locus-tag	class	description
CBI29_RS00005	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CBI29_RS00010	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CBI29_RS00015	COG0596	Alpha beta hydrolase
CBI29_RS00060	COG0488	(ABC) transporter
CBI29_RS00065	COG0586	Pfam SNARE associated Golgi protein
CBI29_RS00075	COG0187	DNA topoisomerase II activity
CBI29_RS00085	COG0592	DNA-directed DNA polymerase activity
CBI29_RS00110	COG0706	membrane insertase activity
CBI29_RS00125	COG1230	cation diffusion facilitator family transporter
CBI29_RS00130	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CBI29_RS00145	COG0402	S-adenosylhomocysteine deaminase activity
CBI29_RS00155	COG0754	glutathionylspermidine amidase activity
CBI29_RS00165	COG0861	Integral membrane protein TerC family
CBI29_RS00170	COG0671	phosphoesterase, PA-phosphatase related
CBI29_RS00180	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CBI29_RS00200	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CBI29_RS00205	COG2951	lytic endotransglycosylase activity
CBI29_RS00255	COG0657	acetylesterase activity
CBI29_RS00260	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CBI29_RS00300	COG1047	Peptidyl-prolyl cis-trans
CBI29_RS00310	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CBI29_RS00315	COG0196	riboflavin kinase activity
CBI29_RS00325	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CBI29_RS00330	COG1309	transcriptional regulator
CBI29_RS00335	COG1116	anion transmembrane transporter activity
CBI29_RS00340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBI29_RS00345	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CBI29_RS00350	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CBI29_RS00355	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CBI29_RS00375	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS00380	COG0546	phosphoglycolate phosphatase activity
CBI29_RS00440	COG3023	N-Acetylmuramoyl-L-alanine amidase
CBI29_RS00445	COG0728	peptidoglycan biosynthetic process
CBI29_RS00475	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CBI29_RS00520	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CBI29_RS00530	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CBI29_RS00545	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CBI29_RS00560	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CBI29_RS00565	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CBI29_RS00575	COG2186	Transcriptional regulator
CBI29_RS00585	COG0277	FAD linked oxidase domain protein
CBI29_RS00590	COG1448	Aminotransferase
CBI29_RS00600	COG1802	Transcriptional regulator
CBI29_RS00615	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CBI29_RS00650	COG3328	transposase activity
CBI29_RS00665	COG0564	pseudouridine synthase activity
CBI29_RS00705	COG0251	oxidation-reduction process
CBI29_RS00710	COG1113	amino acid transport
CBI29_RS00715	COG1113	amino acid transport
CBI29_RS00735	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CBI29_RS00740	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS00745	COG1024	Enoyl-CoA hydratase
CBI29_RS00750	COG1024	Enoyl-CoA hydratase
CBI29_RS00755	COG0477	Major facilitator Superfamily
CBI29_RS00760	COG3916	Acyl-homoserine-lactone synthase
CBI29_RS00770	COG2197	response regulator
CBI29_RS00780	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS00785	COG3321	synthase
CBI29_RS00785	COG0300	oxidoreductase activity
CBI29_RS00785	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CBI29_RS00785	COG4221	oxidoreductase activity
CBI29_RS00805	COG2267	carboxylic ester hydrolase activity
CBI29_RS00825	COG0271	Belongs to the BolA IbaG family
CBI29_RS00835	COG1192	Involved in chromosome partitioning
CBI29_RS00850	COG0586	Pfam SNARE associated Golgi protein
CBI29_RS00855	COG2259	Doxx family
CBI29_RS00860	COG4399	Belongs to the UPF0754 family
CBI29_RS00865	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CBI29_RS00865	COG0519	Catalyzes the synthesis of GMP from XMP
CBI29_RS00910	COG0281	malic enzyme
CBI29_RS00915	COG2837	iron assimilation
CBI29_RS00920	COG1280	lysine exporter protein (LysE YggA)
CBI29_RS00925	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CBI29_RS00930	COG1121	(ABC) transporter
CBI29_RS00995	COG0386	Belongs to the glutathione peroxidase family
CBI29_RS01010	COG1309	transcriptional regulator
CBI29_RS01015	COG0697	spore germination
CBI29_RS01025	COG0758	DNA mediated transformation
CBI29_RS01095	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CBI29_RS01105	COG0655	NAD(P)H dehydrogenase (quinone) activity
CBI29_RS01140	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CBI29_RS01150	COG2814	Major facilitator Superfamily
CBI29_RS01160	COG1253	flavin adenine dinucleotide binding
CBI29_RS01165	COG3012	SEC-C Motif Domain Protein
CBI29_RS01170	COG2860	membrane
CBI29_RS01175	COG0477	Major facilitator Superfamily
CBI29_RS01185	COG0318	PFAM AMP-dependent synthetase and ligase
CBI29_RS01200	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CBI29_RS01215	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CBI29_RS01225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBI29_RS01230	COG0606	chelatase, subunit chli
CBI29_RS01260	COG2072	flavoprotein involved in K transport
CBI29_RS01265	COG0492	ferredoxin-NADP+ reductase activity
CBI29_RS01270	COG0431	NADPH-dependent FMN reductase
CBI29_RS01275	COG0798	PFAM Bile acid sodium symporter
CBI29_RS01285	COG0640	Transcriptional regulator
CBI29_RS01295	COG0589	response to stress
CBI29_RS01300	COG0789	Transcriptional regulator
CBI29_RS01330	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CBI29_RS01425	COG0789	Transcriptional regulator
CBI29_RS01445	COG0697	spore germination
CBI29_RS01515	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CBI29_RS01620	COG0789	Transcriptional regulator
CBI29_RS01650	COG0659	secondary active sulfate transmembrane transporter activity
CBI29_RS01660	COG0606	chelatase, subunit chli
CBI29_RS01670	COG0347	Belongs to the P(II) protein family
CBI29_RS01675	COG0004	ammonium transporteR
CBI29_RS01685	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CBI29_RS01685	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CBI29_RS01725	COG0795	lipopolysaccharide-transporting ATPase activity
CBI29_RS01730	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CBI29_RS01735	COG0793	Belongs to the peptidase S41A family
CBI29_RS01750	COG2197	response regulator
CBI29_RS01760	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CBI29_RS01770	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CBI29_RS01775	COG4974	Belongs to the 'phage' integrase family
CBI29_RS01800	COG0772	Belongs to the SEDS family
CBI29_RS01805	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CBI29_RS01810	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CBI29_RS01815	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CBI29_RS01840	COG0697	spore germination
CBI29_RS01845	COG1538	Outer membrane efflux protein
CBI29_RS01865	COG3275	phosphorelay sensor kinase activity
CBI29_RS01875	COG0181	hydroxymethylbilane synthase activity
CBI29_RS01920	COG1716	ATPase activity
CBI29_RS01925	COG0546	phosphoglycolate phosphatase activity
CBI29_RS02025	COG2056	Na+-H+ antiporter family
CBI29_RS02040	COG0326	Molecular chaperone. Has ATPase activity
CBI29_RS02055	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CBI29_RS02115	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CBI29_RS02120	COG2169	Transcriptional regulator
CBI29_RS02120	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CBI29_RS02150	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CBI29_RS02160	COG0497	DNA recombination
CBI29_RS02175	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CBI29_RS02185	COG0237	dephospho-CoA kinase activity
CBI29_RS02235	COG0195	Participates in both transcription termination and antitermination
CBI29_RS02250	COG1320	monovalent cation:proton antiporter activity
CBI29_RS02255	COG2212	antiporter activity
CBI29_RS02260	COG1863	multisubunit Na H antiporter MnhE subunit
CBI29_RS02265	COG0651	ATP synthesis coupled electron transport
CBI29_RS02270	COG1006	Multisubunit Na H antiporter MnhC subunit
CBI29_RS02275	COG2111	Na H antiporter
CBI29_RS02275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CBI29_RS02290	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CBI29_RS02295	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBI29_RS02310	COG2226	methyltransferase
CBI29_RS02330	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CBI29_RS02335	COG1074	ATP-dependent DNA helicase activity
CBI29_RS02340	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CBI29_RS02345	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CBI29_RS02360	COG0598	Magnesium transport protein CorA
CBI29_RS02365	COG0789	Transcriptional regulator
CBI29_RS02370	COG0484	heat shock protein binding
CBI29_RS02385	COG0475	glutathione-regulated potassium exporter activity
CBI29_RS02385	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CBI29_RS02390	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CBI29_RS02410	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CBI29_RS02420	COG4535	Mg2 and Co2 transporter CorC
CBI29_RS02425	COG0425	Belongs to the sulfur carrier protein TusA family
CBI29_RS02435	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CBI29_RS02435	COG0644	oxidoreductase
CBI29_RS02445	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CBI29_RS02460	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CBI29_RS02465	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CBI29_RS02475	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CBI29_RS02475	COG0493	'glutamate synthase
CBI29_RS02500	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CBI29_RS02515	COG0534	Mate efflux family protein
CBI29_RS02525	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CBI29_RS02530	COG4221	oxidoreductase activity
CBI29_RS02535	COG0583	DNA-binding transcription factor activity
CBI29_RS02550	COG0318	PFAM AMP-dependent synthetase and ligase
CBI29_RS02555	COG1530	ribonuclease E activity
CBI29_RS02570	COG0546	phosphoglycolate phosphatase activity
CBI29_RS02575	COG2378	regulation of single-species biofilm formation
CBI29_RS02580	COG0625	glutathione transferase activity
CBI29_RS02590	COG0583	DNA-binding transcription factor activity
CBI29_RS02645	COG0473	3-isopropylmalate dehydrogenase activity
CBI29_RS02700	COG1301	dicarboxylic acid transport
CBI29_RS02710	COG1560	Kdo2-lipid A biosynthetic process
CBI29_RS02715	COG1280	lysine exporter protein (LysE YggA)
CBI29_RS02720	COG0488	(ABC) transporter
CBI29_RS02725	COG2900	Belongs to the SlyX family
CBI29_RS02735	COG1733	regulation of RNA biosynthetic process
CBI29_RS02760	COG0210	DNA helicase
CBI29_RS02765	COG0724	RNA recognition motif
CBI29_RS02785	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CBI29_RS02785	COG4651	solute:proton antiporter activity
CBI29_RS02810	COG0788	formyltetrahydrofolate deformylase activity
CBI29_RS02910	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CBI29_RS02910	COG2813	Specifically methylates the guanine in position
CBI29_RS02920	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBI29_RS02930	COG4774	siderophore transport
CBI29_RS02940	COG0740	serine-type endopeptidase activity
CBI29_RS02960	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CBI29_RS02960	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CBI29_RS02965	COG0857	belongs to the CobB CobQ family
CBI29_RS02965	COG0280	phosphate acetyltransferase
CBI29_RS02970	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CBI29_RS02980	COG0800	Aldolase
CBI29_RS02990	COG3265	gluconokinase activity
CBI29_RS02995	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS03005	COG2267	carboxylic ester hydrolase activity
CBI29_RS03020	COG0793	Belongs to the peptidase S41A family
CBI29_RS03055	COG1426	Protein conserved in bacteria
CBI29_RS03095	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CBI29_RS03105	COG1162	GTPase activity
CBI29_RS03110	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CBI29_RS03125	COG1538	Outer membrane efflux protein
CBI29_RS03130	COG1136	(ABC) transporter
CBI29_RS03130	COG0577	efflux transmembrane transporter activity
CBI29_RS03135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBI29_RS03160	COG0028	Belongs to the TPP enzyme family
CBI29_RS03165	COG0440	acetolactate synthase activity
CBI29_RS03200	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CBI29_RS03215	COG0084	hydrolase, TatD family'
CBI29_RS03225	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CBI29_RS03235	COG0583	DNA-binding transcription factor activity
CBI29_RS03245	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CBI29_RS03335	COG2205	protein histidine kinase activity
CBI29_RS03350	COG2132	Multicopper oxidase
CBI29_RS03370	COG2814	Major facilitator Superfamily
CBI29_RS03380	COG0697	spore germination
CBI29_RS03410	COG3622	Belongs to the hyi family
CBI29_RS03415	COG2084	Dehydrogenase
CBI29_RS03420	COG1024	Enoyl-CoA hydratase
CBI29_RS03425	COG2205	protein histidine kinase activity
CBI29_RS03425	COG5002	protein histidine kinase activity
CBI29_RS03425	COG0784	Response regulator, receiver
CBI29_RS03445	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CBI29_RS03455	COG3956	TIGRFAM MazG family protein
CBI29_RS03460	COG1555	photosystem II stabilization
CBI29_RS03465	COG0617	tRNA 3'-terminal CCA addition
CBI29_RS03470	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CBI29_RS03490	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CBI29_RS03495	COG3028	Belongs to the UPF0307 family
CBI29_RS03500	COG0318	PFAM AMP-dependent synthetase and ligase
CBI29_RS03515	COG0625	glutathione transferase activity
CBI29_RS03520	COG1238	metal cluster binding
CBI29_RS03555	COG0072	phenylalanine-tRNA ligase activity
CBI29_RS03585	COG0248	Ppx GppA phosphatase
CBI29_RS03595	COG0037	tRNA processing
CBI29_RS03635	COG1764	response to oxidative stress
CBI29_RS03640	COG1846	Transcriptional regulator
CBI29_RS03650	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CBI29_RS03710	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CBI29_RS03715	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CBI29_RS03720	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CBI29_RS03730	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CBI29_RS03780	COG1214	PFAM Peptidase M22, glycoprotease
CBI29_RS03795	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CBI29_RS03805	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CBI29_RS03810	COG0561	phosphatase activity
CBI29_RS03820	COG2132	Multicopper oxidase
CBI29_RS03825	COG3667	copper resistance
CBI29_RS03840	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CBI29_RS03845	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CBI29_RS03850	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CBI29_RS03880	COG1063	alcohol dehydrogenase
CBI29_RS03885	COG0583	DNA-binding transcription factor activity
CBI29_RS03890	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS03895	COG2814	Major facilitator Superfamily
CBI29_RS03900	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBI29_RS03910	COG1053	succinate dehydrogenase
CBI29_RS03915	COG0583	DNA-binding transcription factor activity
CBI29_RS03935	COG0583	DNA-binding transcription factor activity
CBI29_RS03965	COG0583	DNA-binding transcription factor activity
CBI29_RS03980	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBI29_RS03990	COG1309	transcriptional regulator
CBI29_RS04020	COG0384	phenazine biosynthesis protein PhzF
CBI29_RS04030	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CBI29_RS04050	COG0745	RESPONSE REGULATOR receiver
CBI29_RS04090	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CBI29_RS04120	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CBI29_RS04125	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CBI29_RS04150	COG0583	DNA-binding transcription factor activity
CBI29_RS04170	COG0668	transmembrane transport
CBI29_RS04180	COG2081	HI0933 family
CBI29_RS04185	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CBI29_RS04215	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CBI29_RS04215	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CBI29_RS04225	COG0489	protein tyrosine kinase activity
CBI29_RS04280	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CBI29_RS04290	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CBI29_RS04305	COG0730	response to heat
CBI29_RS04315	COG1196	nuclear chromosome segregation
CBI29_RS04335	COG2223	nitrite transmembrane transporter activity
CBI29_RS04340	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CBI29_RS04345	COG1877	trehalose-phosphatase activity
CBI29_RS04350	COG0596	Alpha beta hydrolase
CBI29_RS04350	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CBI29_RS04350	COG2226	methyltransferase
CBI29_RS04365	COG4106	trans-aconitate 2-methyltransferase activity
CBI29_RS04380	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CBI29_RS04385	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CBI29_RS04390	COG0009	L-threonylcarbamoyladenylate synthase
CBI29_RS04395	COG3101	peptidyl-lysine hydroxylation
CBI29_RS04400	COG1399	metal-binding, possibly nucleic acid-binding protein
CBI29_RS04425	COG1652	LysM domain
CBI29_RS04430	COG0351	phosphomethylpyrimidine kinase
CBI29_RS04430	COG0352	thiamine-phosphate diphosphorylase activity
CBI29_RS04430	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CBI29_RS04440	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CBI29_RS04470	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CBI29_RS04500	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CBI29_RS04515	COG0358	DNA primase activity
CBI29_RS04525	COG0564	pseudouridine synthase activity
CBI29_RS04550	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CBI29_RS04570	COG0583	DNA-binding transcription factor activity
CBI29_RS04575	COG0473	3-isopropylmalate dehydrogenase activity
CBI29_RS04585	COG0657	acetylesterase activity
CBI29_RS04595	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS04615	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CBI29_RS04615	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CBI29_RS04630	COG1981	membrane
CBI29_RS04675	COG0456	acetyltransferase
CBI29_RS04685	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CBI29_RS04690	COG0492	ferredoxin-NADP+ reductase activity
CBI29_RS04695	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CBI29_RS04695	COG1674	ftsk spoiiie
CBI29_RS04700	COG1280	lysine exporter protein (LysE YggA)
CBI29_RS04715	COG2894	cell division
CBI29_RS04730	COG0204	Acyl-transferase
CBI29_RS04735	COG2885	chlorophyll binding
CBI29_RS04740	COG0210	DNA helicase
CBI29_RS04750	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CBI29_RS04765	COG0121	glutamine amidotransferase
CBI29_RS04790	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CBI29_RS04795	COG0735	belongs to the Fur family
CBI29_RS04820	COG0420	3'-5' exonuclease activity
CBI29_RS04840	COG1090	epimerase
CBI29_RS04855	COG2050	protein possibly involved in aromatic compounds catabolism
CBI29_RS04865	COG2814	Major facilitator Superfamily
CBI29_RS04870	COG0405	Gamma-glutamyltransferase
CBI29_RS04880	COG0582	viral genome integration into host DNA
CBI29_RS04970	COG0084	hydrolase, TatD family'
CBI29_RS04995	COG0477	Major facilitator Superfamily
CBI29_RS05000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CBI29_RS05010	COG1595	DNA-templated transcription, initiation
CBI29_RS05065	COG0531	amino acid
CBI29_RS05070	COG2040	homocysteine
CBI29_RS05095	COG1309	transcriptional regulator
CBI29_RS05100	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CBI29_RS05105	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CBI29_RS05115	COG1607	acyl-coa hydrolase
CBI29_RS05125	COG0523	cobalamin synthesis protein
CBI29_RS05135	COG4681	YaeQ
CBI29_RS05145	COG0726	polysaccharide deacetylase
CBI29_RS05145	COG1649	PFAM Uncharacterised BCR, COG1649
CBI29_RS05150	COG1215	transferase activity, transferring glycosyl groups
CBI29_RS05160	COG1024	Enoyl-CoA hydratase
CBI29_RS05175	COG1414	Transcriptional regulator
CBI29_RS05195	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS05205	COG0446	pyridine nucleotide-disulphide oxidoreductase
CBI29_RS05210	COG2271	Major facilitator Superfamily
CBI29_RS05220	COG2267	carboxylic ester hydrolase activity
CBI29_RS05225	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS05240	COG0028	Belongs to the TPP enzyme family
CBI29_RS05255	COG0477	Major facilitator Superfamily
CBI29_RS05260	COG0242	peptide deformylase activity
CBI29_RS05265	COG2066	Belongs to the glutaminase family
CBI29_RS05270	COG2207	Transcriptional regulator
CBI29_RS05275	COG2223	nitrite transmembrane transporter activity
CBI29_RS05295	COG0583	DNA-binding transcription factor activity
CBI29_RS05300	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS05305	COG2271	Major facilitator Superfamily
CBI29_RS05310	COG3959	Transketolase, thiamine diphosphate binding domain
CBI29_RS05315	COG3958	Transketolase
CBI29_RS05325	COG0306	phosphate transporter
CBI29_RS05345	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CBI29_RS05395	COG4181	ATPase activity
CBI29_RS05400	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CBI29_RS05430	COG0583	DNA-binding transcription factor activity
CBI29_RS05440	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CBI29_RS05445	COG1773	rubredoxin
CBI29_RS05495	COG2851	Citrate transporter
CBI29_RS05505	COG1253	flavin adenine dinucleotide binding
CBI29_RS05545	COG0804	urea catabolic process
CBI29_RS05555	COG0830	nickel cation binding
CBI29_RS05570	COG0742	ribosomal rna small subunit methyltransferase
CBI29_RS05575	COG0768	penicillin binding
CBI29_RS05600	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CBI29_RS05605	COG2878	Part of a membrane complex involved in electron transport
CBI29_RS05610	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CBI29_RS05620	COG3384	dioxygenase
CBI29_RS05635	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CBI29_RS05675	COG0006	proline dipeptidase activity
CBI29_RS05680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBI29_RS05685	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBI29_RS05705	COG1279	arginine transmembrane transporter activity
CBI29_RS05710	COG0583	DNA-binding transcription factor activity
CBI29_RS05750	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CBI29_RS05755	COG0741	lytic transglycosylase activity
CBI29_RS05755	COG1388	LysM domain
CBI29_RS05755	COG0741	lytic transglycosylase activity
CBI29_RS05755	COG1388	LysM domain
CBI29_RS05765	COG4174	ABC transporter (Permease)
CBI29_RS05770	COG4239	(ABC) transporter, permease
CBI29_RS05775	COG4172	Belongs to the ABC transporter superfamily
CBI29_RS05830	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CBI29_RS05840	COG2203	Gaf domain
CBI29_RS05840	COG3706	GGDEF domain
CBI29_RS05840	COG4251	negative regulation of phosphorylation
CBI29_RS05840	COG5001	Diguanylate cyclase
CBI29_RS05850	COG0446	pyridine nucleotide-disulphide oxidoreductase
CBI29_RS05850	COG1902	pentaerythritol trinitrate reductase activity
CBI29_RS05885	COG3209	COG3209 Rhs family protein
CBI29_RS05925	COG1113	amino acid transport
CBI29_RS05935	COG0531	amino acid
CBI29_RS05955	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS05975	COG1113	amino acid transport
CBI29_RS06005	COG0697	spore germination
CBI29_RS06010	COG2721	sulfolactate sulfo-lyase activity
CBI29_RS06015	COG2271	Major facilitator Superfamily
CBI29_RS06020	COG4948	Mandelate Racemase Muconate Lactonizing
CBI29_RS06030	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS06035	COG2186	Transcriptional regulator
CBI29_RS06060	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS06070	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS06075	COG1024	Enoyl-CoA hydratase
CBI29_RS06080	COG2814	Major facilitator Superfamily
CBI29_RS06095	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CBI29_RS06140	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CBI29_RS06145	COG2072	flavoprotein involved in K transport
CBI29_RS06150	COG0300	oxidoreductase activity
CBI29_RS06160	COG1309	transcriptional regulator
CBI29_RS06165	COG1741	Belongs to the pirin family
CBI29_RS06180	COG2072	flavoprotein involved in K transport
CBI29_RS06190	COG2252	PERMEase
CBI29_RS06195	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CBI29_RS06200	COG3038	cytochrome b561
CBI29_RS06210	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CBI29_RS06220	COG0527	aspartate kinase activity
CBI29_RS06260	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CBI29_RS06340	COG1484	DNA-dependent DNA replication
CBI29_RS06550	COG0592	DNA-directed DNA polymerase activity
CBI29_RS06625	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CBI29_RS06650	COG0582	viral genome integration into host DNA
CBI29_RS06660	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CBI29_RS06670	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CBI29_RS06685	COG0667	Aldo Keto reductase
CBI29_RS06700	COG1765	OsmC-like protein
CBI29_RS06715	COG0542	response to heat
CBI29_RS06750	COG2885	chlorophyll binding
CBI29_RS06760	COG0625	glutathione transferase activity
CBI29_RS06765	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CBI29_RS06785	COG3634	alkyl hydroperoxide reductase activity
CBI29_RS06795	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CBI29_RS06805	COG0450	alkyl hydroperoxide reductase
CBI29_RS06810	COG1643	Atp-dependent helicase
CBI29_RS06825	COG2814	Major facilitator Superfamily
CBI29_RS06830	COG3135	benzoate transporter
CBI29_RS06835	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS06840	COG0633	Ferredoxin
CBI29_RS06840	COG0543	2 iron, 2 sulfur cluster binding
CBI29_RS06850	COG4638	Rieske (2fe-2S)
CBI29_RS06855	COG0583	DNA-binding transcription factor activity
CBI29_RS06910	COG1570	exodeoxyribonuclease VII activity
CBI29_RS06945	COG1280	lysine exporter protein (LysE YggA)
CBI29_RS06950	COG1278	Cold shock
CBI29_RS06990	COG2814	Major facilitator Superfamily
CBI29_RS07065	COG5410	chromosome segregation
CBI29_RS07070	COG3567	Phage-associated protein, HI1409 family
CBI29_RS07090	COG3566	protein conserved in bacteria
CBI29_RS07110	COG5434	Belongs to the glycosyl hydrolase 28 family
CBI29_RS07170	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CBI29_RS07180	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CBI29_RS07185	COG1137	ATPase activity
CBI29_RS07190	COG1538	Outer membrane efflux protein
CBI29_RS07220	COG4122	O-methyltransferase activity
CBI29_RS07230	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CBI29_RS07245	COG1522	sequence-specific DNA binding
CBI29_RS07250	COG5006	permease, DMT superfamily
CBI29_RS07260	COG1560	Kdo2-lipid A biosynthetic process
CBI29_RS07275	COG2814	Major facilitator Superfamily
CBI29_RS07300	COG1250	3-hydroxyacyl-CoA dehydrogenase
CBI29_RS07350	COG3209	COG3209 Rhs family protein
CBI29_RS07370	COG0583	DNA-binding transcription factor activity
CBI29_RS07375	COG1914	H( )-stimulated, divalent metal cation uptake system
CBI29_RS07395	COG4770	biotin carboxylase activity
CBI29_RS07400	COG0038	chloride channel
CBI29_RS07430	COG1309	transcriptional regulator
CBI29_RS07440	COG1063	alcohol dehydrogenase
CBI29_RS07455	COG0439	Biotin carboxylase
CBI29_RS07460	COG2249	NAD(P)H dehydrogenase (quinone) activity
CBI29_RS07465	COG1733	regulation of RNA biosynthetic process
CBI29_RS07475	COG0864	Transcriptional regulator
CBI29_RS07485	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CBI29_RS07490	COG1116	anion transmembrane transporter activity
CBI29_RS07610	COG0590	tRNA wobble adenosine to inosine editing
CBI29_RS07615	COG2807	transmembrane transport
CBI29_RS07630	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CBI29_RS07640	COG0789	Transcriptional regulator
CBI29_RS07655	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CBI29_RS07675	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CBI29_RS07700	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS07705	COG0531	amino acid
CBI29_RS07710	COG1760	l-serine dehydratase
CBI29_RS07715	COG2030	dehydratase
CBI29_RS07715	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS07720	COG3396	Phenylacetate-CoA oxygenase
CBI29_RS07725	COG3460	Phenylacetate-CoA oxygenase
CBI29_RS07730	COG3396	Phenylacetate-CoA oxygenase
CBI29_RS07735	COG2151	metal-sulfur cluster biosynthetic enzyme
CBI29_RS07740	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CBI29_RS07745	COG1024	Enoyl-CoA hydratase
CBI29_RS07750	COG1024	Enoyl-CoA hydratase
CBI29_RS07755	COG1250	3-hydroxyacyl-CoA dehydrogenase
CBI29_RS07760	COG0183	Belongs to the thiolase family
CBI29_RS07765	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
CBI29_RS07770	COG3327	negative regulation of DNA-templated transcription, initiation
CBI29_RS07780	COG2050	protein possibly involved in aromatic compounds catabolism
CBI29_RS07785	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CBI29_RS07790	COG0210	DNA helicase
CBI29_RS07830	COG1278	Cold shock
CBI29_RS07860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBI29_RS07865	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CBI29_RS07870	COG2271	Major facilitator Superfamily
CBI29_RS07875	COG0753	catalase activity
CBI29_RS07880	COG3038	cytochrome b561
CBI29_RS07900	COG2267	carboxylic ester hydrolase activity
CBI29_RS07905	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBI29_RS07910	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CBI29_RS07915	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS07925	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CBI29_RS07935	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS07940	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CBI29_RS07945	COG0583	DNA-binding transcription factor activity
CBI29_RS07955	COG1414	Transcriptional regulator
CBI29_RS07960	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBI29_RS07970	COG1840	ABC-type Fe3 transport system, periplasmic component
CBI29_RS07975	COG3842	ATPase activity
CBI29_RS07990	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CBI29_RS07995	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CBI29_RS08000	COG2814	Major facilitator Superfamily
CBI29_RS08005	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS08010	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CBI29_RS08020	COG1024	Enoyl-CoA hydratase
CBI29_RS08030	COG2814	Major facilitator Superfamily
CBI29_RS08040	COG0183	Belongs to the thiolase family
CBI29_RS08050	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS08055	COG1024	Enoyl-CoA hydratase
CBI29_RS08060	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS08065	COG2814	Major facilitator Superfamily
CBI29_RS08070	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CBI29_RS08075	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CBI29_RS08085	COG2814	Major facilitator Superfamily
CBI29_RS08095	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS08110	COG0583	DNA-binding transcription factor activity
CBI29_RS08120	COG4770	biotin carboxylase activity
CBI29_RS08125	COG1024	Enoyl-CoA hydratase
CBI29_RS08130	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CBI29_RS08135	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS08140	COG1309	transcriptional regulator
CBI29_RS08145	COG0318	PFAM AMP-dependent synthetase and ligase
CBI29_RS08165	COG0583	DNA-binding transcription factor activity
CBI29_RS08215	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS08255	COG2205	protein histidine kinase activity
CBI29_RS08255	COG0784	Response regulator, receiver
CBI29_RS08275	COG0765	amino acid transport
CBI29_RS08280	COG0765	amino acid transport
CBI29_RS08285	COG1126	abc transporter atp-binding protein
CBI29_RS08290	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CBI29_RS08295	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CBI29_RS08310	COG1280	lysine exporter protein (LysE YggA)
CBI29_RS08315	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CBI29_RS08320	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CBI29_RS08325	COG1045	serine acetyltransferase
CBI29_RS08340	COG0583	DNA-binding transcription factor activity
CBI29_RS08345	COG0625	glutathione transferase activity
CBI29_RS08350	COG0625	glutathione transferase activity
CBI29_RS08355	COG0583	DNA-binding transcription factor activity
CBI29_RS08365	COG1346	cytolysis
CBI29_RS08370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBI29_RS08385	COG2814	Major facilitator Superfamily
CBI29_RS08395	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
CBI29_RS08400	COG3052	prosthetic group binding
CBI29_RS08420	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CBI29_RS08440	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBI29_RS08450	COG1294	oxidase, subunit
CBI29_RS08455	COG1271	oxidase subunit
CBI29_RS08480	COG0477	Major facilitator Superfamily
CBI29_RS08490	COG4521	taurine ABC transporter
CBI29_RS08495	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CBI29_RS08500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBI29_RS08505	COG2175	clavaminate synthase activity
CBI29_RS08515	COG1953	Uracil, thiamine, allantoin
CBI29_RS08525	COG0583	DNA-binding transcription factor activity
CBI29_RS08535	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CBI29_RS08550	COG0640	Transcriptional regulator
CBI29_RS08555	COG0798	PFAM Bile acid sodium symporter
CBI29_RS08560	COG0583	DNA-binding transcription factor activity
CBI29_RS08575	COG3634	alkyl hydroperoxide reductase activity
CBI29_RS08610	COG1301	dicarboxylic acid transport
CBI29_RS08615	COG0436	Aminotransferase
CBI29_RS08625	COG0386	Belongs to the glutathione peroxidase family
CBI29_RS08665	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CBI29_RS08690	COG0012	GTP binding
CBI29_RS08695	COG2011	ABC-type metal ion transport system permease component
CBI29_RS08700	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CBI29_RS08710	COG1464	Belongs to the NlpA lipoprotein family
CBI29_RS08740	COG0765	amino acid transport
CBI29_RS08745	COG0765	amino acid transport
CBI29_RS08750	COG1126	abc transporter atp-binding protein
CBI29_RS08760	COG1522	sequence-specific DNA binding
CBI29_RS08775	COG1309	transcriptional regulator
CBI29_RS08795	COG0583	DNA-binding transcription factor activity
CBI29_RS08805	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CBI29_RS08815	COG0697	spore germination
CBI29_RS08845	COG3121	Chaperone
CBI29_RS08850	COG3539	Fimbrial protein
CBI29_RS08875	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CBI29_RS08875	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CBI29_RS08920	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CBI29_RS08930	COG2353	YceI-like domain
CBI29_RS08940	COG3698	Phosphodiester glycosidase
CBI29_RS08955	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CBI29_RS08960	COG0506	proline dehydrogenase activity
CBI29_RS08960	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CBI29_RS08960	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CBI29_RS08970	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CBI29_RS08975	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CBI29_RS08995	COG1132	(ABC) transporter
CBI29_RS09000	COG3122	Protein conserved in bacteria
CBI29_RS09005	COG3619	membrane
CBI29_RS09015	COG0640	Transcriptional regulator
CBI29_RS09025	COG2850	peptidyl-arginine hydroxylation
CBI29_RS09030	COG0424	maF-like protein
CBI29_RS09050	COG0191	fructose-bisphosphate aldolase activity
CBI29_RS09055	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CBI29_RS09070	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CBI29_RS09080	COG1192	Involved in chromosome partitioning
CBI29_RS09085	COG1475	DNA binding
CBI29_RS09090	COG0811	peptide transport
CBI29_RS09100	COG1132	(ABC) transporter
CBI29_RS09105	COG1663	tetraacyldisaccharide 4'-kinase activity
CBI29_RS09125	COG0084	hydrolase, TatD family'
CBI29_RS09190	COG0776	regulation of translation
CBI29_RS09220	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CBI29_RS09225	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CBI29_RS09250	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CBI29_RS09270	COG0339	signal peptide processing
CBI29_RS09280	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CBI29_RS09315	COG0702	epimerase
CBI29_RS09320	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CBI29_RS09340	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CBI29_RS09370	COG0316	Belongs to the HesB IscA family
CBI29_RS09375	COG0822	iron-sulfur transferase activity
CBI29_RS09400	COG0776	regulation of translation
CBI29_RS09405	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CBI29_RS09410	COG2207	Transcriptional regulator
CBI29_RS09415	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CBI29_RS09420	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS09425	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS09440	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CBI29_RS09455	COG2814	Major facilitator Superfamily
CBI29_RS09460	COG4264	IucA IucC family
CBI29_RS09465	COG4264	IucA IucC family
CBI29_RS09475	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CBI29_RS09505	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CBI29_RS09520	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CBI29_RS09525	COG0406	alpha-ribazole phosphatase activity
CBI29_RS09540	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CBI29_RS09545	COG0730	response to heat
CBI29_RS09565	COG4773	Receptor
CBI29_RS09570	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CBI29_RS09625	COG2226	methyltransferase
CBI29_RS09650	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CBI29_RS09685	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CBI29_RS09695	COG0133	tryptophan synthase activity
CBI29_RS09710	COG3706	GGDEF domain
CBI29_RS09725	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CBI29_RS09730	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CBI29_RS09735	COG0022	dehydrogenase e1 component
CBI29_RS09740	COG0508	dehydrogenase complex catalyzes the overall conversion of
CBI29_RS09745	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CBI29_RS09755	COG1063	alcohol dehydrogenase
CBI29_RS09760	COG3781	membrane
CBI29_RS09770	COG3453	Protein conserved in bacteria
CBI29_RS09770	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CBI29_RS09780	COG0730	response to heat
CBI29_RS09795	COG2207	Transcriptional regulator
CBI29_RS09795	COG3708	Transcriptional regulator
CBI29_RS09800	COG1733	regulation of RNA biosynthetic process
CBI29_RS09805	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CBI29_RS09815	COG2188	Transcriptional regulator
CBI29_RS09830	COG4521	taurine ABC transporter
CBI29_RS09835	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBI29_RS09855	COG0477	Major facilitator Superfamily
CBI29_RS09865	COG1027	Aspartate ammonia-lyase
CBI29_RS09880	COG0583	DNA-binding transcription factor activity
CBI29_RS09885	COG0583	DNA-binding transcription factor activity
CBI29_RS09890	COG0183	Belongs to the thiolase family
CBI29_RS09895	COG2031	fatty acid transporter
CBI29_RS09910	COG0583	DNA-binding transcription factor activity
CBI29_RS09920	COG2610	gluconate transmembrane transporter activity
CBI29_RS09925	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS09930	COG2207	Transcriptional regulator
CBI29_RS09945	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS09955	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBI29_RS09970	COG0543	2 iron, 2 sulfur cluster binding
CBI29_RS09970	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CBI29_RS09975	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CBI29_RS09980	COG4638	Rieske (2fe-2S)
CBI29_RS09990	COG0725	ABC transporter, periplasmic molybdate-binding protein
CBI29_RS09995	COG4149	molybdate abc transporter
CBI29_RS10000	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CBI29_RS10010	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS10015	COG1535	isochorismatase
CBI29_RS10015	COG3433	isochorismatase activity
CBI29_RS10080	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CBI29_RS10095	COG0753	catalase activity
CBI29_RS10105	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
CBI29_RS10285	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CBI29_RS10295	COG2072	flavoprotein involved in K transport
CBI29_RS10305	COG1538	Outer membrane efflux protein
CBI29_RS10310	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CBI29_RS10315	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBI29_RS10320	COG0745	RESPONSE REGULATOR receiver
CBI29_RS10325	COG2205	protein histidine kinase activity
CBI29_RS10335	COG2207	Transcriptional regulator
CBI29_RS10350	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS10360	COG1073	alpha beta
CBI29_RS10395	COG0556	nucleotide-excision repair
CBI29_RS10410	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CBI29_RS10470	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CBI29_RS10480	COG2207	Transcriptional regulator
CBI29_RS10485	COG2084	Dehydrogenase
CBI29_RS10495	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CBI29_RS10500	COG0583	DNA-binding transcription factor activity
CBI29_RS10510	COG0129	dihydroxy-acid dehydratase activity
CBI29_RS10515	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS10530	COG1566	PFAM secretion protein HlyD family protein
CBI29_RS10545	COG0583	DNA-binding transcription factor activity
CBI29_RS10560	COG2188	Transcriptional regulator
CBI29_RS10630	COG1473	amidohydrolase
CBI29_RS10640	COG0475	glutathione-regulated potassium exporter activity
CBI29_RS10640	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CBI29_RS10650	COG0583	DNA-binding transcription factor activity
CBI29_RS10655	COG1335	isochorismatase
CBI29_RS10675	COG1902	pentaerythritol trinitrate reductase activity
CBI29_RS10685	COG4689	acetoacetate decarboxylase
CBI29_RS10690	COG4221	oxidoreductase activity
CBI29_RS10700	COG1309	transcriptional regulator
CBI29_RS10740	COG1902	pentaerythritol trinitrate reductase activity
CBI29_RS10740	COG0446	pyridine nucleotide-disulphide oxidoreductase
CBI29_RS10755	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS10775	COG2186	Transcriptional regulator
CBI29_RS10785	COG0583	DNA-binding transcription factor activity
CBI29_RS10790	COG4948	Mandelate Racemase Muconate Lactonizing
CBI29_RS10795	COG4829	muconolactone delta-isomerase
CBI29_RS10805	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CBI29_RS10810	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CBI29_RS10815	COG0183	Belongs to the thiolase family
CBI29_RS10820	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CBI29_RS10830	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS10840	COG3733	amine oxidase
CBI29_RS10850	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBI29_RS10860	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS10870	COG4638	Rieske (2fe-2S)
CBI29_RS10890	COG0154	amidase activity
CBI29_RS10900	COG2814	Major facilitator Superfamily
CBI29_RS10925	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS10930	COG0583	DNA-binding transcription factor activity
CBI29_RS10935	COG1414	Transcriptional regulator
CBI29_RS10950	COG2391	methyltransferase activity
CBI29_RS10960	COG4993	Dehydrogenase
CBI29_RS10965	COG3659	wide pore channel activity
CBI29_RS10970	COG3420	alginic acid biosynthetic process
CBI29_RS10975	COG0710	3-dehydroquinate dehydratase activity
CBI29_RS10980	COG3485	protocatechuate 3,4-dioxygenase
CBI29_RS10985	COG3485	protocatechuate 3,4-dioxygenase
CBI29_RS10990	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CBI29_RS10995	COG2271	Major facilitator Superfamily
CBI29_RS11000	COG0596	Alpha beta hydrolase
CBI29_RS11005	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CBI29_RS11010	COG0183	Belongs to the thiolase family
CBI29_RS11015	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CBI29_RS11020	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CBI29_RS11030	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CBI29_RS11035	COG2323	membrane
CBI29_RS11080	COG1902	pentaerythritol trinitrate reductase activity
CBI29_RS11080	COG0446	pyridine nucleotide-disulphide oxidoreductase
CBI29_RS11105	COG0542	response to heat
CBI29_RS11110	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CBI29_RS11140	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CBI29_RS11145	COG0569	domain protein
CBI29_RS11150	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CBI29_RS11165	COG4774	siderophore transport
CBI29_RS11170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CBI29_RS11180	COG1585	Membrane protein implicated in regulation of membrane protease activity
CBI29_RS11195	COG1294	oxidase, subunit
CBI29_RS11200	COG4890	Cyd operon protein YbgT
CBI29_RS11210	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
CBI29_RS11220	COG0552	protein localization to endoplasmic reticulum
CBI29_RS11245	COG0516	GMP reductase activity
CBI29_RS11245	COG0517	IMP dehydrogenase activity
CBI29_RS11250	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CBI29_RS11255	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CBI29_RS11265	COG0583	DNA-binding transcription factor activity
CBI29_RS11270	COG0024	Methionine aminopeptidase
CBI29_RS11300	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CBI29_RS11300	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CBI29_RS11305	COG1105	Belongs to the carbohydrate kinase PfkB family
CBI29_RS11310	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CBI29_RS11310	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CBI29_RS11310	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CBI29_RS11330	COG3300	MHYT domain
CBI29_RS11330	COG5001	Diguanylate cyclase
CBI29_RS11345	COG2135	peptidase activity
CBI29_RS11350	COG0659	secondary active sulfate transmembrane transporter activity
CBI29_RS11370	COG1113	amino acid transport
CBI29_RS11380	COG1522	sequence-specific DNA binding
CBI29_RS11405	COG1011	Hydrolase
CBI29_RS11410	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CBI29_RS11420	COG2137	regulation of response to DNA damage stimulus
CBI29_RS11435	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CBI29_RS11470	COG0575	Belongs to the CDS family
CBI29_RS11475	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CBI29_RS11500	COG3852	Histidine kinase
CBI29_RS11505	COG2204	response regulator
CBI29_RS11565	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CBI29_RS11570	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CBI29_RS11590	COG0697	spore germination
CBI29_RS11605	COG0303	'Molybdopterin
CBI29_RS11610	COG0315	cyclic pyranopterin monophosphate synthase activity
CBI29_RS11610	COG0521	Mo-molybdopterin cofactor biosynthetic process
CBI29_RS11625	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CBI29_RS11630	COG0243	molybdopterin cofactor binding
CBI29_RS11640	COG0243	molybdopterin cofactor binding
CBI29_RS11645	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CBI29_RS11650	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CBI29_RS11650	COG2146	nitrite reductase [NAD(P)H] activity
CBI29_RS11660	COG0745	RESPONSE REGULATOR receiver
CBI29_RS11665	COG1116	anion transmembrane transporter activity
CBI29_RS11665	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CBI29_RS11680	COG0511	ligase activity, forming carbon-carbon bonds
CBI29_RS11695	COG2814	Major facilitator Superfamily
CBI29_RS11715	COG0069	glutamate synthase activity
CBI29_RS11735	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CBI29_RS11745	COG1454	alcohol dehydrogenase
CBI29_RS11750	COG0824	Thioesterase
CBI29_RS11760	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CBI29_RS11775	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CBI29_RS11780	COG2030	dehydratase
CBI29_RS11790	COG0183	Belongs to the thiolase family
CBI29_RS11800	COG0583	DNA-binding transcription factor activity
CBI29_RS11805	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CBI29_RS11815	COG1522	sequence-specific DNA binding
CBI29_RS11820	COG3135	benzoate transporter
CBI29_RS11830	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CBI29_RS11850	COG0589	response to stress
CBI29_RS11855	COG0488	(ABC) transporter
CBI29_RS11875	COG4773	Receptor
CBI29_RS11905	COG0668	transmembrane transport
CBI29_RS11915	COG1309	transcriptional regulator
CBI29_RS11935	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CBI29_RS11955	COG1605	Chorismate mutase
CBI29_RS11995	COG0308	aminopeptidase N
CBI29_RS12020	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CBI29_RS12025	COG1454	alcohol dehydrogenase
CBI29_RS12045	COG0531	amino acid
CBI29_RS12050	COG4303	Ethanolamine ammonia lyase large subunit
CBI29_RS12055	COG4302	ethanolamine ammonia-lyase activity
CBI29_RS12060	COG0519	Catalyzes the synthesis of GMP from XMP
CBI29_RS12060	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CBI29_RS12065	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CBI29_RS12090	COG0697	spore germination
CBI29_RS12095	COG1923	regulation of RNA biosynthetic process
CBI29_RS12105	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CBI29_RS12110	COG0802	atpase or kinase
CBI29_RS12130	COG1187	pseudouridine synthase activity
CBI29_RS12145	COG0583	DNA-binding transcription factor activity
CBI29_RS12160	COG2814	Major facilitator Superfamily
CBI29_RS12165	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CBI29_RS12195	COG0729	surface antigen
CBI29_RS12215	COG0174	glutamine synthetase
CBI29_RS12220	COG0745	RESPONSE REGULATOR receiver
CBI29_RS12225	COG2205	protein histidine kinase activity
CBI29_RS12235	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CBI29_RS12240	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CBI29_RS12265	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBI29_RS12270	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CBI29_RS12275	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS12290	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CBI29_RS12295	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CBI29_RS12315	COG0583	DNA-binding transcription factor activity
CBI29_RS12335	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CBI29_RS12345	COG3658	cytochrome
CBI29_RS12350	COG1215	transferase activity, transferring glycosyl groups
CBI29_RS12355	COG1649	PFAM Uncharacterised BCR, COG1649
CBI29_RS12355	COG0726	polysaccharide deacetylase
CBI29_RS12380	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CBI29_RS12385	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CBI29_RS12395	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CBI29_RS12420	COG0305	Participates in initiation and elongation during chromosome replication
CBI29_RS12425	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CBI29_RS12435	COG1305	Transglutaminase-like
CBI29_RS12445	COG2308	Evidence 4 Homologs of previously reported genes of
CBI29_RS12475	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CBI29_RS12480	COG0138	bifunctional purine biosynthesis protein purh
CBI29_RS12485	COG0151	Belongs to the GarS family
CBI29_RS12490	COG1464	Belongs to the NlpA lipoprotein family
CBI29_RS12495	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CBI29_RS12500	COG2011	ABC-type metal ion transport system permease component
CBI29_RS12505	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CBI29_RS12515	COG1301	dicarboxylic acid transport
CBI29_RS12545	COG1794	racemase activity, acting on amino acids and derivatives
CBI29_RS12565	COG0745	RESPONSE REGULATOR receiver
CBI29_RS12570	COG0642	Histidine kinase
CBI29_RS12575	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CBI29_RS12585	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CBI29_RS12625	COG2351	hydroxyisourate hydrolase activity
CBI29_RS12635	COG3008	intermembrane lipid transfer
CBI29_RS12635	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CBI29_RS12640	COG2995	paraquat-inducible protein a
CBI29_RS12660	COG0477	Major facilitator Superfamily
CBI29_RS12725	COG2186	Transcriptional regulator
CBI29_RS12740	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS12750	COG0583	DNA-binding transcription factor activity
CBI29_RS12760	COG0786	glutamate:sodium symporter activity
CBI29_RS12765	COG3243	poly(R)-hydroxyalkanoic acid synthase
CBI29_RS12790	COG3111	PFAM Bacterial OB fold (BOF) protein
CBI29_RS12890	COG1610	YqeY-like protein
CBI29_RS12895	COG4783	chaperone-mediated protein folding
CBI29_RS12920	COG1286	toxin biosynthetic process
CBI29_RS12950	COG0778	Nitroreductase
CBI29_RS12960	COG0513	Belongs to the DEAD box helicase family
CBI29_RS12980	COG2363	Small membrane protein
CBI29_RS13005	COG1234	tRNA 3'-trailer cleavage
CBI29_RS13010	COG2195	Cleaves the N-terminal amino acid of tripeptides
CBI29_RS13020	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CBI29_RS13030	COG2819	hydrolase of the alpha beta superfamily
CBI29_RS13035	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS13040	COG1301	dicarboxylic acid transport
CBI29_RS13050	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CBI29_RS13055	COG3139	Protein of unknown function (DUF1315)
CBI29_RS13060	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CBI29_RS13065	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CBI29_RS13075	COG0494	nUDIX hydrolase
CBI29_RS13085	COG0642	Histidine kinase
CBI29_RS13100	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CBI29_RS13110	COG1720	tRNA m6t6A37 methyltransferase activity
CBI29_RS13125	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBI29_RS13130	COG0826	peptidase U32
CBI29_RS13135	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CBI29_RS13150	COG4160	amino acid transport
CBI29_RS13155	COG4215	(ABC) transporter
CBI29_RS13170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBI29_RS13275	COG0739	heme binding
CBI29_RS13400	COG5410	chromosome segregation
CBI29_RS13495	COG0305	Participates in initiation and elongation during chromosome replication
CBI29_RS13560	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CBI29_RS13600	COG0582	viral genome integration into host DNA
CBI29_RS13605	COG1131	(ABC) transporter
CBI29_RS13610	COG0842	Transport permease protein
CBI29_RS13625	COG0772	Belongs to the SEDS family
CBI29_RS13630	COG2951	lytic endotransglycosylase activity
CBI29_RS13655	COG2207	Transcriptional regulator
CBI29_RS13670	COG0052	Belongs to the universal ribosomal protein uS2 family
CBI29_RS13675	COG0024	Methionine aminopeptidase
CBI29_RS13685	COG2223	nitrite transmembrane transporter activity
CBI29_RS13695	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CBI29_RS13700	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CBI29_RS13705	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS13720	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CBI29_RS13725	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CBI29_RS13730	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CBI29_RS13750	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CBI29_RS13755	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CBI29_RS13760	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CBI29_RS13795	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CBI29_RS13805	COG0174	glutamine synthetase
CBI29_RS13820	COG0512	Glutamine amidotransferase of anthranilate synthase
CBI29_RS13825	COG0308	aminopeptidase N
CBI29_RS13855	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CBI29_RS13865	COG0302	gtp cyclohydrolase
CBI29_RS13885	COG3739	integral membrane protein
CBI29_RS13900	COG1169	isochorismate synthase
CBI29_RS13910	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CBI29_RS13915	COG1132	(ABC) transporter
CBI29_RS13920	COG1132	(ABC) transporter
CBI29_RS13935	COG3433	isochorismatase activity
CBI29_RS13935	COG1535	isochorismatase
CBI29_RS13940	COG1021	2,3-dihydroxybenzoate-AMP ligase
CBI29_RS13945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CBI29_RS13955	COG4774	siderophore transport
CBI29_RS13960	COG4607	ABC-type enterochelin transport system periplasmic component
CBI29_RS13965	COG4604	ABC transporter, ATP-binding protein
CBI29_RS13970	COG4605	iron ion homeostasis
CBI29_RS13975	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CBI29_RS13980	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CBI29_RS13995	COG2964	Protein conserved in bacteria
CBI29_RS14005	COG1741	Belongs to the pirin family
CBI29_RS14060	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CBI29_RS14060	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CBI29_RS14065	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CBI29_RS14070	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS14080	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CBI29_RS14085	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CBI29_RS14090	COG0006	proline dipeptidase activity
CBI29_RS14095	COG0583	DNA-binding transcription factor activity
CBI29_RS14105	COG2879	small protein
CBI29_RS14110	COG1966	Carbon starvation protein
CBI29_RS14130	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CBI29_RS14155	COG1067	ATP-dependent peptidase activity
CBI29_RS14160	COG0583	DNA-binding transcription factor activity
CBI29_RS14185	COG1686	Belongs to the peptidase S11 family
CBI29_RS14190	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CBI29_RS14225	COG0616	signal peptide processing
CBI29_RS14230	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CBI29_RS14240	COG0573	inorganic phosphate transmembrane transporter activity
CBI29_RS14245	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CBI29_RS14250	COG1113	amino acid transport
CBI29_RS14255	COG3961	Belongs to the TPP enzyme family
CBI29_RS14260	COG1522	sequence-specific DNA binding
CBI29_RS14270	COG0076	glutamate decarboxylase activity
CBI29_RS14275	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CBI29_RS14285	COG1309	transcriptional regulator
CBI29_RS14300	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CBI29_RS14335	COG0352	thiamine-phosphate diphosphorylase activity
CBI29_RS14360	COG1203	CRISPR-associated helicase, Cas3
CBI29_RS14390	COG0612	Peptidase, M16
CBI29_RS14400	COG1823	symporter activity
CBI29_RS14405	COG0583	DNA-binding transcription factor activity
CBI29_RS14410	COG0477	Major facilitator Superfamily
CBI29_RS14435	COG1187	pseudouridine synthase activity
CBI29_RS14450	COG1686	Belongs to the peptidase S11 family
CBI29_RS14455	COG1252	NADH dehydrogenase
CBI29_RS14465	COG0415	Belongs to the DNA photolyase family
CBI29_RS14480	COG1215	transferase activity, transferring glycosyl groups
CBI29_RS14510	COG2070	2-Nitropropane dioxygenase
CBI29_RS14565	COG0556	nucleotide-excision repair
CBI29_RS14585	COG0436	Aminotransferase
CBI29_RS14615	COG4221	oxidoreductase activity
CBI29_RS14625	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CBI29_RS14630	COG1381	Involved in DNA repair and RecF pathway recombination
CBI29_RS14640	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CBI29_RS14655	COG0681	Belongs to the peptidase S26 family
CBI29_RS14670	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CBI29_RS14690	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CBI29_RS14695	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CBI29_RS14700	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CBI29_RS14710	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CBI29_RS14715	COG4208	sulfate ABC transporter
CBI29_RS14720	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CBI29_RS14725	COG0583	DNA-binding transcription factor activity
CBI29_RS14730	COG4625	pathogenesis
CBI29_RS14745	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CBI29_RS14760	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CBI29_RS14770	COG1056	cytidyltransferase-related domain
CBI29_RS14770	COG1051	belongs to the nudix hydrolase family
CBI29_RS14775	COG1024	Enoyl-CoA hydratase
CBI29_RS14785	COG2814	Major facilitator Superfamily
CBI29_RS14790	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CBI29_RS14790	COG0047	phosphoribosylformylglycinamidine synthase activity
CBI29_RS14810	COG1473	amidohydrolase
CBI29_RS14815	COG0824	Thioesterase
CBI29_RS14835	COG0823	Involved in the tonB-independent uptake of proteins
CBI29_RS14855	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CBI29_RS14890	COG0628	permease
CBI29_RS14900	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CBI29_RS14905	COG0596	Alpha beta hydrolase
CBI29_RS14910	COG0616	signal peptide processing
CBI29_RS14910	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CBI29_RS14920	COG2333	competence protein COMEC
CBI29_RS14920	COG0658	competence protein
CBI29_RS14925	COG1136	(ABC) transporter
CBI29_RS14930	COG4591	ABC-type transport system involved in lipoprotein release permease component
CBI29_RS14960	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBI29_RS14980	COG0463	Glycosyl transferase, family 2
CBI29_RS15010	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CBI29_RS15015	COG1280	lysine exporter protein (LysE YggA)
CBI29_RS15020	COG2267	carboxylic ester hydrolase activity
CBI29_RS15030	COG0019	diaminopimelate decarboxylase activity
CBI29_RS15040	COG1113	amino acid transport
CBI29_RS15055	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CBI29_RS15065	COG3339	Conserved Protein
CBI29_RS15070	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CBI29_RS15075	COG0243	molybdopterin cofactor binding
CBI29_RS15080	COG1929	Belongs to the glycerate kinase type-1 family
CBI29_RS15095	COG0778	Nitroreductase
CBI29_RS15130	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CBI29_RS15145	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CBI29_RS15170	COG0741	lytic transglycosylase activity
CBI29_RS15190	COG0584	glycerophosphoryl diester phosphodiesterase
CBI29_RS15195	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CBI29_RS15220	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CBI29_RS15225	COG1597	lipid kinase activity
CBI29_RS15240	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CBI29_RS15245	COG0477	Major facilitator Superfamily
CBI29_RS15295	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CBI29_RS15300	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CBI29_RS15330	COG0505	Belongs to the CarA family
CBI29_RS15350	COG0589	response to stress
CBI29_RS15365	COG2843	Capsule synthesis protein
CBI29_RS15390	COG2321	neutral zinc metallopeptidase
CBI29_RS15395	COG2354	Protein conserved in bacteria
CBI29_RS15425	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CBI29_RS15450	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CBI29_RS15455	COG1053	succinate dehydrogenase
CBI29_RS15460	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CBI29_RS15465	COG2009	succinate dehydrogenase
CBI29_RS15500	COG2921	Belongs to the UPF0250 family
CBI29_RS15505	COG0321	lipoyl(octanoyl) transferase activity
CBI29_RS15520	COG0531	amino acid
CBI29_RS15530	COG1733	regulation of RNA biosynthetic process
CBI29_RS15535	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CBI29_RS15540	COG1648	precorrin-2 dehydrogenase activity
CBI29_RS15540	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CBI29_RS15555	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CBI29_RS15585	COG0671	phosphoesterase, PA-phosphatase related
CBI29_RS15590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBI29_RS15600	COG1538	Outer membrane efflux protein
CBI29_RS15605	COG0393	Putative heavy-metal-binding
CBI29_RS15610	COG0393	Putative heavy-metal-binding
CBI29_RS15620	COG1028	Short-chain dehydrogenase reductase Sdr
CBI29_RS15630	COG0525	valine-tRNA ligase activity
CBI29_RS15650	COG0583	DNA-binding transcription factor activity
CBI29_RS15660	COG0004	ammonium transporteR
CBI29_RS15670	COG0642	Histidine kinase
CBI29_RS15675	COG0745	RESPONSE REGULATOR receiver
CBI29_RS15680	COG2194	sulfuric ester hydrolase activity
CBI29_RS15700	COG1752	Esterase of the alpha-beta hydrolase superfamily
CBI29_RS15715	COG2315	Protein conserved in bacteria
CBI29_RS15720	COG0142	geranyltranstransferase activity
CBI29_RS15725	COG2828	Protein conserved in bacteria
CBI29_RS15730	COG1113	amino acid transport
CBI29_RS15740	COG0582	viral genome integration into host DNA
CBI29_RS16150	COG2207	Transcriptional regulator
CBI29_RS16175	COG2249	NAD(P)H dehydrogenase (quinone) activity
CBI29_RS16185	COG0560	Phosphoserine phosphatase
CBI29_RS16195	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CBI29_RS16205	COG1530	ribonuclease E activity
CBI29_RS16210	COG0424	maF-like protein
CBI29_RS16215	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CBI29_RS16220	COG1792	Involved in formation and maintenance of cell shape
CBI29_RS16225	COG1077	Cell shape determining protein MreB Mrl
CBI29_RS16230	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CBI29_RS16240	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CBI29_RS16265	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CBI29_RS16270	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CBI29_RS16275	COG1752	Esterase of the alpha-beta hydrolase superfamily
CBI29_RS16280	COG1115	amino acid carrier protein
CBI29_RS16300	COG2814	Major facilitator Superfamily
CBI29_RS16305	COG1289	transmembrane transporter activity
CBI29_RS16315	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CBI29_RS16355	COG1376	ErfK ybiS ycfS ynhG family protein
CBI29_RS16360	COG2832	Protein of unknown function (DUF454)
CBI29_RS16370	COG5510	response to toxic substance
CBI29_RS16385	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CBI29_RS16400	COG0840	transmembrane signaling receptor activity
CBI29_RS16440	COG3422	double-strand break repair
CBI29_RS16445	COG2824	Alkylphosphonate utilization operon protein PhnA
CBI29_RS16450	COG3189	MarR family transcriptional regulator
CBI29_RS16460	COG0354	folic acid binding
CBI29_RS16465	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CBI29_RS16480	COG1902	pentaerythritol trinitrate reductase activity
CBI29_RS16485	COG4772	TonB-dependent receptor
CBI29_RS16490	COG2094	Belongs to the DNA glycosylase MPG family
CBI29_RS16515	COG1217	gtp-binding protein TYPA
CBI29_RS16520	COG2233	PERMEase
CBI29_RS16530	COG0833	amino acid
CBI29_RS16535	COG1690	Belongs to the RtcB family
CBI29_RS16540	COG2885	chlorophyll binding
CBI29_RS16540	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CBI29_RS16550	COG0183	Belongs to the thiolase family
CBI29_RS16570	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CBI29_RS16590	COG2207	Transcriptional regulator
CBI29_RS16595	COG0183	Belongs to the thiolase family
CBI29_RS16615	COG2153	protein acetylation
CBI29_RS16625	COG1272	protein, Hemolysin III
CBI29_RS16630	COG0477	Major facilitator Superfamily
CBI29_RS16645	COG0450	alkyl hydroperoxide reductase
CBI29_RS16665	COG0285	dihydrofolate synthase activity
CBI29_RS16715	COG2096	Adenosyltransferase
CBI29_RS16735	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CBI29_RS16740	COG0745	RESPONSE REGULATOR receiver
CBI29_RS16745	COG2205	protein histidine kinase activity
CBI29_RS16755	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS16760	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS16825	COG0438	transferase activity, transferring glycosyl groups
CBI29_RS16830	COG0463	Glycosyl transferase, family 2
CBI29_RS16835	COG0726	polysaccharide deacetylase
CBI29_RS16855	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CBI29_RS16860	COG2205	protein histidine kinase activity
CBI29_RS16865	COG4695	Portal protein
CBI29_RS17005	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CBI29_RS17020	COG3646	Phage regulatory protein
CBI29_RS17060	COG0629	single-stranded DNA binding
CBI29_RS17065	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CBI29_RS17110	COG1862	Preprotein translocase
CBI29_RS17125	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CBI29_RS17135	COG3781	membrane
CBI29_RS17140	COG0613	PHP domain protein
CBI29_RS17150	COG2350	Protein conserved in bacteria
CBI29_RS17180	COG1607	acyl-coa hydrolase
CBI29_RS17240	COG2199	diguanylate cyclase activity
CBI29_RS17250	COG1408	metallophosphoesterase
CBI29_RS17255	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CBI29_RS17265	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CBI29_RS17285	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CBI29_RS17290	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CBI29_RS17305	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CBI29_RS17315	COG2969	positive regulation of protein catabolic process
CBI29_RS17335	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS17340	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CBI29_RS17355	COG1309	transcriptional regulator
CBI29_RS17360	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS17405	COG1183	phosphatidylcholine synthase activity
CBI29_RS17410	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CBI29_RS17440	COG0741	lytic transglycosylase activity
CBI29_RS17440	COG0739	heme binding
CBI29_RS17440	COG1196	nuclear chromosome segregation
CBI29_RS17450	COG1702	phosphate starvation-inducible protein PhoH
CBI29_RS17485	COG1295	ribonuclease BN
CBI29_RS17490	COG0697	spore germination
CBI29_RS17495	COG2169	Transcriptional regulator
CBI29_RS17500	COG0179	Fumarylacetoacetate (FAA) hydrolase
CBI29_RS17545	COG0557	exoribonuclease II activity
CBI29_RS17550	COG0339	signal peptide processing
CBI29_RS17555	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CBI29_RS17585	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CBI29_RS17590	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS17745	COG0626	cystathionine gamma-synthase activity
CBI29_RS17750	COG0433	COG0433 Predicted ATPase
CBI29_RS17755	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CBI29_RS17755	COG1017	nitric oxide dioxygenase activity
CBI29_RS17760	COG1959	2 iron, 2 sulfur cluster binding
CBI29_RS17775	COG1301	dicarboxylic acid transport
CBI29_RS17780	COG1946	Acyl-CoA thioesterase
CBI29_RS17800	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CBI29_RS17805	COG1040	competence protein
CBI29_RS17810	COG0494	nUDIX hydrolase
CBI29_RS17820	COG0598	Magnesium transport protein CorA
CBI29_RS17830	COG2854	intermembrane phospholipid transfer
CBI29_RS17840	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CBI29_RS17845	COG1127	ABC transporter
CBI29_RS17850	COG0513	Belongs to the DEAD box helicase family
CBI29_RS17870	COG0408	coproporphyrinogen oxidase activity
CBI29_RS17885	COG1960	acyl-CoA dehydrogenase activity
CBI29_RS17895	COG1983	PspC domain protein
CBI29_RS17900	COG0517	IMP dehydrogenase activity
CBI29_RS17950	COG0583	DNA-binding transcription factor activity
CBI29_RS17990	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS18000	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CBI29_RS18005	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CBI29_RS18010	COG0833	amino acid
CBI29_RS18040	COG1192	Involved in chromosome partitioning
CBI29_RS18045	COG0628	permease
CBI29_RS18055	COG1289	transmembrane transporter activity
CBI29_RS18070	COG2249	NAD(P)H dehydrogenase (quinone) activity
CBI29_RS18075	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CBI29_RS18085	COG0277	FAD linked oxidase domain protein
CBI29_RS18090	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CBI29_RS18115	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CBI29_RS18120	COG5380	lipid catabolic process
CBI29_RS18140	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CBI29_RS18190	COG0194	GDP metabolic process
CBI29_RS18200	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CBI29_RS18220	COG3307	-O-antigen
CBI29_RS18235	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CBI29_RS18240	COG1704	LemA family
CBI29_RS18250	COG0493	'glutamate synthase
CBI29_RS18255	COG0070	glutamate synthase
CBI29_RS18255	COG0069	glutamate synthase activity
CBI29_RS18255	COG0067	glutamate synthase
CBI29_RS18305	COG2226	methyltransferase
CBI29_RS18320	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CBI29_RS18325	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CBI29_RS18370	COG0833	amino acid
CBI29_RS18435	COG0488	(ABC) transporter
CBI29_RS18440	COG2873	o-acetylhomoserine
CBI29_RS18445	COG4221	oxidoreductase activity
CBI29_RS18450	COG0659	secondary active sulfate transmembrane transporter activity
CBI29_RS18475	COG0427	acetyl-CoA hydrolase
CBI29_RS18505	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CBI29_RS18545	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CBI29_RS18605	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CBI29_RS18615	COG2249	NAD(P)H dehydrogenase (quinone) activity
CBI29_RS18620	COG1733	regulation of RNA biosynthetic process
CBI29_RS18635	COG1733	regulation of RNA biosynthetic process
CBI29_RS18660	COG0667	Aldo Keto reductase
CBI29_RS18680	COG0583	DNA-binding transcription factor activity
CBI29_RS18685	COG2814	Major facilitator Superfamily
CBI29_RS18715	COG1335	isochorismatase
CBI29_RS18725	COG1012	belongs to the aldehyde dehydrogenase family
CBI29_RS18730	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CBI29_RS18740	COG1113	amino acid transport
CBI29_RS18750	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CBI29_RS18765	COG2814	Major facilitator Superfamily
CBI29_RS18775	COG0352	thiamine-phosphate diphosphorylase activity
CBI29_RS18775	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CBI29_RS18775	COG0351	phosphomethylpyrimidine kinase
CBI29_RS18795	COG1309	transcriptional regulator
CBI29_RS18800	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CBI29_RS18815	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CBI29_RS18825	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CBI29_RS18830	COG3162	membrane
CBI29_RS18835	COG0784	Response regulator, receiver
CBI29_RS18835	COG2198	Histidine kinase
CBI29_RS18835	COG2205	protein histidine kinase activity
CBI29_RS18860	COG1522	sequence-specific DNA binding
CBI29_RS18865	COG1335	isochorismatase
CBI29_RS18870	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CBI29_RS18880	COG0668	transmembrane transport
CBI29_RS18885	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CBI29_RS18890	COG1519	Transferase
CBI29_RS18895	COG1902	pentaerythritol trinitrate reductase activity
CBI29_RS18915	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CBI29_RS18940	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CBI29_RS18940	COG0426	domain, Protein
CBI29_RS18945	COG4774	siderophore transport
CBI29_RS18950	COG2119	membrane
CBI29_RS18960	COG0508	dehydrogenase complex catalyzes the overall conversion of
CBI29_RS18970	COG4942	peptidase
CBI29_RS18985	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CBI29_RS18995	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CBI29_RS19015	COG0189	ligase activity
CBI29_RS19035	COG0708	Exodeoxyribonuclease III
CBI29_RS19040	COG1393	Belongs to the ArsC family
CBI29_RS19055	COG3706	GGDEF domain
CBI29_RS19090	COG2351	hydroxyisourate hydrolase activity
CBI29_RS19095	COG2233	PERMEase
CBI29_RS19105	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CBI29_RS19115	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
CBI29_RS19125	COG3150	esterase
CBI29_RS19155	COG3409	Peptidoglycan-binding domain 1 protein
CBI29_RS19155	COG5632	N-Acetylmuramoyl-L-alanine amidase
CBI29_RS19155	COG1388	LysM domain
CBI29_RS19170	COG2918	glutathione biosynthetic process
CBI29_RS19185	COG2733	membrane
CBI29_RS19190	COG0436	Aminotransferase
CBI29_RS19195	COG0534	Mate efflux family protein
CBI29_RS19285	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CBI29_RS19290	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CBI29_RS19300	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CBI29_RS19330	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CBI29_RS19345	COG0010	Belongs to the arginase family
CBI29_RS19375	COG2188	Transcriptional regulator
CBI29_RS19385	COG0523	cobalamin synthesis protein
CBI29_RS19395	COG1113	amino acid transport
CBI29_RS19405	COG0625	glutathione transferase activity
CBI29_RS19425	COG1683	Conserved Protein
CBI29_RS19430	COG0534	Mate efflux family protein
CBI29_RS19435	COG0385	Bile acid
CBI29_RS19440	COG1335	isochorismatase
CBI29_RS19445	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CBI29_RS19465	COG2116	formate transmembrane transporter activity
CBI29_RS19470	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CBI29_RS19475	COG2133	pyrroloquinoline quinone binding
CBI29_RS19480	COG2983	Belongs to the UPF0260 family
CBI29_RS19500	COG1194	a g-specific adenine glycosylase
CBI29_RS19515	COG2818	Glycosylase
CBI29_RS19520	COG1064	alcohol dehydrogenase
CBI29_RS19525	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CBI29_RS19540	COG0583	DNA-binding transcription factor activity
CBI29_RS19545	COG0656	L-ascorbic acid biosynthetic process
CBI29_RS19550	COG2814	Major facilitator Superfamily
CBI29_RS19585	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CBI29_RS19600	COG2233	PERMEase
CBI29_RS19605	COG0583	DNA-binding transcription factor activity
CBI29_RS19630	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CBI29_RS19640	COG0733	neurotransmitter:sodium symporter activity
CBI29_RS19715	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CBI29_RS19835	COG1525	nuclease
CBI29_RS19900	COG1475	DNA binding
CBI29_RS19920	COG3853	Toxic anion resistance protein (TelA)
CBI29_RS20040	COG0484	heat shock protein binding
CBI29_RS20120	COG0589	response to stress
CBI29_RS20125	COG0659	secondary active sulfate transmembrane transporter activity
CBI29_RS20140	COG1061	Type III restriction enzyme res subunit
CBI29_RS20210	COG0741	lytic transglycosylase activity
CBI29_RS20245	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process