locus-tag	class	description
ABK1_RS00010	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABK1_RS00015	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABK1_RS00020	COG0596	Alpha beta hydrolase
ABK1_RS00045	COG0488	(ABC) transporter
ABK1_RS00050	COG0586	Pfam SNARE associated Golgi protein
ABK1_RS00060	COG0187	DNA topoisomerase II activity
ABK1_RS00070	COG0592	DNA-directed DNA polymerase activity
ABK1_RS00095	COG0706	membrane insertase activity
ABK1_RS00110	COG1230	cation diffusion facilitator family transporter
ABK1_RS00115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABK1_RS00135	COG0402	S-adenosylhomocysteine deaminase activity
ABK1_RS00145	COG0754	glutathionylspermidine amidase activity
ABK1_RS00155	COG0861	Integral membrane protein TerC family
ABK1_RS00160	COG0671	phosphoesterase, PA-phosphatase related
ABK1_RS00170	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABK1_RS00185	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABK1_RS00190	COG2951	lytic endotransglycosylase activity
ABK1_RS00220	COG0583	DNA-binding transcription factor activity
ABK1_RS00240	COG0657	acetylesterase activity
ABK1_RS00245	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABK1_RS00285	COG1047	Peptidyl-prolyl cis-trans
ABK1_RS00295	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABK1_RS00300	COG0196	riboflavin kinase activity
ABK1_RS00310	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABK1_RS00315	COG1309	transcriptional regulator
ABK1_RS00320	COG1116	anion transmembrane transporter activity
ABK1_RS00325	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABK1_RS00330	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABK1_RS00335	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABK1_RS00340	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABK1_RS00360	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS00365	COG0546	phosphoglycolate phosphatase activity
ABK1_RS00420	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABK1_RS00425	COG0728	peptidoglycan biosynthetic process
ABK1_RS00455	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABK1_RS00460	COG1086	Polysaccharide biosynthesis protein
ABK1_RS00465	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABK1_RS00470	COG1083	cytidylyl-transferase
ABK1_RS00485	COG2089	acid synthase
ABK1_RS00490	COG2244	polysaccharide biosynthetic process
ABK1_RS00510	COG1216	Glycosyl transferase, family 2
ABK1_RS00520	COG1216	Glycosyl transferase, family 2
ABK1_RS00525	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABK1_RS00530	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABK1_RS00545	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABK1_RS00550	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABK1_RS00560	COG2186	Transcriptional regulator
ABK1_RS00570	COG0277	FAD linked oxidase domain protein
ABK1_RS00575	COG1448	Aminotransferase
ABK1_RS00580	COG1802	Transcriptional regulator
ABK1_RS00595	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABK1_RS00610	COG1051	belongs to the nudix hydrolase family
ABK1_RS00640	COG0564	pseudouridine synthase activity
ABK1_RS00680	COG0251	oxidation-reduction process
ABK1_RS00685	COG1113	amino acid transport
ABK1_RS00690	COG1113	amino acid transport
ABK1_RS00710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABK1_RS00715	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS00720	COG1024	Enoyl-CoA hydratase
ABK1_RS00725	COG1024	Enoyl-CoA hydratase
ABK1_RS00730	COG0477	Major facilitator Superfamily
ABK1_RS00735	COG3916	Acyl-homoserine-lactone synthase
ABK1_RS00745	COG2197	response regulator
ABK1_RS00755	COG2197	response regulator
ABK1_RS00765	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS00770	COG0300	oxidoreductase activity
ABK1_RS00770	COG3321	synthase
ABK1_RS00770	COG4221	oxidoreductase activity
ABK1_RS00770	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABK1_RS00790	COG2267	carboxylic ester hydrolase activity
ABK1_RS00810	COG0271	Belongs to the BolA IbaG family
ABK1_RS00820	COG1192	Involved in chromosome partitioning
ABK1_RS00835	COG0586	Pfam SNARE associated Golgi protein
ABK1_RS00840	COG2259	Doxx family
ABK1_RS00845	COG4399	Belongs to the UPF0754 family
ABK1_RS00850	COG0519	Catalyzes the synthesis of GMP from XMP
ABK1_RS00850	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABK1_RS00895	COG0281	malic enzyme
ABK1_RS00905	COG2837	iron assimilation
ABK1_RS00910	COG1280	lysine exporter protein (LysE YggA)
ABK1_RS00915	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABK1_RS00920	COG1121	(ABC) transporter
ABK1_RS00985	COG0386	Belongs to the glutathione peroxidase family
ABK1_RS01000	COG1309	transcriptional regulator
ABK1_RS01005	COG0697	spore germination
ABK1_RS01015	COG0758	DNA mediated transformation
ABK1_RS01050	COG1309	transcriptional regulator
ABK1_RS01085	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABK1_RS01095	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABK1_RS01130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABK1_RS01140	COG2814	Major facilitator Superfamily
ABK1_RS01150	COG1253	flavin adenine dinucleotide binding
ABK1_RS01160	COG2860	membrane
ABK1_RS01165	COG0477	Major facilitator Superfamily
ABK1_RS01175	COG0318	PFAM AMP-dependent synthetase and ligase
ABK1_RS01190	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABK1_RS01205	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABK1_RS01215	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABK1_RS01220	COG0606	chelatase, subunit chli
ABK1_RS01250	COG0589	response to stress
ABK1_RS01255	COG0659	secondary active sulfate transmembrane transporter activity
ABK1_RS01285	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABK1_RS01335	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABK1_RS01410	COG0606	chelatase, subunit chli
ABK1_RS01420	COG0347	Belongs to the P(II) protein family
ABK1_RS01425	COG0004	ammonium transporteR
ABK1_RS01435	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABK1_RS01435	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABK1_RS01475	COG0795	lipopolysaccharide-transporting ATPase activity
ABK1_RS01480	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABK1_RS01485	COG0793	Belongs to the peptidase S41A family
ABK1_RS01500	COG2197	response regulator
ABK1_RS01510	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABK1_RS01520	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABK1_RS01525	COG4974	Belongs to the 'phage' integrase family
ABK1_RS01550	COG0772	Belongs to the SEDS family
ABK1_RS01555	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABK1_RS01560	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABK1_RS01565	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABK1_RS01590	COG0697	spore germination
ABK1_RS01595	COG1538	Outer membrane efflux protein
ABK1_RS01615	COG3275	phosphorelay sensor kinase activity
ABK1_RS01625	COG0181	hydroxymethylbilane synthase activity
ABK1_RS01670	COG1716	ATPase activity
ABK1_RS01675	COG0546	phosphoglycolate phosphatase activity
ABK1_RS01770	COG0596	Alpha beta hydrolase
ABK1_RS01775	COG2056	Na+-H+ antiporter family
ABK1_RS01790	COG0326	Molecular chaperone. Has ATPase activity
ABK1_RS01805	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABK1_RS01870	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABK1_RS01875	COG2169	Transcriptional regulator
ABK1_RS01875	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABK1_RS01905	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABK1_RS01915	COG0497	DNA recombination
ABK1_RS01930	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABK1_RS01940	COG0237	dephospho-CoA kinase activity
ABK1_RS01990	COG0195	Participates in both transcription termination and antitermination
ABK1_RS02005	COG1320	monovalent cation:proton antiporter activity
ABK1_RS02010	COG2212	antiporter activity
ABK1_RS02015	COG1863	multisubunit Na H antiporter MnhE subunit
ABK1_RS02020	COG0651	ATP synthesis coupled electron transport
ABK1_RS02025	COG1006	Multisubunit Na H antiporter MnhC subunit
ABK1_RS02030	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABK1_RS02030	COG2111	Na H antiporter
ABK1_RS02045	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABK1_RS02050	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABK1_RS02065	COG2226	methyltransferase
ABK1_RS02085	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABK1_RS02090	COG1074	ATP-dependent DNA helicase activity
ABK1_RS02095	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABK1_RS02100	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABK1_RS02115	COG0598	Magnesium transport protein CorA
ABK1_RS02120	COG0789	Transcriptional regulator
ABK1_RS02125	COG0484	heat shock protein binding
ABK1_RS02135	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABK1_RS02140	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABK1_RS02140	COG0475	glutathione-regulated potassium exporter activity
ABK1_RS02145	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABK1_RS02175	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABK1_RS02185	COG4535	Mg2 and Co2 transporter CorC
ABK1_RS02190	COG0425	Belongs to the sulfur carrier protein TusA family
ABK1_RS02195	COG0644	oxidoreductase
ABK1_RS02195	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ABK1_RS02205	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABK1_RS02220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABK1_RS02225	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABK1_RS02260	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABK1_RS02275	COG0534	Mate efflux family protein
ABK1_RS02285	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABK1_RS02290	COG4221	oxidoreductase activity
ABK1_RS02295	COG0583	DNA-binding transcription factor activity
ABK1_RS02310	COG0318	PFAM AMP-dependent synthetase and ligase
ABK1_RS02315	COG1530	ribonuclease E activity
ABK1_RS02325	COG0546	phosphoglycolate phosphatase activity
ABK1_RS02330	COG2378	regulation of single-species biofilm formation
ABK1_RS02340	COG0625	glutathione transferase activity
ABK1_RS02350	COG0583	DNA-binding transcription factor activity
ABK1_RS02415	COG0473	3-isopropylmalate dehydrogenase activity
ABK1_RS02470	COG1301	dicarboxylic acid transport
ABK1_RS02480	COG1560	Kdo2-lipid A biosynthetic process
ABK1_RS02485	COG1280	lysine exporter protein (LysE YggA)
ABK1_RS02490	COG0488	(ABC) transporter
ABK1_RS02495	COG2900	Belongs to the SlyX family
ABK1_RS02505	COG1733	regulation of RNA biosynthetic process
ABK1_RS02530	COG0210	DNA helicase
ABK1_RS02535	COG0724	RNA recognition motif
ABK1_RS02555	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABK1_RS02555	COG4651	solute:proton antiporter activity
ABK1_RS02580	COG0788	formyltetrahydrofolate deformylase activity
ABK1_RS02680	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABK1_RS02680	COG2813	Specifically methylates the guanine in position
ABK1_RS02690	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABK1_RS02700	COG4774	siderophore transport
ABK1_RS02710	COG0740	serine-type endopeptidase activity
ABK1_RS02730	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABK1_RS02730	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABK1_RS02735	COG0857	belongs to the CobB CobQ family
ABK1_RS02735	COG0280	phosphate acetyltransferase
ABK1_RS02740	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABK1_RS02750	COG0800	Aldolase
ABK1_RS02760	COG3265	gluconokinase activity
ABK1_RS02765	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS02775	COG2267	carboxylic ester hydrolase activity
ABK1_RS02790	COG0793	Belongs to the peptidase S41A family
ABK1_RS02825	COG1426	Protein conserved in bacteria
ABK1_RS02880	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABK1_RS02890	COG0318	PFAM AMP-dependent synthetase and ligase
ABK1_RS02905	COG2986	histidine ammonia-lyase
ABK1_RS02945	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS02950	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABK1_RS02970	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABK1_RS02980	COG1162	GTPase activity
ABK1_RS02985	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABK1_RS03000	COG1538	Outer membrane efflux protein
ABK1_RS03005	COG1136	(ABC) transporter
ABK1_RS03005	COG0577	efflux transmembrane transporter activity
ABK1_RS03010	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABK1_RS03035	COG0028	Belongs to the TPP enzyme family
ABK1_RS03040	COG0440	acetolactate synthase activity
ABK1_RS03070	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABK1_RS03085	COG0084	hydrolase, TatD family'
ABK1_RS03100	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABK1_RS03105	COG0583	DNA-binding transcription factor activity
ABK1_RS03115	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABK1_RS03120	COG2814	Major facilitator Superfamily
ABK1_RS03130	COG0697	spore germination
ABK1_RS03160	COG3622	Belongs to the hyi family
ABK1_RS03165	COG2084	Dehydrogenase
ABK1_RS03170	COG1024	Enoyl-CoA hydratase
ABK1_RS03175	COG0784	Response regulator, receiver
ABK1_RS03175	COG2205	protein histidine kinase activity
ABK1_RS03175	COG5002	protein histidine kinase activity
ABK1_RS03195	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABK1_RS03205	COG3956	TIGRFAM MazG family protein
ABK1_RS03210	COG1555	photosystem II stabilization
ABK1_RS03215	COG0617	tRNA 3'-terminal CCA addition
ABK1_RS03220	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABK1_RS03240	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABK1_RS03245	COG3028	Belongs to the UPF0307 family
ABK1_RS03250	COG0318	PFAM AMP-dependent synthetase and ligase
ABK1_RS03265	COG0625	glutathione transferase activity
ABK1_RS03270	COG1238	metal cluster binding
ABK1_RS03310	COG0072	phenylalanine-tRNA ligase activity
ABK1_RS03340	COG0248	Ppx GppA phosphatase
ABK1_RS03350	COG0037	tRNA processing
ABK1_RS03390	COG1764	response to oxidative stress
ABK1_RS03395	COG1846	Transcriptional regulator
ABK1_RS03405	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABK1_RS03465	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABK1_RS03470	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABK1_RS03475	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABK1_RS03485	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABK1_RS03535	COG1214	PFAM Peptidase M22, glycoprotease
ABK1_RS03560	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABK1_RS03565	COG0561	phosphatase activity
ABK1_RS03575	COG2132	Multicopper oxidase
ABK1_RS03580	COG3667	copper resistance
ABK1_RS03595	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABK1_RS03600	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABK1_RS03605	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABK1_RS03635	COG1063	alcohol dehydrogenase
ABK1_RS03640	COG0583	DNA-binding transcription factor activity
ABK1_RS03645	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS03650	COG2814	Major facilitator Superfamily
ABK1_RS03655	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABK1_RS03665	COG1053	succinate dehydrogenase
ABK1_RS03670	COG0583	DNA-binding transcription factor activity
ABK1_RS03685	COG0583	DNA-binding transcription factor activity
ABK1_RS03715	COG0583	DNA-binding transcription factor activity
ABK1_RS03730	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABK1_RS03755	COG0384	phenazine biosynthesis protein PhzF
ABK1_RS03780	COG4993	Dehydrogenase
ABK1_RS03860	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABK1_RS03880	COG0745	RESPONSE REGULATOR receiver
ABK1_RS03920	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ABK1_RS03950	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABK1_RS03955	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABK1_RS03975	COG0583	DNA-binding transcription factor activity
ABK1_RS03995	COG0668	transmembrane transport
ABK1_RS04005	COG2081	HI0933 family
ABK1_RS04010	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ABK1_RS04040	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABK1_RS04040	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABK1_RS04050	COG0489	protein tyrosine kinase activity
ABK1_RS04100	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABK1_RS04110	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABK1_RS04125	COG0730	response to heat
ABK1_RS04135	COG1196	nuclear chromosome segregation
ABK1_RS04155	COG2223	nitrite transmembrane transporter activity
ABK1_RS04160	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABK1_RS04165	COG1877	trehalose-phosphatase activity
ABK1_RS04170	COG2226	methyltransferase
ABK1_RS04170	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABK1_RS04170	COG0596	Alpha beta hydrolase
ABK1_RS04185	COG4106	trans-aconitate 2-methyltransferase activity
ABK1_RS04200	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABK1_RS04205	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABK1_RS04210	COG0009	L-threonylcarbamoyladenylate synthase
ABK1_RS04215	COG3101	peptidyl-lysine hydroxylation
ABK1_RS04220	COG1399	metal-binding, possibly nucleic acid-binding protein
ABK1_RS04245	COG1652	LysM domain
ABK1_RS04250	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABK1_RS04250	COG0352	thiamine-phosphate diphosphorylase activity
ABK1_RS04250	COG0351	phosphomethylpyrimidine kinase
ABK1_RS04260	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABK1_RS04290	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABK1_RS04320	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABK1_RS04335	COG0358	DNA primase activity
ABK1_RS04345	COG0564	pseudouridine synthase activity
ABK1_RS04370	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABK1_RS04385	COG0583	DNA-binding transcription factor activity
ABK1_RS04390	COG0473	3-isopropylmalate dehydrogenase activity
ABK1_RS04400	COG0657	acetylesterase activity
ABK1_RS04410	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS04430	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABK1_RS04430	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABK1_RS04445	COG1981	membrane
ABK1_RS04490	COG0456	acetyltransferase
ABK1_RS04500	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABK1_RS04505	COG0492	ferredoxin-NADP+ reductase activity
ABK1_RS04510	COG1674	ftsk spoiiie
ABK1_RS04510	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABK1_RS04515	COG1280	lysine exporter protein (LysE YggA)
ABK1_RS04535	COG2894	cell division
ABK1_RS04550	COG0204	Acyl-transferase
ABK1_RS04555	COG2885	chlorophyll binding
ABK1_RS04560	COG0210	DNA helicase
ABK1_RS04570	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABK1_RS04585	COG0121	glutamine amidotransferase
ABK1_RS04605	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABK1_RS04610	COG0735	belongs to the Fur family
ABK1_RS04635	COG0420	3'-5' exonuclease activity
ABK1_RS04655	COG1090	epimerase
ABK1_RS04670	COG2050	protein possibly involved in aromatic compounds catabolism
ABK1_RS04680	COG2814	Major facilitator Superfamily
ABK1_RS04685	COG0405	Gamma-glutamyltransferase
ABK1_RS04725	COG0477	Major facilitator Superfamily
ABK1_RS04730	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABK1_RS04755	COG0531	amino acid
ABK1_RS04760	COG2040	homocysteine
ABK1_RS04785	COG1309	transcriptional regulator
ABK1_RS04790	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABK1_RS04795	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABK1_RS04805	COG1607	acyl-coa hydrolase
ABK1_RS04815	COG0523	cobalamin synthesis protein
ABK1_RS04825	COG4681	YaeQ
ABK1_RS04835	COG0726	polysaccharide deacetylase
ABK1_RS04835	COG1649	PFAM Uncharacterised BCR, COG1649
ABK1_RS04840	COG1215	transferase activity, transferring glycosyl groups
ABK1_RS04850	COG1024	Enoyl-CoA hydratase
ABK1_RS04865	COG1414	Transcriptional regulator
ABK1_RS04885	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS04895	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABK1_RS04900	COG2271	Major facilitator Superfamily
ABK1_RS04910	COG2267	carboxylic ester hydrolase activity
ABK1_RS04915	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS04930	COG0028	Belongs to the TPP enzyme family
ABK1_RS04940	COG0477	Major facilitator Superfamily
ABK1_RS04945	COG0242	peptide deformylase activity
ABK1_RS04950	COG2066	Belongs to the glutaminase family
ABK1_RS04955	COG2207	Transcriptional regulator
ABK1_RS04960	COG2223	nitrite transmembrane transporter activity
ABK1_RS04975	COG0583	DNA-binding transcription factor activity
ABK1_RS04980	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS04985	COG2271	Major facilitator Superfamily
ABK1_RS04990	COG3959	Transketolase, thiamine diphosphate binding domain
ABK1_RS04995	COG3958	Transketolase
ABK1_RS05005	COG0306	phosphate transporter
ABK1_RS05025	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABK1_RS05070	COG4181	ATPase activity
ABK1_RS05075	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABK1_RS05100	COG0583	DNA-binding transcription factor activity
ABK1_RS05110	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABK1_RS05115	COG1773	rubredoxin
ABK1_RS05160	COG2851	Citrate transporter
ABK1_RS05170	COG1253	flavin adenine dinucleotide binding
ABK1_RS05210	COG0804	urea catabolic process
ABK1_RS05220	COG0830	nickel cation binding
ABK1_RS05235	COG0742	ribosomal rna small subunit methyltransferase
ABK1_RS05240	COG0768	penicillin binding
ABK1_RS05260	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABK1_RS05265	COG2878	Part of a membrane complex involved in electron transport
ABK1_RS05270	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABK1_RS05280	COG3384	dioxygenase
ABK1_RS05305	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABK1_RS05630	COG0739	heme binding
ABK1_RS05690	COG2194	sulfuric ester hydrolase activity
ABK1_RS05720	COG0006	proline dipeptidase activity
ABK1_RS05725	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABK1_RS05730	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABK1_RS05750	COG1279	arginine transmembrane transporter activity
ABK1_RS05755	COG0583	DNA-binding transcription factor activity
ABK1_RS05795	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABK1_RS05800	COG1388	LysM domain
ABK1_RS05800	COG0741	lytic transglycosylase activity
ABK1_RS05800	COG1388	LysM domain
ABK1_RS05800	COG0741	lytic transglycosylase activity
ABK1_RS05810	COG4174	ABC transporter (Permease)
ABK1_RS05815	COG4239	(ABC) transporter, permease
ABK1_RS05820	COG4172	Belongs to the ABC transporter superfamily
ABK1_RS05840	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABK1_RS05850	COG4251	negative regulation of phosphorylation
ABK1_RS05850	COG3706	GGDEF domain
ABK1_RS05850	COG2203	Gaf domain
ABK1_RS05850	COG5001	Diguanylate cyclase
ABK1_RS05860	COG1902	pentaerythritol trinitrate reductase activity
ABK1_RS05860	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABK1_RS05875	COG4269	membrane
ABK1_RS05940	COG0789	Transcriptional regulator
ABK1_RS06020	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABK1_RS06025	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABK1_RS06040	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS06045	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABK1_RS06050	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABK1_RS06065	COG2223	nitrite transmembrane transporter activity
ABK1_RS06075	COG0024	Methionine aminopeptidase
ABK1_RS06080	COG0052	Belongs to the universal ribosomal protein uS2 family
ABK1_RS06095	COG2207	Transcriptional regulator
ABK1_RS06120	COG2951	lytic endotransglycosylase activity
ABK1_RS06125	COG0772	Belongs to the SEDS family
ABK1_RS06140	COG0842	Transport permease protein
ABK1_RS06145	COG1131	(ABC) transporter
ABK1_RS06190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABK1_RS06205	COG4215	(ABC) transporter
ABK1_RS06210	COG4160	amino acid transport
ABK1_RS06215	COG4598	ABC transporter
ABK1_RS06225	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABK1_RS06230	COG0826	peptidase U32
ABK1_RS06235	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABK1_RS06250	COG1720	tRNA m6t6A37 methyltransferase activity
ABK1_RS06260	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ABK1_RS06275	COG0642	Histidine kinase
ABK1_RS06285	COG0494	nUDIX hydrolase
ABK1_RS06295	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABK1_RS06300	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABK1_RS06305	COG3139	Protein of unknown function (DUF1315)
ABK1_RS06310	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABK1_RS06315	COG1301	dicarboxylic acid transport
ABK1_RS06320	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS06325	COG2819	hydrolase of the alpha beta superfamily
ABK1_RS06335	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABK1_RS06345	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABK1_RS06350	COG1234	tRNA 3'-trailer cleavage
ABK1_RS06380	COG2363	Small membrane protein
ABK1_RS06400	COG0513	Belongs to the DEAD box helicase family
ABK1_RS06410	COG0778	Nitroreductase
ABK1_RS06440	COG1286	toxin biosynthetic process
ABK1_RS06465	COG4783	chaperone-mediated protein folding
ABK1_RS06470	COG1610	YqeY-like protein
ABK1_RS06575	COG3111	PFAM Bacterial OB fold (BOF) protein
ABK1_RS06600	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABK1_RS06605	COG0786	glutamate:sodium symporter activity
ABK1_RS06615	COG2186	Transcriptional regulator
ABK1_RS06680	COG0477	Major facilitator Superfamily
ABK1_RS06705	COG2985	domain, Protein
ABK1_RS06715	COG2995	paraquat-inducible protein a
ABK1_RS06720	COG3008	intermembrane lipid transfer
ABK1_RS06720	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABK1_RS06730	COG1794	racemase activity, acting on amino acids and derivatives
ABK1_RS06760	COG1301	dicarboxylic acid transport
ABK1_RS06770	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABK1_RS06775	COG2011	ABC-type metal ion transport system permease component
ABK1_RS06780	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABK1_RS06785	COG1464	Belongs to the NlpA lipoprotein family
ABK1_RS06790	COG0151	Belongs to the GarS family
ABK1_RS06795	COG0138	bifunctional purine biosynthesis protein purh
ABK1_RS06800	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ABK1_RS06830	COG2308	Evidence 4 Homologs of previously reported genes of
ABK1_RS06840	COG1305	Transglutaminase-like
ABK1_RS06850	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABK1_RS06855	COG0305	Participates in initiation and elongation during chromosome replication
ABK1_RS06880	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABK1_RS06890	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABK1_RS06895	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABK1_RS06920	COG1649	PFAM Uncharacterised BCR, COG1649
ABK1_RS06920	COG0726	polysaccharide deacetylase
ABK1_RS06925	COG1215	transferase activity, transferring glycosyl groups
ABK1_RS06930	COG3658	cytochrome
ABK1_RS06940	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABK1_RS06955	COG0583	DNA-binding transcription factor activity
ABK1_RS06975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABK1_RS06980	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABK1_RS06995	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS07000	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABK1_RS07005	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABK1_RS07030	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABK1_RS07035	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABK1_RS07045	COG2205	protein histidine kinase activity
ABK1_RS07050	COG0745	RESPONSE REGULATOR receiver
ABK1_RS07055	COG0174	glutamine synthetase
ABK1_RS07090	COG0776	regulation of translation
ABK1_RS07175	COG4373	Mu-like prophage FluMu protein gp28
ABK1_RS07190	COG4383	Mu-like prophage protein gp29
ABK1_RS07195	COG2369	cell adhesion
ABK1_RS07200	COG5005	Phage virion morphogenesis
ABK1_RS07215	COG4397	Mu-like prophage major head subunit gpT
ABK1_RS07315	COG0729	surface antigen
ABK1_RS07340	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABK1_RS07345	COG2814	Major facilitator Superfamily
ABK1_RS07360	COG0583	DNA-binding transcription factor activity
ABK1_RS07375	COG1187	pseudouridine synthase activity
ABK1_RS07395	COG0802	atpase or kinase
ABK1_RS07400	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABK1_RS07410	COG1923	regulation of RNA biosynthetic process
ABK1_RS07415	COG0697	spore germination
ABK1_RS07430	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABK1_RS07440	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABK1_RS07445	COG0519	Catalyzes the synthesis of GMP from XMP
ABK1_RS07445	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABK1_RS07450	COG4302	ethanolamine ammonia-lyase activity
ABK1_RS07455	COG4303	Ethanolamine ammonia lyase large subunit
ABK1_RS07460	COG0531	amino acid
ABK1_RS07480	COG1454	alcohol dehydrogenase
ABK1_RS07485	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABK1_RS07495	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ABK1_RS07515	COG0308	aminopeptidase N
ABK1_RS07525	COG4221	oxidoreductase activity
ABK1_RS07535	COG1605	Chorismate mutase
ABK1_RS07550	COG1309	transcriptional regulator
ABK1_RS07560	COG0668	transmembrane transport
ABK1_RS07590	COG4773	Receptor
ABK1_RS07610	COG0488	(ABC) transporter
ABK1_RS07615	COG0589	response to stress
ABK1_RS07635	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABK1_RS07645	COG3135	benzoate transporter
ABK1_RS07650	COG1522	sequence-specific DNA binding
ABK1_RS07660	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABK1_RS07665	COG0583	DNA-binding transcription factor activity
ABK1_RS07675	COG0183	Belongs to the thiolase family
ABK1_RS07685	COG2030	dehydratase
ABK1_RS07690	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABK1_RS07705	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABK1_RS07715	COG0824	Thioesterase
ABK1_RS07720	COG1454	alcohol dehydrogenase
ABK1_RS07730	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABK1_RS07750	COG0069	glutamate synthase activity
ABK1_RS07925	COG5410	chromosome segregation
ABK1_RS08030	COG1598	PFAM Uncharacterised protein family UPF0150
ABK1_RS08055	COG0739	heme binding
ABK1_RS08115	COG0582	viral genome integration into host DNA
ABK1_RS08130	COG0174	glutamine synthetase
ABK1_RS08140	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABK1_RS08175	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABK1_RS08180	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABK1_RS08185	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABK1_RS08205	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABK1_RS08210	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABK1_RS08235	COG2072	flavoprotein involved in K transport
ABK1_RS08240	COG0300	oxidoreductase activity
ABK1_RS08250	COG1309	transcriptional regulator
ABK1_RS08255	COG1741	Belongs to the pirin family
ABK1_RS08270	COG2072	flavoprotein involved in K transport
ABK1_RS08285	COG2252	PERMEase
ABK1_RS08290	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ABK1_RS08295	COG3038	cytochrome b561
ABK1_RS08305	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABK1_RS08315	COG0527	aspartate kinase activity
ABK1_RS08325	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABK1_RS08335	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABK1_RS08350	COG0667	Aldo Keto reductase
ABK1_RS08360	COG1765	OsmC-like protein
ABK1_RS08375	COG0542	response to heat
ABK1_RS08410	COG2885	chlorophyll binding
ABK1_RS08420	COG0625	glutathione transferase activity
ABK1_RS08425	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABK1_RS08445	COG3634	alkyl hydroperoxide reductase activity
ABK1_RS08455	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABK1_RS08465	COG0450	alkyl hydroperoxide reductase
ABK1_RS08470	COG1643	Atp-dependent helicase
ABK1_RS08485	COG2814	Major facilitator Superfamily
ABK1_RS08490	COG3135	benzoate transporter
ABK1_RS08495	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS08500	COG0543	2 iron, 2 sulfur cluster binding
ABK1_RS08500	COG0633	Ferredoxin
ABK1_RS08505	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABK1_RS08510	COG4638	Rieske (2fe-2S)
ABK1_RS08515	COG0583	DNA-binding transcription factor activity
ABK1_RS08565	COG1570	exodeoxyribonuclease VII activity
ABK1_RS08600	COG1280	lysine exporter protein (LysE YggA)
ABK1_RS08605	COG1278	Cold shock
ABK1_RS08645	COG2814	Major facilitator Superfamily
ABK1_RS08685	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ABK1_RS08685	COG0517	IMP dehydrogenase activity
ABK1_RS08690	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABK1_RS08700	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ABK1_RS08705	COG1137	ATPase activity
ABK1_RS08710	COG1538	Outer membrane efflux protein
ABK1_RS08740	COG4122	O-methyltransferase activity
ABK1_RS08750	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABK1_RS08765	COG1522	sequence-specific DNA binding
ABK1_RS08770	COG5006	permease, DMT superfamily
ABK1_RS08780	COG1560	Kdo2-lipid A biosynthetic process
ABK1_RS08790	COG2814	Major facilitator Superfamily
ABK1_RS08810	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABK1_RS08855	COG0583	DNA-binding transcription factor activity
ABK1_RS08860	COG1914	H( )-stimulated, divalent metal cation uptake system
ABK1_RS08880	COG4770	biotin carboxylase activity
ABK1_RS08885	COG0038	chloride channel
ABK1_RS08910	COG1309	transcriptional regulator
ABK1_RS08935	COG0439	Biotin carboxylase
ABK1_RS08940	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABK1_RS08945	COG1733	regulation of RNA biosynthetic process
ABK1_RS08960	COG0864	Transcriptional regulator
ABK1_RS08970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABK1_RS08975	COG1116	anion transmembrane transporter activity
ABK1_RS09100	COG0590	tRNA wobble adenosine to inosine editing
ABK1_RS09105	COG2807	transmembrane transport
ABK1_RS09120	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABK1_RS09135	COG0789	Transcriptional regulator
ABK1_RS09145	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABK1_RS09165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABK1_RS09175	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABK1_RS09190	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS09195	COG0531	amino acid
ABK1_RS09200	COG1760	l-serine dehydratase
ABK1_RS09205	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS09205	COG2030	dehydratase
ABK1_RS09210	COG3396	Phenylacetate-CoA oxygenase
ABK1_RS09215	COG3460	Phenylacetate-CoA oxygenase
ABK1_RS09220	COG3396	Phenylacetate-CoA oxygenase
ABK1_RS09225	COG2151	metal-sulfur cluster biosynthetic enzyme
ABK1_RS09230	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABK1_RS09235	COG1024	Enoyl-CoA hydratase
ABK1_RS09240	COG1024	Enoyl-CoA hydratase
ABK1_RS09245	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABK1_RS09250	COG0183	Belongs to the thiolase family
ABK1_RS09255	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABK1_RS09260	COG3327	negative regulation of DNA-templated transcription, initiation
ABK1_RS09270	COG2050	protein possibly involved in aromatic compounds catabolism
ABK1_RS09315	COG0753	catalase activity
ABK1_RS09320	COG3038	cytochrome b561
ABK1_RS09340	COG2267	carboxylic ester hydrolase activity
ABK1_RS09345	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABK1_RS09350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABK1_RS09355	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS09360	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABK1_RS09370	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS09375	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABK1_RS09380	COG0583	DNA-binding transcription factor activity
ABK1_RS09390	COG1414	Transcriptional regulator
ABK1_RS09395	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABK1_RS09405	COG1840	ABC-type Fe3 transport system, periplasmic component
ABK1_RS09410	COG3842	ATPase activity
ABK1_RS09425	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABK1_RS09430	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABK1_RS09435	COG2814	Major facilitator Superfamily
ABK1_RS09440	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS09465	COG1024	Enoyl-CoA hydratase
ABK1_RS09475	COG2814	Major facilitator Superfamily
ABK1_RS09485	COG0183	Belongs to the thiolase family
ABK1_RS09490	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABK1_RS09495	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS09500	COG1024	Enoyl-CoA hydratase
ABK1_RS09505	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS09510	COG2814	Major facilitator Superfamily
ABK1_RS09515	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABK1_RS09520	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABK1_RS09530	COG2814	Major facilitator Superfamily
ABK1_RS09540	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS09555	COG0583	DNA-binding transcription factor activity
ABK1_RS09565	COG4770	biotin carboxylase activity
ABK1_RS09570	COG1024	Enoyl-CoA hydratase
ABK1_RS09575	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABK1_RS09580	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS09585	COG1309	transcriptional regulator
ABK1_RS09590	COG0318	PFAM AMP-dependent synthetase and ligase
ABK1_RS09610	COG0583	DNA-binding transcription factor activity
ABK1_RS09660	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS09685	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABK1_RS09715	COG0784	Response regulator, receiver
ABK1_RS09715	COG2205	protein histidine kinase activity
ABK1_RS09730	COG0765	amino acid transport
ABK1_RS09735	COG0765	amino acid transport
ABK1_RS09740	COG1126	abc transporter atp-binding protein
ABK1_RS09745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABK1_RS09750	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABK1_RS09760	COG1280	lysine exporter protein (LysE YggA)
ABK1_RS09765	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABK1_RS09770	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABK1_RS09775	COG1045	serine acetyltransferase
ABK1_RS09790	COG0583	DNA-binding transcription factor activity
ABK1_RS09795	COG0625	glutathione transferase activity
ABK1_RS09800	COG0625	glutathione transferase activity
ABK1_RS09805	COG0583	DNA-binding transcription factor activity
ABK1_RS09815	COG1346	cytolysis
ABK1_RS09845	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ABK1_RS09850	COG3052	prosthetic group binding
ABK1_RS09870	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABK1_RS09890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABK1_RS09900	COG1294	oxidase, subunit
ABK1_RS09905	COG1271	oxidase subunit
ABK1_RS09925	COG0477	Major facilitator Superfamily
ABK1_RS09950	COG4521	taurine ABC transporter
ABK1_RS09955	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABK1_RS09960	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABK1_RS09965	COG2175	clavaminate synthase activity
ABK1_RS09975	COG1953	Uracil, thiamine, allantoin
ABK1_RS09985	COG0583	DNA-binding transcription factor activity
ABK1_RS09995	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABK1_RS10010	COG0640	Transcriptional regulator
ABK1_RS10015	COG0798	PFAM Bile acid sodium symporter
ABK1_RS10020	COG0583	DNA-binding transcription factor activity
ABK1_RS10035	COG3634	alkyl hydroperoxide reductase activity
ABK1_RS10075	COG0436	Aminotransferase
ABK1_RS10085	COG0386	Belongs to the glutathione peroxidase family
ABK1_RS10125	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABK1_RS10150	COG0012	GTP binding
ABK1_RS10155	COG2011	ABC-type metal ion transport system permease component
ABK1_RS10160	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABK1_RS10170	COG1464	Belongs to the NlpA lipoprotein family
ABK1_RS10200	COG0765	amino acid transport
ABK1_RS10205	COG0765	amino acid transport
ABK1_RS10210	COG1126	abc transporter atp-binding protein
ABK1_RS10220	COG1522	sequence-specific DNA binding
ABK1_RS10235	COG1309	transcriptional regulator
ABK1_RS10255	COG0583	DNA-binding transcription factor activity
ABK1_RS10265	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABK1_RS10275	COG0697	spore germination
ABK1_RS10300	COG3121	Chaperone
ABK1_RS10305	COG3539	Fimbrial protein
ABK1_RS10335	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABK1_RS10335	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABK1_RS10390	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABK1_RS10400	COG2353	YceI-like domain
ABK1_RS10410	COG3698	Phosphodiester glycosidase
ABK1_RS10425	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABK1_RS10430	COG0506	proline dehydrogenase activity
ABK1_RS10430	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABK1_RS10430	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABK1_RS10440	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABK1_RS10445	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABK1_RS10465	COG1132	(ABC) transporter
ABK1_RS10470	COG3122	Protein conserved in bacteria
ABK1_RS10475	COG3619	membrane
ABK1_RS10485	COG0640	Transcriptional regulator
ABK1_RS10495	COG2850	peptidyl-arginine hydroxylation
ABK1_RS10500	COG0424	maF-like protein
ABK1_RS10520	COG0191	fructose-bisphosphate aldolase activity
ABK1_RS10525	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABK1_RS10540	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABK1_RS10550	COG1192	Involved in chromosome partitioning
ABK1_RS10555	COG1475	DNA binding
ABK1_RS10560	COG0811	peptide transport
ABK1_RS10570	COG1132	(ABC) transporter
ABK1_RS10575	COG1663	tetraacyldisaccharide 4'-kinase activity
ABK1_RS10595	COG0084	hydrolase, TatD family'
ABK1_RS10660	COG0776	regulation of translation
ABK1_RS10690	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABK1_RS10695	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABK1_RS10740	COG0339	signal peptide processing
ABK1_RS10750	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABK1_RS10785	COG0702	epimerase
ABK1_RS10790	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABK1_RS10810	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABK1_RS10840	COG0316	Belongs to the HesB IscA family
ABK1_RS10845	COG0822	iron-sulfur transferase activity
ABK1_RS10870	COG0776	regulation of translation
ABK1_RS10875	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABK1_RS10880	COG2207	Transcriptional regulator
ABK1_RS10885	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABK1_RS10890	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS10895	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS10910	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABK1_RS10930	COG4264	IucA IucC family
ABK1_RS10935	COG4264	IucA IucC family
ABK1_RS10975	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABK1_RS10990	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABK1_RS11010	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABK1_RS11015	COG0730	response to heat
ABK1_RS11035	COG4773	Receptor
ABK1_RS11040	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABK1_RS11055	COG1131	(ABC) transporter
ABK1_RS11060	COG0842	Transport permease protein
ABK1_RS11065	COG0842	Transport permease protein
ABK1_RS11120	COG2226	methyltransferase
ABK1_RS11145	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABK1_RS11180	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABK1_RS11190	COG0133	tryptophan synthase activity
ABK1_RS11205	COG3706	GGDEF domain
ABK1_RS11220	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABK1_RS11225	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABK1_RS11230	COG0022	dehydrogenase e1 component
ABK1_RS11235	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABK1_RS11240	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABK1_RS11250	COG1063	alcohol dehydrogenase
ABK1_RS11255	COG3781	membrane
ABK1_RS11265	COG3453	Protein conserved in bacteria
ABK1_RS11265	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABK1_RS11275	COG0730	response to heat
ABK1_RS11290	COG2207	Transcriptional regulator
ABK1_RS11290	COG3708	Transcriptional regulator
ABK1_RS11295	COG1733	regulation of RNA biosynthetic process
ABK1_RS11300	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABK1_RS11310	COG2188	Transcriptional regulator
ABK1_RS11325	COG4521	taurine ABC transporter
ABK1_RS11330	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABK1_RS11350	COG0477	Major facilitator Superfamily
ABK1_RS11360	COG1027	Aspartate ammonia-lyase
ABK1_RS11375	COG0583	DNA-binding transcription factor activity
ABK1_RS11380	COG0583	DNA-binding transcription factor activity
ABK1_RS11385	COG0183	Belongs to the thiolase family
ABK1_RS11390	COG2031	fatty acid transporter
ABK1_RS11395	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABK1_RS11405	COG0583	DNA-binding transcription factor activity
ABK1_RS11415	COG2610	gluconate transmembrane transporter activity
ABK1_RS11420	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS11425	COG2207	Transcriptional regulator
ABK1_RS11440	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS11465	COG0543	2 iron, 2 sulfur cluster binding
ABK1_RS11465	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABK1_RS11470	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABK1_RS11475	COG4638	Rieske (2fe-2S)
ABK1_RS11485	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABK1_RS11490	COG4149	molybdate abc transporter
ABK1_RS11495	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABK1_RS11500	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS11505	COG3433	isochorismatase activity
ABK1_RS11505	COG1535	isochorismatase
ABK1_RS11565	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABK1_RS11580	COG0753	catalase activity
ABK1_RS11590	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABK1_RS11635	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABK1_RS11655	COG2072	flavoprotein involved in K transport
ABK1_RS11665	COG1538	Outer membrane efflux protein
ABK1_RS11670	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABK1_RS11675	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABK1_RS11680	COG0745	RESPONSE REGULATOR receiver
ABK1_RS11695	COG2207	Transcriptional regulator
ABK1_RS11710	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS11765	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABK1_RS11895	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABK1_RS11915	COG1120	ATPase activity
ABK1_RS11920	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABK1_RS11930	COG1064	alcohol dehydrogenase
ABK1_RS11945	COG2207	Transcriptional regulator
ABK1_RS11950	COG2084	Dehydrogenase
ABK1_RS11960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABK1_RS11965	COG0583	DNA-binding transcription factor activity
ABK1_RS11975	COG0129	dihydroxy-acid dehydratase activity
ABK1_RS11980	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS11995	COG1566	PFAM secretion protein HlyD family protein
ABK1_RS12015	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABK1_RS12045	COG0583	DNA-binding transcription factor activity
ABK1_RS12060	COG2188	Transcriptional regulator
ABK1_RS12095	COG2831	hemolysin activation secretion protein
ABK1_RS12105	COG1473	amidohydrolase
ABK1_RS12115	COG0475	glutathione-regulated potassium exporter activity
ABK1_RS12115	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABK1_RS12125	COG0583	DNA-binding transcription factor activity
ABK1_RS12130	COG1335	isochorismatase
ABK1_RS12140	COG1309	transcriptional regulator
ABK1_RS12170	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ABK1_RS12180	COG1902	pentaerythritol trinitrate reductase activity
ABK1_RS12180	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABK1_RS12195	COG1846	Transcriptional regulator
ABK1_RS12220	COG0753	catalase activity
ABK1_RS12245	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS12260	COG3162	membrane
ABK1_RS12270	COG3829	transcription factor binding
ABK1_RS12275	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS12280	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS12300	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS12320	COG2186	Transcriptional regulator
ABK1_RS12330	COG0583	DNA-binding transcription factor activity
ABK1_RS12335	COG4948	Mandelate Racemase Muconate Lactonizing
ABK1_RS12340	COG4829	muconolactone delta-isomerase
ABK1_RS12350	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABK1_RS12355	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABK1_RS12360	COG0183	Belongs to the thiolase family
ABK1_RS12365	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABK1_RS12375	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS12395	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABK1_RS12405	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS12415	COG4638	Rieske (2fe-2S)
ABK1_RS12435	COG0154	amidase activity
ABK1_RS12445	COG2814	Major facilitator Superfamily
ABK1_RS12470	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS12475	COG0583	DNA-binding transcription factor activity
ABK1_RS12480	COG1414	Transcriptional regulator
ABK1_RS12495	COG2391	methyltransferase activity
ABK1_RS12505	COG4993	Dehydrogenase
ABK1_RS12510	COG3659	wide pore channel activity
ABK1_RS12515	COG3420	alginic acid biosynthetic process
ABK1_RS12520	COG0710	3-dehydroquinate dehydratase activity
ABK1_RS12525	COG3485	protocatechuate 3,4-dioxygenase
ABK1_RS12530	COG3485	protocatechuate 3,4-dioxygenase
ABK1_RS12535	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABK1_RS12540	COG2271	Major facilitator Superfamily
ABK1_RS12545	COG0596	Alpha beta hydrolase
ABK1_RS12550	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABK1_RS12555	COG0183	Belongs to the thiolase family
ABK1_RS12560	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABK1_RS12565	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABK1_RS12575	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABK1_RS12580	COG2323	membrane
ABK1_RS12625	COG1902	pentaerythritol trinitrate reductase activity
ABK1_RS12625	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABK1_RS12650	COG0542	response to heat
ABK1_RS12655	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABK1_RS12685	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABK1_RS12690	COG0569	domain protein
ABK1_RS12695	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABK1_RS12715	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABK1_RS12725	COG1585	Membrane protein implicated in regulation of membrane protease activity
ABK1_RS12745	COG1294	oxidase, subunit
ABK1_RS12750	COG4890	Cyd operon protein YbgT
ABK1_RS12765	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
ABK1_RS12775	COG0552	protein localization to endoplasmic reticulum
ABK1_RS12800	COG0517	IMP dehydrogenase activity
ABK1_RS12800	COG0516	GMP reductase activity
ABK1_RS12805	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABK1_RS12810	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABK1_RS12820	COG0583	DNA-binding transcription factor activity
ABK1_RS12825	COG0024	Methionine aminopeptidase
ABK1_RS12855	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABK1_RS12855	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABK1_RS12860	COG1105	Belongs to the carbohydrate kinase PfkB family
ABK1_RS12865	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABK1_RS12865	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABK1_RS12865	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ABK1_RS12890	COG3300	MHYT domain
ABK1_RS12890	COG5001	Diguanylate cyclase
ABK1_RS12905	COG2135	peptidase activity
ABK1_RS12910	COG0659	secondary active sulfate transmembrane transporter activity
ABK1_RS12925	COG1113	amino acid transport
ABK1_RS12935	COG1522	sequence-specific DNA binding
ABK1_RS12960	COG1011	Hydrolase
ABK1_RS12965	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABK1_RS12975	COG2137	regulation of response to DNA damage stimulus
ABK1_RS12985	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABK1_RS13020	COG0575	Belongs to the CDS family
ABK1_RS13025	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABK1_RS13045	COG3852	Histidine kinase
ABK1_RS13050	COG2204	response regulator
ABK1_RS13110	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABK1_RS13115	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABK1_RS13135	COG0697	spore germination
ABK1_RS13140	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABK1_RS13150	COG0303	'Molybdopterin
ABK1_RS13155	COG0315	cyclic pyranopterin monophosphate synthase activity
ABK1_RS13155	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABK1_RS13170	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABK1_RS13175	COG0243	molybdopterin cofactor binding
ABK1_RS13185	COG0243	molybdopterin cofactor binding
ABK1_RS13190	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABK1_RS13195	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABK1_RS13195	COG2146	nitrite reductase [NAD(P)H] activity
ABK1_RS13205	COG0745	RESPONSE REGULATOR receiver
ABK1_RS13210	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABK1_RS13210	COG1116	anion transmembrane transporter activity
ABK1_RS13225	COG0511	ligase activity, forming carbon-carbon bonds
ABK1_RS13240	COG2814	Major facilitator Superfamily
ABK1_RS13245	COG2194	sulfuric ester hydrolase activity
ABK1_RS13320	COG0739	heme binding
ABK1_RS13320	COG0741	lytic transglycosylase activity
ABK1_RS13320	COG1196	nuclear chromosome segregation
ABK1_RS13335	COG1598	PFAM Uncharacterised protein family UPF0150
ABK1_RS13425	COG5410	chromosome segregation
ABK1_RS13570	COG0512	Glutamine amidotransferase of anthranilate synthase
ABK1_RS13575	COG0308	aminopeptidase N
ABK1_RS13605	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABK1_RS13615	COG0302	gtp cyclohydrolase
ABK1_RS13645	COG3739	integral membrane protein
ABK1_RS13660	COG1169	isochorismate synthase
ABK1_RS13670	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ABK1_RS13675	COG1132	(ABC) transporter
ABK1_RS13680	COG1132	(ABC) transporter
ABK1_RS13700	COG1535	isochorismatase
ABK1_RS13700	COG3433	isochorismatase activity
ABK1_RS13705	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABK1_RS13710	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABK1_RS13720	COG4774	siderophore transport
ABK1_RS13725	COG4607	ABC-type enterochelin transport system periplasmic component
ABK1_RS13730	COG4604	ABC transporter, ATP-binding protein
ABK1_RS13735	COG4605	iron ion homeostasis
ABK1_RS13740	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABK1_RS13745	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABK1_RS13760	COG2964	Protein conserved in bacteria
ABK1_RS13770	COG1741	Belongs to the pirin family
ABK1_RS13785	COG1309	transcriptional regulator
ABK1_RS13795	COG4948	Mandelate Racemase Muconate Lactonizing
ABK1_RS13835	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABK1_RS13835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABK1_RS13840	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABK1_RS13845	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS13870	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABK1_RS13875	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABK1_RS13885	COG1113	amino acid transport
ABK1_RS13905	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ABK1_RS13905	COG2508	Transcriptional regulator
ABK1_RS13935	COG2879	small protein
ABK1_RS13940	COG1966	Carbon starvation protein
ABK1_RS13985	COG1067	ATP-dependent peptidase activity
ABK1_RS13990	COG0583	DNA-binding transcription factor activity
ABK1_RS14015	COG1686	Belongs to the peptidase S11 family
ABK1_RS14020	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABK1_RS14055	COG0616	signal peptide processing
ABK1_RS14060	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABK1_RS14070	COG0573	inorganic phosphate transmembrane transporter activity
ABK1_RS14075	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABK1_RS14085	COG1113	amino acid transport
ABK1_RS14090	COG3961	Belongs to the TPP enzyme family
ABK1_RS14095	COG1522	sequence-specific DNA binding
ABK1_RS14105	COG0076	glutamate decarboxylase activity
ABK1_RS14110	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABK1_RS14120	COG1309	transcriptional regulator
ABK1_RS14135	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABK1_RS14170	COG0352	thiamine-phosphate diphosphorylase activity
ABK1_RS14195	COG0612	Peptidase, M16
ABK1_RS14205	COG1823	symporter activity
ABK1_RS14210	COG0583	DNA-binding transcription factor activity
ABK1_RS14215	COG0477	Major facilitator Superfamily
ABK1_RS14235	COG1187	pseudouridine synthase activity
ABK1_RS14250	COG1686	Belongs to the peptidase S11 family
ABK1_RS14255	COG1252	NADH dehydrogenase
ABK1_RS14265	COG0415	Belongs to the DNA photolyase family
ABK1_RS14280	COG1215	transferase activity, transferring glycosyl groups
ABK1_RS14310	COG2070	2-Nitropropane dioxygenase
ABK1_RS14375	COG0556	nucleotide-excision repair
ABK1_RS14395	COG0436	Aminotransferase
ABK1_RS14420	COG4221	oxidoreductase activity
ABK1_RS14430	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABK1_RS14435	COG1381	Involved in DNA repair and RecF pathway recombination
ABK1_RS14445	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABK1_RS14460	COG0681	Belongs to the peptidase S26 family
ABK1_RS14475	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABK1_RS14495	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABK1_RS14500	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABK1_RS14505	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABK1_RS14515	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABK1_RS14520	COG4208	sulfate ABC transporter
ABK1_RS14525	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABK1_RS14530	COG0583	DNA-binding transcription factor activity
ABK1_RS14535	COG4625	pathogenesis
ABK1_RS14550	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABK1_RS14565	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABK1_RS14575	COG1051	belongs to the nudix hydrolase family
ABK1_RS14575	COG1056	cytidyltransferase-related domain
ABK1_RS14580	COG1024	Enoyl-CoA hydratase
ABK1_RS14595	COG2814	Major facilitator Superfamily
ABK1_RS14600	COG0047	phosphoribosylformylglycinamidine synthase activity
ABK1_RS14600	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABK1_RS14620	COG1473	amidohydrolase
ABK1_RS14625	COG0824	Thioesterase
ABK1_RS14645	COG0823	Involved in the tonB-independent uptake of proteins
ABK1_RS14665	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABK1_RS14710	COG0628	permease
ABK1_RS14720	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABK1_RS14725	COG0596	Alpha beta hydrolase
ABK1_RS14730	COG0616	signal peptide processing
ABK1_RS14730	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABK1_RS14740	COG2333	competence protein COMEC
ABK1_RS14740	COG0658	competence protein
ABK1_RS14745	COG1136	(ABC) transporter
ABK1_RS14750	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABK1_RS14780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABK1_RS14800	COG0463	Glycosyl transferase, family 2
ABK1_RS14830	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABK1_RS14835	COG1280	lysine exporter protein (LysE YggA)
ABK1_RS14845	COG0019	diaminopimelate decarboxylase activity
ABK1_RS14855	COG1113	amino acid transport
ABK1_RS14870	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABK1_RS14880	COG3339	Conserved Protein
ABK1_RS14885	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABK1_RS14890	COG0243	molybdopterin cofactor binding
ABK1_RS14910	COG0778	Nitroreductase
ABK1_RS14935	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABK1_RS14950	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABK1_RS14970	COG0741	lytic transglycosylase activity
ABK1_RS14990	COG0584	glycerophosphoryl diester phosphodiesterase
ABK1_RS14995	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABK1_RS15020	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABK1_RS15025	COG1597	lipid kinase activity
ABK1_RS15040	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABK1_RS15045	COG0477	Major facilitator Superfamily
ABK1_RS15095	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABK1_RS15100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABK1_RS15125	COG0505	Belongs to the CarA family
ABK1_RS15145	COG0589	response to stress
ABK1_RS15160	COG2843	Capsule synthesis protein
ABK1_RS15220	COG2321	neutral zinc metallopeptidase
ABK1_RS15225	COG2354	Protein conserved in bacteria
ABK1_RS15245	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABK1_RS15260	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABK1_RS15265	COG1053	succinate dehydrogenase
ABK1_RS15270	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABK1_RS15275	COG2009	succinate dehydrogenase
ABK1_RS15315	COG2921	Belongs to the UPF0250 family
ABK1_RS15320	COG0321	lipoyl(octanoyl) transferase activity
ABK1_RS15335	COG0531	amino acid
ABK1_RS15345	COG1733	regulation of RNA biosynthetic process
ABK1_RS15350	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABK1_RS15355	COG1648	precorrin-2 dehydrogenase activity
ABK1_RS15355	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABK1_RS15370	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABK1_RS15400	COG0671	phosphoesterase, PA-phosphatase related
ABK1_RS15405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABK1_RS15415	COG1538	Outer membrane efflux protein
ABK1_RS15420	COG0393	Putative heavy-metal-binding
ABK1_RS15425	COG0393	Putative heavy-metal-binding
ABK1_RS15435	COG1028	Short-chain dehydrogenase reductase Sdr
ABK1_RS15445	COG0525	valine-tRNA ligase activity
ABK1_RS15465	COG0583	DNA-binding transcription factor activity
ABK1_RS15470	COG0004	ammonium transporteR
ABK1_RS15480	COG0642	Histidine kinase
ABK1_RS15485	COG0745	RESPONSE REGULATOR receiver
ABK1_RS15490	COG2194	sulfuric ester hydrolase activity
ABK1_RS15510	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABK1_RS15525	COG2315	Protein conserved in bacteria
ABK1_RS15530	COG0142	geranyltranstransferase activity
ABK1_RS15535	COG2828	Protein conserved in bacteria
ABK1_RS15540	COG1113	amino acid transport
ABK1_RS15560	COG2207	Transcriptional regulator
ABK1_RS15585	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABK1_RS15595	COG0560	Phosphoserine phosphatase
ABK1_RS15605	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABK1_RS15615	COG1530	ribonuclease E activity
ABK1_RS15620	COG0424	maF-like protein
ABK1_RS15625	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABK1_RS15630	COG1792	Involved in formation and maintenance of cell shape
ABK1_RS15635	COG1077	Cell shape determining protein MreB Mrl
ABK1_RS15640	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABK1_RS15650	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABK1_RS15680	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ABK1_RS15685	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABK1_RS15690	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABK1_RS15695	COG1115	amino acid carrier protein
ABK1_RS15710	COG2814	Major facilitator Superfamily
ABK1_RS15715	COG1289	transmembrane transporter activity
ABK1_RS15725	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ABK1_RS15755	COG1376	ErfK ybiS ycfS ynhG family protein
ABK1_RS15760	COG2832	Protein of unknown function (DUF454)
ABK1_RS15770	COG5510	response to toxic substance
ABK1_RS15790	COG0840	transmembrane signaling receptor activity
ABK1_RS15830	COG3422	double-strand break repair
ABK1_RS15835	COG2824	Alkylphosphonate utilization operon protein PhnA
ABK1_RS15840	COG3189	MarR family transcriptional regulator
ABK1_RS15850	COG0354	folic acid binding
ABK1_RS15855	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABK1_RS15870	COG1902	pentaerythritol trinitrate reductase activity
ABK1_RS15875	COG4772	TonB-dependent receptor
ABK1_RS15880	COG2094	Belongs to the DNA glycosylase MPG family
ABK1_RS15905	COG1217	gtp-binding protein TYPA
ABK1_RS15910	COG2233	PERMEase
ABK1_RS15920	COG0833	amino acid
ABK1_RS15925	COG1690	Belongs to the RtcB family
ABK1_RS15935	COG2885	chlorophyll binding
ABK1_RS15935	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABK1_RS15945	COG0183	Belongs to the thiolase family
ABK1_RS15965	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABK1_RS15985	COG2207	Transcriptional regulator
ABK1_RS15990	COG0183	Belongs to the thiolase family
ABK1_RS16020	COG1272	protein, Hemolysin III
ABK1_RS16025	COG0477	Major facilitator Superfamily
ABK1_RS16040	COG0450	alkyl hydroperoxide reductase
ABK1_RS16060	COG0285	dihydrofolate synthase activity
ABK1_RS16110	COG2096	Adenosyltransferase
ABK1_RS16130	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABK1_RS16135	COG0745	RESPONSE REGULATOR receiver
ABK1_RS16140	COG2205	protein histidine kinase activity
ABK1_RS16150	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS16155	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS16160	COG0583	DNA-binding transcription factor activity
ABK1_RS16165	COG0625	glutathione transferase activity
ABK1_RS16230	COG0438	transferase activity, transferring glycosyl groups
ABK1_RS16235	COG0463	Glycosyl transferase, family 2
ABK1_RS16240	COG0726	polysaccharide deacetylase
ABK1_RS16260	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABK1_RS16265	COG2205	protein histidine kinase activity
ABK1_RS16310	COG1862	Preprotein translocase
ABK1_RS16320	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABK1_RS16325	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABK1_RS16335	COG3781	membrane
ABK1_RS16340	COG0613	PHP domain protein
ABK1_RS16350	COG2350	Protein conserved in bacteria
ABK1_RS16380	COG1607	acyl-coa hydrolase
ABK1_RS16440	COG2199	diguanylate cyclase activity
ABK1_RS16450	COG1408	metallophosphoesterase
ABK1_RS16455	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABK1_RS16465	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABK1_RS16485	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABK1_RS16490	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABK1_RS16505	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABK1_RS16515	COG2969	positive regulation of protein catabolic process
ABK1_RS16535	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS16540	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABK1_RS16555	COG1309	transcriptional regulator
ABK1_RS16560	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS16605	COG1183	phosphatidylcholine synthase activity
ABK1_RS16610	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABK1_RS16640	COG0739	heme binding
ABK1_RS16640	COG1196	nuclear chromosome segregation
ABK1_RS16640	COG0741	lytic transglycosylase activity
ABK1_RS16650	COG1702	phosphate starvation-inducible protein PhoH
ABK1_RS16685	COG1295	ribonuclease BN
ABK1_RS16690	COG0697	spore germination
ABK1_RS16695	COG2169	Transcriptional regulator
ABK1_RS16700	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABK1_RS16745	COG0557	exoribonuclease II activity
ABK1_RS16750	COG0339	signal peptide processing
ABK1_RS16755	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ABK1_RS16785	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABK1_RS16790	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS16945	COG0626	cystathionine gamma-synthase activity
ABK1_RS16950	COG0433	COG0433 Predicted ATPase
ABK1_RS16955	COG1017	nitric oxide dioxygenase activity
ABK1_RS16955	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABK1_RS16960	COG1959	2 iron, 2 sulfur cluster binding
ABK1_RS16975	COG1301	dicarboxylic acid transport
ABK1_RS16980	COG1946	Acyl-CoA thioesterase
ABK1_RS17000	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABK1_RS17005	COG1040	competence protein
ABK1_RS17010	COG0494	nUDIX hydrolase
ABK1_RS17020	COG0598	Magnesium transport protein CorA
ABK1_RS17030	COG2854	intermembrane phospholipid transfer
ABK1_RS17040	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABK1_RS17045	COG1127	ABC transporter
ABK1_RS17055	COG0513	Belongs to the DEAD box helicase family
ABK1_RS17075	COG0408	coproporphyrinogen oxidase activity
ABK1_RS17090	COG1960	acyl-CoA dehydrogenase activity
ABK1_RS17100	COG1983	PspC domain protein
ABK1_RS17105	COG0517	IMP dehydrogenase activity
ABK1_RS17150	COG0583	DNA-binding transcription factor activity
ABK1_RS17190	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS17200	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABK1_RS17205	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABK1_RS17210	COG0833	amino acid
ABK1_RS17240	COG1192	Involved in chromosome partitioning
ABK1_RS17245	COG0628	permease
ABK1_RS17255	COG1289	transmembrane transporter activity
ABK1_RS17270	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABK1_RS17275	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ABK1_RS17285	COG0277	FAD linked oxidase domain protein
ABK1_RS17290	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABK1_RS17315	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABK1_RS17320	COG5380	lipid catabolic process
ABK1_RS17340	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABK1_RS17390	COG0194	GDP metabolic process
ABK1_RS17400	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABK1_RS17420	COG3307	-O-antigen
ABK1_RS17450	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABK1_RS17455	COG1704	LemA family
ABK1_RS17465	COG0493	'glutamate synthase
ABK1_RS17470	COG0070	glutamate synthase
ABK1_RS17470	COG0069	glutamate synthase activity
ABK1_RS17470	COG0067	glutamate synthase
ABK1_RS17520	COG2226	methyltransferase
ABK1_RS17535	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABK1_RS17540	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABK1_RS17585	COG0833	amino acid
ABK1_RS17650	COG0488	(ABC) transporter
ABK1_RS17655	COG2873	o-acetylhomoserine
ABK1_RS17660	COG4221	oxidoreductase activity
ABK1_RS17665	COG0659	secondary active sulfate transmembrane transporter activity
ABK1_RS17685	COG0427	acetyl-CoA hydrolase
ABK1_RS17715	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABK1_RS17755	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABK1_RS17810	COG2207	Transcriptional regulator
ABK1_RS17815	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
ABK1_RS17830	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABK1_RS17835	COG1733	regulation of RNA biosynthetic process
ABK1_RS17860	COG1733	regulation of RNA biosynthetic process
ABK1_RS17880	COG0667	Aldo Keto reductase
ABK1_RS17905	COG0583	DNA-binding transcription factor activity
ABK1_RS17910	COG2814	Major facilitator Superfamily
ABK1_RS17940	COG1335	isochorismatase
ABK1_RS17950	COG1012	belongs to the aldehyde dehydrogenase family
ABK1_RS17955	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABK1_RS17965	COG1113	amino acid transport
ABK1_RS17975	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABK1_RS17990	COG2814	Major facilitator Superfamily
ABK1_RS18000	COG0352	thiamine-phosphate diphosphorylase activity
ABK1_RS18000	COG0351	phosphomethylpyrimidine kinase
ABK1_RS18000	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABK1_RS18020	COG1309	transcriptional regulator
ABK1_RS18025	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABK1_RS18040	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABK1_RS18050	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABK1_RS18055	COG3162	membrane
ABK1_RS18060	COG2205	protein histidine kinase activity
ABK1_RS18060	COG2198	Histidine kinase
ABK1_RS18060	COG0784	Response regulator, receiver
ABK1_RS18085	COG1522	sequence-specific DNA binding
ABK1_RS18090	COG1335	isochorismatase
ABK1_RS18095	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABK1_RS18105	COG0668	transmembrane transport
ABK1_RS18110	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABK1_RS18115	COG1519	Transferase
ABK1_RS18120	COG1902	pentaerythritol trinitrate reductase activity
ABK1_RS18140	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABK1_RS18165	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABK1_RS18165	COG0426	domain, Protein
ABK1_RS18170	COG4774	siderophore transport
ABK1_RS18185	COG2119	membrane
ABK1_RS18195	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABK1_RS18205	COG4942	peptidase
ABK1_RS18220	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABK1_RS18230	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABK1_RS18250	COG0189	ligase activity
ABK1_RS18270	COG0708	Exodeoxyribonuclease III
ABK1_RS18275	COG1393	Belongs to the ArsC family
ABK1_RS18330	COG2233	PERMEase
ABK1_RS18340	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABK1_RS18350	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABK1_RS18360	COG3150	esterase
ABK1_RS18385	COG3179	chitinase
ABK1_RS18400	COG2918	glutathione biosynthetic process
ABK1_RS18415	COG2733	membrane
ABK1_RS18420	COG0436	Aminotransferase
ABK1_RS18425	COG0534	Mate efflux family protein
ABK1_RS18490	COG0753	catalase activity
ABK1_RS18535	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABK1_RS18540	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABK1_RS18550	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABK1_RS18555	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABK1_RS18560	COG0546	phosphoglycolate phosphatase activity
ABK1_RS18570	COG0010	Belongs to the arginase family
ABK1_RS18600	COG2188	Transcriptional regulator
ABK1_RS18610	COG0523	cobalamin synthesis protein
ABK1_RS18620	COG1113	amino acid transport
ABK1_RS18630	COG0625	glutathione transferase activity
ABK1_RS18650	COG1683	Conserved Protein
ABK1_RS18655	COG0534	Mate efflux family protein
ABK1_RS18660	COG0385	Bile acid
ABK1_RS18665	COG1335	isochorismatase
ABK1_RS18670	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABK1_RS18695	COG2116	formate transmembrane transporter activity
ABK1_RS18700	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABK1_RS18705	COG2133	pyrroloquinoline quinone binding
ABK1_RS18710	COG2983	Belongs to the UPF0260 family
ABK1_RS18745	COG2818	Glycosylase
ABK1_RS18750	COG1064	alcohol dehydrogenase
ABK1_RS18755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABK1_RS18765	COG0583	DNA-binding transcription factor activity
ABK1_RS18770	COG0656	L-ascorbic acid biosynthetic process
ABK1_RS18775	COG2814	Major facilitator Superfamily
ABK1_RS18810	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABK1_RS18825	COG2233	PERMEase
ABK1_RS18865	COG0733	neurotransmitter:sodium symporter activity
ABK1_RS18920	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABK1_RS18990	COG0488	(ABC) transporter