A388_RS00040 SM00382 ATPases associated with a variety of cellular activities A388_RS00055 SM00387 Histidine kinase-like ATPases A388_RS00055 SM00433 TopoisomeraseII A388_RS00065 SM00480 DNA polymerase III beta subunit A388_RS00070 SM00382 ATPases associated with a variety of cellular activities A388_RS00070 SM00760 Bacterial dnaA protein helix-turn-helix domain A388_RS00085 SM01234 A388_RS00085 A388_RS00150 SM00014 Acid phosphatase homologues A388_RS00175 SM01001 AIR carboxylase A388_RS00195 SM00235 Zinc-dependent metalloprotease A388_RS00200 SM00235 Zinc-dependent metalloprotease A388_RS00220 SM00849 Metallo-beta-lactamase superfamily A388_RS00270 SM00248 ankyrin repeats A388_RS00295 SM00904 Riboflavin kinase A388_RS00315 SM00382 ATPases associated with a variety of cellular activities A388_RS00330 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS00335 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS00420 SM00644 A388_RS00420 A388_RS00445 SM00226 Low molecular weight phosphatase family A388_RS00455 SM00984 UDP binding domain A388_RS00485 SM00984 UDP binding domain A388_RS00520 SM00984 UDP binding domain A388_RS00560 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS00560 SM00895 A388_RS00560 A388_RS00585 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS00585 SM00895 A388_RS00585 A388_RS00670 SM00344 helix_turn_helix ASNC type A388_RS00680 SM01005 Alanine racemase, C-terminal domain A388_RS00740 SM00421 helix_turn_helix, Lux Regulon A388_RS00845 SM00836 DALR anticodon binding domain A388_RS00845 SM01016 Arginyl tRNA synthetase N terminal dom A388_RS00850 SM00919 Malic enzyme, NAD binding domain A388_RS00850 SM01274 A388_RS00850 A388_RS00870 SM00382 ATPases associated with a variety of cellular activities A388_RS00920 SM00382 ATPases associated with a variety of cellular activities A388_RS00940 SM00342 helix_turn_helix, arabinose operon control protein A388_RS01055 SM00422 helix_turn_helix, mercury resistance A388_RS01065 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS01085 SM00641 Glycosyl hydrolases family 25 A388_RS01100 SM01091 Transporter associated domain A388_RS01120 SM00434 DNA Topoisomerase IV A388_RS01155 SM01130 A388_RS01155 A388_RS01160 SM01007 Class II Aldolase and Adducin N-terminal domain A388_RS01165 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS01185 SM00382 ATPases associated with a variety of cellular activities A388_RS01220 SM00226 Low molecular weight phosphatase family A388_RS01225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A388_RS01240 SM00422 helix_turn_helix, mercury resistance A388_RS01270 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A388_RS01270 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A388_RS01270 SM00493 A388_RS01270 A388_RS01345 SM00422 helix_turn_helix, mercury resistance A388_RS01370 SM00422 helix_turn_helix, mercury resistance A388_RS01410 SM01059 Chloramphenicol acetyltransferase A388_RS01435 SM00857 Resolvase, N terminal domain A388_RS01460 SM00857 Resolvase, N terminal domain A388_RS01525 SM00342 helix_turn_helix, arabinose operon control protein A388_RS01575 SM00342 helix_turn_helix, arabinose operon control protein A388_RS01600 SM00477 DNA/RNA non-specific endonuclease A388_RS01600 SM00892 DNA/RNA non-specific endonuclease A388_RS01625 SM00342 helix_turn_helix, arabinose operon control protein A388_RS01645 SM00357 Cold shock protein domain A388_RS01660 SM00530 Helix-turn-helix XRE-family like proteins A388_RS01670 SM00474 3'-5' exonuclease A388_RS01720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A388_RS01720 SM00387 Histidine kinase-like ATPases A388_RS01720 SM00388 His Kinase A (phosphoacceptor) domain A388_RS01725 SM00448 cheY-homologous receiver domain A388_RS01725 SM00862 Transcriptional regulatory protein, C terminal A388_RS01730 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS01730 SM00732 Likely ribonuclease with RNase H fold. A388_RS01735 SM00947 Carbonic anhydrase A388_RS01750 SM00382 ATPases associated with a variety of cellular activities A388_RS01890 SM00842 Cell division protein FtsA A388_RS01910 SM00965 Secretin and TonB N terminus short domain A388_RS01985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A388_RS01985 SM00954 Region found in RelA / SpoT proteins A388_RS01990 SM01409 A388_RS01990 A388_RS01995 SM00072 Guanylate kinase homologues. A388_RS02180 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A388_RS02285 SM00116 Domain in cystathionine beta-synthase and other proteins. A388_RS02325 SM00861 Transketolase, pyrimidine binding domain A388_RS02335 SM00487 DEAD-like helicases superfamily A388_RS02335 SM00490 helicase superfamily c-terminal domain A388_RS02340 SM00382 ATPases associated with a variety of cellular activities A388_RS02385 SM00487 DEAD-like helicases superfamily A388_RS02385 SM00490 helicase superfamily c-terminal domain A388_RS02400 SM00563 Phosphate acyltransferases A388_RS02450 SM01403 A388_RS02450 A388_RS02470 SM01382 A388_RS02470 A388_RS02470 SM01383 A388_RS02470 A388_RS02485 SM00322 K homology RNA-binding domain A388_RS02505 SM01374 A388_RS02505 A388_RS02510 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A388_RS02575 SM00363 S4 RNA-binding domain A388_RS02575 SM01390 A388_RS02575 A388_RS02580 SM00662 RNA polymerases D A388_RS02640 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS02640 SM00955 A388_RS02640 A388_RS02695 SM00342 helix_turn_helix, arabinose operon control protein A388_RS02745 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS02775 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A388_RS02865 SM00878 Biotin carboxylase C-terminal domain A388_RS02900 SM00650 Ribosomal RNA adenine dimethylases A388_RS02930 SM00563 Phosphate acyltransferases A388_RS02935 SM00155 Phospholipase D. Active site motifs. A388_RS02950 SM00267 diguanylate cyclase A388_RS03025 SM00450 Rhodanese Homology Domain A388_RS03050 SM00481 DNA polymerase alpha chain like domain A388_RS03080 SM01323 A388_RS03080 A388_RS03125 SM00479 A388_RS03125 A388_RS03165 SM00530 Helix-turn-helix XRE-family like proteins A388_RS03310 SM00028 Tetratricopeptide repeats A388_RS03335 SM00387 Histidine kinase-like ATPases A388_RS03335 SM00388 His Kinase A (phosphoacceptor) domain A388_RS03450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A388_RS03450 SM00387 Histidine kinase-like ATPases A388_RS03450 SM00388 His Kinase A (phosphoacceptor) domain A388_RS03455 SM00448 cheY-homologous receiver domain A388_RS03455 SM00862 Transcriptional regulatory protein, C terminal A388_RS03515 SM00342 helix_turn_helix, arabinose operon control protein A388_RS03545 SM00849 Metallo-beta-lactamase superfamily A388_RS03555 SM00957 SecA DEAD-like domain A388_RS03555 SM00958 SecA preprotein cross-linking domain A388_RS03605 SM00342 helix_turn_helix, arabinose operon control protein A388_RS03620 SM00564 beta-propeller repeat A388_RS03680 SM00838 Elongation factor G C-terminus A388_RS03700 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A388_RS03700 SM01232 A388_RS03700 A388_RS03725 SM00671 Sel1-like repeats. A388_RS03780 SM00448 cheY-homologous receiver domain A388_RS03785 SM00448 cheY-homologous receiver domain A388_RS03790 SM00260 Two component signalling adaptor domain A388_RS03795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A388_RS03800 SM00073 Histidine Phosphotransfer domain A388_RS03800 SM00260 Two component signalling adaptor domain A388_RS03800 SM00387 Histidine kinase-like ATPases A388_RS03800 SM00448 cheY-homologous receiver domain A388_RS03800 SM01231 A388_RS03800 A388_RS03810 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS03955 SM00845 GatB domain A388_RS03990 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS04025 SM00342 helix_turn_helix, arabinose operon control protein A388_RS04045 SM00342 helix_turn_helix, arabinose operon control protein A388_RS04050 SM00829 Enoylreductase A388_RS04140 SM00382 ATPases associated with a variety of cellular activities A388_RS04445 SM00244 prohibitin homologues A388_RS04460 SM00563 Phosphate acyltransferases A388_RS04480 SM00448 cheY-homologous receiver domain A388_RS04480 SM00862 Transcriptional regulatory protein, C terminal A388_RS04485 SM00387 Histidine kinase-like ATPases A388_RS04485 SM00388 His Kinase A (phosphoacceptor) domain A388_RS04535 SM00822 A388_RS04535 A388_RS04580 SM00014 Acid phosphatase homologues A388_RS04685 SM00450 Rhodanese Homology Domain A388_RS04730 SM00861 Transketolase, pyrimidine binding domain A388_RS04750 SM00881 CoA binding domain A388_RS04800 SM00854 Bacterial capsule synthesis protein PGA_cap A388_RS04830 SM00851 MGS-like domain A388_RS04830 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A388_RS04835 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A388_RS04850 SM01103 A388_RS04850 A388_RS04860 SM00382 ATPases associated with a variety of cellular activities A388_RS04935 SM00046 Diacylglycerol kinase catalytic domain (presumed) A388_RS04950 SM00883 Chaperonin 10 Kd subunit A388_RS04965 SM00849 Metallo-beta-lactamase superfamily A388_RS05120 SM00978 A388_RS05120 A388_RS05125 SM00382 ATPases associated with a variety of cellular activities A388_RS05165 SM00893 Electron transfer flavoprotein domain A388_RS05170 SM00893 Electron transfer flavoprotein domain A388_RS05175 SM00434 DNA Topoisomerase IV A388_RS05245 SM00382 ATPases associated with a variety of cellular activities A388_RS05250 SM00849 Metallo-beta-lactamase superfamily A388_RS05365 SM00382 ATPases associated with a variety of cellular activities A388_RS05370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A388_RS05375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A388_RS05380 SM01211 A388_RS05380 A388_RS05450 SM00382 ATPases associated with a variety of cellular activities A388_RS05500 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A388_RS05510 SM00838 Elongation factor G C-terminus A388_RS05525 SM00358 Double-stranded RNA binding motif A388_RS05525 SM00535 Ribonuclease III family A388_RS05595 SM00267 diguanylate cyclase A388_RS05605 SM00487 DEAD-like helicases superfamily A388_RS05605 SM00490 helicase superfamily c-terminal domain A388_RS05620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A388_RS05640 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A388_RS05740 SM01329 A388_RS05740 A388_RS05795 SM00880 A388_RS05795 A388_RS05795 SM01118 A388_RS05795 A388_RS05855 SM00487 DEAD-like helicases superfamily A388_RS05855 SM00490 helicase superfamily c-terminal domain A388_RS05910 SM00344 helix_turn_helix ASNC type A388_RS05940 SM00382 ATPases associated with a variety of cellular activities A388_RS05985 SM00936 Penicillin-binding protein 5, C-terminal domain A388_RS06005 SM00257 Lysin motif A388_RS06040 SM00052 Putative diguanylate phosphodiesterase A388_RS06055 SM00841 Elongation factor P, C-terminal A388_RS06055 SM01185 A388_RS06055 A388_RS06210 SM00382 ATPases associated with a variety of cellular activities A388_RS06255 SM00382 ATPases associated with a variety of cellular activities A388_RS06260 SM00382 ATPases associated with a variety of cellular activities A388_RS06320 SM01092 CO dehydrogenase flavoprotein C-terminal domain A388_RS06325 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A388_RS06335 SM00463 Small MutS-related domain A388_RS06375 SM01230 A388_RS06375 A388_RS06430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A388_RS06440 SM00919 Malic enzyme, NAD binding domain A388_RS06440 SM01274 A388_RS06440 A388_RS06445 SM00052 Putative diguanylate phosphodiesterase A388_RS06445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A388_RS06445 SM00091 PAS domain A388_RS06445 SM00267 diguanylate cyclase A388_RS06460 SM00996 S-adenosyl-L-homocysteine hydrolase A388_RS06460 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A388_RS06480 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS06525 SM00342 helix_turn_helix, arabinose operon control protein A388_RS06575 SM00382 ATPases associated with a variety of cellular activities A388_RS06650 SM00530 Helix-turn-helix XRE-family like proteins A388_RS06675 SM00382 ATPases associated with a variety of cellular activities A388_RS06890 SM01040 BRO family, N-terminal domain A388_RS06980 SM00479 A388_RS06980 A388_RS07020 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS07035 SM00382 ATPases associated with a variety of cellular activities A388_RS07055 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS07080 SM00382 ATPases associated with a variety of cellular activities A388_RS07090 SM00448 cheY-homologous receiver domain A388_RS07090 SM00862 Transcriptional regulatory protein, C terminal A388_RS07095 SM00387 Histidine kinase-like ATPases A388_RS07095 SM00388 His Kinase A (phosphoacceptor) domain A388_RS07155 SM00830 Chorismate mutase type II A388_RS07215 SM00357 Cold shock protein domain A388_RS07220 SM00487 DEAD-like helicases superfamily A388_RS07220 SM00490 helicase superfamily c-terminal domain A388_RS07240 SM00855 Phosphoglycerate mutase family A388_RS07320 SM00220 Serine/Threonine protein kinases, catalytic domain A388_RS07385 SM00095 Transthyretin A388_RS07395 SM00448 cheY-homologous receiver domain A388_RS07395 SM00862 Transcriptional regulatory protein, C terminal A388_RS07400 SM00387 Histidine kinase-like ATPases A388_RS07400 SM00388 His Kinase A (phosphoacceptor) domain A388_RS07440 SM00388 His Kinase A (phosphoacceptor) domain A388_RS07445 SM00448 cheY-homologous receiver domain A388_RS07445 SM00862 Transcriptional regulatory protein, C terminal A388_RS07505 SM00849 Metallo-beta-lactamase superfamily A388_RS07515 SM00382 ATPases associated with a variety of cellular activities A388_RS07515 SM00930 A388_RS07515 A388_RS07525 SM01209 A388_RS07525 A388_RS07525 SM01210 A388_RS07525 A388_RS07530 SM00798 AICARFT/IMPCHase bienzyme A388_RS07530 SM00851 MGS-like domain A388_RS07555 SM01228 A388_RS07555 A388_RS07575 SM00460 Transglutaminase/protease-like homologues A388_RS07585 SM01005 Alanine racemase, C-terminal domain A388_RS07705 SM00937 A388_RS07705 A388_RS07720 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS07725 SM00342 helix_turn_helix, arabinose operon control protein A388_RS07730 SM00822 A388_RS07730 A388_RS07745 SM00903 Flavin reductase like domain A388_RS07760 SM00905 Dihydroneopterin aldolase A388_RS07785 SM00387 Histidine kinase-like ATPases A388_RS07785 SM00388 His Kinase A (phosphoacceptor) domain A388_RS07790 SM00448 cheY-homologous receiver domain A388_RS07790 SM00862 Transcriptional regulatory protein, C terminal A388_RS07795 SM01230 A388_RS07795 A388_RS07880 SM00363 S4 RNA-binding domain A388_RS07905 SM00853 MutL C terminal dimerisation domain A388_RS07905 SM01340 A388_RS07905 A388_RS07990 SM00382 ATPases associated with a variety of cellular activities A388_RS08020 SM00972 Spore Coat Protein U domain A388_RS08035 SM00972 Spore Coat Protein U domain A388_RS08055 SM00830 Chorismate mutase type II A388_RS08060 SM00344 helix_turn_helix ASNC type A388_RS08160 SM00382 ATPases associated with a variety of cellular activities A388_RS08185 SM00831 Cation transporter/ATPase, N-terminus A388_RS08200 SM00344 helix_turn_helix ASNC type A388_RS08230 SM00822 A388_RS08230 A388_RS08255 SM00382 ATPases associated with a variety of cellular activities A388_RS08280 SM00226 Low molecular weight phosphatase family A388_RS08315 SM01236 A388_RS08315 A388_RS08330 SM00878 Biotin carboxylase C-terminal domain A388_RS08360 SM00448 cheY-homologous receiver domain A388_RS08360 SM01012 A388_RS08360 A388_RS08380 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A388_RS08390 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A388_RS08395 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS08410 SM00852 Probable molybdopterin binding domain A388_RS08415 SM00852 Probable molybdopterin binding domain A388_RS08425 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS08515 SM00382 ATPases associated with a variety of cellular activities A388_RS08515 SM00448 cheY-homologous receiver domain A388_RS08520 SM00091 PAS domain A388_RS08520 SM00387 Histidine kinase-like ATPases A388_RS08520 SM00388 His Kinase A (phosphoacceptor) domain A388_RS08530 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS08560 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A388_RS08570 SM00935 Outer membrane protein (OmpH-like) A388_RS08605 SM00382 ATPases associated with a variety of cellular activities A388_RS08610 SM00363 S4 RNA-binding domain A388_RS08640 SM00344 helix_turn_helix ASNC type A388_RS08690 SM00052 Putative diguanylate phosphodiesterase A388_RS08690 SM00091 PAS domain A388_RS08690 SM00267 diguanylate cyclase A388_RS08700 SM00347 helix_turn_helix multiple antibiotic resistance protein A388_RS08775 SM00116 Domain in cystathionine beta-synthase and other proteins. A388_RS08800 SM00382 ATPases associated with a variety of cellular activities A388_RS08800 SM00962 SRP54-type protein, GTPase domain A388_RS08800 SM00963 SRP54-type protein, helical bundle domain A388_RS08865 SM01264 A388_RS08865 A388_RS08905 SM00859 Semialdehyde dehydrogenase, NAD binding domain A388_RS08920 SM00382 ATPases associated with a variety of cellular activities A388_RS08920 SM01086 C-terminal, D2-small domain, of ClpB protein A388_RS08985 SM01192 A388_RS08985 A388_RS08985 SM01193 A388_RS08985 A388_RS09005 SM00882 Coenzyme A transferase A388_RS09010 SM00882 Coenzyme A transferase A388_RS09020 SM00998 Adenylosuccinate lyase C-terminus A388_RS09055 SM00710 Parallel beta-helix repeats A388_RS09065 SM00564 beta-propeller repeat A388_RS09085 SM00849 Metallo-beta-lactamase superfamily A388_RS09090 SM00346 helix_turn_helix isocitrate lyase regulation A388_RS09110 SM00855 Phosphoglycerate mutase family A388_RS09130 SM00347 helix_turn_helix multiple antibiotic resistance protein A388_RS09175 SM00903 Flavin reductase like domain A388_RS09180 SM00342 helix_turn_helix, arabinose operon control protein A388_RS09220 SM00882 Coenzyme A transferase A388_RS09225 SM00882 Coenzyme A transferase A388_RS09240 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A388_RS09255 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS09255 SM00895 A388_RS09255 A388_RS09305 SM00422 helix_turn_helix, mercury resistance A388_RS09335 SM00342 helix_turn_helix, arabinose operon control protein A388_RS09445 SM00860 SMI1 / KNR4 family A388_RS09485 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS09485 SM00866 A388_RS09485 A388_RS09580 SM01400 A388_RS09580 A388_RS09600 SM00421 helix_turn_helix, Lux Regulon A388_RS09635 SM00822 A388_RS09635 A388_RS09640 SM00822 A388_RS09640 A388_RS09650 SM00342 helix_turn_helix, arabinose operon control protein A388_RS09660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A388_RS09660 SM00387 Histidine kinase-like ATPases A388_RS09660 SM00388 His Kinase A (phosphoacceptor) domain A388_RS09665 SM00448 cheY-homologous receiver domain A388_RS09665 SM00862 Transcriptional regulatory protein, C terminal A388_RS09925 SM00829 Enoylreductase A388_RS09950 SM00155 Phospholipase D. Active site motifs. A388_RS09975 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS10025 SM00382 ATPases associated with a variety of cellular activities A388_RS10060 SM00342 helix_turn_helix, arabinose operon control protein A388_RS10070 SM00903 Flavin reductase like domain A388_RS10095 SM00342 helix_turn_helix, arabinose operon control protein A388_RS10120 SM00882 Coenzyme A transferase A388_RS10125 SM00882 Coenzyme A transferase A388_RS10180 SM00567 E-Z type HEAT repeats A388_RS10185 SM00382 ATPases associated with a variety of cellular activities A388_RS10210 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS10210 SM00866 A388_RS10210 A388_RS10230 SM00342 helix_turn_helix, arabinose operon control protein A388_RS10255 SM00849 Metallo-beta-lactamase superfamily A388_RS10260 SM00382 ATPases associated with a variety of cellular activities A388_RS10270 SM00829 Enoylreductase A388_RS10290 SM00861 Transketolase, pyrimidine binding domain A388_RS10300 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS10325 SM00267 diguanylate cyclase A388_RS10350 SM00382 ATPases associated with a variety of cellular activities A388_RS10380 SM00341 Helicase and RNase D C-terminal A388_RS10380 SM00474 3'-5' exonuclease A388_RS10385 SM00493 A388_RS10385 A388_RS10435 SM01324 A388_RS10435 A388_RS10510 SM00855 Phosphoglycerate mutase family A388_RS10535 SM01006 Siderophore biosynthesis protein domain A388_RS10625 SM00342 helix_turn_helix, arabinose operon control protein A388_RS10635 SM00411 bacterial (prokaryotic) histone like domain A388_RS10670 SM00271 DnaJ molecular chaperone homology domain A388_RS10685 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain A388_RS10695 SM00487 DEAD-like helicases superfamily A388_RS10695 SM00490 helicase superfamily c-terminal domain A388_RS10695 SM00982 A388_RS10695 A388_RS10695 SM01058 CarD-like/TRCF domain A388_RS10750 SM00382 ATPases associated with a variety of cellular activities A388_RS10820 SM00342 helix_turn_helix, arabinose operon control protein A388_RS10835 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A388_RS10845 SM00411 bacterial (prokaryotic) histone like domain A388_RS10850 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS10875 SM00986 Uracil DNA glycosylase superfamily A388_RS10875 SM00987 UreE urease accessory protein, C-terminal domain A388_RS10935 SM00382 ATPases associated with a variety of cellular activities A388_RS10950 SM00470 ParB-like nuclease domain A388_RS11010 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A388_RS11020 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A388_RS11040 SM00382 ATPases associated with a variety of cellular activities A388_RS11050 SM00342 helix_turn_helix, arabinose operon control protein A388_RS11070 SM00344 helix_turn_helix ASNC type A388_RS11105 SM00867 YceI-like domain A388_RS11115 SM00861 Transketolase, pyrimidine binding domain A388_RS11150 SM00530 Helix-turn-helix XRE-family like proteins A388_RS11170 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS11170 SM00876 Biotin and Thiamin Synthesis associated domain A388_RS11280 SM01236 A388_RS11280 A388_RS11295 SM00563 Phosphate acyltransferases A388_RS11305 SM00344 helix_turn_helix ASNC type A388_RS11315 SM00382 ATPases associated with a variety of cellular activities A388_RS11330 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS11395 SM00100 Cyclic nucleotide-monophosphate binding domain A388_RS11395 SM00419 helix_turn_helix, cAMP Regulatory protein A388_RS11430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A388_RS11445 SM00342 helix_turn_helix, arabinose operon control protein A388_RS11470 SM00870 A388_RS11470 A388_RS11475 SM00481 DNA polymerase alpha chain like domain A388_RS11525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A388_RS11555 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS11555 SM00895 A388_RS11555 A388_RS11580 SM00382 ATPases associated with a variety of cellular activities A388_RS11585 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS11645 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS11665 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A388_RS11715 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS11750 SM00822 A388_RS11750 A388_RS11755 SM00450 Rhodanese Homology Domain A388_RS11785 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS11790 SM00062 Bacterial periplasmic substrate-binding proteins A388_RS11795 SM00382 ATPases associated with a variety of cellular activities A388_RS11820 SM00421 helix_turn_helix, Lux Regulon A388_RS11820 SM00448 cheY-homologous receiver domain A388_RS11825 SM00387 Histidine kinase-like ATPases A388_RS11825 SM00388 His Kinase A (phosphoacceptor) domain A388_RS11825 SM00448 cheY-homologous receiver domain A388_RS11835 SM00344 helix_turn_helix ASNC type A388_RS11855 SM00384 DNA binding domain with preference for A/T rich regions A388_RS11870 SM01060 A388_RS11870 A388_RS11875 SM01236 A388_RS11875 A388_RS11955 SM00878 Biotin carboxylase C-terminal domain A388_RS12000 SM00882 Coenzyme A transferase A388_RS12005 SM00882 Coenzyme A transferase A388_RS12040 SM00346 helix_turn_helix isocitrate lyase regulation A388_RS12060 SM00346 helix_turn_helix isocitrate lyase regulation A388_RS12100 SM00382 ATPases associated with a variety of cellular activities A388_RS12110 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS12110 SM00866 A388_RS12110 A388_RS12120 SM00346 helix_turn_helix isocitrate lyase regulation A388_RS12170 SM00903 Flavin reductase like domain A388_RS12185 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS12185 SM00895 A388_RS12185 A388_RS12200 SM01060 A388_RS12200 A388_RS12250 SM00357 Cold shock protein domain A388_RS12390 SM00342 helix_turn_helix, arabinose operon control protein A388_RS12415 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS12415 SM00895 A388_RS12415 A388_RS12425 SM01130 A388_RS12425 A388_RS12440 SM00422 helix_turn_helix, mercury resistance A388_RS12475 SM00248 ankyrin repeats A388_RS12510 SM00382 ATPases associated with a variety of cellular activities A388_RS12510 SM01086 C-terminal, D2-small domain, of ClpB protein A388_RS12600 SM00382 ATPases associated with a variety of cellular activities A388_RS12635 SM00796 Allophanate hydrolase subunit 1 A388_RS12635 SM00797 Allophanate hydrolase subunit 2 A388_RS12635 SM00878 Biotin carboxylase C-terminal domain A388_RS12650 SM00829 Enoylreductase A388_RS12685 SM00671 Sel1-like repeats. A388_RS12695 SM00878 Biotin carboxylase C-terminal domain A388_RS12700 SM00796 Allophanate hydrolase subunit 1 A388_RS12700 SM00797 Allophanate hydrolase subunit 2 A388_RS12850 SM00344 helix_turn_helix ASNC type A388_RS12855 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A388_RS12855 SM00534 ATPase domain of DNA mismatch repair MUTS family A388_RS12900 SM00382 ATPases associated with a variety of cellular activities A388_RS12910 SM00382 ATPases associated with a variety of cellular activities A388_RS12930 SM00116 Domain in cystathionine beta-synthase and other proteins. A388_RS12935 SM00840 A388_RS12935 A388_RS12980 SM00710 Parallel beta-helix repeats A388_RS12985 SM00060 Fibronectin type 3 domain A388_RS13145 SM00357 Cold shock protein domain A388_RS13170 SM00530 Helix-turn-helix XRE-family like proteins A388_RS13225 SM00422 helix_turn_helix, mercury resistance A388_RS13285 SM00382 ATPases associated with a variety of cellular activities A388_RS13285 SM00487 DEAD-like helicases superfamily A388_RS13285 SM00490 helicase superfamily c-terminal domain A388_RS13285 SM00847 Helicase associated domain (HA2) Add an annotation A388_RS13365 SM00981 A388_RS13365 A388_RS13380 SM00382 ATPases associated with a variety of cellular activities A388_RS13380 SM01086 C-terminal, D2-small domain, of ClpB protein A388_RS13400 SM00100 Cyclic nucleotide-monophosphate binding domain A388_RS13400 SM00419 helix_turn_helix, cAMP Regulatory protein A388_RS13425 SM00788 Adenylosuccinate synthetase A388_RS13435 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A388_RS13440 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A388_RS13515 SM00487 DEAD-like helicases superfamily A388_RS13730 SM00530 Helix-turn-helix XRE-family like proteins A388_RS13755 SM00382 ATPases associated with a variety of cellular activities A388_RS13835 SM00479 A388_RS13835 A388_RS13960 SM00342 helix_turn_helix, arabinose operon control protein A388_RS14005 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS14005 SM00895 A388_RS14005 A388_RS14010 SM00347 helix_turn_helix multiple antibiotic resistance protein A388_RS14060 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS14060 SM00895 A388_RS14060 A388_RS14070 SM01130 A388_RS14070 A388_RS14075 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A388_RS14085 SM00858 A388_RS14085 A388_RS14095 SM00342 helix_turn_helix, arabinose operon control protein A388_RS14135 SM00344 helix_turn_helix ASNC type A388_RS14150 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS14150 SM00895 A388_RS14150 A388_RS14255 SM00267 diguanylate cyclase A388_RS14265 SM00479 A388_RS14265 A388_RS14320 SM00382 ATPases associated with a variety of cellular activities A388_RS14340 SM00257 Lysin motif A388_RS14345 SM00479 A388_RS14345 A388_RS14400 SM00422 helix_turn_helix, mercury resistance A388_RS14420 SM01011 Aminopeptidase P, N-terminal domain A388_RS14470 SM00382 ATPases associated with a variety of cellular activities A388_RS14470 SM00464 Found in ATP-dependent protease La (LON) A388_RS14490 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A388_RS14500 SM00478 endonuclease III A388_RS14550 SM00988 UreE urease accessory protein, N-terminal domain A388_RS14595 SM01091 Transporter associated domain A388_RS14705 SM00382 ATPases associated with a variety of cellular activities A388_RS14715 SM00947 Carbonic anhydrase A388_RS14775 SM01018 B12 binding domain A388_RS14780 SM00861 Transketolase, pyrimidine binding domain A388_RS14795 SM00822 A388_RS14795 A388_RS14825 SM00342 helix_turn_helix, arabinose operon control protein A388_RS14915 SM00346 helix_turn_helix isocitrate lyase regulation A388_RS14955 SM01322 A388_RS14955 A388_RS15050 SM01130 A388_RS15050 A388_RS15145 SM01040 BRO family, N-terminal domain A388_RS15195 SM01004 Delta-aminolevulinic acid dehydratase A388_RS15240 SM00382 ATPases associated with a variety of cellular activities A388_RS15315 SM00563 Phosphate acyltransferases A388_RS15350 SM00843 A388_RS15350 A388_RS15390 SM00838 Elongation factor G C-terminus A388_RS15390 SM00889 Elongation factor G, domain IV A388_RS15410 SM00825 Beta-ketoacyl synthase A388_RS15470 SM01329 A388_RS15470 A388_RS15520 SM00363 S4 RNA-binding domain A388_RS15530 SM00400 zinc finger A388_RS15530 SM00493 A388_RS15530 A388_RS15540 SM00028 Tetratricopeptide repeats A388_RS15575 SM01400 A388_RS15575 A388_RS15620 SM00257 Lysin motif A388_RS15630 SM00822 A388_RS15630 A388_RS15635 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A388_RS15670 SM00363 S4 RNA-binding domain A388_RS15720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A388_RS15720 SM00292 breast cancer carboxy-terminal domain A388_RS15720 SM00532 Ligase N family A388_RS15725 SM00771 ZipA, C-terminal domain (FtsZ-binding) A388_RS15735 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS15755 SM00382 ATPases associated with a variety of cellular activities A388_RS15755 SM00962 SRP54-type protein, GTPase domain A388_RS15755 SM00963 SRP54-type protein, helical bundle domain A388_RS15910 SM00357 Cold shock protein domain A388_RS15955 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A388_RS15955 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A388_RS15960 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A388_RS15985 SM00267 diguanylate cyclase A388_RS15995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A388_RS15995 SM00387 Histidine kinase-like ATPases A388_RS15995 SM00388 His Kinase A (phosphoacceptor) domain A388_RS16000 SM00448 cheY-homologous receiver domain A388_RS16000 SM00862 Transcriptional regulatory protein, C terminal A388_RS16075 SM00903 Flavin reductase like domain A388_RS16105 SM00342 helix_turn_helix, arabinose operon control protein A388_RS16400 SM00331 Sigma factor PP2C-like phosphatases A388_RS16420 SM00347 helix_turn_helix multiple antibiotic resistance protein A388_RS16430 SM00382 ATPases associated with a variety of cellular activities A388_RS16450 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A388_RS16450 SM00474 3'-5' exonuclease A388_RS16450 SM00475 5'-3' exonuclease A388_RS16450 SM00482 DNA polymerase A domain A388_RS16465 SM00977 TilS substrate C-terminal domain A388_RS16485 SM00357 Cold shock protein domain A388_RS16485 SM00382 ATPases associated with a variety of cellular activities A388_RS16485 SM00959 Rho termination factor, N-terminal domain A388_RS16500 SM00411 bacterial (prokaryotic) histone like domain A388_RS16505 SM00873 B3/4 domain A388_RS16505 SM00874 tRNA synthetase B5 domain A388_RS16505 SM00896 Ferredoxin-fold anticodon binding domain A388_RS16555 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A388_RS16600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A388_RS16615 SM00954 Region found in RelA / SpoT proteins A388_RS16635 SM00073 Histidine Phosphotransfer domain A388_RS16635 SM00387 Histidine kinase-like ATPases A388_RS16635 SM00388 His Kinase A (phosphoacceptor) domain A388_RS16635 SM00448 cheY-homologous receiver domain A388_RS16675 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A388_RS16675 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A388_RS16700 SM00530 Helix-turn-helix XRE-family like proteins A388_RS16720 SM00448 cheY-homologous receiver domain A388_RS16720 SM00862 Transcriptional regulatory protein, C terminal A388_RS16725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A388_RS16725 SM00387 Histidine kinase-like ATPases A388_RS16725 SM00388 His Kinase A (phosphoacceptor) domain A388_RS16730 SM00746 metallochaperone-like domain A388_RS16865 SM01236 A388_RS16865 A388_RS16885 SM00052 Putative diguanylate phosphodiesterase A388_RS16885 SM00267 diguanylate cyclase A388_RS16930 SM00382 ATPases associated with a variety of cellular activities A388_RS16950 SM00479 A388_RS16950 A388_RS16960 SM00450 Rhodanese Homology Domain A388_RS16985 SM00564 beta-propeller repeat A388_RS17010 SM00028 Tetratricopeptide repeats A388_RS17020 SM00562 A388_RS17020 A388_RS17030 SM00014 Acid phosphatase homologues A388_RS17040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A388_RS17040 SM00245 tail specific protease A388_RS17120 SM00382 ATPases associated with a variety of cellular activities A388_RS17120 SM00994 ClpX C4-type zinc finger A388_RS17120 SM01086 C-terminal, D2-small domain, of ClpB protein A388_RS17140 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A388_RS17145 SM00917 LeuA allosteric (dimerisation) domain A388_RS17160 SM00671 Sel1-like repeats. A388_RS17300 SM00360 RNA recognition motif A388_RS17320 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A388_RS17320 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A388_RS17320 SM00493 A388_RS17320 A388_RS17335 SM00829 Enoylreductase A388_RS17345 SM00382 ATPases associated with a variety of cellular activities A388_RS17375 SM00859 Semialdehyde dehydrogenase, NAD binding domain A388_RS17390 SM00870 A388_RS17390 A388_RS17400 SM00342 helix_turn_helix, arabinose operon control protein A388_RS17405 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS17420 SM01329 A388_RS17420 A388_RS17460 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A388_RS17500 SM00363 S4 RNA-binding domain A388_RS17510 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS17540 SM00729 Elongator protein 3, MiaB family, Radical SAM A388_RS17605 SM00849 Metallo-beta-lactamase superfamily A388_RS17645 SM00116 Domain in cystathionine beta-synthase and other proteins. A388_RS17645 SM01091 Transporter associated domain A388_RS17675 SM00487 DEAD-like helicases superfamily A388_RS17675 SM00490 helicase superfamily c-terminal domain A388_RS17695 SM00271 DnaJ molecular chaperone homology domain A388_RS17710 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS17710 SM00322 K homology RNA-binding domain A388_RS17715 SM01387 A388_RS17715 A388_RS17725 SM00382 ATPases associated with a variety of cellular activities A388_RS17830 SM00316 Ribosomal protein S1-like RNA-binding domain A388_RS17890 SM00967 RNA 2'-O ribose methyltransferase substrate binding A388_RS17900 SM00028 Tetratricopeptide repeats A388_RS17915 SM00732 Likely ribonuclease with RNase H fold. A388_RS17940 SM00346 helix_turn_helix isocitrate lyase regulation A388_RS17950 SM00342 helix_turn_helix, arabinose operon control protein A388_RS17965 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A388_RS17965 SM00465 GIY-YIG type nucleases (URI domain) A388_RS18005 SM00422 helix_turn_helix, mercury resistance A388_RS18030 SM00387 Histidine kinase-like ATPases A388_RS18070 SM00663 RNA polymerase I subunit A N-terminus A388_RS18095 SM00649 Ribosomal protein L11/L12 A388_RS18100 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A388_RS18100 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A388_RS18150 SM00240 Forkhead associated domain A388_RS18160 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A388_RS18170 SM00528 Domain in histone-like proteins of HNS family A388_RS18200 SM00448 cheY-homologous receiver domain A388_RS18200 SM00850 LytTr DNA-binding domain A388_RS18290 SM00899 A388_RS18290 A388_RS18320 SM00421 helix_turn_helix, Lux Regulon A388_RS18320 SM00448 cheY-homologous receiver domain A388_RS18325 SM00387 Histidine kinase-like ATPases A388_RS18325 SM00388 His Kinase A (phosphoacceptor) domain A388_RS18330 SM00382 ATPases associated with a variety of cellular activities A388_RS18330 SM00448 cheY-homologous receiver domain A388_RS18335 SM00245 tail specific protease A388_RS18400 SM00938 Nitrogen regulatory protein P-II A388_RS18450 SM00422 helix_turn_helix, mercury resistance A388_RS18585 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS18595 SM00530 Helix-turn-helix XRE-family like proteins A388_RS18640 SM00829 Enoylreductase A388_RS18655 SM00267 diguanylate cyclase A388_RS18685 SM00387 Histidine kinase-like ATPases A388_RS18685 SM00388 His Kinase A (phosphoacceptor) domain A388_RS18685 SM00448 cheY-homologous receiver domain A388_RS18695 SM00421 helix_turn_helix, Lux Regulon A388_RS18695 SM00448 cheY-homologous receiver domain A388_RS18710 SM00344 helix_turn_helix ASNC type A388_RS18750 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A388_RS18780 SM00116 Domain in cystathionine beta-synthase and other proteins. A388_RS18780 SM01240 A388_RS18780 A388_RS18790 SM00849 Metallo-beta-lactamase superfamily A388_RS18835 SM00864 Tubulin/FtsZ family, GTPase domain A388_RS18835 SM00865 Tubulin/FtsZ family, C-terminal domain A388_RS18840 SM00842 Cell division protein FtsA A388_RS18905 SM00267 diguanylate cyclase A388_RS18970 SM00387 Histidine kinase-like ATPases A388_RS18970 SM00433 TopoisomeraseII A388_RS19005 SM00257 Lysin motif A388_RS19060 SM00448 cheY-homologous receiver domain A388_RS19060 SM00862 Transcriptional regulatory protein, C terminal A388_RS19065 SM00387 Histidine kinase-like ATPases A388_RS19065 SM00388 His Kinase A (phosphoacceptor) domain A388_RS19080 SM00450 Rhodanese Homology Domain A388_RS19160 SM00387 Histidine kinase-like ATPases A388_RS19225 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS19225 SM00866 A388_RS19225 A388_RS19235 SM00833 Cobalamin synthesis protein cobW C-terminal domain A388_RS19265 SM00346 helix_turn_helix isocitrate lyase regulation A388_RS19295 SM01130 A388_RS19295 A388_RS19320 SM00382 ATPases associated with a variety of cellular activities A388_RS19350 SM00478 endonuclease III A388_RS19350 SM00525 A388_RS19350 A388_RS19370 SM00829 Enoylreductase A388_RS19375 SM00345 helix_turn_helix gluconate operon transcriptional repressor A388_RS19420 SM00271 DnaJ molecular chaperone homology domain A388_RS19605 SM00671 Sel1-like repeats. A388_RS19610 SM00857 Resolvase, N terminal domain A388_RS19675 SM00530 Helix-turn-helix XRE-family like proteins