding protein transpeptidase domain ABK1_RS10385 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABK1_RS10385 PF02772 S-adenosylmethionine synthetase, central domain ABK1_RS10385 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABK1_RS10390 PF02780 Transketolase, C-terminal domain ABK1_RS10390 PF00456 Transketolase, thiamine diphosphate binding domain ABK1_RS10390 PF02779 Transketolase, pyrimidine binding domain ABK1_RS10400 PF04264 YceI-like domain ABK1_RS10410 PF09992 Phosphodiester glycosidase ABK1_RS10420 PF05958 tRNA (Uracil-5-)-methyltransferase ABK1_RS10425 PF04229 GrpB protein ABK1_RS10430 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABK1_RS10430 PF01619 Proline dehydrogenase ABK1_RS10430 PF00171 Aldehyde dehydrogenase family ABK1_RS10430 PF14850 DNA-binding domain of Proline dehydrogenase ABK1_RS10435 PF01037 Lrp/AsnC ligand binding domain ABK1_RS10440 PF00474 Sodium:solute symporter family ABK1_RS10445 PF02146 Sir2 family ABK1_RS10450 PF01597 Glycine cleavage H-protein ABK1_RS10455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABK1_RS10455 PF12833 Helix-turn-helix domain ABK1_RS10465 PF00005 ABC transporter ABK1_RS10465 PF00664 ABC transporter transmembrane region ABK1_RS10470 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABK1_RS10475 PF06912 Protein of unknown function (DUF1275) ABK1_RS10480 PF00375 Sodium:dicarboxylate symporter family ABK1_RS10495 PF08007 Cupin superfamily protein ABK1_RS10500 PF02545 Maf-like protein ABK1_RS10510 PF00162 Phosphoglycerate kinase ABK1_RS10520 PF01116 Fructose-bisphosphate aldolase class-II ABK1_RS10525 PF00639 PPIC-type PPIASE domain ABK1_RS10525 PF09312 SurA N-terminal domain ABK1_RS10530 PF03968 OstA-like protein ABK1_RS10530 PF04453 LPS transport system D ABK1_RS10535 PF01636 Phosphotransferase enzyme family ABK1_RS10540 PF00483 Nucleotidyl transferase ABK1_RS10545 PF02527 rRNA small subunit methyltransferase G ABK1_RS10550 PF13614 AAA domain ABK1_RS10555 PF02195 ParB-like nuclease domain ABK1_RS10555 PF17762 HTH domain found in ParB protein ABK1_RS10560 PF01618 MotA/TolQ/ExbB proton channel family ABK1_RS10570 PF00664 ABC transporter transmembrane region ABK1_RS10570 PF00005 ABC transporter ABK1_RS10575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABK1_RS10580 PF02348 Cytidylyltransferase ABK1_RS10585 PF09115 DNA polymerase III, delta subunit, C terminal ABK1_RS10595 PF01026 TatD related DNase ABK1_RS10610 PF02501 Type II secretion system (T2SS), protein I ABK1_RS10610 PF07963 Prokaryotic N-terminal methylation motif ABK1_RS10615 PF11612 Type II secretion system (T2SS), protein J ABK1_RS10615 PF07963 Prokaryotic N-terminal methylation motif ABK1_RS10620 PF03934 Type II secretion system (T2SS), protein K ABK1_RS10630 PF03167 Uracil DNA glycosylase superfamily ABK1_RS10640 PF14437 MafB19-like deaminase ABK1_RS10650 PF02224 Cytidylate kinase ABK1_RS10655 PF00575 S1 RNA binding domain ABK1_RS10660 PF00216 Bacterial DNA-binding protein ABK1_RS10670 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABK1_RS10680 PF00743 Flavin-binding monooxygenase-like ABK1_RS10690 PF03969 AFG1-like ATPase ABK1_RS10695 PF01274 Malate synthase ABK1_RS10705 PF02472 Biopolymer transport protein ExbD/TolR ABK1_RS10710 PF02472 Biopolymer transport protein ExbD/TolR ABK1_RS10715 PF01618 MotA/TolQ/ExbB proton channel family ABK1_RS10725 PF00593 TonB dependent receptor ABK1_RS10725 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS10740 PF01432 Peptidase family M3 ABK1_RS10745 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS10755 PF00005 ABC transporter ABK1_RS10755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABK1_RS10770 PF00459 Inositol monophosphatase family ABK1_RS10780 PF01649 Ribosomal protein S20 ABK1_RS10785 PF13460 NAD(P)H-binding ABK1_RS10790 PF03737 Aldolase/RraA ABK1_RS10810 PF17757 UvrB interaction domain ABK1_RS10810 PF00271 Helicase conserved C-terminal domain ABK1_RS10810 PF00270 DEAD/DEAH box helicase ABK1_RS10810 PF02559 CarD-like/TRCF domain ABK1_RS10810 PF03461 TRCF domain ABK1_RS10820 PF00211 Adenylate and Guanylate cyclase catalytic domain ABK1_RS10825 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS10830 PF00012 Hsp70 protein ABK1_RS10835 PF00226 DnaJ domain ABK1_RS10835 PF07743 HSCB C-terminal oligomerisation domain ABK1_RS10840 PF01521 Iron-sulphur cluster biosynthesis ABK1_RS10845 PF01592 NifU-like N terminal domain ABK1_RS10850 PF00266 Aminotransferase class-V ABK1_RS10855 PF02082 Transcriptional regulator ABK1_RS10870 PF00216 Bacterial DNA-binding protein ABK1_RS10875 PF00639 PPIC-type PPIASE domain ABK1_RS10875 PF09312 SurA N-terminal domain ABK1_RS10880 PF12852 Cupin ABK1_RS10880 PF12833 Helix-turn-helix domain ABK1_RS10885 PF00487 Fatty acid desaturase ABK1_RS10890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS10890 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS10890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS10895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS10895 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS10895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS10900 PF03109 ABC1 family ABK1_RS10910 PF04073 Aminoacyl-tRNA editing domain ABK1_RS10915 PF06276 Ferric iron reductase FhuF-like transporter ABK1_RS10915 PF04183 IucA / IucC family ABK1_RS10920 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABK1_RS10925 PF07690 Major Facilitator Superfamily ABK1_RS10930 PF04183 IucA / IucC family ABK1_RS10930 PF06276 Ferric iron reductase FhuF-like transporter ABK1_RS10935 PF06276 Ferric iron reductase FhuF-like transporter ABK1_RS10935 PF04183 IucA / IucC family ABK1_RS10950 PF00593 TonB dependent receptor ABK1_RS10950 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS10975 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS10985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABK1_RS10990 PF02277 Phosphoribosyltransferase ABK1_RS11005 PF02654 Cobalamin-5-phosphate synthase ABK1_RS11010 PF00793 DAHP synthetase I family ABK1_RS11015 PF01925 Sulfite exporter TauE/SafE ABK1_RS11035 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS11035 PF00593 TonB dependent receptor ABK1_RS11040 PF02684 Lipid-A-disaccharide synthetase ABK1_RS11050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABK1_RS11055 PF00005 ABC transporter ABK1_RS11090 PF01230 HIT domain ABK1_RS11120 PF08241 Methyltransferase domain ABK1_RS11125 PF00561 alpha/beta hydrolase fold ABK1_RS11130 PF01053 Cys/Met metabolism PLP-dependent enzyme ABK1_RS11140 PF02575 YbaB/EbfC DNA-binding family ABK1_RS11145 PF02132 RecR protein ABK1_RS11145 PF13662 Toprim domain ABK1_RS11150 PF00570 HRDC domain ABK1_RS11150 PF01612 3'-5' exonuclease ABK1_RS11170 PF05166 YcgL domain ABK1_RS11180 PF01434 Peptidase family M41 ABK1_RS11180 PF17862 AAA+ lid domain ABK1_RS11180 PF00004 ATPase family associated with various cellular activities (AAA) ABK1_RS11190 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS11195 PF05175 Methyltransferase small domain ABK1_RS11200 PF01264 Chorismate synthase ABK1_RS11205 PF08448 PAS fold ABK1_RS11205 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS11220 PF04055 Radical SAM superfamily ABK1_RS11225 PF00676 Dehydrogenase E1 component ABK1_RS11230 PF02779 Transketolase, pyrimidine binding domain ABK1_RS11230 PF02780 Transketolase, C-terminal domain ABK1_RS11235 PF00364 Biotin-requiring enzyme ABK1_RS11235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABK1_RS11235 PF02817 e3 binding domain ABK1_RS11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS11240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABK1_RS11245 PF00106 short chain dehydrogenase ABK1_RS11250 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS11250 PF00107 Zinc-binding dehydrogenase ABK1_RS11255 PF01062 Bestrophin, RFP-TM, chloride channel ABK1_RS11260 PF00072 Response regulator receiver domain ABK1_RS11260 PF00158 Sigma-54 interaction domain ABK1_RS11260 PF02954 Bacterial regulatory protein, Fis family ABK1_RS11265 PF04273 Putative phosphatase (DUF442) ABK1_RS11265 PF00753 Metallo-beta-lactamase superfamily ABK1_RS11270 PF04273 Putative phosphatase (DUF442) ABK1_RS11270 PF00753 Metallo-beta-lactamase superfamily ABK1_RS11275 PF01925 Sulfite exporter TauE/SafE ABK1_RS11290 PF12833 Helix-turn-helix domain ABK1_RS11290 PF06445 GyrI-like small molecule binding domain ABK1_RS11295 PF01638 HxlR-like helix-turn-helix ABK1_RS11300 PF02525 Flavodoxin-like fold ABK1_RS11310 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS11310 PF07702 UTRA domain ABK1_RS11325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABK1_RS11330 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS11335 PF00005 ABC transporter ABK1_RS11350 PF00083 Sugar (and other) transporter ABK1_RS11355 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS11355 PF00593 TonB dependent receptor ABK1_RS11360 PF10415 Fumarase C C-terminus ABK1_RS11360 PF00206 Lyase ABK1_RS11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS11375 PF03466 LysR substrate binding domain ABK1_RS11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS11380 PF03466 LysR substrate binding domain ABK1_RS11385 PF00108 Thiolase, N-terminal domain ABK1_RS11385 PF02803 Thiolase, C-terminal domain ABK1_RS11390 PF02667 Short chain fatty acid transporter ABK1_RS11395 PF01144 Coenzyme A transferase ABK1_RS11400 PF01144 Coenzyme A transferase ABK1_RS11405 PF03466 LysR substrate binding domain ABK1_RS11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS11425 PF12833 Helix-turn-helix domain ABK1_RS11425 PF06719 AraC-type transcriptional regulator N-terminus ABK1_RS11430 PF07690 Major Facilitator Superfamily ABK1_RS11435 PF01738 Dienelactone hydrolase family ABK1_RS11450 PF01613 Flavin reductase like domain ABK1_RS11460 PF14525 AraC-binding-like domain ABK1_RS11460 PF12833 Helix-turn-helix domain ABK1_RS11465 PF00970 Oxidoreductase FAD-binding domain ABK1_RS11465 PF00175 Oxidoreductase NAD-binding domain ABK1_RS11465 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS11470 PF00866 Ring hydroxylating beta subunit ABK1_RS11475 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABK1_RS11475 PF00355 Rieske [2Fe-2S] domain ABK1_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS11480 PF03459 TOBE domain ABK1_RS11490 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS11495 PF00005 ABC transporter ABK1_RS11495 PF03459 TOBE domain ABK1_RS11500 PF00106 short chain dehydrogenase ABK1_RS11505 PF00550 Phosphopantetheine attachment site ABK1_RS11505 PF00857 Isochorismatase family ABK1_RS11515 PF00149 Calcineurin-like phosphoesterase ABK1_RS11520 PF13089 Polyphosphate kinase N-terminal domain ABK1_RS11520 PF02503 Polyphosphate kinase middle domain ABK1_RS11520 PF13090 Polyphosphate kinase C-terminal domain 2 ABK1_RS11520 PF17941 Polyphosphate kinase C-terminal domain 1 ABK1_RS11525 PF12706 Beta-lactamase superfamily domain ABK1_RS11530 PF03070 TENA/THI-4/PQQC family ABK1_RS11535 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABK1_RS11540 PF13186 Iron-sulfur cluster-binding domain ABK1_RS11540 PF04055 Radical SAM superfamily ABK1_RS11545 PF01244 Membrane dipeptidase (Peptidase family M19) ABK1_RS11565 PF13091 PLD-like domain ABK1_RS11580 PF00199 Catalase ABK1_RS11590 PF00107 Zinc-binding dehydrogenase ABK1_RS11590 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS11600 PF00419 Fimbrial protein ABK1_RS11605 PF00577 Outer membrane usher protein ABK1_RS11605 PF13953 PapC C-terminal domain ABK1_RS11605 PF13954 PapC N-terminal domain ABK1_RS11610 PF02753 Pili assembly chaperone PapD, C-terminal domain ABK1_RS11610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABK1_RS11635 PF01266 FAD dependent oxidoreductase ABK1_RS11650 PF01593 Flavin containing amine oxidoreductase ABK1_RS11655 PF00743 Flavin-binding monooxygenase-like ABK1_RS11660 PF12146 Serine aminopeptidase, S33 ABK1_RS11665 PF02321 Outer membrane efflux protein ABK1_RS11670 PF00873 AcrB/AcrD/AcrF family ABK1_RS11675 PF00529 HlyD membrane-fusion protein of T1SS ABK1_RS11675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABK1_RS11680 PF00072 Response regulator receiver domain ABK1_RS11680 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS11695 PF02311 AraC-like ligand binding domain ABK1_RS11695 PF12833 Helix-turn-helix domain ABK1_RS11700 PF12146 Serine aminopeptidase, S33 ABK1_RS11735 PF13737 Transposase DDE domain ABK1_RS11755 PF13291 ACT domain ABK1_RS11755 PF04607 Region found in RelA / SpoT proteins ABK1_RS11755 PF02824 TGS domain ABK1_RS11765 PF01975 Survival protein SurE ABK1_RS11790 PF07690 Major Facilitator Superfamily ABK1_RS11795 PF13533 Biotin-lipoyl like ABK1_RS11800 PF01425 Amidase ABK1_RS11825 PF13737 Transposase DDE domain ABK1_RS11845 PF13737 Transposase DDE domain ABK1_RS11890 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABK1_RS11895 PF14572 Phosphoribosyl synthetase-associated domain ABK1_RS11895 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABK1_RS11915 PF00005 ABC transporter ABK1_RS11920 PF01032 FecCD transport family ABK1_RS11930 PF00107 Zinc-binding dehydrogenase ABK1_RS11930 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS11945 PF06719 AraC-type transcriptional regulator N-terminus ABK1_RS11945 PF12833 Helix-turn-helix domain ABK1_RS11950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABK1_RS11950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABK1_RS11955 PF07690 Major Facilitator Superfamily ABK1_RS11960 PF01370 NAD dependent epimerase/dehydratase family ABK1_RS11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS11965 PF03466 LysR substrate binding domain ABK1_RS11975 PF00920 Dehydratase family ABK1_RS11980 PF00171 Aldehyde dehydrogenase family ABK1_RS11995 PF00529 HlyD membrane-fusion protein of T1SS ABK1_RS11995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABK1_RS12015 PF03737 Aldolase/RraA ABK1_RS12020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABK1_RS12020 PF01842 ACT domain ABK1_RS12020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABK1_RS12025 PF07690 Major Facilitator Superfamily ABK1_RS12045 PF03466 LysR substrate binding domain ABK1_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS12055 PF08450 SMP-30/Gluconolactonase/LRE-like region ABK1_RS12060 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS12060 PF07702 UTRA domain ABK1_RS12070 PF04909 Amidohydrolase ABK1_RS12075 PF07690 Major Facilitator Superfamily ABK1_RS12095 PF08479 POTRA domain, ShlB-type ABK1_RS12095 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABK1_RS12095 PF17287 POTRA domain ABK1_RS12105 PF07687 Peptidase dimerisation domain ABK1_RS12105 PF01546 Peptidase family M20/M25/M40 ABK1_RS12115 PF00999 Sodium/hydrogen exchanger family ABK1_RS12115 PF02254 TrkA-N domain ABK1_RS12120 PF07995 Glucose / Sorbosone dehydrogenase ABK1_RS12125 PF03466 LysR substrate binding domain ABK1_RS12125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS12130 PF00857 Isochorismatase family ABK1_RS12140 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS12140 PF08359 YsiA-like protein, C-terminal region ABK1_RS12145 PF12706 Beta-lactamase superfamily domain ABK1_RS12155 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS12165 PF00376 MerR family regulatory protein ABK1_RS12165 PF09278 MerR, DNA binding ABK1_RS12170 PF01872 RibD C-terminal domain ABK1_RS12175 PF00106 short chain dehydrogenase ABK1_RS12180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABK1_RS12180 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS12195 PF01047 MarR family ABK1_RS12200 PF07859 alpha/beta hydrolase fold ABK1_RS12220 PF00199 Catalase ABK1_RS12220 PF06628 Catalase-related immune-responsive ABK1_RS12225 PF00561 alpha/beta hydrolase fold ABK1_RS12245 PF00171 Aldehyde dehydrogenase family ABK1_RS12250 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS12250 PF00107 Zinc-binding dehydrogenase ABK1_RS12255 PF00474 Sodium:solute symporter family ABK1_RS12260 PF04341 Protein of unknown function, DUF485 ABK1_RS12265 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS12265 PF00501 AMP-binding enzyme ABK1_RS12270 PF06506 Propionate catabolism activator ABK1_RS12270 PF00158 Sigma-54 interaction domain ABK1_RS12270 PF02954 Bacterial regulatory protein, Fis family ABK1_RS12280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS12280 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS12280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS12300 PF00171 Aldehyde dehydrogenase family ABK1_RS12310 PF07690 Major Facilitator Superfamily ABK1_RS12315 PF00920 Dehydratase family ABK1_RS12320 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS12320 PF07729 FCD domain ABK1_RS12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS12330 PF03466 LysR substrate binding domain ABK1_RS12335 PF13378 Enolase C-terminal domain-like ABK1_RS12335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABK1_RS12340 PF02426 Muconolactone delta-isomerase ABK1_RS12345 PF00775 Dioxygenase ABK1_RS12345 PF04444 Catechol dioxygenase N terminus ABK1_RS12350 PF01144 Coenzyme A transferase ABK1_RS12355 PF01144 Coenzyme A transferase ABK1_RS12360 PF00108 Thiolase, N-terminal domain ABK1_RS12360 PF02803 Thiolase, C-terminal domain ABK1_RS12365 PF12146 Serine aminopeptidase, S33 ABK1_RS12370 PF01804 Penicillin amidase ABK1_RS12375 PF00171 Aldehyde dehydrogenase family ABK1_RS12390 PF02311 AraC-like ligand binding domain ABK1_RS12390 PF12833 Helix-turn-helix domain ABK1_RS12395 PF01613 Flavin reductase like domain ABK1_RS12400 PF00175 Oxidoreductase NAD-binding domain ABK1_RS12400 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS12415 PF00355 Rieske [2Fe-2S] domain ABK1_RS12415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABK1_RS12430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS12435 PF01425 Amidase ABK1_RS12445 PF07690 Major Facilitator Superfamily ABK1_RS12455 PF00106 short chain dehydrogenase ABK1_RS12470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS12470 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS12470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS12475 PF03466 LysR substrate binding domain ABK1_RS12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS12480 PF09339 IclR helix-turn-helix domain ABK1_RS12480 PF01614 Bacterial transcriptional regulator ABK1_RS12485 PF00753 Metallo-beta-lactamase superfamily ABK1_RS12495 PF04143 Sulphur transport ABK1_RS12505 PF01011 PQQ enzyme repeat ABK1_RS12505 PF13360 PQQ-like domain ABK1_RS12510 PF04966 Carbohydrate-selective porin, OprB family ABK1_RS12515 PF05048 Periplasmic copper-binding protein (NosD) ABK1_RS12520 PF01487 Type I 3-dehydroquinase ABK1_RS12525 PF00775 Dioxygenase ABK1_RS12530 PF00775 Dioxygenase ABK1_RS12530 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABK1_RS12535 PF02627 Carboxymuconolactone decarboxylase family ABK1_RS12540 PF07690 Major Facilitator Superfamily ABK1_RS12545 PF00561 alpha/beta hydrolase fold ABK1_RS12550 PF00206 Lyase ABK1_RS12550 PF10397 Adenylosuccinate lyase C-terminus ABK1_RS12555 PF02803 Thiolase, C-terminal domain ABK1_RS12555 PF00108 Thiolase, N-terminal domain ABK1_RS12560 PF01144 Coenzyme A transferase ABK1_RS12565 PF01144 Coenzyme A transferase ABK1_RS12570 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABK1_RS12575 PF04977 Septum formation initiator ABK1_RS12580 PF04239 Protein of unknown function (DUF421) ABK1_RS12585 PF00113 Enolase, C-terminal TIM barrel domain ABK1_RS12585 PF03952 Enolase, N-terminal domain ABK1_RS12590 PF00793 DAHP synthetase I family ABK1_RS12595 PF06418 CTP synthase N-terminus ABK1_RS12595 PF00117 Glutamine amidotransferase class-I ABK1_RS12625 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS12625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABK1_RS12640 PF00793 DAHP synthetase I family ABK1_RS12645 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABK1_RS12650 PF00004 ATPase family associated with various cellular activities (AAA) ABK1_RS12650 PF07724 AAA domain (Cdc48 subfamily) ABK1_RS12650 PF17871 AAA lid domain ABK1_RS12650 PF02861 Clp amino terminal domain, pathogenicity island component ABK1_RS12650 PF10431 C-terminal, D2-small domain, of ClpB protein ABK1_RS12655 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABK1_RS12665 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABK1_RS12665 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABK1_RS12680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABK1_RS12685 PF00585 C-terminal regulatory domain of Threonine dehydratase ABK1_RS12685 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS12690 PF02080 TrkA-C domain ABK1_RS12690 PF02254 TrkA-N domain ABK1_RS12695 PF02386 Cation transport protein ABK1_RS12700 PF02253 Phospholipase A1 ABK1_RS12705 PF08367 Peptidase M16C associated ABK1_RS12705 PF00675 Insulinase (Peptidase family M16) ABK1_RS12705 PF05193 Peptidase M16 inactive domain ABK1_RS12715 PF00294 pfkB family carbohydrate kinase ABK1_RS12725 PF07290 Protein of unknown function (DUF1449) ABK1_RS12730 PF13737 Transposase DDE domain ABK1_RS12740 PF01654 Cytochrome bd terminal oxidase subunit I ABK1_RS12745 PF02322 Cytochrome bd terminal oxidase subunit II ABK1_RS12750 PF08173 Membrane bound YbgT-like protein ABK1_RS12765 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABK1_RS12775 PF02881 SRP54-type protein, helical bundle domain ABK1_RS12775 PF00448 SRP54-type protein, GTPase domain ABK1_RS12800 PF00571 CBS domain ABK1_RS12800 PF00478 IMP dehydrogenase / GMP reductase domain ABK1_RS12805 PF00202 Aminotransferase class-III ABK1_RS12810 PF00462 Glutaredoxin ABK1_RS12820 PF03466 LysR substrate binding domain ABK1_RS12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS12825 PF00557 Metallopeptidase family M24 ABK1_RS12830 PF05525 Branched-chain amino acid transport protein ABK1_RS12855 PF00391 PEP-utilising enzyme, mobile domain ABK1_RS12855 PF02896 PEP-utilising enzyme, TIM barrel domain ABK1_RS12855 PF00381 PTS HPr component phosphorylation site ABK1_RS12855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABK1_RS12855 PF05524 PEP-utilising enzyme, N-terminal ABK1_RS12860 PF00294 pfkB family carbohydrate kinase ABK1_RS12865 PF02378 Phosphotransferase system, EIIC ABK1_RS12865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABK1_RS12890 PF00563 EAL domain ABK1_RS12890 PF03707 Bacterial signalling protein N terminal repeat ABK1_RS12890 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS12900 PF07995 Glucose / Sorbosone dehydrogenase ABK1_RS12905 PF02586 SOS response associated peptidase (SRAP) ABK1_RS12910 PF01740 STAS domain ABK1_RS12910 PF00916 Sulfate permease family ABK1_RS12915 PF00082 Subtilase family ABK1_RS12915 PF05922 Peptidase inhibitor I9 ABK1_RS12925 PF00324 Amino acid permease ABK1_RS12930 PF00266 Aminotransferase class-V ABK1_RS12935 PF01037 Lrp/AsnC ligand binding domain ABK1_RS12960 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS12965 PF01479 S4 domain ABK1_RS12970 PF00154 recA bacterial DNA recombination protein ABK1_RS12975 PF02631 RecX family ABK1_RS12985 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABK1_RS12985 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS12990 PF07977 FabA-like domain ABK1_RS12995 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABK1_RS12995 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS13005 PF07244 Surface antigen variable number repeat ABK1_RS13005 PF01103 Surface antigen ABK1_RS13010 PF02163 Peptidase family M50 ABK1_RS13010 PF17820 PDZ domain ABK1_RS13010 PF13180 PDZ domain ABK1_RS13015 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABK1_RS13015 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABK1_RS13015 PF13288 DXP reductoisomerase C-terminal domain ABK1_RS13025 PF01255 Putative undecaprenyl diphosphate synthase ABK1_RS13030 PF01765 Ribosome recycling factor ABK1_RS13035 PF00696 Amino acid kinase family ABK1_RS13040 PF18693 TRAM domain ABK1_RS13040 PF00919 Uncharacterized protein family UPF0004 ABK1_RS13040 PF04055 Radical SAM superfamily ABK1_RS13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS13045 PF00989 PAS fold ABK1_RS13045 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS13050 PF02954 Bacterial regulatory protein, Fis family ABK1_RS13050 PF00072 Response regulator receiver domain ABK1_RS13050 PF00158 Sigma-54 interaction domain ABK1_RS13055 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS13065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABK1_RS13065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABK1_RS13075 PF02542 YgbB family ABK1_RS13085 PF01266 FAD dependent oxidoreductase ABK1_RS13105 PF10415 Fumarase C C-terminus ABK1_RS13105 PF00206 Lyase ABK1_RS13110 PF16363 GDP-mannose 4,6 dehydratase ABK1_RS13115 PF02635 DsrE/DsrF-like family ABK1_RS13135 PF00892 EamA-like transporter family ABK1_RS13140 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS13140 PF00155 Aminotransferase class I and II ABK1_RS13145 PF01638 HxlR-like helix-turn-helix ABK1_RS13150 PF03453 MoeA N-terminal region (domain I and II) ABK1_RS13150 PF03454 MoeA C-terminal region (domain IV) ABK1_RS13150 PF00994 Probable molybdopterin binding domain ABK1_RS13155 PF01967 MoaC family ABK1_RS13155 PF00994 Probable molybdopterin binding domain ABK1_RS13160 PF02391 MoaE protein ABK1_RS13170 PF06463 Molybdenum Cofactor Synthesis C ABK1_RS13170 PF04055 Radical SAM superfamily ABK1_RS13175 PF01568 Molydopterin dinucleotide binding domain ABK1_RS13175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABK1_RS13175 PF00384 Molybdopterin oxidoreductase ABK1_RS13180 PF12804 MobA-like NTP transferase domain ABK1_RS13185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABK1_RS13185 PF04324 BFD-like [2Fe-2S] binding domain ABK1_RS13185 PF01568 Molydopterin dinucleotide binding domain ABK1_RS13185 PF00384 Molybdopterin oxidoreductase ABK1_RS13190 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABK1_RS13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS13190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABK1_RS13190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABK1_RS13190 PF04324 BFD-like [2Fe-2S] binding domain ABK1_RS13195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABK1_RS13195 PF13806 Rieske-like [2Fe-2S] domain ABK1_RS13195 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS13195 PF04324 BFD-like [2Fe-2S] binding domain ABK1_RS13195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABK1_RS13195 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABK1_RS13205 PF00072 Response regulator receiver domain ABK1_RS13205 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS13210 PF00005 ABC transporter ABK1_RS13215 PF00817 impB/mucB/samB family ABK1_RS13215 PF13438 Domain of unknown function (DUF4113) ABK1_RS13215 PF11799 impB/mucB/samB family C-terminal domain ABK1_RS13220 PF01220 Dehydroquinase class II ABK1_RS13225 PF00364 Biotin-requiring enzyme ABK1_RS13230 PF02785 Biotin carboxylase C-terminal domain ABK1_RS13230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABK1_RS13230 PF00289 Biotin carboxylase, N-terminal domain ABK1_RS13240 PF12832 MFS_1 like family ABK1_RS13245 PF08019 Phosphoethanolamine transferase EptA/EptB ABK1_RS13245 PF00884 Sulfatase ABK1_RS13320 PF01464 Transglycosylase SLT domain ABK1_RS13320 PF01551 Peptidase family M23 ABK1_RS13320 PF10145 Phage-related minor tail protein ABK1_RS13335 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ABK1_RS13570 PF00117 Glutamine amidotransferase class-I ABK1_RS13575 PF11838 ERAP1-like C-terminal domain ABK1_RS13575 PF01433 Peptidase family M1 domain ABK1_RS13580 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS13580 PF00593 TonB dependent receptor ABK1_RS13585 PF00591 Glycosyl transferase family, a/b domain ABK1_RS13585 PF02885 Glycosyl transferase family, helical bundle domain ABK1_RS13590 PF00218 Indole-3-glycerol phosphate synthase ABK1_RS13605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABK1_RS13605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABK1_RS13610 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS13610 PF01799 [2Fe-2S] binding domain ABK1_RS13615 PF01227 GTP cyclohydrolase I ABK1_RS13630 PF00144 Beta-lactamase ABK1_RS13645 PF05675 Protein of unknown function (DUF817) ABK1_RS13650 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABK1_RS13660 PF00425 chorismate binding enzyme ABK1_RS13670 PF00975 Thioesterase domain ABK1_RS13675 PF00005 ABC transporter ABK1_RS13680 PF00005 ABC transporter ABK1_RS13695 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABK1_RS13700 PF00857 Isochorismatase family ABK1_RS13700 PF00550 Phosphopantetheine attachment site ABK1_RS13705 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS13705 PF00501 AMP-binding enzyme ABK1_RS13710 PF00501 AMP-binding enzyme ABK1_RS13710 PF00668 Condensation domain ABK1_RS13710 PF00550 Phosphopantetheine attachment site ABK1_RS13715 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABK1_RS13720 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS13720 PF00593 TonB dependent receptor ABK1_RS13725 PF01497 Periplasmic binding protein ABK1_RS13730 PF00005 ABC transporter ABK1_RS13735 PF01032 FecCD transport family ABK1_RS13740 PF01032 FecCD transport family ABK1_RS13745 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS13745 PF00501 AMP-binding enzyme ABK1_RS13745 PF00975 Thioesterase domain ABK1_RS13745 PF00668 Condensation domain ABK1_RS13745 PF00550 Phosphopantetheine attachment site ABK1_RS13750 PF00501 AMP-binding enzyme ABK1_RS13750 PF00668 Condensation domain ABK1_RS13750 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS13750 PF00550 Phosphopantetheine attachment site ABK1_RS13760 PF13309 HTH domain ABK1_RS13760 PF08348 YheO-like PAS domain ABK1_RS13770 PF17954 Quercetinase C-terminal cupin domain ABK1_RS13770 PF02678 Pirin ABK1_RS13785 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS13790 PF02801 Beta-ketoacyl synthase, C-terminal domain ABK1_RS13790 PF08659 KR domain ABK1_RS13790 PF00698 Acyl transferase domain ABK1_RS13790 PF14765 Polyketide synthase dehydratase ABK1_RS13790 PF09277 Erythronolide synthase, docking ABK1_RS13790 PF16197 Ketoacyl-synthetase C-terminal extension ABK1_RS13790 PF00550 Phosphopantetheine attachment site ABK1_RS13790 PF00109 Beta-ketoacyl synthase, N-terminal domain ABK1_RS13790 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS13790 PF08990 Erythronolide synthase docking ABK1_RS13795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABK1_RS13795 PF13378 Enolase C-terminal domain-like ABK1_RS13805 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ABK1_RS13815 PF00892 EamA-like transporter family ABK1_RS13835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABK1_RS13835 PF01266 FAD dependent oxidoreductase ABK1_RS13840 PF18113 Rubredoxin binding C-terminal domain ABK1_RS13840 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS13845 PF00171 Aldehyde dehydrogenase family ABK1_RS13870 PF02028 BCCT, betaine/carnitine/choline family transporter ABK1_RS13875 PF02028 BCCT, betaine/carnitine/choline family transporter ABK1_RS13885 PF00324 Amino acid permease ABK1_RS13890 PF00171 Aldehyde dehydrogenase family ABK1_RS13905 PF06018 CodY GAF-like domain ABK1_RS13905 PF13556 PucR C-terminal helix-turn-helix domain ABK1_RS13905 PF17853 GGDEF-like domain ABK1_RS13935 PF04328 Selenoprotein, putative ABK1_RS13940 PF02554 Carbon starvation protein CstA ABK1_RS13940 PF13722 5TM C-terminal transporter carbon starvation CstA ABK1_RS13945 PF01132 Elongation factor P (EF-P) OB domain ABK1_RS13945 PF08207 Elongation factor P (EF-P) KOW-like domain ABK1_RS13945 PF09285 Elongation factor P, C-terminal ABK1_RS13950 PF04055 Radical SAM superfamily ABK1_RS13965 PF01197 Ribosomal protein L31 ABK1_RS13970 PF13593 SBF-like CPA transporter family (DUF4137) ABK1_RS13975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABK1_RS13980 PF07690 Major Facilitator Superfamily ABK1_RS13985 PF05362 Lon protease (S16) C-terminal proteolytic domain ABK1_RS13985 PF13654 AAA domain ABK1_RS13990 PF03466 LysR substrate binding domain ABK1_RS13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS13995 PF01476 LysM domain ABK1_RS13995 PF01551 Peptidase family M23 ABK1_RS14000 PF01975 Survival protein SurE ABK1_RS14015 PF00768 D-alanyl-D-alanine carboxypeptidase ABK1_RS14015 PF07943 Penicillin-binding protein 5, C-terminal domain ABK1_RS14020 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS14025 PF13344 Haloacid dehalogenase-like hydrolase ABK1_RS14025 PF00293 NUDIX domain ABK1_RS14035 PF04356 Protein of unknown function (DUF489) ABK1_RS14040 PF00206 Lyase ABK1_RS14040 PF08328 Adenylosuccinate lyase C-terminal ABK1_RS14055 PF01343 Peptidase family S49 ABK1_RS14055 PF08496 Peptidase family S49 N-terminal ABK1_RS14060 PF00005 ABC transporter ABK1_RS14065 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS14070 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS14075 PF12849 PBP superfamily domain ABK1_RS14080 PF13737 Transposase DDE domain ABK1_RS14085 PF00324 Amino acid permease ABK1_RS14090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABK1_RS14090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABK1_RS14090 PF00205 Thiamine pyrophosphate enzyme, central domain ABK1_RS14095 PF01037 Lrp/AsnC ligand binding domain ABK1_RS14100 PF00171 Aldehyde dehydrogenase family ABK1_RS14105 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABK1_RS14110 PF00202 Aminotransferase class-III ABK1_RS14120 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS14120 PF17754 MftR C-terminal domain ABK1_RS14130 PF00487 Fatty acid desaturase ABK1_RS14135 PF00175 Oxidoreductase NAD-binding domain ABK1_RS14135 PF00111 2Fe-2S iron-sulfur cluster binding domain ABK1_RS14135 PF00970 Oxidoreductase FAD-binding domain ABK1_RS14140 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS14150 PF18337 RapA N-terminal Tudor like domain ABK1_RS14150 PF18339 RapA N-terminal Tudor like domain 1 ABK1_RS14150 PF00271 Helicase conserved C-terminal domain ABK1_RS14150 PF12137 RNA polymerase recycling family C-terminal ABK1_RS14150 PF00176 SNF2 family N-terminal domain ABK1_RS14155 PF00849 RNA pseudouridylate synthase ABK1_RS14165 PF00202 Aminotransferase class-III ABK1_RS14170 PF02581 Thiamine monophosphate synthase ABK1_RS14195 PF05193 Peptidase M16 inactive domain ABK1_RS14195 PF00675 Insulinase (Peptidase family M16) ABK1_RS14200 PF02567 Phenazine biosynthesis-like protein ABK1_RS14205 PF00375 Sodium:dicarboxylate symporter family ABK1_RS14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS14210 PF03466 LysR substrate binding domain ABK1_RS14215 PF06779 Uncharacterised MFS-type transporter YbfB ABK1_RS14230 PF00180 Isocitrate/isopropylmalate dehydrogenase ABK1_RS14235 PF00849 RNA pseudouridylate synthase ABK1_RS14240 PF03971 Monomeric isocitrate dehydrogenase ABK1_RS14250 PF00768 D-alanyl-D-alanine carboxypeptidase ABK1_RS14250 PF07943 Penicillin-binding protein 5, C-terminal domain ABK1_RS14255 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS14260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABK1_RS14265 PF03441 FAD binding domain of DNA photolyase ABK1_RS14265 PF00875 DNA photolyase ABK1_RS14295 PF02350 UDP-N-acetylglucosamine 2-epimerase ABK1_RS14310 PF03060 Nitronate monooxygenase ABK1_RS14315 PF01207 Dihydrouridine synthase (Dus) ABK1_RS14320 PF07759 Protein of unknown function (DUF1615) ABK1_RS14330 PF01472 PUA domain ABK1_RS14330 PF00696 Amino acid kinase family ABK1_RS14335 PF01018 GTP1/OBG ABK1_RS14335 PF01926 50S ribosome-binding GTPase ABK1_RS14350 PF13737 Transposase DDE domain ABK1_RS14360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABK1_RS14360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABK1_RS14365 PF00892 EamA-like transporter family ABK1_RS14375 PF04851 Type III restriction enzyme, res subunit ABK1_RS14375 PF17757 UvrB interaction domain ABK1_RS14375 PF00271 Helicase conserved C-terminal domain ABK1_RS14375 PF12344 Ultra-violet resistance protein B ABK1_RS14375 PF02151 UvrB/uvrC motif ABK1_RS14385 PF17151 Periplasmic sensor domain ABK1_RS14385 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS14395 PF00155 Aminotransferase class I and II ABK1_RS14420 PF00106 short chain dehydrogenase ABK1_RS14425 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABK1_RS14430 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABK1_RS14435 PF11967 Recombination protein O N terminal ABK1_RS14435 PF02565 Recombination protein O C terminal ABK1_RS14445 PF07650 KH domain ABK1_RS14445 PF01926 50S ribosome-binding GTPase ABK1_RS14450 PF00035 Double-stranded RNA binding motif ABK1_RS14450 PF14622 Ribonuclease-III-like ABK1_RS14460 PF10502 Signal peptidase, peptidase S26 ABK1_RS14465 PF03144 Elongation factor Tu domain 2 ABK1_RS14465 PF00009 Elongation factor Tu GTP binding domain ABK1_RS14465 PF00679 Elongation factor G C-terminus ABK1_RS14465 PF06421 GTP-binding protein LepA C-terminus ABK1_RS14475 PF13180 PDZ domain ABK1_RS14480 PF02910 Fumarate reductase flavoprotein C-term ABK1_RS14480 PF00890 FAD binding domain ABK1_RS14490 PF02223 Thymidylate kinase ABK1_RS14495 PF02618 YceG-like family ABK1_RS14500 PF01063 Amino-transferase class IV ABK1_RS14515 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS14520 PF00528 Binding-protein-dependent transport system inner membrane component ABK1_RS14525 PF12857 TOBE-like domain ABK1_RS14525 PF00005 ABC transporter ABK1_RS14530 PF03466 LysR substrate binding domain ABK1_RS14530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS14540 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS14540 PF14602 Hexapeptide repeat of succinyl-transferase ABK1_RS14540 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABK1_RS14550 PF06508 Queuosine biosynthesis protein QueC ABK1_RS14565 PF00578 AhpC/TSA family ABK1_RS14575 PF01467 Cytidylyltransferase-like ABK1_RS14575 PF00293 NUDIX domain ABK1_RS14580 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS14585 PF01784 NIF3 (NGG1p interacting factor 3) ABK1_RS14595 PF07690 Major Facilitator Superfamily ABK1_RS14600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABK1_RS14600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABK1_RS14600 PF02769 AIR synthase related protein, C-terminal domain ABK1_RS14605 PF01966 HD domain ABK1_RS14610 PF07499 RuvA, C-terminal domain ABK1_RS14610 PF01330 RuvA N terminal domain ABK1_RS14615 PF17864 RuvB AAA lid domain ABK1_RS14615 PF05491 RuvB C-terminal winged helix domain ABK1_RS14615 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABK1_RS14620 PF01546 Peptidase family M20/M25/M40 ABK1_RS14620 PF07687 Peptidase dimerisation domain ABK1_RS14625 PF03061 Thioesterase superfamily ABK1_RS14630 PF01618 MotA/TolQ/ExbB proton channel family ABK1_RS14635 PF02472 Biopolymer transport protein ExbD/TolR ABK1_RS14645 PF07676 WD40-like Beta Propeller Repeat ABK1_RS14645 PF04052 TolB amino-terminal domain ABK1_RS14650 PF00691 OmpA family ABK1_RS14660 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABK1_RS14665 PF00588 SpoU rRNA Methylase family ABK1_RS14665 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABK1_RS14705 PF00308 Bacterial dnaA protein ABK1_RS14705 PF08299 Bacterial dnaA protein helix-turn-helix ABK1_RS14705 PF11638 DnaA N-terminal domain ABK1_RS14710 PF01594 AI-2E family transporter ABK1_RS14715 PF00586 AIR synthase related protein, N-terminal domain ABK1_RS14715 PF02769 AIR synthase related protein, C-terminal domain ABK1_RS14720 PF00551 Formyl transferase ABK1_RS14725 PF12697 Alpha/beta hydrolase family ABK1_RS14730 PF01343 Peptidase family S49 ABK1_RS14730 PF06965 Na+/H+ antiporter 1 ABK1_RS14740 PF00753 Metallo-beta-lactamase superfamily ABK1_RS14740 PF03772 Competence protein ABK1_RS14740 PF13567 Domain of unknown function (DUF4131) ABK1_RS14745 PF00005 ABC transporter ABK1_RS14750 PF12704 MacB-like periplasmic core domain ABK1_RS14750 PF02687 FtsX-like permease family ABK1_RS14760 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABK1_RS14770 PF00266 Aminotransferase class-V ABK1_RS14780 PF13533 Biotin-lipoyl like ABK1_RS14800 PF00535 Glycosyl transferase family 2 ABK1_RS14815 PF03989 DNA gyrase C-terminal domain, beta-propeller ABK1_RS14815 PF00521 DNA gyrase/topoisomerase IV, subunit A ABK1_RS14820 PF00766 Electron transfer flavoprotein FAD-binding domain ABK1_RS14820 PF01012 Electron transfer flavoprotein domain ABK1_RS14825 PF01012 Electron transfer flavoprotein domain ABK1_RS14830 PF02899 Phage integrase, N-terminal SAM-like domain ABK1_RS14830 PF00589 Phage integrase family ABK1_RS14835 PF01810 LysE type translocator ABK1_RS14840 PF01678 Diaminopimelate epimerase ABK1_RS14845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABK1_RS14845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABK1_RS14855 PF00324 Amino acid permease ABK1_RS14860 PF18073 Rubredoxin metal binding domain ABK1_RS14870 PF00152 tRNA synthetases class II (D, K and N) ABK1_RS14875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABK1_RS14875 PF11890 Domain of unknown function (DUF3410) ABK1_RS14875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABK1_RS14880 PF06803 Protein of unknown function (DUF1232) ABK1_RS14885 PF02634 FdhD/NarQ family ABK1_RS14890 PF00384 Molybdopterin oxidoreductase ABK1_RS14910 PF00881 Nitroreductase family ABK1_RS14935 PF00975 Thioesterase domain ABK1_RS14935 PF00550 Phosphopantetheine attachment site ABK1_RS14935 PF00668 Condensation domain ABK1_RS14935 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS14935 PF00501 AMP-binding enzyme ABK1_RS14950 PF01272 Transcription elongation factor, GreA/GreB, C-term ABK1_RS14950 PF03449 Transcription elongation factor, N-terminal ABK1_RS14955 PF01464 Transglycosylase SLT domain ABK1_RS14955 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABK1_RS14965 PF01171 PP-loop family ABK1_RS14970 PF01464 Transglycosylase SLT domain ABK1_RS14975 PF01435 Peptidase family M48 ABK1_RS14985 PF00873 AcrB/AcrD/AcrF family ABK1_RS14990 PF03009 Glycerophosphoryl diester phosphodiesterase family ABK1_RS14995 PF00753 Metallo-beta-lactamase superfamily ABK1_RS15000 PF01219 Prokaryotic diacylglycerol kinase ABK1_RS15005 PF00118 TCP-1/cpn60 chaperonin family ABK1_RS15010 PF00166 Chaperonin 10 Kd subunit ABK1_RS15020 PF00149 Calcineurin-like phosphoesterase ABK1_RS15025 PF00781 Diacylglycerol kinase catalytic domain ABK1_RS15030 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABK1_RS15030 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABK1_RS15035 PF01266 FAD dependent oxidoreductase ABK1_RS15035 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABK1_RS15040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABK1_RS15040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABK1_RS15045 PF00083 Sugar (and other) transporter ABK1_RS15060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABK1_RS15060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABK1_RS15075 PF16655 PhoD-like phosphatase, N-terminal domain ABK1_RS15075 PF09423 PhoD-like phosphatase ABK1_RS15095 PF00809 Pterin binding enzyme ABK1_RS15100 PF01434 Peptidase family M41 ABK1_RS15100 PF06480 FtsH Extracellular ABK1_RS15100 PF17862 AAA+ lid domain ABK1_RS15100 PF00004 ATPase family associated with various cellular activities (AAA) ABK1_RS15105 PF01728 FtsJ-like methyltransferase ABK1_RS15110 PF01985 CRS1 / YhbY (CRM) domain ABK1_RS15125 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABK1_RS15125 PF00117 Glutamine amidotransferase class-I ABK1_RS15130 PF02142 MGS-like domain ABK1_RS15130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABK1_RS15130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABK1_RS15135 PF03449 Transcription elongation factor, N-terminal ABK1_RS15135 PF01272 Transcription elongation factor, GreA/GreB, C-term ABK1_RS15140 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS15145 PF00582 Universal stress protein family ABK1_RS15150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABK1_RS15160 PF09587 Bacterial capsule synthesis protein PGA_cap ABK1_RS15215 PF00999 Sodium/hydrogen exchanger family ABK1_RS15220 PF04228 Putative neutral zinc metallopeptidase ABK1_RS15225 PF05661 Protein of unknown function (DUF808) ABK1_RS15230 PF00579 tRNA synthetases class I (W and Y) ABK1_RS15235 PF00549 CoA-ligase ABK1_RS15235 PF02629 CoA binding domain ABK1_RS15240 PF00549 CoA-ligase ABK1_RS15240 PF08442 ATP-grasp domain ABK1_RS15245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABK1_RS15245 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS15250 PF00364 Biotin-requiring enzyme ABK1_RS15250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABK1_RS15250 PF02817 e3 binding domain ABK1_RS15255 PF02779 Transketolase, pyrimidine binding domain ABK1_RS15255 PF16870 2-oxoglutarate dehydrogenase C-terminal ABK1_RS15255 PF00676 Dehydrogenase E1 component ABK1_RS15255 PF16078 2-oxoglutarate dehydrogenase N-terminus ABK1_RS15260 PF13085 2Fe-2S iron-sulfur cluster binding domain ABK1_RS15265 PF02910 Fumarate reductase flavoprotein C-term ABK1_RS15265 PF00890 FAD binding domain ABK1_RS15270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABK1_RS15275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABK1_RS15280 PF00285 Citrate synthase, C-terminal domain ABK1_RS15290 PF00581 Rhodanese-like domain ABK1_RS15290 PF17773 UPF0176 acylphosphatase like domain ABK1_RS15310 PF04545 Sigma-70, region 4 ABK1_RS15310 PF04546 Sigma-70, non-essential region ABK1_RS15310 PF04539 Sigma-70 region 3 ABK1_RS15310 PF04542 Sigma-70 region 2 ABK1_RS15310 PF00140 Sigma-70 factor, region 1.2 ABK1_RS15310 PF03979 Sigma-70 factor, region 1.1 ABK1_RS15315 PF04359 Protein of unknown function (DUF493) ABK1_RS15320 PF03099 Biotin/lipoate A/B protein ligase family ABK1_RS15330 PF00465 Iron-containing alcohol dehydrogenase ABK1_RS15335 PF13520 Amino acid permease ABK1_RS15340 PF03358 NADPH-dependent FMN reductase ABK1_RS15345 PF01638 HxlR-like helix-turn-helix ABK1_RS15350 PF00588 SpoU rRNA Methylase family ABK1_RS15355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABK1_RS15355 PF10414 Sirohaem synthase dimerisation region ABK1_RS15355 PF14824 Sirohaem biosynthesis protein central ABK1_RS15360 PF02403 Seryl-tRNA synthetase N-terminal domain ABK1_RS15360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABK1_RS15370 PF03548 Outer membrane lipoprotein carrier protein LolA ABK1_RS15375 PF01016 Ribosomal L27 protein ABK1_RS15380 PF00829 Ribosomal prokaryotic L21 protein ABK1_RS15390 PF00348 Polyprenyl synthetase ABK1_RS15400 PF01569 PAP2 superfamily ABK1_RS15405 PF00529 HlyD membrane-fusion protein of T1SS ABK1_RS15405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABK1_RS15410 PF00873 AcrB/AcrD/AcrF family ABK1_RS15415 PF02321 Outer membrane efflux protein ABK1_RS15420 PF01906 Putative heavy-metal-binding ABK1_RS15425 PF01906 Putative heavy-metal-binding ABK1_RS15445 PF08264 Anticodon-binding domain of tRNA ABK1_RS15445 PF00133 tRNA synthetases class I (I, L, M and V) ABK1_RS15445 PF10458 Valyl tRNA synthetase tRNA binding arm ABK1_RS15465 PF03466 LysR substrate binding domain ABK1_RS15465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS15470 PF00909 Ammonium Transporter Family ABK1_RS15480 PF08521 Two-component sensor kinase N-terminal ABK1_RS15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS15480 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS15485 PF00072 Response regulator receiver domain ABK1_RS15485 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS15490 PF08019 Phosphoethanolamine transferase EptA/EptB ABK1_RS15490 PF00884 Sulfatase ABK1_RS15510 PF01734 Patatin-like phospholipase ABK1_RS15520 PF01145 SPFH domain / Band 7 family ABK1_RS15525 PF04237 YjbR ABK1_RS15530 PF00348 Polyprenyl synthetase ABK1_RS15535 PF04303 PrpF protein ABK1_RS15540 PF00324 Amino acid permease ABK1_RS15550 PF01965 DJ-1/PfpI family ABK1_RS15555 PF14765 Polyketide synthase dehydratase ABK1_RS15555 PF00550 Phosphopantetheine attachment site ABK1_RS15555 PF02801 Beta-ketoacyl synthase, C-terminal domain ABK1_RS15555 PF00109 Beta-ketoacyl synthase, N-terminal domain ABK1_RS15555 PF16197 Ketoacyl-synthetase C-terminal extension ABK1_RS15555 PF09277 Erythronolide synthase, docking ABK1_RS15555 PF08990 Erythronolide synthase docking ABK1_RS15555 PF00698 Acyl transferase domain ABK1_RS15555 PF08659 KR domain ABK1_RS15555 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS15560 PF06719 AraC-type transcriptional regulator N-terminus ABK1_RS15560 PF12833 Helix-turn-helix domain ABK1_RS15565 PF02673 Bacitracin resistance protein BacA ABK1_RS15585 PF02525 Flavodoxin-like fold ABK1_RS15600 PF01507 Phosphoadenosine phosphosulfate reductase family ABK1_RS15605 PF06974 Protein of unknown function (DUF1298) ABK1_RS15605 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABK1_RS15615 PF00575 S1 RNA binding domain ABK1_RS15615 PF10150 Ribonuclease E/G family ABK1_RS15620 PF02545 Maf-like protein ABK1_RS15625 PF04093 rod shape-determining protein MreD ABK1_RS15630 PF04085 rod shape-determining protein MreC ABK1_RS15640 PF02686 Glu-tRNAGln amidotransferase C subunit ABK1_RS15645 PF01425 Amidase ABK1_RS15650 PF02637 GatB domain ABK1_RS15650 PF02934 GatB/GatE catalytic domain ABK1_RS15680 PF05992 SbmA/BacA-like family ABK1_RS15685 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS15685 PF13291 ACT domain ABK1_RS15690 PF01734 Patatin-like phospholipase ABK1_RS15695 PF01235 Sodium:alanine symporter family ABK1_RS15705 PF00881 Nitroreductase family ABK1_RS15710 PF07690 Major Facilitator Superfamily ABK1_RS15715 PF12805 FUSC-like inner membrane protein yccS ABK1_RS15725 PF00175 Oxidoreductase NAD-binding domain ABK1_RS15725 PF00258 Flavodoxin ABK1_RS15725 PF00667 FAD binding domain ABK1_RS15755 PF03734 L,D-transpeptidase catalytic domain ABK1_RS15755 PF17969 L,D-transpeptidase C-terminal domain ABK1_RS15760 PF04304 Protein of unknown function (DUF454) ABK1_RS15770 PF08085 Entericidin EcnA/B family ABK1_RS15775 PF07687 Peptidase dimerisation domain ABK1_RS15775 PF01546 Peptidase family M20/M25/M40 ABK1_RS15785 PF01627 Hpt domain ABK1_RS15785 PF01584 CheW-like domain ABK1_RS15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS15785 PF00072 Response regulator receiver domain ABK1_RS15790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABK1_RS15790 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABK1_RS15795 PF01584 CheW-like domain ABK1_RS15800 PF00072 Response regulator receiver domain ABK1_RS15805 PF00072 Response regulator receiver domain ABK1_RS15820 PF00873 AcrB/AcrD/AcrF family ABK1_RS15825 PF04073 Aminoacyl-tRNA editing domain ABK1_RS15825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABK1_RS15825 PF03129 Anticodon binding domain ABK1_RS15830 PF07411 Domain of unknown function (DUF1508) ABK1_RS15835 PF03831 PhnA domain ABK1_RS15835 PF08274 PhnA Zinc-Ribbon ABK1_RS15840 PF04343 Protein of unknown function, DUF488 ABK1_RS15850 PF01571 Aminomethyltransferase folate-binding domain ABK1_RS15855 PF13098 Thioredoxin-like domain ABK1_RS15855 PF10411 Disulfide bond isomerase protein N-terminus ABK1_RS15870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABK1_RS15875 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS15875 PF00593 TonB dependent receptor ABK1_RS15880 PF02245 Methylpurine-DNA glycosylase (MPG) ABK1_RS15885 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABK1_RS15885 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABK1_RS15885 PF06827 Zinc finger found in FPG and IleRS ABK1_RS15900 PF01741 Large-conductance mechanosensitive channel, MscL ABK1_RS15905 PF03144 Elongation factor Tu domain 2 ABK1_RS15905 PF00009 Elongation factor Tu GTP binding domain ABK1_RS15905 PF00679 Elongation factor G C-terminus ABK1_RS15910 PF00860 Permease family ABK1_RS15915 PF08468 Methyltransferase small domain N-terminal ABK1_RS15915 PF05175 Methyltransferase small domain ABK1_RS15920 PF00324 Amino acid permease ABK1_RS15925 PF01139 tRNA-splicing ligase RtcB ABK1_RS15935 PF00691 OmpA family ABK1_RS15935 PF13505 Outer membrane protein beta-barrel domain ABK1_RS15945 PF00108 Thiolase, N-terminal domain ABK1_RS15945 PF02803 Thiolase, C-terminal domain ABK1_RS15955 PF00893 Small Multidrug Resistance protein ABK1_RS15965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABK1_RS15965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABK1_RS15970 PF01011 PQQ enzyme repeat ABK1_RS15975 PF04966 Carbohydrate-selective porin, OprB family ABK1_RS15980 PF02515 CoA-transferase family III ABK1_RS15985 PF12833 Helix-turn-helix domain ABK1_RS15985 PF02311 AraC-like ligand binding domain ABK1_RS15990 PF00108 Thiolase, N-terminal domain ABK1_RS15990 PF02803 Thiolase, C-terminal domain ABK1_RS15995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABK1_RS15995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABK1_RS15995 PF00378 Enoyl-CoA hydratase/isomerase ABK1_RS16020 PF03006 Haemolysin-III related ABK1_RS16025 PF00083 Sugar (and other) transporter ABK1_RS16025 PF07690 Major Facilitator Superfamily ABK1_RS16035 PF07516 SecA Wing and Scaffold domain ABK1_RS16035 PF01043 SecA preprotein cross-linking domain ABK1_RS16035 PF07517 SecA DEAD-like domain ABK1_RS16035 PF02810 SEC-C motif ABK1_RS16040 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABK1_RS16040 PF00578 AhpC/TSA family ABK1_RS16045 PF00753 Metallo-beta-lactamase superfamily ABK1_RS16060 PF08245 Mur ligase middle domain ABK1_RS16060 PF02875 Mur ligase family, glutamate ligase domain ABK1_RS16065 PF01039 Carboxyl transferase domain ABK1_RS16070 PF00290 Tryptophan synthase alpha chain ABK1_RS16095 PF00291 Pyridoxal-phosphate dependent enzyme ABK1_RS16105 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS16105 PF00593 TonB dependent receptor ABK1_RS16110 PF01923 Cobalamin adenosyltransferase ABK1_RS16130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABK1_RS16135 PF00072 Response regulator receiver domain ABK1_RS16135 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS16140 PF00672 HAMP domain ABK1_RS16140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS16140 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS16150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS16150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS16150 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS16150 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABK1_RS16155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS16155 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABK1_RS16155 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS16155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS16160 PF03466 LysR substrate binding domain ABK1_RS16165 PF02798 Glutathione S-transferase, N-terminal domain ABK1_RS16165 PF00043 Glutathione S-transferase, C-terminal domain ABK1_RS16170 PF06146 Phosphate-starvation-inducible E ABK1_RS16190 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS16190 PF00593 TonB dependent receptor ABK1_RS16200 PF02938 GAD domain ABK1_RS16200 PF00152 tRNA synthetases class II (D, K and N) ABK1_RS16200 PF01336 OB-fold nucleic acid binding domain ABK1_RS16205 PF11380 Stealth protein CR2, conserved region 2 ABK1_RS16205 PF17102 Stealth protein CR3, conserved region 3 ABK1_RS16205 PF17101 Stealth protein CR1, conserved region 1 ABK1_RS16230 PF00534 Glycosyl transferases group 1 ABK1_RS16230 PF13439 Glycosyltransferase Family 4 ABK1_RS16235 PF00535 Glycosyl transferase family 2 ABK1_RS16240 PF01522 Polysaccharide deacetylase ABK1_RS16255 PF01063 Amino-transferase class IV ABK1_RS16260 PF08335 GlnD PII-uridylyltransferase ABK1_RS16260 PF03710 Glutamate-ammonia ligase adenylyltransferase ABK1_RS16265 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS16265 PF07689 KaiB domain ABK1_RS16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS16290 PF02547 Queuosine biosynthesis protein ABK1_RS16305 PF01702 Queuine tRNA-ribosyltransferase ABK1_RS16310 PF02699 Preprotein translocase subunit ABK1_RS16315 PF07549 SecD/SecF GG Motif ABK1_RS16315 PF13721 SecD export protein N-terminal TM region ABK1_RS16315 PF02355 Protein export membrane protein ABK1_RS16320 PF07549 SecD/SecF GG Motif ABK1_RS16320 PF02355 Protein export membrane protein ABK1_RS16325 PF02441 Flavoprotein ABK1_RS16325 PF04127 DNA / pantothenate metabolism flavoprotein ABK1_RS16330 PF04002 RadC-like JAB domain ABK1_RS16335 PF01062 Bestrophin, RFP-TM, chloride channel ABK1_RS16340 PF02811 PHP domain ABK1_RS16345 PF04279 Intracellular septation protein A ABK1_RS16350 PF03795 YCII-related domain ABK1_RS16360 PF01266 FAD dependent oxidoreductase ABK1_RS16360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABK1_RS16370 PF04461 Protein of unknown function (DUF520) ABK1_RS16380 PF03061 Thioesterase superfamily ABK1_RS16385 PF00085 Thioredoxin ABK1_RS16390 PF00561 alpha/beta hydrolase fold ABK1_RS16395 PF00753 Metallo-beta-lactamase superfamily ABK1_RS16395 PF04273 Putative phosphatase (DUF442) ABK1_RS16405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABK1_RS16405 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS16440 PF17152 Periplasmic sensor domain ABK1_RS16440 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS16445 PF01389 OmpA-like transmembrane domain ABK1_RS16445 PF00691 OmpA family ABK1_RS16450 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABK1_RS16450 PF00149 Calcineurin-like phosphoesterase ABK1_RS16455 PF13091 PLD-like domain ABK1_RS16465 PF13167 GTP-binding GTPase N-terminal ABK1_RS16465 PF01926 50S ribosome-binding GTPase ABK1_RS16465 PF16360 GTP-binding GTPase Middle Region ABK1_RS16485 PF00149 Calcineurin-like phosphoesterase ABK1_RS16490 PF00398 Ribosomal RNA adenine dimethylase ABK1_RS16495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABK1_RS16500 PF00572 Ribosomal protein L13 ABK1_RS16505 PF00380 Ribosomal protein S9/S16 ABK1_RS16510 PF00043 Glutathione S-transferase, C-terminal domain ABK1_RS16510 PF13417 Glutathione S-transferase, N-terminal domain ABK1_RS16515 PF04386 Stringent starvation protein B ABK1_RS16525 PF02785 Biotin carboxylase C-terminal domain ABK1_RS16525 PF00289 Biotin carboxylase, N-terminal domain ABK1_RS16525 PF00364 Biotin-requiring enzyme ABK1_RS16525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABK1_RS16535 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS16535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS16535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS16540 PF01039 Carboxyl transferase domain ABK1_RS16555 PF17932 Tetracyclin repressor-like, C-terminal domain ABK1_RS16555 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS16560 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS16560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS16560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS16605 PF01066 CDP-alcohol phosphatidyltransferase ABK1_RS16610 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABK1_RS16630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABK1_RS16630 PF00056 lactate/malate dehydrogenase, NAD binding domain ABK1_RS16640 PF10145 Phage-related minor tail protein ABK1_RS16640 PF01551 Peptidase family M23 ABK1_RS16640 PF01464 Transglycosylase SLT domain ABK1_RS16645 PF04055 Radical SAM superfamily ABK1_RS16645 PF00919 Uncharacterized protein family UPF0004 ABK1_RS16645 PF01938 TRAM domain ABK1_RS16650 PF02562 PhoH-like protein ABK1_RS16655 PF02130 Uncharacterized protein family UPF0054 ABK1_RS16680 PF03358 NADPH-dependent FMN reductase ABK1_RS16685 PF03631 Virulence factor BrkB ABK1_RS16690 PF00892 EamA-like transporter family ABK1_RS16695 PF12833 Helix-turn-helix domain ABK1_RS16700 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABK1_RS16745 PF17876 Cold shock domain ABK1_RS16745 PF00575 S1 RNA binding domain ABK1_RS16745 PF08206 Ribonuclease B OB domain ABK1_RS16745 PF00773 RNB domain ABK1_RS16745 PF08461 Ribonuclease R winged-helix domain ABK1_RS16750 PF01432 Peptidase family M3 ABK1_RS16755 PF09526 Probable metal-binding protein (DUF2387) ABK1_RS16785 PF03937 Flavinator of succinate dehydrogenase ABK1_RS16790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS16790 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS16790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS16795 PF00743 Flavin-binding monooxygenase-like ABK1_RS16800 PF01196 Ribosomal protein L17 ABK1_RS16805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABK1_RS16805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABK1_RS16805 PF01000 RNA polymerase Rpb3/RpoA insert domain ABK1_RS16810 PF00163 Ribosomal protein S4/S9 N-terminal domain ABK1_RS16810 PF01479 S4 domain ABK1_RS16815 PF00411 Ribosomal protein S11 ABK1_RS16820 PF00416 Ribosomal protein S13/S18 ABK1_RS16825 PF00444 Ribosomal protein L36 ABK1_RS16830 PF00344 SecY translocase ABK1_RS16835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABK1_RS16840 PF00327 Ribosomal protein L30p/L7e ABK1_RS16845 PF03719 Ribosomal protein S5, C-terminal domain ABK1_RS16845 PF00333 Ribosomal protein S5, N-terminal domain ABK1_RS16850 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABK1_RS16855 PF00347 Ribosomal protein L6 ABK1_RS16860 PF00410 Ribosomal protein S8 ABK1_RS16865 PF00253 Ribosomal protein S14p/S29e ABK1_RS16870 PF00281 Ribosomal protein L5 ABK1_RS16870 PF00673 ribosomal L5P family C-terminus ABK1_RS16875 PF00467 KOW motif ABK1_RS16875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABK1_RS16880 PF00238 Ribosomal protein L14p/L23e ABK1_RS16885 PF00366 Ribosomal protein S17 ABK1_RS16890 PF00831 Ribosomal L29 protein ABK1_RS16895 PF00252 Ribosomal protein L16p/L10e ABK1_RS16900 PF07650 KH domain ABK1_RS16900 PF00189 Ribosomal protein S3, C-terminal domain ABK1_RS16905 PF00237 Ribosomal protein L22p/L17e ABK1_RS16910 PF00203 Ribosomal protein S19 ABK1_RS16915 PF03947 Ribosomal Proteins L2, C-terminal domain ABK1_RS16915 PF00181 Ribosomal Proteins L2, RNA binding domain ABK1_RS16920 PF00276 Ribosomal protein L23 ABK1_RS16925 PF00573 Ribosomal protein L4/L1 family ABK1_RS16930 PF00297 Ribosomal protein L3 ABK1_RS16935 PF00338 Ribosomal protein S10p/S20e ABK1_RS16940 PF00117 Glutamine amidotransferase class-I ABK1_RS16945 PF01053 Cys/Met metabolism PLP-dependent enzyme ABK1_RS16950 PF05872 Bacterial protein of unknown function (DUF853) ABK1_RS16955 PF00175 Oxidoreductase NAD-binding domain ABK1_RS16955 PF00042 Globin ABK1_RS16955 PF00970 Oxidoreductase FAD-binding domain ABK1_RS16960 PF02082 Transcriptional regulator ABK1_RS16965 PF01926 50S ribosome-binding GTPase ABK1_RS16975 PF00375 Sodium:dicarboxylate symporter family ABK1_RS16985 PF01553 Acyltransferase ABK1_RS17000 PF00271 Helicase conserved C-terminal domain ABK1_RS17000 PF00270 DEAD/DEAH box helicase ABK1_RS17000 PF17191 RecG wedge domain ABK1_RS17005 PF00156 Phosphoribosyl transferase domain ABK1_RS17010 PF00293 NUDIX domain ABK1_RS17015 PF03641 Possible lysine decarboxylase ABK1_RS17020 PF01544 CorA-like Mg2+ transporter protein ABK1_RS17030 PF05494 MlaC protein ABK1_RS17040 PF02405 Permease MlaE ABK1_RS17045 PF00005 ABC transporter ABK1_RS17055 PF00270 DEAD/DEAH box helicase ABK1_RS17055 PF12343 Cold shock protein DEAD box A ABK1_RS17055 PF00271 Helicase conserved C-terminal domain ABK1_RS17055 PF03880 DbpA RNA binding domain ABK1_RS17060 PF00459 Inositol monophosphatase family ABK1_RS17065 PF02779 Transketolase, pyrimidine binding domain ABK1_RS17065 PF02780 Transketolase, C-terminal domain ABK1_RS17065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABK1_RS17070 PF00925 GTP cyclohydrolase II ABK1_RS17075 PF01218 Coproporphyrinogen III oxidase ABK1_RS17080 PF08501 Shikimate dehydrogenase substrate binding domain ABK1_RS17080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABK1_RS17080 PF01488 Shikimate / quinate 5-dehydrogenase ABK1_RS17090 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABK1_RS17090 PF02770 Acyl-CoA dehydrogenase, middle domain ABK1_RS17090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABK1_RS17090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABK1_RS17100 PF04024 PspC domain ABK1_RS17105 PF00571 CBS domain ABK1_RS17130 PF02091 Glycyl-tRNA synthetase alpha subunit ABK1_RS17135 PF02092 Glycyl-tRNA synthetase beta subunit ABK1_RS17135 PF05746 DALR anticodon binding domain ABK1_RS17145 PF00892 EamA-like transporter family ABK1_RS17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS17150 PF03466 LysR substrate binding domain ABK1_RS17165 PF00082 Subtilase family ABK1_RS17165 PF05922 Peptidase inhibitor I9 ABK1_RS17180 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABK1_RS17185 PF04996 Succinylarginine dihydrolase ABK1_RS17190 PF00171 Aldehyde dehydrogenase family ABK1_RS17195 PF04958 Arginine N-succinyltransferase beta subunit ABK1_RS17200 PF00202 Aminotransferase class-III ABK1_RS17205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABK1_RS17205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABK1_RS17210 PF00324 Amino acid permease ABK1_RS17240 PF13614 AAA domain ABK1_RS17245 PF01594 AI-2E family transporter ABK1_RS17250 PF00080 Copper/zinc superoxide dismutase (SODC) ABK1_RS17255 PF12805 FUSC-like inner membrane protein yccS ABK1_RS17260 PF07690 Major Facilitator Superfamily ABK1_RS17270 PF02525 Flavodoxin-like fold ABK1_RS17275 PF03992 Antibiotic biosynthesis monooxygenase ABK1_RS17285 PF01565 FAD binding domain ABK1_RS17285 PF02913 FAD linked oxidases, C-terminal domain ABK1_RS17290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABK1_RS17290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABK1_RS17295 PF00892 EamA-like transporter family ABK1_RS17300 PF00892 EamA-like transporter family ABK1_RS17310 PF01925 Sulfite exporter TauE/SafE ABK1_RS17315 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABK1_RS17315 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABK1_RS17315 PF09157 Pseudouridine synthase II TruB, C-terminal ABK1_RS17320 PF03280 Proteobacterial lipase chaperone protein ABK1_RS17325 PF00561 alpha/beta hydrolase fold ABK1_RS17330 PF01245 Ribosomal protein L19 ABK1_RS17335 PF01746 tRNA (Guanine-1)-methyltransferase ABK1_RS17340 PF01782 RimM N-terminal domain ABK1_RS17340 PF05239 PRC-barrel domain ABK1_RS17345 PF00886 Ribosomal protein S16 ABK1_RS17385 PF02401 LytB protein ABK1_RS17390 PF00625 Guanylate kinase ABK1_RS17395 PF01192 RNA polymerase Rpb6 ABK1_RS17400 PF04607 Region found in RelA / SpoT proteins ABK1_RS17400 PF02824 TGS domain ABK1_RS17400 PF13291 ACT domain ABK1_RS17405 PF01042 Endoribonuclease L-PSP ABK1_RS17410 PF04324 BFD-like [2Fe-2S] binding domain ABK1_RS17415 PF00210 Ferritin-like domain ABK1_RS17420 PF15864 Protein glycosylation ligase ABK1_RS17420 PF11846 Virulence factor membrane-bound polymerase, C-terminal ABK1_RS17420 PF04932 O-Antigen ligase ABK1_RS17430 PF13737 Transposase DDE domain ABK1_RS17440 PF00114 Pilin (bacterial filament) ABK1_RS17440 PF07963 Prokaryotic N-terminal methylation motif ABK1_RS17450 PF04536 TPM domain ABK1_RS17455 PF04011 LemA family ABK1_RS17465 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABK1_RS17465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABK1_RS17470 PF01493 GXGXG motif ABK1_RS17470 PF00310 Glutamine amidotransferases class-II ABK1_RS17470 PF04898 Glutamate synthase central domain ABK1_RS17470 PF01645 Conserved region in glutamate synthase ABK1_RS17480 PF01761 3-dehydroquinate synthase ABK1_RS17485 PF01202 Shikimate kinase ABK1_RS17490 PF03958 Bacterial type II/III secretion system short domain ABK1_RS17490 PF11741 AMIN domain ABK1_RS17490 PF07660 Secretin and TonB N terminus short domain ABK1_RS17490 PF00263 Bacterial type II and III secretion system protein ABK1_RS17500 PF04350 Pilus assembly protein, PilO ABK1_RS17505 PF05137 Fimbrial assembly protein (PilN) ABK1_RS17510 PF11104 Type IV pilus assembly protein PilM; ABK1_RS17515 PF00912 Transglycosylase ABK1_RS17515 PF00905 Penicillin binding protein transpeptidase domain ABK1_RS17515 PF17092 Penicillin-binding protein OB-like domain ABK1_RS17520 PF13847 Methyltransferase domain ABK1_RS17530 PF00953 Glycosyl transferase family 4 ABK1_RS17535 PF01225 Mur ligase family, catalytic domain ABK1_RS17535 PF02875 Mur ligase family, glutamate ligase domain ABK1_RS17535 PF08245 Mur ligase middle domain ABK1_RS17540 PF08245 Mur ligase middle domain ABK1_RS17540 PF02875 Mur ligase family, glutamate ligase domain ABK1_RS17540 PF01225 Mur ligase family, catalytic domain ABK1_RS17545 PF00905 Penicillin binding protein transpeptidase domain ABK1_RS17545 PF03717 Penicillin-binding Protein dimerisation domain ABK1_RS17555 PF01795 MraW methylase family ABK1_RS17570 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABK1_RS17585 PF00324 Amino acid permease ABK1_RS17615 PF01545 Cation efflux family ABK1_RS17620 PF00873 AcrB/AcrD/AcrF family ABK1_RS17625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABK1_RS17625 PF00529 HlyD membrane-fusion protein of T1SS ABK1_RS17650 PF12848 ABC transporter ABK1_RS17650 PF00005 ABC transporter ABK1_RS17655 PF01053 Cys/Met metabolism PLP-dependent enzyme ABK1_RS17660 PF00106 short chain dehydrogenase ABK1_RS17665 PF01740 STAS domain ABK1_RS17665 PF00916 Sulfate permease family ABK1_RS17670 PF00575 S1 RNA binding domain ABK1_RS17670 PF17674 HHH domain ABK1_RS17670 PF09371 Tex-like protein N-terminal domain ABK1_RS17670 PF16921 Tex protein YqgF-like domain ABK1_RS17675 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS17675 PF00072 Response regulator receiver domain ABK1_RS17680 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS17680 PF00672 HAMP domain ABK1_RS17685 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABK1_RS17685 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABK1_RS17690 PF00583 Acetyltransferase (GNAT) family ABK1_RS17710 PF00475 Imidazoleglycerol-phosphate dehydratase ABK1_RS17715 PF00117 Glutamine amidotransferase class-I ABK1_RS17730 PF00977 Histidine biosynthesis protein ABK1_RS17755 PF01636 Phosphotransferase enzyme family ABK1_RS17760 PF00977 Histidine biosynthesis protein ABK1_RS17775 PF00230 Major intrinsic protein ABK1_RS17800 PF02705 K+ potassium transporter ABK1_RS17810 PF12833 Helix-turn-helix domain ABK1_RS17830 PF02525 Flavodoxin-like fold ABK1_RS17835 PF01638 HxlR-like helix-turn-helix ABK1_RS17850 PF13737 Transposase DDE domain ABK1_RS17860 PF01638 HxlR-like helix-turn-helix ABK1_RS17875 PF02311 AraC-like ligand binding domain ABK1_RS17875 PF12833 Helix-turn-helix domain ABK1_RS17880 PF00248 Aldo/keto reductase family ABK1_RS17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS17905 PF03466 LysR substrate binding domain ABK1_RS17910 PF07690 Major Facilitator Superfamily ABK1_RS17930 PF01593 Flavin containing amine oxidoreductase ABK1_RS17935 PF05726 Pirin C-terminal cupin domain ABK1_RS17935 PF02678 Pirin ABK1_RS17940 PF00857 Isochorismatase family ABK1_RS17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS17950 PF00171 Aldehyde dehydrogenase family ABK1_RS17955 PF00202 Aminotransferase class-III ABK1_RS17960 PF00155 Aminotransferase class I and II ABK1_RS17960 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS17965 PF00324 Amino acid permease ABK1_RS17975 PF03591 AzlC protein ABK1_RS17985 PF00436 Single-strand binding protein family ABK1_RS17990 PF07690 Major Facilitator Superfamily ABK1_RS18000 PF08543 Phosphomethylpyrimidine kinase ABK1_RS18000 PF02581 Thiamine monophosphate synthase ABK1_RS18000 PF03070 TENA/THI-4/PQQC family ABK1_RS18005 PF06942 GlpM protein ABK1_RS18015 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS18015 PF00107 Zinc-binding dehydrogenase ABK1_RS18020 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS18020 PF16925 Tetracyclin repressor-like, C-terminal domain ABK1_RS18025 PF17760 UvrA interaction domain ABK1_RS18025 PF17755 UvrA DNA-binding domain ABK1_RS18025 PF00005 ABC transporter ABK1_RS18030 PF00990 Diguanylate cyclase, GGDEF domain ABK1_RS18040 PF02028 BCCT, betaine/carnitine/choline family transporter ABK1_RS18050 PF00474 Sodium:solute symporter family ABK1_RS18055 PF04341 Protein of unknown function, DUF485 ABK1_RS18060 PF00072 Response regulator receiver domain ABK1_RS18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS18060 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS18060 PF01627 Hpt domain ABK1_RS18060 PF00672 HAMP domain ABK1_RS18070 PF00196 Bacterial regulatory proteins, luxR family ABK1_RS18070 PF00072 Response regulator receiver domain ABK1_RS18075 PF03358 NADPH-dependent FMN reductase ABK1_RS18080 PF00296 Luciferase-like monooxygenase ABK1_RS18085 PF01037 Lrp/AsnC ligand binding domain ABK1_RS18090 PF00857 Isochorismatase family ABK1_RS18095 PF16177 Acetyl-coenzyme A synthetase N-terminus ABK1_RS18095 PF00501 AMP-binding enzyme ABK1_RS18095 PF13193 AMP-binding enzyme C-terminal domain ABK1_RS18105 PF00924 Mechanosensitive ion channel ABK1_RS18110 PF04452 RNA methyltransferase ABK1_RS18115 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABK1_RS18120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABK1_RS18130 PF03462 PCRF domain ABK1_RS18130 PF00472 RF-1 domain ABK1_RS18140 PF17768 RecJ OB domain ABK1_RS18140 PF02272 DHHA1 domain ABK1_RS18140 PF01368 DHH family ABK1_RS18145 PF01243 Pyridoxamine 5'-phosphate oxidase ABK1_RS18145 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABK1_RS18150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABK1_RS18150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABK1_RS18150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABK1_RS18150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABK1_RS18155 PF00478 IMP dehydrogenase / GMP reductase domain ABK1_RS18155 PF00571 CBS domain ABK1_RS18160 PF03692 Putative zinc- or iron-chelating domain ABK1_RS18165 PF01613 Flavin reductase like domain ABK1_RS18165 PF00258 Flavodoxin ABK1_RS18170 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS18170 PF00593 TonB dependent receptor ABK1_RS18185 PF01169 Uncharacterized protein family UPF0016 ABK1_RS18195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABK1_RS18195 PF02817 e3 binding domain ABK1_RS18195 PF00364 Biotin-requiring enzyme ABK1_RS18200 PF00456 Transketolase, thiamine diphosphate binding domain ABK1_RS18200 PF17831 Pyruvate dehydrogenase E1 component middle domain ABK1_RS18205 PF01551 Peptidase family M23 ABK1_RS18215 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABK1_RS18220 PF00091 Tubulin/FtsZ family, GTPase domain ABK1_RS18220 PF12327 FtsZ family, C-terminal domain ABK1_RS18225 PF02491 SHS2 domain inserted in FTSA ABK1_RS18230 PF03799 Cell division protein FtsQ ABK1_RS18230 PF08478 POTRA domain, FtsQ-type ABK1_RS18235 PF07478 D-ala D-ala ligase C-terminus ABK1_RS18235 PF01820 D-ala D-ala ligase N-terminus ABK1_RS18240 PF01225 Mur ligase family, catalytic domain ABK1_RS18240 PF08245 Mur ligase middle domain ABK1_RS18240 PF02875 Mur ligase family, glutamate ligase domain ABK1_RS18245 PF03033 Glycosyltransferase family 28 N-terminal domain ABK1_RS18245 PF04101 Glycosyltransferase family 28 C-terminal domain ABK1_RS18250 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABK1_RS18250 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABK1_RS18260 PF00593 TonB dependent receptor ABK1_RS18260 PF07715 TonB-dependent Receptor Plug Domain ABK1_RS18265 PF00156 Phosphoribosyl transferase domain ABK1_RS18270 PF03372 Endonuclease/Exonuclease/phosphatase family ABK1_RS18275 PF03960 ArsC family ABK1_RS18285 PF07859 alpha/beta hydrolase fold ABK1_RS18295 PF11412 Disulphide bond corrector protein DsbC ABK1_RS18295 PF02683 Cytochrome C biogenesis protein transmembrane region ABK1_RS18325 PF00576 HIUase/Transthyretin family ABK1_RS18330 PF00860 Permease family ABK1_RS18340 PF01494 FAD binding domain ABK1_RS18345 PF03561 Allantoicase repeat ABK1_RS18350 PF04115 Ureidoglycolate lyase ABK1_RS18355 PF01751 Toprim domain ABK1_RS18355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS18355 PF00986 DNA gyrase B subunit, carboxyl terminus ABK1_RS18355 PF00204 DNA gyrase B ABK1_RS18360 PF05728 Uncharacterised protein family (UPF0227) ABK1_RS18385 PF00182 Chitinase class I ABK1_RS18390 PF13296 Putative type VI secretion system Rhs element Vgr ABK1_RS18390 PF04717 Type VI secretion system, phage-baseplate injector ABK1_RS18390 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABK1_RS18395 PF02600 Disulfide bond formation protein DsbB ABK1_RS18400 PF04262 Glutamate-cysteine ligase ABK1_RS18415 PF04286 Protein of unknown function (DUF445) ABK1_RS18420 PF00155 Aminotransferase class I and II ABK1_RS18425 PF01554 MatE ABK1_RS18430 PF00106 short chain dehydrogenase ABK1_RS18440 PF00486 Transcriptional regulatory protein, C terminal ABK1_RS18440 PF00072 Response regulator receiver domain ABK1_RS18445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABK1_RS18445 PF00512 His Kinase A (phospho-acceptor) domain ABK1_RS18445 PF00989 PAS fold ABK1_RS18445 PF11808 Phosphate regulon sensor protein PhoR ABK1_RS18455 PF13737 Transposase DDE domain ABK1_RS18465 PF03069 Acetamidase/Formamidase family ABK1_RS18470 PF02666 Phosphatidylserine decarboxylase ABK1_RS18475 PF00581 Rhodanese-like domain ABK1_RS18480 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABK1_RS18480 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABK1_RS18490 PF06628 Catalase-related immune-responsive ABK1_RS18490 PF00199 Catalase ABK1_RS18495 PF02580 D-Tyr-tRNA(Tyr) deacylase ABK1_RS18520 PF00925 GTP cyclohydrolase II ABK1_RS18520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABK1_RS18525 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABK1_RS18530 PF01029 NusB family ABK1_RS18535 PF02769 AIR synthase related protein, C-terminal domain ABK1_RS18535 PF00586 AIR synthase related protein, N-terminal domain ABK1_RS18540 PF04608 Phosphatidylglycerophosphatase A ABK1_RS18545 PF12804 MobA-like NTP transferase domain ABK1_RS18545 PF14602 Hexapeptide repeat of succinyl-transferase ABK1_RS18545 PF00132 Bacterial transferase hexapeptide (six repeats) ABK1_RS18550 PF01380 SIS domain ABK1_RS18555 PF01177 Asp/Glu/Hydantoin racemase ABK1_RS18560 PF13419 Haloacid dehalogenase-like hydrolase ABK1_RS18570 PF00491 Arginase family ABK1_RS18575 PF01979 Amidohydrolase family ABK1_RS18580 PF00324 Amino acid permease ABK1_RS18585 PF00221 Aromatic amino acid lyase ABK1_RS18590 PF17391 Urocanase N-terminal domain ABK1_RS18590 PF01175 Urocanase Rossmann-like domain ABK1_RS18590 PF17392 Urocanase C-terminal domain ABK1_RS18595 PF05962 HutD ABK1_RS18600 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS18600 PF07702 UTRA domain ABK1_RS18610 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABK1_RS18610 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABK1_RS18620 PF00324 Amino acid permease ABK1_RS18630 PF14497 Glutathione S-transferase, C-terminal domain ABK1_RS18630 PF02798 Glutathione S-transferase, N-terminal domain ABK1_RS18645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABK1_RS18650 PF04463 Protein of unknown function (DUF523) ABK1_RS18655 PF01554 MatE ABK1_RS18660 PF01758 Sodium Bile acid symporter family ABK1_RS18665 PF00857 Isochorismatase family ABK1_RS18670 PF00701 Dihydrodipicolinate synthetase family ABK1_RS18680 PF01259 SAICAR synthetase ABK1_RS18695 PF01226 Formate/nitrite transporter ABK1_RS18700 PF12002 MgsA AAA+ ATPase C terminal ABK1_RS18700 PF00004 ATPase family associated with various cellular activities (AAA) ABK1_RS18700 PF16193 AAA C-terminal domain ABK1_RS18705 PF07995 Glucose / Sorbosone dehydrogenase ABK1_RS18710 PF03692 Putative zinc- or iron-chelating domain ABK1_RS18715 PF07043 Protein of unknown function (DUF1328) ABK1_RS18745 PF03352 Methyladenine glycosylase ABK1_RS18750 PF08240 Alcohol dehydrogenase GroES-like domain ABK1_RS18750 PF00107 Zinc-binding dehydrogenase ABK1_RS18755 PF00392 Bacterial regulatory proteins, gntR family ABK1_RS18755 PF00155 Aminotransferase class I and II ABK1_RS18765 PF03466 LysR substrate binding domain ABK1_RS18765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS18770 PF00248 Aldo/keto reductase family ABK1_RS18775 PF07690 Major Facilitator Superfamily ABK1_RS18785 PF05173 Dihydrodipicolinate reductase, C-terminus ABK1_RS18785 PF01113 Dihydrodipicolinate reductase, N-terminus ABK1_RS18795 PF01556 DnaJ C terminal domain ABK1_RS18795 PF00226 DnaJ domain ABK1_RS18795 PF00684 DnaJ central domain ABK1_RS18805 PF00873 AcrB/AcrD/AcrF family ABK1_RS18810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABK1_RS18815 PF00440 Bacterial regulatory proteins, tetR family ABK1_RS18815 PF08361 MAATS-type transcriptional repressor, C-terminal region ABK1_RS18820 PF00311 Phosphoenolpyruvate carboxylase ABK1_RS18825 PF00860 Permease family ABK1_RS18830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABK1_RS18830 PF03466 LysR substrate binding domain ABK1_RS18845 PF00920 Dehydratase family ABK1_RS18850 PF00551 Formyl transferase ABK1_RS18850 PF02911 Formyl transferase, C-terminal domain ABK1_RS18855 PF01189 16S rRNA methyltransferase RsmB/F ABK1_RS18855 PF01029 NusB family ABK1_RS18865 PF00209 Sodium:neurotransmitter symporter family ABK1_RS18920 PF00579 tRNA synthetases class I (W and Y) ABK1_RS18990 PF12848 ABC transporter ABK1_RS18990 PF00005 ABC transporter ABK1_RS19020 PF08299 Bacterial dnaA protein helix-turn-helix ABK1_RS19020 PF00308 Bacterial dnaA protein ABK1_RS19020 PF11638 DnaA N-terminal domain