RU84_RS00125	PWY-6825	phosphatidylcholine biosynthesis V
RU84_RS00135	PWY-5101	L-isoleucine biosynthesis II
RU84_RS00135	PWY-5103	L-isoleucine biosynthesis III
RU84_RS00135	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS00135	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RU84_RS00160	PWY-1622	formaldehyde assimilation I (serine pathway)
RU84_RS00160	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RU84_RS00160	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS00160	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS00160	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RU84_RS00160	PWY-6549	L-glutamine biosynthesis III
RU84_RS00160	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RU84_RS00160	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RU84_RS00160	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS00195	PWY-2941	L-lysine biosynthesis II
RU84_RS00195	PWY-2942	L-lysine biosynthesis III
RU84_RS00195	PWY-5097	L-lysine biosynthesis VI
RU84_RS00295	PWY-6123	inosine-5'-phosphate biosynthesis I
RU84_RS00295	PWY-6124	inosine-5'-phosphate biosynthesis II
RU84_RS00295	PWY-7234	inosine-5'-phosphate biosynthesis III
RU84_RS00305	PWY-2941	L-lysine biosynthesis II
RU84_RS00305	PWY-2942	L-lysine biosynthesis III
RU84_RS00305	PWY-5097	L-lysine biosynthesis VI
RU84_RS00360	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RU84_RS00385	PWY-5028	L-histidine degradation II
RU84_RS00385	PWY-5030	L-histidine degradation III
RU84_RS00390	PWY-5028	L-histidine degradation II
RU84_RS00390	PWY-5030	L-histidine degradation III
RU84_RS00400	PWY-5028	L-histidine degradation II
RU84_RS00400	PWY-5030	L-histidine degradation III
RU84_RS00420	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS00420	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS00425	PWY-6749	CMP-legionaminate biosynthesis I
RU84_RS00430	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RU84_RS00430	PWY-5667	CDP-diacylglycerol biosynthesis I
RU84_RS00430	PWY-6453	stigma estolide biosynthesis
RU84_RS00430	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RU84_RS00430	PWY-7587	oleate biosynthesis III (cyanobacteria)
RU84_RS00435	PWY-5269	cardiolipin biosynthesis II
RU84_RS00435	PWY-5668	cardiolipin biosynthesis I
RU84_RS00440	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RU84_RS00440	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RU84_RS00440	PWY-6896	thiamin salvage I
RU84_RS00440	PWY-6897	thiamin salvage II
RU84_RS00450	PWY-6167	flavin biosynthesis II (archaea)
RU84_RS00450	PWY-6168	flavin biosynthesis III (fungi)
RU84_RS00455	PWY-6167	flavin biosynthesis II (archaea)
RU84_RS00455	PWY-6168	flavin biosynthesis III (fungi)
RU84_RS00455	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RU84_RS00485	PWY-5381	pyridine nucleotide cycling (plants)
RU84_RS00490	PWY-5350	thiosulfate disproportionation III (rhodanese)
RU84_RS00495	PWY-5669	phosphatidylethanolamine biosynthesis I
RU84_RS00515	PWY-6857	retinol biosynthesis
RU84_RS00565	PWY-6840	homoglutathione biosynthesis
RU84_RS00565	PWY-7255	ergothioneine biosynthesis I (bacteria)
RU84_RS00620	PWY-5694	allantoin degradation to glyoxylate I
RU84_RS00620	PWY-5705	allantoin degradation to glyoxylate III
RU84_RS00625	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
RU84_RS00645	PWY-5691	urate degradation to allantoin I
RU84_RS00645	PWY-7394	urate degradation to allantoin II
RU84_RS00650	PWY-5691	urate degradation to allantoin I
RU84_RS00650	PWY-7394	urate degradation to allantoin II
RU84_RS00705	PWY-5686	UMP biosynthesis
RU84_RS00725	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RU84_RS00725	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RU84_RS00725	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RU84_RS00725	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RU84_RS00730	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS00730	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS00735	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS00735	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS00755	PWY-2201	folate transformations I
RU84_RS00755	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS00770	PWY-6891	thiazole biosynthesis II (Bacillus)
RU84_RS00770	PWY-6892	thiazole biosynthesis I (E. coli)
RU84_RS00770	PWY-7560	methylerythritol phosphate pathway II
RU84_RS00805	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RU84_RS00805	PWY-6596	adenosine nucleotides degradation I
RU84_RS00805	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS00810	PWY-6749	CMP-legionaminate biosynthesis I
RU84_RS00815	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RU84_RS00815	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RU84_RS00845	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
RU84_RS00850	PWY-2201	folate transformations I
RU84_RS00865	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RU84_RS00865	PWY-7118	chitin degradation to ethanol
RU84_RS00885	PWY-7723	RU84_RS00885
RU84_RS00960	PWY-6899	base-degraded thiamin salvage
RU84_RS00960	PWY-7356	thiamin salvage IV (yeast)
RU84_RS01040	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RU84_RS01175	PWY-702	L-methionine biosynthesis II
RU84_RS01265	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RU84_RS01265	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS01265	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RU84_RS01265	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RU84_RS01275	PWY-5344	L-homocysteine biosynthesis
RU84_RS01275	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RU84_RS01305	PWY-6825	phosphatidylcholine biosynthesis V
RU84_RS01375	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RU84_RS01390	PWY-2201	folate transformations I
RU84_RS01410	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS01410	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS01415	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RU84_RS01415	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RU84_RS01415	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RU84_RS01460	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RU84_RS01465	PWY-6164	3-dehydroquinate biosynthesis I
RU84_RS01545	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS01600	PWY-6829	tRNA methylation (yeast)
RU84_RS01600	PWY-7285	methylwyosine biosynthesis
RU84_RS01600	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RU84_RS01685	PWY-6854	ethylene biosynthesis III (microbes)
RU84_RS01860	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RU84_RS01865	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RU84_RS01865	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RU84_RS01870	PWY-6168	flavin biosynthesis III (fungi)
RU84_RS01870	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RU84_RS01875	PWY-6891	thiazole biosynthesis II (Bacillus)
RU84_RS01875	PWY-6892	thiazole biosynthesis I (E. coli)
RU84_RS01875	PWY-7560	methylerythritol phosphate pathway II
RU84_RS01955	PWY-5667	CDP-diacylglycerol biosynthesis I
RU84_RS01955	PWY-6453	stigma estolide biosynthesis
RU84_RS01955	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RU84_RS01955	PWY-7587	oleate biosynthesis III (cyanobacteria)
RU84_RS02260	PWY-7731	RU84_RS02260
RU84_RS02310	PWY-1622	formaldehyde assimilation I (serine pathway)
RU84_RS02310	PWY-5392	reductive TCA cycle II
RU84_RS02310	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RU84_RS02310	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS02310	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS02310	PWY-6728	methylaspartate cycle
RU84_RS02310	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS02310	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RU84_RS02310	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS02335	PWY-5669	phosphatidylethanolamine biosynthesis I
RU84_RS02400	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS02400	PWY-5743	3-hydroxypropanoate cycle
RU84_RS02400	PWY-5744	glyoxylate assimilation
RU84_RS02400	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS02400	PWY-6679	jadomycin biosynthesis
RU84_RS02400	PWY-6722	candicidin biosynthesis
RU84_RS02400	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS02490	PWY-7294	xylose degradation IV
RU84_RS02490	PWY-7295	L-arabinose degradation IV
RU84_RS02680	PWY-6700	queuosine biosynthesis
RU84_RS02700	PWY-6700	queuosine biosynthesis
RU84_RS02930	PWY-5057	L-valine degradation II
RU84_RS02930	PWY-5076	L-leucine degradation III
RU84_RS02930	PWY-5078	L-isoleucine degradation II
RU84_RS02930	PWY-5101	L-isoleucine biosynthesis II
RU84_RS02930	PWY-5103	L-isoleucine biosynthesis III
RU84_RS02930	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS02930	PWY-5108	L-isoleucine biosynthesis V
RU84_RS02955	PWY-3221	dTDP-L-rhamnose biosynthesis II
RU84_RS02955	PWY-6808	dTDP-D-forosamine biosynthesis
RU84_RS02955	PWY-6942	dTDP-D-desosamine biosynthesis
RU84_RS02955	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RU84_RS02955	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RU84_RS02955	PWY-6974	dTDP-L-olivose biosynthesis
RU84_RS02955	PWY-6976	dTDP-L-mycarose biosynthesis
RU84_RS02955	PWY-7104	dTDP-L-megosamine biosynthesis
RU84_RS02955	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RU84_RS02955	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RU84_RS02955	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RU84_RS02955	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RU84_RS02955	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RU84_RS02955	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RU84_RS02955	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RU84_RS02955	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RU84_RS02955	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
RU84_RS02955	PWY-7688	RU84_RS02955
RU84_RS02965	PWY-3221	dTDP-L-rhamnose biosynthesis II
RU84_RS02965	PWY-6808	dTDP-D-forosamine biosynthesis
RU84_RS02965	PWY-6942	dTDP-D-desosamine biosynthesis
RU84_RS02965	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RU84_RS02965	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RU84_RS02965	PWY-6974	dTDP-L-olivose biosynthesis
RU84_RS02965	PWY-6976	dTDP-L-mycarose biosynthesis
RU84_RS02965	PWY-7104	dTDP-L-megosamine biosynthesis
RU84_RS02965	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RU84_RS02965	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RU84_RS02965	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RU84_RS02965	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RU84_RS02965	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RU84_RS02965	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RU84_RS02965	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RU84_RS02965	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RU84_RS02965	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
RU84_RS02965	PWY-7688	RU84_RS02965
RU84_RS03070	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RU84_RS03070	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RU84_RS03070	PWY-6268	adenosylcobalamin salvage from cobalamin
RU84_RS03070	PWY-6269	adenosylcobalamin salvage from cobinamide II
RU84_RS03115	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS03115	PWY-5743	3-hydroxypropanoate cycle
RU84_RS03115	PWY-5744	glyoxylate assimilation
RU84_RS03115	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS03115	PWY-6679	jadomycin biosynthesis
RU84_RS03115	PWY-6722	candicidin biosynthesis
RU84_RS03115	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS03120	PWY-2161	folate polyglutamylation
RU84_RS03185	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS03185	PWY-5109	2-methylbutanoate biosynthesis
RU84_RS03185	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RU84_RS03185	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RU84_RS03185	PWY-5177	glutaryl-CoA degradation
RU84_RS03185	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS03185	PWY-6435	4-hydroxybenzoate biosynthesis V
RU84_RS03185	PWY-6583	pyruvate fermentation to butanol I
RU84_RS03185	PWY-6863	pyruvate fermentation to hexanol
RU84_RS03185	PWY-6883	pyruvate fermentation to butanol II
RU84_RS03185	PWY-6944	androstenedione degradation
RU84_RS03185	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RU84_RS03185	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RU84_RS03185	PWY-7007	methyl ketone biosynthesis
RU84_RS03185	PWY-7046	4-coumarate degradation (anaerobic)
RU84_RS03185	PWY-7094	fatty acid salvage
RU84_RS03185	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RU84_RS03185	PWY-735	jasmonic acid biosynthesis
RU84_RS03185	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RU84_RS03185	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RU84_RS03185	PWY-7726	RU84_RS03185
RU84_RS03215	PWY-6683	sulfate reduction III (assimilatory)
RU84_RS03265	PWY-6825	phosphatidylcholine biosynthesis V
RU84_RS03555	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RU84_RS03635	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
RU84_RS03650	PWY-901	methylglyoxal degradation II
RU84_RS03840	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RU84_RS03845	PWY-5194	siroheme biosynthesis
RU84_RS03845	PWY-5441	S-methyl-L-methionine cycle
RU84_RS03845	PWY-702	L-methionine biosynthesis II
RU84_RS03845	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RU84_RS03850	PWY-6004	glycine betaine biosynthesis V (from glycine)
RU84_RS03880	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RU84_RS03880	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RU84_RS03930	PWY-3781	aerobic respiration I (cytochrome c)
RU84_RS03930	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RU84_RS03930	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RU84_RS03930	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS03930	PWY-6728	methylaspartate cycle
RU84_RS03930	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS03930	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS03930	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RU84_RS03935	PWY-3781	aerobic respiration I (cytochrome c)
RU84_RS03935	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RU84_RS03935	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RU84_RS03935	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS03935	PWY-6728	methylaspartate cycle
RU84_RS03935	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS03935	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS03935	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RU84_RS03940	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RU84_RS03945	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RU84_RS03950	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RU84_RS03950	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RU84_RS03955	PWY-5392	reductive TCA cycle II
RU84_RS03955	PWY-5537	pyruvate fermentation to acetate V
RU84_RS03955	PWY-5538	pyruvate fermentation to acetate VI
RU84_RS03955	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS03955	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS03955	PWY-6728	methylaspartate cycle
RU84_RS03955	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS03955	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RU84_RS03960	PWY-5392	reductive TCA cycle II
RU84_RS03960	PWY-5537	pyruvate fermentation to acetate V
RU84_RS03960	PWY-5538	pyruvate fermentation to acetate VI
RU84_RS03960	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS03960	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS03960	PWY-6728	methylaspartate cycle
RU84_RS03960	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS03960	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RU84_RS04035	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS04035	PWY-5686	UMP biosynthesis
RU84_RS04035	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS04040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS04040	PWY-5686	UMP biosynthesis
RU84_RS04040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS04070	PWY-6614	tetrahydrofolate biosynthesis
RU84_RS04105	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RU84_RS04105	PWY-2201	folate transformations I
RU84_RS04105	PWY-3841	folate transformations II
RU84_RS04105	PWY-5030	L-histidine degradation III
RU84_RS04105	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS04105	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RU84_RS04125	PWY-4261	glycerol degradation I
RU84_RS04130	PWY-4261	glycerol degradation I
RU84_RS04130	PWY-6118	glycerol-3-phosphate shuttle
RU84_RS04130	PWY-6952	glycerophosphodiester degradation
RU84_RS04135	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS04140	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RU84_RS04140	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RU84_RS04140	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RU84_RS04165	PWY-7039	phosphatidate metabolism, as a signaling molecule
RU84_RS04225	PWY-2582	brassinosteroid biosynthesis II
RU84_RS04225	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RU84_RS04225	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RU84_RS04225	PWY-6948	sitosterol degradation to androstenedione
RU84_RS04225	PWY-699	brassinosteroid biosynthesis I
RU84_RS04225	PWY-7299	progesterone biosynthesis
RU84_RS04310	PWY-181	photorespiration
RU84_RS04340	PWY-2941	L-lysine biosynthesis II
RU84_RS04340	PWY-2942	L-lysine biosynthesis III
RU84_RS04340	PWY-5097	L-lysine biosynthesis VI
RU84_RS04345	PWY-2941	L-lysine biosynthesis II
RU84_RS04345	PWY-5097	L-lysine biosynthesis VI
RU84_RS04475	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RU84_RS04475	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RU84_RS04480	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RU84_RS04480	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RU84_RS04480	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RU84_RS04535	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS04595	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RU84_RS04595	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RU84_RS04595	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RU84_RS04635	PWY-6482	diphthamide biosynthesis (archaea)
RU84_RS04635	PWY-7546	diphthamide biosynthesis (eukaryotes)
RU84_RS04645	PWY-6703	preQ<sub>0</sub> biosynthesis
RU84_RS04650	PWY-6703	preQ<sub>0</sub> biosynthesis
RU84_RS04695	PWY-6543	4-aminobenzoate biosynthesis
RU84_RS04705	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RU84_RS04705	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS04705	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS04705	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RU84_RS04705	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RU84_RS04705	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RU84_RS04715	PWY-5316	nicotine biosynthesis
RU84_RS04715	PWY-7342	superpathway of nicotine biosynthesis
RU84_RS04795	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RU84_RS04845	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS04845	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS04845	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS04845	PWY-7003	glycerol degradation to butanol
RU84_RS04865	PWY-3341	L-proline biosynthesis III
RU84_RS04865	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RU84_RS04885	PWY-723	alkylnitronates degradation
RU84_RS04900	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RU84_RS04955	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS04955	PWY-6549	L-glutamine biosynthesis III
RU84_RS04955	PWY-6728	methylaspartate cycle
RU84_RS04955	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS04955	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS04955	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS04955	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RU84_RS04965	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS04965	PWY-6549	L-glutamine biosynthesis III
RU84_RS04965	PWY-6728	methylaspartate cycle
RU84_RS04965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS04965	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS04965	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS04965	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RU84_RS05025	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RU84_RS05025	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RU84_RS05025	PWY-6897	thiamin salvage II
RU84_RS05025	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RU84_RS05025	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RU84_RS05025	PWY-7356	thiamin salvage IV (yeast)
RU84_RS05025	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RU84_RS05030	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RU84_RS05085	PWY-6409	pyoverdine I biosynthesis
RU84_RS05085	PWY-6562	norspermidine biosynthesis
RU84_RS05085	PWY-761	rhizobactin 1021 biosynthesis
RU84_RS05150	PWY-6123	inosine-5'-phosphate biosynthesis I
RU84_RS05150	PWY-6124	inosine-5'-phosphate biosynthesis II
RU84_RS05150	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS05150	PWY-7234	inosine-5'-phosphate biosynthesis III
RU84_RS05175	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RU84_RS05175	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RU84_RS05190	PWY-5381	pyridine nucleotide cycling (plants)
RU84_RS05190	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RU84_RS05190	PWY-6596	adenosine nucleotides degradation I
RU84_RS05190	PWY-6606	guanosine nucleotides degradation II
RU84_RS05190	PWY-6607	guanosine nucleotides degradation I
RU84_RS05190	PWY-6608	guanosine nucleotides degradation III
RU84_RS05190	PWY-7185	UTP and CTP dephosphorylation I
RU84_RS05215	PWY-5386	methylglyoxal degradation I
RU84_RS05280	PWY-6823	molybdenum cofactor biosynthesis
RU84_RS05360	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RU84_RS05365	PWY-6173	histamine biosynthesis
RU84_RS05390	PWY-6012	acyl carrier protein metabolism I
RU84_RS05390	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RU84_RS05395	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RU84_RS05395	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RU84_RS05395	PWY-6406	salicylate biosynthesis I
RU84_RS05405	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RU84_RS05405	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RU84_RS05430	PWY-5663	tetrahydrobiopterin biosynthesis I
RU84_RS05430	PWY-5664	tetrahydrobiopterin biosynthesis II
RU84_RS05430	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RU84_RS05430	PWY-6703	preQ<sub>0</sub> biosynthesis
RU84_RS05430	PWY-6983	tetrahydrobiopterin biosynthesis III
RU84_RS05430	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RU84_RS05435	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS05435	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RU84_RS05435	PWY-6538	caffeine degradation III (bacteria, via demethylation)
RU84_RS05435	PWY-6596	adenosine nucleotides degradation I
RU84_RS05435	PWY-6606	guanosine nucleotides degradation II
RU84_RS05435	PWY-6607	guanosine nucleotides degradation I
RU84_RS05435	PWY-6608	guanosine nucleotides degradation III
RU84_RS05435	PWY-6999	theophylline degradation
RU84_RS05440	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS05440	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RU84_RS05440	PWY-6538	caffeine degradation III (bacteria, via demethylation)
RU84_RS05440	PWY-6596	adenosine nucleotides degradation I
RU84_RS05440	PWY-6606	guanosine nucleotides degradation II
RU84_RS05440	PWY-6607	guanosine nucleotides degradation I
RU84_RS05440	PWY-6608	guanosine nucleotides degradation III
RU84_RS05440	PWY-6999	theophylline degradation
RU84_RS05475	PWY-5958	acridone alkaloid biosynthesis
RU84_RS05475	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RU84_RS05475	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RU84_RS05490	PWY-381	nitrate reduction II (assimilatory)
RU84_RS05490	PWY-5675	nitrate reduction V (assimilatory)
RU84_RS05490	PWY-6549	L-glutamine biosynthesis III
RU84_RS05490	PWY-6963	ammonia assimilation cycle I
RU84_RS05490	PWY-6964	ammonia assimilation cycle II
RU84_RS05495	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
RU84_RS05495	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RU84_RS05495	PWY-6148	tetrahydromethanopterin biosynthesis
RU84_RS05505	PWY-6857	retinol biosynthesis
RU84_RS05535	PWY-6854	ethylene biosynthesis III (microbes)
RU84_RS05555	PWY-1281	sulfoacetaldehyde degradation I
RU84_RS05555	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RU84_RS05555	PWY-5482	pyruvate fermentation to acetate II
RU84_RS05555	PWY-5485	pyruvate fermentation to acetate IV
RU84_RS05555	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS05555	PWY-6637	sulfolactate degradation II
RU84_RS05555	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RU84_RS05565	PWY-2201	folate transformations I
RU84_RS05570	PWY-2201	folate transformations I
RU84_RS05570	PWY-3841	folate transformations II
RU84_RS05575	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RU84_RS05595	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RU84_RS05595	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RU84_RS05685	PWY-6700	queuosine biosynthesis
RU84_RS05715	PWY-6857	retinol biosynthesis
RU84_RS05720	PWY-1622	formaldehyde assimilation I (serine pathway)
RU84_RS05720	PWY-181	photorespiration
RU84_RS05720	PWY-2161	folate polyglutamylation
RU84_RS05720	PWY-2201	folate transformations I
RU84_RS05720	PWY-3661	glycine betaine degradation I
RU84_RS05720	PWY-3661-1	glycine betaine degradation II (mammalian)
RU84_RS05720	PWY-3841	folate transformations II
RU84_RS05720	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS05830	PWY-6502	oxidized GTP and dGTP detoxification
RU84_RS05830	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RU84_RS05830	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RU84_RS05830	PWY-6897	thiamin salvage II
RU84_RS05830	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RU84_RS05830	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RU84_RS05830	PWY-7356	thiamin salvage IV (yeast)
RU84_RS05830	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RU84_RS05840	PWY-1001	cellulose biosynthesis
RU84_RS05840	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RU84_RS05840	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RU84_RS05840	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RU84_RS05840	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RU84_RS05845	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RU84_RS05845	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RU84_RS05845	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RU84_RS05875	PWY-3461	L-tyrosine biosynthesis II
RU84_RS05875	PWY-3462	L-phenylalanine biosynthesis II
RU84_RS05875	PWY-6120	L-tyrosine biosynthesis III
RU84_RS05875	PWY-6627	salinosporamide A biosynthesis
RU84_RS05875	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RU84_RS05875	PWY-7626	bacilysin biosynthesis
RU84_RS05880	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RU84_RS05880	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
RU84_RS05915	PWY-6891	thiazole biosynthesis II (Bacillus)
RU84_RS05915	PWY-6892	thiazole biosynthesis I (E. coli)
RU84_RS05960	PWY-5667	CDP-diacylglycerol biosynthesis I
RU84_RS05960	PWY-5981	CDP-diacylglycerol biosynthesis III
RU84_RS05980	PWY-5686	UMP biosynthesis
RU84_RS05990	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RU84_RS05990	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RU84_RS05990	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RU84_RS05990	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RU84_RS06025	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RU84_RS06025	PWY-5368	dimorphecolate biosynthesis
RU84_RS06025	PWY-5995	linoleate biosynthesis I (plants)
RU84_RS06025	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RU84_RS06025	PWY-6803	phosphatidylcholine acyl editing
RU84_RS06025	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RU84_RS06025	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RU84_RS06025	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RU84_RS06025	PWY-7470	phosphatidylcholine biosynthesis VII
RU84_RS06025	PWY-7618	ricinoleate biosynthesis
RU84_RS06130	PWY-5642	2,4-dinitrotoluene degradation
RU84_RS06130	PWY-6373	acrylate degradation
RU84_RS06280	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS06280	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RU84_RS06280	PWY-6638	sulfolactate degradation III
RU84_RS06280	PWY-6642	(<i>R</i>)-cysteate degradation
RU84_RS06280	PWY-6643	coenzyme M biosynthesis II
RU84_RS06280	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RU84_RS06280	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RU84_RS06280	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS06315	PWY-5691	urate degradation to allantoin I
RU84_RS06315	PWY-7394	urate degradation to allantoin II
RU84_RS06395	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS06395	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS06445	PWY-5386	methylglyoxal degradation I
RU84_RS06465	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RU84_RS06465	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RU84_RS06465	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RU84_RS06470	PWY-6123	inosine-5'-phosphate biosynthesis I
RU84_RS06470	PWY-6124	inosine-5'-phosphate biosynthesis II
RU84_RS06470	PWY-7234	inosine-5'-phosphate biosynthesis III
RU84_RS06525	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS06565	PWY-3781	aerobic respiration I (cytochrome c)
RU84_RS06565	PWY-4521	arsenite oxidation I (respiratory)
RU84_RS06565	PWY-6692	Fe(II) oxidation
RU84_RS06565	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RU84_RS06565	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
RU84_RS06580	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS06685	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RU84_RS06685	PWY-6148	tetrahydromethanopterin biosynthesis
RU84_RS06685	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RU84_RS06685	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RU84_RS06690	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RU84_RS06690	PWY-6148	tetrahydromethanopterin biosynthesis
RU84_RS06690	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RU84_RS06690	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RU84_RS06720	PWY-381	nitrate reduction II (assimilatory)
RU84_RS06720	PWY-5675	nitrate reduction V (assimilatory)
RU84_RS06720	PWY-6549	L-glutamine biosynthesis III
RU84_RS06720	PWY-6963	ammonia assimilation cycle I
RU84_RS06720	PWY-6964	ammonia assimilation cycle II
RU84_RS06755	PWY-5747	2-methylcitrate cycle II
RU84_RS06830	PWY-2781	<i>cis</i>-zeatin biosynthesis
RU84_RS06860	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RU84_RS06915	PWY-6897	thiamin salvage II
RU84_RS06915	PWY-7356	thiamin salvage IV (yeast)
RU84_RS06915	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RU84_RS06970	PWY-3461	L-tyrosine biosynthesis II
RU84_RS06970	PWY-3462	L-phenylalanine biosynthesis II
RU84_RS06970	PWY-6120	L-tyrosine biosynthesis III
RU84_RS06970	PWY-6627	salinosporamide A biosynthesis
RU84_RS06970	PWY-7626	bacilysin biosynthesis
RU84_RS07110	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RU84_RS07110	PWY-5723	Rubisco shunt
RU84_RS07195	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS07195	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS07270	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RU84_RS07270	PWY-6416	quinate degradation II
RU84_RS07270	PWY-6707	gallate biosynthesis
RU84_RS07295	PWY-6683	sulfate reduction III (assimilatory)
RU84_RS07310	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RU84_RS07310	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
RU84_RS07320	PWY-6823	molybdenum cofactor biosynthesis
RU84_RS07330	PWY-6823	molybdenum cofactor biosynthesis
RU84_RS07340	PWY-6823	molybdenum cofactor biosynthesis
RU84_RS07385	PWY-5392	reductive TCA cycle II
RU84_RS07385	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RU84_RS07385	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS07385	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS07385	PWY-6728	methylaspartate cycle
RU84_RS07385	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS07385	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS07385	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RU84_RS07415	PWY-7560	methylerythritol phosphate pathway II
RU84_RS07425	PWY-4981	L-proline biosynthesis II (from arginine)
RU84_RS07425	PWY-4984	urea cycle
RU84_RS07425	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS07465	PWY-5667	CDP-diacylglycerol biosynthesis I
RU84_RS07465	PWY-5981	CDP-diacylglycerol biosynthesis III
RU84_RS07470	PWY-7294	xylose degradation IV
RU84_RS07470	PWY-7295	L-arabinose degradation IV
RU84_RS07470	PWY-7560	methylerythritol phosphate pathway II
RU84_RS07495	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RU84_RS07495	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RU84_RS07495	PWY-5989	stearate biosynthesis II (bacteria and plants)
RU84_RS07495	PWY-5994	palmitate biosynthesis I (animals and fungi)
RU84_RS07495	PWY-6113	superpathway of mycolate biosynthesis
RU84_RS07495	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RU84_RS07495	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RU84_RS07495	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS07495	PWY-7663	gondoate biosynthesis (anaerobic)
RU84_RS07495	PWY-7664	oleate biosynthesis IV (anaerobic)
RU84_RS07495	PWYG-321	mycolate biosynthesis
RU84_RS07560	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RU84_RS07560	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RU84_RS07590	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
RU84_RS07730	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
RU84_RS07775	PWY-6803	phosphatidylcholine acyl editing
RU84_RS07775	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RU84_RS07775	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RU84_RS07775	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
RU84_RS07795	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RU84_RS07795	PWY-5723	Rubisco shunt
RU84_RS07810	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS07810	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS07835	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RU84_RS07835	PWY-6164	3-dehydroquinate biosynthesis I
RU84_RS07835	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RU84_RS07880	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RU84_RS07880	PWY-7177	UTP and CTP dephosphorylation II
RU84_RS07880	PWY-7185	UTP and CTP dephosphorylation I
RU84_RS07885	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RU84_RS07885	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RU84_RS07890	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS07890	PWY-1622	formaldehyde assimilation I (serine pathway)
RU84_RS07890	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RU84_RS07890	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS07890	PWY-5723	Rubisco shunt
RU84_RS07890	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS07890	PWY-6886	1-butanol autotrophic biosynthesis
RU84_RS07890	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS07890	PWY-7003	glycerol degradation to butanol
RU84_RS07890	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS07890	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RU84_RS07905	PWY-7560	methylerythritol phosphate pathway II
RU84_RS07920	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS07920	PWY-2361	3-oxoadipate degradation
RU84_RS07920	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RU84_RS07925	PWY-6123	inosine-5'-phosphate biosynthesis I
RU84_RS07925	PWY-6124	inosine-5'-phosphate biosynthesis II
RU84_RS07925	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS07925	PWY-7234	inosine-5'-phosphate biosynthesis III
RU84_RS07930	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RU84_RS07955	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RU84_RS07955	PWY-6416	quinate degradation II
RU84_RS07955	PWY-6707	gallate biosynthesis
RU84_RS08040	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RU84_RS08090	PWY-5751	phenylethanol biosynthesis
RU84_RS08105	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RU84_RS08110	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS08110	PWY-2361	3-oxoadipate degradation
RU84_RS08110	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RU84_RS08130	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RU84_RS08135	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS08135	PWY-1622	formaldehyde assimilation I (serine pathway)
RU84_RS08135	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RU84_RS08135	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS08135	PWY-5723	Rubisco shunt
RU84_RS08135	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS08135	PWY-6886	1-butanol autotrophic biosynthesis
RU84_RS08135	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS08135	PWY-7003	glycerol degradation to butanol
RU84_RS08135	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS08135	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RU84_RS08155	PWY-5101	L-isoleucine biosynthesis II
RU84_RS08155	PWY-5103	L-isoleucine biosynthesis III
RU84_RS08155	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS08155	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RU84_RS08395	PWY-5101	L-isoleucine biosynthesis II
RU84_RS08395	PWY-5103	L-isoleucine biosynthesis III
RU84_RS08395	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS08395	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RU84_RS08470	PWY-5381	pyridine nucleotide cycling (plants)
RU84_RS08480	PWY-2201	folate transformations I
RU84_RS08480	PWY-3841	folate transformations II
RU84_RS08515	PWY-5381	pyridine nucleotide cycling (plants)
RU84_RS08515	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RU84_RS08515	PWY-6596	adenosine nucleotides degradation I
RU84_RS08515	PWY-6606	guanosine nucleotides degradation II
RU84_RS08515	PWY-6607	guanosine nucleotides degradation I
RU84_RS08515	PWY-6608	guanosine nucleotides degradation III
RU84_RS08515	PWY-7185	UTP and CTP dephosphorylation I
RU84_RS08665	PWY-5392	reductive TCA cycle II
RU84_RS08665	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RU84_RS08665	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS08665	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS08665	PWY-6728	methylaspartate cycle
RU84_RS08665	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS08665	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS08665	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RU84_RS08780	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RU84_RS08785	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RU84_RS08785	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RU84_RS08805	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RU84_RS08805	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RU84_RS08825	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RU84_RS08895	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RU84_RS08955	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RU84_RS08955	PWY-622	starch biosynthesis
RU84_RS08985	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RU84_RS08985	PWY-6164	3-dehydroquinate biosynthesis I
RU84_RS08985	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RU84_RS08990	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RU84_RS08990	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RU84_RS08990	PWY-6269	adenosylcobalamin salvage from cobinamide II
RU84_RS09005	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RU84_RS09005	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RU84_RS09005	PWY-6269	adenosylcobalamin salvage from cobinamide II
RU84_RS09010	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RU84_RS09010	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RU84_RS09010	PWY-6269	adenosylcobalamin salvage from cobinamide II
RU84_RS09145	PWY-6823	molybdenum cofactor biosynthesis
RU84_RS09145	PWY-6891	thiazole biosynthesis II (Bacillus)
RU84_RS09145	PWY-6892	thiazole biosynthesis I (E. coli)
RU84_RS09145	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RU84_RS09295	PWY-6728	methylaspartate cycle
RU84_RS09295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS09295	PWY-7118	chitin degradation to ethanol
RU84_RS09295	PWY-7294	xylose degradation IV
RU84_RS09295	PWY-7295	L-arabinose degradation IV
RU84_RS09320	PWY-5686	UMP biosynthesis
RU84_RS09340	PWY-7205	CMP phosphorylation
RU84_RS09410	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RU84_RS09470	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS09470	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RU84_RS09470	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS09470	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS09470	PWY-7385	1,3-propanediol biosynthesis (engineered)
RU84_RS09480	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS09480	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS09480	PWY-6886	1-butanol autotrophic biosynthesis
RU84_RS09480	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS09480	PWY-7003	glycerol degradation to butanol
RU84_RS09560	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RU84_RS09560	PWY-6853	ethylene biosynthesis II (microbes)
RU84_RS09560	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RU84_RS09600	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RU84_RS09600	PWY-5723	Rubisco shunt
RU84_RS09600	PWY-6891	thiazole biosynthesis II (Bacillus)
RU84_RS09600	PWY-6892	thiazole biosynthesis I (E. coli)
RU84_RS09600	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS09600	PWY-7560	methylerythritol phosphate pathway II
RU84_RS09605	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RU84_RS09605	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RU84_RS09645	PWY-6938	NADH repair
RU84_RS09650	PWY-6700	queuosine biosynthesis
RU84_RS09655	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RU84_RS09930	PWY-6004	glycine betaine biosynthesis V (from glycine)
RU84_RS09935	PWY-6936	seleno-amino acid biosynthesis
RU84_RS09935	PWY-7274	D-cycloserine biosynthesis
RU84_RS09980	PWY-4202	arsenate detoxification I (glutaredoxin)
RU84_RS09980	PWY-4621	arsenate detoxification II (glutaredoxin)
RU84_RS10015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS10015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS10100	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS10100	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RU84_RS10100	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS10105	PWY-5796	malonate decarboxylase activation
RU84_RS10110	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS10110	PWY-5743	3-hydroxypropanoate cycle
RU84_RS10110	PWY-5744	glyoxylate assimilation
RU84_RS10110	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS10110	PWY-6060	malonate degradation II (biotin-dependent)
RU84_RS10110	PWY-6679	jadomycin biosynthesis
RU84_RS10110	PWY-6722	candicidin biosynthesis
RU84_RS10110	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS10115	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS10115	PWY-5743	3-hydroxypropanoate cycle
RU84_RS10115	PWY-5744	glyoxylate assimilation
RU84_RS10115	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS10115	PWY-6060	malonate degradation II (biotin-dependent)
RU84_RS10115	PWY-6679	jadomycin biosynthesis
RU84_RS10115	PWY-6722	candicidin biosynthesis
RU84_RS10115	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS10125	PWY-5796	malonate decarboxylase activation
RU84_RS10130	PWY-5794	malonate degradation I (biotin-independent)
RU84_RS10130	PWY-6060	malonate degradation II (biotin-dependent)
RU84_RS10210	PWY-6936	seleno-amino acid biosynthesis
RU84_RS10210	PWY-7274	D-cycloserine biosynthesis
RU84_RS10220	PWY-6823	molybdenum cofactor biosynthesis
RU84_RS10220	PWY-6891	thiazole biosynthesis II (Bacillus)
RU84_RS10220	PWY-6892	thiazole biosynthesis I (E. coli)
RU84_RS10220	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RU84_RS10400	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS10400	PWY-5743	3-hydroxypropanoate cycle
RU84_RS10400	PWY-5744	glyoxylate assimilation
RU84_RS10400	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS10400	PWY-6679	jadomycin biosynthesis
RU84_RS10400	PWY-6722	candicidin biosynthesis
RU84_RS10400	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS10485	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS10485	PWY-5109	2-methylbutanoate biosynthesis
RU84_RS10485	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RU84_RS10485	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RU84_RS10485	PWY-5177	glutaryl-CoA degradation
RU84_RS10485	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS10485	PWY-6435	4-hydroxybenzoate biosynthesis V
RU84_RS10485	PWY-6583	pyruvate fermentation to butanol I
RU84_RS10485	PWY-6863	pyruvate fermentation to hexanol
RU84_RS10485	PWY-6883	pyruvate fermentation to butanol II
RU84_RS10485	PWY-6944	androstenedione degradation
RU84_RS10485	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RU84_RS10485	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RU84_RS10485	PWY-7007	methyl ketone biosynthesis
RU84_RS10485	PWY-7046	4-coumarate degradation (anaerobic)
RU84_RS10485	PWY-7094	fatty acid salvage
RU84_RS10485	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RU84_RS10485	PWY-735	jasmonic acid biosynthesis
RU84_RS10485	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RU84_RS10485	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RU84_RS10485	PWY-7726	RU84_RS10485
RU84_RS10505	PWY-723	alkylnitronates degradation
RU84_RS10540	PWY-6832	2-aminoethylphosphonate degradation II
RU84_RS10575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS10720	PWY-1341	phenylacetate degradation II (anaerobic)
RU84_RS10720	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RU84_RS10720	PWY-7716	RU84_RS10720
RU84_RS10725	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS10725	PWY-2361	3-oxoadipate degradation
RU84_RS10725	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RU84_RS10730	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS10730	PWY-5109	2-methylbutanoate biosynthesis
RU84_RS10730	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RU84_RS10730	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RU84_RS10730	PWY-5177	glutaryl-CoA degradation
RU84_RS10730	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS10730	PWY-6435	4-hydroxybenzoate biosynthesis V
RU84_RS10730	PWY-6583	pyruvate fermentation to butanol I
RU84_RS10730	PWY-6863	pyruvate fermentation to hexanol
RU84_RS10730	PWY-6883	pyruvate fermentation to butanol II
RU84_RS10730	PWY-6944	androstenedione degradation
RU84_RS10730	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RU84_RS10730	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RU84_RS10730	PWY-7007	methyl ketone biosynthesis
RU84_RS10730	PWY-7046	4-coumarate degradation (anaerobic)
RU84_RS10730	PWY-7094	fatty acid salvage
RU84_RS10730	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RU84_RS10730	PWY-735	jasmonic acid biosynthesis
RU84_RS10730	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RU84_RS10730	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RU84_RS10730	PWY-7726	RU84_RS10730
RU84_RS10765	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RU84_RS10970	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS10970	PWY-5109	2-methylbutanoate biosynthesis
RU84_RS10970	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RU84_RS10970	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RU84_RS10970	PWY-5177	glutaryl-CoA degradation
RU84_RS10970	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS10970	PWY-6435	4-hydroxybenzoate biosynthesis V
RU84_RS10970	PWY-6583	pyruvate fermentation to butanol I
RU84_RS10970	PWY-6863	pyruvate fermentation to hexanol
RU84_RS10970	PWY-6883	pyruvate fermentation to butanol II
RU84_RS10970	PWY-6944	androstenedione degradation
RU84_RS10970	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RU84_RS10970	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RU84_RS10970	PWY-7007	methyl ketone biosynthesis
RU84_RS10970	PWY-7046	4-coumarate degradation (anaerobic)
RU84_RS10970	PWY-7094	fatty acid salvage
RU84_RS10970	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RU84_RS10970	PWY-735	jasmonic acid biosynthesis
RU84_RS10970	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RU84_RS10970	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RU84_RS10970	PWY-7726	RU84_RS10970
RU84_RS11045	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RU84_RS11100	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RU84_RS11100	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RU84_RS11170	PWY-3341	L-proline biosynthesis III
RU84_RS11170	PWY-4981	L-proline biosynthesis II (from arginine)
RU84_RS11170	PWY-6344	L-ornithine degradation II (Stickland reaction)
RU84_RS11245	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RU84_RS11270	PWY-5418	phenol degradation I (aerobic)
RU84_RS11290	PWY-5418	phenol degradation I (aerobic)
RU84_RS11345	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS11420	PWY-5686	UMP biosynthesis
RU84_RS11430	PWY-6825	phosphatidylcholine biosynthesis V
RU84_RS11490	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS11505	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS11505	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS11505	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS11505	PWY-7003	glycerol degradation to butanol
RU84_RS11515	PWY-2941	L-lysine biosynthesis II
RU84_RS11515	PWY-2942	L-lysine biosynthesis III
RU84_RS11515	PWY-5097	L-lysine biosynthesis VI
RU84_RS11515	PWY-6559	spermidine biosynthesis II
RU84_RS11515	PWY-6562	norspermidine biosynthesis
RU84_RS11515	PWY-7153	grixazone biosynthesis
RU84_RS11540	PWY-6610	adenine and adenosine salvage IV
RU84_RS11710	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
RU84_RS11725	PWY-6486	D-galacturonate degradation II
RU84_RS11725	PWY-6497	D-galactarate degradation II
RU84_RS11725	PWY-6499	D-glucarate degradation II
RU84_RS11725	PWY-6501	D-glucuronate degradation II
RU84_RS11730	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS11730	PWY-1622	formaldehyde assimilation I (serine pathway)
RU84_RS11730	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RU84_RS11730	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS11730	PWY-5723	Rubisco shunt
RU84_RS11730	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS11730	PWY-6499	D-glucarate degradation II
RU84_RS11730	PWY-6886	1-butanol autotrophic biosynthesis
RU84_RS11730	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS11730	PWY-7003	glycerol degradation to butanol
RU84_RS11730	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS11730	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RU84_RS11805	PWY-2	putrescine degradation IV
RU84_RS11805	PWY-3	putrescine degradation V
RU84_RS12080	PWY-4983	L-citrulline-nitric oxide cycle
RU84_RS12080	PWY-4984	urea cycle
RU84_RS12080	PWY-5	canavanine biosynthesis
RU84_RS12080	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS12080	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS12090	PWY-5686	UMP biosynthesis
RU84_RS12150	PWY-5381	pyridine nucleotide cycling (plants)
RU84_RS12170	PWY-2201	folate transformations I
RU84_RS12610	PWY-6825	phosphatidylcholine biosynthesis V
RU84_RS12640	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS12660	PWY-6825	phosphatidylcholine biosynthesis V
RU84_RS12685	PWY-5704	urea degradation II
RU84_RS12690	PWY-5704	urea degradation II
RU84_RS12695	PWY-5704	urea degradation II
RU84_RS12715	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS12745	PWY-5278	sulfite oxidation III
RU84_RS12745	PWY-5340	sulfate activation for sulfonation
RU84_RS12745	PWY-6683	sulfate reduction III (assimilatory)
RU84_RS12745	PWY-6932	selenate reduction
RU84_RS12750	PWY-5278	sulfite oxidation III
RU84_RS12750	PWY-5340	sulfate activation for sulfonation
RU84_RS12750	PWY-6683	sulfate reduction III (assimilatory)
RU84_RS12750	PWY-6932	selenate reduction
RU84_RS12830	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RU84_RS12830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS12830	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RU84_RS12830	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RU84_RS12890	PWY-2201	folate transformations I
RU84_RS12890	PWY-3841	folate transformations II
RU84_RS12900	PWY-6891	thiazole biosynthesis II (Bacillus)
RU84_RS12900	PWY-6892	thiazole biosynthesis I (E. coli)
RU84_RS12900	PWY-7560	methylerythritol phosphate pathway II
RU84_RS12925	PWY-6317	galactose degradation I (Leloir pathway)
RU84_RS13110	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RU84_RS13110	PWY-7494	choline degradation IV
RU84_RS13115	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RU84_RS13115	PWY-7494	choline degradation IV
RU84_RS13120	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS13660	PWY-4041	&gamma;-glutamyl cycle
RU84_RS13660	PWY-5826	hypoglycin biosynthesis
RU84_RS13680	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RU84_RS13680	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RU84_RS13720	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS13770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS13770	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS13775	PWY-6749	CMP-legionaminate biosynthesis I
RU84_RS13780	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RU84_RS13780	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS13780	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS13780	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RU84_RS13860	PWY-6902	chitin degradation II
RU84_RS13915	PWY-5381	pyridine nucleotide cycling (plants)
RU84_RS13915	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RU84_RS14350	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RU84_RS14365	PWY-7560	methylerythritol phosphate pathway II
RU84_RS14400	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RU84_RS14405	PWY-5155	&beta;-alanine biosynthesis III
RU84_RS14420	PWY-6167	flavin biosynthesis II (archaea)
RU84_RS14420	PWY-6168	flavin biosynthesis III (fungi)
RU84_RS14445	PWY-5367	petroselinate biosynthesis
RU84_RS14445	PWY-5515	L-arabinose degradation II
RU84_RS14445	PWY-5525	D-glucuronate degradation I
RU84_RS14445	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RU84_RS14445	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RU84_RS14445	PWY-5989	stearate biosynthesis II (bacteria and plants)
RU84_RS14445	PWY-5994	palmitate biosynthesis I (animals and fungi)
RU84_RS14445	PWY-6113	superpathway of mycolate biosynthesis
RU84_RS14445	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RU84_RS14445	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RU84_RS14445	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS14445	PWY-7663	gondoate biosynthesis (anaerobic)
RU84_RS14445	PWY-7664	oleate biosynthesis IV (anaerobic)
RU84_RS14445	PWYG-321	mycolate biosynthesis
RU84_RS14450	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS14450	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RU84_RS14450	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS14490	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RU84_RS14495	PWY-2201	folate transformations I
RU84_RS14495	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RU84_RS14565	PWY-3961	phosphopantothenate biosynthesis II
RU84_RS14610	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS14720	PWY-7183	pyrimidine nucleobases salvage I
RU84_RS14815	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RU84_RS14815	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS14815	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RU84_RS14815	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RU84_RS14815	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS14815	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS14815	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS14815	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RU84_RS14825	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RU84_RS14825	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS14825	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RU84_RS14825	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RU84_RS14825	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS14825	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS14825	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS14825	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RU84_RS14865	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RU84_RS14865	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RU84_RS14865	PWY-6936	seleno-amino acid biosynthesis
RU84_RS14865	PWY-702	L-methionine biosynthesis II
RU84_RS14960	PWY-6609	adenine and adenosine salvage III
RU84_RS14960	PWY-6611	adenine and adenosine salvage V
RU84_RS14960	PWY-7179	purine deoxyribonucleosides degradation I
RU84_RS14960	PWY-7179-1	purine deoxyribonucleosides degradation
RU84_RS14985	PWY-5316	nicotine biosynthesis
RU84_RS14985	PWY-7342	superpathway of nicotine biosynthesis
RU84_RS14990	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS15030	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RU84_RS15030	PWY-5723	Rubisco shunt
RU84_RS15040	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RU84_RS15055	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RU84_RS15055	PWY-5368	dimorphecolate biosynthesis
RU84_RS15055	PWY-5995	linoleate biosynthesis I (plants)
RU84_RS15055	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RU84_RS15055	PWY-6803	phosphatidylcholine acyl editing
RU84_RS15055	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RU84_RS15055	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RU84_RS15055	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RU84_RS15055	PWY-7470	phosphatidylcholine biosynthesis VII
RU84_RS15055	PWY-7618	ricinoleate biosynthesis
RU84_RS15110	PWY-5958	acridone alkaloid biosynthesis
RU84_RS15110	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RU84_RS15110	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RU84_RS15130	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS15130	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS15240	PWY-3341	L-proline biosynthesis III
RU84_RS15240	PWY-4981	L-proline biosynthesis II (from arginine)
RU84_RS15240	PWY-6344	L-ornithine degradation II (Stickland reaction)
RU84_RS15250	PWY-4381	fatty acid biosynthesis initiation I
RU84_RS15250	PWY-5743	3-hydroxypropanoate cycle
RU84_RS15250	PWY-5744	glyoxylate assimilation
RU84_RS15250	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS15250	PWY-6679	jadomycin biosynthesis
RU84_RS15250	PWY-6722	candicidin biosynthesis
RU84_RS15250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RU84_RS15265	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS15365	PWY-6654	phosphopantothenate biosynthesis III
RU84_RS15370	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RU84_RS15370	PWY-6148	tetrahydromethanopterin biosynthesis
RU84_RS15370	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RU84_RS15370	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RU84_RS15410	PWY-6936	seleno-amino acid biosynthesis
RU84_RS15525	PWY-4202	arsenate detoxification I (glutaredoxin)
RU84_RS15525	PWY-4621	arsenate detoxification II (glutaredoxin)
RU84_RS15740	PWY-5103	L-isoleucine biosynthesis III
RU84_RS15740	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RU84_RS15745	PWY-5101	L-isoleucine biosynthesis II
RU84_RS15745	PWY-5103	L-isoleucine biosynthesis III
RU84_RS15745	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS15745	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RU84_RS15745	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RU84_RS15745	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RU84_RS15745	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RU84_RS15750	PWY-5101	L-isoleucine biosynthesis II
RU84_RS15750	PWY-5103	L-isoleucine biosynthesis III
RU84_RS15750	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS15750	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RU84_RS15750	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RU84_RS15750	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RU84_RS15750	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RU84_RS15790	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RU84_RS15790	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RU84_RS15790	PWY-5989	stearate biosynthesis II (bacteria and plants)
RU84_RS15790	PWY-6113	superpathway of mycolate biosynthesis
RU84_RS15790	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RU84_RS15790	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RU84_RS15790	PWY-7663	gondoate biosynthesis (anaerobic)
RU84_RS15790	PWY-7664	oleate biosynthesis IV (anaerobic)
RU84_RS15790	PWYG-321	mycolate biosynthesis
RU84_RS15825	PWY-6012	acyl carrier protein metabolism I
RU84_RS15825	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RU84_RS15865	PWY-2201	folate transformations I
RU84_RS15870	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RU84_RS15870	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RU84_RS15870	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS15870	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS15870	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RU84_RS15870	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RU84_RS15870	PWY-7205	CMP phosphorylation
RU84_RS15870	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RU84_RS15870	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS15870	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS15870	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS15870	PWY-7224	purine deoxyribonucleosides salvage
RU84_RS15870	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS15870	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RU84_RS15895	PWY-6902	chitin degradation II
RU84_RS15910	PWY-3341	L-proline biosynthesis III
RU84_RS15910	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RU84_RS15920	PWY-5530	sorbitol biosynthesis II
RU84_RS15920	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RU84_RS15930	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RU84_RS15930	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
RU84_RS15930	PWY-7242	D-fructuronate degradation
RU84_RS15930	PWY-7310	D-glucosaminate degradation
RU84_RS15930	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
RU84_RS15935	PWY-5101	L-isoleucine biosynthesis II
RU84_RS15935	PWY-5103	L-isoleucine biosynthesis III
RU84_RS15935	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS15935	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RU84_RS15940	PWY-5482	pyruvate fermentation to acetate II
RU84_RS15940	PWY-5485	pyruvate fermentation to acetate IV
RU84_RS15940	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS15945	PWY-1281	sulfoacetaldehyde degradation I
RU84_RS15945	PWY-5482	pyruvate fermentation to acetate II
RU84_RS15945	PWY-5485	pyruvate fermentation to acetate IV
RU84_RS15945	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS15945	PWY-6637	sulfolactate degradation II
RU84_RS15950	PWY-5392	reductive TCA cycle II
RU84_RS15950	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RU84_RS15950	PWY-5690	TCA cycle II (plants and fungi)
RU84_RS15950	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS15950	PWY-6728	methylaspartate cycle
RU84_RS15950	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RU84_RS15950	PWY-7254	TCA cycle VII (acetate-producers)
RU84_RS15950	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RU84_RS15990	PWY-6871	3-methylbutanol biosynthesis
RU84_RS15995	PWY-5344	L-homocysteine biosynthesis
RU84_RS16010	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RU84_RS16065	PWY-3841	folate transformations II
RU84_RS16065	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RU84_RS16065	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RU84_RS16065	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RU84_RS16065	PWY-7199	pyrimidine deoxyribonucleosides salvage
RU84_RS16065	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RU84_RS16070	PWY-3841	folate transformations II
RU84_RS16070	PWY-6614	tetrahydrofolate biosynthesis
RU84_RS16100	PWY-2201	folate transformations I
RU84_RS16100	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS16220	PWY-2941	L-lysine biosynthesis II
RU84_RS16220	PWY-2942	L-lysine biosynthesis III
RU84_RS16220	PWY-5097	L-lysine biosynthesis VI
RU84_RS16220	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS16220	PWY-6559	spermidine biosynthesis II
RU84_RS16220	PWY-6562	norspermidine biosynthesis
RU84_RS16220	PWY-7153	grixazone biosynthesis
RU84_RS16220	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS16265	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RU84_RS16310	PWY-5506	methanol oxidation to formaldehyde IV
RU84_RS16475	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RU84_RS16510	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS16510	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS16645	PWY-5839	menaquinol-7 biosynthesis
RU84_RS16645	PWY-5844	menaquinol-9 biosynthesis
RU84_RS16645	PWY-5849	menaquinol-6 biosynthesis
RU84_RS16645	PWY-5890	menaquinol-10 biosynthesis
RU84_RS16645	PWY-5891	menaquinol-11 biosynthesis
RU84_RS16645	PWY-5892	menaquinol-12 biosynthesis
RU84_RS16645	PWY-5895	menaquinol-13 biosynthesis
RU84_RS16755	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS16755	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS16755	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS16755	PWY-7003	glycerol degradation to butanol
RU84_RS16845	PWY-5269	cardiolipin biosynthesis II
RU84_RS16845	PWY-5668	cardiolipin biosynthesis I
RU84_RS16870	PWY-1361	benzoyl-CoA degradation I (aerobic)
RU84_RS16870	PWY-5109	2-methylbutanoate biosynthesis
RU84_RS16870	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RU84_RS16870	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
RU84_RS16870	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RU84_RS16870	PWY-5177	glutaryl-CoA degradation
RU84_RS16870	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RU84_RS16870	PWY-6435	4-hydroxybenzoate biosynthesis V
RU84_RS16870	PWY-6583	pyruvate fermentation to butanol I
RU84_RS16870	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
RU84_RS16870	PWY-6863	pyruvate fermentation to hexanol
RU84_RS16870	PWY-6883	pyruvate fermentation to butanol II
RU84_RS16870	PWY-6944	androstenedione degradation
RU84_RS16870	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RU84_RS16870	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RU84_RS16870	PWY-7007	methyl ketone biosynthesis
RU84_RS16870	PWY-7046	4-coumarate degradation (anaerobic)
RU84_RS16870	PWY-7094	fatty acid salvage
RU84_RS16870	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RU84_RS16870	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
RU84_RS16870	PWY-735	jasmonic acid biosynthesis
RU84_RS16870	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RU84_RS16870	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RU84_RS16870	PWY-7726	RU84_RS16870
RU84_RS16875	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RU84_RS16875	PWY-6435	4-hydroxybenzoate biosynthesis V
RU84_RS16875	PWY-6863	pyruvate fermentation to hexanol
RU84_RS16875	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RU84_RS16875	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RU84_RS16875	PWY-6948	sitosterol degradation to androstenedione
RU84_RS16875	PWY-7094	fatty acid salvage
RU84_RS16875	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RU84_RS16875	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
RU84_RS16875	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
RU84_RS16875	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
RU84_RS16875	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
RU84_RS16875	PWY-735	jasmonic acid biosynthesis
RU84_RS16875	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RU84_RS16875	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
RU84_RS16875	PWY-7726	RU84_RS16875
RU84_RS17025	PWY-5958	acridone alkaloid biosynthesis
RU84_RS17025	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RU84_RS17025	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RU84_RS17030	PWY-181	photorespiration
RU84_RS17075	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RU84_RS17075	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RU84_RS17080	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RU84_RS17080	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RU84_RS17095	PWY-4983	L-citrulline-nitric oxide cycle
RU84_RS17095	PWY-4984	urea cycle
RU84_RS17095	PWY-5	canavanine biosynthesis
RU84_RS17095	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS17095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RU84_RS17130	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RU84_RS17160	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RU84_RS17160	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RU84_RS17225	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS17225	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RU84_RS17225	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS17225	PWY-5723	Rubisco shunt
RU84_RS17225	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS17225	PWY-6886	1-butanol autotrophic biosynthesis
RU84_RS17225	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS17225	PWY-7003	glycerol degradation to butanol
RU84_RS17225	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS17225	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RU84_RS17260	PWY-6167	flavin biosynthesis II (archaea)
RU84_RS17260	PWY-6168	flavin biosynthesis III (fungi)
RU84_RS17260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS17270	PWY-5525	D-glucuronate degradation I
RU84_RS17430	PWY-6936	seleno-amino acid biosynthesis
RU84_RS17545	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS17555	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS17660	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RU84_RS17715	PWY-6012	acyl carrier protein metabolism I
RU84_RS17715	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RU84_RS17765	PWY-6157	autoinducer AI-1 biosynthesis
RU84_RS17800	PWY-5642	2,4-dinitrotoluene degradation
RU84_RS17800	PWY-6373	acrylate degradation
RU84_RS17825	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS17915	PWY-5747	2-methylcitrate cycle II
RU84_RS17925	PWY-5913	TCA cycle VI (obligate autotrophs)
RU84_RS17925	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RU84_RS17925	PWY-6638	sulfolactate degradation III
RU84_RS17925	PWY-6642	(<i>R</i>)-cysteate degradation
RU84_RS17925	PWY-6643	coenzyme M biosynthesis II
RU84_RS17925	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RU84_RS17925	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RU84_RS17925	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RU84_RS17930	PWY-6454	vancomycin resistance I
RU84_RS17930	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS17950	PWY-6749	CMP-legionaminate biosynthesis I
RU84_RS17955	PWY-3821	galactose degradation III
RU84_RS17955	PWY-6317	galactose degradation I (Leloir pathway)
RU84_RS17955	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RU84_RS17955	PWY-6527	stachyose degradation
RU84_RS17955	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RU84_RS17955	PWY-7344	UDP-D-galactose biosynthesis
RU84_RS17960	PWY-3801	sucrose degradation II (sucrose synthase)
RU84_RS17960	PWY-5054	sorbitol biosynthesis I
RU84_RS17960	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RU84_RS17960	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RU84_RS17960	PWY-5659	GDP-mannose biosynthesis
RU84_RS17960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS17960	PWY-621	sucrose degradation III (sucrose invertase)
RU84_RS17960	PWY-622	starch biosynthesis
RU84_RS17960	PWY-6981	chitin biosynthesis
RU84_RS17960	PWY-6992	1,5-anhydrofructose degradation
RU84_RS17960	PWY-7238	sucrose biosynthesis II
RU84_RS17960	PWY-7347	sucrose biosynthesis III
RU84_RS17960	PWY-7385	1,3-propanediol biosynthesis (engineered)
RU84_RS17965	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RU84_RS17970	PWY-3801	sucrose degradation II (sucrose synthase)
RU84_RS17970	PWY-6527	stachyose degradation
RU84_RS17970	PWY-7238	sucrose biosynthesis II
RU84_RS17970	PWY-7343	UDP-glucose biosynthesis
RU84_RS18005	PWY-6143	CMP-pseudaminate biosynthesis
RU84_RS18020	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RU84_RS18020	PWY-6143	CMP-pseudaminate biosynthesis
RU84_RS18030	PWY-1042	glycolysis IV (plant cytosol)
RU84_RS18030	PWY-1622	formaldehyde assimilation I (serine pathway)
RU84_RS18030	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RU84_RS18030	PWY-5484	glycolysis II (from fructose 6-phosphate)
RU84_RS18030	PWY-5723	Rubisco shunt
RU84_RS18030	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RU84_RS18030	PWY-6143	CMP-pseudaminate biosynthesis
RU84_RS18030	PWY-6886	1-butanol autotrophic biosynthesis
RU84_RS18030	PWY-6901	superpathway of glucose and xylose degradation
RU84_RS18030	PWY-7003	glycerol degradation to butanol
RU84_RS18030	PWY-7124	ethylene biosynthesis V (engineered)
RU84_RS18030	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RU84_RS18030	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
RU84_RS18030	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
RU84_RS18030	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
RU84_RS18030	PWY-7719	RU84_RS18030
RU84_RS18075	PWY-5316	nicotine biosynthesis
RU84_RS18075	PWY-5381	pyridine nucleotide cycling (plants)
RU84_RS18075	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RU84_RS18075	PWY-7342	superpathway of nicotine biosynthesis
RU84_RS18120	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RU84_RS18120	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RU84_RS18120	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RU84_RS18120	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RU84_RS18120	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RU84_RS18120	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RU84_RS18120	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RU84_RS18120	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RU84_RS18120	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RU84_RS18120	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RU84_RS18145	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RU84_RS18190	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RU84_RS18190	PWY-6167	flavin biosynthesis II (archaea)
RU84_RS18190	PWY-6168	flavin biosynthesis III (fungi)
RU84_RS18310	PWY-6123	inosine-5'-phosphate biosynthesis I
RU84_RS18310	PWY-7234	inosine-5'-phosphate biosynthesis III
RU84_RS18360	PWY-5497	purine nucleobases degradation II (anaerobic)
RU84_RS18360	PWY-6606	guanosine nucleotides degradation II
RU84_RS18360	PWY-6608	guanosine nucleotides degradation III
RU84_RS18360	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RU84_RS18370	PWY-6599	guanine and guanosine salvage II
RU84_RS18370	PWY-6609	adenine and adenosine salvage III
RU84_RS18370	PWY-6610	adenine and adenosine salvage IV
RU84_RS18370	PWY-6620	guanine and guanosine salvage
RU84_RS18930	PWY-5028	L-histidine degradation II
RU84_RS18930	PWY-5030	L-histidine degradation III
RU84_RS19240	PWY-5101	L-isoleucine biosynthesis II
RU84_RS19240	PWY-5103	L-isoleucine biosynthesis III
RU84_RS19240	PWY-5104	L-isoleucine biosynthesis IV
RU84_RS19240	PWY-7111	pyruvate fermentation to isobutanol (engineered)
