locus-tag class description M1S54_RS00005 PF00308 Bacterial dnaA protein M1S54_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S54_RS00005 PF11638 DnaA N-terminal domain M1S54_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S54_RS00010 PF02767 DNA polymerase III beta subunit, central domain M1S54_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S54_RS00015 PF02463 RecF/RecN/SMC N terminal domain M1S54_RS00020 PF00204 DNA gyrase B M1S54_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S54_RS00020 PF18053 DNA gyrase B subunit insert domain M1S54_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS00020 PF01751 Toprim domain M1S54_RS00030 PF09335 SNARE associated Golgi protein M1S54_RS00035 PF00005 ABC transporter M1S54_RS00035 PF12848 ABC transporter M1S54_RS00055 PF01521 Iron-sulphur cluster biosynthesis M1S54_RS00060 PF00561 alpha/beta hydrolase fold M1S54_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S54_RS00070 PF00579 tRNA synthetases class I (W and Y) M1S54_RS00110 PF00209 Sodium:neurotransmitter symporter family M1S54_RS00120 PF01189 16S rRNA methyltransferase RsmB/F M1S54_RS00120 PF01029 NusB family M1S54_RS00125 PF02911 Formyl transferase, C-terminal domain M1S54_RS00125 PF00551 Formyl transferase M1S54_RS00130 PF00920 Dehydratase family M1S54_RS00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS00145 PF03466 LysR substrate binding domain M1S54_RS00150 PF00860 Permease family M1S54_RS00155 PF00311 Phosphoenolpyruvate carboxylase M1S54_RS00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S54_RS00160 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S54_RS00170 PF00873 AcrB/AcrD/AcrF family M1S54_RS00180 PF00684 DnaJ central domain M1S54_RS00180 PF01556 DnaJ C terminal domain M1S54_RS00180 PF00226 DnaJ domain M1S54_RS00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S54_RS00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S54_RS00200 PF07690 Major Facilitator Superfamily M1S54_RS00205 PF00248 Aldo/keto reductase family M1S54_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS00210 PF03466 LysR substrate binding domain M1S54_RS00225 PF00155 Aminotransferase class I and II M1S54_RS00225 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS00230 PF00107 Zinc-binding dehydrogenase M1S54_RS00235 PF03352 Methyladenine glycosylase M1S54_RS00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S54_RS00250 PF00633 Helix-hairpin-helix motif M1S54_RS00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S54_RS00250 PF14815 NUDIX domain M1S54_RS00265 PF07043 Protein of unknown function (DUF1328) M1S54_RS00270 PF03692 Putative zinc- or iron-chelating domain M1S54_RS00275 PF07995 Glucose / Sorbosone dehydrogenase M1S54_RS00280 PF12002 MgsA AAA+ ATPase C terminal M1S54_RS00280 PF16193 AAA C-terminal domain M1S54_RS00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S54_RS00285 PF01226 Formate/nitrite transporter M1S54_RS00295 PF01259 SAICAR synthetase M1S54_RS00305 PF00701 Dihydrodipicolinate synthetase family M1S54_RS00310 PF00857 Isochorismatase family M1S54_RS00315 PF01758 Sodium Bile acid symporter family M1S54_RS00320 PF01554 MatE M1S54_RS00325 PF04463 Protein of unknown function (DUF523) M1S54_RS00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S54_RS00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S54_RS00345 PF02798 Glutathione S-transferase, N-terminal domain M1S54_RS00345 PF14497 Glutathione S-transferase, C-terminal domain M1S54_RS00355 PF00324 Amino acid permease M1S54_RS00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S54_RS00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S54_RS00375 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS00375 PF07702 UTRA domain M1S54_RS00380 PF05962 HutD M1S54_RS00385 PF01175 Urocanase Rossmann-like domain M1S54_RS00385 PF17392 Urocanase C-terminal domain M1S54_RS00385 PF17391 Urocanase N-terminal domain M1S54_RS00390 PF00221 Aromatic amino acid lyase M1S54_RS00395 PF00324 Amino acid permease M1S54_RS00400 PF01979 Amidohydrolase family M1S54_RS00405 PF00491 Arginase family M1S54_RS00420 PF01177 Asp/Glu/Hydantoin racemase M1S54_RS00425 PF01380 SIS domain M1S54_RS00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S54_RS00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS00430 PF12804 MobA-like NTP transferase domain M1S54_RS00435 PF04608 Phosphatidylglycerophosphatase A M1S54_RS00440 PF02769 AIR synthase related protein, C-terminal domain M1S54_RS00440 PF00586 AIR synthase related protein, N-terminal domain M1S54_RS00445 PF01029 NusB family M1S54_RS00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S54_RS00455 PF00925 GTP cyclohydrolase II M1S54_RS00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S54_RS00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S54_RS00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S54_RS00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S54_RS00490 PF00581 Rhodanese-like domain M1S54_RS00495 PF02666 Phosphatidylserine decarboxylase M1S54_RS00500 PF03069 Acetamidase/Formamidase family M1S54_RS00520 PF11808 Phosphate regulon sensor protein PhoR M1S54_RS00520 PF00989 PAS fold M1S54_RS00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS00520 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS00525 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS00525 PF00072 Response regulator receiver domain M1S54_RS00535 PF00106 short chain dehydrogenase M1S54_RS00540 PF01554 MatE M1S54_RS00545 PF00155 Aminotransferase class I and II M1S54_RS00550 PF04286 Protein of unknown function (DUF445) M1S54_RS00565 PF04262 Glutamate-cysteine ligase M1S54_RS00570 PF02600 Disulfide bond formation protein DsbB M1S54_RS00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S54_RS00575 PF04717 Type VI secretion system, phage-baseplate injector M1S54_RS00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S54_RS00580 PF00877 NlpC/P60 family M1S54_RS00580 PF01476 LysM domain M1S54_RS00595 PF05728 Uncharacterised protein family (UPF0227) M1S54_RS00600 PF00204 DNA gyrase B M1S54_RS00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S54_RS00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS00600 PF01751 Toprim domain M1S54_RS00605 PF00106 short chain dehydrogenase M1S54_RS00610 PF04115 Ureidoglycolate lyase M1S54_RS00615 PF03561 Allantoicase repeat M1S54_RS00620 PF01494 FAD binding domain M1S54_RS00630 PF00860 Permease family M1S54_RS00635 PF00576 HIUase/Transthyretin family M1S54_RS00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S54_RS00665 PF11412 Disulphide bond corrector protein DsbC M1S54_RS00670 PF07694 5TMR of 5TMR-LYT M1S54_RS00670 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS00675 PF07859 alpha/beta hydrolase fold M1S54_RS00685 PF03960 ArsC family M1S54_RS00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S54_RS00695 PF00156 Phosphoribosyl transferase domain M1S54_RS00700 PF00593 TonB dependent receptor M1S54_RS00700 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S54_RS00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S54_RS00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S54_RS00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S54_RS00720 PF08245 Mur ligase middle domain M1S54_RS00720 PF01225 Mur ligase family, catalytic domain M1S54_RS00720 PF02875 Mur ligase family, glutamate ligase domain M1S54_RS00725 PF01820 D-ala D-ala ligase N-terminus M1S54_RS00725 PF07478 D-ala D-ala ligase C-terminus M1S54_RS00730 PF08478 POTRA domain, FtsQ-type M1S54_RS00730 PF03799 Cell division protein FtsQ M1S54_RS00735 PF02491 SHS2 domain inserted in FTSA M1S54_RS00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S54_RS00740 PF12327 FtsZ family, C-terminal domain M1S54_RS00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S54_RS00755 PF01551 Peptidase family M23 M1S54_RS00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S54_RS00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S54_RS00765 PF02817 e3 binding domain M1S54_RS00765 PF00364 Biotin-requiring enzyme M1S54_RS00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S54_RS00775 PF01169 Uncharacterized protein family UPF0016 M1S54_RS00780 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS00780 PF00593 TonB dependent receptor M1S54_RS00785 PF00258 Flavodoxin M1S54_RS00785 PF01613 Flavin reductase like domain M1S54_RS00790 PF03692 Putative zinc- or iron-chelating domain M1S54_RS00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S54_RS00795 PF00571 CBS domain M1S54_RS00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S54_RS00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S54_RS00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S54_RS00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S54_RS00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S54_RS00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S54_RS00810 PF02272 DHHA1 domain M1S54_RS00810 PF17768 RecJ OB domain M1S54_RS00810 PF01368 DHH family M1S54_RS00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S54_RS00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S54_RS00840 PF04452 RNA methyltransferase M1S54_RS00845 PF00924 Mechanosensitive ion channel M1S54_RS00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S54_RS00855 PF00501 AMP-binding enzyme M1S54_RS00855 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS00860 PF00857 Isochorismatase family M1S54_RS00865 PF01037 Lrp/AsnC ligand binding domain M1S54_RS00870 PF00872 Transposase, Mutator family M1S54_RS00875 PF00296 Luciferase-like monooxygenase M1S54_RS00880 PF03358 NADPH-dependent FMN reductase M1S54_RS00885 PF00196 Bacterial regulatory proteins, luxR family M1S54_RS00885 PF00072 Response regulator receiver domain M1S54_RS00895 PF00672 HAMP domain M1S54_RS00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS00895 PF01627 Hpt domain M1S54_RS00895 PF00072 Response regulator receiver domain M1S54_RS00895 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS00900 PF04341 Protein of unknown function, DUF485 M1S54_RS00905 PF00474 Sodium:solute symporter family M1S54_RS00915 PF02028 BCCT, betaine/carnitine/choline family transporter M1S54_RS00925 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS00935 PF17760 UvrA interaction domain M1S54_RS00935 PF17755 UvrA DNA-binding domain M1S54_RS00935 PF00005 ABC transporter M1S54_RS00940 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS00940 PF16925 Tetracyclin repressor-like, C-terminal domain M1S54_RS00945 PF00107 Zinc-binding dehydrogenase M1S54_RS00945 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS00960 PF06942 GlpM protein M1S54_RS00965 PF03070 TENA/THI-4/PQQC family M1S54_RS00965 PF02581 Thiamine monophosphate synthase M1S54_RS00965 PF08543 Phosphomethylpyrimidine kinase M1S54_RS00975 PF07690 Major Facilitator Superfamily M1S54_RS00980 PF00436 Single-strand binding protein family M1S54_RS00990 PF03591 AzlC protein M1S54_RS01000 PF00324 Amino acid permease M1S54_RS01005 PF00155 Aminotransferase class I and II M1S54_RS01005 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS01010 PF00202 Aminotransferase class-III M1S54_RS01015 PF00171 Aldehyde dehydrogenase family M1S54_RS01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS01025 PF00857 Isochorismatase family M1S54_RS01030 PF02678 Pirin M1S54_RS01030 PF05726 Pirin C-terminal cupin domain M1S54_RS01035 PF01593 Flavin containing amine oxidoreductase M1S54_RS01055 PF07690 Major Facilitator Superfamily M1S54_RS01060 PF03466 LysR substrate binding domain M1S54_RS01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS01080 PF00248 Aldo/keto reductase family M1S54_RS01085 PF02311 AraC-like ligand binding domain M1S54_RS01085 PF12833 Helix-turn-helix domain M1S54_RS01115 PF01638 HxlR-like helix-turn-helix M1S54_RS01120 PF02525 Flavodoxin-like fold M1S54_RS01140 PF02705 K+ potassium transporter M1S54_RS01165 PF00230 Major intrinsic protein M1S54_RS01180 PF00977 Histidine biosynthesis protein M1S54_RS01185 PF01636 Phosphotransferase enzyme family M1S54_RS01200 PF03992 Antibiotic biosynthesis monooxygenase M1S54_RS01215 PF00977 Histidine biosynthesis protein M1S54_RS01230 PF00117 Glutamine amidotransferase class-I M1S54_RS01235 PF00475 Imidazoleglycerol-phosphate dehydratase M1S54_RS01255 PF00583 Acetyltransferase (GNAT) family M1S54_RS01260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S54_RS01260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S54_RS01270 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS01270 PF00672 HAMP domain M1S54_RS01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS01275 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS01275 PF00072 Response regulator receiver domain M1S54_RS01280 PF16921 Tex protein YqgF-like domain M1S54_RS01280 PF09371 Tex-like protein N-terminal domain M1S54_RS01280 PF00575 S1 RNA binding domain M1S54_RS01280 PF17674 HHH domain M1S54_RS01285 PF00916 Sulfate permease family M1S54_RS01285 PF01740 STAS domain M1S54_RS01290 PF00106 short chain dehydrogenase M1S54_RS01295 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S54_RS01300 PF12848 ABC transporter M1S54_RS01300 PF00005 ABC transporter M1S54_RS01325 PF04191 Phospholipid methyltransferase M1S54_RS01345 PF00529 HlyD membrane-fusion protein of T1SS M1S54_RS01345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S54_RS01350 PF00873 AcrB/AcrD/AcrF family M1S54_RS01355 PF01545 Cation efflux family M1S54_RS01385 PF00324 Amino acid permease M1S54_RS01400 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S54_RS01415 PF01795 MraW methylase family M1S54_RS01425 PF03717 Penicillin-binding Protein dimerisation domain M1S54_RS01425 PF00905 Penicillin binding protein transpeptidase domain M1S54_RS01430 PF01225 Mur ligase family, catalytic domain M1S54_RS01430 PF02875 Mur ligase family, glutamate ligase domain M1S54_RS01430 PF08245 Mur ligase middle domain M1S54_RS01435 PF01225 Mur ligase family, catalytic domain M1S54_RS01435 PF02875 Mur ligase family, glutamate ligase domain M1S54_RS01435 PF08245 Mur ligase middle domain M1S54_RS01440 PF00953 Glycosyl transferase family 4 M1S54_RS01450 PF13847 Methyltransferase domain M1S54_RS01455 PF17092 Penicillin-binding protein OB-like domain M1S54_RS01455 PF00912 Transglycosylase M1S54_RS01455 PF00905 Penicillin binding protein transpeptidase domain M1S54_RS01460 PF11104 Type IV pilus assembly protein PilM; M1S54_RS01465 PF05137 Fimbrial assembly protein (PilN) M1S54_RS01470 PF04350 Pilus assembly protein, PilO M1S54_RS01480 PF07660 Secretin and TonB N terminus short domain M1S54_RS01480 PF03958 Bacterial type II/III secretion system short domain M1S54_RS01480 PF00263 Bacterial type II and III secretion system protein M1S54_RS01480 PF11741 AMIN domain M1S54_RS01485 PF01202 Shikimate kinase M1S54_RS01490 PF01761 3-dehydroquinate synthase M1S54_RS01500 PF04898 Glutamate synthase central domain M1S54_RS01500 PF00310 Glutamine amidotransferases class-II M1S54_RS01500 PF01493 GXGXG motif M1S54_RS01500 PF01645 Conserved region in glutamate synthase M1S54_RS01505 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS01505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S54_RS01515 PF04011 LemA family M1S54_RS01520 PF04536 TPM domain M1S54_RS01530 PF07963 Prokaryotic N-terminal methylation motif M1S54_RS01530 PF00114 Pilin (bacterial filament) M1S54_RS01540 PF15864 Protein glycosylation ligase M1S54_RS01540 PF04932 O-Antigen ligase M1S54_RS01540 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S54_RS01550 PF00210 Ferritin-like domain M1S54_RS01555 PF04324 BFD-like [2Fe-2S] binding domain M1S54_RS01560 PF01042 Endoribonuclease L-PSP M1S54_RS01565 PF02824 TGS domain M1S54_RS01565 PF13291 ACT domain M1S54_RS01565 PF04607 Region found in RelA / SpoT proteins M1S54_RS01575 PF01192 RNA polymerase Rpb6 M1S54_RS01580 PF00625 Guanylate kinase M1S54_RS01585 PF02401 LytB protein M1S54_RS01625 PF00886 Ribosomal protein S16 M1S54_RS01630 PF05239 PRC-barrel domain M1S54_RS01630 PF01782 RimM N-terminal domain M1S54_RS01635 PF01746 tRNA (Guanine-1)-methyltransferase M1S54_RS01640 PF01245 Ribosomal protein L19 M1S54_RS01645 PF00561 alpha/beta hydrolase fold M1S54_RS01650 PF03280 Proteobacterial lipase chaperone protein M1S54_RS01655 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S54_RS01655 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S54_RS01655 PF09157 Pseudouridine synthase II TruB, C-terminal M1S54_RS01660 PF01925 Sulfite exporter TauE/SafE M1S54_RS01670 PF00892 EamA-like transporter family M1S54_RS01675 PF00892 EamA-like transporter family M1S54_RS01680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S54_RS01680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S54_RS01685 PF02913 FAD linked oxidases, C-terminal domain M1S54_RS01685 PF01565 FAD binding domain M1S54_RS01695 PF03992 Antibiotic biosynthesis monooxygenase M1S54_RS01700 PF02525 Flavodoxin-like fold M1S54_RS01710 PF07690 Major Facilitator Superfamily M1S54_RS01715 PF12805 FUSC-like inner membrane protein yccS M1S54_RS01720 PF00080 Copper/zinc superoxide dismutase (SODC) M1S54_RS01725 PF01594 AI-2E family transporter M1S54_RS01730 PF13614 AAA domain M1S54_RS01760 PF00324 Amino acid permease M1S54_RS01765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S54_RS01765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S54_RS01770 PF00202 Aminotransferase class-III M1S54_RS01775 PF04958 Arginine N-succinyltransferase beta subunit M1S54_RS01780 PF00171 Aldehyde dehydrogenase family M1S54_RS01785 PF04996 Succinylarginine dihydrolase M1S54_RS01790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S54_RS01805 PF05922 Peptidase inhibitor I9 M1S54_RS01805 PF00082 Subtilase family M1S54_RS01820 PF03466 LysR substrate binding domain M1S54_RS01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS01825 PF00892 EamA-like transporter family M1S54_RS01835 PF05746 DALR anticodon binding domain M1S54_RS01835 PF02092 Glycyl-tRNA synthetase beta subunit M1S54_RS01840 PF02091 Glycyl-tRNA synthetase alpha subunit M1S54_RS01865 PF00571 CBS domain M1S54_RS01870 PF04024 PspC domain M1S54_RS01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS01880 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S54_RS01880 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS01890 PF01488 Shikimate / quinate 5-dehydrogenase M1S54_RS01890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S54_RS01890 PF08501 Shikimate dehydrogenase substrate binding domain M1S54_RS01895 PF01218 Coproporphyrinogen III oxidase M1S54_RS01900 PF00925 GTP cyclohydrolase II M1S54_RS01905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S54_RS01905 PF02779 Transketolase, pyrimidine binding domain M1S54_RS01905 PF02780 Transketolase, C-terminal domain M1S54_RS01910 PF00459 Inositol monophosphatase family M1S54_RS01915 PF00270 DEAD/DEAH box helicase M1S54_RS01915 PF12343 Cold shock protein DEAD box A M1S54_RS01915 PF03880 DbpA RNA binding domain M1S54_RS01915 PF00271 Helicase conserved C-terminal domain M1S54_RS01925 PF00005 ABC transporter M1S54_RS01930 PF02405 Permease MlaE M1S54_RS01940 PF05494 MlaC protein M1S54_RS01950 PF01544 CorA-like Mg2+ transporter protein M1S54_RS01955 PF03641 Possible lysine decarboxylase M1S54_RS01960 PF00293 NUDIX domain M1S54_RS01965 PF00156 Phosphoribosyl transferase domain M1S54_RS01970 PF00270 DEAD/DEAH box helicase M1S54_RS01970 PF00271 Helicase conserved C-terminal domain M1S54_RS01970 PF17191 RecG wedge domain M1S54_RS01985 PF01553 Acyltransferase M1S54_RS01995 PF00375 Sodium:dicarboxylate symporter family M1S54_RS02005 PF01926 50S ribosome-binding GTPase M1S54_RS02010 PF02082 Transcriptional regulator M1S54_RS02015 PF00970 Oxidoreductase FAD-binding domain M1S54_RS02015 PF00042 Globin M1S54_RS02015 PF00175 Oxidoreductase NAD-binding domain M1S54_RS02020 PF05872 Bacterial protein of unknown function (DUF853) M1S54_RS02025 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S54_RS02030 PF00117 Glutamine amidotransferase class-I M1S54_RS02035 PF00338 Ribosomal protein S10p/S20e M1S54_RS02040 PF00297 Ribosomal protein L3 M1S54_RS02045 PF00573 Ribosomal protein L4/L1 family M1S54_RS02050 PF00276 Ribosomal protein L23 M1S54_RS02055 PF00181 Ribosomal Proteins L2, RNA binding domain M1S54_RS02055 PF03947 Ribosomal Proteins L2, C-terminal domain M1S54_RS02060 PF00203 Ribosomal protein S19 M1S54_RS02065 PF00237 Ribosomal protein L22p/L17e M1S54_RS02075 PF00252 Ribosomal protein L16p/L10e M1S54_RS02080 PF00831 Ribosomal L29 protein M1S54_RS02085 PF00366 Ribosomal protein S17 M1S54_RS02090 PF00238 Ribosomal protein L14p/L23e M1S54_RS02095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S54_RS02095 PF00467 KOW motif M1S54_RS02100 PF00281 Ribosomal protein L5 M1S54_RS02100 PF00673 ribosomal L5P family C-terminus M1S54_RS02105 PF00253 Ribosomal protein S14p/S29e M1S54_RS02110 PF00410 Ribosomal protein S8 M1S54_RS02115 PF00347 Ribosomal protein L6 M1S54_RS02120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S54_RS02125 PF00333 Ribosomal protein S5, N-terminal domain M1S54_RS02125 PF03719 Ribosomal protein S5, C-terminal domain M1S54_RS02130 PF00327 Ribosomal protein L30p/L7e M1S54_RS02135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S54_RS02140 PF00344 SecY translocase M1S54_RS02145 PF00444 Ribosomal protein L36 M1S54_RS02150 PF00416 Ribosomal protein S13/S18 M1S54_RS02155 PF00411 Ribosomal protein S11 M1S54_RS02160 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S54_RS02160 PF01479 S4 domain M1S54_RS02165 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S54_RS02165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S54_RS02165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S54_RS02170 PF01196 Ribosomal protein L17 M1S54_RS02175 PF00743 Flavin-binding monooxygenase-like M1S54_RS02180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS02180 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS02180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS02185 PF03937 Flavinator of succinate dehydrogenase M1S54_RS02215 PF09526 Probable metal-binding protein (DUF2387) M1S54_RS02220 PF01432 Peptidase family M3 M1S54_RS02225 PF00773 RNB domain M1S54_RS02225 PF17876 Cold shock domain M1S54_RS02225 PF08461 Ribonuclease R winged-helix domain M1S54_RS02225 PF08206 Ribonuclease B OB domain M1S54_RS02225 PF00575 S1 RNA binding domain M1S54_RS02270 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S54_RS02275 PF12833 Helix-turn-helix domain M1S54_RS02280 PF00892 EamA-like transporter family M1S54_RS02285 PF03631 Virulence factor BrkB M1S54_RS02290 PF03358 NADPH-dependent FMN reductase M1S54_RS02315 PF02130 Uncharacterized protein family UPF0054 M1S54_RS02320 PF02562 PhoH-like protein M1S54_RS02325 PF00919 Uncharacterized protein family UPF0004 M1S54_RS02325 PF04055 Radical SAM superfamily M1S54_RS02325 PF01938 TRAM domain M1S54_RS02330 PF10145 Phage-related minor tail protein M1S54_RS02330 PF01464 Transglycosylase SLT domain M1S54_RS02330 PF01551 Peptidase family M23 M1S54_RS02340 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S54_RS02340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S54_RS02360 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S54_RS02365 PF01066 CDP-alcohol phosphatidyltransferase M1S54_RS02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS02410 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS02410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS02415 PF17932 Tetracyclin repressor-like, C-terminal domain M1S54_RS02415 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS02430 PF01039 Carboxyl transferase domain M1S54_RS02435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS02435 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS02435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS02445 PF02785 Biotin carboxylase C-terminal domain M1S54_RS02445 PF00289 Biotin carboxylase, N-terminal domain M1S54_RS02445 PF00364 Biotin-requiring enzyme M1S54_RS02445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S54_RS02455 PF04386 Stringent starvation protein B M1S54_RS02460 PF00043 Glutathione S-transferase, C-terminal domain M1S54_RS02460 PF13417 Glutathione S-transferase, N-terminal domain M1S54_RS02465 PF00380 Ribosomal protein S9/S16 M1S54_RS02470 PF00572 Ribosomal protein L13 M1S54_RS02475 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S54_RS02480 PF00398 Ribosomal RNA adenine dimethylase M1S54_RS02485 PF00149 Calcineurin-like phosphoesterase M1S54_RS02505 PF13167 GTP-binding GTPase N-terminal M1S54_RS02505 PF01926 50S ribosome-binding GTPase M1S54_RS02505 PF16360 GTP-binding GTPase Middle Region M1S54_RS02515 PF13091 PLD-like domain M1S54_RS02520 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S54_RS02520 PF00149 Calcineurin-like phosphoesterase M1S54_RS02525 PF01389 OmpA-like transmembrane domain M1S54_RS02525 PF00691 OmpA family M1S54_RS02530 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS02530 PF17152 Periplasmic sensor domain M1S54_RS02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS02565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S54_RS02575 PF00753 Metallo-beta-lactamase superfamily M1S54_RS02575 PF04273 Putative phosphatase (DUF442) M1S54_RS02580 PF00561 alpha/beta hydrolase fold M1S54_RS02585 PF00085 Thioredoxin M1S54_RS02590 PF03061 Thioesterase superfamily M1S54_RS02600 PF04461 Protein of unknown function (DUF520) M1S54_RS02610 PF01266 FAD dependent oxidoreductase M1S54_RS02610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S54_RS02620 PF03795 YCII-related domain M1S54_RS02625 PF04279 Intracellular septation protein A M1S54_RS02630 PF02811 PHP domain M1S54_RS02635 PF01062 Bestrophin, RFP-TM, chloride channel M1S54_RS02640 PF04002 RadC-like JAB domain M1S54_RS02645 PF04127 DNA / pantothenate metabolism flavoprotein M1S54_RS02645 PF02441 Flavoprotein M1S54_RS02650 PF07549 SecD/SecF GG Motif M1S54_RS02650 PF02355 Protein export membrane protein M1S54_RS02655 PF13721 SecD export protein N-terminal TM region M1S54_RS02655 PF02355 Protein export membrane protein M1S54_RS02655 PF07549 SecD/SecF GG Motif M1S54_RS02660 PF02699 Preprotein translocase subunit M1S54_RS02665 PF01702 Queuine tRNA-ribosyltransferase M1S54_RS02680 PF02547 Queuosine biosynthesis protein M1S54_RS02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS02690 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS02690 PF07689 KaiB domain M1S54_RS02695 PF08335 GlnD PII-uridylyltransferase M1S54_RS02695 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S54_RS02700 PF01063 Amino-transferase class IV M1S54_RS02715 PF01522 Polysaccharide deacetylase M1S54_RS02720 PF00535 Glycosyl transferase family 2 M1S54_RS02725 PF13439 Glycosyltransferase Family 4 M1S54_RS02725 PF00534 Glycosyl transferases group 1 M1S54_RS02750 PF17101 Stealth protein CR1, conserved region 1 M1S54_RS02750 PF11380 Stealth protein CR2, conserved region 2 M1S54_RS02750 PF17102 Stealth protein CR3, conserved region 3 M1S54_RS02755 PF01336 OB-fold nucleic acid binding domain M1S54_RS02755 PF02938 GAD domain M1S54_RS02755 PF00152 tRNA synthetases class II (D, K and N) M1S54_RS02765 PF00593 TonB dependent receptor M1S54_RS02765 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS02785 PF06146 Phosphate-starvation-inducible E M1S54_RS02790 PF02798 Glutathione S-transferase, N-terminal domain M1S54_RS02790 PF00043 Glutathione S-transferase, C-terminal domain M1S54_RS02795 PF03466 LysR substrate binding domain M1S54_RS02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS02800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS02800 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S54_RS02800 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS02800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S54_RS02805 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS02815 PF00672 HAMP domain M1S54_RS02815 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS02820 PF00072 Response regulator receiver domain M1S54_RS02820 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS02825 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S54_RS02845 PF01923 Cobalamin adenosyltransferase M1S54_RS02850 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS02850 PF00593 TonB dependent receptor M1S54_RS02855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S54_RS02860 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS02885 PF00290 Tryptophan synthase alpha chain M1S54_RS02890 PF01039 Carboxyl transferase domain M1S54_RS02895 PF02875 Mur ligase family, glutamate ligase domain M1S54_RS02895 PF08245 Mur ligase middle domain M1S54_RS02910 PF00753 Metallo-beta-lactamase superfamily M1S54_RS02915 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S54_RS02915 PF00578 AhpC/TSA family M1S54_RS02920 PF01043 SecA preprotein cross-linking domain M1S54_RS02920 PF02810 SEC-C motif M1S54_RS02920 PF07517 SecA DEAD-like domain M1S54_RS02920 PF07516 SecA Wing and Scaffold domain M1S54_RS02930 PF07690 Major Facilitator Superfamily M1S54_RS02930 PF00083 Sugar (and other) transporter M1S54_RS02935 PF03006 Haemolysin-III related M1S54_RS02960 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS02960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S54_RS02960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S54_RS02965 PF00108 Thiolase, N-terminal domain M1S54_RS02965 PF02803 Thiolase, C-terminal domain M1S54_RS02970 PF02311 AraC-like ligand binding domain M1S54_RS02970 PF12833 Helix-turn-helix domain M1S54_RS02975 PF02515 CoA-transferase family III M1S54_RS02980 PF04966 Carbohydrate-selective porin, OprB family M1S54_RS02985 PF01011 PQQ enzyme repeat M1S54_RS02990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S54_RS02990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S54_RS03000 PF00893 Small Multidrug Resistance protein M1S54_RS03010 PF02803 Thiolase, C-terminal domain M1S54_RS03010 PF00108 Thiolase, N-terminal domain M1S54_RS03020 PF13505 Outer membrane protein beta-barrel domain M1S54_RS03020 PF00691 OmpA family M1S54_RS03030 PF01139 tRNA-splicing ligase RtcB M1S54_RS03035 PF00324 Amino acid permease M1S54_RS03040 PF08468 Methyltransferase small domain N-terminal M1S54_RS03040 PF05175 Methyltransferase small domain M1S54_RS03045 PF00860 Permease family M1S54_RS03050 PF00679 Elongation factor G C-terminus M1S54_RS03050 PF03144 Elongation factor Tu domain 2 M1S54_RS03050 PF00009 Elongation factor Tu GTP binding domain M1S54_RS03055 PF01741 Large-conductance mechanosensitive channel, MscL M1S54_RS03070 PF06827 Zinc finger found in FPG and IleRS M1S54_RS03070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S54_RS03070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S54_RS03075 PF02245 Methylpurine-DNA glycosylase (MPG) M1S54_RS03095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S54_RS03110 PF13098 Thioredoxin-like domain M1S54_RS03110 PF10411 Disulfide bond isomerase protein N-terminus M1S54_RS03115 PF01571 Aminomethyltransferase folate-binding domain M1S54_RS03125 PF04343 Protein of unknown function, DUF488 M1S54_RS03130 PF08274 PhnA Zinc-Ribbon M1S54_RS03130 PF03831 PhnA domain M1S54_RS03135 PF07411 Domain of unknown function (DUF1508) M1S54_RS03140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S54_RS03140 PF03129 Anticodon binding domain M1S54_RS03140 PF04073 Aminoacyl-tRNA editing domain M1S54_RS03145 PF00873 AcrB/AcrD/AcrF family M1S54_RS03160 PF00072 Response regulator receiver domain M1S54_RS03165 PF00072 Response regulator receiver domain M1S54_RS03170 PF01584 CheW-like domain M1S54_RS03175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S54_RS03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S54_RS03180 PF00072 Response regulator receiver domain M1S54_RS03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS03180 PF01584 CheW-like domain M1S54_RS03180 PF01627 Hpt domain M1S54_RS03190 PF07687 Peptidase dimerisation domain M1S54_RS03190 PF01546 Peptidase family M20/M25/M40 M1S54_RS03195 PF08085 Entericidin EcnA/B family M1S54_RS03205 PF04304 Protein of unknown function (DUF454) M1S54_RS03210 PF17969 L,D-transpeptidase C-terminal domain M1S54_RS03210 PF03734 L,D-transpeptidase catalytic domain M1S54_RS03250 PF00258 Flavodoxin M1S54_RS03250 PF00175 Oxidoreductase NAD-binding domain M1S54_RS03250 PF00667 FAD binding domain M1S54_RS03260 PF12805 FUSC-like inner membrane protein yccS M1S54_RS03265 PF07690 Major Facilitator Superfamily M1S54_RS03270 PF00881 Nitroreductase family M1S54_RS03285 PF01235 Sodium:alanine symporter family M1S54_RS03290 PF01734 Patatin-like phospholipase M1S54_RS03295 PF13291 ACT domain M1S54_RS03295 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS03300 PF05992 SbmA/BacA-like family M1S54_RS03335 PF02934 GatB/GatE catalytic domain M1S54_RS03335 PF02637 GatB domain M1S54_RS03340 PF01425 Amidase M1S54_RS03345 PF02686 Glu-tRNAGln amidotransferase C subunit M1S54_RS03355 PF04085 rod shape-determining protein MreC M1S54_RS03360 PF04093 rod shape-determining protein MreD M1S54_RS03365 PF02545 Maf-like protein M1S54_RS03370 PF00575 S1 RNA binding domain M1S54_RS03370 PF10150 Ribonuclease E/G family M1S54_RS03380 PF06974 Protein of unknown function (DUF1298) M1S54_RS03380 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S54_RS03385 PF01507 Phosphoadenosine phosphosulfate reductase family M1S54_RS03400 PF02525 Flavodoxin-like fold M1S54_RS03420 PF02673 Bacitracin resistance protein BacA M1S54_RS03425 PF12833 Helix-turn-helix domain M1S54_RS03425 PF06719 AraC-type transcriptional regulator N-terminus M1S54_RS03430 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS03430 PF14765 Polyketide synthase dehydratase M1S54_RS03430 PF00550 Phosphopantetheine attachment site M1S54_RS03430 PF08659 KR domain M1S54_RS03430 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S54_RS03430 PF00698 Acyl transferase domain M1S54_RS03430 PF16197 Ketoacyl-synthetase C-terminal extension M1S54_RS03430 PF09277 Erythronolide synthase, docking M1S54_RS03430 PF08990 Erythronolide synthase docking M1S54_RS03430 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S54_RS03435 PF01965 DJ-1/PfpI family M1S54_RS03445 PF00324 Amino acid permease M1S54_RS03450 PF04303 PrpF protein M1S54_RS03455 PF00348 Polyprenyl synthetase M1S54_RS03460 PF04237 YjbR M1S54_RS03465 PF01145 SPFH domain / Band 7 family M1S54_RS03475 PF01734 Patatin-like phospholipase M1S54_RS03495 PF00884 Sulfatase M1S54_RS03495 PF08019 Phosphoethanolamine transferase EptA/EptB M1S54_RS03500 PF00072 Response regulator receiver domain M1S54_RS03500 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS03505 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS03505 PF08521 Two-component sensor kinase N-terminal M1S54_RS03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS03515 PF00909 Ammonium Transporter Family M1S54_RS03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS03520 PF03466 LysR substrate binding domain M1S54_RS03540 PF10458 Valyl tRNA synthetase tRNA binding arm M1S54_RS03540 PF00133 tRNA synthetases class I (I, L, M and V) M1S54_RS03540 PF08264 Anticodon-binding domain of tRNA M1S54_RS03560 PF01906 Putative heavy-metal-binding M1S54_RS03565 PF01906 Putative heavy-metal-binding M1S54_RS03570 PF02321 Outer membrane efflux protein M1S54_RS03575 PF00873 AcrB/AcrD/AcrF family M1S54_RS03580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S54_RS03580 PF00529 HlyD membrane-fusion protein of T1SS M1S54_RS03585 PF01569 PAP2 superfamily M1S54_RS03595 PF00348 Polyprenyl synthetase M1S54_RS03605 PF00829 Ribosomal prokaryotic L21 protein M1S54_RS03610 PF01016 Ribosomal L27 protein M1S54_RS03625 PF02403 Seryl-tRNA synthetase N-terminal domain M1S54_RS03625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S54_RS03630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S54_RS03630 PF10414 Sirohaem synthase dimerisation region M1S54_RS03630 PF14824 Sirohaem biosynthesis protein central M1S54_RS03635 PF00588 SpoU rRNA Methylase family M1S54_RS03640 PF01638 HxlR-like helix-turn-helix M1S54_RS03645 PF03358 NADPH-dependent FMN reductase M1S54_RS03650 PF13520 Amino acid permease M1S54_RS03655 PF00465 Iron-containing alcohol dehydrogenase M1S54_RS03665 PF03099 Biotin/lipoate A/B protein ligase family M1S54_RS03670 PF04359 Protein of unknown function (DUF493) M1S54_RS03675 PF04546 Sigma-70, non-essential region M1S54_RS03675 PF00140 Sigma-70 factor, region 1.2 M1S54_RS03675 PF04542 Sigma-70 region 2 M1S54_RS03675 PF04539 Sigma-70 region 3 M1S54_RS03675 PF04545 Sigma-70, region 4 M1S54_RS03675 PF03979 Sigma-70 factor, region 1.1 M1S54_RS03695 PF00581 Rhodanese-like domain M1S54_RS03695 PF17773 UPF0176 acylphosphatase like domain M1S54_RS03705 PF00285 Citrate synthase, C-terminal domain M1S54_RS03710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S54_RS03715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S54_RS03720 PF00890 FAD binding domain M1S54_RS03720 PF02910 Fumarate reductase flavoprotein C-term M1S54_RS03725 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S54_RS03740 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S54_RS03740 PF02779 Transketolase, pyrimidine binding domain M1S54_RS03740 PF00676 Dehydrogenase E1 component M1S54_RS03740 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S54_RS03745 PF02817 e3 binding domain M1S54_RS03745 PF00364 Biotin-requiring enzyme M1S54_RS03745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S54_RS03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS03750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S54_RS03755 PF00549 CoA-ligase M1S54_RS03755 PF08442 ATP-grasp domain M1S54_RS03760 PF00549 CoA-ligase M1S54_RS03760 PF02629 CoA binding domain M1S54_RS03765 PF00579 tRNA synthetases class I (W and Y) M1S54_RS03770 PF05661 Protein of unknown function (DUF808) M1S54_RS03775 PF04228 Putative neutral zinc metallopeptidase M1S54_RS03780 PF00999 Sodium/hydrogen exchanger family M1S54_RS03795 PF09587 Bacterial capsule synthesis protein PGA_cap M1S54_RS03805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S54_RS03810 PF00582 Universal stress protein family M1S54_RS03815 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS03820 PF03449 Transcription elongation factor, N-terminal M1S54_RS03820 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S54_RS03825 PF02142 MGS-like domain M1S54_RS03825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S54_RS03825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S54_RS03830 PF00117 Glutamine amidotransferase class-I M1S54_RS03830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S54_RS03845 PF01985 CRS1 / YhbY (CRM) domain M1S54_RS03850 PF01728 FtsJ-like methyltransferase M1S54_RS03855 PF17862 AAA+ lid domain M1S54_RS03855 PF06480 FtsH Extracellular M1S54_RS03855 PF01434 Peptidase family M41 M1S54_RS03855 PF00004 ATPase family associated with various cellular activities (AAA) M1S54_RS03860 PF00809 Pterin binding enzyme M1S54_RS03880 PF09423 PhoD-like phosphatase M1S54_RS03880 PF16655 PhoD-like phosphatase, N-terminal domain M1S54_RS03895 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S54_RS03895 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S54_RS03910 PF00083 Sugar (and other) transporter M1S54_RS03915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S54_RS03915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S54_RS03920 PF01266 FAD dependent oxidoreductase M1S54_RS03920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S54_RS03925 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S54_RS03925 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S54_RS03930 PF00781 Diacylglycerol kinase catalytic domain M1S54_RS03935 PF00149 Calcineurin-like phosphoesterase M1S54_RS03945 PF00166 Chaperonin 10 Kd subunit M1S54_RS03950 PF00118 TCP-1/cpn60 chaperonin family M1S54_RS03955 PF01219 Prokaryotic diacylglycerol kinase M1S54_RS03965 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S54_RS03970 PF00873 AcrB/AcrD/AcrF family M1S54_RS03980 PF01435 Peptidase family M48 M1S54_RS03985 PF01464 Transglycosylase SLT domain M1S54_RS03990 PF01171 PP-loop family M1S54_RS04000 PF01464 Transglycosylase SLT domain M1S54_RS04000 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S54_RS04005 PF03449 Transcription elongation factor, N-terminal M1S54_RS04005 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S54_RS04020 PF00501 AMP-binding enzyme M1S54_RS04020 PF00668 Condensation domain M1S54_RS04020 PF00550 Phosphopantetheine attachment site M1S54_RS04020 PF00975 Thioesterase domain M1S54_RS04020 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS04050 PF00881 Nitroreductase family M1S54_RS04065 PF02595 Glycerate kinase family M1S54_RS04070 PF00384 Molybdopterin oxidoreductase M1S54_RS04075 PF02634 FdhD/NarQ family M1S54_RS04080 PF06803 Protein of unknown function (DUF1232) M1S54_RS04085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S54_RS04085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S54_RS04085 PF11890 Domain of unknown function (DUF3410) M1S54_RS04090 PF00152 tRNA synthetases class II (D, K and N) M1S54_RS04100 PF18073 Rubredoxin metal binding domain M1S54_RS04105 PF00324 Amino acid permease M1S54_RS04115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S54_RS04115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S54_RS04120 PF01678 Diaminopimelate epimerase M1S54_RS04125 PF01810 LysE type translocator M1S54_RS04130 PF00589 Phage integrase family M1S54_RS04130 PF02899 Phage integrase, N-terminal SAM-like domain M1S54_RS04135 PF01012 Electron transfer flavoprotein domain M1S54_RS04140 PF00766 Electron transfer flavoprotein FAD-binding domain M1S54_RS04140 PF01012 Electron transfer flavoprotein domain M1S54_RS04145 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S54_RS04145 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S54_RS04160 PF00535 Glycosyl transferase family 2 M1S54_RS04180 PF13533 Biotin-lipoyl like M1S54_RS04190 PF00266 Aminotransferase class-V M1S54_RS04205 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S54_RS04215 PF02687 FtsX-like permease family M1S54_RS04215 PF12704 MacB-like periplasmic core domain M1S54_RS04220 PF00005 ABC transporter M1S54_RS04225 PF13567 Domain of unknown function (DUF4131) M1S54_RS04225 PF03772 Competence protein M1S54_RS04225 PF00753 Metallo-beta-lactamase superfamily M1S54_RS04235 PF01343 Peptidase family S49 M1S54_RS04235 PF06965 Na+/H+ antiporter 1 M1S54_RS04240 PF12697 Alpha/beta hydrolase family M1S54_RS04245 PF00551 Formyl transferase M1S54_RS04250 PF00586 AIR synthase related protein, N-terminal domain M1S54_RS04250 PF02769 AIR synthase related protein, C-terminal domain M1S54_RS04255 PF01594 AI-2E family transporter M1S54_RS04260 PF00308 Bacterial dnaA protein M1S54_RS04260 PF08299 Bacterial dnaA protein helix-turn-helix M1S54_RS04260 PF11638 DnaA N-terminal domain M1S54_RS04290 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S54_RS04290 PF00588 SpoU rRNA Methylase family M1S54_RS04295 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S54_RS04305 PF00691 OmpA family M1S54_RS04310 PF07676 WD40-like Beta Propeller Repeat M1S54_RS04310 PF04052 TolB amino-terminal domain M1S54_RS04320 PF02472 Biopolymer transport protein ExbD/TolR M1S54_RS04325 PF01618 MotA/TolQ/ExbB proton channel family M1S54_RS04330 PF03061 Thioesterase superfamily M1S54_RS04335 PF07687 Peptidase dimerisation domain M1S54_RS04335 PF01546 Peptidase family M20/M25/M40 M1S54_RS04340 PF17864 RuvB AAA lid domain M1S54_RS04340 PF05491 RuvB C-terminal winged helix domain M1S54_RS04340 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S54_RS04345 PF07499 RuvA, C-terminal domain M1S54_RS04345 PF01330 RuvA N terminal domain M1S54_RS04350 PF01966 HD domain M1S54_RS04355 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S54_RS04355 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S54_RS04355 PF02769 AIR synthase related protein, C-terminal domain M1S54_RS04360 PF07690 Major Facilitator Superfamily M1S54_RS04365 PF01784 NIF3 (NGG1p interacting factor 3) M1S54_RS04370 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS04375 PF01467 Cytidylyltransferase-like M1S54_RS04375 PF00293 NUDIX domain M1S54_RS04385 PF00578 AhpC/TSA family M1S54_RS04400 PF06508 Queuosine biosynthesis protein QueC M1S54_RS04410 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS04410 PF14602 Hexapeptide repeat of succinyl-transferase M1S54_RS04410 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S54_RS04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS04420 PF03466 LysR substrate binding domain M1S54_RS04425 PF12857 TOBE-like domain M1S54_RS04425 PF00005 ABC transporter M1S54_RS04430 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS04435 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS04450 PF01063 Amino-transferase class IV M1S54_RS04455 PF02618 YceG-like family M1S54_RS04460 PF02223 Thymidylate kinase M1S54_RS04470 PF00890 FAD binding domain M1S54_RS04470 PF02910 Fumarate reductase flavoprotein C-term M1S54_RS04475 PF13180 PDZ domain M1S54_RS04485 PF06421 GTP-binding protein LepA C-terminus M1S54_RS04485 PF00009 Elongation factor Tu GTP binding domain M1S54_RS04485 PF03144 Elongation factor Tu domain 2 M1S54_RS04485 PF00679 Elongation factor G C-terminus M1S54_RS04490 PF10502 Signal peptidase, peptidase S26 M1S54_RS04500 PF14622 Ribonuclease-III-like M1S54_RS04500 PF00035 Double-stranded RNA binding motif M1S54_RS04505 PF07650 KH domain M1S54_RS04505 PF01926 50S ribosome-binding GTPase M1S54_RS04515 PF11967 Recombination protein O N terminal M1S54_RS04515 PF02565 Recombination protein O C terminal M1S54_RS04520 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S54_RS04525 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S54_RS04530 PF00106 short chain dehydrogenase M1S54_RS04560 PF00155 Aminotransferase class I and II M1S54_RS04570 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS04570 PF17151 Periplasmic sensor domain M1S54_RS04580 PF00271 Helicase conserved C-terminal domain M1S54_RS04580 PF04851 Type III restriction enzyme, res subunit M1S54_RS04580 PF02151 UvrB/uvrC motif M1S54_RS04580 PF12344 Ultra-violet resistance protein B M1S54_RS04580 PF17757 UvrB interaction domain M1S54_RS04590 PF00892 EamA-like transporter family M1S54_RS04595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S54_RS04595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S54_RS04610 PF01018 GTP1/OBG M1S54_RS04610 PF01926 50S ribosome-binding GTPase M1S54_RS04615 PF00696 Amino acid kinase family M1S54_RS04615 PF01472 PUA domain M1S54_RS04625 PF07759 Protein of unknown function (DUF1615) M1S54_RS04630 PF01207 Dihydrouridine synthase (Dus) M1S54_RS04635 PF03060 Nitronate monooxygenase M1S54_RS04650 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S54_RS04680 PF00875 DNA photolyase M1S54_RS04680 PF03441 FAD binding domain of DNA photolyase M1S54_RS04685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S54_RS04690 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS04695 PF07943 Penicillin-binding protein 5, C-terminal domain M1S54_RS04695 PF00768 D-alanyl-D-alanine carboxypeptidase M1S54_RS04705 PF03971 Monomeric isocitrate dehydrogenase M1S54_RS04710 PF00849 RNA pseudouridylate synthase M1S54_RS04715 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S54_RS04735 PF06779 Uncharacterised MFS-type transporter YbfB M1S54_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS04740 PF03466 LysR substrate binding domain M1S54_RS04745 PF00375 Sodium:dicarboxylate symporter family M1S54_RS04750 PF02567 Phenazine biosynthesis-like protein M1S54_RS04755 PF05193 Peptidase M16 inactive domain M1S54_RS04755 PF00675 Insulinase (Peptidase family M16) M1S54_RS04780 PF02581 Thiamine monophosphate synthase M1S54_RS04785 PF00202 Aminotransferase class-III M1S54_RS04795 PF00849 RNA pseudouridylate synthase M1S54_RS04800 PF18337 RapA N-terminal Tudor like domain M1S54_RS04800 PF00271 Helicase conserved C-terminal domain M1S54_RS04800 PF00176 SNF2 family N-terminal domain M1S54_RS04800 PF12137 RNA polymerase recycling family C-terminal M1S54_RS04800 PF18339 RapA N-terminal Tudor like domain 1 M1S54_RS04810 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS04815 PF00970 Oxidoreductase FAD-binding domain M1S54_RS04815 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS04815 PF00175 Oxidoreductase NAD-binding domain M1S54_RS04820 PF00487 Fatty acid desaturase M1S54_RS04830 PF17754 MftR C-terminal domain M1S54_RS04830 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS04840 PF00202 Aminotransferase class-III M1S54_RS04845 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S54_RS04850 PF00171 Aldehyde dehydrogenase family M1S54_RS04855 PF01037 Lrp/AsnC ligand binding domain M1S54_RS04860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S54_RS04860 PF00205 Thiamine pyrophosphate enzyme, central domain M1S54_RS04860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S54_RS04865 PF00324 Amino acid permease M1S54_RS04870 PF12849 PBP superfamily domain M1S54_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS04885 PF00005 ABC transporter M1S54_RS04890 PF08496 Peptidase family S49 N-terminal M1S54_RS04890 PF01343 Peptidase family S49 M1S54_RS04905 PF00206 Lyase M1S54_RS04905 PF08328 Adenylosuccinate lyase C-terminal M1S54_RS04910 PF04356 Protein of unknown function (DUF489) M1S54_RS04920 PF13344 Haloacid dehalogenase-like hydrolase M1S54_RS04920 PF00293 NUDIX domain M1S54_RS04925 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS04930 PF07943 Penicillin-binding protein 5, C-terminal domain M1S54_RS04930 PF00768 D-alanyl-D-alanine carboxypeptidase M1S54_RS04945 PF01975 Survival protein SurE M1S54_RS04950 PF01476 LysM domain M1S54_RS04950 PF01551 Peptidase family M23 M1S54_RS04955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS04955 PF03466 LysR substrate binding domain M1S54_RS04960 PF13654 AAA domain M1S54_RS04960 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S54_RS04965 PF07690 Major Facilitator Superfamily M1S54_RS04970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S54_RS04975 PF13593 SBF-like CPA transporter family (DUF4137) M1S54_RS04980 PF01197 Ribosomal protein L31 M1S54_RS04995 PF04055 Radical SAM superfamily M1S54_RS05000 PF01132 Elongation factor P (EF-P) OB domain M1S54_RS05000 PF08207 Elongation factor P (EF-P) KOW-like domain M1S54_RS05000 PF09285 Elongation factor P, C-terminal M1S54_RS05005 PF02554 Carbon starvation protein CstA M1S54_RS05005 PF13722 5TM C-terminal transporter carbon starvation CstA M1S54_RS05010 PF04328 Selenoprotein, putative M1S54_RS05045 PF17853 GGDEF-like domain M1S54_RS05045 PF13556 PucR C-terminal helix-turn-helix domain M1S54_RS05045 PF06018 CodY GAF-like domain M1S54_RS05060 PF00171 Aldehyde dehydrogenase family M1S54_RS05065 PF00324 Amino acid permease M1S54_RS05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS05070 PF03466 LysR substrate binding domain M1S54_RS05075 PF02028 BCCT, betaine/carnitine/choline family transporter M1S54_RS05080 PF02028 BCCT, betaine/carnitine/choline family transporter M1S54_RS05085 PF00355 Rieske [2Fe-2S] domain M1S54_RS05085 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S54_RS05090 PF00171 Aldehyde dehydrogenase family M1S54_RS05100 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS05100 PF18113 Rubredoxin binding C-terminal domain M1S54_RS05105 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S54_RS05105 PF01266 FAD dependent oxidoreductase M1S54_RS05125 PF00892 EamA-like transporter family M1S54_RS05135 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S54_RS05140 PF00083 Sugar (and other) transporter M1S54_RS05145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S54_RS05145 PF13378 Enolase C-terminal domain-like M1S54_RS05150 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS05150 PF08990 Erythronolide synthase docking M1S54_RS05150 PF08659 KR domain M1S54_RS05150 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S54_RS05150 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S54_RS05150 PF16197 Ketoacyl-synthetase C-terminal extension M1S54_RS05150 PF14765 Polyketide synthase dehydratase M1S54_RS05150 PF09277 Erythronolide synthase, docking M1S54_RS05150 PF00698 Acyl transferase domain M1S54_RS05150 PF00550 Phosphopantetheine attachment site M1S54_RS05155 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS05175 PF02678 Pirin M1S54_RS05175 PF17954 Quercetinase C-terminal cupin domain M1S54_RS05185 PF13309 HTH domain M1S54_RS05185 PF08348 YheO-like PAS domain M1S54_RS05195 PF00501 AMP-binding enzyme M1S54_RS05195 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS05195 PF00668 Condensation domain M1S54_RS05195 PF00550 Phosphopantetheine attachment site M1S54_RS05200 PF00975 Thioesterase domain M1S54_RS05200 PF00668 Condensation domain M1S54_RS05200 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS05200 PF00501 AMP-binding enzyme M1S54_RS05200 PF00550 Phosphopantetheine attachment site M1S54_RS05205 PF01032 FecCD transport family M1S54_RS05210 PF01032 FecCD transport family M1S54_RS05215 PF00005 ABC transporter M1S54_RS05220 PF01497 Periplasmic binding protein M1S54_RS05225 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS05225 PF00593 TonB dependent receptor M1S54_RS05230 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S54_RS05235 PF00501 AMP-binding enzyme M1S54_RS05235 PF00668 Condensation domain M1S54_RS05235 PF00550 Phosphopantetheine attachment site M1S54_RS05240 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS05240 PF00501 AMP-binding enzyme M1S54_RS05245 PF00857 Isochorismatase family M1S54_RS05245 PF00550 Phosphopantetheine attachment site M1S54_RS05250 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S54_RS05260 PF00005 ABC transporter M1S54_RS05265 PF00005 ABC transporter M1S54_RS05270 PF00975 Thioesterase domain M1S54_RS05280 PF00425 chorismate binding enzyme M1S54_RS05290 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S54_RS05295 PF05675 Protein of unknown function (DUF817) M1S54_RS05310 PF00144 Beta-lactamase M1S54_RS05320 PF01227 GTP cyclohydrolase I M1S54_RS05325 PF01799 [2Fe-2S] binding domain M1S54_RS05325 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS05330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S54_RS05330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S54_RS05345 PF00218 Indole-3-glycerol phosphate synthase M1S54_RS05350 PF02885 Glycosyl transferase family, helical bundle domain M1S54_RS05350 PF00591 Glycosyl transferase family, a/b domain M1S54_RS05355 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS05355 PF00593 TonB dependent receptor M1S54_RS05360 PF11838 ERAP1-like C-terminal domain M1S54_RS05360 PF01433 Peptidase family M1 domain M1S54_RS05365 PF00117 Glutamine amidotransferase class-I M1S54_RS05710 PF13356 Arm DNA-binding domain M1S54_RS05710 PF00589 Phage integrase family M1S54_RS05720 PF00854 POT family M1S54_RS05725 PF00120 Glutamine synthetase, catalytic domain M1S54_RS05725 PF03951 Glutamine synthetase, beta-Grasp domain M1S54_RS05730 PF04345 Chorismate lyase M1S54_RS05735 PF01040 UbiA prenyltransferase family M1S54_RS05770 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S54_RS05770 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S54_RS05775 PF01784 NIF3 (NGG1p interacting factor 3) M1S54_RS05780 PF13180 PDZ domain M1S54_RS05785 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S54_RS05785 PF01743 Poly A polymerase head domain M1S54_RS05790 PF03949 Malic enzyme, NAD binding domain M1S54_RS05790 PF01515 Phosphate acetyl/butaryl transferase M1S54_RS05790 PF00390 Malic enzyme, N-terminal domain M1S54_RS05795 PF00563 EAL domain M1S54_RS05795 PF03707 Bacterial signalling protein N terminal repeat M1S54_RS05795 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS05800 PF04452 RNA methyltransferase M1S54_RS05805 PF02219 Methylenetetrahydrofolate reductase M1S54_RS05810 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S54_RS05810 PF05221 S-adenosyl-L-homocysteine hydrolase M1S54_RS05825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS05825 PF09317 Domain of unknown function (DUF1974) M1S54_RS05825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS05830 PF04055 Radical SAM superfamily M1S54_RS05835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S54_RS05835 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS05845 PF07690 Major Facilitator Superfamily M1S54_RS05855 PF00557 Metallopeptidase family M24 M1S54_RS05860 PF00318 Ribosomal protein S2 M1S54_RS05865 PF00889 Elongation factor TS M1S54_RS05875 PF12833 Helix-turn-helix domain M1S54_RS05895 PF03330 Lytic transglycolase M1S54_RS05895 PF05036 Sporulation related domain M1S54_RS05900 PF13406 Transglycosylase SLT domain M1S54_RS05905 PF01098 Cell cycle protein M1S54_RS05915 PF14489 QueF-like protein M1S54_RS05915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S54_RS05920 PF01061 ABC-2 type transporter M1S54_RS05925 PF00005 ABC transporter M1S54_RS05955 PF00464 Serine hydroxymethyltransferase M1S54_RS05960 PF02321 Outer membrane efflux protein M1S54_RS05965 PF00873 AcrB/AcrD/AcrF family M1S54_RS05970 PF13533 Biotin-lipoyl like M1S54_RS05975 PF03466 LysR substrate binding domain M1S54_RS05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS05980 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S54_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS05990 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS05995 PF00005 ABC transporter M1S54_RS06000 PF00893 Small Multidrug Resistance protein M1S54_RS06005 PF00037 4Fe-4S binding domain M1S54_RS06010 PF01136 Peptidase family U32 M1S54_RS06010 PF16325 Peptidase family U32 C-terminal domain M1S54_RS06015 PF00155 Aminotransferase class I and II M1S54_RS06015 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS06020 PF02567 Phenazine biosynthesis-like protein M1S54_RS06025 PF00175 Oxidoreductase NAD-binding domain M1S54_RS06025 PF00970 Oxidoreductase FAD-binding domain M1S54_RS06030 PF01980 tRNA-methyltransferase O M1S54_RS06030 PF18389 TrmO C-terminal domain M1S54_RS06040 PF00437 Type II/IV secretion system protein M1S54_RS06040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S54_RS06050 PF00072 Response regulator receiver domain M1S54_RS06050 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS06055 PF08521 Two-component sensor kinase N-terminal M1S54_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS06055 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS06065 PF00293 NUDIX domain M1S54_RS06075 PF00912 Transglycosylase M1S54_RS06075 PF00905 Penicillin binding protein transpeptidase domain M1S54_RS06075 PF14814 Bifunctional transglycosylase second domain M1S54_RS06080 PF01513 ATP-NAD kinase M1S54_RS06085 PF07023 Protein of unknown function (DUF1315) M1S54_RS06090 PF02885 Glycosyl transferase family, helical bundle domain M1S54_RS06090 PF00591 Glycosyl transferase family, a/b domain M1S54_RS06095 PF00375 Sodium:dicarboxylate symporter family M1S54_RS06100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS06100 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS06100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS06105 PF00756 Putative esterase M1S54_RS06110 PF01817 Chorismate mutase type II M1S54_RS06110 PF00800 Prephenate dehydratase M1S54_RS06110 PF01842 ACT domain M1S54_RS06115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S54_RS06125 PF07687 Peptidase dimerisation domain M1S54_RS06125 PF01546 Peptidase family M20/M25/M40 M1S54_RS06130 PF12706 Beta-lactamase superfamily domain M1S54_RS06140 PF03883 Peroxide stress protein YaaA M1S54_RS06150 PF05690 Thiazole biosynthesis protein ThiG M1S54_RS06160 PF04241 Protein of unknown function (DUF423) M1S54_RS06165 PF04545 Sigma-70, region 4 M1S54_RS06165 PF00140 Sigma-70 factor, region 1.2 M1S54_RS06165 PF04542 Sigma-70 region 2 M1S54_RS06180 PF00313 'Cold-shock' DNA-binding domain M1S54_RS06185 PF00270 DEAD/DEAH box helicase M1S54_RS06185 PF00271 Helicase conserved C-terminal domain M1S54_RS06195 PF00881 Nitroreductase family M1S54_RS06200 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S54_RS06200 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S54_RS06210 PF00589 Phage integrase family M1S54_RS06550 PF01180 Dihydroorotate dehydrogenase M1S54_RS06555 PF02674 Colicin V production protein M1S54_RS06560 PF00156 Phosphoribosyl transferase domain M1S54_RS06575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S54_RS06575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S54_RS06580 PF01435 Peptidase family M48 M1S54_RS06585 PF09424 Yqey-like protein M1S54_RS06590 PF01165 Ribosomal protein S21 M1S54_RS06595 PF00814 Glycoprotease family M1S54_RS06615 PF00069 Protein kinase domain M1S54_RS06640 PF03466 LysR substrate binding domain M1S54_RS06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS06645 PF00202 Aminotransferase class-III M1S54_RS06650 PF00171 Aldehyde dehydrogenase family M1S54_RS06655 PF00324 Amino acid permease M1S54_RS06685 PF04076 Bacterial OB fold (BOF) protein M1S54_RS06710 PF00561 alpha/beta hydrolase fold M1S54_RS06715 PF03616 Sodium/glutamate symporter M1S54_RS06725 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS06725 PF07729 FCD domain M1S54_RS06775 PF08946 Osmosensory transporter coiled coil M1S54_RS06775 PF00083 Sugar (and other) transporter M1S54_RS06800 PF00155 Aminotransferase class I and II M1S54_RS06810 PF13610 DDE domain M1S54_RS06825 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS06835 PF00893 Small Multidrug Resistance protein M1S54_RS06840 PF00809 Pterin binding enzyme M1S54_RS06855 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S54_RS06870 PF12848 ABC transporter M1S54_RS06870 PF00005 ABC transporter M1S54_RS06875 PF01636 Phosphotransferase enzyme family M1S54_RS06885 PF13817 IS66 C-terminal element M1S54_RS06885 PF13005 zinc-finger binding domain of transposase IS66 M1S54_RS06885 PF13007 Transposase C of IS166 homeodomain M1S54_RS06885 PF03050 Transposase IS66 family M1S54_RS06900 PF13610 DDE domain M1S54_RS06915 PF00375 Sodium:dicarboxylate symporter family M1S54_RS06925 PF00753 Metallo-beta-lactamase superfamily M1S54_RS06925 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S54_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS06935 PF09383 NIL domain M1S54_RS06935 PF00005 ABC transporter M1S54_RS06940 PF03180 NLPA lipoprotein M1S54_RS06945 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S54_RS06945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S54_RS06945 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S54_RS06950 PF02142 MGS-like domain M1S54_RS06950 PF01808 AICARFT/IMPCHase bienzyme M1S54_RS06955 PF02954 Bacterial regulatory protein, Fis family M1S54_RS06975 PF13932 GidA associated domain M1S54_RS06975 PF01134 Glucose inhibited division protein A M1S54_RS06985 PF14403 Circularly permuted ATP-grasp type 2 M1S54_RS06995 PF08379 Bacterial transglutaminase-like N-terminal region M1S54_RS06995 PF01841 Transglutaminase-like superfamily M1S54_RS07005 PF00842 Alanine racemase, C-terminal domain M1S54_RS07005 PF01168 Alanine racemase, N-terminal domain M1S54_RS07010 PF00772 DnaB-like helicase N terminal domain M1S54_RS07010 PF03796 DnaB-like helicase C terminal domain M1S54_RS07015 PF03948 Ribosomal protein L9, C-terminal domain M1S54_RS07015 PF01281 Ribosomal protein L9, N-terminal domain M1S54_RS07020 PF01084 Ribosomal protein S18 M1S54_RS07025 PF01250 Ribosomal protein S6 M1S54_RS07030 PF01040 UbiA prenyltransferase family M1S54_RS07035 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S54_RS07040 PF00510 Cytochrome c oxidase subunit III M1S54_RS07045 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S54_RS07050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S54_RS07050 PF06481 COX Aromatic Rich Motif M1S54_RS07060 PF00391 PEP-utilising enzyme, mobile domain M1S54_RS07060 PF02896 PEP-utilising enzyme, TIM barrel domain M1S54_RS07060 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S54_RS07065 PF03618 Kinase/pyrophosphorylase M1S54_RS07075 PF01522 Polysaccharide deacetylase M1S54_RS07075 PF14883 Hypothetical glycosyl hydrolase family 13 M1S54_RS07080 PF00535 Glycosyl transferase family 2 M1S54_RS07085 PF13994 PgaD-like protein M1S54_RS07095 PF00296 Luciferase-like monooxygenase M1S54_RS07110 PF03466 LysR substrate binding domain M1S54_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS07120 PF03462 PCRF domain M1S54_RS07120 PF00472 RF-1 domain M1S54_RS07125 PF17827 PrmC N-terminal domain M1S54_RS07125 PF13847 Methyltransferase domain M1S54_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS07135 PF09084 NMT1/THI5 like M1S54_RS07140 PF12833 Helix-turn-helix domain M1S54_RS07145 PF00106 short chain dehydrogenase M1S54_RS07150 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS07150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS07150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS07155 PF00501 AMP-binding enzyme M1S54_RS07155 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS07160 PF01613 Flavin reductase like domain M1S54_RS07165 PF00899 ThiF family M1S54_RS07170 PF03109 ABC1 family M1S54_RS07185 PF03814 Potassium-transporting ATPase A subunit M1S54_RS07195 PF02669 K+-transporting ATPase, c chain M1S54_RS07200 PF13493 Domain of unknown function (DUF4118) M1S54_RS07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS07200 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS07200 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S54_RS07205 PF00072 Response regulator receiver domain M1S54_RS07205 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS07210 PF00120 Glutamine synthetase, catalytic domain M1S54_RS07220 PF03232 Ubiquinone biosynthesis protein COQ7 M1S54_RS07225 PF07690 Major Facilitator Superfamily M1S54_RS07230 PF01103 Surface antigen M1S54_RS07230 PF07244 Surface antigen variable number repeat M1S54_RS07230 PF17243 POTRA domain TamA domain 1 M1S54_RS07245 PF00330 Aconitase family (aconitate hydratase) M1S54_RS07245 PF06434 Aconitate hydratase 2 N-terminus M1S54_RS07245 PF11791 Aconitate B N-terminal domain M1S54_RS07255 PF00027 Cyclic nucleotide-binding domain M1S54_RS07255 PF00520 Ion transport protein M1S54_RS07260 PF07690 Major Facilitator Superfamily M1S54_RS07355 PF10124 Mu-like prophage major head subunit gpT M1S54_RS07370 PF05069 Phage virion morphogenesis family M1S54_RS07375 PF04233 Phage Mu protein F like protein M1S54_RS07380 PF06074 Protein of unknown function (DUF935) M1S54_RS07395 PF03237 Terminase-like family M1S54_RS07400 PF11985 Protein of unknown function (DUF3486) M1S54_RS07430 PF10502 Signal peptidase, peptidase S26 M1S54_RS07460 PF01471 Putative peptidoglycan binding domain M1S54_RS07460 PF13401 AAA domain M1S54_RS07490 PF00216 Bacterial DNA-binding protein M1S54_RS07535 PF03466 LysR substrate binding domain M1S54_RS07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS07540 PF04284 Protein of unknown function (DUF441) M1S54_RS07550 PF00849 RNA pseudouridylate synthase M1S54_RS07550 PF01479 S4 domain M1S54_RS07565 PF01479 S4 domain M1S54_RS07565 PF00849 RNA pseudouridylate synthase M1S54_RS07570 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S54_RS07575 PF08676 MutL C terminal dimerisation domain M1S54_RS07575 PF01119 DNA mismatch repair protein, C-terminal domain M1S54_RS07585 PF17209 Hfq protein M1S54_RS07595 PF00881 Nitroreductase family M1S54_RS07605 PF00149 Calcineurin-like phosphoesterase M1S54_RS07610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S54_RS07615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S54_RS07615 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S54_RS07620 PF00117 Glutamine amidotransferase class-I M1S54_RS07620 PF00958 GMP synthase C terminal domain M1S54_RS07620 PF02540 NAD synthase M1S54_RS07625 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S54_RS07630 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S54_RS07635 PF13520 Amino acid permease M1S54_RS07640 PF00171 Aldehyde dehydrogenase family M1S54_RS07655 PF00465 Iron-containing alcohol dehydrogenase M1S54_RS07660 PF14493 Helix-turn-helix domain M1S54_RS07660 PF05970 PIF1-like helicase M1S54_RS07670 PF06445 GyrI-like small molecule binding domain M1S54_RS07675 PF02110 Hydroxyethylthiazole kinase family M1S54_RS07690 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S54_RS07690 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S54_RS07690 PF01433 Peptidase family M1 domain M1S54_RS07700 PF00106 short chain dehydrogenase M1S54_RS07710 PF01817 Chorismate mutase type II M1S54_RS07715 PF01037 Lrp/AsnC ligand binding domain M1S54_RS07730 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS07735 PF00593 TonB dependent receptor M1S54_RS07735 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS07740 PF00924 Mechanosensitive ion channel M1S54_RS07795 PF00005 ABC transporter M1S54_RS07795 PF12848 ABC transporter M1S54_RS07800 PF00582 Universal stress protein family M1S54_RS07825 PF00690 Cation transporter/ATPase, N-terminus M1S54_RS07825 PF00689 Cation transporting ATPase, C-terminus M1S54_RS07830 PF02308 MgtC family M1S54_RS07835 PF03594 Benzoate membrane transport protein M1S54_RS07840 PF01037 Lrp/AsnC ligand binding domain M1S54_RS07845 PF01810 LysE type translocator M1S54_RS07850 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S54_RS07855 PF03466 LysR substrate binding domain M1S54_RS07855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS07865 PF02803 Thiolase, C-terminal domain M1S54_RS07865 PF00108 Thiolase, N-terminal domain M1S54_RS07875 PF01575 MaoC like domain M1S54_RS07880 PF00144 Beta-lactamase M1S54_RS07890 PF07690 Major Facilitator Superfamily M1S54_RS07895 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S54_RS07895 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S54_RS07895 PF12169 DNA polymerase III subunits gamma and tau domain III M1S54_RS07900 PF04185 Phosphoesterase family M1S54_RS07900 PF05506 Domain of unknown function (DUF756) M1S54_RS07905 PF03061 Thioesterase superfamily M1S54_RS07910 PF00465 Iron-containing alcohol dehydrogenase M1S54_RS07920 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S54_RS07925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S54_RS07925 PF01565 FAD binding domain M1S54_RS07940 PF01645 Conserved region in glutamate synthase M1S54_RS07960 PF12832 MFS_1 like family M1S54_RS07970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S54_RS07970 PF02785 Biotin carboxylase C-terminal domain M1S54_RS07970 PF00289 Biotin carboxylase, N-terminal domain M1S54_RS07975 PF00364 Biotin-requiring enzyme M1S54_RS07980 PF01220 Dehydroquinase class II M1S54_RS07985 PF13438 Domain of unknown function (DUF4113) M1S54_RS07985 PF11799 impB/mucB/samB family C-terminal domain M1S54_RS07985 PF00817 impB/mucB/samB family M1S54_RS07995 PF00005 ABC transporter M1S54_RS08000 PF00072 Response regulator receiver domain M1S54_RS08000 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS08010 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS08010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S54_RS08010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S54_RS08010 PF13806 Rieske-like [2Fe-2S] domain M1S54_RS08010 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S54_RS08010 PF04324 BFD-like [2Fe-2S] binding domain M1S54_RS08015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S54_RS08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS08015 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S54_RS08015 PF04324 BFD-like [2Fe-2S] binding domain M1S54_RS08015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S54_RS08020 PF04324 BFD-like [2Fe-2S] binding domain M1S54_RS08020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S54_RS08020 PF00384 Molybdopterin oxidoreductase M1S54_RS08020 PF01568 Molydopterin dinucleotide binding domain M1S54_RS08025 PF12804 MobA-like NTP transferase domain M1S54_RS08030 PF00384 Molybdopterin oxidoreductase M1S54_RS08030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S54_RS08030 PF01568 Molydopterin dinucleotide binding domain M1S54_RS08035 PF06463 Molybdenum Cofactor Synthesis C M1S54_RS08035 PF04055 Radical SAM superfamily M1S54_RS08045 PF02391 MoaE protein M1S54_RS08050 PF01967 MoaC family M1S54_RS08050 PF00994 Probable molybdopterin binding domain M1S54_RS08055 PF00994 Probable molybdopterin binding domain M1S54_RS08055 PF03454 MoeA C-terminal region (domain IV) M1S54_RS08055 PF03453 MoeA N-terminal region (domain I and II) M1S54_RS08060 PF01638 HxlR-like helix-turn-helix M1S54_RS08065 PF00155 Aminotransferase class I and II M1S54_RS08065 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS08070 PF00892 EamA-like transporter family M1S54_RS08090 PF02635 DsrE/DsrF-like family M1S54_RS08095 PF16363 GDP-mannose 4,6 dehydratase M1S54_RS08100 PF10415 Fumarase C C-terminus M1S54_RS08100 PF00206 Lyase M1S54_RS08120 PF01266 FAD dependent oxidoreductase M1S54_RS08130 PF02542 YgbB family M1S54_RS08140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S54_RS08140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S54_RS08160 PF00158 Sigma-54 interaction domain M1S54_RS08160 PF00072 Response regulator receiver domain M1S54_RS08160 PF02954 Bacterial regulatory protein, Fis family M1S54_RS08165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS08165 PF00989 PAS fold M1S54_RS08165 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS08170 PF18693 TRAM domain M1S54_RS08170 PF04055 Radical SAM superfamily M1S54_RS08170 PF00919 Uncharacterized protein family UPF0004 M1S54_RS08175 PF00696 Amino acid kinase family M1S54_RS08180 PF01765 Ribosome recycling factor M1S54_RS08185 PF01255 Putative undecaprenyl diphosphate synthase M1S54_RS08195 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S54_RS08195 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S54_RS08195 PF13288 DXP reductoisomerase C-terminal domain M1S54_RS08205 PF01103 Surface antigen M1S54_RS08205 PF07244 Surface antigen variable number repeat M1S54_RS08215 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S54_RS08215 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS08220 PF07977 FabA-like domain M1S54_RS08225 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS08225 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S54_RS08240 PF02631 RecX family M1S54_RS08245 PF00154 recA bacterial DNA recombination protein M1S54_RS08250 PF01479 S4 domain M1S54_RS08255 PF13419 Haloacid dehalogenase-like hydrolase M1S54_RS08280 PF01037 Lrp/AsnC ligand binding domain M1S54_RS08285 PF00266 Aminotransferase class-V M1S54_RS08290 PF00324 Amino acid permease M1S54_RS08305 PF05922 Peptidase inhibitor I9 M1S54_RS08305 PF00082 Subtilase family M1S54_RS08310 PF01740 STAS domain M1S54_RS08310 PF00916 Sulfate permease family M1S54_RS08315 PF02586 SOS response associated peptidase (SRAP) M1S54_RS08320 PF07995 Glucose / Sorbosone dehydrogenase M1S54_RS08330 PF03707 Bacterial signalling protein N terminal repeat M1S54_RS08330 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS08330 PF00563 EAL domain M1S54_RS08350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S54_RS08350 PF02378 Phosphotransferase system, EIIC M1S54_RS08355 PF00294 pfkB family carbohydrate kinase M1S54_RS08360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S54_RS08360 PF00381 PTS HPr component phosphorylation site M1S54_RS08360 PF02896 PEP-utilising enzyme, TIM barrel domain M1S54_RS08360 PF00391 PEP-utilising enzyme, mobile domain M1S54_RS08360 PF05524 PEP-utilising enzyme, N-terminal M1S54_RS08385 PF05525 Branched-chain amino acid transport protein M1S54_RS08390 PF00557 Metallopeptidase family M24 M1S54_RS08395 PF03466 LysR substrate binding domain M1S54_RS08395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS08405 PF00462 Glutaredoxin M1S54_RS08410 PF00202 Aminotransferase class-III M1S54_RS08415 PF00478 IMP dehydrogenase / GMP reductase domain M1S54_RS08415 PF00571 CBS domain M1S54_RS08440 PF02881 SRP54-type protein, helical bundle domain M1S54_RS08440 PF00448 SRP54-type protein, GTPase domain M1S54_RS08450 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S54_RS08465 PF08173 Membrane bound YbgT-like protein M1S54_RS08470 PF02322 Cytochrome bd terminal oxidase subunit II M1S54_RS08475 PF01654 Cytochrome bd terminal oxidase subunit I M1S54_RS08485 PF07290 Protein of unknown function (DUF1449) M1S54_RS08495 PF00294 pfkB family carbohydrate kinase M1S54_RS08500 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS08500 PF00593 TonB dependent receptor M1S54_RS08505 PF08367 Peptidase M16C associated M1S54_RS08505 PF00675 Insulinase (Peptidase family M16) M1S54_RS08505 PF05193 Peptidase M16 inactive domain M1S54_RS08510 PF02253 Phospholipase A1 M1S54_RS08515 PF02386 Cation transport protein M1S54_RS08520 PF02080 TrkA-C domain M1S54_RS08520 PF02254 TrkA-N domain M1S54_RS08525 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S54_RS08525 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS08530 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S54_RS08545 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S54_RS08545 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S54_RS08555 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S54_RS08560 PF17871 AAA lid domain M1S54_RS08560 PF02861 Clp amino terminal domain, pathogenicity island component M1S54_RS08560 PF10431 C-terminal, D2-small domain, of ClpB protein M1S54_RS08560 PF00004 ATPase family associated with various cellular activities (AAA) M1S54_RS08560 PF07724 AAA domain (Cdc48 subfamily) M1S54_RS08565 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S54_RS08570 PF00793 DAHP synthetase I family M1S54_RS08585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S54_RS08585 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS08615 PF06418 CTP synthase N-terminus M1S54_RS08615 PF00117 Glutamine amidotransferase class-I M1S54_RS08620 PF00793 DAHP synthetase I family M1S54_RS08625 PF00113 Enolase, C-terminal TIM barrel domain M1S54_RS08625 PF03952 Enolase, N-terminal domain M1S54_RS08630 PF04239 Protein of unknown function (DUF421) M1S54_RS08635 PF04977 Septum formation initiator M1S54_RS08640 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S54_RS08645 PF01144 Coenzyme A transferase M1S54_RS08650 PF01144 Coenzyme A transferase M1S54_RS08655 PF00108 Thiolase, N-terminal domain M1S54_RS08655 PF02803 Thiolase, C-terminal domain M1S54_RS08660 PF10397 Adenylosuccinate lyase C-terminus M1S54_RS08660 PF00206 Lyase M1S54_RS08665 PF00561 alpha/beta hydrolase fold M1S54_RS08670 PF07690 Major Facilitator Superfamily M1S54_RS08675 PF02627 Carboxymuconolactone decarboxylase family M1S54_RS08680 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S54_RS08680 PF00775 Dioxygenase M1S54_RS08685 PF00775 Dioxygenase M1S54_RS08690 PF01487 Type I 3-dehydroquinase M1S54_RS08695 PF05048 Periplasmic copper-binding protein (NosD) M1S54_RS08700 PF04966 Carbohydrate-selective porin, OprB family M1S54_RS08705 PF01011 PQQ enzyme repeat M1S54_RS08705 PF13360 PQQ-like domain M1S54_RS08715 PF04143 Sulphur transport M1S54_RS08725 PF00753 Metallo-beta-lactamase superfamily M1S54_RS08730 PF09339 IclR helix-turn-helix domain M1S54_RS08730 PF01614 Bacterial transcriptional regulator M1S54_RS08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS08735 PF03466 LysR substrate binding domain M1S54_RS08755 PF00106 short chain dehydrogenase M1S54_RS08765 PF07690 Major Facilitator Superfamily M1S54_RS08775 PF01425 Amidase M1S54_RS08780 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS08795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S54_RS08795 PF00355 Rieske [2Fe-2S] domain M1S54_RS08810 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS08810 PF00175 Oxidoreductase NAD-binding domain M1S54_RS08815 PF01613 Flavin reductase like domain M1S54_RS08820 PF02311 AraC-like ligand binding domain M1S54_RS08820 PF12833 Helix-turn-helix domain M1S54_RS08825 PF02728 Copper amine oxidase, N3 domain M1S54_RS08825 PF02727 Copper amine oxidase, N2 domain M1S54_RS08825 PF07833 Copper amine oxidase N-terminal domain M1S54_RS08825 PF01179 Copper amine oxidase, enzyme domain M1S54_RS08835 PF00171 Aldehyde dehydrogenase family M1S54_RS08840 PF01804 Penicillin amidase M1S54_RS08845 PF12146 Serine aminopeptidase, S33 M1S54_RS08850 PF02803 Thiolase, C-terminal domain M1S54_RS08850 PF00108 Thiolase, N-terminal domain M1S54_RS08855 PF01144 Coenzyme A transferase M1S54_RS08860 PF01144 Coenzyme A transferase M1S54_RS08865 PF00775 Dioxygenase M1S54_RS08865 PF04444 Catechol dioxygenase N terminus M1S54_RS08870 PF02426 Muconolactone delta-isomerase M1S54_RS08875 PF13378 Enolase C-terminal domain-like M1S54_RS08875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S54_RS08880 PF03466 LysR substrate binding domain M1S54_RS08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS08890 PF07729 FCD domain M1S54_RS08890 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS08895 PF00920 Dehydratase family M1S54_RS08900 PF07690 Major Facilitator Superfamily M1S54_RS08910 PF00171 Aldehyde dehydrogenase family M1S54_RS08930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS08930 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS08930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS08940 PF02954 Bacterial regulatory protein, Fis family M1S54_RS08940 PF06506 Propionate catabolism activator M1S54_RS08940 PF00158 Sigma-54 interaction domain M1S54_RS08945 PF00501 AMP-binding enzyme M1S54_RS08945 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS08950 PF04341 Protein of unknown function, DUF485 M1S54_RS08955 PF00474 Sodium:solute symporter family M1S54_RS08960 PF00107 Zinc-binding dehydrogenase M1S54_RS08960 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS08965 PF00171 Aldehyde dehydrogenase family M1S54_RS08975 PF00561 alpha/beta hydrolase fold M1S54_RS08980 PF00199 Catalase M1S54_RS08980 PF06628 Catalase-related immune-responsive M1S54_RS08995 PF07859 alpha/beta hydrolase fold M1S54_RS09000 PF01047 MarR family M1S54_RS09005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S54_RS09005 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS09010 PF00106 short chain dehydrogenase M1S54_RS09015 PF01872 RibD C-terminal domain M1S54_RS09020 PF00376 MerR family regulatory protein M1S54_RS09020 PF09278 MerR, DNA binding M1S54_RS09030 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS09040 PF12706 Beta-lactamase superfamily domain M1S54_RS09045 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS09045 PF08359 YsiA-like protein, C-terminal region M1S54_RS09055 PF00857 Isochorismatase family M1S54_RS09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS09060 PF03466 LysR substrate binding domain M1S54_RS09065 PF07995 Glucose / Sorbosone dehydrogenase M1S54_RS09070 PF00999 Sodium/hydrogen exchanger family M1S54_RS09070 PF02254 TrkA-N domain M1S54_RS09080 PF01546 Peptidase family M20/M25/M40 M1S54_RS09080 PF07687 Peptidase dimerisation domain M1S54_RS09090 PF08479 POTRA domain, ShlB-type M1S54_RS09090 PF17287 POTRA domain M1S54_RS09090 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S54_RS09095 PF13332 Hemagglutinin repeat M1S54_RS09095 PF13018 Extended Signal Peptide of Type V secretion system M1S54_RS09095 PF05860 haemagglutination activity domain M1S54_RS09095 PF04829 Pre-toxin domain with VENN motif M1S54_RS09110 PF07690 Major Facilitator Superfamily M1S54_RS09115 PF04909 Amidohydrolase M1S54_RS09125 PF07702 UTRA domain M1S54_RS09125 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS09130 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S54_RS09140 PF03466 LysR substrate binding domain M1S54_RS09140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS09160 PF07690 Major Facilitator Superfamily M1S54_RS09165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S54_RS09165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S54_RS09165 PF01842 ACT domain M1S54_RS09170 PF03737 Aldolase/RraA M1S54_RS09200 PF00529 HlyD membrane-fusion protein of T1SS M1S54_RS09200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S54_RS09215 PF00171 Aldehyde dehydrogenase family M1S54_RS09220 PF00920 Dehydratase family M1S54_RS09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS09230 PF03466 LysR substrate binding domain M1S54_RS09235 PF01370 NAD dependent epimerase/dehydratase family M1S54_RS09240 PF07690 Major Facilitator Superfamily M1S54_RS09245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S54_RS09245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S54_RS09250 PF06719 AraC-type transcriptional regulator N-terminus M1S54_RS09250 PF12833 Helix-turn-helix domain M1S54_RS09265 PF00107 Zinc-binding dehydrogenase M1S54_RS09265 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS09275 PF01032 FecCD transport family M1S54_RS09280 PF00005 ABC transporter M1S54_RS09300 PF14572 Phosphoribosyl synthetase-associated domain M1S54_RS09300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S54_RS09305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S54_RS09380 PF00196 Bacterial regulatory proteins, luxR family M1S54_RS09385 PF01425 Amidase M1S54_RS09390 PF13533 Biotin-lipoyl like M1S54_RS09395 PF07690 Major Facilitator Superfamily M1S54_RS09420 PF01975 Survival protein SurE M1S54_RS09430 PF13291 ACT domain M1S54_RS09430 PF04607 Region found in RelA / SpoT proteins M1S54_RS09430 PF02824 TGS domain M1S54_RS09480 PF12146 Serine aminopeptidase, S33 M1S54_RS09485 PF02311 AraC-like ligand binding domain M1S54_RS09485 PF12833 Helix-turn-helix domain M1S54_RS09495 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S54_RS09495 PF00672 HAMP domain M1S54_RS09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS09495 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS09500 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS09500 PF00072 Response regulator receiver domain M1S54_RS09505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S54_RS09505 PF00529 HlyD membrane-fusion protein of T1SS M1S54_RS09510 PF00873 AcrB/AcrD/AcrF family M1S54_RS09515 PF02321 Outer membrane efflux protein M1S54_RS09520 PF12146 Serine aminopeptidase, S33 M1S54_RS09525 PF00743 Flavin-binding monooxygenase-like M1S54_RS09530 PF01593 Flavin containing amine oxidoreductase M1S54_RS09545 PF01266 FAD dependent oxidoreductase M1S54_RS09565 PF16970 Type-1 fimbrial protein, A M1S54_RS09575 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S54_RS09575 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S54_RS09580 PF00577 Outer membrane usher protein M1S54_RS09580 PF13953 PapC C-terminal domain M1S54_RS09580 PF13954 PapC N-terminal domain M1S54_RS09585 PF00419 Fimbrial protein M1S54_RS09595 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS09595 PF00107 Zinc-binding dehydrogenase M1S54_RS09605 PF00199 Catalase M1S54_RS09620 PF13091 PLD-like domain M1S54_RS09640 PF01244 Membrane dipeptidase (Peptidase family M19) M1S54_RS09645 PF04055 Radical SAM superfamily M1S54_RS09645 PF13186 Iron-sulfur cluster-binding domain M1S54_RS09650 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S54_RS09655 PF03070 TENA/THI-4/PQQC family M1S54_RS09660 PF12706 Beta-lactamase superfamily domain M1S54_RS09665 PF08042 PqqA family M1S54_RS09670 PF13090 Polyphosphate kinase C-terminal domain 2 M1S54_RS09670 PF13089 Polyphosphate kinase N-terminal domain M1S54_RS09670 PF02503 Polyphosphate kinase middle domain M1S54_RS09670 PF17941 Polyphosphate kinase C-terminal domain 1 M1S54_RS09675 PF00149 Calcineurin-like phosphoesterase M1S54_RS09685 PF00857 Isochorismatase family M1S54_RS09685 PF00550 Phosphopantetheine attachment site M1S54_RS09690 PF00106 short chain dehydrogenase M1S54_RS09695 PF03459 TOBE domain M1S54_RS09695 PF00005 ABC transporter M1S54_RS09700 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS09710 PF03459 TOBE domain M1S54_RS09710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS09715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S54_RS09715 PF00355 Rieske [2Fe-2S] domain M1S54_RS09720 PF00866 Ring hydroxylating beta subunit M1S54_RS09725 PF00175 Oxidoreductase NAD-binding domain M1S54_RS09725 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS09725 PF00970 Oxidoreductase FAD-binding domain M1S54_RS09730 PF14525 AraC-binding-like domain M1S54_RS09730 PF12833 Helix-turn-helix domain M1S54_RS09740 PF01613 Flavin reductase like domain M1S54_RS09755 PF01738 Dienelactone hydrolase family M1S54_RS09760 PF07690 Major Facilitator Superfamily M1S54_RS09765 PF12833 Helix-turn-helix domain M1S54_RS09765 PF06719 AraC-type transcriptional regulator N-terminus M1S54_RS09790 PF03466 LysR substrate binding domain M1S54_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS09795 PF01144 Coenzyme A transferase M1S54_RS09800 PF01144 Coenzyme A transferase M1S54_RS09805 PF02667 Short chain fatty acid transporter M1S54_RS09810 PF02803 Thiolase, C-terminal domain M1S54_RS09810 PF00108 Thiolase, N-terminal domain M1S54_RS09815 PF03466 LysR substrate binding domain M1S54_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS09820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS09820 PF03466 LysR substrate binding domain M1S54_RS09835 PF10415 Fumarase C C-terminus M1S54_RS09835 PF00206 Lyase M1S54_RS09840 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS09840 PF00593 TonB dependent receptor M1S54_RS09845 PF00083 Sugar (and other) transporter M1S54_RS09860 PF00005 ABC transporter M1S54_RS09865 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS09870 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S54_RS09885 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS09885 PF07702 UTRA domain M1S54_RS09895 PF02525 Flavodoxin-like fold M1S54_RS09900 PF01638 HxlR-like helix-turn-helix M1S54_RS09905 PF06445 GyrI-like small molecule binding domain M1S54_RS09905 PF12833 Helix-turn-helix domain M1S54_RS09920 PF01925 Sulfite exporter TauE/SafE M1S54_RS09935 PF04273 Putative phosphatase (DUF442) M1S54_RS09935 PF00753 Metallo-beta-lactamase superfamily M1S54_RS09940 PF02954 Bacterial regulatory protein, Fis family M1S54_RS09940 PF00072 Response regulator receiver domain M1S54_RS09940 PF00158 Sigma-54 interaction domain M1S54_RS09945 PF01062 Bestrophin, RFP-TM, chloride channel M1S54_RS09950 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS09950 PF00107 Zinc-binding dehydrogenase M1S54_RS09955 PF00106 short chain dehydrogenase M1S54_RS09960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S54_RS09960 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS09965 PF02817 e3 binding domain M1S54_RS09965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S54_RS09965 PF00364 Biotin-requiring enzyme M1S54_RS09970 PF02780 Transketolase, C-terminal domain M1S54_RS09970 PF02779 Transketolase, pyrimidine binding domain M1S54_RS09975 PF00676 Dehydrogenase E1 component M1S54_RS09980 PF04055 Radical SAM superfamily M1S54_RS09995 PF08448 PAS fold M1S54_RS09995 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS10000 PF01264 Chorismate synthase M1S54_RS10005 PF05175 Methyltransferase small domain M1S54_RS10010 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS10020 PF01434 Peptidase family M41 M1S54_RS10020 PF17862 AAA+ lid domain M1S54_RS10020 PF00004 ATPase family associated with various cellular activities (AAA) M1S54_RS10030 PF05166 YcgL domain M1S54_RS10050 PF01612 3'-5' exonuclease M1S54_RS10050 PF00570 HRDC domain M1S54_RS10055 PF02132 RecR protein M1S54_RS10055 PF13662 Toprim domain M1S54_RS10060 PF02575 YbaB/EbfC DNA-binding family M1S54_RS10070 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S54_RS10075 PF00561 alpha/beta hydrolase fold M1S54_RS10080 PF08241 Methyltransferase domain M1S54_RS10110 PF01230 HIT domain M1S54_RS10145 PF00005 ABC transporter M1S54_RS10150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S54_RS10160 PF02684 Lipid-A-disaccharide synthetase M1S54_RS10165 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS10165 PF00593 TonB dependent receptor M1S54_RS10185 PF01925 Sulfite exporter TauE/SafE M1S54_RS10190 PF00793 DAHP synthetase I family M1S54_RS10195 PF02654 Cobalamin-5-phosphate synthase M1S54_RS10210 PF02277 Phosphoribosyltransferase M1S54_RS10215 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S54_RS10225 PF13419 Haloacid dehalogenase-like hydrolase M1S54_RS10250 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS10250 PF00593 TonB dependent receptor M1S54_RS10265 PF04183 IucA / IucC family M1S54_RS10265 PF06276 Ferric iron reductase FhuF-like transporter M1S54_RS10270 PF06276 Ferric iron reductase FhuF-like transporter M1S54_RS10270 PF04183 IucA / IucC family M1S54_RS10275 PF07690 Major Facilitator Superfamily M1S54_RS10280 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S54_RS10285 PF06276 Ferric iron reductase FhuF-like transporter M1S54_RS10285 PF04183 IucA / IucC family M1S54_RS10290 PF04073 Aminoacyl-tRNA editing domain M1S54_RS10305 PF03109 ABC1 family M1S54_RS10310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS10310 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS10310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS10315 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS10315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS10315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS10320 PF00487 Fatty acid desaturase M1S54_RS10325 PF12852 Cupin M1S54_RS10325 PF12833 Helix-turn-helix domain M1S54_RS10330 PF00639 PPIC-type PPIASE domain M1S54_RS10330 PF09312 SurA N-terminal domain M1S54_RS10335 PF00216 Bacterial DNA-binding protein M1S54_RS10350 PF02082 Transcriptional regulator M1S54_RS10355 PF00266 Aminotransferase class-V M1S54_RS10360 PF01592 NifU-like N terminal domain M1S54_RS10365 PF01521 Iron-sulphur cluster biosynthesis M1S54_RS10370 PF07743 HSCB C-terminal oligomerisation domain M1S54_RS10370 PF00226 DnaJ domain M1S54_RS10375 PF00012 Hsp70 protein M1S54_RS10380 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS10385 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S54_RS10395 PF02559 CarD-like/TRCF domain M1S54_RS10395 PF00270 DEAD/DEAH box helicase M1S54_RS10395 PF00271 Helicase conserved C-terminal domain M1S54_RS10395 PF17757 UvrB interaction domain M1S54_RS10395 PF03461 TRCF domain M1S54_RS10415 PF03737 Aldolase/RraA M1S54_RS10420 PF13460 NAD(P)H-binding M1S54_RS10425 PF01649 Ribosomal protein S20 M1S54_RS10435 PF00459 Inositol monophosphatase family M1S54_RS10450 PF00005 ABC transporter M1S54_RS10450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S54_RS10455 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS10460 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS10465 PF01432 Peptidase family M3 M1S54_RS10505 PF01618 MotA/TolQ/ExbB proton channel family M1S54_RS10510 PF02472 Biopolymer transport protein ExbD/TolR M1S54_RS10515 PF02472 Biopolymer transport protein ExbD/TolR M1S54_RS10525 PF01274 Malate synthase M1S54_RS10530 PF03969 AFG1-like ATPase M1S54_RS10540 PF00743 Flavin-binding monooxygenase-like M1S54_RS10550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S54_RS10560 PF00216 Bacterial DNA-binding protein M1S54_RS10565 PF00575 S1 RNA binding domain M1S54_RS10570 PF02224 Cytidylate kinase M1S54_RS10580 PF14437 MafB19-like deaminase M1S54_RS10590 PF03167 Uracil DNA glycosylase superfamily M1S54_RS10600 PF03934 Type II secretion system (T2SS), protein K M1S54_RS10605 PF11612 Type II secretion system (T2SS), protein J M1S54_RS10605 PF07963 Prokaryotic N-terminal methylation motif M1S54_RS10610 PF02501 Type II secretion system (T2SS), protein I M1S54_RS10610 PF07963 Prokaryotic N-terminal methylation motif M1S54_RS10625 PF01026 TatD related DNase M1S54_RS10635 PF09115 DNA polymerase III, delta subunit, C terminal M1S54_RS10640 PF02348 Cytidylyltransferase M1S54_RS10645 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S54_RS10650 PF00664 ABC transporter transmembrane region M1S54_RS10650 PF00005 ABC transporter M1S54_RS10660 PF01618 MotA/TolQ/ExbB proton channel family M1S54_RS10665 PF02195 ParB-like nuclease domain M1S54_RS10665 PF17762 HTH domain found in ParB protein M1S54_RS10670 PF13614 AAA domain M1S54_RS10675 PF02527 rRNA small subunit methyltransferase G M1S54_RS10680 PF00483 Nucleotidyl transferase M1S54_RS10685 PF01636 Phosphotransferase enzyme family M1S54_RS10690 PF04453 LPS transport system D M1S54_RS10690 PF03968 OstA-like protein M1S54_RS10695 PF00639 PPIC-type PPIASE domain M1S54_RS10695 PF09312 SurA N-terminal domain M1S54_RS10700 PF01116 Fructose-bisphosphate aldolase class-II M1S54_RS10710 PF00162 Phosphoglycerate kinase M1S54_RS10720 PF02545 Maf-like protein M1S54_RS10725 PF08007 Cupin superfamily protein M1S54_RS10740 PF00375 Sodium:dicarboxylate symporter family M1S54_RS10745 PF06912 Protein of unknown function (DUF1275) M1S54_RS10750 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S54_RS10755 PF00005 ABC transporter M1S54_RS10755 PF00664 ABC transporter transmembrane region M1S54_RS10765 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S54_RS10765 PF12833 Helix-turn-helix domain M1S54_RS10770 PF01597 Glycine cleavage H-protein M1S54_RS10775 PF02146 Sir2 family M1S54_RS10780 PF00474 Sodium:solute symporter family M1S54_RS10785 PF01037 Lrp/AsnC ligand binding domain M1S54_RS10790 PF14850 DNA-binding domain of Proline dehydrogenase M1S54_RS10790 PF01619 Proline dehydrogenase M1S54_RS10790 PF00171 Aldehyde dehydrogenase family M1S54_RS10790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S54_RS10795 PF04229 GrpB protein M1S54_RS10800 PF05958 tRNA (Uracil-5-)-methyltransferase M1S54_RS10810 PF09992 Phosphodiester glycosidase M1S54_RS10820 PF04264 YceI-like domain M1S54_RS10835 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S54_RS10835 PF02772 S-adenosylmethionine synthetase, central domain M1S54_RS10835 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S54_RS10855 PF00905 Penicillin binding protein transpeptidase domain M1S54_RS10870 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S54_RS10875 PF03853 YjeF-related protein N-terminus M1S54_RS10875 PF01256 Carbohydrate kinase M1S54_RS10880 PF08331 Domain of unknown function (DUF1730) M1S54_RS10885 PF06968 Biotin and Thiamin Synthesis associated domain M1S54_RS10885 PF04055 Radical SAM superfamily M1S54_RS10900 PF16970 Type-1 fimbrial protein, A M1S54_RS10905 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S54_RS10905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S54_RS10910 PF00577 Outer membrane usher protein M1S54_RS10910 PF13953 PapC C-terminal domain M1S54_RS10910 PF13954 PapC N-terminal domain M1S54_RS10930 PF00892 EamA-like transporter family M1S54_RS10940 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S54_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS10950 PF03466 LysR substrate binding domain M1S54_RS10970 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS10980 PF01709 Transcriptional regulator M1S54_RS10985 PF01037 Lrp/AsnC ligand binding domain M1S54_RS11000 PF00005 ABC transporter M1S54_RS11005 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS11010 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS11025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS11025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS11035 PF00296 Luciferase-like monooxygenase M1S54_RS11040 PF03180 NLPA lipoprotein M1S54_RS11060 PF00005 ABC transporter M1S54_RS11060 PF09383 NIL domain M1S54_RS11065 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS11070 PF01926 50S ribosome-binding GTPase M1S54_RS11070 PF06071 Protein of unknown function (DUF933) M1S54_RS11095 PF03591 AzlC protein M1S54_RS11100 PF05437 Branched-chain amino acid transport protein (AzlD) M1S54_RS11110 PF02222 ATP-grasp domain M1S54_RS11115 PF01966 HD domain M1S54_RS11115 PF08335 GlnD PII-uridylyltransferase M1S54_RS11115 PF01909 Nucleotidyltransferase domain M1S54_RS11120 PF00155 Aminotransferase class I and II M1S54_RS11130 PF12833 Helix-turn-helix domain M1S54_RS11130 PF12852 Cupin M1S54_RS11135 PF00255 Glutathione peroxidase M1S54_RS11140 PF01641 SelR domain M1S54_RS11145 PF00155 Aminotransferase class I and II M1S54_RS11150 PF00375 Sodium:dicarboxylate symporter family M1S54_RS11155 PF00710 Asparaginase, N-terminal M1S54_RS11155 PF17763 Glutaminase/Asparaginase C-terminal domain M1S54_RS11160 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S54_RS11160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S54_RS11160 PF14579 Helix-hairpin-helix motif M1S54_RS11160 PF01336 OB-fold nucleic acid binding domain M1S54_RS11160 PF02811 PHP domain M1S54_RS11165 PF00588 SpoU rRNA Methylase family M1S54_RS11170 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS11185 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS11185 PF13192 Thioredoxin domain M1S54_RS11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11200 PF03466 LysR substrate binding domain M1S54_RS11205 PF01758 Sodium Bile acid symporter family M1S54_RS11210 PF01022 Bacterial regulatory protein, arsR family M1S54_RS11215 PF03960 ArsC family M1S54_RS11225 PF13382 Adenine deaminase C-terminal domain M1S54_RS11225 PF01979 Amidohydrolase family M1S54_RS11255 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S54_RS11260 PF01177 Asp/Glu/Hydantoin racemase M1S54_RS11265 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S54_RS11270 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS11275 PF00005 ABC transporter M1S54_RS11280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S54_RS11290 PF00083 Sugar (and other) transporter M1S54_RS11295 PF00296 Luciferase-like monooxygenase M1S54_RS11300 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS11300 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS11300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS11310 PF01654 Cytochrome bd terminal oxidase subunit I M1S54_RS11315 PF02322 Cytochrome bd terminal oxidase subunit II M1S54_RS11325 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS11325 PF00155 Aminotransferase class I and II M1S54_RS11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11330 PF03466 LysR substrate binding domain M1S54_RS11345 PF00698 Acyl transferase domain M1S54_RS11350 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S54_RS11360 PF01039 Carboxyl transferase domain M1S54_RS11365 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S54_RS11370 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S54_RS11375 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S54_RS11380 PF07690 Major Facilitator Superfamily M1S54_RS11395 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS11395 PF00155 Aminotransferase class I and II M1S54_RS11400 PF04172 LrgB-like family M1S54_RS11405 PF03788 LrgA family M1S54_RS11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11410 PF03466 LysR substrate binding domain M1S54_RS11415 PF14834 Glutathione S-transferase, C-terminal domain M1S54_RS11415 PF02798 Glutathione S-transferase, N-terminal domain M1S54_RS11420 PF02798 Glutathione S-transferase, N-terminal domain M1S54_RS11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11425 PF03466 LysR substrate binding domain M1S54_RS11435 PF00581 Rhodanese-like domain M1S54_RS11440 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS11450 PF00266 Aminotransferase class-V M1S54_RS11460 PF01810 LysE type translocator M1S54_RS11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11465 PF03466 LysR substrate binding domain M1S54_RS11475 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S54_RS11480 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S54_RS11485 PF00005 ABC transporter M1S54_RS11490 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS11495 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS11510 PF00072 Response regulator receiver domain M1S54_RS11515 PF00072 Response regulator receiver domain M1S54_RS11515 PF09308 LuxQ, periplasmic M1S54_RS11515 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS11515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS11525 PF13404 AsnC-type helix-turn-helix domain M1S54_RS11525 PF01037 Lrp/AsnC ligand binding domain M1S54_RS11535 PF00717 Peptidase S24-like M1S54_RS11560 PF06628 Catalase-related immune-responsive M1S54_RS11560 PF00199 Catalase M1S54_RS11560 PF18011 C-terminal domain found in long catalases M1S54_RS11570 PF02464 Competence-damaged protein M1S54_RS11570 PF18146 Damage-inducible protein CinA KH domain M1S54_RS11570 PF00994 Probable molybdopterin binding domain M1S54_RS11605 PF03466 LysR substrate binding domain M1S54_RS11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11625 PF00501 AMP-binding enzyme M1S54_RS11625 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS11630 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS11635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS11635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS11635 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS11640 PF01039 Carboxyl transferase domain M1S54_RS11645 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS11650 PF02785 Biotin carboxylase C-terminal domain M1S54_RS11650 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S54_RS11650 PF00289 Biotin carboxylase, N-terminal domain M1S54_RS11650 PF00364 Biotin-requiring enzyme M1S54_RS11650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S54_RS11655 PF00682 HMGL-like M1S54_RS11660 PF03466 LysR substrate binding domain M1S54_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS11675 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS11675 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S54_RS11675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS11685 PF07690 Major Facilitator Superfamily M1S54_RS11695 PF01144 Coenzyme A transferase M1S54_RS11700 PF01144 Coenzyme A transferase M1S54_RS11705 PF07690 Major Facilitator Superfamily M1S54_RS11710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS11710 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS11710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS11715 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS11725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S54_RS11725 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S54_RS11725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S54_RS11730 PF00108 Thiolase, N-terminal domain M1S54_RS11730 PF02803 Thiolase, C-terminal domain M1S54_RS11735 PF09339 IclR helix-turn-helix domain M1S54_RS11740 PF07690 Major Facilitator Superfamily M1S54_RS11745 PF03060 Nitronate monooxygenase M1S54_RS11750 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS11755 PF09339 IclR helix-turn-helix domain M1S54_RS11760 PF02515 CoA-transferase family III M1S54_RS11765 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS11765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS11765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS11770 PF07690 Major Facilitator Superfamily M1S54_RS11775 PF13419 Haloacid dehalogenase-like hydrolase M1S54_RS11780 PF00266 Aminotransferase class-V M1S54_RS11785 PF01266 FAD dependent oxidoreductase M1S54_RS11790 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS11795 PF00005 ABC transporter M1S54_RS11795 PF08402 TOBE domain M1S54_RS11805 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS11805 PF07702 UTRA domain M1S54_RS11810 PF01494 FAD binding domain M1S54_RS11815 PF09339 IclR helix-turn-helix domain M1S54_RS11815 PF01614 Bacterial transcriptional regulator M1S54_RS11820 PF02525 Flavodoxin-like fold M1S54_RS11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS11825 PF03466 LysR substrate binding domain M1S54_RS11830 PF02627 Carboxymuconolactone decarboxylase family M1S54_RS11835 PF00171 Aldehyde dehydrogenase family M1S54_RS11845 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S54_RS11855 PF00171 Aldehyde dehydrogenase family M1S54_RS11860 PF00296 Luciferase-like monooxygenase M1S54_RS11865 PF01613 Flavin reductase like domain M1S54_RS11870 PF12697 Alpha/beta hydrolase family M1S54_RS11890 PF01292 Prokaryotic cytochrome b561 M1S54_RS11895 PF00199 Catalase M1S54_RS11930 PF03061 Thioesterase superfamily M1S54_RS11935 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS11940 PF08223 PaaX-like protein C-terminal domain M1S54_RS11940 PF07848 PaaX-like protein M1S54_RS11945 PF00501 AMP-binding enzyme M1S54_RS11945 PF14535 AMP-binding enzyme C-terminal domain M1S54_RS11950 PF02803 Thiolase, C-terminal domain M1S54_RS11950 PF00108 Thiolase, N-terminal domain M1S54_RS11955 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S54_RS11955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S54_RS11955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S54_RS11960 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS11965 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS11970 PF00970 Oxidoreductase FAD-binding domain M1S54_RS11970 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS11970 PF00175 Oxidoreductase NAD-binding domain M1S54_RS11975 PF01883 Iron-sulfur cluster assembly protein M1S54_RS11980 PF05138 Phenylacetic acid catabolic protein M1S54_RS11985 PF06243 Phenylacetic acid degradation B M1S54_RS11990 PF05138 Phenylacetic acid catabolic protein M1S54_RS11995 PF00171 Aldehyde dehydrogenase family M1S54_RS11995 PF01575 MaoC like domain M1S54_RS12000 PF03313 Serine dehydratase alpha chain M1S54_RS12000 PF03315 Serine dehydratase beta chain M1S54_RS12005 PF13520 Amino acid permease M1S54_RS12010 PF00171 Aldehyde dehydrogenase family M1S54_RS12015 PF00083 Sugar (and other) transporter M1S54_RS12025 PF04324 BFD-like [2Fe-2S] binding domain M1S54_RS12025 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS12035 PF01266 FAD dependent oxidoreductase M1S54_RS12040 PF05544 Proline racemase M1S54_RS12045 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS12055 PF00701 Dihydrodipicolinate synthetase family M1S54_RS12065 PF00376 MerR family regulatory protein M1S54_RS12065 PF09278 MerR, DNA binding M1S54_RS12080 PF02677 Epoxyqueuosine reductase QueH M1S54_RS12095 PF07690 Major Facilitator Superfamily M1S54_RS12100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S54_RS12110 PF03466 LysR substrate binding domain M1S54_RS12110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS12130 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S54_RS12135 PF06812 ImpA, N-terminal, type VI secretion system M1S54_RS12180 PF05947 Type VI secretion system, TssF M1S54_RS12195 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S54_RS12220 PF00005 ABC transporter M1S54_RS12225 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S54_RS12230 PF01425 Amidase M1S54_RS12235 PF08753 NikR C terminal nickel binding domain M1S54_RS12235 PF01402 Ribbon-helix-helix protein, copG family M1S54_RS12255 PF02525 Flavodoxin-like fold M1S54_RS12260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S54_RS12260 PF00289 Biotin carboxylase, N-terminal domain M1S54_RS12260 PF02785 Biotin carboxylase C-terminal domain M1S54_RS12275 PF13823 Alcohol dehydrogenase GroES-associated M1S54_RS12275 PF00107 Zinc-binding dehydrogenase M1S54_RS12275 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS12285 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS12305 PF00654 Voltage gated chloride channel M1S54_RS12310 PF00289 Biotin carboxylase, N-terminal domain M1S54_RS12310 PF00364 Biotin-requiring enzyme M1S54_RS12310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S54_RS12310 PF02785 Biotin carboxylase C-terminal domain M1S54_RS12320 PF07286 Protein of unknown function (DUF1445) M1S54_RS12325 PF03746 LamB/YcsF family M1S54_RS12330 PF01566 Natural resistance-associated macrophage protein M1S54_RS12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS12335 PF03466 LysR substrate binding domain M1S54_RS12350 PF05593 RHS Repeat M1S54_RS12350 PF03527 RHS protein M1S54_RS12355 PF13296 Putative type VI secretion system Rhs element Vgr M1S54_RS12355 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S54_RS12355 PF04717 Type VI secretion system, phage-baseplate injector M1S54_RS12365 PF13419 Haloacid dehalogenase-like hydrolase M1S54_RS12385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S54_RS12385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S54_RS12405 PF07690 Major Facilitator Superfamily M1S54_RS12420 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S54_RS12425 PF00563 EAL domain M1S54_RS12425 PF03707 Bacterial signalling protein N terminal repeat M1S54_RS12425 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS12435 PF00892 EamA-like transporter family M1S54_RS12440 PF01037 Lrp/AsnC ligand binding domain M1S54_RS12445 PF05192 MutS domain III M1S54_RS12445 PF05188 MutS domain II M1S54_RS12445 PF01624 MutS domain I M1S54_RS12445 PF05190 MutS family domain IV M1S54_RS12445 PF00488 MutS domain V M1S54_RS12455 PF00037 4Fe-4S binding domain M1S54_RS12455 PF11953 Domain of unknown function (DUF3470) M1S54_RS12465 PF01596 O-methyltransferase M1S54_RS12475 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS12480 PF01205 Uncharacterized protein family UPF0029 M1S54_RS12490 PF00664 ABC transporter transmembrane region M1S54_RS12490 PF00005 ABC transporter M1S54_RS12490 PF03412 Peptidase C39 family M1S54_RS12495 PF02321 Outer membrane efflux protein M1S54_RS12500 PF00005 ABC transporter M1S54_RS12500 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S54_RS12505 PF03968 OstA-like protein M1S54_RS12520 PF00571 CBS domain M1S54_RS12520 PF01380 SIS domain M1S54_RS12525 PF09190 DALR domain M1S54_RS12525 PF01406 tRNA synthetases class I (C) catalytic domain M1S54_RS12560 PF01638 HxlR-like helix-turn-helix M1S54_RS12565 PF07690 Major Facilitator Superfamily M1S54_RS12590 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S54_RS12590 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S54_RS12600 PF00313 'Cold-shock' DNA-binding domain M1S54_RS12605 PF01810 LysE type translocator M1S54_RS12640 PF02601 Exonuclease VII, large subunit M1S54_RS12640 PF13742 OB-fold nucleic acid binding domain M1S54_RS12675 PF09278 MerR, DNA binding M1S54_RS12675 PF00376 MerR family regulatory protein M1S54_RS12680 PF00403 Heavy-metal-associated domain M1S54_RS12685 PF00403 Heavy-metal-associated domain M1S54_RS12690 PF03466 LysR substrate binding domain M1S54_RS12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS12700 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S54_RS12700 PF00355 Rieske [2Fe-2S] domain M1S54_RS12705 PF00866 Ring hydroxylating beta subunit M1S54_RS12710 PF00970 Oxidoreductase FAD-binding domain M1S54_RS12710 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS12710 PF00175 Oxidoreductase NAD-binding domain M1S54_RS12715 PF00106 short chain dehydrogenase M1S54_RS12720 PF03594 Benzoate membrane transport protein M1S54_RS12725 PF07690 Major Facilitator Superfamily M1S54_RS12735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S54_RS12735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S54_RS12740 PF00270 DEAD/DEAH box helicase M1S54_RS12740 PF11898 Domain of unknown function (DUF3418) M1S54_RS12740 PF04408 Helicase associated domain (HA2) M1S54_RS12740 PF00271 Helicase conserved C-terminal domain M1S54_RS12740 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S54_RS12745 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S54_RS12745 PF00578 AhpC/TSA family M1S54_RS12765 PF13192 Thioredoxin domain M1S54_RS12765 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS12775 PF00043 Glutathione S-transferase, C-terminal domain M1S54_RS12775 PF02798 Glutathione S-transferase, N-terminal domain M1S54_RS12785 PF02390 Putative methyltransferase M1S54_RS12790 PF13417 Glutathione S-transferase, N-terminal domain M1S54_RS12790 PF00043 Glutathione S-transferase, C-terminal domain M1S54_RS12800 PF00691 OmpA family M1S54_RS12800 PF13488 Glycine zipper M1S54_RS12805 PF01979 Amidohydrolase family M1S54_RS12810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S54_RS12810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S54_RS12820 PF10672 S-adenosylmethionine-dependent methyltransferase M1S54_RS12820 PF02926 THUMP domain M1S54_RS12820 PF01170 Putative RNA methylase family UPF0020 M1S54_RS12835 PF00004 ATPase family associated with various cellular activities (AAA) M1S54_RS12835 PF07724 AAA domain (Cdc48 subfamily) M1S54_RS12835 PF17871 AAA lid domain M1S54_RS12835 PF02861 Clp amino terminal domain, pathogenicity island component M1S54_RS12835 PF10431 C-terminal, D2-small domain, of ClpB protein M1S54_RS12850 PF02566 OsmC-like protein M1S54_RS12860 PF13545 Crp-like helix-turn-helix domain M1S54_RS12860 PF00027 Cyclic nucleotide-binding domain M1S54_RS12870 PF00248 Aldo/keto reductase family M1S54_RS12885 PF00709 Adenylosuccinate synthetase M1S54_RS12890 PF13393 Histidyl-tRNA synthetase M1S54_RS12895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S54_RS12895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S54_RS12900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S54_RS12900 PF01411 tRNA synthetases class II (A) M1S54_RS12900 PF02272 DHHA1 domain M1S54_RS12905 PF01842 ACT domain M1S54_RS12905 PF13840 ACT domain M1S54_RS12905 PF00696 Amino acid kinase family M1S54_RS12910 PF02599 Global regulator protein family M1S54_RS12915 PF01351 Ribonuclease HII M1S54_RS12925 PF01292 Prokaryotic cytochrome b561 M1S54_RS12930 PF00962 Adenosine/AMP deaminase M1S54_RS12935 PF00860 Permease family M1S54_RS12945 PF00743 Flavin-binding monooxygenase-like M1S54_RS12950 PF00106 short chain dehydrogenase M1S54_RS12960 PF17954 Quercetinase C-terminal cupin domain M1S54_RS12960 PF02678 Pirin M1S54_RS12965 PF17932 Tetracyclin repressor-like, C-terminal domain M1S54_RS12965 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS12975 PF00106 short chain dehydrogenase M1S54_RS12985 PF13610 DDE domain M1S54_RS12995 PF00239 Resolvase, N terminal domain M1S54_RS12995 PF02796 Helix-turn-helix domain of resolvase M1S54_RS13000 PF00563 EAL domain M1S54_RS13000 PF11809 Domain of unknown function (DUF3330) M1S54_RS13010 PF13495 Phage integrase, N-terminal SAM-like domain M1S54_RS13010 PF00589 Phage integrase family M1S54_RS13015 PF13610 DDE domain M1S54_RS13020 PF01636 Phosphotransferase enzyme family M1S54_RS13035 PF13610 DDE domain M1S54_RS13040 PF00239 Resolvase, N terminal domain M1S54_RS13040 PF02796 Helix-turn-helix domain of resolvase M1S54_RS13050 PF13610 DDE domain M1S54_RS13060 PF02796 Helix-turn-helix domain of resolvase M1S54_RS13060 PF00239 Resolvase, N terminal domain M1S54_RS13065 PF13610 DDE domain M1S54_RS13075 PF04958 Arginine N-succinyltransferase beta subunit M1S54_RS13080 PF00202 Aminotransferase class-III M1S54_RS13100 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS13100 PF07729 FCD domain M1S54_RS13110 PF00324 Amino acid permease M1S54_RS13115 PF01266 FAD dependent oxidoreductase M1S54_RS13120 PF00324 Amino acid permease M1S54_RS13160 PF05593 RHS Repeat M1S54_RS13160 PF03527 RHS protein M1S54_RS13165 PF13296 Putative type VI secretion system Rhs element Vgr M1S54_RS13165 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S54_RS13165 PF04717 Type VI secretion system, phage-baseplate injector M1S54_RS13185 PF03180 NLPA lipoprotein M1S54_RS13190 PF05987 Bacterial protein of unknown function (DUF898) M1S54_RS13205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S54_RS13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS13210 PF00764 Arginosuccinate synthase M1S54_RS13215 PF00360 Phytochrome region M1S54_RS13215 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS13215 PF01590 GAF domain M1S54_RS13215 PF00563 EAL domain M1S54_RS13220 PF01979 Amidohydrolase family M1S54_RS13225 PF00929 Exonuclease M1S54_RS13235 PF00593 TonB dependent receptor M1S54_RS13235 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS13240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S54_RS13240 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS13245 PF00005 ABC transporter M1S54_RS13245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S54_RS13250 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS13250 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S54_RS13255 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS13260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S54_RS13265 PF01464 Transglycosylase SLT domain M1S54_RS13265 PF01476 LysM domain M1S54_RS13265 PF01464 Transglycosylase SLT domain M1S54_RS13265 PF01476 LysM domain M1S54_RS13270 PF00929 Exonuclease M1S54_RS13280 PF00293 NUDIX domain M1S54_RS13280 PF09297 NADH pyrophosphatase zinc ribbon domain M1S54_RS13290 PF04972 BON domain M1S54_RS13295 PF02021 Uncharacterised protein family UPF0102 M1S54_RS13300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S54_RS13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS13310 PF03466 LysR substrate binding domain M1S54_RS13315 PF01810 LysE type translocator M1S54_RS13325 PF13411 MerR HTH family regulatory protein M1S54_RS13335 PF01494 FAD binding domain M1S54_RS13340 PF01494 FAD binding domain M1S54_RS13345 PF00557 Metallopeptidase family M24 M1S54_RS13345 PF05195 Aminopeptidase P, N-terminal domain M1S54_RS13430 PF01464 Transglycosylase SLT domain M1S54_RS13430 PF10145 Phage-related minor tail protein M1S54_RS13430 PF01551 Peptidase family M23 M1S54_RS13490 PF04860 Phage portal protein M1S54_RS13590 PF00772 DnaB-like helicase N terminal domain M1S54_RS13590 PF03796 DnaB-like helicase C terminal domain M1S54_RS13610 PF00717 Peptidase S24-like M1S54_RS13610 PF01726 LexA DNA binding domain M1S54_RS13665 PF00884 Sulfatase M1S54_RS13665 PF08019 Phosphoethanolamine transferase EptA/EptB M1S54_RS13710 PF01551 Peptidase family M23 M1S54_RS13710 PF08525 Opacity-associated protein A N-terminal motif M1S54_RS13710 PF01476 LysM domain M1S54_RS14035 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S54_RS14040 PF00691 OmpA family M1S54_RS14040 PF04355 SmpA / OmlA family M1S54_RS14045 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S54_RS14045 PF13018 Extended Signal Peptide of Type V secretion system M1S54_RS14045 PF03895 YadA-like membrane anchor domain M1S54_RS14045 PF05658 Head domain of trimeric autotransporter adhesin M1S54_RS14050 PF00004 ATPase family associated with various cellular activities (AAA) M1S54_RS14050 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S54_RS14050 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S54_RS14055 PF02590 Predicted SPOUT methyltransferase M1S54_RS14060 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S54_RS14070 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S54_RS14070 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S54_RS14075 PF04060 Putative Fe-S cluster M1S54_RS14080 PF10576 Iron-sulfur binding domain of endonuclease III M1S54_RS14080 PF00633 Helix-hairpin-helix motif M1S54_RS14080 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S54_RS14090 PF05191 Adenylate kinase, active site lid M1S54_RS14105 PF03717 Penicillin-binding Protein dimerisation domain M1S54_RS14105 PF00905 Penicillin binding protein transpeptidase domain M1S54_RS14120 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S54_RS14125 PF01730 UreF M1S54_RS14130 PF05194 UreE urease accessory protein, C-terminal domain M1S54_RS14130 PF02814 UreE urease accessory protein, N-terminal domain M1S54_RS14135 PF00449 Urease alpha-subunit, N-terminal domain M1S54_RS14135 PF01979 Amidohydrolase family M1S54_RS14140 PF00699 Urease beta subunit M1S54_RS14145 PF00547 Urease, gamma subunit M1S54_RS14150 PF01774 UreD urease accessory protein M1S54_RS14165 PF00463 Isocitrate lyase family M1S54_RS14170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS14170 PF03466 LysR substrate binding domain M1S54_RS14175 PF01595 Cyclin M transmembrane N-terminal domain M1S54_RS14175 PF03471 Transporter associated domain M1S54_RS14175 PF00571 CBS domain M1S54_RS14180 PF03600 Citrate transporter M1S54_RS14195 PF00009 Elongation factor Tu GTP binding domain M1S54_RS14200 PF01507 Phosphoadenosine phosphosulfate reductase family M1S54_RS14210 PF14052 Capsule assembly protein Wzi M1S54_RS14215 PF00152 tRNA synthetases class II (D, K and N) M1S54_RS14215 PF01336 OB-fold nucleic acid binding domain M1S54_RS14230 PF00301 Rubredoxin M1S54_RS14235 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS14235 PF18113 Rubredoxin binding C-terminal domain M1S54_RS14240 PF00561 alpha/beta hydrolase fold M1S54_RS14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS14245 PF03466 LysR substrate binding domain M1S54_RS14255 PF13090 Polyphosphate kinase C-terminal domain 2 M1S54_RS14255 PF17941 Polyphosphate kinase C-terminal domain 1 M1S54_RS14255 PF13089 Polyphosphate kinase N-terminal domain M1S54_RS14255 PF02503 Polyphosphate kinase middle domain M1S54_RS14260 PF00912 Transglycosylase M1S54_RS14265 PF01694 Rhomboid family M1S54_RS14275 PF00005 ABC transporter M1S54_RS14280 PF13472 GDSL-like Lipase/Acylhydrolase family M1S54_RS14285 PF00484 Carbonic anhydrase M1S54_RS14290 PF00561 alpha/beta hydrolase fold M1S54_RS14300 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS14300 PF00593 TonB dependent receptor M1S54_RS14305 PF01521 Iron-sulphur cluster biosynthesis M1S54_RS14305 PF01106 NifU-like domain M1S54_RS14315 PF00884 Sulfatase M1S54_RS14320 PF03781 Sulfatase-modifying factor enzyme 1 M1S54_RS14335 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS14340 PF01384 Phosphate transporter family M1S54_RS14345 PF00809 Pterin binding enzyme M1S54_RS14345 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S54_RS14345 PF02607 B12 binding domain M1S54_RS14345 PF02310 B12 binding domain M1S54_RS14345 PF02574 Homocysteine S-methyltransferase M1S54_RS14350 PF02779 Transketolase, pyrimidine binding domain M1S54_RS14350 PF02780 Transketolase, C-terminal domain M1S54_RS14355 PF00456 Transketolase, thiamine diphosphate binding domain M1S54_RS14360 PF07690 Major Facilitator Superfamily M1S54_RS14370 PF03466 LysR substrate binding domain M1S54_RS14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS14380 PF01263 Aldose 1-epimerase M1S54_RS14385 PF07690 Major Facilitator Superfamily M1S54_RS14390 PF12833 Helix-turn-helix domain M1S54_RS14390 PF02311 AraC-like ligand binding domain M1S54_RS14395 PF04960 Glutaminase M1S54_RS14400 PF01327 Polypeptide deformylase M1S54_RS14405 PF07690 Major Facilitator Superfamily M1S54_RS14415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S54_RS14415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S54_RS14415 PF00205 Thiamine pyrophosphate enzyme, central domain M1S54_RS14420 PF00171 Aldehyde dehydrogenase family M1S54_RS14425 PF01958 Domain of unknown function DUF108 M1S54_RS14425 PF03447 Homoserine dehydrogenase, NAD binding domain M1S54_RS14435 PF12697 Alpha/beta hydrolase family M1S54_RS14445 PF07690 Major Facilitator Superfamily M1S54_RS14450 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS14450 PF14759 Reductase C-terminal M1S54_RS14455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S54_RS14465 PF00355 Rieske [2Fe-2S] domain M1S54_RS14475 PF00355 Rieske [2Fe-2S] domain M1S54_RS14480 PF09339 IclR helix-turn-helix domain M1S54_RS14480 PF01614 Bacterial transcriptional regulator M1S54_RS14495 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS14505 PF00535 Glycosyl transferase family 2 M1S54_RS14510 PF14883 Hypothetical glycosyl hydrolase family 13 M1S54_RS14510 PF01522 Polysaccharide deacetylase M1S54_RS14515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S54_RS14520 PF07152 YaeQ protein M1S54_RS14525 PF00375 Sodium:dicarboxylate symporter family M1S54_RS14530 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S54_RS14530 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S54_RS14540 PF03061 Thioesterase superfamily M1S54_RS14550 PF02028 BCCT, betaine/carnitine/choline family transporter M1S54_RS14555 PF02028 BCCT, betaine/carnitine/choline family transporter M1S54_RS14560 PF13977 BetI-type transcriptional repressor, C-terminal M1S54_RS14560 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS14565 PF00171 Aldehyde dehydrogenase family M1S54_RS14570 PF00732 GMC oxidoreductase M1S54_RS14570 PF05199 GMC oxidoreductase M1S54_RS14575 PF06039 Malate:quinone oxidoreductase (Mqo) M1S54_RS14585 PF02574 Homocysteine S-methyltransferase M1S54_RS14590 PF13520 Amino acid permease M1S54_RS14615 PF01126 Heme oxygenase M1S54_RS14625 PF04575 Protein of unknown function (DUF560) M1S54_RS14635 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS14635 PF00593 TonB dependent receptor M1S54_RS14645 PF04542 Sigma-70 region 2 M1S54_RS14645 PF08281 Sigma-70, region 4 M1S54_RS14655 PF00701 Dihydrodipicolinate synthetase family M1S54_RS14660 PF00083 Sugar (and other) transporter M1S54_RS14680 PF01026 TatD related DNase M1S54_RS14695 PF07693 KAP family P-loop domain M1S54_RS14715 PF00436 Single-strand binding protein family M1S54_RS14770 PF00589 Phage integrase family M1S54_RS14770 PF13356 Arm DNA-binding domain M1S54_RS14810 PF10544 T5orf172 domain M1S54_RS14815 PF13614 AAA domain M1S54_RS14835 PF00905 Penicillin binding protein transpeptidase domain M1S54_RS14935 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S54_RS14935 PF02767 DNA polymerase III beta subunit, central domain M1S54_RS14935 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S54_RS14975 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S54_RS15175 PF01695 IstB-like ATP binding protein M1S54_RS15185 PF00145 C-5 cytosine-specific DNA methylase M1S54_RS15265 PF00929 Exonuclease M1S54_RS15340 PF07690 Major Facilitator Superfamily M1S54_RS15345 PF13533 Biotin-lipoyl like M1S54_RS15350 PF03061 Thioesterase superfamily M1S54_RS15355 PF00490 Delta-aminolevulinic acid dehydratase M1S54_RS15360 PF01266 FAD dependent oxidoreductase M1S54_RS15365 PF08338 Domain of unknown function (DUF1731) M1S54_RS15365 PF01370 NAD dependent epimerase/dehydratase family M1S54_RS15385 PF12320 Type 5 capsule protein repressor C-terminal domain M1S54_RS15385 PF00149 Calcineurin-like phosphoesterase M1S54_RS15395 PF01168 Alanine racemase, N-terminal domain M1S54_RS15400 PF00437 Type II/IV secretion system protein M1S54_RS15405 PF00437 Type II/IV secretion system protein M1S54_RS15410 PF01475 Ferric uptake regulator family M1S54_RS15415 PF04355 SmpA / OmlA family M1S54_RS15420 PF03658 RnfH family Ubiquitin M1S54_RS15430 PF01814 Hemerythrin HHE cation binding domain M1S54_RS15435 PF13230 Glutamine amidotransferases class-II M1S54_RS15445 PF00696 Amino acid kinase family M1S54_RS15450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S54_RS15450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S54_RS15450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S54_RS15450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S54_RS15455 PF00692 dUTPase M1S54_RS15460 PF00580 UvrD/REP helicase N-terminal domain M1S54_RS15460 PF13361 UvrD-like helicase C-terminal domain M1S54_RS15465 PF00691 OmpA family M1S54_RS15465 PF13488 Glycine zipper M1S54_RS15470 PF01553 Acyltransferase M1S54_RS15480 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S54_RS15485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S54_RS15490 PF03776 Septum formation topological specificity factor MinE M1S54_RS15510 PF01810 LysE type translocator M1S54_RS15515 PF09397 Ftsk gamma domain M1S54_RS15515 PF17854 FtsK alpha domain M1S54_RS15515 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S54_RS15515 PF01580 FtsK/SpoIIIE family M1S54_RS15520 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S54_RS15525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S54_RS15530 PF04377 Arginine-tRNA-protein transferase, C terminus M1S54_RS15530 PF04376 Arginine-tRNA-protein transferase, N terminus M1S54_RS15535 PF00583 Acetyltransferase (GNAT) family M1S54_RS15555 PF00679 Elongation factor G C-terminus M1S54_RS15555 PF14492 Elongation Factor G, domain II M1S54_RS15555 PF00009 Elongation factor Tu GTP binding domain M1S54_RS15555 PF03144 Elongation factor Tu domain 2 M1S54_RS15555 PF03764 Elongation factor G, domain IV M1S54_RS15560 PF00177 Ribosomal protein S7p/S5e M1S54_RS15565 PF00164 Ribosomal protein S12/S23 M1S54_RS15575 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S54_RS15575 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S54_RS15580 PF03653 Uncharacterised protein family (UPF0093) M1S54_RS15585 PF05726 Pirin C-terminal cupin domain M1S54_RS15585 PF02678 Pirin M1S54_RS15595 PF00795 Carbon-nitrogen hydrolase M1S54_RS15595 PF02540 NAD synthase M1S54_RS15610 PF00970 Oxidoreductase FAD-binding domain M1S54_RS15610 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S54_RS15610 PF00175 Oxidoreductase NAD-binding domain M1S54_RS15615 PF00171 Aldehyde dehydrogenase family M1S54_RS15620 PF00355 Rieske [2Fe-2S] domain M1S54_RS15620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S54_RS15625 PF07859 alpha/beta hydrolase fold M1S54_RS15630 PF02028 BCCT, betaine/carnitine/choline family transporter M1S54_RS15635 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S54_RS15640 PF03466 LysR substrate binding domain M1S54_RS15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS15660 PF00037 4Fe-4S binding domain M1S54_RS15665 PF01467 Cytidylyltransferase-like M1S54_RS15670 PF01668 SmpB protein M1S54_RS15675 PF03358 NADPH-dependent FMN reductase M1S54_RS15680 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S54_RS15685 PF01479 S4 domain M1S54_RS15685 PF00849 RNA pseudouridylate synthase M1S54_RS15690 PF13525 Outer membrane lipoprotein M1S54_RS15695 PF01807 CHC2 zinc finger M1S54_RS15695 PF08275 DNA primase catalytic core, N-terminal domain M1S54_RS15695 PF08278 DNA primase DnaG DnaB-binding M1S54_RS15695 PF10410 DnaB-helicase binding domain of primase M1S54_RS15700 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S54_RS15700 PF01488 Shikimate / quinate 5-dehydrogenase M1S54_RS15700 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S54_RS15710 PF03550 Outer membrane lipoprotein LolB M1S54_RS15715 PF08544 GHMP kinases C terminal M1S54_RS15715 PF00288 GHMP kinases N terminal domain M1S54_RS15740 PF14572 Phosphoribosyl synthetase-associated domain M1S54_RS15740 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S54_RS15745 PF01386 Ribosomal L25p family M1S54_RS15750 PF01195 Peptidyl-tRNA hydrolase M1S54_RS15755 PF02261 Aspartate decarboxylase M1S54_RS15770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S54_RS15780 PF02581 Thiamine monophosphate synthase M1S54_RS15780 PF03070 TENA/THI-4/PQQC family M1S54_RS15780 PF08543 Phosphomethylpyrimidine kinase M1S54_RS15785 PF04972 BON domain M1S54_RS15785 PF01476 LysM domain M1S54_RS15790 PF00550 Phosphopantetheine attachment site M1S54_RS15800 PF00698 Acyl transferase domain M1S54_RS15805 PF01783 Ribosomal L32p protein family M1S54_RS15810 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S54_RS15815 PF04315 Elongation factor P hydroxylase M1S54_RS15820 PF01300 Telomere recombination M1S54_RS15825 PF02616 Segregation and condensation protein ScpA M1S54_RS15830 PF04079 Segregation and condensation complex subunit ScpB M1S54_RS15835 PF00849 RNA pseudouridylate synthase M1S54_RS15835 PF01479 S4 domain M1S54_RS15850 PF00155 Aminotransferase class I and II M1S54_RS15855 PF04055 Radical SAM superfamily M1S54_RS15855 PF00202 Aminotransferase class-III M1S54_RS15855 PF06968 Biotin and Thiamin Synthesis associated domain M1S54_RS15860 PF12697 Alpha/beta hydrolase family M1S54_RS15860 PF08241 Methyltransferase domain M1S54_RS15865 PF02358 Trehalose-phosphatase M1S54_RS15870 PF00982 Glycosyltransferase family 20 M1S54_RS15875 PF07690 Major Facilitator Superfamily M1S54_RS15880 PF00210 Ferritin-like domain M1S54_RS15885 PF03120 NAD-dependent DNA ligase OB-fold domain M1S54_RS15885 PF00533 BRCA1 C Terminus (BRCT) domain M1S54_RS15885 PF12826 Helix-hairpin-helix motif M1S54_RS15885 PF01653 NAD-dependent DNA ligase adenylation domain M1S54_RS15885 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S54_RS15895 PF06470 SMC proteins Flexible Hinge Domain M1S54_RS15895 PF02463 RecF/RecN/SMC N terminal domain M1S54_RS15905 PF01925 Sulfite exporter TauE/SafE M1S54_RS15915 PF03309 Type III pantothenate kinase M1S54_RS15920 PF00448 SRP54-type protein, GTPase domain M1S54_RS15920 PF02978 Signal peptide binding domain M1S54_RS15920 PF02881 SRP54-type protein, helical bundle domain M1S54_RS15930 PF01207 Dihydrouridine synthase (Dus) M1S54_RS15960 PF00692 dUTPase M1S54_RS15975 PF01048 Phosphorylase superfamily M1S54_RS15980 PF10609 NUBPL iron-transfer P-loop NTPase M1S54_RS15990 PF01588 Putative tRNA binding domain M1S54_RS15990 PF09334 tRNA synthetases class I (M) M1S54_RS16015 PF13533 Biotin-lipoyl like M1S54_RS16020 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS16035 PF05552 Conserved TM helix M1S54_RS16050 PF00175 Oxidoreductase NAD-binding domain M1S54_RS16050 PF00970 Oxidoreductase FAD-binding domain M1S54_RS16055 PF03466 LysR substrate binding domain M1S54_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS16060 PF00313 'Cold-shock' DNA-binding domain M1S54_RS16070 PF00361 Proton-conducting membrane transporter M1S54_RS16075 PF00361 Proton-conducting membrane transporter M1S54_RS16080 PF00361 Proton-conducting membrane transporter M1S54_RS16080 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S54_RS16085 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S54_RS16090 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S54_RS16095 PF12838 4Fe-4S dicluster domain M1S54_RS16100 PF00146 NADH dehydrogenase M1S54_RS16105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S54_RS16105 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S54_RS16105 PF00384 Molybdopterin oxidoreductase M1S54_RS16110 PF10531 SLBB domain M1S54_RS16110 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S54_RS16110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S54_RS16120 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S54_RS16120 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S54_RS16125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S54_RS16130 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S54_RS16135 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS16135 PF17151 Periplasmic sensor domain M1S54_RS16145 PF00672 HAMP domain M1S54_RS16145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS16145 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS16150 PF00072 Response regulator receiver domain M1S54_RS16150 PF00486 Transcriptional regulatory protein, C terminal M1S54_RS16160 PF03477 ATP cone domain M1S54_RS16160 PF02867 Ribonucleotide reductase, barrel domain M1S54_RS16160 PF00317 Ribonucleotide reductase, all-alpha domain M1S54_RS16170 PF00268 Ribonucleotide reductase, small chain M1S54_RS16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS16180 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS16180 PF13755 Sensor N-terminal transmembrane domain M1S54_RS16180 PF13756 Stimulus-sensing domain M1S54_RS16180 PF00672 HAMP domain M1S54_RS16250 PF01011 PQQ enzyme repeat M1S54_RS16250 PF13360 PQQ-like domain M1S54_RS16275 PF02567 Phenazine biosynthesis-like protein M1S54_RS16300 PF01613 Flavin reductase like domain M1S54_RS16305 PF08267 Cobalamin-independent synthase, N-terminal domain M1S54_RS16305 PF01717 Cobalamin-independent synthase, Catalytic domain M1S54_RS16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS16315 PF03466 LysR substrate binding domain M1S54_RS16320 PF01810 LysE type translocator M1S54_RS16330 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S54_RS16330 PF12833 Helix-turn-helix domain M1S54_RS16335 PF01546 Peptidase family M20/M25/M40 M1S54_RS16335 PF07687 Peptidase dimerisation domain M1S54_RS16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS16345 PF03466 LysR substrate binding domain M1S54_RS16350 PF07690 Major Facilitator Superfamily M1S54_RS16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS16360 PF03466 LysR substrate binding domain M1S54_RS16365 PF14537 Cytochrome c3 M1S54_RS16365 PF00890 FAD binding domain M1S54_RS16375 PF02515 CoA-transferase family III M1S54_RS16380 PF07690 Major Facilitator Superfamily M1S54_RS16385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS16385 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS16385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS16390 PF03466 LysR substrate binding domain M1S54_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS16395 PF00107 Zinc-binding dehydrogenase M1S54_RS16395 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS16400 PF00962 Adenosine/AMP deaminase M1S54_RS16425 PF02445 Quinolinate synthetase A protein M1S54_RS16430 PF01960 ArgJ family M1S54_RS16435 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S54_RS16435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S54_RS16440 PF00893 Small Multidrug Resistance protein M1S54_RS16450 PF05275 Copper resistance protein B precursor (CopB) M1S54_RS16455 PF07731 Multicopper oxidase M1S54_RS16455 PF00394 Multicopper oxidase M1S54_RS16455 PF07732 Multicopper oxidase M1S54_RS16470 PF00834 Ribulose-phosphate 3 epimerase family M1S54_RS16480 PF00756 Putative esterase M1S54_RS16490 PF04445 Putative SAM-dependent methyltransferase M1S54_RS16495 PF00814 Glycoprotease family M1S54_RS16500 PF00132 Bacterial transferase hexapeptide (six repeats) M1S54_RS16505 PF00293 NUDIX domain M1S54_RS16545 PF04715 Anthranilate synthase component I, N terminal region M1S54_RS16545 PF00425 chorismate binding enzyme M1S54_RS16550 PF00155 Aminotransferase class I and II M1S54_RS16555 PF00815 Histidinol dehydrogenase M1S54_RS16560 PF01634 ATP phosphoribosyltransferase M1S54_RS16565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S54_RS16570 PF01722 BolA-like protein M1S54_RS16575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S54_RS16580 PF04963 Sigma-54 factor, core binding domain M1S54_RS16580 PF04552 Sigma-54, DNA binding domain M1S54_RS16580 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S54_RS16625 PF00795 Carbon-nitrogen hydrolase M1S54_RS16635 PF01047 MarR family M1S54_RS16640 PF02566 OsmC-like protein M1S54_RS16645 PF00437 Type II/IV secretion system protein M1S54_RS16665 PF01612 3'-5' exonuclease M1S54_RS16665 PF00476 DNA polymerase family A M1S54_RS16665 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S54_RS16665 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S54_RS16670 PF02325 YGGT family M1S54_RS16675 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S54_RS16675 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S54_RS16680 PF11734 TilS substrate C-terminal domain M1S54_RS16680 PF01171 PP-loop family M1S54_RS16680 PF09179 TilS substrate binding domain M1S54_RS16685 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S54_RS16690 PF02541 Ppx/GppA phosphatase family M1S54_RS16695 PF00085 Thioredoxin M1S54_RS16700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S54_RS16700 PF07498 Rho termination factor, N-terminal domain M1S54_RS16700 PF07497 Rho termination factor, RNA-binding domain M1S54_RS16715 PF00216 Bacterial DNA-binding protein M1S54_RS16720 PF03483 B3/4 domain M1S54_RS16720 PF03484 tRNA synthetase B5 domain M1S54_RS16720 PF03147 Ferredoxin-fold anticodon binding domain M1S54_RS16720 PF01588 Putative tRNA binding domain M1S54_RS16720 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S54_RS16725 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S54_RS16725 PF01409 tRNA synthetases class II core domain (F) M1S54_RS16745 PF00453 Ribosomal protein L20 M1S54_RS16750 PF01632 Ribosomal protein L35 M1S54_RS16760 PF07690 Major Facilitator Superfamily M1S54_RS16765 PF09335 SNARE associated Golgi protein M1S54_RS16770 PF00043 Glutathione S-transferase, C-terminal domain M1S54_RS16770 PF02798 Glutathione S-transferase, N-terminal domain M1S54_RS16775 PF00707 Translation initiation factor IF-3, C-terminal domain M1S54_RS16775 PF05198 Translation initiation factor IF-3, N-terminal domain M1S54_RS16780 PF03129 Anticodon binding domain M1S54_RS16780 PF02824 TGS domain M1S54_RS16780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S54_RS16780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S54_RS16785 PF00501 AMP-binding enzyme M1S54_RS16785 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS16790 PF04751 Protein of unknown function (DUF615) M1S54_RS16795 PF00381 PTS HPr component phosphorylation site M1S54_RS16800 PF03668 P-loop ATPase protein family M1S54_RS16805 PF02569 Pantoate-beta-alanine ligase M1S54_RS16810 PF02548 Ketopantoate hydroxymethyltransferase M1S54_RS16815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S54_RS16820 PF01743 Poly A polymerase head domain M1S54_RS16820 PF12626 Polymerase A arginine-rich C-terminus M1S54_RS16820 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S54_RS16830 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S54_RS16840 PF13291 ACT domain M1S54_RS16840 PF04607 Region found in RelA / SpoT proteins M1S54_RS16840 PF02824 TGS domain M1S54_RS16845 PF05958 tRNA (Uracil-5-)-methyltransferase M1S54_RS16855 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS16860 PF00672 HAMP domain M1S54_RS16860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS16860 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS16860 PF01627 Hpt domain M1S54_RS16860 PF00072 Response regulator receiver domain M1S54_RS16860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S54_RS16865 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS16870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S54_RS16870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S54_RS16875 PF01261 Xylose isomerase-like TIM barrel M1S54_RS16885 PF00106 short chain dehydrogenase M1S54_RS16890 PF02233 NAD(P) transhydrogenase beta subunit M1S54_RS16895 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S54_RS16900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S54_RS16900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S54_RS16905 PF00892 EamA-like transporter family M1S54_RS16915 PF07690 Major Facilitator Superfamily M1S54_RS16920 PF01207 Dihydrouridine synthase (Dus) M1S54_RS16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS16930 PF03466 LysR substrate binding domain M1S54_RS16940 PF00899 ThiF family M1S54_RS16950 PF00330 Aconitase family (aconitate hydratase) M1S54_RS16950 PF00694 Aconitase C-terminal domain M1S54_RS16955 PF01026 TatD related DNase M1S54_RS16970 PF00009 Elongation factor Tu GTP binding domain M1S54_RS16970 PF03144 Elongation factor Tu domain 2 M1S54_RS16970 PF16658 Class II release factor RF3, C-terminal domain M1S54_RS16990 PF00563 EAL domain M1S54_RS16990 PF00990 Diguanylate cyclase, GGDEF domain M1S54_RS16990 PF03707 Bacterial signalling protein N terminal repeat M1S54_RS16995 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S54_RS16995 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S54_RS17000 PF10369 Small subunit of acetolactate synthase M1S54_RS17005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S54_RS17005 PF00205 Thiamine pyrophosphate enzyme, central domain M1S54_RS17005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S54_RS17015 PF08264 Anticodon-binding domain of tRNA M1S54_RS17015 PF00133 tRNA synthetases class I (I, L, M and V) M1S54_RS17015 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S54_RS17015 PF09334 tRNA synthetases class I (M) M1S54_RS17030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S54_RS17035 PF00005 ABC transporter M1S54_RS17035 PF12704 MacB-like periplasmic core domain M1S54_RS17035 PF02687 FtsX-like permease family M1S54_RS17040 PF02321 Outer membrane efflux protein M1S54_RS17055 PF00929 Exonuclease M1S54_RS17060 PF03193 RsgA GTPase M1S54_RS17070 PF00462 Glutaredoxin M1S54_RS17075 PF02556 Preprotein translocase subunit SecB M1S54_RS17090 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S54_RS17090 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S54_RS17105 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S54_RS17105 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S54_RS17115 PF04820 Tryptophan halogenase M1S54_RS17135 PF00221 Aromatic amino acid lyase M1S54_RS17150 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS17150 PF00501 AMP-binding enzyme M1S54_RS17160 PF00550 Phosphopantetheine attachment site M1S54_RS17165 PF00550 Phosphopantetheine attachment site M1S54_RS17180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S54_RS17180 PF01926 50S ribosome-binding GTPase M1S54_RS17185 PF13360 PQQ-like domain M1S54_RS17195 PF03129 Anticodon binding domain M1S54_RS17195 PF13393 Histidyl-tRNA synthetase M1S54_RS17200 PF04551 GcpE protein M1S54_RS17205 PF13464 Domain of unknown function (DUF4115) M1S54_RS17215 PF04055 Radical SAM superfamily M1S54_RS17220 PF00334 Nucleoside diphosphate kinase M1S54_RS17225 PF04384 Iron-sulphur cluster assembly M1S54_RS17230 PF01569 PAP2 superfamily M1S54_RS17235 PF13439 Glycosyltransferase Family 4 M1S54_RS17235 PF00534 Glycosyl transferases group 1 M1S54_RS17240 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S54_RS17240 PF03572 Peptidase family S41 M1S54_RS17240 PF17804 Tail specific protease N-terminal domain M1S54_RS17240 PF00595 PDZ domain M1S54_RS17245 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S54_RS17255 PF00561 alpha/beta hydrolase fold M1S54_RS17260 PF00171 Aldehyde dehydrogenase family M1S54_RS17265 PF00171 Aldehyde dehydrogenase family M1S54_RS17270 PF01202 Shikimate kinase M1S54_RS17275 PF02447 GntP family permease M1S54_RS17280 PF01081 KDPG and KHG aldolase M1S54_RS17285 PF00920 Dehydratase family M1S54_RS17290 PF00871 Acetokinase family M1S54_RS17295 PF07085 DRTGG domain M1S54_RS17295 PF01515 Phosphate acetyl/butaryl transferase M1S54_RS17300 PF05681 Fumarate hydratase (Fumerase) M1S54_RS17300 PF05683 Fumarase C-terminus M1S54_RS17315 PF06689 ClpX C4-type zinc finger M1S54_RS17315 PF07724 AAA domain (Cdc48 subfamily) M1S54_RS17315 PF10431 C-terminal, D2-small domain, of ClpB protein M1S54_RS17320 PF00574 Clp protease M1S54_RS17325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S54_RS17325 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S54_RS17325 PF05697 Bacterial trigger factor protein (TF) M1S54_RS17330 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS17330 PF00593 TonB dependent receptor M1S54_RS17335 PF13640 2OG-Fe(II) oxygenase superfamily M1S54_RS17335 PF18331 PKHD-type hydroxylase C-terminal domain M1S54_RS17340 PF00682 HMGL-like M1S54_RS17340 PF08502 LeuA allosteric (dimerisation) domain M1S54_RS17345 PF00561 alpha/beta hydrolase fold M1S54_RS17350 PF00561 alpha/beta hydrolase fold M1S54_RS17350 PF07021 Methionine biosynthesis protein MetW M1S54_RS17360 PF01725 Ham1 family M1S54_RS17370 PF02416 mttA/Hcf106 family M1S54_RS17375 PF02416 mttA/Hcf106 family M1S54_RS17380 PF00902 Sec-independent protein translocase protein (TatC) M1S54_RS17400 PF01790 Prolipoprotein diacylglyceryl transferase M1S54_RS17415 PF00303 Thymidylate synthase M1S54_RS17420 PF00186 Dihydrofolate reductase M1S54_RS17430 PF01625 Peptide methionine sulfoxide reductase M1S54_RS17440 PF01618 MotA/TolQ/ExbB proton channel family M1S54_RS17450 PF01842 ACT domain M1S54_RS17450 PF00551 Formyl transferase M1S54_RS17460 PF00171 Aldehyde dehydrogenase family M1S54_RS17465 PF00830 Ribosomal L28 family M1S54_RS17470 PF00471 Ribosomal protein L33 M1S54_RS17475 PF00999 Sodium/hydrogen exchanger family M1S54_RS17475 PF02254 TrkA-N domain M1S54_RS17495 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S54_RS17500 PF13361 UvrD-like helicase C-terminal domain M1S54_RS17500 PF00580 UvrD/REP helicase N-terminal domain M1S54_RS17515 PF08272 Topoisomerase I zinc-ribbon-like M1S54_RS17515 PF01131 DNA topoisomerase M1S54_RS17515 PF01751 Toprim domain M1S54_RS17515 PF01396 Topoisomerase DNA binding C4 zinc finger M1S54_RS17525 PF01638 HxlR-like helix-turn-helix M1S54_RS17530 PF08240 Alcohol dehydrogenase GroES-like domain M1S54_RS17530 PF00107 Zinc-binding dehydrogenase M1S54_RS17535 PF04102 SlyX M1S54_RS17540 PF12848 ABC transporter M1S54_RS17540 PF00005 ABC transporter M1S54_RS17540 PF16326 ABC transporter C-terminal domain M1S54_RS17545 PF01810 LysE type translocator M1S54_RS17550 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S54_RS17560 PF00375 Sodium:dicarboxylate symporter family M1S54_RS17570 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S54_RS17570 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S54_RS17590 PF01416 tRNA pseudouridine synthase M1S54_RS17600 PF01176 Translation initiation factor 1A / IF-1 M1S54_RS17615 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S54_RS17625 PF00694 Aconitase C-terminal domain M1S54_RS17630 PF00330 Aconitase family (aconitate hydratase) M1S54_RS17640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS17640 PF03466 LysR substrate binding domain M1S54_RS17660 PF00293 NUDIX domain M1S54_RS17665 PF01590 GAF domain M1S54_RS17665 PF05524 PEP-utilising enzyme, N-terminal M1S54_RS17665 PF00391 PEP-utilising enzyme, mobile domain M1S54_RS17665 PF02896 PEP-utilising enzyme, TIM barrel domain M1S54_RS17670 PF00141 Peroxidase M1S54_RS17675 PF12706 Beta-lactamase superfamily domain M1S54_RS17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS17680 PF03466 LysR substrate binding domain M1S54_RS17690 PF02798 Glutathione S-transferase, N-terminal domain M1S54_RS17695 PF08279 HTH domain M1S54_RS17695 PF13280 WYL domain M1S54_RS17700 PF13419 Haloacid dehalogenase-like hydrolase M1S54_RS17705 PF00849 RNA pseudouridylate synthase M1S54_RS17705 PF01479 S4 domain M1S54_RS17710 PF12111 Polyribonucleotide phosphorylase C terminal M1S54_RS17710 PF10150 Ribonuclease E/G family M1S54_RS17710 PF00575 S1 RNA binding domain M1S54_RS17715 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS17715 PF00501 AMP-binding enzyme M1S54_RS17730 PF03466 LysR substrate binding domain M1S54_RS17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS17735 PF00106 short chain dehydrogenase M1S54_RS17740 PF06969 HemN C-terminal domain M1S54_RS17740 PF04055 Radical SAM superfamily M1S54_RS17750 PF01554 MatE M1S54_RS17755 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS17755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS17755 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS17760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS17760 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS17765 PF03109 ABC1 family M1S54_RS17770 PF01197 Ribosomal protein L31 M1S54_RS17785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S54_RS17805 PF03884 DNA gyrase inhibitor YacG M1S54_RS17810 PF00753 Metallo-beta-lactamase superfamily M1S54_RS17815 PF00762 Ferrochelatase M1S54_RS17825 PF01177 Asp/Glu/Hydantoin racemase M1S54_RS17840 PF01206 Sulfurtransferase TusA M1S54_RS17845 PF00571 CBS domain M1S54_RS17845 PF03471 Transporter associated domain M1S54_RS17850 PF00795 Carbon-nitrogen hydrolase M1S54_RS17855 PF01588 Putative tRNA binding domain M1S54_RS17865 PF07963 Prokaryotic N-terminal methylation motif M1S54_RS17865 PF08334 Type II secretion system (T2SS), protein G M1S54_RS17870 PF00482 Type II secretion system (T2SS), protein F M1S54_RS17875 PF00270 DEAD/DEAH box helicase M1S54_RS17875 PF00271 Helicase conserved C-terminal domain M1S54_RS17875 PF17764 3′ DNA-binding domain (3′BD) M1S54_RS17875 PF18074 Primosomal protein N C-terminal domain M1S54_RS17875 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S54_RS17880 PF02254 TrkA-N domain M1S54_RS17880 PF00999 Sodium/hydrogen exchanger family M1S54_RS17885 PF01430 Hsp33 protein M1S54_RS17895 PF01556 DnaJ C terminal domain M1S54_RS17895 PF00226 DnaJ domain M1S54_RS17905 PF01544 CorA-like Mg2+ transporter protein M1S54_RS17910 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S54_RS17910 PF01138 3' exoribonuclease family, domain 1 M1S54_RS17910 PF03725 3' exoribonuclease family, domain 2 M1S54_RS17910 PF00575 S1 RNA binding domain M1S54_RS17910 PF00013 KH domain M1S54_RS17915 PF00312 Ribosomal protein S15 M1S54_RS17920 PF00144 Beta-lactamase M1S54_RS17925 PF13538 UvrD-like helicase C-terminal domain M1S54_RS17930 PF00580 UvrD/REP helicase N-terminal domain M1S54_RS17930 PF13361 UvrD-like helicase C-terminal domain M1S54_RS17930 PF12705 PD-(D/E)XK nuclease superfamily M1S54_RS17935 PF17946 RecC C-terminal domain M1S54_RS17945 PF03976 Polyphosphate kinase 2 (PPK2) M1S54_RS17955 PF01209 ubiE/COQ5 methyltransferase family M1S54_RS17965 PF03109 ABC1 family M1S54_RS17970 PF01494 FAD binding domain M1S54_RS17975 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S54_RS17990 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S54_RS17990 PF00361 Proton-conducting membrane transporter M1S54_RS17990 PF13244 Domain of unknown function (DUF4040) M1S54_RS17990 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S54_RS17995 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S54_RS18000 PF00361 Proton-conducting membrane transporter M1S54_RS18005 PF01899 Na+/H+ ion antiporter subunit M1S54_RS18010 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S54_RS18015 PF03334 Na+/H+ antiporter subunit M1S54_RS18020 PF02033 Ribosome-binding factor A M1S54_RS18025 PF04760 Translation initiation factor IF-2, N-terminal region M1S54_RS18025 PF08364 Bacterial translation initiation factor IF-2 associated region M1S54_RS18025 PF11987 Translation-initiation factor 2 M1S54_RS18025 PF00009 Elongation factor Tu GTP binding domain M1S54_RS18030 PF08529 NusA N-terminal domain M1S54_RS18030 PF13184 NusA-like KH domain M1S54_RS18030 PF00575 S1 RNA binding domain M1S54_RS18035 PF02576 RimP N-terminal domain M1S54_RS18035 PF17384 RimP C-terminal SH3 domain M1S54_RS18055 PF03840 Preprotein translocase SecG subunit M1S54_RS18060 PF00121 Triosephosphate isomerase M1S54_RS18065 PF00437 Type II/IV secretion system protein M1S54_RS18065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S54_RS18070 PF00482 Type II secretion system (T2SS), protein F M1S54_RS18080 PF06750 Bacterial Peptidase A24 N-terminal domain M1S54_RS18080 PF01478 Type IV leader peptidase family M1S54_RS18085 PF01121 Dephospho-CoA kinase M1S54_RS18095 PF00588 SpoU rRNA Methylase family M1S54_RS18095 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S54_RS18100 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S54_RS18110 PF02463 RecF/RecN/SMC N terminal domain M1S54_RS18115 PF02622 Uncharacterized ACR, COG1678 M1S54_RS18120 PF03652 Holliday junction resolvase M1S54_RS18125 PF13533 Biotin-lipoyl like M1S54_RS18150 PF02805 Metal binding domain of Ada M1S54_RS18150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S54_RS18150 PF12833 Helix-turn-helix domain M1S54_RS18150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S54_RS18155 PF01066 CDP-alcohol phosphatidyltransferase M1S54_RS18165 PF01541 GIY-YIG catalytic domain M1S54_RS18165 PF02151 UvrB/uvrC motif M1S54_RS18165 PF08459 UvrC Helix-hairpin-helix N-terminal M1S54_RS18185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S54_RS18185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S54_RS18185 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS18190 PF02803 Thiolase, C-terminal domain M1S54_RS18190 PF00108 Thiolase, N-terminal domain M1S54_RS18210 PF00376 MerR family regulatory protein M1S54_RS18210 PF09278 MerR, DNA binding M1S54_RS18220 PF01323 DSBA-like thioredoxin domain M1S54_RS18235 PF00183 Hsp90 protein M1S54_RS18235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS18250 PF13726 Na+-H+ antiporter family M1S54_RS18250 PF03553 Na+/H+ antiporter family M1S54_RS18255 PF00561 alpha/beta hydrolase fold M1S54_RS18275 PF04983 RNA polymerase Rpb1, domain 3 M1S54_RS18275 PF04997 RNA polymerase Rpb1, domain 1 M1S54_RS18275 PF04998 RNA polymerase Rpb1, domain 5 M1S54_RS18275 PF00623 RNA polymerase Rpb1, domain 2 M1S54_RS18275 PF05000 RNA polymerase Rpb1, domain 4 M1S54_RS18280 PF04563 RNA polymerase beta subunit M1S54_RS18280 PF04561 RNA polymerase Rpb2, domain 2 M1S54_RS18280 PF04565 RNA polymerase Rpb2, domain 3 M1S54_RS18280 PF10385 RNA polymerase beta subunit external 1 domain M1S54_RS18280 PF00562 RNA polymerase Rpb2, domain 6 M1S54_RS18280 PF04560 RNA polymerase Rpb2, domain 7 M1S54_RS18285 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S54_RS18285 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S54_RS18290 PF00466 Ribosomal protein L10 M1S54_RS18295 PF00687 Ribosomal protein L1p/L10e family M1S54_RS18300 PF00298 Ribosomal protein L11, RNA binding domain M1S54_RS18300 PF03946 Ribosomal protein L11, N-terminal domain M1S54_RS18305 PF00467 KOW motif M1S54_RS18305 PF02357 Transcription termination factor nusG M1S54_RS18310 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S54_RS18320 PF00009 Elongation factor Tu GTP binding domain M1S54_RS18320 PF03144 Elongation factor Tu domain 2 M1S54_RS18320 PF03143 Elongation factor Tu C-terminal domain M1S54_RS18345 PF04715 Anthranilate synthase component I, N terminal region M1S54_RS18345 PF00425 chorismate binding enzyme M1S54_RS18350 PF13419 Haloacid dehalogenase-like hydrolase M1S54_RS18355 PF12401 Protein of unknown function (DUF2662) M1S54_RS18355 PF00498 FHA domain M1S54_RS18360 PF03958 Bacterial type II/III secretion system short domain M1S54_RS18360 PF00263 Bacterial type II and III secretion system protein M1S54_RS18375 PF00816 H-NS histone family M1S54_RS18400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S54_RS18400 PF03900 Porphobilinogen deaminase, C-terminal domain M1S54_RS18405 PF04397 LytTr DNA-binding domain M1S54_RS18405 PF00072 Response regulator receiver domain M1S54_RS18410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS18410 PF06580 Histidine kinase M1S54_RS18410 PF07694 5TMR of 5TMR-LYT M1S54_RS18415 PF00206 Lyase M1S54_RS18415 PF14698 Argininosuccinate lyase C-terminal M1S54_RS18420 PF04362 Bacterial Fe(2+) trafficking M1S54_RS18425 PF01895 PhoU domain M1S54_RS18430 PF02321 Outer membrane efflux protein M1S54_RS18435 PF00892 EamA-like transporter family M1S54_RS18450 PF01964 Radical SAM ThiC family M1S54_RS18450 PF13667 ThiC-associated domain M1S54_RS18455 PF00293 NUDIX domain M1S54_RS18460 PF00149 Calcineurin-like phosphoesterase M1S54_RS18465 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S54_RS18470 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S54_RS18475 PF01098 Cell cycle protein M1S54_RS18480 PF02875 Mur ligase family, glutamate ligase domain M1S54_RS18480 PF08245 Mur ligase middle domain M1S54_RS18490 PF07664 Ferrous iron transport protein B C terminus M1S54_RS18490 PF02421 Ferrous iron transport protein B M1S54_RS18490 PF07670 Nucleoside recognition M1S54_RS18500 PF02899 Phage integrase, N-terminal SAM-like domain M1S54_RS18500 PF00589 Phage integrase family M1S54_RS18505 PF10411 Disulfide bond isomerase protein N-terminus M1S54_RS18505 PF13098 Thioredoxin-like domain M1S54_RS18510 PF00742 Homoserine dehydrogenase M1S54_RS18510 PF03447 Homoserine dehydrogenase, NAD binding domain M1S54_RS18510 PF01842 ACT domain M1S54_RS18515 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS18520 PF00768 D-alanyl-D-alanine carboxypeptidase M1S54_RS18525 PF00196 Bacterial regulatory proteins, luxR family M1S54_RS18525 PF00072 Response regulator receiver domain M1S54_RS18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S54_RS18530 PF00512 His Kinase A (phospho-acceptor) domain M1S54_RS18540 PF00595 PDZ domain M1S54_RS18540 PF03572 Peptidase family S41 M1S54_RS18545 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S54_RS18545 PF01676 Metalloenzyme superfamily M1S54_RS18550 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S54_RS18560 PF00883 Cytosol aminopeptidase family, catalytic domain M1S54_RS18560 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S54_RS18580 PF00677 Lumazine binding domain M1S54_RS18590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S54_RS18590 PF01872 RibD C-terminal domain M1S54_RS18595 PF03477 ATP cone domain M1S54_RS18600 PF00909 Ammonium Transporter Family M1S54_RS18605 PF00543 Nitrogen regulatory protein P-II M1S54_RS18625 PF01636 Phosphotransferase enzyme family M1S54_RS18630 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S54_RS18650 PF02909 Tetracyclin repressor-like, C-terminal domain M1S54_RS18650 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS18655 PF07690 Major Facilitator Superfamily M1S54_RS18665 PF01740 STAS domain M1S54_RS18665 PF00916 Sulfate permease family M1S54_RS18670 PF00582 Universal stress protein family M1S54_RS18690 PF00665 Integrase core domain M1S54_RS18700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S54_RS18700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S54_RS18700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S54_RS18700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S54_RS18705 PF00809 Pterin binding enzyme M1S54_RS18720 PF00665 Integrase core domain M1S54_RS18745 PF02899 Phage integrase, N-terminal SAM-like domain M1S54_RS18745 PF00589 Phage integrase family M1S54_RS18775 PF00916 Sulfate permease family M1S54_RS18775 PF01740 STAS domain M1S54_RS18780 PF00582 Universal stress protein family M1S54_RS18800 PF00665 Integrase core domain M1S54_RS18815 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS18815 PF00155 Aminotransferase class I and II M1S54_RS18825 PF00701 Dihydrodipicolinate synthetase family M1S54_RS18840 PF03573 outer membrane porin, OprD family M1S54_RS18845 PF00719 Inorganic pyrophosphatase M1S54_RS18860 PF00501 AMP-binding enzyme M1S54_RS18860 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS18865 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S54_RS18865 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S54_RS18870 PF07690 Major Facilitator Superfamily M1S54_RS18875 PF03458 UPF0126 domain M1S54_RS18880 PF02810 SEC-C motif M1S54_RS18885 PF03471 Transporter associated domain M1S54_RS18885 PF03741 Integral membrane protein TerC family M1S54_RS18890 PF03641 Possible lysine decarboxylase M1S54_RS18895 PF07690 Major Facilitator Superfamily M1S54_RS18905 PF00817 impB/mucB/samB family M1S54_RS18905 PF11799 impB/mucB/samB family C-terminal domain M1S54_RS18905 PF11798 IMS family HHH motif M1S54_RS18925 PF04055 Radical SAM superfamily M1S54_RS18925 PF08497 Radical SAM N-terminal M1S54_RS18925 PF11842 Domain of unknown function (DUF3362) M1S54_RS18945 PF03358 NADPH-dependent FMN reductase M1S54_RS18955 PF00291 Pyridoxal-phosphate dependent enzyme M1S54_RS19015 PF01327 Polypeptide deformylase M1S54_RS19025 PF02481 DNA recombination-mediator protein A M1S54_RS19025 PF17782 DprA winged helix domain M1S54_RS19030 PF01300 Telomere recombination M1S54_RS19035 PF00892 EamA-like transporter family M1S54_RS19040 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS19045 PF07690 Major Facilitator Superfamily M1S54_RS19055 PF00255 Glutathione peroxidase M1S54_RS19065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S54_RS19070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S54_RS19070 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S54_RS19075 PF00231 ATP synthase M1S54_RS19080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S54_RS19080 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S54_RS19080 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S54_RS19085 PF00213 ATP synthase delta (OSCP) subunit M1S54_RS19090 PF00430 ATP synthase B/B' CF(0) M1S54_RS19095 PF00137 ATP synthase subunit C M1S54_RS19100 PF00119 ATP synthase A chain M1S54_RS19120 PF00005 ABC transporter M1S54_RS19125 PF00950 ABC 3 transport family M1S54_RS19130 PF01810 LysE type translocator M1S54_RS19135 PF04261 Dyp-type peroxidase family M1S54_RS19145 PF00390 Malic enzyme, N-terminal domain M1S54_RS19145 PF03949 Malic enzyme, NAD binding domain M1S54_RS19150 PF03485 Arginyl tRNA synthetase N terminal domain M1S54_RS19150 PF05746 DALR anticodon binding domain M1S54_RS19150 PF00750 tRNA synthetases class I (R) M1S54_RS19170 PF02678 Pirin M1S54_RS19170 PF05726 Pirin C-terminal cupin domain M1S54_RS19180 PF03551 Transcriptional regulator PadR-like family M1S54_RS19185 PF13427 Domain of unknown function (DUF4111) M1S54_RS19185 PF01909 Nucleotidyltransferase domain M1S54_RS19190 PF00117 Glutamine amidotransferase class-I M1S54_RS19190 PF00958 GMP synthase C terminal domain M1S54_RS19190 PF02540 NAD synthase M1S54_RS19195 PF04286 Protein of unknown function (DUF445) M1S54_RS19200 PF07681 DoxX M1S54_RS19205 PF09335 SNARE associated Golgi protein M1S54_RS19220 PF13614 AAA domain M1S54_RS19230 PF01722 BolA-like protein M1S54_RS19245 PF01648 4'-phosphopantetheinyl transferase superfamily M1S54_RS19250 PF12697 Alpha/beta hydrolase family M1S54_RS19270 PF00975 Thioesterase domain M1S54_RS19270 PF14765 Polyketide synthase dehydratase M1S54_RS19270 PF00550 Phosphopantetheine attachment site M1S54_RS19270 PF08242 Methyltransferase domain M1S54_RS19270 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S54_RS19270 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S54_RS19270 PF16197 Ketoacyl-synthetase C-terminal extension M1S54_RS19275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS19275 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS19275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS19280 PF00501 AMP-binding enzyme M1S54_RS19285 PF00196 Bacterial regulatory proteins, luxR family M1S54_RS19285 PF03472 Autoinducer binding domain M1S54_RS19295 PF00765 Autoinducer synthase M1S54_RS19300 PF07690 Major Facilitator Superfamily M1S54_RS19300 PF00083 Sugar (and other) transporter M1S54_RS19305 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS19310 PF00378 Enoyl-CoA hydratase/isomerase M1S54_RS19315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S54_RS19315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S54_RS19315 PF02770 Acyl-CoA dehydrogenase, middle domain M1S54_RS19320 PF13193 AMP-binding enzyme C-terminal domain M1S54_RS19320 PF00501 AMP-binding enzyme M1S54_RS19325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S54_RS19325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S54_RS19330 PF00171 Aldehyde dehydrogenase family M1S54_RS19340 PF00324 Amino acid permease M1S54_RS19345 PF00324 Amino acid permease M1S54_RS19350 PF01042 Endoribonuclease L-PSP M1S54_RS19355 PF00842 Alanine racemase, C-terminal domain M1S54_RS19355 PF01168 Alanine racemase, N-terminal domain M1S54_RS19360 PF01266 FAD dependent oxidoreductase M1S54_RS19365 PF01037 Lrp/AsnC ligand binding domain M1S54_RS19375 PF07715 TonB-dependent Receptor Plug Domain M1S54_RS19375 PF00593 TonB dependent receptor M1S54_RS19390 PF00849 RNA pseudouridylate synthase M1S54_RS19405 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S54_RS19405 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS19415 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S54_RS19415 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S54_RS19450 PF00694 Aconitase C-terminal domain M1S54_RS19450 PF00330 Aconitase family (aconitate hydratase) M1S54_RS19455 PF00285 Citrate synthase, C-terminal domain M1S54_RS19465 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS19465 PF07729 FCD domain M1S54_RS19475 PF00155 Aminotransferase class I and II M1S54_RS19480 PF01565 FAD binding domain M1S54_RS19480 PF09330 D-lactate dehydrogenase, membrane binding M1S54_RS19485 PF01070 FMN-dependent dehydrogenase M1S54_RS19490 PF07729 FCD domain M1S54_RS19490 PF00392 Bacterial regulatory proteins, gntR family M1S54_RS19495 PF02652 L-lactate permease M1S54_RS19500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S54_RS19500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S54_RS19500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S54_RS19500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S54_RS19505 PF16363 GDP-mannose 4,6 dehydratase M1S54_RS19510 PF00342 Phosphoglucose isomerase M1S54_RS19515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S54_RS19515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S54_RS19515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S54_RS19520 PF00483 Nucleotidyl transferase M1S54_RS19525 PF02397 Bacterial sugar transferase M1S54_RS19545 PF07922 Glycosyltransferase family 52 M1S54_RS19550 PF01943 Polysaccharide biosynthesis protein M1S54_RS19555 PF02348 Cytidylyltransferase M1S54_RS19560 PF00483 Nucleotidyl transferase M1S54_RS19570 PF08666 SAF domain M1S54_RS19570 PF03102 NeuB family M1S54_RS19575 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S54_RS19580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S54_RS19585 PF02719 Polysaccharide biosynthesis protein M1S54_RS19590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S54_RS19590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S54_RS19590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S54_RS19595 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S54_RS19595 PF02563 Polysaccharide biosynthesis/export protein M1S54_RS19595 PF10531 SLBB domain M1S54_RS19600 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S54_RS19605 PF02706 Chain length determinant protein M1S54_RS19605 PF13807 G-rich domain on putative tyrosine kinase M1S54_RS19605 PF13614 AAA domain M1S54_RS19610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S54_RS19610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S54_RS19615 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S54_RS19615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S54_RS19620 PF03023 Lipid II flippase MurJ M1S54_RS19625 PF01510 N-acetylmuramoyl-L-alanine amidase M1S54_RS19630 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S54_RS19630 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S54_RS19640 PF05506 Domain of unknown function (DUF756) M1S54_RS19640 PF04185 Phosphoesterase family M1S54_RS19650 PF01138 3' exoribonuclease family, domain 1 M1S54_RS19650 PF03725 3' exoribonuclease family, domain 2 M1S54_RS19655 PF00487 Fatty acid desaturase M1S54_RS19660 PF00175 Oxidoreductase NAD-binding domain M1S54_RS19665 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS19670 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS19670 PF08360 QacR-like protein, C-terminal region M1S54_RS19675 PF01323 DSBA-like thioredoxin domain M1S54_RS19685 PF13419 Haloacid dehalogenase-like hydrolase M1S54_RS19690 PF00106 short chain dehydrogenase M1S54_RS19705 PF00583 Acetyltransferase (GNAT) family M1S54_RS19705 PF00696 Amino acid kinase family M1S54_RS19710 PF09084 NMT1/THI5 like M1S54_RS19715 PF09084 NMT1/THI5 like M1S54_RS19720 PF00296 Luciferase-like monooxygenase M1S54_RS19725 PF00528 Binding-protein-dependent transport system inner membrane component M1S54_RS19730 PF00005 ABC transporter M1S54_RS19735 PF00440 Bacterial regulatory proteins, tetR family M1S54_RS19735 PF08362 YcdC-like protein, C-terminal region M1S54_RS19740 PF01048 Phosphorylase superfamily M1S54_RS19750 PF01687 Riboflavin kinase M1S54_RS19750 PF06574 FAD synthetase M1S54_RS19755 PF06827 Zinc finger found in FPG and IleRS M1S54_RS19755 PF08264 Anticodon-binding domain of tRNA M1S54_RS19755 PF00133 tRNA synthetases class I (I, L, M and V) M1S54_RS19760 PF01252 Signal peptidase (SPase) II M1S54_RS19765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S54_RS19805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S54_RS19810 PF07859 alpha/beta hydrolase fold M1S54_RS19830 PF03466 LysR substrate binding domain M1S54_RS19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S54_RS19835 PF01025 GrpE M1S54_RS19840 PF00012 Hsp70 protein M1S54_RS19860 PF13406 Transglycosylase SLT domain M1S54_RS19865 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S54_RS19865 PF02222 ATP-grasp domain M1S54_RS19870 PF00731 AIR carboxylase M1S54_RS19880 PF08245 Mur ligase middle domain M1S54_RS19880 PF01225 Mur ligase family, catalytic domain M1S54_RS19880 PF02875 Mur ligase family, glutamate ligase domain M1S54_RS19890 PF01569 PAP2 superfamily M1S54_RS19895 PF03741 Integral membrane protein TerC family M1S54_RS19905 PF03738 Glutathionylspermidine synthase preATP-grasp M1S54_RS19910 PF00355 Rieske [2Fe-2S] domain M1S54_RS19915 PF01979 Amidohydrolase family M1S54_RS19920 PF00156 Phosphoribosyl transferase domain M1S54_RS19930 PF10411 Disulfide bond isomerase protein N-terminus M1S54_RS19930 PF13098 Thioredoxin-like domain M1S54_RS19935 PF01545 Cation efflux family M1S54_RS19935 PF16916 Dimerisation domain of Zinc Transporter M1S54_RS19940 PF02583 Metal-sensitive transcriptional repressor M1S54_RS19945 PF01926 50S ribosome-binding GTPase M1S54_RS19945 PF12631 MnmE helical domain M1S54_RS19945 PF10396 GTP-binding protein TrmE N-terminus M1S54_RS19950 PF02096 60Kd inner membrane protein M1S54_RS19950 PF14849 YidC periplasmic domain M1S54_RS19955 PF01809 Putative membrane protein insertion efficiency factor M1S54_RS19960 PF00825 Ribonuclease P M1S54_RS19965 PF00468 Ribosomal protein L34 M1S54_RS19970 PF13614 AAA domain M1S54_RS19975 PF17762 HTH domain found in ParB protein M1S54_RS19975 PF02195 ParB-like nuclease domain M1S54_RS19990 PF05816 Toxic anion resistance protein (TelA) M1S54_RS20085 PF00226 DnaJ domain M1S54_RS20085 PF01556 DnaJ C terminal domain M1S54_RS20085 PF00684 DnaJ central domain M1S54_RS20120 PF07057 DNA helicase TraI M1S54_RS20120 PF18272 single-stranded DNA binding TraI N-terminal subdomain M1S54_RS20120 PF18340 DNA relaxase TraI 2B/2B-like domain M1S54_RS20120 PF08751 TrwC relaxase M1S54_RS20155 PF02796 Helix-turn-helix domain of resolvase M1S54_RS20155 PF00239 Resolvase, N terminal domain M1S54_RS20170 PF01464 Transglycosylase SLT domain M1S54_RS20205 PF10411 Disulfide bond isomerase protein N-terminus M1S54_RS20205 PF13098 Thioredoxin-like domain M1S54_RS20240 PF06834 TraU protein M1S54_RS20250 PF06986 Type-1V conjugative transfer system mating pair stabilisation M1S54_RS20265 PF06122 Conjugative relaxosome accessory transposon protein M1S54_RS20285 PF13438 Domain of unknown function (DUF4113) M1S54_RS20285 PF11799 impB/mucB/samB family C-terminal domain M1S54_RS20285 PF00817 impB/mucB/samB family M1S54_RS20375 PF00565 Staphylococcal nuclease homologue M1S54_RS20380 PF00816 H-NS histone family