locus-tag class description RU84_RS00005 PF00308 Bacterial dnaA protein RU84_RS00005 PF11638 DnaA N-terminal domain RU84_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RU84_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RU84_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RU84_RS00010 PF02767 DNA polymerase III beta subunit, central domain RU84_RS00015 PF02463 RecF/RecN/SMC N terminal domain RU84_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus RU84_RS00020 PF01751 Toprim domain RU84_RS00020 PF00204 DNA gyrase B RU84_RS00020 PF18053 DNA gyrase B subunit insert domain RU84_RS00030 PF09335 SNARE associated Golgi protein RU84_RS00035 PF00005 ABC transporter RU84_RS00035 PF12848 ABC transporter RU84_RS00055 PF01521 Iron-sulphur cluster biosynthesis RU84_RS00060 PF00561 alpha/beta hydrolase fold RU84_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase RU84_RS00070 PF00579 tRNA synthetases class I (W and Y) RU84_RS00105 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS00105 PF00043 Glutathione S-transferase, C-terminal domain RU84_RS00115 PF00209 Sodium:neurotransmitter symporter family RU84_RS00125 PF01189 16S rRNA methyltransferase RsmB/F RU84_RS00125 PF01029 NusB family RU84_RS00130 PF00551 Formyl transferase RU84_RS00130 PF02911 Formyl transferase, C-terminal domain RU84_RS00135 PF00920 Dehydratase family RU84_RS00150 PF03466 LysR substrate binding domain RU84_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS00155 PF00860 Permease family RU84_RS00160 PF00311 Phosphoenolpyruvate carboxylase RU84_RS00165 PF00440 Bacterial regulatory proteins, tetR family RU84_RS00165 PF08361 MAATS-type transcriptional repressor, C-terminal region RU84_RS00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS00175 PF00873 AcrB/AcrD/AcrF family RU84_RS00185 PF00226 DnaJ domain RU84_RS00185 PF01556 DnaJ C terminal domain RU84_RS00185 PF00684 DnaJ central domain RU84_RS00195 PF05173 Dihydrodipicolinate reductase, C-terminus RU84_RS00195 PF01113 Dihydrodipicolinate reductase, N-terminus RU84_RS00205 PF07690 Major Facilitator Superfamily RU84_RS00210 PF00248 Aldo/keto reductase family RU84_RS00215 PF03466 LysR substrate binding domain RU84_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS00225 PF00392 Bacterial regulatory proteins, gntR family RU84_RS00225 PF00155 Aminotransferase class I and II RU84_RS00230 PF08240 Alcohol dehydrogenase GroES-like domain RU84_RS00230 PF00107 Zinc-binding dehydrogenase RU84_RS00235 PF03352 Methyladenine glycosylase RU84_RS00250 PF00730 HhH-GPD superfamily base excision DNA repair protein RU84_RS00250 PF00633 Helix-hairpin-helix motif RU84_RS00250 PF10576 Iron-sulfur binding domain of endonuclease III RU84_RS00250 PF14815 NUDIX domain RU84_RS00265 PF07043 Protein of unknown function (DUF1328) RU84_RS00270 PF03692 Putative zinc- or iron-chelating domain RU84_RS00275 PF07995 Glucose / Sorbosone dehydrogenase RU84_RS00280 PF16193 AAA C-terminal domain RU84_RS00280 PF12002 MgsA AAA+ ATPase C terminal RU84_RS00280 PF00004 ATPase family associated with various cellular activities (AAA) RU84_RS00285 PF01226 Formate/nitrite transporter RU84_RS00295 PF01259 SAICAR synthetase RU84_RS00305 PF00701 Dihydrodipicolinate synthetase family RU84_RS00310 PF00857 Isochorismatase family RU84_RS00315 PF01758 Sodium Bile acid symporter family RU84_RS00320 PF01554 MatE RU84_RS00325 PF04463 Protein of unknown function (DUF523) RU84_RS00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU84_RS00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU84_RS00345 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS00345 PF14497 Glutathione S-transferase, C-terminal domain RU84_RS00355 PF00324 Amino acid permease RU84_RS00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain RU84_RS00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain RU84_RS00375 PF07702 UTRA domain RU84_RS00375 PF00392 Bacterial regulatory proteins, gntR family RU84_RS00380 PF05962 HutD RU84_RS00385 PF17391 Urocanase N-terminal domain RU84_RS00385 PF17392 Urocanase C-terminal domain RU84_RS00385 PF01175 Urocanase Rossmann-like domain RU84_RS00390 PF00221 Aromatic amino acid lyase RU84_RS00395 PF00324 Amino acid permease RU84_RS00400 PF01979 Amidohydrolase family RU84_RS00405 PF00491 Arginase family RU84_RS00420 PF01177 Asp/Glu/Hydantoin racemase RU84_RS00425 PF01380 SIS domain RU84_RS00430 PF12804 MobA-like NTP transferase domain RU84_RS00430 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS00430 PF14602 Hexapeptide repeat of succinyl-transferase RU84_RS00435 PF04608 Phosphatidylglycerophosphatase A RU84_RS00440 PF02769 AIR synthase related protein, C-terminal domain RU84_RS00440 PF00586 AIR synthase related protein, N-terminal domain RU84_RS00445 PF01029 NusB family RU84_RS00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase RU84_RS00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RU84_RS00455 PF00925 GTP cyclohydrolase II RU84_RS00480 PF02580 D-Tyr-tRNA(Tyr) deacylase RU84_RS00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RU84_RS00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RU84_RS00490 PF00581 Rhodanese-like domain RU84_RS00495 PF02666 Phosphatidylserine decarboxylase RU84_RS00500 PF03069 Acetamidase/Formamidase family RU84_RS00520 PF00989 PAS fold RU84_RS00520 PF11808 Phosphate regulon sensor protein PhoR RU84_RS00520 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS00525 PF00486 Transcriptional regulatory protein, C terminal RU84_RS00525 PF00072 Response regulator receiver domain RU84_RS00535 PF00106 short chain dehydrogenase RU84_RS00540 PF01554 MatE RU84_RS00545 PF00155 Aminotransferase class I and II RU84_RS00550 PF04286 Protein of unknown function (DUF445) RU84_RS00565 PF04262 Glutamate-cysteine ligase RU84_RS00570 PF02600 Disulfide bond formation protein DsbB RU84_RS00575 PF13296 Putative type VI secretion system Rhs element Vgr RU84_RS00575 PF04717 Type VI secretion system, phage-baseplate injector RU84_RS00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) RU84_RS00580 PF01471 Putative peptidoglycan binding domain RU84_RS00580 PF01476 LysM domain RU84_RS00580 PF01510 N-acetylmuramoyl-L-alanine amidase RU84_RS00610 PF05728 Uncharacterised protein family (UPF0227) RU84_RS00615 PF00204 DNA gyrase B RU84_RS00615 PF00986 DNA gyrase B subunit, carboxyl terminus RU84_RS00615 PF01751 Toprim domain RU84_RS00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS00620 PF04115 Ureidoglycolate lyase RU84_RS00625 PF03561 Allantoicase repeat RU84_RS00630 PF01494 FAD binding domain RU84_RS00640 PF00860 Permease family RU84_RS00645 PF00576 HIUase/Transthyretin family RU84_RS00675 PF11412 Disulphide bond corrector protein DsbC RU84_RS00675 PF02683 Cytochrome C biogenesis protein transmembrane region RU84_RS00680 PF07694 5TMR of 5TMR-LYT RU84_RS00680 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS00695 PF03960 ArsC family RU84_RS00700 PF03372 Endonuclease/Exonuclease/phosphatase family RU84_RS00705 PF00156 Phosphoribosyl transferase domain RU84_RS00710 PF00593 TonB dependent receptor RU84_RS00710 PF07715 TonB-dependent Receptor Plug Domain RU84_RS00720 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RU84_RS00720 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RU84_RS00725 PF03033 Glycosyltransferase family 28 N-terminal domain RU84_RS00725 PF04101 Glycosyltransferase family 28 C-terminal domain RU84_RS00730 PF01225 Mur ligase family, catalytic domain RU84_RS00730 PF02875 Mur ligase family, glutamate ligase domain RU84_RS00730 PF08245 Mur ligase middle domain RU84_RS00735 PF07478 D-ala D-ala ligase C-terminus RU84_RS00735 PF01820 D-ala D-ala ligase N-terminus RU84_RS00740 PF03799 Cell division protein FtsQ RU84_RS00740 PF08478 POTRA domain, FtsQ-type RU84_RS00745 PF02491 SHS2 domain inserted in FTSA RU84_RS00750 PF00091 Tubulin/FtsZ family, GTPase domain RU84_RS00750 PF12327 FtsZ family, C-terminal domain RU84_RS00755 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RU84_RS00765 PF01551 Peptidase family M23 RU84_RS00770 PF00456 Transketolase, thiamine diphosphate binding domain RU84_RS00770 PF17831 Pyruvate dehydrogenase E1 component middle domain RU84_RS00775 PF02817 e3 binding domain RU84_RS00775 PF00364 Biotin-requiring enzyme RU84_RS00775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RU84_RS00785 PF01169 Uncharacterized protein family UPF0016 RU84_RS00790 PF00593 TonB dependent receptor RU84_RS00790 PF07715 TonB-dependent Receptor Plug Domain RU84_RS00795 PF01613 Flavin reductase like domain RU84_RS00795 PF00258 Flavodoxin RU84_RS00800 PF03692 Putative zinc- or iron-chelating domain RU84_RS00805 PF00571 CBS domain RU84_RS00805 PF00478 IMP dehydrogenase / GMP reductase domain RU84_RS00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RU84_RS00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RU84_RS00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RU84_RS00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RU84_RS00815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RU84_RS00815 PF01243 Pyridoxamine 5'-phosphate oxidase RU84_RS00820 PF17768 RecJ OB domain RU84_RS00820 PF01368 DHH family RU84_RS00820 PF02272 DHHA1 domain RU84_RS00830 PF03462 PCRF domain RU84_RS00830 PF00472 RF-1 domain RU84_RS00840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU84_RS00845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RU84_RS00850 PF04452 RNA methyltransferase RU84_RS00855 PF00924 Mechanosensitive ion channel RU84_RS00865 PF16177 Acetyl-coenzyme A synthetase N-terminus RU84_RS00865 PF13193 AMP-binding enzyme C-terminal domain RU84_RS00865 PF00501 AMP-binding enzyme RU84_RS00870 PF00857 Isochorismatase family RU84_RS00875 PF01037 Lrp/AsnC ligand binding domain RU84_RS00880 PF00296 Luciferase-like monooxygenase RU84_RS00885 PF03358 NADPH-dependent FMN reductase RU84_RS00890 PF00072 Response regulator receiver domain RU84_RS00890 PF00196 Bacterial regulatory proteins, luxR family RU84_RS00900 PF00672 HAMP domain RU84_RS00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS00900 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS00900 PF01627 Hpt domain RU84_RS00900 PF00072 Response regulator receiver domain RU84_RS00905 PF04341 Protein of unknown function, DUF485 RU84_RS00910 PF00474 Sodium:solute symporter family RU84_RS00920 PF02028 BCCT, betaine/carnitine/choline family transporter RU84_RS00930 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS00935 PF17760 UvrA interaction domain RU84_RS00935 PF00005 ABC transporter RU84_RS00935 PF17755 UvrA DNA-binding domain RU84_RS00940 PF00440 Bacterial regulatory proteins, tetR family RU84_RS00940 PF16925 Tetracyclin repressor-like, C-terminal domain RU84_RS00945 PF00107 Zinc-binding dehydrogenase RU84_RS00945 PF08240 Alcohol dehydrogenase GroES-like domain RU84_RS00955 PF06942 GlpM protein RU84_RS00960 PF08543 Phosphomethylpyrimidine kinase RU84_RS00960 PF02581 Thiamine monophosphate synthase RU84_RS00960 PF03070 TENA/THI-4/PQQC family RU84_RS00970 PF07690 Major Facilitator Superfamily RU84_RS00975 PF00436 Single-strand binding protein family RU84_RS00985 PF03591 AzlC protein RU84_RS00995 PF00324 Amino acid permease RU84_RS01000 PF00392 Bacterial regulatory proteins, gntR family RU84_RS01000 PF00155 Aminotransferase class I and II RU84_RS01005 PF00202 Aminotransferase class-III RU84_RS01010 PF00171 Aldehyde dehydrogenase family RU84_RS01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS01020 PF00857 Isochorismatase family RU84_RS01030 PF01593 Flavin containing amine oxidoreductase RU84_RS01050 PF07690 Major Facilitator Superfamily RU84_RS01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS01055 PF03466 LysR substrate binding domain RU84_RS01075 PF00248 Aldo/keto reductase family RU84_RS01080 PF02311 AraC-like ligand binding domain RU84_RS01080 PF12833 Helix-turn-helix domain RU84_RS01090 PF07693 KAP family P-loop domain RU84_RS01095 PF13936 Helix-turn-helix domain RU84_RS01095 PF00665 Integrase core domain RU84_RS01110 PF01638 HxlR-like helix-turn-helix RU84_RS01115 PF02525 Flavodoxin-like fold RU84_RS01130 PF02705 K+ potassium transporter RU84_RS01155 PF00230 Major intrinsic protein RU84_RS01170 PF00977 Histidine biosynthesis protein RU84_RS01175 PF01636 Phosphotransferase enzyme family RU84_RS01200 PF00977 Histidine biosynthesis protein RU84_RS01215 PF00117 Glutamine amidotransferase class-I RU84_RS01220 PF00475 Imidazoleglycerol-phosphate dehydratase RU84_RS01240 PF00583 Acetyltransferase (GNAT) family RU84_RS01245 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RU84_RS01245 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RU84_RS01250 PF00672 HAMP domain RU84_RS01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS01250 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS01255 PF00072 Response regulator receiver domain RU84_RS01255 PF00486 Transcriptional regulatory protein, C terminal RU84_RS01260 PF09371 Tex-like protein N-terminal domain RU84_RS01260 PF16921 Tex protein YqgF-like domain RU84_RS01260 PF00575 S1 RNA binding domain RU84_RS01260 PF17674 HHH domain RU84_RS01265 PF01740 STAS domain RU84_RS01265 PF00916 Sulfate permease family RU84_RS01270 PF00106 short chain dehydrogenase RU84_RS01275 PF01053 Cys/Met metabolism PLP-dependent enzyme RU84_RS01280 PF00005 ABC transporter RU84_RS01280 PF12848 ABC transporter RU84_RS01320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS01320 PF00529 HlyD membrane-fusion protein of T1SS RU84_RS01325 PF00873 AcrB/AcrD/AcrF family RU84_RS01330 PF01545 Cation efflux family RU84_RS01360 PF00324 Amino acid permease RU84_RS01375 PF00749 tRNA synthetases class I (E and Q), catalytic domain RU84_RS01390 PF01795 MraW methylase family RU84_RS01400 PF00905 Penicillin binding protein transpeptidase domain RU84_RS01400 PF03717 Penicillin-binding Protein dimerisation domain RU84_RS01405 PF02875 Mur ligase family, glutamate ligase domain RU84_RS01405 PF01225 Mur ligase family, catalytic domain RU84_RS01405 PF08245 Mur ligase middle domain RU84_RS01410 PF01225 Mur ligase family, catalytic domain RU84_RS01410 PF02875 Mur ligase family, glutamate ligase domain RU84_RS01410 PF08245 Mur ligase middle domain RU84_RS01415 PF00953 Glycosyl transferase family 4 RU84_RS01425 PF13847 Methyltransferase domain RU84_RS01430 PF00905 Penicillin binding protein transpeptidase domain RU84_RS01430 PF00912 Transglycosylase RU84_RS01430 PF17092 Penicillin-binding protein OB-like domain RU84_RS01435 PF11104 Type IV pilus assembly protein PilM; RU84_RS01440 PF05137 Fimbrial assembly protein (PilN) RU84_RS01445 PF04350 Pilus assembly protein, PilO RU84_RS01455 PF07660 Secretin and TonB N terminus short domain RU84_RS01455 PF11741 AMIN domain RU84_RS01455 PF03958 Bacterial type II/III secretion system short domain RU84_RS01455 PF00263 Bacterial type II and III secretion system protein RU84_RS01460 PF01202 Shikimate kinase RU84_RS01465 PF01761 3-dehydroquinate synthase RU84_RS01475 PF00310 Glutamine amidotransferases class-II RU84_RS01475 PF04898 Glutamate synthase central domain RU84_RS01475 PF01645 Conserved region in glutamate synthase RU84_RS01475 PF01493 GXGXG motif RU84_RS01480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RU84_RS01480 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS01490 PF04011 LemA family RU84_RS01495 PF04536 TPM domain RU84_RS01505 PF07963 Prokaryotic N-terminal methylation motif RU84_RS01505 PF00114 Pilin (bacterial filament) RU84_RS01515 PF11846 Virulence factor membrane-bound polymerase, C-terminal RU84_RS01515 PF04932 O-Antigen ligase RU84_RS01515 PF15864 Protein glycosylation ligase RU84_RS01520 PF00210 Ferritin-like domain RU84_RS01525 PF04324 BFD-like [2Fe-2S] binding domain RU84_RS01530 PF01042 Endoribonuclease L-PSP RU84_RS01535 PF13291 ACT domain RU84_RS01535 PF02824 TGS domain RU84_RS01535 PF04607 Region found in RelA / SpoT proteins RU84_RS01540 PF01192 RNA polymerase Rpb6 RU84_RS01545 PF00625 Guanylate kinase RU84_RS01550 PF02401 LytB protein RU84_RS01580 PF08334 Type II secretion system (T2SS), protein G RU84_RS01580 PF07963 Prokaryotic N-terminal methylation motif RU84_RS01590 PF00886 Ribosomal protein S16 RU84_RS01595 PF01782 RimM N-terminal domain RU84_RS01595 PF05239 PRC-barrel domain RU84_RS01600 PF01746 tRNA (Guanine-1)-methyltransferase RU84_RS01605 PF01245 Ribosomal protein L19 RU84_RS01610 PF00561 alpha/beta hydrolase fold RU84_RS01615 PF03280 Proteobacterial lipase chaperone protein RU84_RS01620 PF16198 tRNA pseudouridylate synthase B C-terminal domain RU84_RS01620 PF09157 Pseudouridine synthase II TruB, C-terminal RU84_RS01620 PF01509 TruB family pseudouridylate synthase (N terminal domain) RU84_RS01625 PF01925 Sulfite exporter TauE/SafE RU84_RS01635 PF00892 EamA-like transporter family RU84_RS01640 PF00892 EamA-like transporter family RU84_RS01645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU84_RS01645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU84_RS01650 PF01565 FAD binding domain RU84_RS01650 PF02913 FAD linked oxidases, C-terminal domain RU84_RS01660 PF03992 Antibiotic biosynthesis monooxygenase RU84_RS01665 PF02525 Flavodoxin-like fold RU84_RS01675 PF07690 Major Facilitator Superfamily RU84_RS01680 PF12805 FUSC-like inner membrane protein yccS RU84_RS01685 PF00080 Copper/zinc superoxide dismutase (SODC) RU84_RS01690 PF01594 AI-2E family transporter RU84_RS01695 PF13614 AAA domain RU84_RS01715 PF08241 Methyltransferase domain RU84_RS01725 PF00324 Amino acid permease RU84_RS01730 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RU84_RS01730 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RU84_RS01735 PF00202 Aminotransferase class-III RU84_RS01740 PF04958 Arginine N-succinyltransferase beta subunit RU84_RS01745 PF00171 Aldehyde dehydrogenase family RU84_RS01750 PF04996 Succinylarginine dihydrolase RU84_RS01755 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RU84_RS01770 PF05922 Peptidase inhibitor I9 RU84_RS01770 PF00082 Subtilase family RU84_RS01785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS01785 PF03466 LysR substrate binding domain RU84_RS01790 PF00892 EamA-like transporter family RU84_RS01810 PF02092 Glycyl-tRNA synthetase beta subunit RU84_RS01810 PF05746 DALR anticodon binding domain RU84_RS01815 PF02091 Glycyl-tRNA synthetase alpha subunit RU84_RS01820 PF07690 Major Facilitator Superfamily RU84_RS01835 PF00571 CBS domain RU84_RS01840 PF04024 PspC domain RU84_RS01850 PF12806 Acetyl-CoA dehydrogenase C-terminal like RU84_RS01850 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS01860 PF08501 Shikimate dehydrogenase substrate binding domain RU84_RS01860 PF01488 Shikimate / quinate 5-dehydrogenase RU84_RS01860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RU84_RS01865 PF01218 Coproporphyrinogen III oxidase RU84_RS01870 PF00925 GTP cyclohydrolase II RU84_RS01875 PF02779 Transketolase, pyrimidine binding domain RU84_RS01875 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RU84_RS01875 PF02780 Transketolase, C-terminal domain RU84_RS01880 PF00459 Inositol monophosphatase family RU84_RS01885 PF03880 DbpA RNA binding domain RU84_RS01885 PF00270 DEAD/DEAH box helicase RU84_RS01885 PF12343 Cold shock protein DEAD box A RU84_RS01885 PF00271 Helicase conserved C-terminal domain RU84_RS01895 PF00005 ABC transporter RU84_RS01900 PF02405 Permease MlaE RU84_RS01910 PF05494 MlaC protein RU84_RS01920 PF01544 CorA-like Mg2+ transporter protein RU84_RS01925 PF03641 Possible lysine decarboxylase RU84_RS01930 PF00293 NUDIX domain RU84_RS01935 PF00156 Phosphoribosyl transferase domain RU84_RS01940 PF17191 RecG wedge domain RU84_RS01940 PF00271 Helicase conserved C-terminal domain RU84_RS01940 PF00270 DEAD/DEAH box helicase RU84_RS01955 PF01553 Acyltransferase RU84_RS01965 PF00375 Sodium:dicarboxylate symporter family RU84_RS01975 PF01926 50S ribosome-binding GTPase RU84_RS01980 PF02082 Transcriptional regulator RU84_RS01985 PF00175 Oxidoreductase NAD-binding domain RU84_RS01985 PF00970 Oxidoreductase FAD-binding domain RU84_RS01985 PF00042 Globin RU84_RS01990 PF05872 Bacterial protein of unknown function (DUF853) RU84_RS01995 PF01053 Cys/Met metabolism PLP-dependent enzyme RU84_RS02000 PF00117 Glutamine amidotransferase class-I RU84_RS02005 PF00338 Ribosomal protein S10p/S20e RU84_RS02010 PF00297 Ribosomal protein L3 RU84_RS02015 PF00573 Ribosomal protein L4/L1 family RU84_RS02020 PF00276 Ribosomal protein L23 RU84_RS02025 PF03947 Ribosomal Proteins L2, C-terminal domain RU84_RS02025 PF00181 Ribosomal Proteins L2, RNA binding domain RU84_RS02030 PF00203 Ribosomal protein S19 RU84_RS02035 PF00237 Ribosomal protein L22p/L17e RU84_RS02040 PF07650 KH domain RU84_RS02040 PF00189 Ribosomal protein S3, C-terminal domain RU84_RS02045 PF00252 Ribosomal protein L16p/L10e RU84_RS02050 PF00831 Ribosomal L29 protein RU84_RS02055 PF00366 Ribosomal protein S17 RU84_RS02060 PF00238 Ribosomal protein L14p/L23e RU84_RS02065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RU84_RS02065 PF00467 KOW motif RU84_RS02070 PF00281 Ribosomal protein L5 RU84_RS02070 PF00673 ribosomal L5P family C-terminus RU84_RS02075 PF00253 Ribosomal protein S14p/S29e RU84_RS02080 PF00410 Ribosomal protein S8 RU84_RS02085 PF00347 Ribosomal protein L6 RU84_RS02090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RU84_RS02095 PF03719 Ribosomal protein S5, C-terminal domain RU84_RS02095 PF00333 Ribosomal protein S5, N-terminal domain RU84_RS02100 PF00327 Ribosomal protein L30p/L7e RU84_RS02105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RU84_RS02110 PF00344 SecY translocase RU84_RS02115 PF00444 Ribosomal protein L36 RU84_RS02120 PF00416 Ribosomal protein S13/S18 RU84_RS02125 PF00411 Ribosomal protein S11 RU84_RS02130 PF00163 Ribosomal protein S4/S9 N-terminal domain RU84_RS02130 PF01479 S4 domain RU84_RS02135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RU84_RS02135 PF01000 RNA polymerase Rpb3/RpoA insert domain RU84_RS02135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RU84_RS02140 PF01196 Ribosomal protein L17 RU84_RS02145 PF00743 Flavin-binding monooxygenase-like RU84_RS02150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS02150 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS02150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS02155 PF03937 Flavinator of succinate dehydrogenase RU84_RS02185 PF09526 Probable metal-binding protein (DUF2387) RU84_RS02190 PF01432 Peptidase family M3 RU84_RS02195 PF17876 Cold shock domain RU84_RS02195 PF08206 Ribonuclease B OB domain RU84_RS02195 PF00773 RNB domain RU84_RS02195 PF00575 S1 RNA binding domain RU84_RS02195 PF08461 Ribonuclease R winged-helix domain RU84_RS02240 PF01557 Fumarylacetoacetate (FAA) hydrolase family RU84_RS02245 PF12833 Helix-turn-helix domain RU84_RS02250 PF00892 EamA-like transporter family RU84_RS02255 PF03631 Virulence factor BrkB RU84_RS02260 PF03358 NADPH-dependent FMN reductase RU84_RS02285 PF02130 Uncharacterized protein family UPF0054 RU84_RS02290 PF02562 PhoH-like protein RU84_RS02295 PF00919 Uncharacterized protein family UPF0004 RU84_RS02295 PF01938 TRAM domain RU84_RS02295 PF04055 Radical SAM superfamily RU84_RS02300 PF01551 Peptidase family M23 RU84_RS02300 PF10145 Phage-related minor tail protein RU84_RS02300 PF01464 Transglycosylase SLT domain RU84_RS02310 PF00056 lactate/malate dehydrogenase, NAD binding domain RU84_RS02310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RU84_RS02330 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RU84_RS02335 PF01066 CDP-alcohol phosphatidyltransferase RU84_RS02380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS02380 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS02380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS02385 PF17932 Tetracyclin repressor-like, C-terminal domain RU84_RS02385 PF00440 Bacterial regulatory proteins, tetR family RU84_RS02400 PF01039 Carboxyl transferase domain RU84_RS02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS02405 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS02415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU84_RS02415 PF02785 Biotin carboxylase C-terminal domain RU84_RS02415 PF00289 Biotin carboxylase, N-terminal domain RU84_RS02415 PF00364 Biotin-requiring enzyme RU84_RS02435 PF00665 Integrase core domain RU84_RS02435 PF13936 Helix-turn-helix domain RU84_RS02440 PF00753 Metallo-beta-lactamase superfamily RU84_RS02440 PF14863 Alkyl sulfatase dimerisation RU84_RS02440 PF14864 Alkyl sulfatase C-terminal RU84_RS02470 PF04386 Stringent starvation protein B RU84_RS02475 PF13417 Glutathione S-transferase, N-terminal domain RU84_RS02475 PF00043 Glutathione S-transferase, C-terminal domain RU84_RS02480 PF00380 Ribosomal protein S9/S16 RU84_RS02485 PF00572 Ribosomal protein L13 RU84_RS02490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RU84_RS02495 PF00398 Ribosomal RNA adenine dimethylase RU84_RS02500 PF00149 Calcineurin-like phosphoesterase RU84_RS02520 PF01926 50S ribosome-binding GTPase RU84_RS02520 PF13167 GTP-binding GTPase N-terminal RU84_RS02520 PF16360 GTP-binding GTPase Middle Region RU84_RS02530 PF13091 PLD-like domain RU84_RS02535 PF10518 TAT (twin-arginine translocation) pathway signal sequence RU84_RS02535 PF00149 Calcineurin-like phosphoesterase RU84_RS02540 PF00691 OmpA family RU84_RS02540 PF01389 OmpA-like transmembrane domain RU84_RS02545 PF17152 Periplasmic sensor domain RU84_RS02545 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS02580 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS02580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_RS02590 PF04273 Putative phosphatase (DUF442) RU84_RS02590 PF00753 Metallo-beta-lactamase superfamily RU84_RS02595 PF00561 alpha/beta hydrolase fold RU84_RS02600 PF00085 Thioredoxin RU84_RS02605 PF03061 Thioesterase superfamily RU84_RS02615 PF04461 Protein of unknown function (DUF520) RU84_RS02625 PF01266 FAD dependent oxidoreductase RU84_RS02625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RU84_RS02635 PF03795 YCII-related domain RU84_RS02640 PF04279 Intracellular septation protein A RU84_RS02645 PF02811 PHP domain RU84_RS02650 PF01062 Bestrophin, RFP-TM, chloride channel RU84_RS02655 PF04002 RadC-like JAB domain RU84_RS02660 PF02441 Flavoprotein RU84_RS02660 PF04127 DNA / pantothenate metabolism flavoprotein RU84_RS02665 PF07549 SecD/SecF GG Motif RU84_RS02665 PF02355 Protein export membrane protein RU84_RS02670 PF02355 Protein export membrane protein RU84_RS02670 PF13721 SecD export protein N-terminal TM region RU84_RS02670 PF07549 SecD/SecF GG Motif RU84_RS02675 PF02699 Preprotein translocase subunit RU84_RS02680 PF01702 Queuine tRNA-ribosyltransferase RU84_RS02700 PF02547 Queuosine biosynthesis protein RU84_RS02725 PF00436 Single-strand binding protein family RU84_RS02830 PF01757 Acyltransferase family RU84_RS02920 PF07689 KaiB domain RU84_RS02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS02920 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS02925 PF03710 Glutamate-ammonia ligase adenylyltransferase RU84_RS02925 PF08335 GlnD PII-uridylyltransferase RU84_RS02930 PF01063 Amino-transferase class IV RU84_RS02940 PF01522 Polysaccharide deacetylase RU84_RS02945 PF13439 Glycosyltransferase Family 4 RU84_RS02945 PF00534 Glycosyl transferases group 1 RU84_RS02955 PF16363 GDP-mannose 4,6 dehydratase RU84_RS02960 PF04321 RmlD substrate binding domain RU84_RS02965 PF00483 Nucleotidyl transferase RU84_RS02970 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RU84_RS02975 PF00535 Glycosyl transferase family 2 RU84_RS02990 PF01336 OB-fold nucleic acid binding domain RU84_RS02990 PF00152 tRNA synthetases class II (D, K and N) RU84_RS02990 PF02938 GAD domain RU84_RS03000 PF00593 TonB dependent receptor RU84_RS03000 PF07715 TonB-dependent Receptor Plug Domain RU84_RS03020 PF06146 Phosphate-starvation-inducible E RU84_RS03025 PF12806 Acetyl-CoA dehydrogenase C-terminal like RU84_RS03025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS03025 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS03025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS03030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS03030 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS03030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS03030 PF12806 Acetyl-CoA dehydrogenase C-terminal like RU84_RS03040 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS03040 PF00672 HAMP domain RU84_RS03045 PF00072 Response regulator receiver domain RU84_RS03045 PF00486 Transcriptional regulatory protein, C terminal RU84_RS03050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RU84_RS03070 PF01923 Cobalamin adenosyltransferase RU84_RS03075 PF00593 TonB dependent receptor RU84_RS03075 PF07715 TonB-dependent Receptor Plug Domain RU84_RS03080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RU84_RS03085 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS03110 PF00290 Tryptophan synthase alpha chain RU84_RS03115 PF01039 Carboxyl transferase domain RU84_RS03120 PF02875 Mur ligase family, glutamate ligase domain RU84_RS03120 PF08245 Mur ligase middle domain RU84_RS03135 PF00753 Metallo-beta-lactamase superfamily RU84_RS03140 PF10417 C-terminal domain of 1-Cys peroxiredoxin RU84_RS03140 PF00578 AhpC/TSA family RU84_RS03145 PF07517 SecA DEAD-like domain RU84_RS03145 PF02810 SEC-C motif RU84_RS03145 PF07516 SecA Wing and Scaffold domain RU84_RS03145 PF01043 SecA preprotein cross-linking domain RU84_RS03155 PF07690 Major Facilitator Superfamily RU84_RS03155 PF00083 Sugar (and other) transporter RU84_RS03160 PF03006 Haemolysin-III related RU84_RS03185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RU84_RS03185 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS03185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RU84_RS03190 PF00108 Thiolase, N-terminal domain RU84_RS03190 PF02803 Thiolase, C-terminal domain RU84_RS03195 PF02311 AraC-like ligand binding domain RU84_RS03195 PF12833 Helix-turn-helix domain RU84_RS03200 PF02515 CoA-transferase family III RU84_RS03205 PF04966 Carbohydrate-selective porin, OprB family RU84_RS03210 PF01011 PQQ enzyme repeat RU84_RS03215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RU84_RS03215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RU84_RS03225 PF00893 Small Multidrug Resistance protein RU84_RS03235 PF00108 Thiolase, N-terminal domain RU84_RS03235 PF02803 Thiolase, C-terminal domain RU84_RS03245 PF13505 Outer membrane protein beta-barrel domain RU84_RS03245 PF00691 OmpA family RU84_RS03255 PF01139 tRNA-splicing ligase RtcB RU84_RS03260 PF00324 Amino acid permease RU84_RS03265 PF08468 Methyltransferase small domain N-terminal RU84_RS03265 PF05175 Methyltransferase small domain RU84_RS03270 PF00860 Permease family RU84_RS03275 PF03144 Elongation factor Tu domain 2 RU84_RS03275 PF00679 Elongation factor G C-terminus RU84_RS03275 PF00009 Elongation factor Tu GTP binding domain RU84_RS03280 PF01741 Large-conductance mechanosensitive channel, MscL RU84_RS03295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RU84_RS03295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RU84_RS03295 PF06827 Zinc finger found in FPG and IleRS RU84_RS03300 PF02245 Methylpurine-DNA glycosylase (MPG) RU84_RS03305 PF00593 TonB dependent receptor RU84_RS03305 PF07715 TonB-dependent Receptor Plug Domain RU84_RS03310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU84_RS03325 PF10411 Disulfide bond isomerase protein N-terminus RU84_RS03325 PF13098 Thioredoxin-like domain RU84_RS03330 PF01571 Aminomethyltransferase folate-binding domain RU84_RS03340 PF04343 Protein of unknown function, DUF488 RU84_RS03345 PF03831 PhnA domain RU84_RS03345 PF08274 PhnA Zinc-Ribbon RU84_RS03350 PF07411 Domain of unknown function (DUF1508) RU84_RS03355 PF03129 Anticodon binding domain RU84_RS03355 PF04073 Aminoacyl-tRNA editing domain RU84_RS03355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RU84_RS03360 PF00873 AcrB/AcrD/AcrF family RU84_RS03375 PF00072 Response regulator receiver domain RU84_RS03380 PF00072 Response regulator receiver domain RU84_RS03385 PF01584 CheW-like domain RU84_RS03390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RU84_RS03390 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RU84_RS03395 PF00072 Response regulator receiver domain RU84_RS03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS03395 PF01627 Hpt domain RU84_RS03395 PF01584 CheW-like domain RU84_RS03405 PF06969 HemN C-terminal domain RU84_RS03405 PF04055 Radical SAM superfamily RU84_RS03415 PF01546 Peptidase family M20/M25/M40 RU84_RS03415 PF07687 Peptidase dimerisation domain RU84_RS03420 PF08085 Entericidin EcnA/B family RU84_RS03430 PF04304 Protein of unknown function (DUF454) RU84_RS03435 PF17969 L,D-transpeptidase C-terminal domain RU84_RS03435 PF03734 L,D-transpeptidase catalytic domain RU84_RS03475 PF00175 Oxidoreductase NAD-binding domain RU84_RS03475 PF00667 FAD binding domain RU84_RS03475 PF00258 Flavodoxin RU84_RS03485 PF12805 FUSC-like inner membrane protein yccS RU84_RS03490 PF07690 Major Facilitator Superfamily RU84_RS03495 PF00881 Nitroreductase family RU84_RS03505 PF01235 Sodium:alanine symporter family RU84_RS03510 PF01734 Patatin-like phospholipase RU84_RS03515 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS03515 PF13291 ACT domain RU84_RS03520 PF05992 SbmA/BacA-like family RU84_RS03525 PF05649 Peptidase family M13 RU84_RS03525 PF01431 Peptidase family M13 RU84_RS03550 PF02934 GatB/GatE catalytic domain RU84_RS03550 PF02637 GatB domain RU84_RS03555 PF01425 Amidase RU84_RS03560 PF02686 Glu-tRNAGln amidotransferase C subunit RU84_RS03570 PF04085 rod shape-determining protein MreC RU84_RS03575 PF04093 rod shape-determining protein MreD RU84_RS03580 PF02545 Maf-like protein RU84_RS03585 PF00575 S1 RNA binding domain RU84_RS03585 PF10150 Ribonuclease E/G family RU84_RS03595 PF06974 Protein of unknown function (DUF1298) RU84_RS03595 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RU84_RS03600 PF01507 Phosphoadenosine phosphosulfate reductase family RU84_RS03615 PF02525 Flavodoxin-like fold RU84_RS03635 PF02673 Bacitracin resistance protein BacA RU84_RS03640 PF12833 Helix-turn-helix domain RU84_RS03640 PF06719 AraC-type transcriptional regulator N-terminus RU84_RS03645 PF14765 Polyketide synthase dehydratase RU84_RS03645 PF02801 Beta-ketoacyl synthase, C-terminal domain RU84_RS03645 PF08659 KR domain RU84_RS03645 PF00109 Beta-ketoacyl synthase, N-terminal domain RU84_RS03645 PF16197 Ketoacyl-synthetase C-terminal extension RU84_RS03645 PF09277 Erythronolide synthase, docking RU84_RS03645 PF08990 Erythronolide synthase docking RU84_RS03645 PF08240 Alcohol dehydrogenase GroES-like domain RU84_RS03645 PF00698 Acyl transferase domain RU84_RS03645 PF00550 Phosphopantetheine attachment site RU84_RS03650 PF01965 DJ-1/PfpI family RU84_RS03660 PF00324 Amino acid permease RU84_RS03665 PF04303 PrpF protein RU84_RS03670 PF00348 Polyprenyl synthetase RU84_RS03675 PF04237 YjbR RU84_RS03680 PF01145 SPFH domain / Band 7 family RU84_RS03690 PF01734 Patatin-like phospholipase RU84_RS03710 PF08019 Phosphoethanolamine transferase EptA/EptB RU84_RS03710 PF00884 Sulfatase RU84_RS03715 PF00486 Transcriptional regulatory protein, C terminal RU84_RS03715 PF00072 Response regulator receiver domain RU84_RS03720 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS03720 PF08521 Two-component sensor kinase N-terminal RU84_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS03730 PF00909 Ammonium Transporter Family RU84_RS03735 PF03466 LysR substrate binding domain RU84_RS03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS03755 PF10458 Valyl tRNA synthetase tRNA binding arm RU84_RS03755 PF00133 tRNA synthetases class I (I, L, M and V) RU84_RS03755 PF08264 Anticodon-binding domain of tRNA RU84_RS03775 PF01906 Putative heavy-metal-binding RU84_RS03780 PF01906 Putative heavy-metal-binding RU84_RS03785 PF02321 Outer membrane efflux protein RU84_RS03790 PF00873 AcrB/AcrD/AcrF family RU84_RS03795 PF00529 HlyD membrane-fusion protein of T1SS RU84_RS03795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS03800 PF01569 PAP2 superfamily RU84_RS03810 PF00348 Polyprenyl synthetase RU84_RS03820 PF00829 Ribosomal prokaryotic L21 protein RU84_RS03825 PF01016 Ribosomal L27 protein RU84_RS03830 PF03548 Outer membrane lipoprotein carrier protein LolA RU84_RS03840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RU84_RS03840 PF02403 Seryl-tRNA synthetase N-terminal domain RU84_RS03845 PF14824 Sirohaem biosynthesis protein central RU84_RS03845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RU84_RS03845 PF10414 Sirohaem synthase dimerisation region RU84_RS03850 PF00588 SpoU rRNA Methylase family RU84_RS03855 PF01638 HxlR-like helix-turn-helix RU84_RS03860 PF03358 NADPH-dependent FMN reductase RU84_RS03865 PF13520 Amino acid permease RU84_RS03870 PF00465 Iron-containing alcohol dehydrogenase RU84_RS03880 PF03099 Biotin/lipoate A/B protein ligase family RU84_RS03885 PF04359 Protein of unknown function (DUF493) RU84_RS03890 PF04542 Sigma-70 region 2 RU84_RS03890 PF04546 Sigma-70, non-essential region RU84_RS03890 PF04539 Sigma-70 region 3 RU84_RS03890 PF03979 Sigma-70 factor, region 1.1 RU84_RS03890 PF00140 Sigma-70 factor, region 1.2 RU84_RS03890 PF04545 Sigma-70, region 4 RU84_RS03905 PF00581 Rhodanese-like domain RU84_RS03905 PF17773 UPF0176 acylphosphatase like domain RU84_RS03915 PF00285 Citrate synthase, C-terminal domain RU84_RS03920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RU84_RS03925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RU84_RS03930 PF00890 FAD binding domain RU84_RS03930 PF02910 Fumarate reductase flavoprotein C-term RU84_RS03935 PF13085 2Fe-2S iron-sulfur cluster binding domain RU84_RS03940 PF02779 Transketolase, pyrimidine binding domain RU84_RS03940 PF16078 2-oxoglutarate dehydrogenase N-terminus RU84_RS03940 PF00676 Dehydrogenase E1 component RU84_RS03940 PF16870 2-oxoglutarate dehydrogenase C-terminal RU84_RS03945 PF00364 Biotin-requiring enzyme RU84_RS03945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RU84_RS03945 PF02817 e3 binding domain RU84_RS03950 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS03950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_RS03955 PF08442 ATP-grasp domain RU84_RS03955 PF00549 CoA-ligase RU84_RS03960 PF00549 CoA-ligase RU84_RS03960 PF02629 CoA binding domain RU84_RS03965 PF00579 tRNA synthetases class I (W and Y) RU84_RS03970 PF05661 Protein of unknown function (DUF808) RU84_RS03975 PF04228 Putative neutral zinc metallopeptidase RU84_RS03980 PF00999 Sodium/hydrogen exchanger family RU84_RS03995 PF09587 Bacterial capsule synthesis protein PGA_cap RU84_RS04005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RU84_RS04010 PF00582 Universal stress protein family RU84_RS04015 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS04020 PF01042 Endoribonuclease L-PSP RU84_RS04025 PF00440 Bacterial regulatory proteins, tetR family RU84_RS04030 PF01272 Transcription elongation factor, GreA/GreB, C-term RU84_RS04030 PF03449 Transcription elongation factor, N-terminal RU84_RS04035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU84_RS04035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RU84_RS04035 PF02142 MGS-like domain RU84_RS04040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RU84_RS04040 PF00117 Glutamine amidotransferase class-I RU84_RS04055 PF01985 CRS1 / YhbY (CRM) domain RU84_RS04060 PF01728 FtsJ-like methyltransferase RU84_RS04065 PF01434 Peptidase family M41 RU84_RS04065 PF06480 FtsH Extracellular RU84_RS04065 PF17862 AAA+ lid domain RU84_RS04065 PF00004 ATPase family associated with various cellular activities (AAA) RU84_RS04070 PF00809 Pterin binding enzyme RU84_RS04090 PF09423 PhoD-like phosphatase RU84_RS04090 PF16655 PhoD-like phosphatase, N-terminal domain RU84_RS04105 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RU84_RS04105 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RU84_RS04120 PF00083 Sugar (and other) transporter RU84_RS04125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RU84_RS04125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RU84_RS04130 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RU84_RS04130 PF01266 FAD dependent oxidoreductase RU84_RS04135 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain RU84_RS04135 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain RU84_RS04140 PF00781 Diacylglycerol kinase catalytic domain RU84_RS04145 PF00149 Calcineurin-like phosphoesterase RU84_RS04155 PF00166 Chaperonin 10 Kd subunit RU84_RS04160 PF00118 TCP-1/cpn60 chaperonin family RU84_RS04165 PF01219 Prokaryotic diacylglycerol kinase RU84_RS04170 PF00753 Metallo-beta-lactamase superfamily RU84_RS04175 PF03009 Glycerophosphoryl diester phosphodiesterase family RU84_RS04180 PF00873 AcrB/AcrD/AcrF family RU84_RS04190 PF01435 Peptidase family M48 RU84_RS04195 PF01464 Transglycosylase SLT domain RU84_RS04200 PF01171 PP-loop family RU84_RS04210 PF01464 Transglycosylase SLT domain RU84_RS04210 PF00497 Bacterial extracellular solute-binding proteins, family 3 RU84_RS04215 PF01272 Transcription elongation factor, GreA/GreB, C-term RU84_RS04215 PF03449 Transcription elongation factor, N-terminal RU84_RS04230 PF13936 Helix-turn-helix domain RU84_RS04230 PF00665 Integrase core domain RU84_RS04235 PF13193 AMP-binding enzyme C-terminal domain RU84_RS04235 PF00501 AMP-binding enzyme RU84_RS04235 PF00975 Thioesterase domain RU84_RS04235 PF00550 Phosphopantetheine attachment site RU84_RS04235 PF00668 Condensation domain RU84_RS04255 PF09857 Putative toxin of bacterial toxin-antitoxin pair RU84_RS04275 PF00881 Nitroreductase family RU84_RS04290 PF02595 Glycerate kinase family RU84_RS04295 PF00384 Molybdopterin oxidoreductase RU84_RS04300 PF02634 FdhD/NarQ family RU84_RS04305 PF06803 Protein of unknown function (DUF1232) RU84_RS04310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU84_RS04310 PF11890 Domain of unknown function (DUF3410) RU84_RS04310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU84_RS04315 PF00152 tRNA synthetases class II (D, K and N) RU84_RS04325 PF18073 Rubredoxin metal binding domain RU84_RS04330 PF00324 Amino acid permease RU84_RS04340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RU84_RS04340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RU84_RS04345 PF01678 Diaminopimelate epimerase RU84_RS04350 PF01810 LysE type translocator RU84_RS04355 PF00589 Phage integrase family RU84_RS04355 PF02899 Phage integrase, N-terminal SAM-like domain RU84_RS04360 PF01012 Electron transfer flavoprotein domain RU84_RS04365 PF01012 Electron transfer flavoprotein domain RU84_RS04365 PF00766 Electron transfer flavoprotein FAD-binding domain RU84_RS04370 PF03989 DNA gyrase C-terminal domain, beta-propeller RU84_RS04370 PF00521 DNA gyrase/topoisomerase IV, subunit A RU84_RS04385 PF00535 Glycosyl transferase family 2 RU84_RS04405 PF13533 Biotin-lipoyl like RU84_RS04415 PF00266 Aminotransferase class-V RU84_RS04425 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RU84_RS04435 PF02687 FtsX-like permease family RU84_RS04435 PF12704 MacB-like periplasmic core domain RU84_RS04440 PF00005 ABC transporter RU84_RS04445 PF03772 Competence protein RU84_RS04445 PF00753 Metallo-beta-lactamase superfamily RU84_RS04455 PF03772 Competence protein RU84_RS04455 PF13567 Domain of unknown function (DUF4131) RU84_RS04455 PF00753 Metallo-beta-lactamase superfamily RU84_RS04465 PF01343 Peptidase family S49 RU84_RS04465 PF06965 Na+/H+ antiporter 1 RU84_RS04470 PF12697 Alpha/beta hydrolase family RU84_RS04475 PF00551 Formyl transferase RU84_RS04480 PF00586 AIR synthase related protein, N-terminal domain RU84_RS04480 PF02769 AIR synthase related protein, C-terminal domain RU84_RS04485 PF01594 AI-2E family transporter RU84_RS04490 PF11638 DnaA N-terminal domain RU84_RS04490 PF08299 Bacterial dnaA protein helix-turn-helix RU84_RS04490 PF00308 Bacterial dnaA protein RU84_RS04505 PF13936 Helix-turn-helix domain RU84_RS04505 PF00665 Integrase core domain RU84_RS04530 PF08032 RNA 2'-O ribose methyltransferase substrate binding RU84_RS04530 PF00588 SpoU rRNA Methylase family RU84_RS04535 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RU84_RS04545 PF00691 OmpA family RU84_RS04550 PF04052 TolB amino-terminal domain RU84_RS04550 PF07676 WD40-like Beta Propeller Repeat RU84_RS04560 PF02472 Biopolymer transport protein ExbD/TolR RU84_RS04565 PF01618 MotA/TolQ/ExbB proton channel family RU84_RS04570 PF03061 Thioesterase superfamily RU84_RS04575 PF01546 Peptidase family M20/M25/M40 RU84_RS04575 PF07687 Peptidase dimerisation domain RU84_RS04580 PF05496 Holliday junction DNA helicase RuvB P-loop domain RU84_RS04580 PF05491 RuvB C-terminal winged helix domain RU84_RS04580 PF17864 RuvB AAA lid domain RU84_RS04585 PF01330 RuvA N terminal domain RU84_RS04585 PF07499 RuvA, C-terminal domain RU84_RS04590 PF01966 HD domain RU84_RS04595 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RU84_RS04595 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RU84_RS04595 PF02769 AIR synthase related protein, C-terminal domain RU84_RS04600 PF07690 Major Facilitator Superfamily RU84_RS04610 PF01784 NIF3 (NGG1p interacting factor 3) RU84_RS04615 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS04620 PF01467 Cytidylyltransferase-like RU84_RS04620 PF00293 NUDIX domain RU84_RS04630 PF00578 AhpC/TSA family RU84_RS04645 PF06508 Queuosine biosynthesis protein QueC RU84_RS04655 PF14602 Hexapeptide repeat of succinyl-transferase RU84_RS04655 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RU84_RS04655 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS04665 PF03466 LysR substrate binding domain RU84_RS04670 PF12857 TOBE-like domain RU84_RS04670 PF00005 ABC transporter RU84_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS04695 PF01063 Amino-transferase class IV RU84_RS04700 PF02618 YceG-like family RU84_RS04705 PF02223 Thymidylate kinase RU84_RS04715 PF00890 FAD binding domain RU84_RS04715 PF02910 Fumarate reductase flavoprotein C-term RU84_RS04720 PF13180 PDZ domain RU84_RS04730 PF00009 Elongation factor Tu GTP binding domain RU84_RS04730 PF03144 Elongation factor Tu domain 2 RU84_RS04730 PF06421 GTP-binding protein LepA C-terminus RU84_RS04730 PF00679 Elongation factor G C-terminus RU84_RS04735 PF10502 Signal peptidase, peptidase S26 RU84_RS04745 PF00035 Double-stranded RNA binding motif RU84_RS04745 PF14622 Ribonuclease-III-like RU84_RS04750 PF01926 50S ribosome-binding GTPase RU84_RS04750 PF07650 KH domain RU84_RS04760 PF11967 Recombination protein O N terminal RU84_RS04760 PF02565 Recombination protein O C terminal RU84_RS04765 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RU84_RS04770 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) RU84_RS04775 PF00106 short chain dehydrogenase RU84_RS04800 PF00012 Hsp70 protein RU84_RS04810 PF00155 Aminotransferase class I and II RU84_RS04820 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS04820 PF17151 Periplasmic sensor domain RU84_RS04830 PF12344 Ultra-violet resistance protein B RU84_RS04830 PF02151 UvrB/uvrC motif RU84_RS04830 PF04851 Type III restriction enzyme, res subunit RU84_RS04830 PF00271 Helicase conserved C-terminal domain RU84_RS04830 PF17757 UvrB interaction domain RU84_RS04840 PF00892 EamA-like transporter family RU84_RS04845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RU84_RS04845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RU84_RS04860 PF01926 50S ribosome-binding GTPase RU84_RS04860 PF01018 GTP1/OBG RU84_RS04865 PF01472 PUA domain RU84_RS04865 PF00696 Amino acid kinase family RU84_RS04875 PF07759 Protein of unknown function (DUF1615) RU84_RS04880 PF01207 Dihydrouridine synthase (Dus) RU84_RS04885 PF03060 Nitronate monooxygenase RU84_RS04900 PF02350 UDP-N-acetylglucosamine 2-epimerase RU84_RS04930 PF03441 FAD binding domain of DNA photolyase RU84_RS04930 PF00875 DNA photolyase RU84_RS04935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RU84_RS04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS04945 PF00768 D-alanyl-D-alanine carboxypeptidase RU84_RS04945 PF07943 Penicillin-binding protein 5, C-terminal domain RU84_RS04955 PF03971 Monomeric isocitrate dehydrogenase RU84_RS04960 PF00849 RNA pseudouridylate synthase RU84_RS04965 PF00180 Isocitrate/isopropylmalate dehydrogenase RU84_RS04980 PF06779 Uncharacterised MFS-type transporter YbfB RU84_RS04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS04985 PF03466 LysR substrate binding domain RU84_RS04990 PF00375 Sodium:dicarboxylate symporter family RU84_RS04995 PF02567 Phenazine biosynthesis-like protein RU84_RS05000 PF05193 Peptidase M16 inactive domain RU84_RS05000 PF00675 Insulinase (Peptidase family M16) RU84_RS05025 PF02581 Thiamine monophosphate synthase RU84_RS05030 PF00202 Aminotransferase class-III RU84_RS05040 PF00849 RNA pseudouridylate synthase RU84_RS05045 PF00271 Helicase conserved C-terminal domain RU84_RS05045 PF18337 RapA N-terminal Tudor like domain RU84_RS05045 PF18339 RapA N-terminal Tudor like domain 1 RU84_RS05045 PF00176 SNF2 family N-terminal domain RU84_RS05045 PF12137 RNA polymerase recycling family C-terminal RU84_RS05055 PF00440 Bacterial regulatory proteins, tetR family RU84_RS05060 PF00970 Oxidoreductase FAD-binding domain RU84_RS05060 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS05060 PF00175 Oxidoreductase NAD-binding domain RU84_RS05065 PF00487 Fatty acid desaturase RU84_RS05070 PF02525 Flavodoxin-like fold RU84_RS05085 PF00202 Aminotransferase class-III RU84_RS05090 PF00282 Pyridoxal-dependent decarboxylase conserved domain RU84_RS05095 PF00171 Aldehyde dehydrogenase family RU84_RS05100 PF01037 Lrp/AsnC ligand binding domain RU84_RS05105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU84_RS05105 PF00205 Thiamine pyrophosphate enzyme, central domain RU84_RS05105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU84_RS05110 PF00324 Amino acid permease RU84_RS05115 PF12849 PBP superfamily domain RU84_RS05120 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS05125 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS05130 PF00005 ABC transporter RU84_RS05135 PF01343 Peptidase family S49 RU84_RS05135 PF08496 Peptidase family S49 N-terminal RU84_RS05150 PF00206 Lyase RU84_RS05150 PF08328 Adenylosuccinate lyase C-terminal RU84_RS05155 PF04356 Protein of unknown function (DUF489) RU84_RS05165 PF13344 Haloacid dehalogenase-like hydrolase RU84_RS05165 PF00293 NUDIX domain RU84_RS05170 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS05175 PF07943 Penicillin-binding protein 5, C-terminal domain RU84_RS05175 PF00768 D-alanyl-D-alanine carboxypeptidase RU84_RS05190 PF01975 Survival protein SurE RU84_RS05195 PF01551 Peptidase family M23 RU84_RS05195 PF01476 LysM domain RU84_RS05200 PF03466 LysR substrate binding domain RU84_RS05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS05205 PF05362 Lon protease (S16) C-terminal proteolytic domain RU84_RS05205 PF13654 AAA domain RU84_RS05210 PF07690 Major Facilitator Superfamily RU84_RS05215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU84_RS05220 PF13593 SBF-like CPA transporter family (DUF4137) RU84_RS05225 PF01197 Ribosomal protein L31 RU84_RS05230 PF12792 CSS motif domain associated with EAL RU84_RS05230 PF00563 EAL domain RU84_RS05240 PF04055 Radical SAM superfamily RU84_RS05245 PF08207 Elongation factor P (EF-P) KOW-like domain RU84_RS05245 PF01132 Elongation factor P (EF-P) OB domain RU84_RS05245 PF09285 Elongation factor P, C-terminal RU84_RS05250 PF13722 5TM C-terminal transporter carbon starvation CstA RU84_RS05250 PF02554 Carbon starvation protein CstA RU84_RS05255 PF04328 Selenoprotein, putative RU84_RS05265 PF16884 N-terminal domain of oxidoreductase RU84_RS05265 PF00107 Zinc-binding dehydrogenase RU84_RS05270 PF00106 short chain dehydrogenase RU84_RS05275 PF12833 Helix-turn-helix domain RU84_RS05275 PF12852 Cupin RU84_RS05290 PF02678 Pirin RU84_RS05290 PF17954 Quercetinase C-terminal cupin domain RU84_RS05295 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS05300 PF13309 HTH domain RU84_RS05300 PF08348 YheO-like PAS domain RU84_RS05310 PF00550 Phosphopantetheine attachment site RU84_RS05310 PF00668 Condensation domain RU84_RS05310 PF13193 AMP-binding enzyme C-terminal domain RU84_RS05310 PF00501 AMP-binding enzyme RU84_RS05315 PF00668 Condensation domain RU84_RS05315 PF00975 Thioesterase domain RU84_RS05315 PF00550 Phosphopantetheine attachment site RU84_RS05315 PF00501 AMP-binding enzyme RU84_RS05315 PF13193 AMP-binding enzyme C-terminal domain RU84_RS05320 PF01032 FecCD transport family RU84_RS05325 PF01032 FecCD transport family RU84_RS05330 PF00005 ABC transporter RU84_RS05335 PF01497 Periplasmic binding protein RU84_RS05340 PF07715 TonB-dependent Receptor Plug Domain RU84_RS05340 PF00593 TonB dependent receptor RU84_RS05345 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RU84_RS05350 PF00668 Condensation domain RU84_RS05350 PF00550 Phosphopantetheine attachment site RU84_RS05350 PF00501 AMP-binding enzyme RU84_RS05360 PF00857 Isochorismatase family RU84_RS05360 PF00550 Phosphopantetheine attachment site RU84_RS05365 PF00282 Pyridoxal-dependent decarboxylase conserved domain RU84_RS05375 PF00005 ABC transporter RU84_RS05380 PF00005 ABC transporter RU84_RS05385 PF00975 Thioesterase domain RU84_RS05390 PF01648 4'-phosphopantetheinyl transferase superfamily RU84_RS05390 PF17837 4'-phosphopantetheinyl transferase N-terminal domain RU84_RS05395 PF00425 chorismate binding enzyme RU84_RS05405 PF01208 Uroporphyrinogen decarboxylase (URO-D) RU84_RS05410 PF05675 Protein of unknown function (DUF817) RU84_RS05425 PF00144 Beta-lactamase RU84_RS05430 PF01227 GTP cyclohydrolase I RU84_RS05435 PF01799 [2Fe-2S] binding domain RU84_RS05435 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS05440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RU84_RS05440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RU84_RS05455 PF00218 Indole-3-glycerol phosphate synthase RU84_RS05460 PF02885 Glycosyl transferase family, helical bundle domain RU84_RS05460 PF00591 Glycosyl transferase family, a/b domain RU84_RS05465 PF00593 TonB dependent receptor RU84_RS05465 PF07715 TonB-dependent Receptor Plug Domain RU84_RS05470 PF11838 ERAP1-like C-terminal domain RU84_RS05470 PF01433 Peptidase family M1 domain RU84_RS05475 PF00117 Glutamine amidotransferase class-I RU84_RS05485 PF00854 POT family RU84_RS05490 PF00120 Glutamine synthetase, catalytic domain RU84_RS05490 PF03951 Glutamine synthetase, beta-Grasp domain RU84_RS05495 PF04345 Chorismate lyase RU84_RS05500 PF01040 UbiA prenyltransferase family RU84_RS05535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RU84_RS05535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RU84_RS05540 PF01784 NIF3 (NGG1p interacting factor 3) RU84_RS05545 PF13180 PDZ domain RU84_RS05550 PF01743 Poly A polymerase head domain RU84_RS05550 PF12627 Probable RNA and SrmB- binding site of polymerase A RU84_RS05555 PF01515 Phosphate acetyl/butaryl transferase RU84_RS05555 PF03949 Malic enzyme, NAD binding domain RU84_RS05555 PF00390 Malic enzyme, N-terminal domain RU84_RS05560 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS05560 PF03707 Bacterial signalling protein N terminal repeat RU84_RS05560 PF00563 EAL domain RU84_RS05565 PF04452 RNA methyltransferase RU84_RS05570 PF02219 Methylenetetrahydrofolate reductase RU84_RS05575 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RU84_RS05575 PF05221 S-adenosyl-L-homocysteine hydrolase RU84_RS05590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS05590 PF09317 Domain of unknown function (DUF1974) RU84_RS05590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS05595 PF04055 Radical SAM superfamily RU84_RS05600 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS05600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_RS05615 PF07690 Major Facilitator Superfamily RU84_RS05625 PF00557 Metallopeptidase family M24 RU84_RS05630 PF00318 Ribosomal protein S2 RU84_RS05635 PF00889 Elongation factor TS RU84_RS05645 PF12833 Helix-turn-helix domain RU84_RS05665 PF03330 Lytic transglycolase RU84_RS05665 PF05036 Sporulation related domain RU84_RS05670 PF13406 Transglycosylase SLT domain RU84_RS05675 PF01098 Cell cycle protein RU84_RS05685 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RU84_RS05685 PF14489 QueF-like protein RU84_RS05690 PF01061 ABC-2 type transporter RU84_RS05695 PF00005 ABC transporter RU84_RS05720 PF00464 Serine hydroxymethyltransferase RU84_RS05725 PF02321 Outer membrane efflux protein RU84_RS05730 PF00873 AcrB/AcrD/AcrF family RU84_RS05735 PF13533 Biotin-lipoyl like RU84_RS05740 PF03466 LysR substrate binding domain RU84_RS05740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS05745 PF00497 Bacterial extracellular solute-binding proteins, family 3 RU84_RS05750 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS05760 PF00005 ABC transporter RU84_RS05765 PF00893 Small Multidrug Resistance protein RU84_RS05770 PF00037 4Fe-4S binding domain RU84_RS05775 PF16325 Peptidase family U32 C-terminal domain RU84_RS05775 PF01136 Peptidase family U32 RU84_RS05780 PF00392 Bacterial regulatory proteins, gntR family RU84_RS05780 PF00155 Aminotransferase class I and II RU84_RS05785 PF02567 Phenazine biosynthesis-like protein RU84_RS05790 PF00970 Oxidoreductase FAD-binding domain RU84_RS05790 PF00175 Oxidoreductase NAD-binding domain RU84_RS05795 PF18389 TrmO C-terminal domain RU84_RS05795 PF01980 tRNA-methyltransferase O RU84_RS05805 PF00437 Type II/IV secretion system protein RU84_RS05805 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RU84_RS05815 PF00486 Transcriptional regulatory protein, C terminal RU84_RS05815 PF00072 Response regulator receiver domain RU84_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS05820 PF08521 Two-component sensor kinase N-terminal RU84_RS05820 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS05830 PF00293 NUDIX domain RU84_RS05840 PF14814 Bifunctional transglycosylase second domain RU84_RS05840 PF00905 Penicillin binding protein transpeptidase domain RU84_RS05840 PF00912 Transglycosylase RU84_RS05845 PF01513 ATP-NAD kinase RU84_RS05850 PF07023 Protein of unknown function (DUF1315) RU84_RS05855 PF00591 Glycosyl transferase family, a/b domain RU84_RS05855 PF02885 Glycosyl transferase family, helical bundle domain RU84_RS05860 PF00375 Sodium:dicarboxylate symporter family RU84_RS05865 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS05865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS05865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS05870 PF00756 Putative esterase RU84_RS05875 PF00800 Prephenate dehydratase RU84_RS05875 PF01842 ACT domain RU84_RS05875 PF01817 Chorismate mutase type II RU84_RS05880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RU84_RS05890 PF01546 Peptidase family M20/M25/M40 RU84_RS05890 PF07687 Peptidase dimerisation domain RU84_RS05895 PF00753 Metallo-beta-lactamase superfamily RU84_RS05905 PF03883 Peroxide stress protein YaaA RU84_RS05915 PF05690 Thiazole biosynthesis protein ThiG RU84_RS05925 PF04241 Protein of unknown function (DUF423) RU84_RS05930 PF04545 Sigma-70, region 4 RU84_RS05930 PF04542 Sigma-70 region 2 RU84_RS05930 PF00140 Sigma-70 factor, region 1.2 RU84_RS05940 PF00313 'Cold-shock' DNA-binding domain RU84_RS05945 PF00270 DEAD/DEAH box helicase RU84_RS05945 PF00271 Helicase conserved C-terminal domain RU84_RS05955 PF00881 Nitroreductase family RU84_RS05960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RU84_RS05960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RU84_RS05980 PF01180 Dihydroorotate dehydrogenase RU84_RS05985 PF02674 Colicin V production protein RU84_RS05990 PF00156 Phosphoribosyl transferase domain RU84_RS06005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU84_RS06005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU84_RS06010 PF01435 Peptidase family M48 RU84_RS06015 PF09424 Yqey-like protein RU84_RS06020 PF01165 Ribosomal protein S21 RU84_RS06025 PF00814 Glycoprotease family RU84_RS06045 PF00069 Protein kinase domain RU84_RS06070 PF17287 POTRA domain RU84_RS06070 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RU84_RS06070 PF08479 POTRA domain, ShlB-type RU84_RS06075 PF04829 Pre-toxin domain with VENN motif RU84_RS06075 PF05860 haemagglutination activity domain RU84_RS06075 PF05860 haemagglutination activity domain RU84_RS06075 PF13332 Hemagglutinin repeat RU84_RS06075 PF13018 Extended Signal Peptide of Type V secretion system RU84_RS06075 PF04829 Pre-toxin domain with VENN motif RU84_RS06075 PF13018 Extended Signal Peptide of Type V secretion system RU84_RS06075 PF13332 Hemagglutinin repeat RU84_RS06120 PF03466 LysR substrate binding domain RU84_RS06120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS06125 PF00202 Aminotransferase class-III RU84_RS06130 PF00171 Aldehyde dehydrogenase family RU84_RS06135 PF00324 Amino acid permease RU84_RS06165 PF04076 Bacterial OB fold (BOF) protein RU84_RS06190 PF00561 alpha/beta hydrolase fold RU84_RS06195 PF03616 Sodium/glutamate symporter RU84_RS06205 PF00392 Bacterial regulatory proteins, gntR family RU84_RS06205 PF07729 FCD domain RU84_RS06260 PF08946 Osmosensory transporter coiled coil RU84_RS06260 PF00083 Sugar (and other) transporter RU84_RS06280 PF00155 Aminotransferase class I and II RU84_RS06285 PF02080 TrkA-C domain RU84_RS06285 PF06826 Predicted Permease Membrane Region RU84_RS06300 PF04403 Paraquat-inducible protein A RU84_RS06305 PF02470 MlaD protein RU84_RS06315 PF00576 HIUase/Transthyretin family RU84_RS06325 PF00072 Response regulator receiver domain RU84_RS06325 PF00486 Transcriptional regulatory protein, C terminal RU84_RS06330 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS06330 PF00672 HAMP domain RU84_RS06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS06370 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS06370 PF08521 Two-component sensor kinase N-terminal RU84_RS06375 PF00072 Response regulator receiver domain RU84_RS06375 PF00486 Transcriptional regulatory protein, C terminal RU84_RS06395 PF01177 Asp/Glu/Hydantoin racemase RU84_RS06400 PF00892 EamA-like transporter family RU84_RS06405 PF07995 Glucose / Sorbosone dehydrogenase RU84_RS06435 PF00375 Sodium:dicarboxylate symporter family RU84_RS06445 PF16123 Hydroxyacylglutathione hydrolase C-terminus RU84_RS06445 PF00753 Metallo-beta-lactamase superfamily RU84_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS06455 PF09383 NIL domain RU84_RS06455 PF00005 ABC transporter RU84_RS06460 PF03180 NLPA lipoprotein RU84_RS06465 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RU84_RS06465 PF02843 Phosphoribosylglycinamide synthetase, C domain RU84_RS06465 PF02844 Phosphoribosylglycinamide synthetase, N domain RU84_RS06470 PF02142 MGS-like domain RU84_RS06470 PF01808 AICARFT/IMPCHase bienzyme RU84_RS06475 PF02954 Bacterial regulatory protein, Fis family RU84_RS06495 PF13932 GidA associated domain RU84_RS06495 PF01134 Glucose inhibited division protein A RU84_RS06505 PF14403 Circularly permuted ATP-grasp type 2 RU84_RS06515 PF01841 Transglutaminase-like superfamily RU84_RS06515 PF08379 Bacterial transglutaminase-like N-terminal region RU84_RS06525 PF00842 Alanine racemase, C-terminal domain RU84_RS06525 PF01168 Alanine racemase, N-terminal domain RU84_RS06530 PF03796 DnaB-like helicase C terminal domain RU84_RS06530 PF00772 DnaB-like helicase N terminal domain RU84_RS06535 PF01281 Ribosomal protein L9, N-terminal domain RU84_RS06535 PF03948 Ribosomal protein L9, C-terminal domain RU84_RS06540 PF01084 Ribosomal protein S18 RU84_RS06545 PF01250 Ribosomal protein S6 RU84_RS06550 PF01040 UbiA prenyltransferase family RU84_RS06555 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RU84_RS06560 PF00510 Cytochrome c oxidase subunit III RU84_RS06565 PF00115 Cytochrome C and Quinol oxidase polypeptide I RU84_RS06570 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RU84_RS06570 PF06481 COX Aromatic Rich Motif RU84_RS06580 PF02896 PEP-utilising enzyme, TIM barrel domain RU84_RS06580 PF00391 PEP-utilising enzyme, mobile domain RU84_RS06580 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RU84_RS06585 PF03618 Kinase/pyrophosphorylase RU84_RS06595 PF14883 Hypothetical glycosyl hydrolase family 13 RU84_RS06595 PF01522 Polysaccharide deacetylase RU84_RS06600 PF00535 Glycosyl transferase family 2 RU84_RS06605 PF13994 PgaD-like protein RU84_RS06615 PF00296 Luciferase-like monooxygenase RU84_RS06630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS06630 PF03466 LysR substrate binding domain RU84_RS06640 PF03462 PCRF domain RU84_RS06640 PF00472 RF-1 domain RU84_RS06645 PF13847 Methyltransferase domain RU84_RS06645 PF17827 PrmC N-terminal domain RU84_RS06650 PF12833 Helix-turn-helix domain RU84_RS06655 PF00106 short chain dehydrogenase RU84_RS06660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS06660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS06660 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS06665 PF13193 AMP-binding enzyme C-terminal domain RU84_RS06665 PF00501 AMP-binding enzyme RU84_RS06670 PF01613 Flavin reductase like domain RU84_RS06675 PF00899 ThiF family RU84_RS06680 PF03109 ABC1 family RU84_RS06695 PF03814 Potassium-transporting ATPase A subunit RU84_RS06705 PF02669 K+-transporting ATPase, c chain RU84_RS06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS06710 PF02702 Osmosensitive K+ channel His kinase sensor domain RU84_RS06710 PF13493 Domain of unknown function (DUF4118) RU84_RS06710 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS06715 PF00072 Response regulator receiver domain RU84_RS06715 PF00486 Transcriptional regulatory protein, C terminal RU84_RS06720 PF00120 Glutamine synthetase, catalytic domain RU84_RS06730 PF03232 Ubiquinone biosynthesis protein COQ7 RU84_RS06735 PF07690 Major Facilitator Superfamily RU84_RS06740 PF17243 POTRA domain TamA domain 1 RU84_RS06740 PF07244 Surface antigen variable number repeat RU84_RS06740 PF01103 Surface antigen RU84_RS06755 PF11791 Aconitate B N-terminal domain RU84_RS06755 PF06434 Aconitate hydratase 2 N-terminus RU84_RS06755 PF00330 Aconitase family (aconitate hydratase) RU84_RS06765 PF00520 Ion transport protein RU84_RS06765 PF00027 Cyclic nucleotide-binding domain RU84_RS06770 PF07690 Major Facilitator Superfamily RU84_RS06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS06785 PF03466 LysR substrate binding domain RU84_RS06790 PF04284 Protein of unknown function (DUF441) RU84_RS06800 PF01479 S4 domain RU84_RS06800 PF00849 RNA pseudouridylate synthase RU84_RS06815 PF01479 S4 domain RU84_RS06815 PF00849 RNA pseudouridylate synthase RU84_RS06820 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RU84_RS06825 PF08676 MutL C terminal dimerisation domain RU84_RS06825 PF01119 DNA mismatch repair protein, C-terminal domain RU84_RS06835 PF17209 Hfq protein RU84_RS06845 PF00881 Nitroreductase family RU84_RS06850 PF00149 Calcineurin-like phosphoesterase RU84_RS06855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RU84_RS06860 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RU84_RS06860 PF00749 tRNA synthetases class I (E and Q), catalytic domain RU84_RS06865 PF00117 Glutamine amidotransferase class-I RU84_RS06865 PF00958 GMP synthase C terminal domain RU84_RS06865 PF02540 NAD synthase RU84_RS06870 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RU84_RS06875 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RU84_RS06880 PF13520 Amino acid permease RU84_RS06885 PF00171 Aldehyde dehydrogenase family RU84_RS06900 PF00465 Iron-containing alcohol dehydrogenase RU84_RS06905 PF14493 Helix-turn-helix domain RU84_RS06905 PF05970 PIF1-like helicase RU84_RS06915 PF02110 Hydroxyethylthiazole kinase family RU84_RS06930 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RU84_RS06930 PF01433 Peptidase family M1 domain RU84_RS06930 PF11940 Domain of unknown function (DUF3458) Ig-like fold RU84_RS06945 PF13953 PapC C-terminal domain RU84_RS06945 PF13954 PapC N-terminal domain RU84_RS06945 PF00577 Outer membrane usher protein RU84_RS06970 PF01817 Chorismate mutase type II RU84_RS06975 PF01037 Lrp/AsnC ligand binding domain RU84_RS06995 PF00440 Bacterial regulatory proteins, tetR family RU84_RS07000 PF00593 TonB dependent receptor RU84_RS07000 PF07715 TonB-dependent Receptor Plug Domain RU84_RS07005 PF00924 Mechanosensitive ion channel RU84_RS07035 PF07715 TonB-dependent Receptor Plug Domain RU84_RS07035 PF00593 TonB dependent receptor RU84_RS07060 PF00005 ABC transporter RU84_RS07060 PF12848 ABC transporter RU84_RS07065 PF00582 Universal stress protein family RU84_RS07085 PF00690 Cation transporter/ATPase, N-terminus RU84_RS07085 PF00689 Cation transporting ATPase, C-terminus RU84_RS07090 PF02308 MgtC family RU84_RS07095 PF03594 Benzoate membrane transport protein RU84_RS07100 PF01037 Lrp/AsnC ligand binding domain RU84_RS07105 PF01810 LysE type translocator RU84_RS07110 PF00923 Transaldolase/Fructose-6-phosphate aldolase RU84_RS07110 PF13202 EF hand RU84_RS07115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS07115 PF03466 LysR substrate binding domain RU84_RS07125 PF02803 Thiolase, C-terminal domain RU84_RS07125 PF00108 Thiolase, N-terminal domain RU84_RS07135 PF01575 MaoC like domain RU84_RS07140 PF00144 Beta-lactamase RU84_RS07150 PF07690 Major Facilitator Superfamily RU84_RS07165 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RU84_RS07165 PF12170 DNA polymerase III tau subunit V interacting with alpha RU84_RS07165 PF12169 DNA polymerase III subunits gamma and tau domain III RU84_RS07170 PF04185 Phosphoesterase family RU84_RS07170 PF05506 Domain of unknown function (DUF756) RU84_RS07175 PF03061 Thioesterase superfamily RU84_RS07180 PF00465 Iron-containing alcohol dehydrogenase RU84_RS07190 PF01451 Low molecular weight phosphotyrosine protein phosphatase RU84_RS07195 PF01565 FAD binding domain RU84_RS07195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RU84_RS07220 PF01645 Conserved region in glutamate synthase RU84_RS07240 PF00665 Integrase core domain RU84_RS07240 PF13936 Helix-turn-helix domain RU84_RS07250 PF12832 MFS_1 like family RU84_RS07260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU84_RS07260 PF00289 Biotin carboxylase, N-terminal domain RU84_RS07260 PF02785 Biotin carboxylase C-terminal domain RU84_RS07265 PF00364 Biotin-requiring enzyme RU84_RS07270 PF01220 Dehydroquinase class II RU84_RS07275 PF00817 impB/mucB/samB family RU84_RS07275 PF13438 Domain of unknown function (DUF4113) RU84_RS07275 PF11799 impB/mucB/samB family C-terminal domain RU84_RS07280 PF00005 ABC transporter RU84_RS07285 PF00486 Transcriptional regulatory protein, C terminal RU84_RS07285 PF00072 Response regulator receiver domain RU84_RS07295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RU84_RS07295 PF04324 BFD-like [2Fe-2S] binding domain RU84_RS07295 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS07295 PF13806 Rieske-like [2Fe-2S] domain RU84_RS07295 PF18267 Rubredoxin NAD+ reductase C-terminal domain RU84_RS07295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RU84_RS07300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RU84_RS07300 PF04324 BFD-like [2Fe-2S] binding domain RU84_RS07300 PF18267 Rubredoxin NAD+ reductase C-terminal domain RU84_RS07300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RU84_RS07300 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS07305 PF01568 Molydopterin dinucleotide binding domain RU84_RS07305 PF00384 Molybdopterin oxidoreductase RU84_RS07305 PF04324 BFD-like [2Fe-2S] binding domain RU84_RS07305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RU84_RS07310 PF12804 MobA-like NTP transferase domain RU84_RS07315 PF00384 Molybdopterin oxidoreductase RU84_RS07315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RU84_RS07315 PF01568 Molydopterin dinucleotide binding domain RU84_RS07320 PF06463 Molybdenum Cofactor Synthesis C RU84_RS07320 PF04055 Radical SAM superfamily RU84_RS07330 PF02391 MoaE protein RU84_RS07335 PF00994 Probable molybdopterin binding domain RU84_RS07335 PF01967 MoaC family RU84_RS07340 PF03454 MoeA C-terminal region (domain IV) RU84_RS07340 PF03453 MoeA N-terminal region (domain I and II) RU84_RS07340 PF00994 Probable molybdopterin binding domain RU84_RS07345 PF01638 HxlR-like helix-turn-helix RU84_RS07350 PF00155 Aminotransferase class I and II RU84_RS07350 PF00392 Bacterial regulatory proteins, gntR family RU84_RS07355 PF00892 EamA-like transporter family RU84_RS07375 PF02635 DsrE/DsrF-like family RU84_RS07380 PF16363 GDP-mannose 4,6 dehydratase RU84_RS07385 PF00206 Lyase RU84_RS07385 PF10415 Fumarase C C-terminus RU84_RS07405 PF01266 FAD dependent oxidoreductase RU84_RS07415 PF02542 YgbB family RU84_RS07425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RU84_RS07425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RU84_RS07430 PF00440 Bacterial regulatory proteins, tetR family RU84_RS07435 PF00158 Sigma-54 interaction domain RU84_RS07435 PF00072 Response regulator receiver domain RU84_RS07435 PF02954 Bacterial regulatory protein, Fis family RU84_RS07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS07440 PF00989 PAS fold RU84_RS07440 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS07445 PF04055 Radical SAM superfamily RU84_RS07445 PF00919 Uncharacterized protein family UPF0004 RU84_RS07445 PF18693 TRAM domain RU84_RS07450 PF00696 Amino acid kinase family RU84_RS07455 PF01765 Ribosome recycling factor RU84_RS07460 PF01255 Putative undecaprenyl diphosphate synthase RU84_RS07470 PF13288 DXP reductoisomerase C-terminal domain RU84_RS07470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RU84_RS07470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RU84_RS07475 PF17820 PDZ domain RU84_RS07475 PF02163 Peptidase family M50 RU84_RS07475 PF13180 PDZ domain RU84_RS07480 PF01103 Surface antigen RU84_RS07480 PF07244 Surface antigen variable number repeat RU84_RS07490 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS07490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RU84_RS07495 PF07977 FabA-like domain RU84_RS07500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RU84_RS07500 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS07515 PF02631 RecX family RU84_RS07520 PF00154 recA bacterial DNA recombination protein RU84_RS07525 PF01479 S4 domain RU84_RS07530 PF13419 Haloacid dehalogenase-like hydrolase RU84_RS07555 PF01037 Lrp/AsnC ligand binding domain RU84_RS07560 PF00266 Aminotransferase class-V RU84_RS07565 PF00324 Amino acid permease RU84_RS07575 PF00082 Subtilase family RU84_RS07575 PF05922 Peptidase inhibitor I9 RU84_RS07580 PF01740 STAS domain RU84_RS07580 PF00916 Sulfate permease family RU84_RS07585 PF02586 SOS response associated peptidase (SRAP) RU84_RS07590 PF07995 Glucose / Sorbosone dehydrogenase RU84_RS07600 PF03707 Bacterial signalling protein N terminal repeat RU84_RS07600 PF00563 EAL domain RU84_RS07600 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS07620 PF02378 Phosphotransferase system, EIIC RU84_RS07620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RU84_RS07625 PF00294 pfkB family carbohydrate kinase RU84_RS07630 PF00391 PEP-utilising enzyme, mobile domain RU84_RS07630 PF02896 PEP-utilising enzyme, TIM barrel domain RU84_RS07630 PF00381 PTS HPr component phosphorylation site RU84_RS07630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RU84_RS07630 PF05524 PEP-utilising enzyme, N-terminal RU84_RS07655 PF05525 Branched-chain amino acid transport protein RU84_RS07660 PF00557 Metallopeptidase family M24 RU84_RS07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS07665 PF03466 LysR substrate binding domain RU84_RS07675 PF00462 Glutaredoxin RU84_RS07680 PF00202 Aminotransferase class-III RU84_RS07685 PF00478 IMP dehydrogenase / GMP reductase domain RU84_RS07685 PF00571 CBS domain RU84_RS07710 PF02881 SRP54-type protein, helical bundle domain RU84_RS07710 PF00448 SRP54-type protein, GTPase domain RU84_RS07720 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) RU84_RS07730 PF08173 Membrane bound YbgT-like protein RU84_RS07735 PF02322 Cytochrome bd terminal oxidase subunit II RU84_RS07740 PF01654 Cytochrome bd terminal oxidase subunit I RU84_RS07750 PF07290 Protein of unknown function (DUF1449) RU84_RS07760 PF00294 pfkB family carbohydrate kinase RU84_RS07765 PF07715 TonB-dependent Receptor Plug Domain RU84_RS07765 PF00593 TonB dependent receptor RU84_RS07770 PF08367 Peptidase M16C associated RU84_RS07770 PF05193 Peptidase M16 inactive domain RU84_RS07770 PF00675 Insulinase (Peptidase family M16) RU84_RS07775 PF02253 Phospholipase A1 RU84_RS07780 PF02386 Cation transport protein RU84_RS07785 PF02254 TrkA-N domain RU84_RS07785 PF02080 TrkA-C domain RU84_RS07790 PF00585 C-terminal regulatory domain of Threonine dehydratase RU84_RS07790 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS07795 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RU84_RS07810 PF02774 Semialdehyde dehydrogenase, dimerisation domain RU84_RS07810 PF01118 Semialdehyde dehydrogenase, NAD binding domain RU84_RS07820 PF02617 ATP-dependent Clp protease adaptor protein ClpS RU84_RS07825 PF07724 AAA domain (Cdc48 subfamily) RU84_RS07825 PF00004 ATPase family associated with various cellular activities (AAA) RU84_RS07825 PF02861 Clp amino terminal domain, pathogenicity island component RU84_RS07825 PF10431 C-terminal, D2-small domain, of ClpB protein RU84_RS07825 PF17871 AAA lid domain RU84_RS07830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RU84_RS07835 PF00793 DAHP synthetase I family RU84_RS07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS07850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU84_RS07880 PF00117 Glutamine amidotransferase class-I RU84_RS07880 PF06418 CTP synthase N-terminus RU84_RS07885 PF00793 DAHP synthetase I family RU84_RS07890 PF03952 Enolase, N-terminal domain RU84_RS07890 PF00113 Enolase, C-terminal TIM barrel domain RU84_RS07895 PF04239 Protein of unknown function (DUF421) RU84_RS07900 PF04977 Septum formation initiator RU84_RS07905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RU84_RS07910 PF01144 Coenzyme A transferase RU84_RS07915 PF01144 Coenzyme A transferase RU84_RS07920 PF02803 Thiolase, C-terminal domain RU84_RS07920 PF00108 Thiolase, N-terminal domain RU84_RS07925 PF00206 Lyase RU84_RS07925 PF10397 Adenylosuccinate lyase C-terminus RU84_RS07930 PF00561 alpha/beta hydrolase fold RU84_RS07935 PF07690 Major Facilitator Superfamily RU84_RS07940 PF02627 Carboxymuconolactone decarboxylase family RU84_RS07945 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RU84_RS07945 PF00775 Dioxygenase RU84_RS07950 PF00775 Dioxygenase RU84_RS07955 PF01487 Type I 3-dehydroquinase RU84_RS07960 PF05048 Periplasmic copper-binding protein (NosD) RU84_RS07965 PF04966 Carbohydrate-selective porin, OprB family RU84_RS07970 PF01011 PQQ enzyme repeat RU84_RS07970 PF13360 PQQ-like domain RU84_RS07980 PF04143 Sulphur transport RU84_RS07990 PF00753 Metallo-beta-lactamase superfamily RU84_RS07995 PF01614 Bacterial transcriptional regulator RU84_RS07995 PF09339 IclR helix-turn-helix domain RU84_RS08000 PF03466 LysR substrate binding domain RU84_RS08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS08005 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS08020 PF00106 short chain dehydrogenase RU84_RS08030 PF07690 Major Facilitator Superfamily RU84_RS08040 PF01425 Amidase RU84_RS08045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS08060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RU84_RS08060 PF00355 Rieske [2Fe-2S] domain RU84_RS08075 PF00175 Oxidoreductase NAD-binding domain RU84_RS08075 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS08080 PF01613 Flavin reductase like domain RU84_RS08085 PF02311 AraC-like ligand binding domain RU84_RS08085 PF12833 Helix-turn-helix domain RU84_RS08090 PF01179 Copper amine oxidase, enzyme domain RU84_RS08090 PF07833 Copper amine oxidase N-terminal domain RU84_RS08090 PF02727 Copper amine oxidase, N2 domain RU84_RS08090 PF02728 Copper amine oxidase, N3 domain RU84_RS08100 PF00171 Aldehyde dehydrogenase family RU84_RS08105 PF12146 Serine aminopeptidase, S33 RU84_RS08110 PF00108 Thiolase, N-terminal domain RU84_RS08110 PF02803 Thiolase, C-terminal domain RU84_RS08115 PF01144 Coenzyme A transferase RU84_RS08120 PF01144 Coenzyme A transferase RU84_RS08125 PF04444 Catechol dioxygenase N terminus RU84_RS08125 PF00775 Dioxygenase RU84_RS08130 PF02426 Muconolactone delta-isomerase RU84_RS08135 PF13378 Enolase C-terminal domain-like RU84_RS08135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RU84_RS08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08140 PF03466 LysR substrate binding domain RU84_RS08150 PF00392 Bacterial regulatory proteins, gntR family RU84_RS08150 PF07729 FCD domain RU84_RS08155 PF00920 Dehydratase family RU84_RS08160 PF07690 Major Facilitator Superfamily RU84_RS08170 PF00171 Aldehyde dehydrogenase family RU84_RS08180 PF00561 alpha/beta hydrolase fold RU84_RS08185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU84_RS08185 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS08200 PF13411 MerR HTH family regulatory protein RU84_RS08210 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS08225 PF12706 Beta-lactamase superfamily domain RU84_RS08230 PF08359 YsiA-like protein, C-terminal region RU84_RS08230 PF00440 Bacterial regulatory proteins, tetR family RU84_RS08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08235 PF03466 LysR substrate binding domain RU84_RS08250 PF00106 short chain dehydrogenase RU84_RS08255 PF01575 MaoC like domain RU84_RS08260 PF12806 Acetyl-CoA dehydrogenase C-terminal like RU84_RS08260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS08260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS08260 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS08270 PF00501 AMP-binding enzyme RU84_RS08270 PF13193 AMP-binding enzyme C-terminal domain RU84_RS08315 PF13936 Helix-turn-helix domain RU84_RS08315 PF00665 Integrase core domain RU84_RS08320 PF13936 Helix-turn-helix domain RU84_RS08320 PF00665 Integrase core domain RU84_RS08325 PF07690 Major Facilitator Superfamily RU84_RS08330 PF04909 Amidohydrolase RU84_RS08340 PF00392 Bacterial regulatory proteins, gntR family RU84_RS08340 PF07702 UTRA domain RU84_RS08345 PF08450 SMP-30/Gluconolactonase/LRE-like region RU84_RS08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08355 PF03466 LysR substrate binding domain RU84_RS08375 PF00529 HlyD membrane-fusion protein of T1SS RU84_RS08375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS08390 PF00171 Aldehyde dehydrogenase family RU84_RS08395 PF00920 Dehydratase family RU84_RS08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08405 PF03466 LysR substrate binding domain RU84_RS08410 PF01370 NAD dependent epimerase/dehydratase family RU84_RS08415 PF07690 Major Facilitator Superfamily RU84_RS08420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RU84_RS08420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RU84_RS08425 PF06719 AraC-type transcriptional regulator N-terminus RU84_RS08425 PF12833 Helix-turn-helix domain RU84_RS08430 PF00107 Zinc-binding dehydrogenase RU84_RS08430 PF08240 Alcohol dehydrogenase GroES-like domain RU84_RS08440 PF01032 FecCD transport family RU84_RS08445 PF00005 ABC transporter RU84_RS08465 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RU84_RS08465 PF14572 Phosphoribosyl synthetase-associated domain RU84_RS08470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RU84_RS08485 PF13533 Biotin-lipoyl like RU84_RS08490 PF07690 Major Facilitator Superfamily RU84_RS08515 PF01975 Survival protein SurE RU84_RS08525 PF04607 Region found in RelA / SpoT proteins RU84_RS08525 PF02824 TGS domain RU84_RS08525 PF13291 ACT domain RU84_RS08550 PF13673 Acetyltransferase (GNAT) domain RU84_RS08555 PF12146 Serine aminopeptidase, S33 RU84_RS08560 PF03466 LysR substrate binding domain RU84_RS08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08575 PF12146 Serine aminopeptidase, S33 RU84_RS08580 PF02311 AraC-like ligand binding domain RU84_RS08580 PF12833 Helix-turn-helix domain RU84_RS08590 PF16527 Two-component sensor protein CpxA, periplasmic domain RU84_RS08590 PF00672 HAMP domain RU84_RS08590 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS08595 PF00486 Transcriptional regulatory protein, C terminal RU84_RS08595 PF00072 Response regulator receiver domain RU84_RS08600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS08600 PF00529 HlyD membrane-fusion protein of T1SS RU84_RS08605 PF00873 AcrB/AcrD/AcrF family RU84_RS08610 PF17760 UvrA interaction domain RU84_RS08610 PF17755 UvrA DNA-binding domain RU84_RS08610 PF00005 ABC transporter RU84_RS08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08620 PF03466 LysR substrate binding domain RU84_RS08625 PF01144 Coenzyme A transferase RU84_RS08630 PF01144 Coenzyme A transferase RU84_RS08635 PF02667 Short chain fatty acid transporter RU84_RS08640 PF00108 Thiolase, N-terminal domain RU84_RS08640 PF02803 Thiolase, C-terminal domain RU84_RS08645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08645 PF03466 LysR substrate binding domain RU84_RS08650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS08650 PF03466 LysR substrate binding domain RU84_RS08665 PF10415 Fumarase C C-terminus RU84_RS08665 PF00206 Lyase RU84_RS08670 PF07715 TonB-dependent Receptor Plug Domain RU84_RS08670 PF00593 TonB dependent receptor RU84_RS08675 PF00083 Sugar (and other) transporter RU84_RS08690 PF00005 ABC transporter RU84_RS08695 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS08700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RU84_RS08715 PF07702 UTRA domain RU84_RS08715 PF00392 Bacterial regulatory proteins, gntR family RU84_RS08720 PF02417 Chromate transporter RU84_RS08725 PF02525 Flavodoxin-like fold RU84_RS08730 PF01638 HxlR-like helix-turn-helix RU84_RS08735 PF06445 GyrI-like small molecule binding domain RU84_RS08735 PF12833 Helix-turn-helix domain RU84_RS08750 PF01925 Sulfite exporter TauE/SafE RU84_RS08755 PF04273 Putative phosphatase (DUF442) RU84_RS08755 PF00753 Metallo-beta-lactamase superfamily RU84_RS08760 PF00753 Metallo-beta-lactamase superfamily RU84_RS08765 PF02954 Bacterial regulatory protein, Fis family RU84_RS08765 PF00158 Sigma-54 interaction domain RU84_RS08765 PF00072 Response regulator receiver domain RU84_RS08770 PF01062 Bestrophin, RFP-TM, chloride channel RU84_RS08775 PF08240 Alcohol dehydrogenase GroES-like domain RU84_RS08775 PF00107 Zinc-binding dehydrogenase RU84_RS08780 PF00106 short chain dehydrogenase RU84_RS08785 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS08785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_RS08790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RU84_RS08790 PF00364 Biotin-requiring enzyme RU84_RS08790 PF02817 e3 binding domain RU84_RS08795 PF02780 Transketolase, C-terminal domain RU84_RS08795 PF02779 Transketolase, pyrimidine binding domain RU84_RS08800 PF00676 Dehydrogenase E1 component RU84_RS08805 PF04055 Radical SAM superfamily RU84_RS08820 PF08448 PAS fold RU84_RS08820 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS08825 PF01264 Chorismate synthase RU84_RS08830 PF05175 Methyltransferase small domain RU84_RS08835 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS08845 PF00570 HRDC domain RU84_RS08845 PF01612 3'-5' exonuclease RU84_RS08850 PF02132 RecR protein RU84_RS08850 PF13662 Toprim domain RU84_RS08855 PF02575 YbaB/EbfC DNA-binding family RU84_RS08865 PF01053 Cys/Met metabolism PLP-dependent enzyme RU84_RS08870 PF00561 alpha/beta hydrolase fold RU84_RS08875 PF08241 Methyltransferase domain RU84_RS08905 PF01230 HIT domain RU84_RS08940 PF00005 ABC transporter RU84_RS08945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS08955 PF02684 Lipid-A-disaccharide synthetase RU84_RS08960 PF07715 TonB-dependent Receptor Plug Domain RU84_RS08960 PF00593 TonB dependent receptor RU84_RS08980 PF01925 Sulfite exporter TauE/SafE RU84_RS08985 PF00793 DAHP synthetase I family RU84_RS08990 PF02654 Cobalamin-5-phosphate synthase RU84_RS09000 PF00300 Histidine phosphatase superfamily (branch 1) RU84_RS09005 PF02277 Phosphoribosyltransferase RU84_RS09010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RU84_RS09020 PF13419 Haloacid dehalogenase-like hydrolase RU84_RS09045 PF00593 TonB dependent receptor RU84_RS09045 PF07715 TonB-dependent Receptor Plug Domain RU84_RS09050 PF03737 Aldolase/RraA RU84_RS09060 PF06276 Ferric iron reductase FhuF-like transporter RU84_RS09060 PF04183 IucA / IucC family RU84_RS09065 PF04183 IucA / IucC family RU84_RS09065 PF06276 Ferric iron reductase FhuF-like transporter RU84_RS09070 PF07690 Major Facilitator Superfamily RU84_RS09075 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RU84_RS09080 PF06276 Ferric iron reductase FhuF-like transporter RU84_RS09080 PF04183 IucA / IucC family RU84_RS09085 PF04073 Aminoacyl-tRNA editing domain RU84_RS09095 PF03109 ABC1 family RU84_RS09100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS09100 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS09100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS09105 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS09105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS09105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS09110 PF00487 Fatty acid desaturase RU84_RS09115 PF12852 Cupin RU84_RS09115 PF12833 Helix-turn-helix domain RU84_RS09120 PF00639 PPIC-type PPIASE domain RU84_RS09120 PF09312 SurA N-terminal domain RU84_RS09125 PF00216 Bacterial DNA-binding protein RU84_RS09140 PF02082 Transcriptional regulator RU84_RS09145 PF00266 Aminotransferase class-V RU84_RS09150 PF01592 NifU-like N terminal domain RU84_RS09155 PF01521 Iron-sulphur cluster biosynthesis RU84_RS09160 PF00226 DnaJ domain RU84_RS09160 PF07743 HSCB C-terminal oligomerisation domain RU84_RS09165 PF00012 Hsp70 protein RU84_RS09170 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS09175 PF00211 Adenylate and Guanylate cyclase catalytic domain RU84_RS09185 PF03461 TRCF domain RU84_RS09185 PF02559 CarD-like/TRCF domain RU84_RS09185 PF17757 UvrB interaction domain RU84_RS09185 PF00271 Helicase conserved C-terminal domain RU84_RS09185 PF00270 DEAD/DEAH box helicase RU84_RS09205 PF03737 Aldolase/RraA RU84_RS09210 PF13460 NAD(P)H-binding RU84_RS09215 PF01649 Ribosomal protein S20 RU84_RS09225 PF00459 Inositol monophosphatase family RU84_RS09240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RU84_RS09240 PF00005 ABC transporter RU84_RS09245 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS09250 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS09255 PF01432 Peptidase family M3 RU84_RS09270 PF00593 TonB dependent receptor RU84_RS09270 PF07715 TonB-dependent Receptor Plug Domain RU84_RS09280 PF01618 MotA/TolQ/ExbB proton channel family RU84_RS09285 PF02472 Biopolymer transport protein ExbD/TolR RU84_RS09290 PF02472 Biopolymer transport protein ExbD/TolR RU84_RS09295 PF01274 Malate synthase RU84_RS09300 PF03969 AFG1-like ATPase RU84_RS09310 PF00743 Flavin-binding monooxygenase-like RU84_RS09320 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RU84_RS09330 PF00216 Bacterial DNA-binding protein RU84_RS09335 PF00575 S1 RNA binding domain RU84_RS09340 PF02224 Cytidylate kinase RU84_RS09350 PF14437 MafB19-like deaminase RU84_RS09360 PF03167 Uracil DNA glycosylase superfamily RU84_RS09370 PF03934 Type II secretion system (T2SS), protein K RU84_RS09375 PF07963 Prokaryotic N-terminal methylation motif RU84_RS09375 PF11612 Type II secretion system (T2SS), protein J RU84_RS09380 PF07963 Prokaryotic N-terminal methylation motif RU84_RS09380 PF02501 Type II secretion system (T2SS), protein I RU84_RS09395 PF01026 TatD related DNase RU84_RS09405 PF09115 DNA polymerase III, delta subunit, C terminal RU84_RS09410 PF02348 Cytidylyltransferase RU84_RS09415 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RU84_RS09420 PF00664 ABC transporter transmembrane region RU84_RS09420 PF00005 ABC transporter RU84_RS09430 PF01618 MotA/TolQ/ExbB proton channel family RU84_RS09435 PF17762 HTH domain found in ParB protein RU84_RS09435 PF02195 ParB-like nuclease domain RU84_RS09440 PF13614 AAA domain RU84_RS09445 PF02527 rRNA small subunit methyltransferase G RU84_RS09450 PF00483 Nucleotidyl transferase RU84_RS09455 PF01636 Phosphotransferase enzyme family RU84_RS09460 PF03968 OstA-like protein RU84_RS09460 PF04453 LPS transport system D RU84_RS09465 PF09312 SurA N-terminal domain RU84_RS09465 PF00639 PPIC-type PPIASE domain RU84_RS09470 PF01116 Fructose-bisphosphate aldolase class-II RU84_RS09480 PF00162 Phosphoglycerate kinase RU84_RS09490 PF02545 Maf-like protein RU84_RS09495 PF08007 Cupin superfamily protein RU84_RS09510 PF00375 Sodium:dicarboxylate symporter family RU84_RS09515 PF06912 Protein of unknown function (DUF1275) RU84_RS09520 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) RU84_RS09525 PF00664 ABC transporter transmembrane region RU84_RS09525 PF00005 ABC transporter RU84_RS09535 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RU84_RS09535 PF12833 Helix-turn-helix domain RU84_RS09540 PF01597 Glycine cleavage H-protein RU84_RS09545 PF02146 Sir2 family RU84_RS09550 PF00474 Sodium:solute symporter family RU84_RS09555 PF01037 Lrp/AsnC ligand binding domain RU84_RS09560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RU84_RS09560 PF14850 DNA-binding domain of Proline dehydrogenase RU84_RS09560 PF01619 Proline dehydrogenase RU84_RS09560 PF00171 Aldehyde dehydrogenase family RU84_RS09565 PF04229 GrpB protein RU84_RS09570 PF05958 tRNA (Uracil-5-)-methyltransferase RU84_RS09580 PF09992 Phosphodiester glycosidase RU84_RS09590 PF04264 YceI-like domain RU84_RS09600 PF02779 Transketolase, pyrimidine binding domain RU84_RS09600 PF00456 Transketolase, thiamine diphosphate binding domain RU84_RS09600 PF02780 Transketolase, C-terminal domain RU84_RS09605 PF02772 S-adenosylmethionine synthetase, central domain RU84_RS09605 PF00438 S-adenosylmethionine synthetase, N-terminal domain RU84_RS09605 PF02773 S-adenosylmethionine synthetase, C-terminal domain RU84_RS09625 PF00905 Penicillin binding protein transpeptidase domain RU84_RS09640 PF02075 Crossover junction endodeoxyribonuclease RuvC RU84_RS09645 PF01256 Carbohydrate kinase RU84_RS09645 PF03853 YjeF-related protein N-terminus RU84_RS09650 PF08331 Domain of unknown function (DUF1730) RU84_RS09655 PF06968 Biotin and Thiamin Synthesis associated domain RU84_RS09655 PF04055 Radical SAM superfamily RU84_RS09670 PF16970 Type-1 fimbrial protein, A RU84_RS09675 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RU84_RS09675 PF02753 Pili assembly chaperone PapD, C-terminal domain RU84_RS09680 PF13954 PapC N-terminal domain RU84_RS09680 PF13953 PapC C-terminal domain RU84_RS09680 PF00577 Outer membrane usher protein RU84_RS09700 PF00892 EamA-like transporter family RU84_RS09710 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RU84_RS09720 PF03466 LysR substrate binding domain RU84_RS09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS09755 PF01709 Transcriptional regulator RU84_RS09760 PF01037 Lrp/AsnC ligand binding domain RU84_RS09770 PF00005 ABC transporter RU84_RS09775 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS09780 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS09795 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS09795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS09805 PF00296 Luciferase-like monooxygenase RU84_RS09810 PF03180 NLPA lipoprotein RU84_RS09815 PF03180 NLPA lipoprotein RU84_RS09820 PF00005 ABC transporter RU84_RS09820 PF09383 NIL domain RU84_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS09830 PF01926 50S ribosome-binding GTPase RU84_RS09830 PF06071 Protein of unknown function (DUF933) RU84_RS09855 PF03591 AzlC protein RU84_RS09860 PF05437 Branched-chain amino acid transport protein (AzlD) RU84_RS09870 PF02222 ATP-grasp domain RU84_RS09875 PF08335 GlnD PII-uridylyltransferase RU84_RS09875 PF01966 HD domain RU84_RS09875 PF01909 Nucleotidyltransferase domain RU84_RS09885 PF00155 Aminotransferase class I and II RU84_RS09895 PF12852 Cupin RU84_RS09895 PF12833 Helix-turn-helix domain RU84_RS09900 PF00255 Glutathione peroxidase RU84_RS09905 PF01641 SelR domain RU84_RS09910 PF00155 Aminotransferase class I and II RU84_RS09915 PF00375 Sodium:dicarboxylate symporter family RU84_RS09920 PF00710 Asparaginase, N-terminal RU84_RS09920 PF17763 Glutaminase/Asparaginase C-terminal domain RU84_RS09925 PF01336 OB-fold nucleic acid binding domain RU84_RS09925 PF07733 Bacterial DNA polymerase III alpha NTPase domain RU84_RS09925 PF14579 Helix-hairpin-helix motif RU84_RS09925 PF02811 PHP domain RU84_RS09925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RU84_RS09930 PF00588 SpoU rRNA Methylase family RU84_RS09935 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS09950 PF13192 Thioredoxin domain RU84_RS09950 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS09965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS09965 PF03466 LysR substrate binding domain RU84_RS09970 PF01758 Sodium Bile acid symporter family RU84_RS09975 PF01022 Bacterial regulatory protein, arsR family RU84_RS09980 PF03960 ArsC family RU84_RS09990 PF01979 Amidohydrolase family RU84_RS09990 PF13382 Adenine deaminase C-terminal domain RU84_RS10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10000 PF03466 LysR substrate binding domain RU84_RS10010 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RU84_RS10015 PF01177 Asp/Glu/Hydantoin racemase RU84_RS10020 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RU84_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS10030 PF00005 ABC transporter RU84_RS10035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RU84_RS10045 PF00083 Sugar (and other) transporter RU84_RS10050 PF00296 Luciferase-like monooxygenase RU84_RS10065 PF01654 Cytochrome bd terminal oxidase subunit I RU84_RS10070 PF02322 Cytochrome bd terminal oxidase subunit II RU84_RS10080 PF00392 Bacterial regulatory proteins, gntR family RU84_RS10080 PF00155 Aminotransferase class I and II RU84_RS10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10085 PF03466 LysR substrate binding domain RU84_RS10100 PF00698 Acyl transferase domain RU84_RS10105 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG RU84_RS10115 PF01039 Carboxyl transferase domain RU84_RS10120 PF06857 Malonate decarboxylase delta subunit (MdcD) RU84_RS10125 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RU84_RS10130 PF16957 Malonate decarboxylase, alpha subunit, transporter RU84_RS10135 PF03466 LysR substrate binding domain RU84_RS10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10145 PF07690 Major Facilitator Superfamily RU84_RS10160 PF00392 Bacterial regulatory proteins, gntR family RU84_RS10160 PF00155 Aminotransferase class I and II RU84_RS10165 PF04172 LrgB-like family RU84_RS10170 PF03788 LrgA family RU84_RS10175 PF03466 LysR substrate binding domain RU84_RS10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10180 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS10180 PF14834 Glutathione S-transferase, C-terminal domain RU84_RS10185 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10190 PF03466 LysR substrate binding domain RU84_RS10200 PF00665 Integrase core domain RU84_RS10200 PF13936 Helix-turn-helix domain RU84_RS10205 PF00581 Rhodanese-like domain RU84_RS10210 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS10220 PF00266 Aminotransferase class-V RU84_RS10225 PF01810 LysE type translocator RU84_RS10230 PF03466 LysR substrate binding domain RU84_RS10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10235 PF00497 Bacterial extracellular solute-binding proteins, family 3 RU84_RS10240 PF00497 Bacterial extracellular solute-binding proteins, family 3 RU84_RS10245 PF00005 ABC transporter RU84_RS10250 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS10255 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS10265 PF00072 Response regulator receiver domain RU84_RS10270 PF09308 LuxQ, periplasmic RU84_RS10270 PF00072 Response regulator receiver domain RU84_RS10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS10270 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS10280 PF13404 AsnC-type helix-turn-helix domain RU84_RS10280 PF01037 Lrp/AsnC ligand binding domain RU84_RS10290 PF00717 Peptidase S24-like RU84_RS10305 PF00665 Integrase core domain RU84_RS10305 PF13936 Helix-turn-helix domain RU84_RS10320 PF06628 Catalase-related immune-responsive RU84_RS10320 PF18011 C-terminal domain found in long catalases RU84_RS10320 PF00199 Catalase RU84_RS10330 PF18146 Damage-inducible protein CinA KH domain RU84_RS10330 PF00994 Probable molybdopterin binding domain RU84_RS10330 PF02464 Competence-damaged protein RU84_RS10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10365 PF03466 LysR substrate binding domain RU84_RS10385 PF00501 AMP-binding enzyme RU84_RS10385 PF13193 AMP-binding enzyme C-terminal domain RU84_RS10390 PF00440 Bacterial regulatory proteins, tetR family RU84_RS10395 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS10395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS10395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS10400 PF01039 Carboxyl transferase domain RU84_RS10405 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS10410 PF00289 Biotin carboxylase, N-terminal domain RU84_RS10410 PF18140 Propionyl-coenzyme A carboxylase BT domain RU84_RS10410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU84_RS10410 PF02785 Biotin carboxylase C-terminal domain RU84_RS10410 PF00364 Biotin-requiring enzyme RU84_RS10415 PF00682 HMGL-like RU84_RS10420 PF03466 LysR substrate binding domain RU84_RS10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS10435 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS10435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS10435 PF12806 Acetyl-CoA dehydrogenase C-terminal like RU84_RS10445 PF07690 Major Facilitator Superfamily RU84_RS10455 PF01144 Coenzyme A transferase RU84_RS10460 PF01144 Coenzyme A transferase RU84_RS10465 PF07690 Major Facilitator Superfamily RU84_RS10470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS10470 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS10470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS10475 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS10485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RU84_RS10485 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RU84_RS10485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RU84_RS10490 PF00108 Thiolase, N-terminal domain RU84_RS10490 PF02803 Thiolase, C-terminal domain RU84_RS10495 PF09339 IclR helix-turn-helix domain RU84_RS10500 PF07690 Major Facilitator Superfamily RU84_RS10505 PF03060 Nitronate monooxygenase RU84_RS10510 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS10515 PF09339 IclR helix-turn-helix domain RU84_RS10520 PF02515 CoA-transferase family III RU84_RS10525 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS10525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS10525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS10530 PF07690 Major Facilitator Superfamily RU84_RS10535 PF13419 Haloacid dehalogenase-like hydrolase RU84_RS10540 PF00266 Aminotransferase class-V RU84_RS10545 PF01266 FAD dependent oxidoreductase RU84_RS10550 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS10555 PF08402 TOBE domain RU84_RS10555 PF00005 ABC transporter RU84_RS10565 PF07702 UTRA domain RU84_RS10565 PF00392 Bacterial regulatory proteins, gntR family RU84_RS10575 PF00842 Alanine racemase, C-terminal domain RU84_RS10575 PF01168 Alanine racemase, N-terminal domain RU84_RS10580 PF01494 FAD binding domain RU84_RS10585 PF09339 IclR helix-turn-helix domain RU84_RS10585 PF01614 Bacterial transcriptional regulator RU84_RS10590 PF02525 Flavodoxin-like fold RU84_RS10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10595 PF03466 LysR substrate binding domain RU84_RS10600 PF02627 Carboxymuconolactone decarboxylase family RU84_RS10605 PF00171 Aldehyde dehydrogenase family RU84_RS10615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RU84_RS10620 PF00171 Aldehyde dehydrogenase family RU84_RS10625 PF00296 Luciferase-like monooxygenase RU84_RS10630 PF01613 Flavin reductase like domain RU84_RS10635 PF12697 Alpha/beta hydrolase family RU84_RS10655 PF01292 Prokaryotic cytochrome b561 RU84_RS10660 PF00199 Catalase RU84_RS10665 PF07690 Major Facilitator Superfamily RU84_RS10670 PF00682 HMGL-like RU84_RS10675 PF02515 CoA-transferase family III RU84_RS10700 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RU84_RS10705 PF03061 Thioesterase superfamily RU84_RS10710 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS10715 PF08223 PaaX-like protein C-terminal domain RU84_RS10715 PF07848 PaaX-like protein RU84_RS10720 PF00501 AMP-binding enzyme RU84_RS10720 PF14535 AMP-binding enzyme C-terminal domain RU84_RS10725 PF00108 Thiolase, N-terminal domain RU84_RS10725 PF02803 Thiolase, C-terminal domain RU84_RS10730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RU84_RS10730 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RU84_RS10730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RU84_RS10735 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS10740 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS10745 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS10745 PF00970 Oxidoreductase FAD-binding domain RU84_RS10745 PF00175 Oxidoreductase NAD-binding domain RU84_RS10750 PF01883 Iron-sulfur cluster assembly protein RU84_RS10755 PF05138 Phenylacetic acid catabolic protein RU84_RS10760 PF06243 Phenylacetic acid degradation B RU84_RS10765 PF05138 Phenylacetic acid catabolic protein RU84_RS10770 PF01575 MaoC like domain RU84_RS10770 PF00171 Aldehyde dehydrogenase family RU84_RS10775 PF03313 Serine dehydratase alpha chain RU84_RS10775 PF03315 Serine dehydratase beta chain RU84_RS10780 PF13520 Amino acid permease RU84_RS10785 PF00171 Aldehyde dehydrogenase family RU84_RS10790 PF00083 Sugar (and other) transporter RU84_RS10800 PF04324 BFD-like [2Fe-2S] binding domain RU84_RS10800 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS10810 PF01266 FAD dependent oxidoreductase RU84_RS10815 PF05544 Proline racemase RU84_RS10820 PF00392 Bacterial regulatory proteins, gntR family RU84_RS10830 PF00701 Dihydrodipicolinate synthetase family RU84_RS10840 PF00376 MerR family regulatory protein RU84_RS10840 PF09278 MerR, DNA binding RU84_RS10855 PF13936 Helix-turn-helix domain RU84_RS10855 PF00665 Integrase core domain RU84_RS10870 PF00654 Voltage gated chloride channel RU84_RS10875 PF02785 Biotin carboxylase C-terminal domain RU84_RS10875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU84_RS10875 PF00364 Biotin-requiring enzyme RU84_RS10875 PF00289 Biotin carboxylase, N-terminal domain RU84_RS10885 PF07286 Protein of unknown function (DUF1445) RU84_RS10890 PF03746 LamB/YcsF family RU84_RS10895 PF01566 Natural resistance-associated macrophage protein RU84_RS10900 PF03466 LysR substrate binding domain RU84_RS10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS10940 PF05593 RHS Repeat RU84_RS10940 PF03527 RHS protein RU84_RS10945 PF13296 Putative type VI secretion system Rhs element Vgr RU84_RS10945 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) RU84_RS10945 PF04717 Type VI secretion system, phage-baseplate injector RU84_RS10955 PF13419 Haloacid dehalogenase-like hydrolase RU84_RS10970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RU84_RS10970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RU84_RS10990 PF07690 Major Facilitator Superfamily RU84_RS11005 PF01544 CorA-like Mg2+ transporter protein RU84_RS11010 PF03279 Bacterial lipid A biosynthesis acyltransferase RU84_RS11015 PF00360 Phytochrome region RU84_RS11015 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS11015 PF00563 EAL domain RU84_RS11015 PF01590 GAF domain RU84_RS11020 PF00892 EamA-like transporter family RU84_RS11025 PF01037 Lrp/AsnC ligand binding domain RU84_RS11030 PF00488 MutS domain V RU84_RS11030 PF05188 MutS domain II RU84_RS11030 PF05192 MutS domain III RU84_RS11030 PF01624 MutS domain I RU84_RS11030 PF05190 MutS family domain IV RU84_RS11040 PF00037 4Fe-4S binding domain RU84_RS11040 PF11953 Domain of unknown function (DUF3470) RU84_RS11050 PF01596 O-methyltransferase RU84_RS11060 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS11065 PF01205 Uncharacterized protein family UPF0029 RU84_RS11075 PF00664 ABC transporter transmembrane region RU84_RS11075 PF03412 Peptidase C39 family RU84_RS11075 PF00005 ABC transporter RU84_RS11080 PF02321 Outer membrane efflux protein RU84_RS11085 PF12399 Branched-chain amino acid ATP-binding cassette transporter RU84_RS11085 PF00005 ABC transporter RU84_RS11090 PF03968 OstA-like protein RU84_RS11105 PF00571 CBS domain RU84_RS11105 PF01380 SIS domain RU84_RS11110 PF09190 DALR domain RU84_RS11110 PF01406 tRNA synthetases class I (C) catalytic domain RU84_RS11145 PF01638 HxlR-like helix-turn-helix RU84_RS11150 PF07690 Major Facilitator Superfamily RU84_RS11170 PF14748 Pyrroline-5-carboxylate reductase dimerisation RU84_RS11170 PF03807 NADP oxidoreductase coenzyme F420-dependent RU84_RS11180 PF00313 'Cold-shock' DNA-binding domain RU84_RS11185 PF01810 LysE type translocator RU84_RS11215 PF02601 Exonuclease VII, large subunit RU84_RS11215 PF13742 OB-fold nucleic acid binding domain RU84_RS11250 PF09278 MerR, DNA binding RU84_RS11250 PF00376 MerR family regulatory protein RU84_RS11255 PF00403 Heavy-metal-associated domain RU84_RS11265 PF02830 V4R domain RU84_RS11265 PF02954 Bacterial regulatory protein, Fis family RU84_RS11265 PF00158 Sigma-54 interaction domain RU84_RS11265 PF06505 Activator of aromatic catabolism RU84_RS11270 PF06099 Phenol hydroxylase subunit RU84_RS11275 PF02332 Methane/Phenol/Toluene Hydroxylase RU84_RS11280 PF02406 MmoB/DmpM family RU84_RS11285 PF02332 Methane/Phenol/Toluene Hydroxylase RU84_RS11285 PF04945 YHS domain RU84_RS11295 PF00175 Oxidoreductase NAD-binding domain RU84_RS11295 PF00970 Oxidoreductase FAD-binding domain RU84_RS11295 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS11305 PF03466 LysR substrate binding domain RU84_RS11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS11310 PF00355 Rieske [2Fe-2S] domain RU84_RS11310 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RU84_RS11315 PF00866 Ring hydroxylating beta subunit RU84_RS11320 PF00175 Oxidoreductase NAD-binding domain RU84_RS11320 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS11320 PF00970 Oxidoreductase FAD-binding domain RU84_RS11325 PF00106 short chain dehydrogenase RU84_RS11330 PF03594 Benzoate membrane transport protein RU84_RS11335 PF07690 Major Facilitator Superfamily RU84_RS11345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RU84_RS11345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RU84_RS11350 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RU84_RS11350 PF00270 DEAD/DEAH box helicase RU84_RS11350 PF04408 Helicase associated domain (HA2) RU84_RS11350 PF11898 Domain of unknown function (DUF3418) RU84_RS11350 PF00271 Helicase conserved C-terminal domain RU84_RS11355 PF10417 C-terminal domain of 1-Cys peroxiredoxin RU84_RS11355 PF00578 AhpC/TSA family RU84_RS11375 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS11375 PF13192 Thioredoxin domain RU84_RS11385 PF00043 Glutathione S-transferase, C-terminal domain RU84_RS11385 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS11395 PF02390 Putative methyltransferase RU84_RS11400 PF13417 Glutathione S-transferase, N-terminal domain RU84_RS11400 PF00043 Glutathione S-transferase, C-terminal domain RU84_RS11410 PF13488 Glycine zipper RU84_RS11410 PF00691 OmpA family RU84_RS11415 PF01979 Amidohydrolase family RU84_RS11420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RU84_RS11420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RU84_RS11430 PF01170 Putative RNA methylase family UPF0020 RU84_RS11430 PF02926 THUMP domain RU84_RS11430 PF10672 S-adenosylmethionine-dependent methyltransferase RU84_RS11445 PF10431 C-terminal, D2-small domain, of ClpB protein RU84_RS11445 PF02861 Clp amino terminal domain, pathogenicity island component RU84_RS11445 PF17871 AAA lid domain RU84_RS11445 PF07724 AAA domain (Cdc48 subfamily) RU84_RS11445 PF00004 ATPase family associated with various cellular activities (AAA) RU84_RS11465 PF02566 OsmC-like protein RU84_RS11470 PF13545 Crp-like helix-turn-helix domain RU84_RS11470 PF00027 Cyclic nucleotide-binding domain RU84_RS11475 PF00248 Aldo/keto reductase family RU84_RS11490 PF00709 Adenylosuccinate synthetase RU84_RS11495 PF13393 Histidyl-tRNA synthetase RU84_RS11505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RU84_RS11505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RU84_RS11510 PF01411 tRNA synthetases class II (A) RU84_RS11510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RU84_RS11510 PF02272 DHHA1 domain RU84_RS11515 PF00696 Amino acid kinase family RU84_RS11515 PF01842 ACT domain RU84_RS11515 PF13840 ACT domain RU84_RS11520 PF02599 Global regulator protein family RU84_RS11525 PF01351 Ribonuclease HII RU84_RS11535 PF01292 Prokaryotic cytochrome b561 RU84_RS11540 PF00962 Adenosine/AMP deaminase RU84_RS11545 PF00860 Permease family RU84_RS11555 PF00743 Flavin-binding monooxygenase-like RU84_RS11560 PF00106 short chain dehydrogenase RU84_RS11570 PF17954 Quercetinase C-terminal cupin domain RU84_RS11570 PF02678 Pirin RU84_RS11575 PF00440 Bacterial regulatory proteins, tetR family RU84_RS11575 PF17932 Tetracyclin repressor-like, C-terminal domain RU84_RS11585 PF00106 short chain dehydrogenase RU84_RS11595 PF04072 Leucine carboxyl methyltransferase RU84_RS11600 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RU84_RS11600 PF12833 Helix-turn-helix domain RU84_RS11605 PF00743 Flavin-binding monooxygenase-like RU84_RS11610 PF00106 short chain dehydrogenase RU84_RS11615 PF07859 alpha/beta hydrolase fold RU84_RS11620 PF05199 GMC oxidoreductase RU84_RS11625 PF03573 outer membrane porin, OprD family RU84_RS11630 PF07690 Major Facilitator Superfamily RU84_RS11635 PF00884 Sulfatase RU84_RS11640 PF03781 Sulfatase-modifying factor enzyme 1 RU84_RS11650 PF00355 Rieske [2Fe-2S] domain RU84_RS11655 PF00175 Oxidoreductase NAD-binding domain RU84_RS11655 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS11670 PF07690 Major Facilitator Superfamily RU84_RS11675 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS11680 PF00171 Aldehyde dehydrogenase family RU84_RS11690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS11690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS11690 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS11695 PF03573 outer membrane porin, OprD family RU84_RS11710 PF07519 Tannase and feruloyl esterase RU84_RS11715 PF07729 FCD domain RU84_RS11715 PF00392 Bacterial regulatory proteins, gntR family RU84_RS11720 PF00171 Aldehyde dehydrogenase family RU84_RS11725 PF00701 Dihydrodipicolinate synthetase family RU84_RS11730 PF13378 Enolase C-terminal domain-like RU84_RS11735 PF07690 Major Facilitator Superfamily RU84_RS11745 PF00892 EamA-like transporter family RU84_RS11750 PF12833 Helix-turn-helix domain RU84_RS11750 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RU84_RS11755 PF00171 Aldehyde dehydrogenase family RU84_RS11785 PF00324 Amino acid permease RU84_RS11790 PF04958 Arginine N-succinyltransferase beta subunit RU84_RS11795 PF00202 Aminotransferase class-III RU84_RS11805 PF00171 Aldehyde dehydrogenase family RU84_RS11815 PF00392 Bacterial regulatory proteins, gntR family RU84_RS11815 PF07729 FCD domain RU84_RS11825 PF00324 Amino acid permease RU84_RS11830 PF01266 FAD dependent oxidoreductase RU84_RS11835 PF00324 Amino acid permease RU84_RS11870 PF05593 RHS Repeat RU84_RS11870 PF03527 RHS protein RU84_RS11875 PF13296 Putative type VI secretion system Rhs element Vgr RU84_RS11875 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) RU84_RS11875 PF04717 Type VI secretion system, phage-baseplate injector RU84_RS11885 PF03180 NLPA lipoprotein RU84_RS11890 PF05987 Bacterial protein of unknown function (DUF898) RU84_RS11910 PF13742 OB-fold nucleic acid binding domain RU84_RS11910 PF02601 Exonuclease VII, large subunit RU84_RS11935 PF02384 N-6 DNA Methylase RU84_RS11940 PF04851 Type III restriction enzyme, res subunit RU84_RS11940 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RU84_RS11940 PF00271 Helicase conserved C-terminal domain RU84_RS11940 PF08463 EcoEI R protein C-terminal RU84_RS11970 PF13936 Helix-turn-helix domain RU84_RS11970 PF00665 Integrase core domain RU84_RS11985 PF07728 AAA domain (dynein-related subfamily) RU84_RS11985 PF12102 Domain of unknown function (DUF3578) RU84_RS12060 PF02463 RecF/RecN/SMC N terminal domain RU84_RS12065 PF13356 Arm DNA-binding domain RU84_RS12065 PF00589 Phage integrase family RU84_RS12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS12075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU84_RS12080 PF00764 Arginosuccinate synthase RU84_RS12085 PF01590 GAF domain RU84_RS12085 PF00360 Phytochrome region RU84_RS12085 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS12085 PF00563 EAL domain RU84_RS12090 PF01979 Amidohydrolase family RU84_RS12095 PF00929 Exonuclease RU84_RS12105 PF07715 TonB-dependent Receptor Plug Domain RU84_RS12105 PF00593 TonB dependent receptor RU84_RS12110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU84_RS12110 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS12115 PF00005 ABC transporter RU84_RS12115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RU84_RS12120 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS12120 PF12911 N-terminal TM domain of oligopeptide transport permease C RU84_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS12130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RU84_RS12135 PF01476 LysM domain RU84_RS12135 PF01464 Transglycosylase SLT domain RU84_RS12135 PF01464 Transglycosylase SLT domain RU84_RS12135 PF01476 LysM domain RU84_RS12140 PF00929 Exonuclease RU84_RS12150 PF09297 NADH pyrophosphatase zinc ribbon domain RU84_RS12150 PF00293 NUDIX domain RU84_RS12160 PF04972 BON domain RU84_RS12165 PF02021 Uncharacterised protein family UPF0102 RU84_RS12170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RU84_RS12180 PF03466 LysR substrate binding domain RU84_RS12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS12185 PF01810 LysE type translocator RU84_RS12195 PF13411 MerR HTH family regulatory protein RU84_RS12205 PF01494 FAD binding domain RU84_RS12210 PF01494 FAD binding domain RU84_RS12215 PF00557 Metallopeptidase family M24 RU84_RS12215 PF05195 Aminopeptidase P, N-terminal domain RU84_RS12255 PF00717 Peptidase S24-like RU84_RS12260 PF00817 impB/mucB/samB family RU84_RS12260 PF13438 Domain of unknown function (DUF4113) RU84_RS12260 PF11799 impB/mucB/samB family C-terminal domain RU84_RS12305 PF01551 Peptidase family M23 RU84_RS12305 PF08525 Opacity-associated protein A N-terminal motif RU84_RS12305 PF01476 LysM domain RU84_RS12320 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RU84_RS12445 PF13936 Helix-turn-helix domain RU84_RS12445 PF00665 Integrase core domain RU84_RS12530 PF01381 Helix-turn-helix RU84_RS12600 PF01812 5-formyltetrahydrofolate cyclo-ligase family RU84_RS12605 PF00004 ATPase family associated with various cellular activities (AAA) RU84_RS12605 PF05362 Lon protease (S16) C-terminal proteolytic domain RU84_RS12605 PF02190 ATP-dependent protease La (LON) substrate-binding domain RU84_RS12610 PF02590 Predicted SPOUT methyltransferase RU84_RS12615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RU84_RS12625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RU84_RS12625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RU84_RS12630 PF04060 Putative Fe-S cluster RU84_RS12635 PF00633 Helix-hairpin-helix motif RU84_RS12635 PF10576 Iron-sulfur binding domain of endonuclease III RU84_RS12635 PF00730 HhH-GPD superfamily base excision DNA repair protein RU84_RS12640 PF05191 Adenylate kinase, active site lid RU84_RS12655 PF00905 Penicillin binding protein transpeptidase domain RU84_RS12655 PF03717 Penicillin-binding Protein dimerisation domain RU84_RS12670 PF02492 CobW/HypB/UreG, nucleotide-binding domain RU84_RS12675 PF01730 UreF RU84_RS12680 PF05194 UreE urease accessory protein, C-terminal domain RU84_RS12680 PF02814 UreE urease accessory protein, N-terminal domain RU84_RS12685 PF00449 Urease alpha-subunit, N-terminal domain RU84_RS12685 PF01979 Amidohydrolase family RU84_RS12690 PF00699 Urease beta subunit RU84_RS12695 PF00547 Urease, gamma subunit RU84_RS12700 PF01774 UreD urease accessory protein RU84_RS12715 PF00463 Isocitrate lyase family RU84_RS12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS12720 PF03466 LysR substrate binding domain RU84_RS12725 PF00571 CBS domain RU84_RS12725 PF03471 Transporter associated domain RU84_RS12725 PF01595 Cyclin M transmembrane N-terminal domain RU84_RS12730 PF03600 Citrate transporter RU84_RS12745 PF00009 Elongation factor Tu GTP binding domain RU84_RS12750 PF01507 Phosphoadenosine phosphosulfate reductase family RU84_RS12755 PF14052 Capsule assembly protein Wzi RU84_RS12760 PF01336 OB-fold nucleic acid binding domain RU84_RS12760 PF00152 tRNA synthetases class II (D, K and N) RU84_RS12775 PF00301 Rubredoxin RU84_RS12780 PF18113 Rubredoxin binding C-terminal domain RU84_RS12780 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS12785 PF00561 alpha/beta hydrolase fold RU84_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS12790 PF03466 LysR substrate binding domain RU84_RS12800 PF13089 Polyphosphate kinase N-terminal domain RU84_RS12800 PF17941 Polyphosphate kinase C-terminal domain 1 RU84_RS12800 PF13090 Polyphosphate kinase C-terminal domain 2 RU84_RS12800 PF02503 Polyphosphate kinase middle domain RU84_RS12805 PF00912 Transglycosylase RU84_RS12810 PF01694 Rhomboid family RU84_RS12820 PF00005 ABC transporter RU84_RS12825 PF13472 GDSL-like Lipase/Acylhydrolase family RU84_RS12830 PF00484 Carbonic anhydrase RU84_RS12845 PF00593 TonB dependent receptor RU84_RS12845 PF07715 TonB-dependent Receptor Plug Domain RU84_RS12850 PF01521 Iron-sulphur cluster biosynthesis RU84_RS12850 PF01106 NifU-like domain RU84_RS12860 PF00884 Sulfatase RU84_RS12865 PF03781 Sulfatase-modifying factor enzyme 1 RU84_RS12880 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS12885 PF01384 Phosphate transporter family RU84_RS12890 PF02574 Homocysteine S-methyltransferase RU84_RS12890 PF00809 Pterin binding enzyme RU84_RS12890 PF02965 Vitamin B12 dependent methionine synthase, activation domain RU84_RS12890 PF02607 B12 binding domain RU84_RS12890 PF02310 B12 binding domain RU84_RS12895 PF02780 Transketolase, C-terminal domain RU84_RS12895 PF02779 Transketolase, pyrimidine binding domain RU84_RS12900 PF00456 Transketolase, thiamine diphosphate binding domain RU84_RS12905 PF07690 Major Facilitator Superfamily RU84_RS12915 PF03466 LysR substrate binding domain RU84_RS12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS12925 PF01263 Aldose 1-epimerase RU84_RS12930 PF07690 Major Facilitator Superfamily RU84_RS12940 PF04960 Glutaminase RU84_RS12945 PF01327 Polypeptide deformylase RU84_RS12950 PF07690 Major Facilitator Superfamily RU84_RS12960 PF00205 Thiamine pyrophosphate enzyme, central domain RU84_RS12960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU84_RS12960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU84_RS12965 PF00171 Aldehyde dehydrogenase family RU84_RS12970 PF01958 Domain of unknown function DUF108 RU84_RS12970 PF03447 Homoserine dehydrogenase, NAD binding domain RU84_RS12980 PF12697 Alpha/beta hydrolase family RU84_RS12990 PF07690 Major Facilitator Superfamily RU84_RS12995 PF14759 Reductase C-terminal RU84_RS12995 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS13000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU84_RS13010 PF00355 Rieske [2Fe-2S] domain RU84_RS13020 PF00355 Rieske [2Fe-2S] domain RU84_RS13025 PF01614 Bacterial transcriptional regulator RU84_RS13025 PF09339 IclR helix-turn-helix domain RU84_RS13040 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS13050 PF00535 Glycosyl transferase family 2 RU84_RS13055 PF14883 Hypothetical glycosyl hydrolase family 13 RU84_RS13055 PF01522 Polysaccharide deacetylase RU84_RS13060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RU84_RS13065 PF07152 YaeQ protein RU84_RS13070 PF00375 Sodium:dicarboxylate symporter family RU84_RS13075 PF07683 Cobalamin synthesis protein cobW C-terminal domain RU84_RS13075 PF02492 CobW/HypB/UreG, nucleotide-binding domain RU84_RS13085 PF03061 Thioesterase superfamily RU84_RS13095 PF02028 BCCT, betaine/carnitine/choline family transporter RU84_RS13100 PF02028 BCCT, betaine/carnitine/choline family transporter RU84_RS13105 PF13977 BetI-type transcriptional repressor, C-terminal RU84_RS13105 PF00440 Bacterial regulatory proteins, tetR family RU84_RS13110 PF00171 Aldehyde dehydrogenase family RU84_RS13115 PF05199 GMC oxidoreductase RU84_RS13115 PF00732 GMC oxidoreductase RU84_RS13120 PF06039 Malate:quinone oxidoreductase (Mqo) RU84_RS13130 PF02574 Homocysteine S-methyltransferase RU84_RS13135 PF13520 Amino acid permease RU84_RS13160 PF00701 Dihydrodipicolinate synthetase family RU84_RS13165 PF00083 Sugar (and other) transporter RU84_RS13300 PF02767 DNA polymerase III beta subunit, central domain RU84_RS13300 PF00712 DNA polymerase III beta subunit, N-terminal domain RU84_RS13300 PF02768 DNA polymerase III beta subunit, C-terminal domain RU84_RS13465 PF07007 Lysozyme inhibitor LprI RU84_RS13510 PF01695 IstB-like ATP binding protein RU84_RS13520 PF00145 C-5 cytosine-specific DNA methylase RU84_RS13565 PF01381 Helix-turn-helix RU84_RS13565 PF00717 Peptidase S24-like RU84_RS13600 PF00929 Exonuclease RU84_RS13665 PF07690 Major Facilitator Superfamily RU84_RS13670 PF13533 Biotin-lipoyl like RU84_RS13675 PF03061 Thioesterase superfamily RU84_RS13680 PF00490 Delta-aminolevulinic acid dehydratase RU84_RS13685 PF01266 FAD dependent oxidoreductase RU84_RS13690 PF08338 Domain of unknown function (DUF1731) RU84_RS13690 PF01370 NAD dependent epimerase/dehydratase family RU84_RS13710 PF12320 Type 5 capsule protein repressor C-terminal domain RU84_RS13710 PF00149 Calcineurin-like phosphoesterase RU84_RS13720 PF01168 Alanine racemase, N-terminal domain RU84_RS13725 PF00437 Type II/IV secretion system protein RU84_RS13730 PF00437 Type II/IV secretion system protein RU84_RS13735 PF01475 Ferric uptake regulator family RU84_RS13740 PF04355 SmpA / OmlA family RU84_RS13745 PF03658 RnfH family Ubiquitin RU84_RS13755 PF01814 Hemerythrin HHE cation binding domain RU84_RS13760 PF13230 Glutamine amidotransferases class-II RU84_RS13770 PF00696 Amino acid kinase family RU84_RS13775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RU84_RS13775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RU84_RS13775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RU84_RS13775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RU84_RS13780 PF00692 dUTPase RU84_RS13785 PF13361 UvrD-like helicase C-terminal domain RU84_RS13785 PF00580 UvrD/REP helicase N-terminal domain RU84_RS13790 PF00691 OmpA family RU84_RS13790 PF13488 Glycine zipper RU84_RS13795 PF01553 Acyltransferase RU84_RS13805 PF03775 Septum formation inhibitor MinC, C-terminal domain RU84_RS13810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RU84_RS13815 PF03776 Septum formation topological specificity factor MinE RU84_RS13830 PF01810 LysE type translocator RU84_RS13835 PF09397 Ftsk gamma domain RU84_RS13835 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RU84_RS13835 PF01580 FtsK/SpoIIIE family RU84_RS13835 PF17854 FtsK alpha domain RU84_RS13840 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS13845 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RU84_RS13850 PF04376 Arginine-tRNA-protein transferase, N terminus RU84_RS13850 PF04377 Arginine-tRNA-protein transferase, C terminus RU84_RS13855 PF00583 Acetyltransferase (GNAT) family RU84_RS13870 PF00009 Elongation factor Tu GTP binding domain RU84_RS13870 PF03143 Elongation factor Tu C-terminal domain RU84_RS13870 PF03144 Elongation factor Tu domain 2 RU84_RS13875 PF03144 Elongation factor Tu domain 2 RU84_RS13875 PF00009 Elongation factor Tu GTP binding domain RU84_RS13875 PF14492 Elongation Factor G, domain II RU84_RS13875 PF00679 Elongation factor G C-terminus RU84_RS13875 PF03764 Elongation factor G, domain IV RU84_RS13880 PF00177 Ribosomal protein S7p/S5e RU84_RS13885 PF00164 Ribosomal protein S12/S23 RU84_RS13895 PF02801 Beta-ketoacyl synthase, C-terminal domain RU84_RS13895 PF00109 Beta-ketoacyl synthase, N-terminal domain RU84_RS13900 PF03653 Uncharacterised protein family (UPF0093) RU84_RS13905 PF05726 Pirin C-terminal cupin domain RU84_RS13905 PF02678 Pirin RU84_RS13915 PF00795 Carbon-nitrogen hydrolase RU84_RS13915 PF02540 NAD synthase RU84_RS13930 PF00111 2Fe-2S iron-sulfur cluster binding domain RU84_RS13930 PF00970 Oxidoreductase FAD-binding domain RU84_RS13930 PF00175 Oxidoreductase NAD-binding domain RU84_RS13935 PF00171 Aldehyde dehydrogenase family RU84_RS13940 PF00355 Rieske [2Fe-2S] domain RU84_RS13940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RU84_RS13945 PF07859 alpha/beta hydrolase fold RU84_RS13950 PF02028 BCCT, betaine/carnitine/choline family transporter RU84_RS13955 PF00180 Isocitrate/isopropylmalate dehydrogenase RU84_RS13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS13960 PF03466 LysR substrate binding domain RU84_RS13975 PF00037 4Fe-4S binding domain RU84_RS13980 PF01467 Cytidylyltransferase-like RU84_RS13985 PF00589 Phage integrase family RU84_RS13985 PF13356 Arm DNA-binding domain RU84_RS14220 PF00772 DnaB-like helicase N terminal domain RU84_RS14220 PF03796 DnaB-like helicase C terminal domain RU84_RS14240 PF01381 Helix-turn-helix RU84_RS14250 PF12161 HsdM N-terminal domain RU84_RS14250 PF02384 N-6 DNA Methylase RU84_RS14255 PF13936 Helix-turn-helix domain RU84_RS14255 PF00665 Integrase core domain RU84_RS14320 PF01668 SmpB protein RU84_RS14325 PF03358 NADPH-dependent FMN reductase RU84_RS14330 PF02578 Multi-copper polyphenol oxidoreductase laccase RU84_RS14335 PF00849 RNA pseudouridylate synthase RU84_RS14335 PF01479 S4 domain RU84_RS14340 PF13525 Outer membrane lipoprotein RU84_RS14345 PF08275 DNA primase catalytic core, N-terminal domain RU84_RS14345 PF10410 DnaB-helicase binding domain of primase RU84_RS14345 PF01807 CHC2 zinc finger RU84_RS14345 PF08278 DNA primase DnaG DnaB-binding RU84_RS14350 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RU84_RS14350 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RU84_RS14350 PF01488 Shikimate / quinate 5-dehydrogenase RU84_RS14360 PF03550 Outer membrane lipoprotein LolB RU84_RS14365 PF08544 GHMP kinases C terminal RU84_RS14365 PF00288 GHMP kinases N terminal domain RU84_RS14390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RU84_RS14390 PF14572 Phosphoribosyl synthetase-associated domain RU84_RS14395 PF01386 Ribosomal L25p family RU84_RS14400 PF01195 Peptidyl-tRNA hydrolase RU84_RS14405 PF02261 Aspartate decarboxylase RU84_RS14420 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RU84_RS14430 PF08543 Phosphomethylpyrimidine kinase RU84_RS14430 PF02581 Thiamine monophosphate synthase RU84_RS14430 PF03070 TENA/THI-4/PQQC family RU84_RS14435 PF04972 BON domain RU84_RS14435 PF01476 LysM domain RU84_RS14440 PF00550 Phosphopantetheine attachment site RU84_RS14450 PF00698 Acyl transferase domain RU84_RS14455 PF01783 Ribosomal L32p protein family RU84_RS14460 PF02620 Large ribosomal RNA subunit accumulation protein YceD RU84_RS14465 PF04315 Elongation factor P hydroxylase RU84_RS14470 PF01300 Telomere recombination RU84_RS14475 PF02616 Segregation and condensation protein ScpA RU84_RS14480 PF04079 Segregation and condensation complex subunit ScpB RU84_RS14485 PF01479 S4 domain RU84_RS14485 PF00849 RNA pseudouridylate synthase RU84_RS14500 PF00155 Aminotransferase class I and II RU84_RS14505 PF04055 Radical SAM superfamily RU84_RS14505 PF06968 Biotin and Thiamin Synthesis associated domain RU84_RS14505 PF00202 Aminotransferase class-III RU84_RS14510 PF12697 Alpha/beta hydrolase family RU84_RS14510 PF08241 Methyltransferase domain RU84_RS14515 PF02358 Trehalose-phosphatase RU84_RS14520 PF00982 Glycosyltransferase family 20 RU84_RS14525 PF07690 Major Facilitator Superfamily RU84_RS14530 PF00210 Ferritin-like domain RU84_RS14535 PF00533 BRCA1 C Terminus (BRCT) domain RU84_RS14535 PF01653 NAD-dependent DNA ligase adenylation domain RU84_RS14535 PF03120 NAD-dependent DNA ligase OB-fold domain RU84_RS14535 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RU84_RS14535 PF12826 Helix-hairpin-helix motif RU84_RS14545 PF02463 RecF/RecN/SMC N terminal domain RU84_RS14545 PF06470 SMC proteins Flexible Hinge Domain RU84_RS14555 PF01925 Sulfite exporter TauE/SafE RU84_RS14565 PF03309 Type III pantothenate kinase RU84_RS14570 PF02978 Signal peptide binding domain RU84_RS14570 PF02881 SRP54-type protein, helical bundle domain RU84_RS14570 PF00448 SRP54-type protein, GTPase domain RU84_RS14580 PF01207 Dihydrouridine synthase (Dus) RU84_RS14610 PF00692 dUTPase RU84_RS14625 PF01048 Phosphorylase superfamily RU84_RS14635 PF10609 NUBPL iron-transfer P-loop NTPase RU84_RS14645 PF09334 tRNA synthetases class I (M) RU84_RS14645 PF01588 Putative tRNA binding domain RU84_RS14670 PF13533 Biotin-lipoyl like RU84_RS14675 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS14690 PF05552 Conserved TM helix RU84_RS14705 PF00970 Oxidoreductase FAD-binding domain RU84_RS14705 PF00175 Oxidoreductase NAD-binding domain RU84_RS14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS14710 PF03466 LysR substrate binding domain RU84_RS14715 PF00313 'Cold-shock' DNA-binding domain RU84_RS14725 PF00361 Proton-conducting membrane transporter RU84_RS14730 PF00361 Proton-conducting membrane transporter RU84_RS14735 PF00361 Proton-conducting membrane transporter RU84_RS14735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RU84_RS14740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RU84_RS14745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RU84_RS14750 PF12838 4Fe-4S dicluster domain RU84_RS14755 PF00146 NADH dehydrogenase RU84_RS14760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RU84_RS14760 PF00384 Molybdopterin oxidoreductase RU84_RS14760 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RU84_RS14765 PF10531 SLBB domain RU84_RS14765 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RU84_RS14765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RU84_RS14775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RU84_RS14775 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RU84_RS14780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RU84_RS14785 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RU84_RS14790 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS14790 PF17158 Membrane-associated sensor, integral membrane domain RU84_RS14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS14800 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS14800 PF00672 HAMP domain RU84_RS14805 PF00072 Response regulator receiver domain RU84_RS14805 PF00486 Transcriptional regulatory protein, C terminal RU84_RS14815 PF00317 Ribonucleotide reductase, all-alpha domain RU84_RS14815 PF02867 Ribonucleotide reductase, barrel domain RU84_RS14815 PF03477 ATP cone domain RU84_RS14825 PF00268 Ribonucleotide reductase, small chain RU84_RS14840 PF17074 Darcynin, domain of unknown function RU84_RS14860 PF01613 Flavin reductase like domain RU84_RS14865 PF01717 Cobalamin-independent synthase, Catalytic domain RU84_RS14865 PF08267 Cobalamin-independent synthase, N-terminal domain RU84_RS14880 PF12833 Helix-turn-helix domain RU84_RS14880 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RU84_RS14885 PF07687 Peptidase dimerisation domain RU84_RS14885 PF01546 Peptidase family M20/M25/M40 RU84_RS14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS14895 PF03466 LysR substrate binding domain RU84_RS14900 PF07690 Major Facilitator Superfamily RU84_RS14910 PF03466 LysR substrate binding domain RU84_RS14910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS14915 PF14537 Cytochrome c3 RU84_RS14915 PF00890 FAD binding domain RU84_RS14930 PF17932 Tetracyclin repressor-like, C-terminal domain RU84_RS14930 PF00440 Bacterial regulatory proteins, tetR family RU84_RS14935 PF02515 CoA-transferase family III RU84_RS14940 PF07690 Major Facilitator Superfamily RU84_RS14945 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS14945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS14945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS14950 PF03466 LysR substrate binding domain RU84_RS14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS14955 PF08240 Alcohol dehydrogenase GroES-like domain RU84_RS14955 PF00107 Zinc-binding dehydrogenase RU84_RS14960 PF00962 Adenosine/AMP deaminase RU84_RS14985 PF02445 Quinolinate synthetase A protein RU84_RS14990 PF01960 ArgJ family RU84_RS14995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RU84_RS14995 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RU84_RS15000 PF00893 Small Multidrug Resistance protein RU84_RS15015 PF07731 Multicopper oxidase RU84_RS15015 PF07732 Multicopper oxidase RU84_RS15015 PF00394 Multicopper oxidase RU84_RS15030 PF00834 Ribulose-phosphate 3 epimerase family RU84_RS15040 PF00756 Putative esterase RU84_RS15050 PF04445 Putative SAM-dependent methyltransferase RU84_RS15055 PF00814 Glycoprotease family RU84_RS15060 PF00132 Bacterial transferase hexapeptide (six repeats) RU84_RS15065 PF00293 NUDIX domain RU84_RS15110 PF00425 chorismate binding enzyme RU84_RS15110 PF04715 Anthranilate synthase component I, N terminal region RU84_RS15115 PF00155 Aminotransferase class I and II RU84_RS15120 PF00815 Histidinol dehydrogenase RU84_RS15125 PF01634 ATP phosphoribosyltransferase RU84_RS15130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RU84_RS15135 PF01722 BolA-like protein RU84_RS15140 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RU84_RS15145 PF00309 Sigma-54 factor, Activator interacting domain (AID) RU84_RS15145 PF04552 Sigma-54, DNA binding domain RU84_RS15145 PF04963 Sigma-54 factor, core binding domain RU84_RS15190 PF00795 Carbon-nitrogen hydrolase RU84_RS15200 PF01047 MarR family RU84_RS15205 PF02566 OsmC-like protein RU84_RS15210 PF00437 Type II/IV secretion system protein RU84_RS15230 PF01612 3'-5' exonuclease RU84_RS15230 PF00476 DNA polymerase family A RU84_RS15230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RU84_RS15230 PF01367 5'-3' exonuclease, C-terminal SAM fold RU84_RS15235 PF02325 YGGT family RU84_RS15240 PF03807 NADP oxidoreductase coenzyme F420-dependent RU84_RS15240 PF14748 Pyrroline-5-carboxylate reductase dimerisation RU84_RS15245 PF09179 TilS substrate binding domain RU84_RS15245 PF11734 TilS substrate C-terminal domain RU84_RS15245 PF01171 PP-loop family RU84_RS15250 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RU84_RS15255 PF02541 Ppx/GppA phosphatase family RU84_RS15260 PF00085 Thioredoxin RU84_RS15265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RU84_RS15265 PF07498 Rho termination factor, N-terminal domain RU84_RS15265 PF07497 Rho termination factor, RNA-binding domain RU84_RS15275 PF00216 Bacterial DNA-binding protein RU84_RS15280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RU84_RS15280 PF01588 Putative tRNA binding domain RU84_RS15280 PF03147 Ferredoxin-fold anticodon binding domain RU84_RS15280 PF03484 tRNA synthetase B5 domain RU84_RS15280 PF03483 B3/4 domain RU84_RS15285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RU84_RS15285 PF01409 tRNA synthetases class II core domain (F) RU84_RS15305 PF00453 Ribosomal protein L20 RU84_RS15310 PF01632 Ribosomal protein L35 RU84_RS15315 PF07690 Major Facilitator Superfamily RU84_RS15320 PF09335 SNARE associated Golgi protein RU84_RS15325 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS15325 PF00043 Glutathione S-transferase, C-terminal domain RU84_RS15330 PF00707 Translation initiation factor IF-3, C-terminal domain RU84_RS15330 PF05198 Translation initiation factor IF-3, N-terminal domain RU84_RS15335 PF02824 TGS domain RU84_RS15335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RU84_RS15335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RU84_RS15335 PF03129 Anticodon binding domain RU84_RS15340 PF00501 AMP-binding enzyme RU84_RS15340 PF13193 AMP-binding enzyme C-terminal domain RU84_RS15345 PF04751 Protein of unknown function (DUF615) RU84_RS15350 PF00381 PTS HPr component phosphorylation site RU84_RS15355 PF03668 P-loop ATPase protein family RU84_RS15360 PF02569 Pantoate-beta-alanine ligase RU84_RS15365 PF02548 Ketopantoate hydroxymethyltransferase RU84_RS15370 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RU84_RS15375 PF12627 Probable RNA and SrmB- binding site of polymerase A RU84_RS15375 PF12626 Polymerase A arginine-rich C-terminus RU84_RS15375 PF01743 Poly A polymerase head domain RU84_RS15385 PF03819 MazG nucleotide pyrophosphohydrolase domain RU84_RS15395 PF02824 TGS domain RU84_RS15395 PF13291 ACT domain RU84_RS15395 PF04607 Region found in RelA / SpoT proteins RU84_RS15400 PF05958 tRNA (Uracil-5-)-methyltransferase RU84_RS15410 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS15415 PF01627 Hpt domain RU84_RS15415 PF00672 HAMP domain RU84_RS15415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS15415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RU84_RS15415 PF00072 Response regulator receiver domain RU84_RS15415 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS15420 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS15425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RU84_RS15425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RU84_RS15430 PF01261 Xylose isomerase-like TIM barrel RU84_RS15440 PF00106 short chain dehydrogenase RU84_RS15445 PF02233 NAD(P) transhydrogenase beta subunit RU84_RS15450 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RU84_RS15455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RU84_RS15455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RU84_RS15460 PF00892 EamA-like transporter family RU84_RS15470 PF07690 Major Facilitator Superfamily RU84_RS15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS15505 PF03358 NADPH-dependent FMN reductase RU84_RS15510 PF01758 Sodium Bile acid symporter family RU84_RS15520 PF01022 Bacterial regulatory protein, arsR family RU84_RS15525 PF03960 ArsC family RU84_RS15530 PF13411 MerR HTH family regulatory protein RU84_RS15545 PF02421 Ferrous iron transport protein B RU84_RS15545 PF07670 Nucleoside recognition RU84_RS15545 PF07664 Ferrous iron transport protein B C terminus RU84_RS15555 PF00873 AcrB/AcrD/AcrF family RU84_RS15560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS15580 PF07731 Multicopper oxidase RU84_RS15580 PF00394 Multicopper oxidase RU84_RS15580 PF07732 Multicopper oxidase RU84_RS15590 PF00072 Response regulator receiver domain RU84_RS15590 PF00486 Transcriptional regulatory protein, C terminal RU84_RS15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS15595 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS15595 PF00672 HAMP domain RU84_RS15600 PF04945 YHS domain RU84_RS15665 PF00589 Phage integrase family RU84_RS15670 PF01207 Dihydrouridine synthase (Dus) RU84_RS15680 PF03466 LysR substrate binding domain RU84_RS15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS15685 PF13936 Helix-turn-helix domain RU84_RS15685 PF00665 Integrase core domain RU84_RS15690 PF00899 ThiF family RU84_RS15695 PF00694 Aconitase C-terminal domain RU84_RS15695 PF00330 Aconitase family (aconitate hydratase) RU84_RS15700 PF01026 TatD related DNase RU84_RS15715 PF16658 Class II release factor RF3, C-terminal domain RU84_RS15715 PF00009 Elongation factor Tu GTP binding domain RU84_RS15715 PF03144 Elongation factor Tu domain 2 RU84_RS15735 PF00563 EAL domain RU84_RS15735 PF00990 Diguanylate cyclase, GGDEF domain RU84_RS15735 PF03707 Bacterial signalling protein N terminal repeat RU84_RS15740 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RU84_RS15740 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RU84_RS15745 PF10369 Small subunit of acetolactate synthase RU84_RS15750 PF00205 Thiamine pyrophosphate enzyme, central domain RU84_RS15750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU84_RS15750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU84_RS15760 PF13603 Leucyl-tRNA synthetase, Domain 2 RU84_RS15760 PF09334 tRNA synthetases class I (M) RU84_RS15760 PF08264 Anticodon-binding domain of tRNA RU84_RS15760 PF00133 tRNA synthetases class I (I, L, M and V) RU84_RS15775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS15780 PF12704 MacB-like periplasmic core domain RU84_RS15780 PF02687 FtsX-like permease family RU84_RS15780 PF00005 ABC transporter RU84_RS15785 PF02321 Outer membrane efflux protein RU84_RS15800 PF00929 Exonuclease RU84_RS15805 PF03193 RsgA GTPase RU84_RS15815 PF00462 Glutaredoxin RU84_RS15820 PF02556 Preprotein translocase subunit SecB RU84_RS15830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RU84_RS15830 PF01926 50S ribosome-binding GTPase RU84_RS15835 PF13360 PQQ-like domain RU84_RS15845 PF03129 Anticodon binding domain RU84_RS15845 PF13393 Histidyl-tRNA synthetase RU84_RS15850 PF04551 GcpE protein RU84_RS15855 PF13464 Domain of unknown function (DUF4115) RU84_RS15865 PF04055 Radical SAM superfamily RU84_RS15870 PF00334 Nucleoside diphosphate kinase RU84_RS15875 PF04384 Iron-sulphur cluster assembly RU84_RS15880 PF01569 PAP2 superfamily RU84_RS15885 PF00534 Glycosyl transferases group 1 RU84_RS15885 PF13439 Glycosyltransferase Family 4 RU84_RS15890 PF11818 C-terminal domain of tail specific protease (DUF3340) RU84_RS15890 PF03572 Peptidase family S41 RU84_RS15890 PF17804 Tail specific protease N-terminal domain RU84_RS15890 PF00595 PDZ domain RU84_RS15895 PF00933 Glycosyl hydrolase family 3 N terminal domain RU84_RS15905 PF12697 Alpha/beta hydrolase family RU84_RS15910 PF00171 Aldehyde dehydrogenase family RU84_RS15915 PF00171 Aldehyde dehydrogenase family RU84_RS15920 PF01202 Shikimate kinase RU84_RS15925 PF02447 GntP family permease RU84_RS15930 PF01081 KDPG and KHG aldolase RU84_RS15935 PF00920 Dehydratase family RU84_RS15940 PF00871 Acetokinase family RU84_RS15945 PF07085 DRTGG domain RU84_RS15945 PF01515 Phosphate acetyl/butaryl transferase RU84_RS15950 PF05683 Fumarase C-terminus RU84_RS15950 PF05681 Fumarate hydratase (Fumerase) RU84_RS15965 PF06689 ClpX C4-type zinc finger RU84_RS15965 PF10431 C-terminal, D2-small domain, of ClpB protein RU84_RS15965 PF07724 AAA domain (Cdc48 subfamily) RU84_RS15970 PF00574 Clp protease RU84_RS15975 PF05697 Bacterial trigger factor protein (TF) RU84_RS15975 PF05698 Bacterial trigger factor protein (TF) C-terminus RU84_RS15975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RU84_RS15980 PF00593 TonB dependent receptor RU84_RS15980 PF07715 TonB-dependent Receptor Plug Domain RU84_RS15985 PF18331 PKHD-type hydroxylase C-terminal domain RU84_RS15985 PF13640 2OG-Fe(II) oxygenase superfamily RU84_RS15990 PF08502 LeuA allosteric (dimerisation) domain RU84_RS15990 PF00682 HMGL-like RU84_RS15995 PF00561 alpha/beta hydrolase fold RU84_RS16000 PF00561 alpha/beta hydrolase fold RU84_RS16000 PF07021 Methionine biosynthesis protein MetW RU84_RS16010 PF01725 Ham1 family RU84_RS16020 PF02416 mttA/Hcf106 family RU84_RS16025 PF02416 mttA/Hcf106 family RU84_RS16030 PF00902 Sec-independent protein translocase protein (TatC) RU84_RS16050 PF01790 Prolipoprotein diacylglyceryl transferase RU84_RS16065 PF00303 Thymidylate synthase RU84_RS16070 PF00186 Dihydrofolate reductase RU84_RS16080 PF01625 Peptide methionine sulfoxide reductase RU84_RS16090 PF01618 MotA/TolQ/ExbB proton channel family RU84_RS16100 PF01842 ACT domain RU84_RS16100 PF00551 Formyl transferase RU84_RS16110 PF00171 Aldehyde dehydrogenase family RU84_RS16115 PF00830 Ribosomal L28 family RU84_RS16120 PF00471 Ribosomal protein L33 RU84_RS16125 PF00999 Sodium/hydrogen exchanger family RU84_RS16125 PF02254 TrkA-N domain RU84_RS16145 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RU84_RS16150 PF13361 UvrD-like helicase C-terminal domain RU84_RS16150 PF00580 UvrD/REP helicase N-terminal domain RU84_RS16165 PF01396 Topoisomerase DNA binding C4 zinc finger RU84_RS16165 PF01751 Toprim domain RU84_RS16165 PF01131 DNA topoisomerase RU84_RS16165 PF08272 Topoisomerase I zinc-ribbon-like RU84_RS16175 PF01638 HxlR-like helix-turn-helix RU84_RS16180 PF08240 Alcohol dehydrogenase GroES-like domain RU84_RS16180 PF00107 Zinc-binding dehydrogenase RU84_RS16185 PF04102 SlyX RU84_RS16190 PF12848 ABC transporter RU84_RS16190 PF16326 ABC transporter C-terminal domain RU84_RS16190 PF00005 ABC transporter RU84_RS16195 PF01810 LysE type translocator RU84_RS16200 PF03279 Bacterial lipid A biosynthesis acyltransferase RU84_RS16210 PF00375 Sodium:dicarboxylate symporter family RU84_RS16220 PF01118 Semialdehyde dehydrogenase, NAD binding domain RU84_RS16220 PF02774 Semialdehyde dehydrogenase, dimerisation domain RU84_RS16235 PF17763 Glutaminase/Asparaginase C-terminal domain RU84_RS16235 PF00710 Asparaginase, N-terminal RU84_RS16240 PF01416 tRNA pseudouridine synthase RU84_RS16250 PF01176 Translation initiation factor 1A / IF-1 RU84_RS16265 PF00180 Isocitrate/isopropylmalate dehydrogenase RU84_RS16275 PF00694 Aconitase C-terminal domain RU84_RS16280 PF00330 Aconitase family (aconitate hydratase) RU84_RS16290 PF03466 LysR substrate binding domain RU84_RS16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS16300 PF00293 NUDIX domain RU84_RS16305 PF01590 GAF domain RU84_RS16305 PF00391 PEP-utilising enzyme, mobile domain RU84_RS16305 PF02896 PEP-utilising enzyme, TIM barrel domain RU84_RS16305 PF05524 PEP-utilising enzyme, N-terminal RU84_RS16310 PF00141 Peroxidase RU84_RS16315 PF12706 Beta-lactamase superfamily domain RU84_RS16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS16320 PF03466 LysR substrate binding domain RU84_RS16330 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS16335 PF08279 HTH domain RU84_RS16335 PF13280 WYL domain RU84_RS16340 PF13419 Haloacid dehalogenase-like hydrolase RU84_RS16345 PF01479 S4 domain RU84_RS16345 PF00849 RNA pseudouridylate synthase RU84_RS16350 PF12111 Polyribonucleotide phosphorylase C terminal RU84_RS16350 PF10150 Ribonuclease E/G family RU84_RS16350 PF00575 S1 RNA binding domain RU84_RS16355 PF00501 AMP-binding enzyme RU84_RS16355 PF13193 AMP-binding enzyme C-terminal domain RU84_RS16370 PF03466 LysR substrate binding domain RU84_RS16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS16380 PF04055 Radical SAM superfamily RU84_RS16380 PF06969 HemN C-terminal domain RU84_RS16390 PF01554 MatE RU84_RS16395 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS16395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS16395 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS16400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS16400 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS16405 PF03109 ABC1 family RU84_RS16410 PF01197 Ribosomal protein L31 RU84_RS16470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RU84_RS16480 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU84_RS16480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RU84_RS16480 PF13247 4Fe-4S dicluster domain RU84_RS16490 PF03884 DNA gyrase inhibitor YacG RU84_RS16495 PF00753 Metallo-beta-lactamase superfamily RU84_RS16500 PF00762 Ferrochelatase RU84_RS16510 PF01177 Asp/Glu/Hydantoin racemase RU84_RS16530 PF01206 Sulfurtransferase TusA RU84_RS16535 PF00571 CBS domain RU84_RS16535 PF03471 Transporter associated domain RU84_RS16540 PF00795 Carbon-nitrogen hydrolase RU84_RS16545 PF01588 Putative tRNA binding domain RU84_RS16555 PF08334 Type II secretion system (T2SS), protein G RU84_RS16555 PF07963 Prokaryotic N-terminal methylation motif RU84_RS16560 PF00482 Type II secretion system (T2SS), protein F RU84_RS16565 PF17764 3′ DNA-binding domain (3′BD) RU84_RS16565 PF18074 Primosomal protein N C-terminal domain RU84_RS16565 PF00270 DEAD/DEAH box helicase RU84_RS16565 PF00271 Helicase conserved C-terminal domain RU84_RS16565 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RU84_RS16570 PF02254 TrkA-N domain RU84_RS16570 PF00999 Sodium/hydrogen exchanger family RU84_RS16575 PF01430 Hsp33 protein RU84_RS16585 PF01556 DnaJ C terminal domain RU84_RS16585 PF00226 DnaJ domain RU84_RS16595 PF01544 CorA-like Mg2+ transporter protein RU84_RS16600 PF00013 KH domain RU84_RS16600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RU84_RS16600 PF01138 3' exoribonuclease family, domain 1 RU84_RS16600 PF03725 3' exoribonuclease family, domain 2 RU84_RS16600 PF00575 S1 RNA binding domain RU84_RS16605 PF00312 Ribosomal protein S15 RU84_RS16610 PF00144 Beta-lactamase RU84_RS16615 PF13538 UvrD-like helicase C-terminal domain RU84_RS16620 PF00580 UvrD/REP helicase N-terminal domain RU84_RS16620 PF12705 PD-(D/E)XK nuclease superfamily RU84_RS16620 PF13361 UvrD-like helicase C-terminal domain RU84_RS16625 PF17946 RecC C-terminal domain RU84_RS16635 PF03976 Polyphosphate kinase 2 (PPK2) RU84_RS16645 PF01209 ubiE/COQ5 methyltransferase family RU84_RS16655 PF03109 ABC1 family RU84_RS16660 PF01494 FAD binding domain RU84_RS16665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU84_RS16670 PF01502 Phosphoribosyl-AMP cyclohydrolase RU84_RS16685 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RU84_RS16685 PF00361 Proton-conducting membrane transporter RU84_RS16685 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RU84_RS16685 PF13244 Domain of unknown function (DUF4040) RU84_RS16690 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RU84_RS16695 PF00361 Proton-conducting membrane transporter RU84_RS16700 PF01899 Na+/H+ ion antiporter subunit RU84_RS16705 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RU84_RS16710 PF03334 Na+/H+ antiporter subunit RU84_RS16715 PF02033 Ribosome-binding factor A RU84_RS16720 PF04760 Translation initiation factor IF-2, N-terminal region RU84_RS16720 PF08364 Bacterial translation initiation factor IF-2 associated region RU84_RS16720 PF11987 Translation-initiation factor 2 RU84_RS16720 PF00009 Elongation factor Tu GTP binding domain RU84_RS16725 PF08529 NusA N-terminal domain RU84_RS16725 PF00575 S1 RNA binding domain RU84_RS16725 PF13184 NusA-like KH domain RU84_RS16730 PF17384 RimP C-terminal SH3 domain RU84_RS16730 PF02576 RimP N-terminal domain RU84_RS16750 PF03840 Preprotein translocase SecG subunit RU84_RS16755 PF00121 Triosephosphate isomerase RU84_RS16760 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RU84_RS16760 PF00437 Type II/IV secretion system protein RU84_RS16765 PF00482 Type II secretion system (T2SS), protein F RU84_RS16770 PF01478 Type IV leader peptidase family RU84_RS16770 PF06750 Bacterial Peptidase A24 N-terminal domain RU84_RS16775 PF01121 Dephospho-CoA kinase RU84_RS16785 PF08032 RNA 2'-O ribose methyltransferase substrate binding RU84_RS16785 PF00588 SpoU rRNA Methylase family RU84_RS16790 PF06865 Pyrimidine/purine nucleoside phosphorylase RU84_RS16800 PF02463 RecF/RecN/SMC N terminal domain RU84_RS16805 PF02622 Uncharacterized ACR, COG1678 RU84_RS16810 PF03652 Holliday junction resolvase RU84_RS16815 PF13533 Biotin-lipoyl like RU84_RS16840 PF02805 Metal binding domain of Ada RU84_RS16840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RU84_RS16840 PF12833 Helix-turn-helix domain RU84_RS16840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RU84_RS16845 PF01066 CDP-alcohol phosphatidyltransferase RU84_RS16855 PF08459 UvrC Helix-hairpin-helix N-terminal RU84_RS16855 PF02151 UvrB/uvrC motif RU84_RS16855 PF01541 GIY-YIG catalytic domain RU84_RS16870 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS16870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RU84_RS16870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RU84_RS16875 PF02803 Thiolase, C-terminal domain RU84_RS16875 PF00108 Thiolase, N-terminal domain RU84_RS16890 PF00376 MerR family regulatory protein RU84_RS16890 PF09278 MerR, DNA binding RU84_RS16900 PF01323 DSBA-like thioredoxin domain RU84_RS16915 PF00183 Hsp90 protein RU84_RS16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS16930 PF03553 Na+/H+ antiporter family RU84_RS16930 PF13726 Na+-H+ antiporter family RU84_RS16955 PF04983 RNA polymerase Rpb1, domain 3 RU84_RS16955 PF04998 RNA polymerase Rpb1, domain 5 RU84_RS16955 PF05000 RNA polymerase Rpb1, domain 4 RU84_RS16955 PF04997 RNA polymerase Rpb1, domain 1 RU84_RS16955 PF00623 RNA polymerase Rpb1, domain 2 RU84_RS16960 PF10385 RNA polymerase beta subunit external 1 domain RU84_RS16960 PF04565 RNA polymerase Rpb2, domain 3 RU84_RS16960 PF04561 RNA polymerase Rpb2, domain 2 RU84_RS16960 PF04563 RNA polymerase beta subunit RU84_RS16960 PF04560 RNA polymerase Rpb2, domain 7 RU84_RS16960 PF00562 RNA polymerase Rpb2, domain 6 RU84_RS16965 PF00542 Ribosomal protein L7/L12 C-terminal domain RU84_RS16965 PF16320 Ribosomal protein L7/L12 dimerisation domain RU84_RS16970 PF00466 Ribosomal protein L10 RU84_RS16975 PF00687 Ribosomal protein L1p/L10e family RU84_RS16980 PF03946 Ribosomal protein L11, N-terminal domain RU84_RS16980 PF00298 Ribosomal protein L11, RNA binding domain RU84_RS16985 PF02357 Transcription termination factor nusG RU84_RS16985 PF00467 KOW motif RU84_RS16990 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RU84_RS17000 PF03143 Elongation factor Tu C-terminal domain RU84_RS17000 PF00009 Elongation factor Tu GTP binding domain RU84_RS17000 PF03144 Elongation factor Tu domain 2 RU84_RS17025 PF04715 Anthranilate synthase component I, N terminal region RU84_RS17025 PF00425 chorismate binding enzyme RU84_RS17030 PF13419 Haloacid dehalogenase-like hydrolase RU84_RS17035 PF12401 Protein of unknown function (DUF2662) RU84_RS17035 PF00498 FHA domain RU84_RS17040 PF03958 Bacterial type II/III secretion system short domain RU84_RS17040 PF00263 Bacterial type II and III secretion system protein RU84_RS17055 PF00816 H-NS histone family RU84_RS17080 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RU84_RS17080 PF03900 Porphobilinogen deaminase, C-terminal domain RU84_RS17085 PF00072 Response regulator receiver domain RU84_RS17085 PF04397 LytTr DNA-binding domain RU84_RS17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS17090 PF07694 5TMR of 5TMR-LYT RU84_RS17090 PF06580 Histidine kinase RU84_RS17095 PF14698 Argininosuccinate lyase C-terminal RU84_RS17095 PF00206 Lyase RU84_RS17100 PF04362 Bacterial Fe(2+) trafficking RU84_RS17105 PF01895 PhoU domain RU84_RS17115 PF00892 EamA-like transporter family RU84_RS17130 PF01964 Radical SAM ThiC family RU84_RS17130 PF13667 ThiC-associated domain RU84_RS17135 PF00293 NUDIX domain RU84_RS17140 PF00149 Calcineurin-like phosphoesterase RU84_RS17145 PF01258 Prokaryotic dksA/traR C4-type zinc finger RU84_RS17150 PF00749 tRNA synthetases class I (E and Q), catalytic domain RU84_RS17155 PF01098 Cell cycle protein RU84_RS17160 PF02875 Mur ligase family, glutamate ligase domain RU84_RS17160 PF08245 Mur ligase middle domain RU84_RS17170 PF02421 Ferrous iron transport protein B RU84_RS17170 PF07670 Nucleoside recognition RU84_RS17170 PF07664 Ferrous iron transport protein B C terminus RU84_RS17180 PF02899 Phage integrase, N-terminal SAM-like domain RU84_RS17180 PF00589 Phage integrase family RU84_RS17185 PF13098 Thioredoxin-like domain RU84_RS17185 PF10411 Disulfide bond isomerase protein N-terminus RU84_RS17190 PF01842 ACT domain RU84_RS17190 PF03447 Homoserine dehydrogenase, NAD binding domain RU84_RS17190 PF00742 Homoserine dehydrogenase RU84_RS17195 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS17200 PF00768 D-alanyl-D-alanine carboxypeptidase RU84_RS17205 PF00196 Bacterial regulatory proteins, luxR family RU84_RS17205 PF00072 Response regulator receiver domain RU84_RS17210 PF00512 His Kinase A (phospho-acceptor) domain RU84_RS17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS17215 PF00072 Response regulator receiver domain RU84_RS17215 PF02954 Bacterial regulatory protein, Fis family RU84_RS17215 PF00158 Sigma-54 interaction domain RU84_RS17220 PF00595 PDZ domain RU84_RS17220 PF03572 Peptidase family S41 RU84_RS17225 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RU84_RS17225 PF01676 Metalloenzyme superfamily RU84_RS17230 PF03739 Lipopolysaccharide export system permease LptF/LptG RU84_RS17240 PF02789 Cytosol aminopeptidase family, N-terminal domain RU84_RS17240 PF00883 Cytosol aminopeptidase family, catalytic domain RU84_RS17260 PF00677 Lumazine binding domain RU84_RS17270 PF01872 RibD C-terminal domain RU84_RS17270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RU84_RS17275 PF03477 ATP cone domain RU84_RS17280 PF00909 Ammonium Transporter Family RU84_RS17285 PF00543 Nitrogen regulatory protein P-II RU84_RS17295 PF01078 Magnesium chelatase, subunit ChlI RU84_RS17295 PF13335 Magnesium chelatase, subunit ChlI C-terminal RU84_RS17300 PF00155 Aminotransferase class I and II RU84_RS17300 PF00392 Bacterial regulatory proteins, gntR family RU84_RS17310 PF00701 Dihydrodipicolinate synthetase family RU84_RS17320 PF03573 outer membrane porin, OprD family RU84_RS17325 PF00719 Inorganic pyrophosphatase RU84_RS17340 PF13193 AMP-binding enzyme C-terminal domain RU84_RS17340 PF00501 AMP-binding enzyme RU84_RS17345 PF00521 DNA gyrase/topoisomerase IV, subunit A RU84_RS17345 PF03989 DNA gyrase C-terminal domain, beta-propeller RU84_RS17350 PF07690 Major Facilitator Superfamily RU84_RS17355 PF03458 UPF0126 domain RU84_RS17360 PF02810 SEC-C motif RU84_RS17365 PF03471 Transporter associated domain RU84_RS17365 PF03741 Integral membrane protein TerC family RU84_RS17370 PF03641 Possible lysine decarboxylase RU84_RS17375 PF07690 Major Facilitator Superfamily RU84_RS17385 PF00817 impB/mucB/samB family RU84_RS17385 PF11799 impB/mucB/samB family C-terminal domain RU84_RS17385 PF11798 IMS family HHH motif RU84_RS17400 PF04055 Radical SAM superfamily RU84_RS17400 PF08497 Radical SAM N-terminal RU84_RS17400 PF11842 Domain of unknown function (DUF3362) RU84_RS17420 PF03358 NADPH-dependent FMN reductase RU84_RS17430 PF00291 Pyridoxal-phosphate dependent enzyme RU84_RS17465 PF00440 Bacterial regulatory proteins, tetR family RU84_RS17490 PF01327 Polypeptide deformylase RU84_RS17500 PF17782 DprA winged helix domain RU84_RS17500 PF02481 DNA recombination-mediator protein A RU84_RS17505 PF01300 Telomere recombination RU84_RS17510 PF00892 EamA-like transporter family RU84_RS17515 PF00440 Bacterial regulatory proteins, tetR family RU84_RS17520 PF07690 Major Facilitator Superfamily RU84_RS17530 PF00255 Glutathione peroxidase RU84_RS17540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RU84_RS17545 PF02874 ATP synthase alpha/beta family, beta-barrel domain RU84_RS17545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RU84_RS17550 PF00231 ATP synthase RU84_RS17555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RU84_RS17555 PF00306 ATP synthase alpha/beta chain, C terminal domain RU84_RS17555 PF02874 ATP synthase alpha/beta family, beta-barrel domain RU84_RS17560 PF00213 ATP synthase delta (OSCP) subunit RU84_RS17565 PF00430 ATP synthase B/B' CF(0) RU84_RS17570 PF00137 ATP synthase subunit C RU84_RS17575 PF00119 ATP synthase A chain RU84_RS17595 PF00005 ABC transporter RU84_RS17600 PF00950 ABC 3 transport family RU84_RS17605 PF01810 LysE type translocator RU84_RS17610 PF04261 Dyp-type peroxidase family RU84_RS17615 PF03949 Malic enzyme, NAD binding domain RU84_RS17615 PF00390 Malic enzyme, N-terminal domain RU84_RS17620 PF00750 tRNA synthetases class I (R) RU84_RS17620 PF05746 DALR anticodon binding domain RU84_RS17620 PF03485 Arginyl tRNA synthetase N terminal domain RU84_RS17640 PF02678 Pirin RU84_RS17640 PF05726 Pirin C-terminal cupin domain RU84_RS17650 PF03551 Transcriptional regulator PadR-like family RU84_RS17655 PF13427 Domain of unknown function (DUF4111) RU84_RS17655 PF01909 Nucleotidyltransferase domain RU84_RS17660 PF00117 Glutamine amidotransferase class-I RU84_RS17660 PF00958 GMP synthase C terminal domain RU84_RS17660 PF02540 NAD synthase RU84_RS17665 PF04286 Protein of unknown function (DUF445) RU84_RS17670 PF07681 DoxX RU84_RS17675 PF09335 SNARE associated Golgi protein RU84_RS17690 PF13614 AAA domain RU84_RS17700 PF01722 BolA-like protein RU84_RS17715 PF01648 4'-phosphopantetheinyl transferase superfamily RU84_RS17720 PF16363 GDP-mannose 4,6 dehydratase RU84_RS17735 PF00975 Thioesterase domain RU84_RS17735 PF00550 Phosphopantetheine attachment site RU84_RS17735 PF00501 AMP-binding enzyme RU84_RS17735 PF00668 Condensation domain RU84_RS17735 PF13193 AMP-binding enzyme C-terminal domain RU84_RS17740 PF14765 Polyketide synthase dehydratase RU84_RS17740 PF00550 Phosphopantetheine attachment site RU84_RS17740 PF16197 Ketoacyl-synthetase C-terminal extension RU84_RS17740 PF08242 Methyltransferase domain RU84_RS17740 PF02801 Beta-ketoacyl synthase, C-terminal domain RU84_RS17740 PF00975 Thioesterase domain RU84_RS17740 PF00109 Beta-ketoacyl synthase, N-terminal domain RU84_RS17745 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS17745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS17745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS17750 PF00501 AMP-binding enzyme RU84_RS17755 PF03472 Autoinducer binding domain RU84_RS17755 PF00196 Bacterial regulatory proteins, luxR family RU84_RS17765 PF00765 Autoinducer synthase RU84_RS17770 PF07690 Major Facilitator Superfamily RU84_RS17770 PF00083 Sugar (and other) transporter RU84_RS17775 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS17780 PF00378 Enoyl-CoA hydratase/isomerase RU84_RS17785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU84_RS17785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU84_RS17785 PF02770 Acyl-CoA dehydrogenase, middle domain RU84_RS17790 PF00501 AMP-binding enzyme RU84_RS17790 PF13193 AMP-binding enzyme C-terminal domain RU84_RS17795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RU84_RS17795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RU84_RS17800 PF00171 Aldehyde dehydrogenase family RU84_RS17805 PF03466 LysR substrate binding domain RU84_RS17805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS17810 PF00324 Amino acid permease RU84_RS17815 PF00324 Amino acid permease RU84_RS17820 PF01042 Endoribonuclease L-PSP RU84_RS17825 PF01168 Alanine racemase, N-terminal domain RU84_RS17825 PF00842 Alanine racemase, C-terminal domain RU84_RS17830 PF01266 FAD dependent oxidoreductase RU84_RS17835 PF01037 Lrp/AsnC ligand binding domain RU84_RS17845 PF00593 TonB dependent receptor RU84_RS17845 PF07715 TonB-dependent Receptor Plug Domain RU84_RS17860 PF00849 RNA pseudouridylate synthase RU84_RS17875 PF02801 Beta-ketoacyl synthase, C-terminal domain RU84_RS17875 PF00109 Beta-ketoacyl synthase, N-terminal domain RU84_RS17890 PF00293 NUDIX domain RU84_RS17905 PF00694 Aconitase C-terminal domain RU84_RS17905 PF00330 Aconitase family (aconitate hydratase) RU84_RS17910 PF00285 Citrate synthase, C-terminal domain RU84_RS17920 PF00392 Bacterial regulatory proteins, gntR family RU84_RS17920 PF07729 FCD domain RU84_RS17925 PF00155 Aminotransferase class I and II RU84_RS17930 PF09330 D-lactate dehydrogenase, membrane binding RU84_RS17930 PF01565 FAD binding domain RU84_RS17935 PF01070 FMN-dependent dehydrogenase RU84_RS17940 PF00392 Bacterial regulatory proteins, gntR family RU84_RS17940 PF07729 FCD domain RU84_RS17945 PF02652 L-lactate permease RU84_RS17950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RU84_RS17950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RU84_RS17950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RU84_RS17950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RU84_RS17955 PF16363 GDP-mannose 4,6 dehydratase RU84_RS17960 PF00342 Phosphoglucose isomerase RU84_RS17965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RU84_RS17965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RU84_RS17965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RU84_RS17970 PF00483 Nucleotidyl transferase RU84_RS17975 PF02397 Bacterial sugar transferase RU84_RS17980 PF00535 Glycosyl transferase family 2 RU84_RS17985 PF00534 Glycosyl transferases group 1 RU84_RS18000 PF01943 Polysaccharide biosynthesis protein RU84_RS18005 PF03102 NeuB family RU84_RS18005 PF08666 SAF domain RU84_RS18020 PF02348 Cytidylyltransferase RU84_RS18025 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RU84_RS18030 PF02719 Polysaccharide biosynthesis protein RU84_RS18035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RU84_RS18035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RU84_RS18035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RU84_RS18040 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RU84_RS18040 PF10531 SLBB domain RU84_RS18040 PF02563 Polysaccharide biosynthesis/export protein RU84_RS18045 PF01451 Low molecular weight phosphotyrosine protein phosphatase RU84_RS18050 PF13807 G-rich domain on putative tyrosine kinase RU84_RS18050 PF02706 Chain length determinant protein RU84_RS18050 PF13614 AAA domain RU84_RS18055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RU84_RS18055 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RU84_RS18060 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RU84_RS18060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RU84_RS18065 PF03023 Lipid II flippase MurJ RU84_RS18070 PF01510 N-acetylmuramoyl-L-alanine amidase RU84_RS18075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RU84_RS18075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RU84_RS18085 PF05506 Domain of unknown function (DUF756) RU84_RS18085 PF04185 Phosphoesterase family RU84_RS18090 PF03725 3' exoribonuclease family, domain 2 RU84_RS18090 PF01138 3' exoribonuclease family, domain 1 RU84_RS18095 PF00487 Fatty acid desaturase RU84_RS18100 PF00175 Oxidoreductase NAD-binding domain RU84_RS18105 PF00440 Bacterial regulatory proteins, tetR family RU84_RS18110 PF00440 Bacterial regulatory proteins, tetR family RU84_RS18110 PF08360 QacR-like protein, C-terminal region RU84_RS18115 PF01323 DSBA-like thioredoxin domain RU84_RS18125 PF13419 Haloacid dehalogenase-like hydrolase RU84_RS18130 PF00106 short chain dehydrogenase RU84_RS18145 PF00583 Acetyltransferase (GNAT) family RU84_RS18145 PF00696 Amino acid kinase family RU84_RS18150 PF09084 NMT1/THI5 like RU84_RS18155 PF09084 NMT1/THI5 like RU84_RS18160 PF00296 Luciferase-like monooxygenase RU84_RS18165 PF00528 Binding-protein-dependent transport system inner membrane component RU84_RS18170 PF00005 ABC transporter RU84_RS18175 PF00440 Bacterial regulatory proteins, tetR family RU84_RS18175 PF08362 YcdC-like protein, C-terminal region RU84_RS18180 PF01048 Phosphorylase superfamily RU84_RS18190 PF06574 FAD synthetase RU84_RS18190 PF01687 Riboflavin kinase RU84_RS18195 PF00133 tRNA synthetases class I (I, L, M and V) RU84_RS18195 PF08264 Anticodon-binding domain of tRNA RU84_RS18195 PF06827 Zinc finger found in FPG and IleRS RU84_RS18200 PF01252 Signal peptidase (SPase) II RU84_RS18205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RU84_RS18245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RU84_RS18250 PF07859 alpha/beta hydrolase fold RU84_RS18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU84_RS18270 PF03466 LysR substrate binding domain RU84_RS18275 PF01025 GrpE RU84_RS18280 PF00012 Hsp70 protein RU84_RS18300 PF13406 Transglycosylase SLT domain RU84_RS18305 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RU84_RS18305 PF02222 ATP-grasp domain RU84_RS18310 PF00731 AIR carboxylase RU84_RS18325 PF02875 Mur ligase family, glutamate ligase domain RU84_RS18325 PF08245 Mur ligase middle domain RU84_RS18325 PF01225 Mur ligase family, catalytic domain RU84_RS18335 PF01569 PAP2 superfamily RU84_RS18340 PF03741 Integral membrane protein TerC family RU84_RS18350 PF03738 Glutathionylspermidine synthase preATP-grasp RU84_RS18355 PF00355 Rieske [2Fe-2S] domain RU84_RS18360 PF01979 Amidohydrolase family RU84_RS18370 PF00156 Phosphoribosyl transferase domain RU84_RS18380 PF13098 Thioredoxin-like domain RU84_RS18380 PF10411 Disulfide bond isomerase protein N-terminus RU84_RS18385 PF16916 Dimerisation domain of Zinc Transporter RU84_RS18385 PF01545 Cation efflux family RU84_RS18390 PF02583 Metal-sensitive transcriptional repressor RU84_RS18395 PF01926 50S ribosome-binding GTPase RU84_RS18395 PF10396 GTP-binding protein TrmE N-terminus RU84_RS18395 PF12631 MnmE helical domain RU84_RS18400 PF02096 60Kd inner membrane protein RU84_RS18400 PF14849 YidC periplasmic domain RU84_RS18405 PF01809 Putative membrane protein insertion efficiency factor RU84_RS18410 PF00825 Ribonuclease P RU84_RS18415 PF00468 Ribosomal protein L34 RU84_RS18435 PF08299 Bacterial dnaA protein helix-turn-helix RU84_RS18435 PF11638 DnaA N-terminal domain RU84_RS18435 PF00308 Bacterial dnaA protein RU84_RS18470 PF00986 DNA gyrase B subunit, carboxyl terminus RU84_RS18470 PF00204 DNA gyrase B RU84_RS18470 PF18053 DNA gyrase B subunit insert domain RU84_RS18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU84_RS18470 PF01751 Toprim domain RU84_RS18555 PF02798 Glutathione S-transferase, N-terminal domain RU84_RS18555 PF00043 Glutathione S-transferase, C-terminal domain RU84_RS18645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RU84_RS18685 PF00684 DnaJ central domain RU84_RS18685 PF01556 DnaJ C terminal domain RU84_RS18685 PF00226 DnaJ domain RU84_RS18780 PF07995 Glucose / Sorbosone dehydrogenase RU84_RS18930 PF17392 Urocanase C-terminal domain RU84_RS18930 PF01175 Urocanase Rossmann-like domain RU84_RS18930 PF17391 Urocanase N-terminal domain RU84_RS18955 PF00324 Amino acid permease RU84_RS19240 PF00920 Dehydratase family RU84_RS19425 PF07922 Glycosyltransferase family 52