A388_RS00120	PWY-6599	guanine and guanosine salvage II
A388_RS00120	PWY-6609	adenine and adenosine salvage III
A388_RS00120	PWY-6610	adenine and adenosine salvage IV
A388_RS00120	PWY-6620	guanine and guanosine salvage
A388_RS00125	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS00125	PWY-6606	guanosine nucleotides degradation II
A388_RS00125	PWY-6608	guanosine nucleotides degradation III
A388_RS00125	PWY-7442	drosopterin and aurodrosopterin biosynthesis
A388_RS00175	PWY-6123	inosine-5'-phosphate biosynthesis I
A388_RS00175	PWY-7234	inosine-5'-phosphate biosynthesis III
A388_RS00295	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
A388_RS00295	PWY-6167	flavin biosynthesis II (archaea)
A388_RS00295	PWY-6168	flavin biosynthesis III (fungi)
A388_RS00295	PWY-7863	A388_RS00295
A388_RS00340	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS00365	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
A388_RS00365	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
A388_RS00365	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
A388_RS00365	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
A388_RS00365	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
A388_RS00365	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
A388_RS00365	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
A388_RS00365	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
A388_RS00365	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
A388_RS00365	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
A388_RS00405	PWY-7782	A388_RS00405
A388_RS00405	PWY-7783	A388_RS00405
A388_RS00415	PWY-5316	nicotine biosynthesis
A388_RS00415	PWY-5381	pyridine nucleotide cycling (plants)
A388_RS00415	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
A388_RS00415	PWY-7342	superpathway of nicotine biosynthesis
A388_RS00485	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
A388_RS00485	PWY-7820	A388_RS00485
A388_RS00515	PWY-3801	sucrose degradation II (sucrose synthase)
A388_RS00515	PWY-6527	stachyose degradation
A388_RS00515	PWY-7238	sucrose biosynthesis II
A388_RS00515	PWY-7343	UDP-glucose biosynthesis
A388_RS00515	PWY-7817	A388_RS00515
A388_RS00520	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
A388_RS00520	PWY-7820	A388_RS00520
A388_RS00525	PWY-3801	sucrose degradation II (sucrose synthase)
A388_RS00525	PWY-5054	sorbitol biosynthesis I
A388_RS00525	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
A388_RS00525	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A388_RS00525	PWY-5659	GDP-mannose biosynthesis
A388_RS00525	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS00525	PWY-621	sucrose degradation III (sucrose invertase)
A388_RS00525	PWY-622	starch biosynthesis
A388_RS00525	PWY-6981	chitin biosynthesis
A388_RS00525	PWY-6992	1,5-anhydrofructose degradation
A388_RS00525	PWY-7238	sucrose biosynthesis II
A388_RS00525	PWY-7347	sucrose biosynthesis III
A388_RS00525	PWY-7385	1,3-propanediol biosynthesis (engineered)
A388_RS00530	PWY-3821	galactose degradation III
A388_RS00530	PWY-6317	galactose degradation I (Leloir pathway)
A388_RS00530	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
A388_RS00530	PWY-6527	stachyose degradation
A388_RS00530	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
A388_RS00530	PWY-7344	UDP-D-galactose biosynthesis
A388_RS00550	PWY-6749	CMP-legionaminate biosynthesis I
A388_RS00570	PWY-6454	vancomycin resistance I
A388_RS00570	PWY-6901	superpathway of glucose and xylose degradation
A388_RS00575	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS00575	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
A388_RS00575	PWY-6638	sulfolactate degradation III
A388_RS00575	PWY-6642	(<i>R</i>)-cysteate degradation
A388_RS00575	PWY-6643	coenzyme M biosynthesis II
A388_RS00575	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A388_RS00575	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A388_RS00575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A388_RS00590	PWY-5747	2-methylcitrate cycle II
A388_RS00680	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A388_RS00705	PWY-5642	2,4-dinitrotoluene degradation
A388_RS00705	PWY-6373	acrylate degradation
A388_RS00750	PWY-6012	acyl carrier protein metabolism I
A388_RS00750	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
A388_RS00805	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS00910	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS00920	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS01035	PWY-6936	seleno-amino acid biosynthesis
A388_RS01140	PWY-7805	A388_RS01140
A388_RS01140	PWY-7807	A388_RS01140
A388_RS01230	PWY-4202	arsenate detoxification I (glutaredoxin)
A388_RS01230	PWY-4621	arsenate detoxification II (glutaredoxin)
A388_RS01295	PWY-6614	tetrahydrofolate biosynthesis
A388_RS01485	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS01640	PWY-702	L-methionine biosynthesis II
A388_RS01735	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A388_RS01735	PWY-5743	3-hydroxypropanoate cycle
A388_RS01735	PWY-5744	glyoxylate assimilation
A388_RS01735	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A388_RS01735	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS01735	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A388_RS01735	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A388_RS01830	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A388_RS01845	PWY-2201	folate transformations I
A388_RS01865	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS01865	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS01870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A388_RS01870	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A388_RS01870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A388_RS01915	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A388_RS01920	PWY-6164	3-dehydroquinate biosynthesis I
A388_RS01995	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS02000	PWY-7560	methylerythritol phosphate pathway II
A388_RS02050	PWY-6829	tRNA methylation (yeast)
A388_RS02050	PWY-7285	methylwyosine biosynthesis
A388_RS02050	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
A388_RS02135	PWY-6854	ethylene biosynthesis III (microbes)
A388_RS02310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A388_RS02315	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
A388_RS02320	PWY-6168	flavin biosynthesis III (fungi)
A388_RS02320	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A388_RS02325	PWY-6891	thiazole biosynthesis II (Bacillus)
A388_RS02325	PWY-6892	thiazole biosynthesis I (E. coli)
A388_RS02325	PWY-7560	methylerythritol phosphate pathway II
A388_RS02330	PWY-2301	<i>myo</i>-inositol biosynthesis
A388_RS02330	PWY-4702	phytate degradation I
A388_RS02330	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
A388_RS02400	PWY-5667	CDP-diacylglycerol biosynthesis I
A388_RS02400	PWY-6453	stigma estolide biosynthesis
A388_RS02400	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
A388_RS02400	PWY-7587	oleate biosynthesis III (cyanobacteria)
A388_RS02710	PWY-7731	A388_RS02710
A388_RS02760	PWY-1622	formaldehyde assimilation I (serine pathway)
A388_RS02760	PWY-5392	reductive TCA cycle II
A388_RS02760	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A388_RS02760	PWY-5690	TCA cycle II (plants and fungi)
A388_RS02760	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS02760	PWY-6728	methylaspartate cycle
A388_RS02760	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS02760	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A388_RS02760	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A388_RS02785	PWY-5669	phosphatidylethanolamine biosynthesis I
A388_RS02820	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS02850	PWY-6679	jadomycin biosynthesis
A388_RS02850	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS02895	PWY-7294	xylose degradation IV
A388_RS02895	PWY-7295	L-arabinose degradation IV
A388_RS03065	PWY-7851	A388_RS03065
A388_RS03085	PWY-6700	queuosine biosynthesis
A388_RS03100	PWY-6700	queuosine biosynthesis
A388_RS03345	PWY-5057	L-valine degradation II
A388_RS03345	PWY-5076	L-leucine degradation III
A388_RS03345	PWY-5078	L-isoleucine degradation II
A388_RS03345	PWY-5101	L-isoleucine biosynthesis II
A388_RS03345	PWY-5103	L-isoleucine biosynthesis III
A388_RS03345	PWY-5104	L-isoleucine biosynthesis IV
A388_RS03345	PWY-5108	L-isoleucine biosynthesis V
A388_RS03345	PWY-7767	A388_RS03345
A388_RS03465	PWY-5987	sorgoleone biosynthesis
A388_RS03465	PWY-5996	oleate biosynthesis II (animals and fungi)
A388_RS03480	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
A388_RS03480	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A388_RS03480	PWY-6268	adenosylcobalamin salvage from cobalamin
A388_RS03480	PWY-6269	adenosylcobalamin salvage from cobinamide II
A388_RS03525	PWY-6679	jadomycin biosynthesis
A388_RS03525	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS03530	PWY-2161	folate polyglutamylation
A388_RS03595	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS03595	PWY-5109	2-methylbutanoate biosynthesis
A388_RS03595	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
A388_RS03595	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
A388_RS03595	PWY-5177	glutaryl-CoA degradation
A388_RS03595	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A388_RS03595	PWY-6435	4-hydroxybenzoate biosynthesis V
A388_RS03595	PWY-6583	pyruvate fermentation to butanol I
A388_RS03595	PWY-6863	pyruvate fermentation to hexanol
A388_RS03595	PWY-6883	pyruvate fermentation to butanol II
A388_RS03595	PWY-6944	androstenedione degradation
A388_RS03595	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
A388_RS03595	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
A388_RS03595	PWY-7007	methyl ketone biosynthesis
A388_RS03595	PWY-7046	4-coumarate degradation (anaerobic)
A388_RS03595	PWY-7094	fatty acid salvage
A388_RS03595	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
A388_RS03595	PWY-735	jasmonic acid biosynthesis
A388_RS03595	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
A388_RS03595	PWY-7606	docosahexaenoate biosynthesis III (mammals)
A388_RS03595	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
A388_RS03595	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
A388_RS03595	PWY-7726	A388_RS03595
A388_RS03595	PWY-7778	A388_RS03595
A388_RS03595	PWY-7779	A388_RS03595
A388_RS03595	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
A388_RS03625	PWY-6683	sulfate reduction III (assimilatory)
A388_RS03670	PWY-6825	phosphatidylcholine biosynthesis V
A388_RS03960	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A388_RS04040	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
A388_RS04620	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
A388_RS04625	PWY-5194	siroheme biosynthesis
A388_RS04625	PWY-5196	factor 430 biosynthesis
A388_RS04625	PWY-5441	S-methyl-L-methionine cycle
A388_RS04625	PWY-702	L-methionine biosynthesis II
A388_RS04625	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
A388_RS04630	PWY-6004	glycine betaine biosynthesis V (from glycine)
A388_RS04660	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A388_RS04660	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A388_RS04710	PWY-3781	aerobic respiration I (cytochrome c)
A388_RS04710	PWY-4302	aerobic respiration III (alternative oxidase pathway)
A388_RS04710	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A388_RS04710	PWY-5690	TCA cycle II (plants and fungi)
A388_RS04710	PWY-6728	methylaspartate cycle
A388_RS04710	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS04710	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS04710	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A388_RS04715	PWY-3781	aerobic respiration I (cytochrome c)
A388_RS04715	PWY-4302	aerobic respiration III (alternative oxidase pathway)
A388_RS04715	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A388_RS04715	PWY-5690	TCA cycle II (plants and fungi)
A388_RS04715	PWY-6728	methylaspartate cycle
A388_RS04715	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS04715	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS04715	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A388_RS04730	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A388_RS04735	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A388_RS04740	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
A388_RS04740	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A388_RS04745	PWY-5392	reductive TCA cycle II
A388_RS04745	PWY-5537	pyruvate fermentation to acetate V
A388_RS04745	PWY-5538	pyruvate fermentation to acetate VI
A388_RS04745	PWY-5690	TCA cycle II (plants and fungi)
A388_RS04745	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS04745	PWY-6728	methylaspartate cycle
A388_RS04745	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS04745	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A388_RS04750	PWY-5392	reductive TCA cycle II
A388_RS04750	PWY-5537	pyruvate fermentation to acetate V
A388_RS04750	PWY-5538	pyruvate fermentation to acetate VI
A388_RS04750	PWY-5690	TCA cycle II (plants and fungi)
A388_RS04750	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS04750	PWY-6728	methylaspartate cycle
A388_RS04750	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS04750	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A388_RS04830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS04830	PWY-5686	UMP biosynthesis
A388_RS04830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS04830	PWY-7790	A388_RS04830
A388_RS04830	PWY-7791	A388_RS04830
A388_RS04835	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS04835	PWY-5686	UMP biosynthesis
A388_RS04835	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS04835	PWY-7790	A388_RS04835
A388_RS04835	PWY-7791	A388_RS04835
A388_RS04865	PWY-6614	tetrahydrofolate biosynthesis
A388_RS04900	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
A388_RS04900	PWY-2201	folate transformations I
A388_RS04900	PWY-3841	folate transformations II
A388_RS04900	PWY-5030	L-histidine degradation III
A388_RS04900	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS04900	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
A388_RS04920	PWY-4261	glycerol degradation I
A388_RS04925	PWY-4261	glycerol degradation I
A388_RS04925	PWY-6118	glycerol-3-phosphate shuttle
A388_RS04925	PWY-6952	glycerophosphodiester degradation
A388_RS04930	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A388_RS04960	PWY-7039	phosphatidate metabolism, as a signaling molecule
A388_RS04960	PWY-7817	A388_RS04960
A388_RS05025	PWY-2582	brassinosteroid biosynthesis II
A388_RS05025	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
A388_RS05025	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
A388_RS05025	PWY-6948	sitosterol degradation to androstenedione
A388_RS05025	PWY-699	brassinosteroid biosynthesis I
A388_RS05025	PWY-7299	progesterone biosynthesis
A388_RS05110	PWY-181	photorespiration
A388_RS05140	PWY-2941	L-lysine biosynthesis II
A388_RS05140	PWY-2942	L-lysine biosynthesis III
A388_RS05140	PWY-5097	L-lysine biosynthesis VI
A388_RS05145	PWY-2941	L-lysine biosynthesis II
A388_RS05145	PWY-5097	L-lysine biosynthesis VI
A388_RS05270	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A388_RS05270	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
A388_RS05275	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A388_RS05275	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A388_RS05275	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A388_RS05320	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS05380	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A388_RS05380	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A388_RS05380	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A388_RS05415	PWY-6482	diphthamide biosynthesis (archaea)
A388_RS05415	PWY-7546	diphthamide biosynthesis (eukaryotes)
A388_RS05425	PWY-6703	preQ<sub>0</sub> biosynthesis
A388_RS05430	PWY-6703	preQ<sub>0</sub> biosynthesis
A388_RS05475	PWY-6543	4-aminobenzoate biosynthesis
A388_RS05485	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A388_RS05485	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS05485	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS05485	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
A388_RS05485	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A388_RS05485	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A388_RS05495	PWY-5316	nicotine biosynthesis
A388_RS05495	PWY-7342	superpathway of nicotine biosynthesis
A388_RS05580	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS05620	PWY-1042	glycolysis IV (plant cytosol)
A388_RS05620	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS05620	PWY-6901	superpathway of glucose and xylose degradation
A388_RS05620	PWY-7003	glycerol degradation to butanol
A388_RS05640	PWY-3341	L-proline biosynthesis III
A388_RS05640	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A388_RS05660	PWY-723	alkylnitronates degradation
A388_RS05720	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A388_RS05720	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A388_RS05730	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS05730	PWY-6549	L-glutamine biosynthesis III
A388_RS05730	PWY-6728	methylaspartate cycle
A388_RS05730	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS05730	PWY-7124	ethylene biosynthesis V (engineered)
A388_RS05730	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS05730	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A388_RS05740	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS05740	PWY-6549	L-glutamine biosynthesis III
A388_RS05740	PWY-6728	methylaspartate cycle
A388_RS05740	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS05740	PWY-7124	ethylene biosynthesis V (engineered)
A388_RS05740	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS05740	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A388_RS05835	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A388_RS05835	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A388_RS05835	PWY-6897	thiamin salvage II
A388_RS05835	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A388_RS05835	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A388_RS05835	PWY-7356	thiamin salvage IV (yeast)
A388_RS05835	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A388_RS05840	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A388_RS05895	PWY-6409	pyoverdine I biosynthesis
A388_RS05895	PWY-6562	norspermidine biosynthesis
A388_RS05895	PWY-761	rhizobactin 1021 biosynthesis
A388_RS05895	PWY-7855	A388_RS05895
A388_RS05960	PWY-6123	inosine-5'-phosphate biosynthesis I
A388_RS05960	PWY-6124	inosine-5'-phosphate biosynthesis II
A388_RS05960	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS05960	PWY-7234	inosine-5'-phosphate biosynthesis III
A388_RS05985	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A388_RS05985	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A388_RS06000	PWY-5381	pyridine nucleotide cycling (plants)
A388_RS06000	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A388_RS06000	PWY-6596	adenosine nucleotides degradation I
A388_RS06000	PWY-6606	guanosine nucleotides degradation II
A388_RS06000	PWY-6607	guanosine nucleotides degradation I
A388_RS06000	PWY-6608	guanosine nucleotides degradation III
A388_RS06000	PWY-7185	UTP and CTP dephosphorylation I
A388_RS06000	PWY-7821	A388_RS06000
A388_RS06025	PWY-5386	methylglyoxal degradation I
A388_RS06240	PWY-5901	2,3-dihydroxybenzoate biosynthesis
A388_RS06245	PWY-6173	histamine biosynthesis
A388_RS06270	PWY-6012	acyl carrier protein metabolism I
A388_RS06270	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
A388_RS06275	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
A388_RS06275	PWY-5901	2,3-dihydroxybenzoate biosynthesis
A388_RS06275	PWY-6406	salicylate biosynthesis I
A388_RS06285	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
A388_RS06285	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
A388_RS06285	PWY-7766	A388_RS06285
A388_RS06315	PWY-5663	tetrahydrobiopterin biosynthesis I
A388_RS06315	PWY-5664	tetrahydrobiopterin biosynthesis II
A388_RS06315	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A388_RS06315	PWY-6703	preQ<sub>0</sub> biosynthesis
A388_RS06315	PWY-6983	tetrahydrobiopterin biosynthesis III
A388_RS06315	PWY-7442	drosopterin and aurodrosopterin biosynthesis
A388_RS06315	PWY-7852	A388_RS06315
A388_RS06320	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS06320	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A388_RS06320	PWY-6538	caffeine degradation III (bacteria, via demethylation)
A388_RS06320	PWY-6596	adenosine nucleotides degradation I
A388_RS06320	PWY-6606	guanosine nucleotides degradation II
A388_RS06320	PWY-6607	guanosine nucleotides degradation I
A388_RS06320	PWY-6608	guanosine nucleotides degradation III
A388_RS06320	PWY-6999	theophylline degradation
A388_RS06325	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS06325	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A388_RS06325	PWY-6538	caffeine degradation III (bacteria, via demethylation)
A388_RS06325	PWY-6596	adenosine nucleotides degradation I
A388_RS06325	PWY-6606	guanosine nucleotides degradation II
A388_RS06325	PWY-6607	guanosine nucleotides degradation I
A388_RS06325	PWY-6608	guanosine nucleotides degradation III
A388_RS06325	PWY-6999	theophylline degradation
A388_RS06360	PWY-5958	acridone alkaloid biosynthesis
A388_RS06360	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A388_RS06360	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A388_RS06375	PWY-381	nitrate reduction II (assimilatory)
A388_RS06375	PWY-5675	nitrate reduction V (assimilatory)
A388_RS06375	PWY-6549	L-glutamine biosynthesis III
A388_RS06375	PWY-6963	ammonia assimilation cycle I
A388_RS06375	PWY-6964	ammonia assimilation cycle II
A388_RS06380	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
A388_RS06380	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
A388_RS06380	PWY-6148	tetrahydromethanopterin biosynthesis
A388_RS06380	PWY-7742	A388_RS06380
A388_RS06380	PWY-7745	A388_RS06380
A388_RS06390	PWY-6857	retinol biosynthesis
A388_RS06420	PWY-6854	ethylene biosynthesis III (microbes)
A388_RS06440	PWY-1281	sulfoacetaldehyde degradation I
A388_RS06440	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A388_RS06440	PWY-5482	pyruvate fermentation to acetate II
A388_RS06440	PWY-5485	pyruvate fermentation to acetate IV
A388_RS06440	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS06440	PWY-6637	sulfolactate degradation II
A388_RS06440	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A388_RS06450	PWY-2201	folate transformations I
A388_RS06455	PWY-2201	folate transformations I
A388_RS06455	PWY-3841	folate transformations II
A388_RS06460	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A388_RS06480	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A388_RS06480	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A388_RS06505	PWY-7799	A388_RS06505
A388_RS06505	PWY-7800	A388_RS06505
A388_RS06565	PWY-6700	queuosine biosynthesis
A388_RS06985	PWY-6857	retinol biosynthesis
A388_RS06995	PWY-1622	formaldehyde assimilation I (serine pathway)
A388_RS06995	PWY-181	photorespiration
A388_RS06995	PWY-2161	folate polyglutamylation
A388_RS06995	PWY-2201	folate transformations I
A388_RS06995	PWY-3661	glycine betaine degradation I
A388_RS06995	PWY-3661-1	glycine betaine degradation II (mammalian)
A388_RS06995	PWY-3841	folate transformations II
A388_RS06995	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS07105	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A388_RS07105	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A388_RS07105	PWY-6897	thiamin salvage II
A388_RS07105	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A388_RS07105	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A388_RS07105	PWY-7356	thiamin salvage IV (yeast)
A388_RS07105	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A388_RS07115	PWY-1001	cellulose biosynthesis
A388_RS07115	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A388_RS07115	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A388_RS07115	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A388_RS07115	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A388_RS07120	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
A388_RS07120	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A388_RS07120	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
A388_RS07155	PWY-3461	L-tyrosine biosynthesis II
A388_RS07155	PWY-3462	L-phenylalanine biosynthesis II
A388_RS07155	PWY-6120	L-tyrosine biosynthesis III
A388_RS07155	PWY-6627	salinosporamide A biosynthesis
A388_RS07155	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
A388_RS07155	PWY-7626	bacilysin biosynthesis
A388_RS07160	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A388_RS07160	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
A388_RS07190	PWY-6891	thiazole biosynthesis II (Bacillus)
A388_RS07190	PWY-6892	thiazole biosynthesis I (E. coli)
A388_RS07235	PWY-5667	CDP-diacylglycerol biosynthesis I
A388_RS07235	PWY-5981	CDP-diacylglycerol biosynthesis III
A388_RS07255	PWY-5686	UMP biosynthesis
A388_RS07265	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A388_RS07265	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A388_RS07265	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A388_RS07265	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
A388_RS07300	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
A388_RS07300	PWY-5368	dimorphecolate biosynthesis
A388_RS07300	PWY-5995	linoleate biosynthesis I (plants)
A388_RS07300	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
A388_RS07300	PWY-6803	phosphatidylcholine acyl editing
A388_RS07300	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
A388_RS07300	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
A388_RS07300	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
A388_RS07300	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
A388_RS07300	PWY-7470	phosphatidylcholine biosynthesis VII
A388_RS07300	PWY-7618	ricinoleate biosynthesis
A388_RS07385	PWY-5691	urate degradation to allantoin I
A388_RS07385	PWY-7394	urate degradation to allantoin II
A388_RS07385	PWY-7849	A388_RS07385
A388_RS07465	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS07465	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS07505	PWY-5386	methylglyoxal degradation I
A388_RS07525	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A388_RS07525	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A388_RS07525	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A388_RS07530	PWY-6123	inosine-5'-phosphate biosynthesis I
A388_RS07530	PWY-6124	inosine-5'-phosphate biosynthesis II
A388_RS07530	PWY-7234	inosine-5'-phosphate biosynthesis III
A388_RS07585	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A388_RS07625	PWY-3781	aerobic respiration I (cytochrome c)
A388_RS07625	PWY-4521	arsenite oxidation I (respiratory)
A388_RS07625	PWY-6692	Fe(II) oxidation
A388_RS07625	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A388_RS07625	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
A388_RS07640	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS07760	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A388_RS07760	PWY-6148	tetrahydromethanopterin biosynthesis
A388_RS07760	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
A388_RS07760	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A388_RS07765	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A388_RS07765	PWY-6148	tetrahydromethanopterin biosynthesis
A388_RS07765	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
A388_RS07765	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A388_RS07765	PWY-7852	A388_RS07765
A388_RS07765	PWY-7853	A388_RS07765
A388_RS07795	PWY-381	nitrate reduction II (assimilatory)
A388_RS07795	PWY-5675	nitrate reduction V (assimilatory)
A388_RS07795	PWY-6549	L-glutamine biosynthesis III
A388_RS07795	PWY-6963	ammonia assimilation cycle I
A388_RS07795	PWY-6964	ammonia assimilation cycle II
A388_RS07835	PWY-5747	2-methylcitrate cycle II
A388_RS07910	PWY-2781	<i>cis</i>-zeatin biosynthesis
A388_RS07945	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A388_RS08000	PWY-6897	thiamin salvage II
A388_RS08000	PWY-7356	thiamin salvage IV (yeast)
A388_RS08000	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A388_RS08055	PWY-3461	L-tyrosine biosynthesis II
A388_RS08055	PWY-3462	L-phenylalanine biosynthesis II
A388_RS08055	PWY-6120	L-tyrosine biosynthesis III
A388_RS08055	PWY-6627	salinosporamide A biosynthesis
A388_RS08055	PWY-7626	bacilysin biosynthesis
A388_RS08210	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A388_RS08210	PWY-5723	Rubisco shunt
A388_RS08260	PWY-7782	A388_RS08260
A388_RS08260	PWY-7783	A388_RS08260
A388_RS08285	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS08285	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS08340	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A388_RS08340	PWY-6416	quinate degradation II
A388_RS08340	PWY-6707	gallate biosynthesis
A388_RS08370	PWY-6683	sulfate reduction III (assimilatory)
A388_RS08385	PWY-5964	guanylyl molybdenum cofactor biosynthesis
A388_RS08385	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
A388_RS08405	PWY-6823	molybdenum cofactor biosynthesis
A388_RS08415	PWY-6823	molybdenum cofactor biosynthesis
A388_RS08460	PWY-5392	reductive TCA cycle II
A388_RS08460	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A388_RS08460	PWY-5690	TCA cycle II (plants and fungi)
A388_RS08460	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS08460	PWY-6728	methylaspartate cycle
A388_RS08460	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS08460	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS08460	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A388_RS08495	PWY-7560	methylerythritol phosphate pathway II
A388_RS08505	PWY-4981	L-proline biosynthesis II (from arginine)
A388_RS08505	PWY-4984	urea cycle
A388_RS08505	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS08550	PWY-5667	CDP-diacylglycerol biosynthesis I
A388_RS08550	PWY-5981	CDP-diacylglycerol biosynthesis III
A388_RS08550	PWY-7817	A388_RS08550
A388_RS08555	PWY-7294	xylose degradation IV
A388_RS08555	PWY-7295	L-arabinose degradation IV
A388_RS08555	PWY-7560	methylerythritol phosphate pathway II
A388_RS08580	PWY-5971	palmitate biosynthesis II (bacteria and plants)
A388_RS08580	PWY-5973	<i>cis</i>-vaccenate biosynthesis
A388_RS08580	PWY-5989	stearate biosynthesis II (bacteria and plants)
A388_RS08580	PWY-5994	palmitate biosynthesis I (animals and fungi)
A388_RS08580	PWY-6113	superpathway of mycolate biosynthesis
A388_RS08580	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
A388_RS08580	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A388_RS08580	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS08580	PWY-7663	gondoate biosynthesis (anaerobic)
A388_RS08580	PWY-7664	oleate biosynthesis IV (anaerobic)
A388_RS08580	PWY-7858	A388_RS08580
A388_RS08580	PWYG-321	mycolate biosynthesis
A388_RS08645	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
A388_RS08645	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
A388_RS08680	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
A388_RS08750	PWY-7799	A388_RS08750
A388_RS08750	PWY-7800	A388_RS08750
A388_RS08820	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
A388_RS08870	PWY-6803	phosphatidylcholine acyl editing
A388_RS08870	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
A388_RS08870	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
A388_RS08870	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
A388_RS08870	PWY-7783	A388_RS08870
A388_RS08890	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A388_RS08890	PWY-5723	Rubisco shunt
A388_RS08905	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS08905	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS08930	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A388_RS08930	PWY-6164	3-dehydroquinate biosynthesis I
A388_RS08930	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A388_RS08975	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
A388_RS08975	PWY-7177	UTP and CTP dephosphorylation II
A388_RS08975	PWY-7185	UTP and CTP dephosphorylation I
A388_RS08980	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A388_RS08980	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A388_RS08985	PWY-1042	glycolysis IV (plant cytosol)
A388_RS08985	PWY-1622	formaldehyde assimilation I (serine pathway)
A388_RS08985	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A388_RS08985	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS08985	PWY-5723	Rubisco shunt
A388_RS08985	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS08985	PWY-6886	1-butanol autotrophic biosynthesis
A388_RS08985	PWY-6901	superpathway of glucose and xylose degradation
A388_RS08985	PWY-7003	glycerol degradation to butanol
A388_RS08985	PWY-7124	ethylene biosynthesis V (engineered)
A388_RS08985	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A388_RS09000	PWY-7560	methylerythritol phosphate pathway II
A388_RS09015	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS09015	PWY-2361	3-oxoadipate degradation
A388_RS09015	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
A388_RS09020	PWY-6123	inosine-5'-phosphate biosynthesis I
A388_RS09020	PWY-6124	inosine-5'-phosphate biosynthesis II
A388_RS09020	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS09020	PWY-7234	inosine-5'-phosphate biosynthesis III
A388_RS09025	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
A388_RS09050	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A388_RS09050	PWY-6416	quinate degradation II
A388_RS09050	PWY-6707	gallate biosynthesis
A388_RS09135	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A388_RS09205	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
A388_RS09210	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS09210	PWY-2361	3-oxoadipate degradation
A388_RS09210	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
A388_RS09235	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
A388_RS09240	PWY-1042	glycolysis IV (plant cytosol)
A388_RS09240	PWY-1622	formaldehyde assimilation I (serine pathway)
A388_RS09240	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A388_RS09240	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS09240	PWY-5723	Rubisco shunt
A388_RS09240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS09240	PWY-6886	1-butanol autotrophic biosynthesis
A388_RS09240	PWY-6901	superpathway of glucose and xylose degradation
A388_RS09240	PWY-7003	glycerol degradation to butanol
A388_RS09240	PWY-7124	ethylene biosynthesis V (engineered)
A388_RS09240	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A388_RS09260	PWY-5101	L-isoleucine biosynthesis II
A388_RS09260	PWY-5103	L-isoleucine biosynthesis III
A388_RS09260	PWY-5104	L-isoleucine biosynthesis IV
A388_RS09260	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS09280	PWY-5451	acetone degradation I (to methylglyoxal)
A388_RS09280	PWY-6588	pyruvate fermentation to acetone
A388_RS09280	PWY-6876	isopropanol biosynthesis
A388_RS09280	PWY-7466	acetone degradation III (to propane-1,2-diol)
A388_RS09345	PWY-5451	acetone degradation I (to methylglyoxal)
A388_RS09345	PWY-6588	pyruvate fermentation to acetone
A388_RS09345	PWY-6876	isopropanol biosynthesis
A388_RS09345	PWY-7466	acetone degradation III (to propane-1,2-diol)
A388_RS09385	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
A388_RS09540	PWY-5101	L-isoleucine biosynthesis II
A388_RS09540	PWY-5103	L-isoleucine biosynthesis III
A388_RS09540	PWY-5104	L-isoleucine biosynthesis IV
A388_RS09540	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS09585	PWY-5381	pyridine nucleotide cycling (plants)
A388_RS09595	PWY-2201	folate transformations I
A388_RS09595	PWY-3841	folate transformations II
A388_RS09605	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A388_RS09925	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS09925	PWY-3162	L-tryptophan degradation V (side chain pathway)
A388_RS09925	PWY-5057	L-valine degradation II
A388_RS09925	PWY-5076	L-leucine degradation III
A388_RS09925	PWY-5078	L-isoleucine degradation II
A388_RS09925	PWY-5079	L-phenylalanine degradation III
A388_RS09925	PWY-5082	L-methionine degradation III
A388_RS09925	PWY-5480	pyruvate fermentation to ethanol I
A388_RS09925	PWY-5486	pyruvate fermentation to ethanol II
A388_RS09925	PWY-5751	phenylethanol biosynthesis
A388_RS09925	PWY-6313	serotonin degradation
A388_RS09925	PWY-6333	acetaldehyde biosynthesis I
A388_RS09925	PWY-6342	noradrenaline and adrenaline degradation
A388_RS09925	PWY-6454	vancomycin resistance I
A388_RS09925	PWY-6587	pyruvate fermentation to ethanol III
A388_RS09925	PWY-6802	salidroside biosynthesis
A388_RS09925	PWY-6871	3-methylbutanol biosynthesis
A388_RS09925	PWY-6901	superpathway of glucose and xylose degradation
A388_RS09925	PWY-7013	L-1,2-propanediol degradation
A388_RS09925	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS09925	PWY-7118	chitin degradation to ethanol
A388_RS09925	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A388_RS09925	PWY-7798	A388_RS09925
A388_RS09970	PWY-7533	gliotoxin biosynthesis
A388_RS09985	PWY-6420	pyrroloquinoline quinone biosynthesis
A388_RS10015	PWY-5901	2,3-dihydroxybenzoate biosynthesis
A388_RS10020	PWY-5901	2,3-dihydroxybenzoate biosynthesis
A388_RS10045	PWY-2421	indole-3-acetate degradation VIII (bacterial)
A388_RS10045	PWY-5648	2-nitrobenzoate degradation II
A388_RS10045	PWY-6079	anthranilate degradation I (aerobic)
A388_RS10050	PWY-2421	indole-3-acetate degradation VIII (bacterial)
A388_RS10050	PWY-5648	2-nitrobenzoate degradation II
A388_RS10050	PWY-6079	anthranilate degradation I (aerobic)
A388_RS10160	PWY-5392	reductive TCA cycle II
A388_RS10160	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A388_RS10160	PWY-5690	TCA cycle II (plants and fungi)
A388_RS10160	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS10160	PWY-6728	methylaspartate cycle
A388_RS10160	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS10160	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS10160	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A388_RS10275	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A388_RS10280	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
A388_RS10280	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A388_RS10300	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A388_RS10300	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A388_RS10330	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A388_RS10430	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS10465	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
A388_RS10465	PWY-622	starch biosynthesis
A388_RS10495	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A388_RS10495	PWY-6164	3-dehydroquinate biosynthesis I
A388_RS10495	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A388_RS10500	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
A388_RS10500	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A388_RS10500	PWY-6269	adenosylcobalamin salvage from cobinamide II
A388_RS10515	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
A388_RS10515	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A388_RS10515	PWY-6269	adenosylcobalamin salvage from cobinamide II
A388_RS10520	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
A388_RS10520	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A388_RS10520	PWY-6269	adenosylcobalamin salvage from cobinamide II
A388_RS10655	PWY-6823	molybdenum cofactor biosynthesis
A388_RS10655	PWY-6891	thiazole biosynthesis II (Bacillus)
A388_RS10655	PWY-6892	thiazole biosynthesis I (E. coli)
A388_RS10655	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
A388_RS10805	PWY-0	putrescine degradation III
A388_RS10805	PWY-6117	spermine and spermidine degradation I
A388_RS10810	PWY-6728	methylaspartate cycle
A388_RS10810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS10810	PWY-7118	chitin degradation to ethanol
A388_RS10810	PWY-7294	xylose degradation IV
A388_RS10810	PWY-7295	L-arabinose degradation IV
A388_RS10810	PWY-7854	A388_RS10810
A388_RS10835	PWY-5686	UMP biosynthesis
A388_RS10835	PWY-7790	A388_RS10835
A388_RS10835	PWY-7791	A388_RS10835
A388_RS10855	PWY-7205	CMP phosphorylation
A388_RS10925	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A388_RS10985	PWY-1042	glycolysis IV (plant cytosol)
A388_RS10985	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A388_RS10985	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS10985	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS10985	PWY-7385	1,3-propanediol biosynthesis (engineered)
A388_RS10995	PWY-1042	glycolysis IV (plant cytosol)
A388_RS10995	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS10995	PWY-6886	1-butanol autotrophic biosynthesis
A388_RS10995	PWY-6901	superpathway of glucose and xylose degradation
A388_RS10995	PWY-7003	glycerol degradation to butanol
A388_RS11075	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
A388_RS11075	PWY-6853	ethylene biosynthesis II (microbes)
A388_RS11075	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A388_RS11115	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A388_RS11115	PWY-5723	Rubisco shunt
A388_RS11115	PWY-6891	thiazole biosynthesis II (Bacillus)
A388_RS11115	PWY-6892	thiazole biosynthesis I (E. coli)
A388_RS11115	PWY-6901	superpathway of glucose and xylose degradation
A388_RS11115	PWY-7560	methylerythritol phosphate pathway II
A388_RS11120	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A388_RS11120	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
A388_RS11160	PWY-6938	NADH repair
A388_RS11165	PWY-6700	queuosine biosynthesis
A388_RS11170	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
A388_RS11480	PWY-6004	glycine betaine biosynthesis V (from glycine)
A388_RS11485	PWY-6936	seleno-amino acid biosynthesis
A388_RS11485	PWY-7274	D-cycloserine biosynthesis
A388_RS11530	PWY-4202	arsenate detoxification I (glutaredoxin)
A388_RS11530	PWY-4621	arsenate detoxification II (glutaredoxin)
A388_RS11565	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS11565	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS11665	PWY-4381	fatty acid biosynthesis initiation I
A388_RS11665	PWY-6799	fatty acid biosynthesis (plant mitochondria)
A388_RS11665	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS11670	PWY-5796	malonate decarboxylase activation
A388_RS11675	PWY-6060	malonate degradation II (biotin-dependent)
A388_RS11680	PWY-6060	malonate degradation II (biotin-dependent)
A388_RS11680	PWY-6679	jadomycin biosynthesis
A388_RS11680	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS11690	PWY-5796	malonate decarboxylase activation
A388_RS11695	PWY-5794	malonate degradation I (biotin-independent)
A388_RS11695	PWY-6060	malonate degradation II (biotin-dependent)
A388_RS11735	PWY-4061	glutathione-mediated detoxification I
A388_RS11735	PWY-6842	glutathione-mediated detoxification II
A388_RS11735	PWY-7112	4-hydroxy-2-nonenal detoxification
A388_RS11735	PWY-7533	gliotoxin biosynthesis
A388_RS11760	PWY-6936	seleno-amino acid biosynthesis
A388_RS11760	PWY-7274	D-cycloserine biosynthesis
A388_RS11770	PWY-6823	molybdenum cofactor biosynthesis
A388_RS11770	PWY-6891	thiazole biosynthesis II (Bacillus)
A388_RS11770	PWY-6892	thiazole biosynthesis I (E. coli)
A388_RS11770	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
A388_RS11945	PWY-6679	jadomycin biosynthesis
A388_RS11945	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS12030	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS12030	PWY-5109	2-methylbutanoate biosynthesis
A388_RS12030	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
A388_RS12030	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
A388_RS12030	PWY-5177	glutaryl-CoA degradation
A388_RS12030	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A388_RS12030	PWY-6435	4-hydroxybenzoate biosynthesis V
A388_RS12030	PWY-6583	pyruvate fermentation to butanol I
A388_RS12030	PWY-6863	pyruvate fermentation to hexanol
A388_RS12030	PWY-6883	pyruvate fermentation to butanol II
A388_RS12030	PWY-6944	androstenedione degradation
A388_RS12030	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
A388_RS12030	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
A388_RS12030	PWY-7007	methyl ketone biosynthesis
A388_RS12030	PWY-7046	4-coumarate degradation (anaerobic)
A388_RS12030	PWY-7094	fatty acid salvage
A388_RS12030	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
A388_RS12030	PWY-735	jasmonic acid biosynthesis
A388_RS12030	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
A388_RS12030	PWY-7606	docosahexaenoate biosynthesis III (mammals)
A388_RS12030	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
A388_RS12030	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
A388_RS12030	PWY-7726	A388_RS12030
A388_RS12030	PWY-7778	A388_RS12030
A388_RS12030	PWY-7779	A388_RS12030
A388_RS12030	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
A388_RS12050	PWY-723	alkylnitronates degradation
A388_RS12085	PWY-6832	2-aminoethylphosphonate degradation II
A388_RS12315	PWY-1341	phenylacetate degradation II (anaerobic)
A388_RS12315	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
A388_RS12315	PWY-7716	A388_RS12315
A388_RS12320	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS12320	PWY-2361	3-oxoadipate degradation
A388_RS12320	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
A388_RS12325	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS12325	PWY-5109	2-methylbutanoate biosynthesis
A388_RS12325	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
A388_RS12325	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
A388_RS12325	PWY-5177	glutaryl-CoA degradation
A388_RS12325	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A388_RS12325	PWY-6435	4-hydroxybenzoate biosynthesis V
A388_RS12325	PWY-6583	pyruvate fermentation to butanol I
A388_RS12325	PWY-6863	pyruvate fermentation to hexanol
A388_RS12325	PWY-6883	pyruvate fermentation to butanol II
A388_RS12325	PWY-6944	androstenedione degradation
A388_RS12325	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
A388_RS12325	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
A388_RS12325	PWY-7007	methyl ketone biosynthesis
A388_RS12325	PWY-7046	4-coumarate degradation (anaerobic)
A388_RS12325	PWY-7094	fatty acid salvage
A388_RS12325	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
A388_RS12325	PWY-735	jasmonic acid biosynthesis
A388_RS12325	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
A388_RS12325	PWY-7606	docosahexaenoate biosynthesis III (mammals)
A388_RS12325	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
A388_RS12325	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
A388_RS12325	PWY-7726	A388_RS12325
A388_RS12325	PWY-7778	A388_RS12325
A388_RS12325	PWY-7779	A388_RS12325
A388_RS12325	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
A388_RS12360	PWY-5176	coumarin biosynthesis (via 2-coumarate)
A388_RS12610	PWY-5169	cyanurate degradation
A388_RS12610	PWY-5703	urea degradation I
A388_RS12610	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A388_RS12635	PWY-5169	cyanurate degradation
A388_RS12635	PWY-5703	urea degradation I
A388_RS12790	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS12790	PWY-5109	2-methylbutanoate biosynthesis
A388_RS12790	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
A388_RS12790	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
A388_RS12790	PWY-5177	glutaryl-CoA degradation
A388_RS12790	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A388_RS12790	PWY-6435	4-hydroxybenzoate biosynthesis V
A388_RS12790	PWY-6583	pyruvate fermentation to butanol I
A388_RS12790	PWY-6863	pyruvate fermentation to hexanol
A388_RS12790	PWY-6883	pyruvate fermentation to butanol II
A388_RS12790	PWY-6944	androstenedione degradation
A388_RS12790	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
A388_RS12790	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
A388_RS12790	PWY-7007	methyl ketone biosynthesis
A388_RS12790	PWY-7046	4-coumarate degradation (anaerobic)
A388_RS12790	PWY-7094	fatty acid salvage
A388_RS12790	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
A388_RS12790	PWY-735	jasmonic acid biosynthesis
A388_RS12790	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
A388_RS12790	PWY-7606	docosahexaenoate biosynthesis III (mammals)
A388_RS12790	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
A388_RS12790	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
A388_RS12790	PWY-7726	A388_RS12790
A388_RS12790	PWY-7778	A388_RS12790
A388_RS12790	PWY-7779	A388_RS12790
A388_RS12790	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
A388_RS12870	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A388_RS12925	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A388_RS12925	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A388_RS13130	PWY-3341	L-proline biosynthesis III
A388_RS13130	PWY-4981	L-proline biosynthesis II (from arginine)
A388_RS13130	PWY-6344	L-ornithine degradation II (Stickland reaction)
A388_RS13220	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS13280	PWY-4381	fatty acid biosynthesis initiation I
A388_RS13355	PWY-5686	UMP biosynthesis
A388_RS13355	PWY-7790	A388_RS13355
A388_RS13355	PWY-7791	A388_RS13355
A388_RS13365	PWY-6825	phosphatidylcholine biosynthesis V
A388_RS13425	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS13435	PWY-1042	glycolysis IV (plant cytosol)
A388_RS13435	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS13435	PWY-6901	superpathway of glucose and xylose degradation
A388_RS13435	PWY-7003	glycerol degradation to butanol
A388_RS13875	PWY-2941	L-lysine biosynthesis II
A388_RS13875	PWY-2942	L-lysine biosynthesis III
A388_RS13875	PWY-5097	L-lysine biosynthesis VI
A388_RS13875	PWY-6559	spermidine biosynthesis II
A388_RS13875	PWY-6562	norspermidine biosynthesis
A388_RS13875	PWY-7153	grixazone biosynthesis
A388_RS13900	PWY-6610	adenine and adenosine salvage IV
A388_RS14055	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
A388_RS14070	PWY-6486	D-galacturonate degradation II
A388_RS14070	PWY-6497	D-galactarate degradation II
A388_RS14070	PWY-6499	D-glucarate degradation II
A388_RS14070	PWY-6501	D-glucuronate degradation II
A388_RS14075	PWY-1042	glycolysis IV (plant cytosol)
A388_RS14075	PWY-1622	formaldehyde assimilation I (serine pathway)
A388_RS14075	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A388_RS14075	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS14075	PWY-5723	Rubisco shunt
A388_RS14075	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS14075	PWY-6499	D-glucarate degradation II
A388_RS14075	PWY-6886	1-butanol autotrophic biosynthesis
A388_RS14075	PWY-6901	superpathway of glucose and xylose degradation
A388_RS14075	PWY-7003	glycerol degradation to butanol
A388_RS14075	PWY-7124	ethylene biosynthesis V (engineered)
A388_RS14075	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A388_RS14085	PWY-6497	D-galactarate degradation II
A388_RS14250	PWY-4983	L-citrulline-nitric oxide cycle
A388_RS14250	PWY-4984	urea cycle
A388_RS14250	PWY-5	canavanine biosynthesis
A388_RS14250	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS14250	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS14260	PWY-5686	UMP biosynthesis
A388_RS14260	PWY-7790	A388_RS14260
A388_RS14260	PWY-7791	A388_RS14260
A388_RS14355	PWY-5381	pyridine nucleotide cycling (plants)
A388_RS14355	PWY-7761	A388_RS14355
A388_RS14375	PWY-2201	folate transformations I
A388_RS14475	PWY-6825	phosphatidylcholine biosynthesis V
A388_RS14510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS14555	PWY-5704	urea degradation II
A388_RS14560	PWY-5704	urea degradation II
A388_RS14565	PWY-5704	urea degradation II
A388_RS14585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS14620	PWY-5278	sulfite oxidation III
A388_RS14620	PWY-5340	sulfate activation for sulfonation
A388_RS14620	PWY-6683	sulfate reduction III (assimilatory)
A388_RS14620	PWY-6932	selenate reduction
A388_RS14625	PWY-5278	sulfite oxidation III
A388_RS14625	PWY-5340	sulfate activation for sulfonation
A388_RS14625	PWY-6683	sulfate reduction III (assimilatory)
A388_RS14625	PWY-6932	selenate reduction
A388_RS14715	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A388_RS14715	PWY-5743	3-hydroxypropanoate cycle
A388_RS14715	PWY-5744	glyoxylate assimilation
A388_RS14715	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A388_RS14715	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS14715	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A388_RS14715	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A388_RS14775	PWY-2201	folate transformations I
A388_RS14775	PWY-3841	folate transformations II
A388_RS14785	PWY-6891	thiazole biosynthesis II (Bacillus)
A388_RS14785	PWY-6892	thiazole biosynthesis I (E. coli)
A388_RS14785	PWY-7560	methylerythritol phosphate pathway II
A388_RS14815	PWY-6317	galactose degradation I (Leloir pathway)
A388_RS15000	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
A388_RS15000	PWY-7494	choline degradation IV
A388_RS15005	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
A388_RS15005	PWY-7494	choline degradation IV
A388_RS15010	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS15080	PWY-6703	preQ<sub>0</sub> biosynthesis
A388_RS15175	PWY-4041	&gamma;-glutamyl cycle
A388_RS15175	PWY-5826	hypoglycin biosynthesis
A388_RS15195	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A388_RS15195	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
A388_RS15235	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A388_RS15290	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS15290	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS15295	PWY-6749	CMP-legionaminate biosynthesis I
A388_RS15360	PWY-7801	A388_RS15360
A388_RS15365	PWY-7799	A388_RS15365
A388_RS15375	PWY-6855	chitin degradation I (archaea)
A388_RS15375	PWY-6902	chitin degradation II
A388_RS15375	PWY-7822	A388_RS15375
A388_RS15430	PWY-5381	pyridine nucleotide cycling (plants)
A388_RS15430	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
A388_RS15430	PWY-7761	A388_RS15430
A388_RS15500	PWY-7851	A388_RS15500
A388_RS15535	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A388_RS15550	PWY-7560	methylerythritol phosphate pathway II
A388_RS15585	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
A388_RS15590	PWY-5155	&beta;-alanine biosynthesis III
A388_RS15605	PWY-6167	flavin biosynthesis II (archaea)
A388_RS15605	PWY-6168	flavin biosynthesis III (fungi)
A388_RS15630	PWY-5367	petroselinate biosynthesis
A388_RS15630	PWY-5515	L-arabinose degradation II
A388_RS15630	PWY-5525	D-glucuronate degradation I
A388_RS15630	PWY-5971	palmitate biosynthesis II (bacteria and plants)
A388_RS15630	PWY-5973	<i>cis</i>-vaccenate biosynthesis
A388_RS15630	PWY-5989	stearate biosynthesis II (bacteria and plants)
A388_RS15630	PWY-5994	palmitate biosynthesis I (animals and fungi)
A388_RS15630	PWY-6113	superpathway of mycolate biosynthesis
A388_RS15630	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
A388_RS15630	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A388_RS15630	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS15630	PWY-7663	gondoate biosynthesis (anaerobic)
A388_RS15630	PWY-7664	oleate biosynthesis IV (anaerobic)
A388_RS15630	PWY-7858	A388_RS15630
A388_RS15630	PWYG-321	mycolate biosynthesis
A388_RS15635	PWY-4381	fatty acid biosynthesis initiation I
A388_RS15635	PWY-6799	fatty acid biosynthesis (plant mitochondria)
A388_RS15635	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS15675	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
A388_RS15680	PWY-2201	folate transformations I
A388_RS15680	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A388_RS15750	PWY-3961	phosphopantothenate biosynthesis II
A388_RS15800	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS15915	PWY-7183	pyrimidine nucleobases salvage I
A388_RS16010	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A388_RS16010	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS16010	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A388_RS16010	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A388_RS16010	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS16010	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS16010	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS16010	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A388_RS16020	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A388_RS16020	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS16020	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A388_RS16020	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A388_RS16020	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS16020	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS16020	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS16020	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A388_RS16080	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A388_RS16080	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A388_RS16080	PWY-6936	seleno-amino acid biosynthesis
A388_RS16080	PWY-702	L-methionine biosynthesis II
A388_RS16180	PWY-6609	adenine and adenosine salvage III
A388_RS16180	PWY-6611	adenine and adenosine salvage V
A388_RS16180	PWY-7179	purine deoxyribonucleosides degradation I
A388_RS16180	PWY-7179-1	purine deoxyribonucleosides degradation
A388_RS16210	PWY-5316	nicotine biosynthesis
A388_RS16210	PWY-7342	superpathway of nicotine biosynthesis
A388_RS16215	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS16255	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A388_RS16255	PWY-5723	Rubisco shunt
A388_RS16265	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS16280	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
A388_RS16280	PWY-5368	dimorphecolate biosynthesis
A388_RS16280	PWY-5995	linoleate biosynthesis I (plants)
A388_RS16280	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
A388_RS16280	PWY-6803	phosphatidylcholine acyl editing
A388_RS16280	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
A388_RS16280	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
A388_RS16280	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
A388_RS16280	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
A388_RS16280	PWY-7470	phosphatidylcholine biosynthesis VII
A388_RS16280	PWY-7618	ricinoleate biosynthesis
A388_RS16330	PWY-5958	acridone alkaloid biosynthesis
A388_RS16330	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A388_RS16330	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A388_RS16350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS16350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS16460	PWY-3341	L-proline biosynthesis III
A388_RS16460	PWY-4981	L-proline biosynthesis II (from arginine)
A388_RS16460	PWY-6344	L-ornithine degradation II (Stickland reaction)
A388_RS16470	PWY-6679	jadomycin biosynthesis
A388_RS16470	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A388_RS16485	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS16585	PWY-6654	phosphopantothenate biosynthesis III
A388_RS16590	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A388_RS16590	PWY-6148	tetrahydromethanopterin biosynthesis
A388_RS16590	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
A388_RS16590	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A388_RS16590	PWY-7852	A388_RS16590
A388_RS16590	PWY-7853	A388_RS16590
A388_RS16630	PWY-6936	seleno-amino acid biosynthesis
A388_RS16890	PWY-5103	L-isoleucine biosynthesis III
A388_RS16890	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS16895	PWY-5101	L-isoleucine biosynthesis II
A388_RS16895	PWY-5103	L-isoleucine biosynthesis III
A388_RS16895	PWY-5104	L-isoleucine biosynthesis IV
A388_RS16895	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A388_RS16895	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A388_RS16895	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A388_RS16895	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS16900	PWY-5101	L-isoleucine biosynthesis II
A388_RS16900	PWY-5103	L-isoleucine biosynthesis III
A388_RS16900	PWY-5104	L-isoleucine biosynthesis IV
A388_RS16900	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A388_RS16900	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A388_RS16900	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A388_RS16900	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS16940	PWY-5971	palmitate biosynthesis II (bacteria and plants)
A388_RS16940	PWY-5973	<i>cis</i>-vaccenate biosynthesis
A388_RS16940	PWY-5989	stearate biosynthesis II (bacteria and plants)
A388_RS16940	PWY-6113	superpathway of mycolate biosynthesis
A388_RS16940	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
A388_RS16940	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A388_RS16940	PWY-7663	gondoate biosynthesis (anaerobic)
A388_RS16940	PWY-7664	oleate biosynthesis IV (anaerobic)
A388_RS16940	PWY-7858	A388_RS16940
A388_RS16940	PWYG-321	mycolate biosynthesis
A388_RS16975	PWY-6012	acyl carrier protein metabolism I
A388_RS16975	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
A388_RS17015	PWY-2201	folate transformations I
A388_RS17020	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A388_RS17020	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
A388_RS17020	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS17020	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS17020	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
A388_RS17020	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A388_RS17020	PWY-7205	CMP phosphorylation
A388_RS17020	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A388_RS17020	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS17020	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS17020	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS17020	PWY-7224	purine deoxyribonucleosides salvage
A388_RS17020	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS17020	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A388_RS17045	PWY-6902	chitin degradation II
A388_RS17045	PWY-7822	A388_RS17045
A388_RS17060	PWY-3341	L-proline biosynthesis III
A388_RS17060	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A388_RS17070	PWY-5530	sorbitol biosynthesis II
A388_RS17070	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A388_RS17080	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A388_RS17080	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
A388_RS17080	PWY-7242	D-fructuronate degradation
A388_RS17080	PWY-7310	D-glucosaminate degradation
A388_RS17080	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
A388_RS17085	PWY-5101	L-isoleucine biosynthesis II
A388_RS17085	PWY-5103	L-isoleucine biosynthesis III
A388_RS17085	PWY-5104	L-isoleucine biosynthesis IV
A388_RS17085	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS17095	PWY-5482	pyruvate fermentation to acetate II
A388_RS17095	PWY-5485	pyruvate fermentation to acetate IV
A388_RS17095	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS17100	PWY-1281	sulfoacetaldehyde degradation I
A388_RS17100	PWY-5482	pyruvate fermentation to acetate II
A388_RS17100	PWY-5485	pyruvate fermentation to acetate IV
A388_RS17100	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS17100	PWY-6637	sulfolactate degradation II
A388_RS17105	PWY-5392	reductive TCA cycle II
A388_RS17105	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A388_RS17105	PWY-5690	TCA cycle II (plants and fungi)
A388_RS17105	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS17105	PWY-6728	methylaspartate cycle
A388_RS17105	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A388_RS17105	PWY-7254	TCA cycle VII (acetate-producers)
A388_RS17105	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A388_RS17145	PWY-6871	3-methylbutanol biosynthesis
A388_RS17150	PWY-5344	L-homocysteine biosynthesis
A388_RS17220	PWY-3841	folate transformations II
A388_RS17220	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A388_RS17220	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A388_RS17220	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A388_RS17220	PWY-7199	pyrimidine deoxyribonucleosides salvage
A388_RS17220	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A388_RS17225	PWY-3841	folate transformations II
A388_RS17225	PWY-6614	tetrahydrofolate biosynthesis
A388_RS17255	PWY-2201	folate transformations I
A388_RS17255	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS17375	PWY-2941	L-lysine biosynthesis II
A388_RS17375	PWY-2942	L-lysine biosynthesis III
A388_RS17375	PWY-5097	L-lysine biosynthesis VI
A388_RS17375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS17375	PWY-6559	spermidine biosynthesis II
A388_RS17375	PWY-6562	norspermidine biosynthesis
A388_RS17375	PWY-7153	grixazone biosynthesis
A388_RS17375	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS17420	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A388_RS17465	PWY-5506	methanol oxidation to formaldehyde IV
A388_RS17585	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A388_RS17620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS17620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS17755	PWY-5839	menaquinol-7 biosynthesis
A388_RS17755	PWY-5844	menaquinol-9 biosynthesis
A388_RS17755	PWY-5849	menaquinol-6 biosynthesis
A388_RS17755	PWY-5890	menaquinol-10 biosynthesis
A388_RS17755	PWY-5891	menaquinol-11 biosynthesis
A388_RS17755	PWY-5892	menaquinol-12 biosynthesis
A388_RS17755	PWY-5895	menaquinol-13 biosynthesis
A388_RS17860	PWY-1042	glycolysis IV (plant cytosol)
A388_RS17860	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS17860	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS17860	PWY-7003	glycerol degradation to butanol
A388_RS17880	PWY-7851	A388_RS17880
A388_RS17955	PWY-5269	cardiolipin biosynthesis II
A388_RS17955	PWY-5668	cardiolipin biosynthesis I
A388_RS17955	PWY-7817	A388_RS17955
A388_RS17985	PWY-1361	benzoyl-CoA degradation I (aerobic)
A388_RS17985	PWY-5109	2-methylbutanoate biosynthesis
A388_RS17985	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
A388_RS17985	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
A388_RS17985	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
A388_RS17985	PWY-5177	glutaryl-CoA degradation
A388_RS17985	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A388_RS17985	PWY-6435	4-hydroxybenzoate biosynthesis V
A388_RS17985	PWY-6583	pyruvate fermentation to butanol I
A388_RS17985	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
A388_RS17985	PWY-6863	pyruvate fermentation to hexanol
A388_RS17985	PWY-6883	pyruvate fermentation to butanol II
A388_RS17985	PWY-6944	androstenedione degradation
A388_RS17985	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
A388_RS17985	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
A388_RS17985	PWY-7007	methyl ketone biosynthesis
A388_RS17985	PWY-7046	4-coumarate degradation (anaerobic)
A388_RS17985	PWY-7094	fatty acid salvage
A388_RS17985	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
A388_RS17985	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
A388_RS17985	PWY-735	jasmonic acid biosynthesis
A388_RS17985	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
A388_RS17985	PWY-7606	docosahexaenoate biosynthesis III (mammals)
A388_RS17985	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
A388_RS17985	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
A388_RS17985	PWY-7726	A388_RS17985
A388_RS17985	PWY-7778	A388_RS17985
A388_RS17985	PWY-7779	A388_RS17985
A388_RS17985	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
A388_RS17990	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
A388_RS17990	PWY-6435	4-hydroxybenzoate biosynthesis V
A388_RS17990	PWY-6863	pyruvate fermentation to hexanol
A388_RS17990	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
A388_RS17990	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
A388_RS17990	PWY-6948	sitosterol degradation to androstenedione
A388_RS17990	PWY-7094	fatty acid salvage
A388_RS17990	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
A388_RS17990	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
A388_RS17990	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
A388_RS17990	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
A388_RS17990	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
A388_RS17990	PWY-735	jasmonic acid biosynthesis
A388_RS17990	PWY-7606	docosahexaenoate biosynthesis III (mammals)
A388_RS17990	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
A388_RS17990	PWY-7726	A388_RS17990
A388_RS18140	PWY-5958	acridone alkaloid biosynthesis
A388_RS18140	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A388_RS18140	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A388_RS18145	PWY-181	photorespiration
A388_RS18190	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A388_RS18190	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
A388_RS18195	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A388_RS18195	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
A388_RS18210	PWY-4983	L-citrulline-nitric oxide cycle
A388_RS18210	PWY-4984	urea cycle
A388_RS18210	PWY-5	canavanine biosynthesis
A388_RS18210	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A388_RS18210	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A388_RS18245	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
A388_RS18275	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS18275	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS18340	PWY-1042	glycolysis IV (plant cytosol)
A388_RS18340	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A388_RS18340	PWY-5484	glycolysis II (from fructose 6-phosphate)
A388_RS18340	PWY-5723	Rubisco shunt
A388_RS18340	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS18340	PWY-6886	1-butanol autotrophic biosynthesis
A388_RS18340	PWY-6901	superpathway of glucose and xylose degradation
A388_RS18340	PWY-7003	glycerol degradation to butanol
A388_RS18340	PWY-7124	ethylene biosynthesis V (engineered)
A388_RS18340	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A388_RS18375	PWY-6167	flavin biosynthesis II (archaea)
A388_RS18375	PWY-6168	flavin biosynthesis III (fungi)
A388_RS18375	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS18385	PWY-5525	D-glucuronate degradation I
A388_RS18485	PWY-6614	tetrahydrofolate biosynthesis
A388_RS18625	PWY-6899	base-degraded thiamin salvage
A388_RS18625	PWY-7356	thiamin salvage IV (yeast)
A388_RS18700	PWY-7723	A388_RS18700
A388_RS18720	PWY-5132	humulone biosynthesis
A388_RS18720	PWY-5133	cohumulone biosynthesis
A388_RS18720	PWY-6672	<i>cis</i>-genanyl-CoA degradation
A388_RS18720	PWY-7118	chitin degradation to ethanol
A388_RS18720	PWY-7857	A388_RS18720
A388_RS18735	PWY-2201	folate transformations I
A388_RS18740	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
A388_RS18765	PWY-7805	A388_RS18765
A388_RS18765	PWY-7807	A388_RS18765
A388_RS18770	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
A388_RS18770	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
A388_RS18775	PWY-6749	CMP-legionaminate biosynthesis I
A388_RS18780	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A388_RS18780	PWY-6596	adenosine nucleotides degradation I
A388_RS18780	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A388_RS18815	PWY-6891	thiazole biosynthesis II (Bacillus)
A388_RS18815	PWY-6892	thiazole biosynthesis I (E. coli)
A388_RS18815	PWY-7560	methylerythritol phosphate pathway II
A388_RS18830	PWY-2201	folate transformations I
A388_RS18830	PWY-5497	purine nucleobases degradation II (anaerobic)
A388_RS18850	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS18850	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS18855	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS18855	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS18860	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A388_RS18860	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A388_RS18860	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A388_RS18860	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A388_RS18880	PWY-5686	UMP biosynthesis
A388_RS18880	PWY-7790	A388_RS18880
A388_RS18880	PWY-7791	A388_RS18880
A388_RS18935	PWY-5691	urate degradation to allantoin I
A388_RS18935	PWY-7394	urate degradation to allantoin II
A388_RS18935	PWY-7849	A388_RS18935
A388_RS18940	PWY-5691	urate degradation to allantoin I
A388_RS18940	PWY-7394	urate degradation to allantoin II
A388_RS18940	PWY-7849	A388_RS18940
A388_RS18960	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
A388_RS18965	PWY-5694	allantoin degradation to glyoxylate I
A388_RS18965	PWY-5705	allantoin degradation to glyoxylate III
A388_RS19020	PWY-6840	homoglutathione biosynthesis
A388_RS19020	PWY-7255	ergothioneine biosynthesis I (bacteria)
A388_RS19070	PWY-6857	retinol biosynthesis
A388_RS19075	PWY-5669	phosphatidylethanolamine biosynthesis I
A388_RS19080	PWY-5350	thiosulfate disproportionation III (rhodanese)
A388_RS19085	PWY-5381	pyridine nucleotide cycling (plants)
A388_RS19120	PWY-6167	flavin biosynthesis II (archaea)
A388_RS19120	PWY-6168	flavin biosynthesis III (fungi)
A388_RS19120	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A388_RS19125	PWY-6167	flavin biosynthesis II (archaea)
A388_RS19125	PWY-6168	flavin biosynthesis III (fungi)
A388_RS19135	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A388_RS19135	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A388_RS19135	PWY-6896	thiamin salvage I
A388_RS19135	PWY-6897	thiamin salvage II
A388_RS19140	PWY-5269	cardiolipin biosynthesis II
A388_RS19140	PWY-5668	cardiolipin biosynthesis I
A388_RS19140	PWY-7817	A388_RS19140
A388_RS19145	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A388_RS19145	PWY-5667	CDP-diacylglycerol biosynthesis I
A388_RS19145	PWY-6453	stigma estolide biosynthesis
A388_RS19145	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
A388_RS19145	PWY-7587	oleate biosynthesis III (cyanobacteria)
A388_RS19150	PWY-6749	CMP-legionaminate biosynthesis I
A388_RS19180	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A388_RS19180	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A388_RS19200	PWY-5028	L-histidine degradation II
A388_RS19200	PWY-5030	L-histidine degradation III
A388_RS19210	PWY-5028	L-histidine degradation II
A388_RS19210	PWY-5030	L-histidine degradation III
A388_RS19215	PWY-5028	L-histidine degradation II
A388_RS19215	PWY-5030	L-histidine degradation III
A388_RS19240	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A388_RS19295	PWY-2941	L-lysine biosynthesis II
A388_RS19295	PWY-2942	L-lysine biosynthesis III
A388_RS19295	PWY-5097	L-lysine biosynthesis VI
A388_RS19305	PWY-6123	inosine-5'-phosphate biosynthesis I
A388_RS19305	PWY-6124	inosine-5'-phosphate biosynthesis II
A388_RS19305	PWY-7234	inosine-5'-phosphate biosynthesis III
A388_RS19410	PWY-2941	L-lysine biosynthesis II
A388_RS19410	PWY-2942	L-lysine biosynthesis III
A388_RS19410	PWY-5097	L-lysine biosynthesis VI
A388_RS19445	PWY-1622	formaldehyde assimilation I (serine pathway)
A388_RS19445	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A388_RS19445	PWY-5913	TCA cycle VI (obligate autotrophs)
A388_RS19445	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A388_RS19445	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
A388_RS19445	PWY-6549	L-glutamine biosynthesis III
A388_RS19445	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A388_RS19445	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A388_RS19445	PWY-7124	ethylene biosynthesis V (engineered)
A388_RS19470	PWY-5101	L-isoleucine biosynthesis II
A388_RS19470	PWY-5103	L-isoleucine biosynthesis III
A388_RS19470	PWY-5104	L-isoleucine biosynthesis IV
A388_RS19470	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A388_RS19480	PWY-6825	phosphatidylcholine biosynthesis V