locus-tag	class	description
IX87_RS00085	COG5410	chromosome segregation
IX87_RS00300	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IX87_RS00335	COG3384	dioxygenase
IX87_RS00345	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
IX87_RS00350	COG2878	Part of a membrane complex involved in electron transport
IX87_RS00355	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IX87_RS00375	COG0768	penicillin binding
IX87_RS00380	COG0742	ribosomal rna small subunit methyltransferase
IX87_RS00395	COG0830	nickel cation binding
IX87_RS00405	COG0804	urea catabolic process
IX87_RS00450	COG1253	flavin adenine dinucleotide binding
IX87_RS00465	COG2851	Citrate transporter
IX87_RS00520	COG1773	rubredoxin
IX87_RS00525	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IX87_RS00535	COG0583	DNA-binding transcription factor activity
IX87_RS00565	COG4181	ATPase activity
IX87_RS00610	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IX87_RS00630	COG0306	phosphate transporter
IX87_RS00640	COG3958	Transketolase
IX87_RS00645	COG3959	Transketolase, thiamine diphosphate binding domain
IX87_RS00650	COG2271	Major facilitator Superfamily
IX87_RS00655	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS00660	COG0583	DNA-binding transcription factor activity
IX87_RS00675	COG2223	nitrite transmembrane transporter activity
IX87_RS00680	COG2207	Transcriptional regulator
IX87_RS00685	COG2066	Belongs to the glutaminase family
IX87_RS00690	COG0242	peptide deformylase activity
IX87_RS00695	COG0477	Major facilitator Superfamily
IX87_RS00705	COG0028	Belongs to the TPP enzyme family
IX87_RS00710	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS00720	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS00725	COG2267	carboxylic ester hydrolase activity
IX87_RS00735	COG2271	Major facilitator Superfamily
IX87_RS00750	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS00770	COG1414	Transcriptional regulator
IX87_RS00785	COG1024	Enoyl-CoA hydratase
IX87_RS00795	COG1215	transferase activity, transferring glycosyl groups
IX87_RS00800	COG1649	PFAM Uncharacterised BCR, COG1649
IX87_RS00800	COG0726	polysaccharide deacetylase
IX87_RS00810	COG4681	YaeQ
IX87_RS00820	COG0523	cobalamin synthesis protein
IX87_RS00830	COG1607	acyl-coa hydrolase
IX87_RS00840	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX87_RS00845	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX87_RS00850	COG1309	transcriptional regulator
IX87_RS00885	COG2040	homocysteine
IX87_RS00890	COG0531	amino acid
IX87_RS00945	COG1595	DNA-templated transcription, initiation
IX87_RS00955	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IX87_RS00960	COG0477	Major facilitator Superfamily
IX87_RS00970	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
IX87_RS01070	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IX87_RS01145	COG0592	DNA-directed DNA polymerase activity
IX87_RS01185	COG2026	Addiction module toxin, RelE StbE family
IX87_RS01385	COG1484	DNA-dependent DNA replication
IX87_RS01485	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IX87_RS01535	COG0405	Gamma-glutamyltransferase
IX87_RS01540	COG2814	Major facilitator Superfamily
IX87_RS01550	COG2050	protein possibly involved in aromatic compounds catabolism
IX87_RS01565	COG1090	epimerase
IX87_RS01585	COG0420	3'-5' exonuclease activity
IX87_RS01610	COG0735	belongs to the Fur family
IX87_RS01615	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IX87_RS01635	COG0121	glutamine amidotransferase
IX87_RS01650	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IX87_RS01660	COG0210	DNA helicase
IX87_RS01665	COG2885	chlorophyll binding
IX87_RS01670	COG0204	Acyl-transferase
IX87_RS01685	COG2894	cell division
IX87_RS01700	COG1280	lysine exporter protein (LysE YggA)
IX87_RS01705	COG1674	ftsk spoiiie
IX87_RS01710	COG0492	ferredoxin-NADP+ reductase activity
IX87_RS01715	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
IX87_RS01725	COG0456	acetyltransferase
IX87_RS01780	COG1981	membrane
IX87_RS01795	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IX87_RS01795	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
IX87_RS01815	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS01825	COG0657	acetylesterase activity
IX87_RS01835	COG0473	3-isopropylmalate dehydrogenase activity
IX87_RS01840	COG0583	DNA-binding transcription factor activity
IX87_RS01855	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IX87_RS01865	COG0582	viral genome integration into host DNA
IX87_RS01920	COG1196	nuclear chromosome segregation
IX87_RS01920	COG0741	lytic transglycosylase activity
IX87_RS01920	COG0739	heme binding
IX87_RS02055	COG0305	Participates in initiation and elongation during chromosome replication
IX87_RS02075	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IX87_RS02125	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
IX87_RS02165	COG0776	regulation of translation
IX87_RS02230	COG0084	hydrolase, TatD family'
IX87_RS02250	COG1663	tetraacyldisaccharide 4'-kinase activity
IX87_RS02255	COG1132	(ABC) transporter
IX87_RS02265	COG0811	peptide transport
IX87_RS02270	COG1475	DNA binding
IX87_RS02275	COG1192	Involved in chromosome partitioning
IX87_RS02285	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
IX87_RS02300	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IX87_RS02305	COG0191	fructose-bisphosphate aldolase activity
IX87_RS02325	COG0424	maF-like protein
IX87_RS02330	COG2850	peptidyl-arginine hydroxylation
IX87_RS02340	COG0640	Transcriptional regulator
IX87_RS02350	COG3619	membrane
IX87_RS02355	COG3122	Protein conserved in bacteria
IX87_RS02370	COG1132	(ABC) transporter
IX87_RS02390	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
IX87_RS02395	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IX87_RS02405	COG0506	proline dehydrogenase activity
IX87_RS02405	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
IX87_RS02405	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
IX87_RS02410	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
IX87_RS02425	COG3698	Phosphodiester glycosidase
IX87_RS02435	COG2353	YceI-like domain
IX87_RS02445	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IX87_RS02490	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
IX87_RS02490	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IX87_RS02515	COG3539	Fimbrial protein
IX87_RS02530	COG3121	Chaperone
IX87_RS02555	COG0697	spore germination
IX87_RS02565	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
IX87_RS02575	COG0583	DNA-binding transcription factor activity
IX87_RS02625	COG1309	transcriptional regulator
IX87_RS02640	COG1522	sequence-specific DNA binding
IX87_RS02650	COG1126	abc transporter atp-binding protein
IX87_RS02655	COG0765	amino acid transport
IX87_RS02660	COG0765	amino acid transport
IX87_RS02700	COG1464	Belongs to the NlpA lipoprotein family
IX87_RS02710	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IX87_RS02715	COG2011	ABC-type metal ion transport system permease component
IX87_RS02720	COG0012	GTP binding
IX87_RS02745	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
IX87_RS02770	COG0436	Aminotransferase
IX87_RS02785	COG0386	Belongs to the glutathione peroxidase family
IX87_RS02795	COG0436	Aminotransferase
IX87_RS02800	COG1301	dicarboxylic acid transport
IX87_RS02835	COG3634	alkyl hydroperoxide reductase activity
IX87_RS02850	COG0583	DNA-binding transcription factor activity
IX87_RS02855	COG0798	PFAM Bile acid sodium symporter
IX87_RS02860	COG0640	Transcriptional regulator
IX87_RS02875	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
IX87_RS02890	COG0583	DNA-binding transcription factor activity
IX87_RS02900	COG1953	Uracil, thiamine, allantoin
IX87_RS02910	COG2175	clavaminate synthase activity
IX87_RS02915	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IX87_RS02925	COG4521	taurine ABC transporter
IX87_RS02945	COG0477	Major facilitator Superfamily
IX87_RS02965	COG1271	oxidase subunit
IX87_RS02970	COG1294	oxidase, subunit
IX87_RS02980	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX87_RS03000	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
IX87_RS03020	COG3052	prosthetic group binding
IX87_RS03025	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
IX87_RS03035	COG0583	DNA-binding transcription factor activity
IX87_RS03045	COG2814	Major facilitator Superfamily
IX87_RS03065	COG1346	cytolysis
IX87_RS03075	COG0583	DNA-binding transcription factor activity
IX87_RS03080	COG0625	glutathione transferase activity
IX87_RS03085	COG0625	glutathione transferase activity
IX87_RS03090	COG0583	DNA-binding transcription factor activity
IX87_RS03125	COG1045	serine acetyltransferase
IX87_RS03130	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IX87_RS03135	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IX87_RS03140	COG1280	lysine exporter protein (LysE YggA)
IX87_RS03150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX87_RS03155	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX87_RS03160	COG1126	abc transporter atp-binding protein
IX87_RS03165	COG0765	amino acid transport
IX87_RS03170	COG0765	amino acid transport
IX87_RS03185	COG2205	protein histidine kinase activity
IX87_RS03185	COG0784	Response regulator, receiver
IX87_RS03205	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IX87_RS03225	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS03285	COG0583	DNA-binding transcription factor activity
IX87_RS03305	COG0318	PFAM AMP-dependent synthetase and ligase
IX87_RS03310	COG1309	transcriptional regulator
IX87_RS03315	COG1960	acyl-CoA dehydrogenase activity
IX87_RS03320	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
IX87_RS03325	COG1024	Enoyl-CoA hydratase
IX87_RS03330	COG4770	biotin carboxylase activity
IX87_RS03340	COG0583	DNA-binding transcription factor activity
IX87_RS03355	COG1960	acyl-CoA dehydrogenase activity
IX87_RS03365	COG2814	Major facilitator Superfamily
IX87_RS03375	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
IX87_RS03380	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IX87_RS03385	COG2814	Major facilitator Superfamily
IX87_RS03390	COG1960	acyl-CoA dehydrogenase activity
IX87_RS03395	COG1024	Enoyl-CoA hydratase
IX87_RS03400	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS03405	COG1250	3-hydroxyacyl-CoA dehydrogenase
IX87_RS03410	COG0183	Belongs to the thiolase family
IX87_RS03425	COG1280	lysine exporter protein (LysE YggA)
IX87_RS03430	COG2192	nodulation
IX87_RS03445	COG1024	Enoyl-CoA hydratase
IX87_RS03460	COG1960	acyl-CoA dehydrogenase activity
IX87_RS03465	COG2814	Major facilitator Superfamily
IX87_RS03470	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IX87_RS03475	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
IX87_RS03490	COG3842	ATPase activity
IX87_RS03495	COG1840	ABC-type Fe3 transport system, periplasmic component
IX87_RS03505	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IX87_RS03510	COG1414	Transcriptional regulator
IX87_RS03520	COG0583	DNA-binding transcription factor activity
IX87_RS03525	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IX87_RS03530	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS03540	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
IX87_RS03545	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS03550	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IX87_RS03555	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX87_RS03560	COG2267	carboxylic ester hydrolase activity
IX87_RS03580	COG3038	cytochrome b561
IX87_RS03585	COG0753	catalase activity
IX87_RS03610	COG2050	protein possibly involved in aromatic compounds catabolism
IX87_RS03620	COG3327	negative regulation of DNA-templated transcription, initiation
IX87_RS03625	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
IX87_RS03630	COG0183	Belongs to the thiolase family
IX87_RS03635	COG1250	3-hydroxyacyl-CoA dehydrogenase
IX87_RS03640	COG1024	Enoyl-CoA hydratase
IX87_RS03645	COG1024	Enoyl-CoA hydratase
IX87_RS03650	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IX87_RS03655	COG2151	metal-sulfur cluster biosynthetic enzyme
IX87_RS03660	COG3396	Phenylacetate-CoA oxygenase
IX87_RS03665	COG3460	Phenylacetate-CoA oxygenase
IX87_RS03670	COG3396	Phenylacetate-CoA oxygenase
IX87_RS03675	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS03675	COG2030	dehydratase
IX87_RS03680	COG1760	l-serine dehydratase
IX87_RS03685	COG0531	amino acid
IX87_RS03690	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS03715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IX87_RS03735	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IX87_RS03745	COG0789	Transcriptional regulator
IX87_RS03755	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IX87_RS03770	COG2807	transmembrane transport
IX87_RS03775	COG0590	tRNA wobble adenosine to inosine editing
IX87_RS03890	COG1116	anion transmembrane transporter activity
IX87_RS03895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX87_RS03905	COG0864	Transcriptional regulator
IX87_RS03925	COG1733	regulation of RNA biosynthetic process
IX87_RS03930	COG2249	NAD(P)H dehydrogenase (quinone) activity
IX87_RS03935	COG0439	Biotin carboxylase
IX87_RS03950	COG1063	alcohol dehydrogenase
IX87_RS03985	COG0038	chloride channel
IX87_RS03990	COG4770	biotin carboxylase activity
IX87_RS04010	COG1914	H( )-stimulated, divalent metal cation uptake system
IX87_RS04015	COG0583	DNA-binding transcription factor activity
IX87_RS04080	COG1250	3-hydroxyacyl-CoA dehydrogenase
IX87_RS04105	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IX87_RS04140	COG2814	Major facilitator Superfamily
IX87_RS04150	COG1560	Kdo2-lipid A biosynthetic process
IX87_RS04160	COG5006	permease, DMT superfamily
IX87_RS04165	COG1522	sequence-specific DNA binding
IX87_RS04180	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
IX87_RS04190	COG4122	O-methyltransferase activity
IX87_RS04220	COG1538	Outer membrane efflux protein
IX87_RS04225	COG1137	ATPase activity
IX87_RS04230	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
IX87_RS04240	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
IX87_RS04285	COG2814	Major facilitator Superfamily
IX87_RS04315	COG1278	Cold shock
IX87_RS04320	COG1280	lysine exporter protein (LysE YggA)
IX87_RS04355	COG1570	exodeoxyribonuclease VII activity
IX87_RS04435	COG2871	sodium ion transport
IX87_RS04445	COG0583	DNA-binding transcription factor activity
IX87_RS04450	COG4638	Rieske (2fe-2S)
IX87_RS04455	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
IX87_RS04460	COG0543	2 iron, 2 sulfur cluster binding
IX87_RS04460	COG0633	Ferredoxin
IX87_RS04465	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS04470	COG3135	benzoate transporter
IX87_RS04475	COG2814	Major facilitator Superfamily
IX87_RS04490	COG1643	Atp-dependent helicase
IX87_RS04495	COG0450	alkyl hydroperoxide reductase
IX87_RS04505	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IX87_RS04515	COG3634	alkyl hydroperoxide reductase activity
IX87_RS04535	COG0220	tRNA (guanine-N7-)-methyltransferase activity
IX87_RS04540	COG0625	glutathione transferase activity
IX87_RS04550	COG2885	chlorophyll binding
IX87_RS04585	COG0542	response to heat
IX87_RS04600	COG1765	OsmC-like protein
IX87_RS04610	COG0667	Aldo Keto reductase
IX87_RS04625	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IX87_RS04635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IX87_RS04645	COG0582	viral genome integration into host DNA
IX87_RS04705	COG0739	heme binding
IX87_RS04705	COG0741	lytic transglycosylase activity
IX87_RS04705	COG1196	nuclear chromosome segregation
IX87_RS04715	COG1598	PFAM Uncharacterised protein family UPF0150
IX87_RS04810	COG5410	chromosome segregation
IX87_RS04995	COG0527	aspartate kinase activity
IX87_RS05005	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IX87_RS05015	COG3038	cytochrome b561
IX87_RS05020	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IX87_RS05025	COG2252	PERMEase
IX87_RS05035	COG2072	flavoprotein involved in K transport
IX87_RS05050	COG1741	Belongs to the pirin family
IX87_RS05055	COG1309	transcriptional regulator
IX87_RS05065	COG0300	oxidoreductase activity
IX87_RS05070	COG2072	flavoprotein involved in K transport
IX87_RS05075	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
IX87_RS05125	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IX87_RS05140	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IX87_RS05155	COG2814	Major facilitator Superfamily
IX87_RS05160	COG1024	Enoyl-CoA hydratase
IX87_RS05165	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS05175	COG1960	acyl-CoA dehydrogenase activity
IX87_RS05205	COG4948	Mandelate Racemase Muconate Lactonizing
IX87_RS05215	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS05220	COG2186	Transcriptional regulator
IX87_RS05235	COG4948	Mandelate Racemase Muconate Lactonizing
IX87_RS05240	COG2271	Major facilitator Superfamily
IX87_RS05245	COG2721	sulfolactate sulfo-lyase activity
IX87_RS05260	COG0697	spore germination
IX87_RS05280	COG1113	amino acid transport
IX87_RS05310	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS05330	COG0531	amino acid
IX87_RS05340	COG1113	amino acid transport
IX87_RS05390	COG3209	COG3209 Rhs family protein
IX87_RS05455	COG1902	pentaerythritol trinitrate reductase activity
IX87_RS05455	COG0446	pyridine nucleotide-disulphide oxidoreductase
IX87_RS05465	COG2203	Gaf domain
IX87_RS05465	COG3706	GGDEF domain
IX87_RS05465	COG5001	Diguanylate cyclase
IX87_RS05465	COG4251	negative regulation of phosphorylation
IX87_RS05490	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IX87_RS05510	COG4172	Belongs to the ABC transporter superfamily
IX87_RS05515	COG4239	(ABC) transporter, permease
IX87_RS05520	COG4174	ABC transporter (Permease)
IX87_RS05530	COG1388	LysM domain
IX87_RS05530	COG0741	lytic transglycosylase activity
IX87_RS05530	COG1388	LysM domain
IX87_RS05530	COG0741	lytic transglycosylase activity
IX87_RS05535	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IX87_RS05575	COG0583	DNA-binding transcription factor activity
IX87_RS05580	COG1279	arginine transmembrane transporter activity
IX87_RS05600	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IX87_RS05605	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IX87_RS05610	COG0006	proline dipeptidase activity
IX87_RS05840	COG5410	chromosome segregation
IX87_RS06020	COG0069	glutamate synthase activity
IX87_RS06040	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IX87_RS06050	COG1454	alcohol dehydrogenase
IX87_RS06055	COG0824	Thioesterase
IX87_RS06065	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IX87_RS06080	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
IX87_RS06085	COG2030	dehydratase
IX87_RS06095	COG0183	Belongs to the thiolase family
IX87_RS06105	COG0583	DNA-binding transcription factor activity
IX87_RS06110	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IX87_RS06120	COG1522	sequence-specific DNA binding
IX87_RS06125	COG3135	benzoate transporter
IX87_RS06135	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
IX87_RS06155	COG0589	response to stress
IX87_RS06160	COG0488	(ABC) transporter
IX87_RS06190	COG4773	Receptor
IX87_RS06220	COG0668	transmembrane transport
IX87_RS06230	COG1309	transcriptional regulator
IX87_RS06255	COG1605	Chorismate mutase
IX87_RS06275	COG0308	aminopeptidase N
IX87_RS06300	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IX87_RS06305	COG1454	alcohol dehydrogenase
IX87_RS06325	COG0531	amino acid
IX87_RS06330	COG4303	Ethanolamine ammonia lyase large subunit
IX87_RS06335	COG4302	ethanolamine ammonia-lyase activity
IX87_RS06340	COG0519	Catalyzes the synthesis of GMP from XMP
IX87_RS06340	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IX87_RS06345	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IX87_RS06370	COG0697	spore germination
IX87_RS06375	COG1923	regulation of RNA biosynthetic process
IX87_RS06385	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IX87_RS06390	COG0802	atpase or kinase
IX87_RS06410	COG1187	pseudouridine synthase activity
IX87_RS06425	COG0583	DNA-binding transcription factor activity
IX87_RS06440	COG2814	Major facilitator Superfamily
IX87_RS06445	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IX87_RS06470	COG0729	surface antigen
IX87_RS06500	COG0174	glutamine synthetase
IX87_RS06505	COG0745	RESPONSE REGULATOR receiver
IX87_RS06510	COG2205	protein histidine kinase activity
IX87_RS06520	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
IX87_RS06525	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
IX87_RS06550	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX87_RS06555	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IX87_RS06560	COG1960	acyl-CoA dehydrogenase activity
IX87_RS06590	COG0583	DNA-binding transcription factor activity
IX87_RS06605	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IX87_RS06615	COG3658	cytochrome
IX87_RS06620	COG1215	transferase activity, transferring glycosyl groups
IX87_RS06625	COG1649	PFAM Uncharacterised BCR, COG1649
IX87_RS06625	COG0726	polysaccharide deacetylase
IX87_RS06650	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IX87_RS06655	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
IX87_RS06665	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
IX87_RS06690	COG0305	Participates in initiation and elongation during chromosome replication
IX87_RS06695	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IX87_RS06705	COG1305	Transglutaminase-like
IX87_RS06715	COG2308	Evidence 4 Homologs of previously reported genes of
IX87_RS06745	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
IX87_RS06750	COG0138	bifunctional purine biosynthesis protein purh
IX87_RS06755	COG0151	Belongs to the GarS family
IX87_RS06760	COG1464	Belongs to the NlpA lipoprotein family
IX87_RS06765	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IX87_RS06770	COG2011	ABC-type metal ion transport system permease component
IX87_RS06775	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IX87_RS06785	COG1301	dicarboxylic acid transport
IX87_RS06815	COG1794	racemase activity, acting on amino acids and derivatives
IX87_RS06825	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IX87_RS06825	COG3008	intermembrane lipid transfer
IX87_RS06830	COG2995	paraquat-inducible protein a
IX87_RS06850	COG2985	domain, Protein
IX87_RS06880	COG0477	Major facilitator Superfamily
IX87_RS06955	COG2186	Transcriptional regulator
IX87_RS06965	COG0786	glutamate:sodium symporter activity
IX87_RS06970	COG3243	poly(R)-hydroxyalkanoic acid synthase
IX87_RS06995	COG3111	PFAM Bacterial OB fold (BOF) protein
IX87_RS07100	COG3210	domain, Protein
IX87_RS07100	COG3210	domain, Protein
IX87_RS07105	COG2831	hemolysin activation secretion protein
IX87_RS07160	COG1610	YqeY-like protein
IX87_RS07190	COG1286	toxin biosynthetic process
IX87_RS07220	COG0778	Nitroreductase
IX87_RS07230	COG0513	Belongs to the DEAD box helicase family
IX87_RS07250	COG2363	Small membrane protein
IX87_RS07280	COG1234	tRNA 3'-trailer cleavage
IX87_RS07285	COG2195	Cleaves the N-terminal amino acid of tripeptides
IX87_RS07295	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
IX87_RS07305	COG2819	hydrolase of the alpha beta superfamily
IX87_RS07310	COG1960	acyl-CoA dehydrogenase activity
IX87_RS07315	COG1301	dicarboxylic acid transport
IX87_RS07320	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IX87_RS07325	COG3139	Protein of unknown function (DUF1315)
IX87_RS07330	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
IX87_RS07335	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IX87_RS07345	COG0494	nUDIX hydrolase
IX87_RS07355	COG0642	Histidine kinase
IX87_RS07370	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IX87_RS07380	COG1720	tRNA m6t6A37 methyltransferase activity
IX87_RS07395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX87_RS07400	COG0826	peptidase U32
IX87_RS07405	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IX87_RS07415	COG4598	ABC transporter
IX87_RS07420	COG4160	amino acid transport
IX87_RS07425	COG4215	(ABC) transporter
IX87_RS07440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX87_RS07720	COG0582	viral genome integration into host DNA
IX87_RS07725	COG1131	(ABC) transporter
IX87_RS07730	COG0842	Transport permease protein
IX87_RS07745	COG0772	Belongs to the SEDS family
IX87_RS07750	COG2951	lytic endotransglycosylase activity
IX87_RS07775	COG2207	Transcriptional regulator
IX87_RS07790	COG0052	Belongs to the universal ribosomal protein uS2 family
IX87_RS07795	COG0024	Methionine aminopeptidase
IX87_RS07805	COG2223	nitrite transmembrane transporter activity
IX87_RS07820	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IX87_RS07825	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
IX87_RS07830	COG1960	acyl-CoA dehydrogenase activity
IX87_RS07845	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
IX87_RS07850	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
IX87_RS07855	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IX87_RS07875	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IX87_RS07880	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IX87_RS07885	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IX87_RS07920	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
IX87_RS07930	COG0174	glutamine synthetase
IX87_RS07945	COG0582	viral genome integration into host DNA
IX87_RS08025	COG1598	PFAM Uncharacterised protein family UPF0150
IX87_RS08125	COG5410	chromosome segregation
IX87_RS08220	COG3620	sequence-specific DNA binding
IX87_RS08305	COG0512	Glutamine amidotransferase of anthranilate synthase
IX87_RS08340	COG1529	Aldehyde oxidase and xanthine dehydrogenase
IX87_RS08350	COG0302	gtp cyclohydrolase
IX87_RS08380	COG3739	integral membrane protein
IX87_RS08395	COG1169	isochorismate synthase
IX87_RS08405	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
IX87_RS08410	COG1132	(ABC) transporter
IX87_RS08415	COG1132	(ABC) transporter
IX87_RS08430	COG3433	isochorismatase activity
IX87_RS08430	COG1535	isochorismatase
IX87_RS08435	COG1021	2,3-dihydroxybenzoate-AMP ligase
IX87_RS08440	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IX87_RS08450	COG4774	siderophore transport
IX87_RS08455	COG4607	ABC-type enterochelin transport system periplasmic component
IX87_RS08460	COG4604	ABC transporter, ATP-binding protein
IX87_RS08465	COG4605	iron ion homeostasis
IX87_RS08470	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IX87_RS08475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IX87_RS08490	COG2964	Protein conserved in bacteria
IX87_RS08500	COG1741	Belongs to the pirin family
IX87_RS08535	COG2879	small protein
IX87_RS08540	COG1966	Carbon starvation protein
IX87_RS08560	COG4943	cyclic-guanylate-specific phosphodiesterase activity
IX87_RS08580	COG2211	Major facilitator Superfamily
IX87_RS08585	COG1067	ATP-dependent peptidase activity
IX87_RS08590	COG0583	DNA-binding transcription factor activity
IX87_RS08615	COG1686	Belongs to the peptidase S11 family
IX87_RS08620	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
IX87_RS08660	COG0616	signal peptide processing
IX87_RS08665	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
IX87_RS08675	COG0573	inorganic phosphate transmembrane transporter activity
IX87_RS08680	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
IX87_RS08685	COG1113	amino acid transport
IX87_RS08690	COG3961	Belongs to the TPP enzyme family
IX87_RS08695	COG1522	sequence-specific DNA binding
IX87_RS08705	COG0076	glutamate decarboxylase activity
IX87_RS08710	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IX87_RS08720	COG1309	transcriptional regulator
IX87_RS08735	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IX87_RS08770	COG0352	thiamine-phosphate diphosphorylase activity
IX87_RS08795	COG0612	Peptidase, M16
IX87_RS08805	COG1823	symporter activity
IX87_RS08810	COG0583	DNA-binding transcription factor activity
IX87_RS08815	COG0477	Major facilitator Superfamily
IX87_RS08835	COG1187	pseudouridine synthase activity
IX87_RS08850	COG1686	Belongs to the peptidase S11 family
IX87_RS08855	COG1252	NADH dehydrogenase
IX87_RS08865	COG0415	Belongs to the DNA photolyase family
IX87_RS08880	COG1215	transferase activity, transferring glycosyl groups
IX87_RS08910	COG2070	2-Nitropropane dioxygenase
IX87_RS08975	COG0556	nucleotide-excision repair
IX87_RS08995	COG0436	Aminotransferase
IX87_RS09020	COG4221	oxidoreductase activity
IX87_RS09030	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
IX87_RS09035	COG1381	Involved in DNA repair and RecF pathway recombination
IX87_RS09045	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IX87_RS09060	COG0681	Belongs to the peptidase S26 family
IX87_RS09075	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IX87_RS09095	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IX87_RS09100	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IX87_RS09105	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
IX87_RS09115	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
IX87_RS09120	COG4208	sulfate ABC transporter
IX87_RS09125	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
IX87_RS09130	COG0583	DNA-binding transcription factor activity
IX87_RS09135	COG4625	pathogenesis
IX87_RS09150	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
IX87_RS09165	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
IX87_RS09175	COG1051	belongs to the nudix hydrolase family
IX87_RS09175	COG1056	cytidyltransferase-related domain
IX87_RS09195	COG2814	Major facilitator Superfamily
IX87_RS09200	COG0047	phosphoribosylformylglycinamidine synthase activity
IX87_RS09200	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IX87_RS09220	COG1473	amidohydrolase
IX87_RS09225	COG0824	Thioesterase
IX87_RS09245	COG0823	Involved in the tonB-independent uptake of proteins
IX87_RS09265	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IX87_RS09310	COG0628	permease
IX87_RS09320	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IX87_RS09325	COG0596	Alpha beta hydrolase
IX87_RS09330	COG0616	signal peptide processing
IX87_RS09330	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
IX87_RS09340	COG2333	competence protein COMEC
IX87_RS09340	COG0658	competence protein
IX87_RS09345	COG1136	(ABC) transporter
IX87_RS09350	COG4591	ABC-type transport system involved in lipoprotein release permease component
IX87_RS09380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX87_RS09400	COG0463	Glycosyl transferase, family 2
IX87_RS09430	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IX87_RS09435	COG1280	lysine exporter protein (LysE YggA)
IX87_RS09445	COG0019	diaminopimelate decarboxylase activity
IX87_RS09455	COG1113	amino acid transport
IX87_RS09470	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
IX87_RS09480	COG3339	Conserved Protein
IX87_RS09485	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
IX87_RS09490	COG0243	molybdopterin cofactor binding
IX87_RS09495	COG1929	Belongs to the glycerate kinase type-1 family
IX87_RS09510	COG0778	Nitroreductase
IX87_RS09555	COG3811	Belongs to the UPF0386 family
IX87_RS09565	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IX87_RS09580	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IX87_RS09600	COG0741	lytic transglycosylase activity
IX87_RS09620	COG0584	glycerophosphoryl diester phosphodiesterase
IX87_RS09650	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
IX87_RS09655	COG1597	lipid kinase activity
IX87_RS09670	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IX87_RS09675	COG0477	Major facilitator Superfamily
IX87_RS09725	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
IX87_RS09730	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IX87_RS09755	COG0505	Belongs to the CarA family
IX87_RS09775	COG0589	response to stress
IX87_RS09790	COG2843	Capsule synthesis protein
IX87_RS09835	COG2321	neutral zinc metallopeptidase
IX87_RS09840	COG2354	Protein conserved in bacteria
IX87_RS09860	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IX87_RS09875	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IX87_RS09880	COG1053	succinate dehydrogenase
IX87_RS09885	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
IX87_RS09925	COG2921	Belongs to the UPF0250 family
IX87_RS09930	COG0321	lipoyl(octanoyl) transferase activity
IX87_RS09945	COG0531	amino acid
IX87_RS09955	COG1733	regulation of RNA biosynthetic process
IX87_RS09960	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
IX87_RS09965	COG1648	precorrin-2 dehydrogenase activity
IX87_RS09965	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IX87_RS09980	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
IX87_RS10010	COG0215	cysteine-tRNA ligase activity
IX87_RS10015	COG0671	phosphoesterase, PA-phosphatase related
IX87_RS10020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX87_RS10030	COG1538	Outer membrane efflux protein
IX87_RS10035	COG0393	Putative heavy-metal-binding
IX87_RS10040	COG0393	Putative heavy-metal-binding
IX87_RS10050	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS10060	COG0525	valine-tRNA ligase activity
IX87_RS10080	COG0583	DNA-binding transcription factor activity
IX87_RS10085	COG0004	ammonium transporteR
IX87_RS10095	COG0642	Histidine kinase
IX87_RS10100	COG0745	RESPONSE REGULATOR receiver
IX87_RS10105	COG2194	sulfuric ester hydrolase activity
IX87_RS10125	COG1752	Esterase of the alpha-beta hydrolase superfamily
IX87_RS10140	COG2315	Protein conserved in bacteria
IX87_RS10145	COG0142	geranyltranstransferase activity
IX87_RS10150	COG2828	Protein conserved in bacteria
IX87_RS10155	COG1113	amino acid transport
IX87_RS10165	COG0582	viral genome integration into host DNA
IX87_RS10345	COG0305	Participates in initiation and elongation during chromosome replication
IX87_RS10365	COG3620	sequence-specific DNA binding
IX87_RS10425	COG2207	Transcriptional regulator
IX87_RS10450	COG2249	NAD(P)H dehydrogenase (quinone) activity
IX87_RS10460	COG0560	Phosphoserine phosphatase
IX87_RS10470	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IX87_RS10480	COG1530	ribonuclease E activity
IX87_RS10485	COG0424	maF-like protein
IX87_RS10490	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
IX87_RS10495	COG1792	Involved in formation and maintenance of cell shape
IX87_RS10500	COG1077	Cell shape determining protein MreB Mrl
IX87_RS10505	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IX87_RS10515	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IX87_RS10540	COG3590	peptidase
IX87_RS10560	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
IX87_RS10565	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IX87_RS10570	COG1752	Esterase of the alpha-beta hydrolase superfamily
IX87_RS10575	COG1115	amino acid carrier protein
IX87_RS10590	COG2814	Major facilitator Superfamily
IX87_RS10595	COG1289	transmembrane transporter activity
IX87_RS10605	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
IX87_RS10645	COG1376	ErfK ybiS ycfS ynhG family protein
IX87_RS10650	COG2832	Protein of unknown function (DUF454)
IX87_RS10660	COG5510	response to toxic substance
IX87_RS10680	COG0840	transmembrane signaling receptor activity
IX87_RS10720	COG3422	double-strand break repair
IX87_RS10725	COG2824	Alkylphosphonate utilization operon protein PhnA
IX87_RS10730	COG3189	MarR family transcriptional regulator
IX87_RS10740	COG0354	folic acid binding
IX87_RS10745	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IX87_RS10760	COG1902	pentaerythritol trinitrate reductase activity
IX87_RS10765	COG4772	TonB-dependent receptor
IX87_RS10770	COG2094	Belongs to the DNA glycosylase MPG family
IX87_RS10795	COG1217	gtp-binding protein TYPA
IX87_RS10800	COG2233	PERMEase
IX87_RS10810	COG0833	amino acid
IX87_RS10815	COG1690	Belongs to the RtcB family
IX87_RS10825	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
IX87_RS10825	COG2885	chlorophyll binding
IX87_RS10835	COG0183	Belongs to the thiolase family
IX87_RS10855	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IX87_RS10875	COG2207	Transcriptional regulator
IX87_RS10880	COG0183	Belongs to the thiolase family
IX87_RS10925	COG1272	protein, Hemolysin III
IX87_RS10930	COG0477	Major facilitator Superfamily
IX87_RS10945	COG0450	alkyl hydroperoxide reductase
IX87_RS10965	COG0285	dihydrofolate synthase activity
IX87_RS11010	COG4206	TonB-dependent receptor
IX87_RS11015	COG2096	Adenosyltransferase
IX87_RS11020	COG0584	glycerophosphoryl diester phosphodiesterase
IX87_RS11035	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
IX87_RS11040	COG0745	RESPONSE REGULATOR receiver
IX87_RS11045	COG2205	protein histidine kinase activity
IX87_RS11055	COG1960	acyl-CoA dehydrogenase activity
IX87_RS11060	COG1960	acyl-CoA dehydrogenase activity
IX87_RS11145	COG0438	transferase activity, transferring glycosyl groups
IX87_RS11150	COG0463	Glycosyl transferase, family 2
IX87_RS11155	COG0726	polysaccharide deacetylase
IX87_RS11175	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
IX87_RS11245	COG1862	Preprotein translocase
IX87_RS11255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IX87_RS11260	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IX87_RS11270	COG3781	membrane
IX87_RS11275	COG0613	PHP domain protein
IX87_RS11285	COG2350	Protein conserved in bacteria
IX87_RS11315	COG1607	acyl-coa hydrolase
IX87_RS11375	COG2199	diguanylate cyclase activity
IX87_RS11385	COG1408	metallophosphoesterase
IX87_RS11390	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IX87_RS11400	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IX87_RS11420	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
IX87_RS11425	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
IX87_RS11440	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
IX87_RS11450	COG2969	positive regulation of protein catabolic process
IX87_RS11470	COG1960	acyl-CoA dehydrogenase activity
IX87_RS11475	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
IX87_RS11490	COG1309	transcriptional regulator
IX87_RS11495	COG1960	acyl-CoA dehydrogenase activity
IX87_RS11540	COG1183	phosphatidylcholine synthase activity
IX87_RS11545	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
IX87_RS11575	COG1196	nuclear chromosome segregation
IX87_RS11575	COG0739	heme binding
IX87_RS11575	COG0741	lytic transglycosylase activity
IX87_RS11585	COG1702	phosphate starvation-inducible protein PhoH
IX87_RS11620	COG1295	ribonuclease BN
IX87_RS11625	COG0697	spore germination
IX87_RS11630	COG2169	Transcriptional regulator
IX87_RS11635	COG0179	Fumarylacetoacetate (FAA) hydrolase
IX87_RS11680	COG0557	exoribonuclease II activity
IX87_RS11685	COG0339	signal peptide processing
IX87_RS11690	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
IX87_RS11720	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
IX87_RS11725	COG1960	acyl-CoA dehydrogenase activity
IX87_RS11880	COG0626	cystathionine gamma-synthase activity
IX87_RS11885	COG0433	COG0433 Predicted ATPase
IX87_RS11890	COG1017	nitric oxide dioxygenase activity
IX87_RS11890	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IX87_RS11895	COG1959	2 iron, 2 sulfur cluster binding
IX87_RS11910	COG1301	dicarboxylic acid transport
IX87_RS11915	COG1946	Acyl-CoA thioesterase
IX87_RS11935	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IX87_RS11940	COG1040	competence protein
IX87_RS11945	COG0494	nUDIX hydrolase
IX87_RS11955	COG0598	Magnesium transport protein CorA
IX87_RS11965	COG2854	intermembrane phospholipid transfer
IX87_RS11975	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IX87_RS11980	COG1127	ABC transporter
IX87_RS11990	COG0513	Belongs to the DEAD box helicase family
IX87_RS12010	COG0408	coproporphyrinogen oxidase activity
IX87_RS12035	COG1960	acyl-CoA dehydrogenase activity
IX87_RS12045	COG1983	PspC domain protein
IX87_RS12050	COG0517	IMP dehydrogenase activity
IX87_RS12085	COG1106	Psort location Cytoplasmic, score
IX87_RS12105	COG0583	DNA-binding transcription factor activity
IX87_RS12145	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS12155	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IX87_RS12160	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
IX87_RS12165	COG0833	amino acid
IX87_RS12205	COG1192	Involved in chromosome partitioning
IX87_RS12210	COG0628	permease
IX87_RS12220	COG1289	transmembrane transporter activity
IX87_RS12235	COG2249	NAD(P)H dehydrogenase (quinone) activity
IX87_RS12240	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
IX87_RS12265	COG0277	FAD linked oxidase domain protein
IX87_RS12270	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IX87_RS12295	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IX87_RS12300	COG5380	lipid catabolic process
IX87_RS12320	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IX87_RS12370	COG0194	GDP metabolic process
IX87_RS12380	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IX87_RS12400	COG3307	-O-antigen
IX87_RS12415	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
IX87_RS12420	COG1704	LemA family
IX87_RS12430	COG0493	'glutamate synthase
IX87_RS12435	COG0067	glutamate synthase
IX87_RS12435	COG0069	glutamate synthase activity
IX87_RS12435	COG0070	glutamate synthase
IX87_RS12540	COG2226	methyltransferase
IX87_RS12555	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IX87_RS12560	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IX87_RS12605	COG0833	amino acid
IX87_RS12690	COG0488	(ABC) transporter
IX87_RS12695	COG2873	o-acetylhomoserine
IX87_RS12700	COG4221	oxidoreductase activity
IX87_RS12705	COG0659	secondary active sulfate transmembrane transporter activity
IX87_RS12725	COG0427	acetyl-CoA hydrolase
IX87_RS12755	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
IX87_RS12785	COG2329	Antibiotic biosynthesis monooxygenase
IX87_RS12800	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
IX87_RS12875	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IX87_RS12950	COG2249	NAD(P)H dehydrogenase (quinone) activity
IX87_RS12955	COG1733	regulation of RNA biosynthetic process
IX87_RS12990	COG0667	Aldo Keto reductase
IX87_RS13010	COG0583	DNA-binding transcription factor activity
IX87_RS13015	COG2814	Major facilitator Superfamily
IX87_RS13025	COG1113	amino acid transport
IX87_RS13045	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
IX87_RS13045	COG2508	Transcriptional regulator
IX87_RS13095	COG1335	isochorismatase
IX87_RS13105	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS13110	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IX87_RS13120	COG1113	amino acid transport
IX87_RS13130	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
IX87_RS13145	COG2814	Major facilitator Superfamily
IX87_RS13155	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
IX87_RS13155	COG0352	thiamine-phosphate diphosphorylase activity
IX87_RS13155	COG0351	phosphomethylpyrimidine kinase
IX87_RS13175	COG1309	transcriptional regulator
IX87_RS13180	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
IX87_RS13195	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX87_RS13215	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IX87_RS13220	COG3162	membrane
IX87_RS13225	COG2198	Histidine kinase
IX87_RS13225	COG0784	Response regulator, receiver
IX87_RS13225	COG2205	protein histidine kinase activity
IX87_RS13250	COG1522	sequence-specific DNA binding
IX87_RS13255	COG1335	isochorismatase
IX87_RS13260	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IX87_RS13270	COG0668	transmembrane transport
IX87_RS13275	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IX87_RS13280	COG1519	Transferase
IX87_RS13285	COG1902	pentaerythritol trinitrate reductase activity
IX87_RS13305	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IX87_RS13330	COG0426	domain, Protein
IX87_RS13330	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX87_RS13345	COG4774	siderophore transport
IX87_RS13350	COG2119	membrane
IX87_RS13360	COG0508	dehydrogenase complex catalyzes the overall conversion of
IX87_RS13370	COG4942	peptidase
IX87_RS13385	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IX87_RS13395	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
IX87_RS13415	COG0189	ligase activity
IX87_RS13445	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IX87_RS13460	COG0708	Exodeoxyribonuclease III
IX87_RS13465	COG1393	Belongs to the ArsC family
IX87_RS13480	COG3706	GGDEF domain
IX87_RS13515	COG2351	hydroxyisourate hydrolase activity
IX87_RS13520	COG2233	PERMEase
IX87_RS13530	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IX87_RS13540	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
IX87_RS13550	COG3150	esterase
IX87_RS13600	COG2918	glutathione biosynthetic process
IX87_RS13615	COG2733	membrane
IX87_RS13620	COG0436	Aminotransferase
IX87_RS13625	COG0534	Mate efflux family protein
IX87_RS13710	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
IX87_RS13715	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IX87_RS13725	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
IX87_RS13730	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
IX87_RS13745	COG0010	Belongs to the arginase family
IX87_RS13775	COG2188	Transcriptional regulator
IX87_RS13785	COG0523	cobalamin synthesis protein
IX87_RS13795	COG1113	amino acid transport
IX87_RS13805	COG0625	glutathione transferase activity
IX87_RS13825	COG1683	Conserved Protein
IX87_RS13830	COG0534	Mate efflux family protein
IX87_RS13835	COG0385	Bile acid
IX87_RS13840	COG1335	isochorismatase
IX87_RS13845	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IX87_RS13865	COG2116	formate transmembrane transporter activity
IX87_RS13870	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IX87_RS13875	COG2133	pyrroloquinoline quinone binding
IX87_RS13880	COG2983	Belongs to the UPF0260 family
IX87_RS13900	COG1194	a g-specific adenine glycosylase
IX87_RS13915	COG2818	Glycosylase
IX87_RS13920	COG1064	alcohol dehydrogenase
IX87_RS13925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX87_RS13935	COG0583	DNA-binding transcription factor activity
IX87_RS13940	COG0656	L-ascorbic acid biosynthetic process
IX87_RS13945	COG2814	Major facilitator Superfamily
IX87_RS13980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX87_RS13995	COG2233	PERMEase
IX87_RS14000	COG0583	DNA-binding transcription factor activity
IX87_RS14035	COG0733	neurotransmitter:sodium symporter activity
IX87_RS14075	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IX87_RS14080	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
IX87_RS14085	COG0596	Alpha beta hydrolase
IX87_RS14110	COG0488	(ABC) transporter
IX87_RS14115	COG0586	Pfam SNARE associated Golgi protein
IX87_RS14125	COG0187	DNA topoisomerase II activity
IX87_RS14135	COG0592	DNA-directed DNA polymerase activity
IX87_RS14160	COG0706	membrane insertase activity
IX87_RS14175	COG1230	cation diffusion facilitator family transporter
IX87_RS14210	COG0402	S-adenosylhomocysteine deaminase activity
IX87_RS14220	COG0754	glutathionylspermidine amidase activity
IX87_RS14230	COG0861	Integral membrane protein TerC family
IX87_RS14235	COG0671	phosphoesterase, PA-phosphatase related
IX87_RS14245	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IX87_RS14265	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IX87_RS14270	COG2951	lytic endotransglycosylase activity
IX87_RS14300	COG0583	DNA-binding transcription factor activity
IX87_RS14320	COG0657	acetylesterase activity
IX87_RS14325	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IX87_RS14365	COG1047	Peptidyl-prolyl cis-trans
IX87_RS14375	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IX87_RS14380	COG0196	riboflavin kinase activity
IX87_RS14390	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IX87_RS14395	COG1309	transcriptional regulator
IX87_RS14400	COG1116	anion transmembrane transporter activity
IX87_RS14405	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IX87_RS14410	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IX87_RS14415	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IX87_RS14420	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IX87_RS14440	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS14445	COG0546	phosphoglycolate phosphatase activity
IX87_RS14500	COG3023	N-Acetylmuramoyl-L-alanine amidase
IX87_RS14505	COG0728	peptidoglycan biosynthetic process
IX87_RS14535	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
IX87_RS14590	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IX87_RS14605	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
IX87_RS14610	COG1210	Utp--glucose-1-phosphate uridylyltransferase
IX87_RS14625	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
IX87_RS14630	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IX87_RS14640	COG2186	Transcriptional regulator
IX87_RS14650	COG0277	FAD linked oxidase domain protein
IX87_RS14655	COG1448	Aminotransferase
IX87_RS14660	COG1802	Transcriptional regulator
IX87_RS14675	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
IX87_RS14690	COG1051	belongs to the nudix hydrolase family
IX87_RS14720	COG0564	pseudouridine synthase activity
IX87_RS14760	COG0251	oxidation-reduction process
IX87_RS14765	COG1113	amino acid transport
IX87_RS14770	COG1113	amino acid transport
IX87_RS14790	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IX87_RS14795	COG1960	acyl-CoA dehydrogenase activity
IX87_RS14800	COG1024	Enoyl-CoA hydratase
IX87_RS14805	COG1024	Enoyl-CoA hydratase
IX87_RS14810	COG0477	Major facilitator Superfamily
IX87_RS14815	COG3916	Acyl-homoserine-lactone synthase
IX87_RS14825	COG2197	response regulator
IX87_RS14845	COG1960	acyl-CoA dehydrogenase activity
IX87_RS14850	COG0318	PFAM AMP-dependent synthetase and ligase
IX87_RS14850	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IX87_RS14850	COG0300	oxidoreductase activity
IX87_RS14850	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS14850	COG3321	synthase
IX87_RS14890	COG0271	Belongs to the BolA IbaG family
IX87_RS14900	COG1192	Involved in chromosome partitioning
IX87_RS14915	COG0586	Pfam SNARE associated Golgi protein
IX87_RS14920	COG2259	Doxx family
IX87_RS14925	COG4399	Belongs to the UPF0754 family
IX87_RS14930	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IX87_RS14930	COG0519	Catalyzes the synthesis of GMP from XMP
IX87_RS14975	COG0281	malic enzyme
IX87_RS14980	COG2837	iron assimilation
IX87_RS14985	COG1280	lysine exporter protein (LysE YggA)
IX87_RS14990	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IX87_RS14995	COG1121	(ABC) transporter
IX87_RS15060	COG0386	Belongs to the glutathione peroxidase family
IX87_RS15075	COG1309	transcriptional regulator
IX87_RS15080	COG0697	spore germination
IX87_RS15090	COG0758	DNA mediated transformation
IX87_RS15125	COG1309	transcriptional regulator
IX87_RS15160	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IX87_RS15170	COG0655	NAD(P)H dehydrogenase (quinone) activity
IX87_RS15205	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IX87_RS15215	COG2814	Major facilitator Superfamily
IX87_RS15235	COG1253	flavin adenine dinucleotide binding
IX87_RS15240	COG3012	SEC-C Motif Domain Protein
IX87_RS15245	COG2860	membrane
IX87_RS15250	COG0477	Major facilitator Superfamily
IX87_RS15260	COG0318	PFAM AMP-dependent synthetase and ligase
IX87_RS15275	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
IX87_RS15300	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IX87_RS15310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX87_RS15315	COG0606	chelatase, subunit chli
IX87_RS15325	COG0347	Belongs to the P(II) protein family
IX87_RS15330	COG0004	ammonium transporteR
IX87_RS15340	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IX87_RS15340	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IX87_RS15380	COG0795	lipopolysaccharide-transporting ATPase activity
IX87_RS15385	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IX87_RS15390	COG0793	Belongs to the peptidase S41A family
IX87_RS15420	COG2197	response regulator
IX87_RS15430	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
IX87_RS15440	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IX87_RS15445	COG4974	Belongs to the 'phage' integrase family
IX87_RS15470	COG0772	Belongs to the SEDS family
IX87_RS15475	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IX87_RS15480	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
IX87_RS15485	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
IX87_RS15510	COG0697	spore germination
IX87_RS15515	COG1538	Outer membrane efflux protein
IX87_RS15535	COG3275	phosphorelay sensor kinase activity
IX87_RS15545	COG0181	hydroxymethylbilane synthase activity
IX87_RS15590	COG1716	ATPase activity
IX87_RS15595	COG0546	phosphoglycolate phosphatase activity
IX87_RS15690	COG0596	Alpha beta hydrolase
IX87_RS15695	COG2056	Na+-H+ antiporter family
IX87_RS15710	COG0326	Molecular chaperone. Has ATPase activity
IX87_RS15725	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
IX87_RS15800	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IX87_RS15805	COG2169	Transcriptional regulator
IX87_RS15805	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IX87_RS15835	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IX87_RS15845	COG0497	DNA recombination
IX87_RS15860	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IX87_RS15870	COG0237	dephospho-CoA kinase activity
IX87_RS15920	COG0195	Participates in both transcription termination and antitermination
IX87_RS15935	COG1320	monovalent cation:proton antiporter activity
IX87_RS15940	COG2212	antiporter activity
IX87_RS15945	COG1863	multisubunit Na H antiporter MnhE subunit
IX87_RS15950	COG0651	ATP synthesis coupled electron transport
IX87_RS15955	COG1006	Multisubunit Na H antiporter MnhC subunit
IX87_RS15960	COG2111	Na H antiporter
IX87_RS15960	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
IX87_RS15975	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
IX87_RS15985	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
IX87_RS15995	COG2226	methyltransferase
IX87_RS16015	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
IX87_RS16020	COG1074	ATP-dependent DNA helicase activity
IX87_RS16025	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IX87_RS16030	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
IX87_RS16045	COG0598	Magnesium transport protein CorA
IX87_RS16050	COG0789	Transcriptional regulator
IX87_RS16055	COG0484	heat shock protein binding
IX87_RS16070	COG0475	glutathione-regulated potassium exporter activity
IX87_RS16070	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IX87_RS16075	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IX87_RS16095	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IX87_RS16105	COG4535	Mg2 and Co2 transporter CorC
IX87_RS16110	COG0425	Belongs to the sulfur carrier protein TusA family
IX87_RS16115	COG0644	oxidoreductase
IX87_RS16115	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
IX87_RS16125	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
IX87_RS16140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IX87_RS16145	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
IX87_RS16155	COG0493	'glutamate synthase
IX87_RS16155	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
IX87_RS16180	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
IX87_RS16195	COG0534	Mate efflux family protein
IX87_RS16205	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IX87_RS16210	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS16215	COG0583	DNA-binding transcription factor activity
IX87_RS16230	COG0318	PFAM AMP-dependent synthetase and ligase
IX87_RS16235	COG1530	ribonuclease E activity
IX87_RS16245	COG0546	phosphoglycolate phosphatase activity
IX87_RS16250	COG2378	regulation of single-species biofilm formation
IX87_RS16255	COG0625	glutathione transferase activity
IX87_RS16335	COG0473	3-isopropylmalate dehydrogenase activity
IX87_RS16390	COG1301	dicarboxylic acid transport
IX87_RS16400	COG1560	Kdo2-lipid A biosynthetic process
IX87_RS16405	COG1280	lysine exporter protein (LysE YggA)
IX87_RS16410	COG0488	(ABC) transporter
IX87_RS16415	COG2900	Belongs to the SlyX family
IX87_RS16425	COG1733	regulation of RNA biosynthetic process
IX87_RS16450	COG0210	DNA helicase
IX87_RS16455	COG0724	RNA recognition motif
IX87_RS16475	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IX87_RS16475	COG4651	solute:proton antiporter activity
IX87_RS16530	COG0788	formyltetrahydrofolate deformylase activity
IX87_RS16630	COG2813	Specifically methylates the guanine in position
IX87_RS16630	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IX87_RS16640	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
IX87_RS16650	COG4774	siderophore transport
IX87_RS16660	COG0740	serine-type endopeptidase activity
IX87_RS16680	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
IX87_RS16680	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
IX87_RS16685	COG0857	belongs to the CobB CobQ family
IX87_RS16685	COG0280	phosphate acetyltransferase
IX87_RS16690	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IX87_RS16700	COG0800	Aldolase
IX87_RS16710	COG3265	gluconokinase activity
IX87_RS16715	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS16725	COG2267	carboxylic ester hydrolase activity
IX87_RS16740	COG0793	Belongs to the peptidase S41A family
IX87_RS16775	COG1426	Protein conserved in bacteria
IX87_RS16815	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IX87_RS16825	COG1162	GTPase activity
IX87_RS16830	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
IX87_RS16845	COG1538	Outer membrane efflux protein
IX87_RS16850	COG1136	(ABC) transporter
IX87_RS16850	COG0577	efflux transmembrane transporter activity
IX87_RS16855	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX87_RS16880	COG0028	Belongs to the TPP enzyme family
IX87_RS16885	COG0440	acetolactate synthase activity
IX87_RS16935	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IX87_RS16950	COG0084	hydrolase, TatD family'
IX87_RS16965	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
IX87_RS16970	COG0583	DNA-binding transcription factor activity
IX87_RS16980	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IX87_RS16985	COG2814	Major facilitator Superfamily
IX87_RS16995	COG0697	spore germination
IX87_RS17025	COG3622	Belongs to the hyi family
IX87_RS17030	COG2084	Dehydrogenase
IX87_RS17035	COG1024	Enoyl-CoA hydratase
IX87_RS17040	COG5002	protein histidine kinase activity
IX87_RS17040	COG0784	Response regulator, receiver
IX87_RS17040	COG2205	protein histidine kinase activity
IX87_RS17060	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IX87_RS17070	COG3956	TIGRFAM MazG family protein
IX87_RS17075	COG1555	photosystem II stabilization
IX87_RS17080	COG0617	tRNA 3'-terminal CCA addition
IX87_RS17085	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IX87_RS17105	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX87_RS17110	COG3028	Belongs to the UPF0307 family
IX87_RS17115	COG0318	PFAM AMP-dependent synthetase and ligase
IX87_RS17130	COG0625	glutathione transferase activity
IX87_RS17135	COG1238	metal cluster binding
IX87_RS17180	COG0072	phenylalanine-tRNA ligase activity
IX87_RS17205	COG0248	Ppx GppA phosphatase
IX87_RS17215	COG0037	tRNA processing
IX87_RS17255	COG1764	response to oxidative stress
IX87_RS17260	COG1846	Transcriptional regulator
IX87_RS17270	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IX87_RS17330	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IX87_RS17335	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
IX87_RS17340	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
IX87_RS17400	COG1214	PFAM Peptidase M22, glycoprotease
IX87_RS17415	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
IX87_RS17425	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
IX87_RS17430	COG0561	phosphatase activity
IX87_RS17440	COG2132	Multicopper oxidase
IX87_RS17460	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IX87_RS17465	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
IX87_RS17470	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
IX87_RS17500	COG1063	alcohol dehydrogenase
IX87_RS17505	COG0583	DNA-binding transcription factor activity
IX87_RS17510	COG1960	acyl-CoA dehydrogenase activity
IX87_RS17515	COG2814	Major facilitator Superfamily
IX87_RS17520	COG1804	L-carnitine dehydratase bile acid-inducible protein F
IX87_RS17530	COG1053	succinate dehydrogenase
IX87_RS17535	COG0583	DNA-binding transcription factor activity
IX87_RS17550	COG0583	DNA-binding transcription factor activity
IX87_RS17605	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX87_RS17660	COG0384	phenazine biosynthesis protein PhzF
IX87_RS17670	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IX87_RS17690	COG0745	RESPONSE REGULATOR receiver
IX87_RS17760	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
IX87_RS17790	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
IX87_RS17795	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IX87_RS17815	COG0583	DNA-binding transcription factor activity
IX87_RS17835	COG0668	transmembrane transport
IX87_RS17845	COG2081	HI0933 family
IX87_RS17850	COG2515	1-aminocyclopropane-1-carboxylate deaminase
IX87_RS17880	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IX87_RS17880	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IX87_RS17890	COG0489	protein tyrosine kinase activity
IX87_RS17940	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IX87_RS17950	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IX87_RS17965	COG0730	response to heat
IX87_RS17985	COG1196	nuclear chromosome segregation
IX87_RS18005	COG2223	nitrite transmembrane transporter activity
IX87_RS18010	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
IX87_RS18015	COG1877	trehalose-phosphatase activity
IX87_RS18020	COG2226	methyltransferase
IX87_RS18020	COG0596	Alpha beta hydrolase
IX87_RS18020	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IX87_RS18035	COG4106	trans-aconitate 2-methyltransferase activity
IX87_RS18050	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IX87_RS18055	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
IX87_RS18060	COG0009	L-threonylcarbamoyladenylate synthase
IX87_RS18065	COG3101	peptidyl-lysine hydroxylation
IX87_RS18070	COG1399	metal-binding, possibly nucleic acid-binding protein
IX87_RS18095	COG1652	LysM domain
IX87_RS18100	COG0351	phosphomethylpyrimidine kinase
IX87_RS18100	COG0352	thiamine-phosphate diphosphorylase activity
IX87_RS18100	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
IX87_RS18110	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IX87_RS18140	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IX87_RS18170	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
IX87_RS18185	COG0358	DNA primase activity
IX87_RS18195	COG0564	pseudouridine synthase activity
IX87_RS18285	COG0305	Participates in initiation and elongation during chromosome replication
IX87_RS18410	COG0739	heme binding
IX87_RS18410	COG1196	nuclear chromosome segregation
IX87_RS18410	COG0741	lytic transglycosylase activity
IX87_RS18475	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
IX87_RS18520	COG0339	signal peptide processing
IX87_RS18530	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IX87_RS18565	COG0702	epimerase
IX87_RS18570	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IX87_RS18590	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IX87_RS18620	COG0316	Belongs to the HesB IscA family
IX87_RS18625	COG0822	iron-sulfur transferase activity
IX87_RS18655	COG0776	regulation of translation
IX87_RS18660	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IX87_RS18665	COG2207	Transcriptional regulator
IX87_RS18670	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX87_RS18675	COG1960	acyl-CoA dehydrogenase activity
IX87_RS18680	COG1960	acyl-CoA dehydrogenase activity
IX87_RS18695	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IX87_RS18710	COG2814	Major facilitator Superfamily
IX87_RS18715	COG4264	IucA IucC family
IX87_RS18720	COG4264	IucA IucC family
IX87_RS18730	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IX87_RS18760	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IX87_RS18775	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
IX87_RS18780	COG0406	alpha-ribazole phosphatase activity
IX87_RS18795	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IX87_RS18800	COG0730	response to heat
IX87_RS18820	COG4773	Receptor
IX87_RS18825	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IX87_RS18840	COG1131	(ABC) transporter
IX87_RS18845	COG0842	Transport permease protein
IX87_RS18850	COG0842	Transport permease protein
IX87_RS18915	COG2226	methyltransferase
IX87_RS18940	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IX87_RS18985	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IX87_RS18995	COG0133	tryptophan synthase activity
IX87_RS19010	COG3706	GGDEF domain
IX87_RS19025	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
IX87_RS19030	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
IX87_RS19035	COG0022	dehydrogenase e1 component
IX87_RS19040	COG0508	dehydrogenase complex catalyzes the overall conversion of
IX87_RS19045	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IX87_RS19055	COG1063	alcohol dehydrogenase
IX87_RS19060	COG3781	membrane
IX87_RS19070	COG3453	Protein conserved in bacteria
IX87_RS19070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IX87_RS19080	COG0730	response to heat
IX87_RS19095	COG2207	Transcriptional regulator
IX87_RS19095	COG3708	Transcriptional regulator
IX87_RS19100	COG1733	regulation of RNA biosynthetic process
IX87_RS19105	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IX87_RS19115	COG2188	Transcriptional regulator
IX87_RS19130	COG4521	taurine ABC transporter
IX87_RS19135	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IX87_RS19155	COG0477	Major facilitator Superfamily
IX87_RS19165	COG1027	Aspartate ammonia-lyase
IX87_RS19180	COG0583	DNA-binding transcription factor activity
IX87_RS19185	COG0583	DNA-binding transcription factor activity
IX87_RS19190	COG0183	Belongs to the thiolase family
IX87_RS19195	COG2031	fatty acid transporter
IX87_RS19210	COG0583	DNA-binding transcription factor activity
IX87_RS19230	COG1309	transcriptional regulator
IX87_RS19250	COG2610	gluconate transmembrane transporter activity
IX87_RS19255	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS19260	COG2207	Transcriptional regulator
IX87_RS19275	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS19285	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX87_RS19300	COG0543	2 iron, 2 sulfur cluster binding
IX87_RS19300	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IX87_RS19305	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
IX87_RS19310	COG4638	Rieske (2fe-2S)
IX87_RS19320	COG0725	ABC transporter, periplasmic molybdate-binding protein
IX87_RS19325	COG4149	molybdate abc transporter
IX87_RS19330	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
IX87_RS19335	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS19340	COG1535	isochorismatase
IX87_RS19340	COG3433	isochorismatase activity
IX87_RS19355	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
IX87_RS19365	COG0732	type I restriction modification DNA specificity domain
IX87_RS19425	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IX87_RS19450	COG0753	catalase activity
IX87_RS19460	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
IX87_RS19545	COG0656	L-ascorbic acid biosynthetic process
IX87_RS19550	COG0494	nUDIX hydrolase
IX87_RS19570	COG1609	Transcriptional regulator
IX87_RS19580	COG0028	Belongs to the TPP enzyme family
IX87_RS19590	COG4580	involved in the transport of maltose and maltodextrins
IX87_RS19605	COG0483	inositol monophosphate 1-phosphatase activity
IX87_RS19620	COG0028	Belongs to the TPP enzyme family
IX87_RS19625	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
IX87_RS19635	COG1346	cytolysis
IX87_RS19640	COG1609	Transcriptional regulator
IX87_RS19650	COG0697	spore germination
IX87_RS19660	COG2223	nitrite transmembrane transporter activity
IX87_RS19680	COG4580	involved in the transport of maltose and maltodextrins
IX87_RS19695	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS19700	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
IX87_RS19705	COG2267	carboxylic ester hydrolase activity
IX87_RS19720	COG3938	Belongs to the proline racemase family
IX87_RS19725	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS19750	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IX87_RS19770	COG2072	flavoprotein involved in K transport
IX87_RS19785	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX87_RS19790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX87_RS19795	COG0745	RESPONSE REGULATOR receiver
IX87_RS19800	COG2205	protein histidine kinase activity
IX87_RS19810	COG2207	Transcriptional regulator
IX87_RS19820	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS19830	COG1073	alpha beta
IX87_RS19910	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
IX87_RS19965	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IX87_RS19985	COG1120	ATPase activity
IX87_RS19990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IX87_RS20000	COG1064	alcohol dehydrogenase
IX87_RS20010	COG2207	Transcriptional regulator
IX87_RS20015	COG2084	Dehydrogenase
IX87_RS20025	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IX87_RS20030	COG0583	DNA-binding transcription factor activity
IX87_RS20040	COG0129	dihydroxy-acid dehydratase activity
IX87_RS20045	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS20050	COG1846	Transcriptional regulator
IX87_RS20055	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX87_RS20060	COG1960	acyl-CoA dehydrogenase activity
IX87_RS20065	COG0477	Major facilitator Superfamily
IX87_RS20080	COG3971	2-oxopent-4-enoate hydratase activity
IX87_RS20090	COG3384	dioxygenase
IX87_RS20095	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS20105	COG0179	Fumarylacetoacetate (FAA) hydrolase
IX87_RS20115	COG2814	Major facilitator Superfamily
IX87_RS20120	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IX87_RS20175	COG0753	catalase activity
IX87_RS20190	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS20205	COG3162	membrane
IX87_RS20225	COG0318	PFAM AMP-dependent synthetase and ligase
IX87_RS20230	COG3829	transcription factor binding
IX87_RS20245	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS20250	COG1960	acyl-CoA dehydrogenase activity
IX87_RS20265	COG3231	kanamycin kinase activity
IX87_RS20270	COG1012	belongs to the aldehyde dehydrogenase family
IX87_RS20290	COG2186	Transcriptional regulator
IX87_RS20300	COG0583	DNA-binding transcription factor activity
IX87_RS20305	COG4948	Mandelate Racemase Muconate Lactonizing
IX87_RS20310	COG4829	muconolactone delta-isomerase
IX87_RS20320	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IX87_RS20325	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
IX87_RS20330	COG0183	Belongs to the thiolase family
IX87_RS20335	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IX87_RS20360	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX87_RS20370	COG1028	Short-chain dehydrogenase reductase Sdr
IX87_RS20380	COG4638	Rieske (2fe-2S)
IX87_RS20400	COG0154	amidase activity
IX87_RS20410	COG2814	Major facilitator Superfamily
IX87_RS20435	COG1960	acyl-CoA dehydrogenase activity
IX87_RS20440	COG0583	DNA-binding transcription factor activity
IX87_RS20445	COG1414	Transcriptional regulator
IX87_RS20460	COG2391	methyltransferase activity
IX87_RS20470	COG4993	Dehydrogenase
IX87_RS20475	COG3659	wide pore channel activity
IX87_RS20480	COG3420	alginic acid biosynthetic process
IX87_RS20485	COG0710	3-dehydroquinate dehydratase activity
IX87_RS20490	COG3485	protocatechuate 3,4-dioxygenase
IX87_RS20495	COG3485	protocatechuate 3,4-dioxygenase
IX87_RS20500	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IX87_RS20505	COG2271	Major facilitator Superfamily
IX87_RS20510	COG0596	Alpha beta hydrolase
IX87_RS20515	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IX87_RS20520	COG0183	Belongs to the thiolase family
IX87_RS20525	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
IX87_RS20530	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IX87_RS20540	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
IX87_RS20545	COG2323	membrane
IX87_RS20590	COG1902	pentaerythritol trinitrate reductase activity
IX87_RS20590	COG0446	pyridine nucleotide-disulphide oxidoreductase
IX87_RS20615	COG0542	response to heat
IX87_RS20620	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
IX87_RS20650	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IX87_RS20655	COG0569	domain protein
IX87_RS20660	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IX87_RS20675	COG4774	siderophore transport
IX87_RS20680	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX87_RS20690	COG1585	Membrane protein implicated in regulation of membrane protease activity
IX87_RS20715	COG1294	oxidase, subunit
IX87_RS20720	COG4890	Cyd operon protein YbgT
IX87_RS20735	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
IX87_RS20745	COG0552	protein localization to endoplasmic reticulum
IX87_RS20770	COG0517	IMP dehydrogenase activity
IX87_RS20770	COG0516	GMP reductase activity
IX87_RS20775	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IX87_RS20780	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IX87_RS20790	COG0583	DNA-binding transcription factor activity
IX87_RS20795	COG0024	Methionine aminopeptidase
IX87_RS20825	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX87_RS20825	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IX87_RS20830	COG1105	Belongs to the carbohydrate kinase PfkB family
IX87_RS20835	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
IX87_RS20835	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX87_RS20835	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX87_RS20900	COG0776	regulation of translation
IX87_RS20950	COG4373	Mu-like prophage FluMu protein gp28
IX87_RS20970	COG4383	Mu-like prophage protein gp29
IX87_RS20975	COG2369	cell adhesion
IX87_RS21080	COG3299	homolog of phage Mu protein gp47
IX87_RS21115	COG5001	Diguanylate cyclase
IX87_RS21115	COG3300	MHYT domain
IX87_RS21130	COG2135	peptidase activity
IX87_RS21135	COG0659	secondary active sulfate transmembrane transporter activity
IX87_RS21160	COG1113	amino acid transport
IX87_RS21170	COG1522	sequence-specific DNA binding
IX87_RS21195	COG1011	Hydrolase
IX87_RS21200	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
IX87_RS21210	COG2137	regulation of response to DNA damage stimulus
IX87_RS21220	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IX87_RS21255	COG0575	Belongs to the CDS family
IX87_RS21260	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IX87_RS21280	COG3852	Histidine kinase
IX87_RS21285	COG2204	response regulator
IX87_RS21350	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
IX87_RS21355	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
IX87_RS21375	COG0697	spore germination
IX87_RS21380	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX87_RS21390	COG0303	'Molybdopterin
IX87_RS21395	COG0521	Mo-molybdopterin cofactor biosynthetic process
IX87_RS21395	COG0315	cyclic pyranopterin monophosphate synthase activity
IX87_RS21410	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
IX87_RS21415	COG0243	molybdopterin cofactor binding
IX87_RS21425	COG0243	molybdopterin cofactor binding
IX87_RS21430	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IX87_RS21435	COG2146	nitrite reductase [NAD(P)H] activity
IX87_RS21435	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IX87_RS21445	COG0745	RESPONSE REGULATOR receiver
IX87_RS21485	COG1116	anion transmembrane transporter activity
IX87_RS21485	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IX87_RS21500	COG0511	ligase activity, forming carbon-carbon bonds
IX87_RS21515	COG2814	Major facilitator Superfamily
IX87_RS21560	COG3293	Transposase
IX87_RS21565	COG1063	alcohol dehydrogenase
IX87_RS21585	COG3179	chitinase
IX87_RS21615	COG1196	nuclear chromosome segregation
IX87_RS21615	COG0741	lytic transglycosylase activity
IX87_RS21615	COG0739	heme binding
IX87_RS21625	COG1598	PFAM Uncharacterised protein family UPF0150