CTY05_RS00120	PWY-6825	phosphatidylcholine biosynthesis V
CTY05_RS00130	PWY-5101	L-isoleucine biosynthesis II
CTY05_RS00130	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS00130	PWY-5104	L-isoleucine biosynthesis IV
CTY05_RS00130	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS00155	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_RS00155	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_RS00155	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS00155	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS00155	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CTY05_RS00155	PWY-6549	L-glutamine biosynthesis III
CTY05_RS00155	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_RS00155	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_RS00155	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_RS00190	PWY-2941	L-lysine biosynthesis II
CTY05_RS00190	PWY-2942	L-lysine biosynthesis III
CTY05_RS00190	PWY-5097	L-lysine biosynthesis VI
CTY05_RS00295	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_RS00295	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_RS00295	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_RS00305	PWY-2941	L-lysine biosynthesis II
CTY05_RS00305	PWY-2942	L-lysine biosynthesis III
CTY05_RS00305	PWY-5097	L-lysine biosynthesis VI
CTY05_RS00360	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_RS00385	PWY-5028	L-histidine degradation II
CTY05_RS00385	PWY-5030	L-histidine degradation III
CTY05_RS00390	PWY-5028	L-histidine degradation II
CTY05_RS00390	PWY-5030	L-histidine degradation III
CTY05_RS00400	PWY-5028	L-histidine degradation II
CTY05_RS00400	PWY-5030	L-histidine degradation III
CTY05_RS00420	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS00420	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS00450	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_RS00455	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTY05_RS00455	PWY-5667	CDP-diacylglycerol biosynthesis I
CTY05_RS00455	PWY-6453	stigma estolide biosynthesis
CTY05_RS00455	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CTY05_RS00455	PWY-7587	oleate biosynthesis III (cyanobacteria)
CTY05_RS00460	PWY-5269	cardiolipin biosynthesis II
CTY05_RS00460	PWY-5668	cardiolipin biosynthesis I
CTY05_RS00460	PWY-7817	CTY05_RS00460
CTY05_RS00465	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CTY05_RS00465	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CTY05_RS00465	PWY-6896	thiamin salvage I
CTY05_RS00465	PWY-6897	thiamin salvage II
CTY05_RS00475	PWY-6167	flavin biosynthesis II (archaea)
CTY05_RS00475	PWY-6168	flavin biosynthesis III (fungi)
CTY05_RS00480	PWY-6167	flavin biosynthesis II (archaea)
CTY05_RS00480	PWY-6168	flavin biosynthesis III (fungi)
CTY05_RS00480	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_RS00515	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_RS00520	PWY-5350	thiosulfate disproportionation III (rhodanese)
CTY05_RS00525	PWY-5669	phosphatidylethanolamine biosynthesis I
CTY05_RS00530	PWY-6857	retinol biosynthesis
CTY05_RS00580	PWY-6840	homoglutathione biosynthesis
CTY05_RS00580	PWY-7255	ergothioneine biosynthesis I (bacteria)
CTY05_RS00635	PWY-5694	allantoin degradation to glyoxylate I
CTY05_RS00635	PWY-5705	allantoin degradation to glyoxylate III
CTY05_RS00640	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
CTY05_RS00660	PWY-5691	urate degradation to allantoin I
CTY05_RS00660	PWY-7394	urate degradation to allantoin II
CTY05_RS00660	PWY-7849	CTY05_RS00660
CTY05_RS00665	PWY-5691	urate degradation to allantoin I
CTY05_RS00665	PWY-7394	urate degradation to allantoin II
CTY05_RS00665	PWY-7849	CTY05_RS00665
CTY05_RS00720	PWY-5686	UMP biosynthesis
CTY05_RS00720	PWY-7790	CTY05_RS00720
CTY05_RS00720	PWY-7791	CTY05_RS00720
CTY05_RS00740	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_RS00740	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_RS00740	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_RS00740	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_RS00745	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS00745	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS00750	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS00750	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS00770	PWY-2201	folate transformations I
CTY05_RS00770	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS00785	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_RS00785	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_RS00785	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS00820	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_RS00820	PWY-6596	adenosine nucleotides degradation I
CTY05_RS00820	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS00825	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_RS00830	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CTY05_RS00830	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CTY05_RS00835	PWY-7805	CTY05_RS00835
CTY05_RS00835	PWY-7807	CTY05_RS00835
CTY05_RS00860	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CTY05_RS00865	PWY-2201	folate transformations I
CTY05_RS00880	PWY-5132	humulone biosynthesis
CTY05_RS00880	PWY-5133	cohumulone biosynthesis
CTY05_RS00880	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CTY05_RS00880	PWY-7118	chitin degradation to ethanol
CTY05_RS00880	PWY-7857	CTY05_RS00880
CTY05_RS00900	PWY-7723	CTY05_RS00900
CTY05_RS00975	PWY-6899	base-degraded thiamin salvage
CTY05_RS00975	PWY-7356	thiamin salvage IV (yeast)
CTY05_RS01055	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS01065	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CTY05_RS01065	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTY05_RS01395	PWY-702	L-methionine biosynthesis II
CTY05_RS01490	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_RS01490	PWY-5743	3-hydroxypropanoate cycle
CTY05_RS01490	PWY-5744	glyoxylate assimilation
CTY05_RS01490	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_RS01490	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS01490	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_RS01490	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_RS01585	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_RS01600	PWY-2201	folate transformations I
CTY05_RS01620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS01620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS01625	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_RS01625	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_RS01625	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_RS01670	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_RS01675	PWY-6164	3-dehydroquinate biosynthesis I
CTY05_RS01755	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS01760	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS01810	PWY-6829	tRNA methylation (yeast)
CTY05_RS01810	PWY-7285	methylwyosine biosynthesis
CTY05_RS01810	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CTY05_RS01895	PWY-6854	ethylene biosynthesis III (microbes)
CTY05_RS02070	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_RS02075	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTY05_RS02080	PWY-6168	flavin biosynthesis III (fungi)
CTY05_RS02080	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_RS02085	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_RS02085	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_RS02085	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS02090	PWY-2301	<i>myo</i>-inositol biosynthesis
CTY05_RS02090	PWY-4702	phytate degradation I
CTY05_RS02090	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
CTY05_RS02160	PWY-5667	CDP-diacylglycerol biosynthesis I
CTY05_RS02160	PWY-6453	stigma estolide biosynthesis
CTY05_RS02160	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CTY05_RS02160	PWY-7587	oleate biosynthesis III (cyanobacteria)
CTY05_RS02465	PWY-7731	CTY05_RS02465
CTY05_RS02515	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_RS02515	PWY-5392	reductive TCA cycle II
CTY05_RS02515	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_RS02515	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS02515	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS02515	PWY-6728	methylaspartate cycle
CTY05_RS02515	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS02515	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_RS02515	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_RS02540	PWY-5669	phosphatidylethanolamine biosynthesis I
CTY05_RS02575	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS02605	PWY-6679	jadomycin biosynthesis
CTY05_RS02605	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS02650	PWY-7294	xylose degradation IV
CTY05_RS02650	PWY-7295	L-arabinose degradation IV
CTY05_RS02820	PWY-7851	CTY05_RS02820
CTY05_RS02840	PWY-6700	queuosine biosynthesis
CTY05_RS02855	PWY-6700	queuosine biosynthesis
CTY05_RS02875	PWY-5057	L-valine degradation II
CTY05_RS02875	PWY-5076	L-leucine degradation III
CTY05_RS02875	PWY-5078	L-isoleucine degradation II
CTY05_RS02875	PWY-5101	L-isoleucine biosynthesis II
CTY05_RS02875	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS02875	PWY-5104	L-isoleucine biosynthesis IV
CTY05_RS02875	PWY-5108	L-isoleucine biosynthesis V
CTY05_RS02875	PWY-7767	CTY05_RS02875
CTY05_RS02995	PWY-5987	sorgoleone biosynthesis
CTY05_RS02995	PWY-5996	oleate biosynthesis II (animals and fungi)
CTY05_RS03010	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CTY05_RS03010	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CTY05_RS03010	PWY-6268	adenosylcobalamin salvage from cobalamin
CTY05_RS03010	PWY-6269	adenosylcobalamin salvage from cobinamide II
CTY05_RS03055	PWY-6679	jadomycin biosynthesis
CTY05_RS03055	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS03060	PWY-2161	folate polyglutamylation
CTY05_RS03125	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS03125	PWY-5109	2-methylbutanoate biosynthesis
CTY05_RS03125	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_RS03125	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_RS03125	PWY-5177	glutaryl-CoA degradation
CTY05_RS03125	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_RS03125	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_RS03125	PWY-6583	pyruvate fermentation to butanol I
CTY05_RS03125	PWY-6863	pyruvate fermentation to hexanol
CTY05_RS03125	PWY-6883	pyruvate fermentation to butanol II
CTY05_RS03125	PWY-6944	androstenedione degradation
CTY05_RS03125	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_RS03125	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_RS03125	PWY-7007	methyl ketone biosynthesis
CTY05_RS03125	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_RS03125	PWY-7094	fatty acid salvage
CTY05_RS03125	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_RS03125	PWY-735	jasmonic acid biosynthesis
CTY05_RS03125	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_RS03125	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_RS03125	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_RS03125	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_RS03125	PWY-7726	CTY05_RS03125
CTY05_RS03125	PWY-7778	CTY05_RS03125
CTY05_RS03125	PWY-7779	CTY05_RS03125
CTY05_RS03125	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CTY05_RS03155	PWY-6683	sulfate reduction III (assimilatory)
CTY05_RS03200	PWY-6825	phosphatidylcholine biosynthesis V
CTY05_RS03490	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_RS03570	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CTY05_RS03780	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CTY05_RS03785	PWY-5194	siroheme biosynthesis
CTY05_RS03785	PWY-5196	factor 430 biosynthesis
CTY05_RS03785	PWY-5441	S-methyl-L-methionine cycle
CTY05_RS03785	PWY-702	L-methionine biosynthesis II
CTY05_RS03785	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CTY05_RS03790	PWY-6004	glycine betaine biosynthesis V (from glycine)
CTY05_RS03820	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTY05_RS03820	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTY05_RS03870	PWY-3781	aerobic respiration I (cytochrome c)
CTY05_RS03870	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTY05_RS03870	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_RS03870	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS03870	PWY-6728	methylaspartate cycle
CTY05_RS03870	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS03870	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS03870	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTY05_RS03875	PWY-3781	aerobic respiration I (cytochrome c)
CTY05_RS03875	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTY05_RS03875	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_RS03875	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS03875	PWY-6728	methylaspartate cycle
CTY05_RS03875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS03875	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS03875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTY05_RS03890	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_RS03895	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_RS03900	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CTY05_RS03900	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_RS03905	PWY-5392	reductive TCA cycle II
CTY05_RS03905	PWY-5537	pyruvate fermentation to acetate V
CTY05_RS03905	PWY-5538	pyruvate fermentation to acetate VI
CTY05_RS03905	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS03905	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS03905	PWY-6728	methylaspartate cycle
CTY05_RS03905	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS03905	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_RS03910	PWY-5392	reductive TCA cycle II
CTY05_RS03910	PWY-5537	pyruvate fermentation to acetate V
CTY05_RS03910	PWY-5538	pyruvate fermentation to acetate VI
CTY05_RS03910	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS03910	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS03910	PWY-6728	methylaspartate cycle
CTY05_RS03910	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS03910	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_RS03985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS03985	PWY-5686	UMP biosynthesis
CTY05_RS03985	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS03985	PWY-7790	CTY05_RS03985
CTY05_RS03985	PWY-7791	CTY05_RS03985
CTY05_RS03990	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS03990	PWY-5686	UMP biosynthesis
CTY05_RS03990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS03990	PWY-7790	CTY05_RS03990
CTY05_RS03990	PWY-7791	CTY05_RS03990
CTY05_RS04020	PWY-6614	tetrahydrofolate biosynthesis
CTY05_RS04055	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CTY05_RS04055	PWY-2201	folate transformations I
CTY05_RS04055	PWY-3841	folate transformations II
CTY05_RS04055	PWY-5030	L-histidine degradation III
CTY05_RS04055	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS04055	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CTY05_RS04075	PWY-4261	glycerol degradation I
CTY05_RS04080	PWY-4261	glycerol degradation I
CTY05_RS04080	PWY-6118	glycerol-3-phosphate shuttle
CTY05_RS04080	PWY-6952	glycerophosphodiester degradation
CTY05_RS04085	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_RS04115	PWY-7039	phosphatidate metabolism, as a signaling molecule
CTY05_RS04115	PWY-7817	CTY05_RS04115
CTY05_RS04180	PWY-2582	brassinosteroid biosynthesis II
CTY05_RS04180	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_RS04180	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_RS04180	PWY-6948	sitosterol degradation to androstenedione
CTY05_RS04180	PWY-699	brassinosteroid biosynthesis I
CTY05_RS04180	PWY-7299	progesterone biosynthesis
CTY05_RS04260	PWY-181	photorespiration
CTY05_RS04290	PWY-2941	L-lysine biosynthesis II
CTY05_RS04290	PWY-2942	L-lysine biosynthesis III
CTY05_RS04290	PWY-5097	L-lysine biosynthesis VI
CTY05_RS04295	PWY-2941	L-lysine biosynthesis II
CTY05_RS04295	PWY-5097	L-lysine biosynthesis VI
CTY05_RS04420	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_RS04420	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CTY05_RS04425	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_RS04425	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_RS04425	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_RS04470	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS04530	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_RS04530	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_RS04530	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_RS04565	PWY-6482	diphthamide biosynthesis (archaea)
CTY05_RS04565	PWY-7546	diphthamide biosynthesis (eukaryotes)
CTY05_RS04575	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_RS04580	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_RS04625	PWY-6543	4-aminobenzoate biosynthesis
CTY05_RS04635	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_RS04635	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS04635	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS04635	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTY05_RS04635	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_RS04635	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_RS04645	PWY-5316	nicotine biosynthesis
CTY05_RS04645	PWY-7342	superpathway of nicotine biosynthesis
CTY05_RS04730	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS04770	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS04770	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS04770	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS04770	PWY-7003	glycerol degradation to butanol
CTY05_RS04790	PWY-3341	L-proline biosynthesis III
CTY05_RS04790	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CTY05_RS04810	PWY-723	alkylnitronates degradation
CTY05_RS04870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_RS04870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_RS04880	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS04880	PWY-6549	L-glutamine biosynthesis III
CTY05_RS04880	PWY-6728	methylaspartate cycle
CTY05_RS04880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS04880	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_RS04880	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS04880	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTY05_RS04890	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS04890	PWY-6549	L-glutamine biosynthesis III
CTY05_RS04890	PWY-6728	methylaspartate cycle
CTY05_RS04890	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS04890	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_RS04890	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS04890	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTY05_RS04985	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CTY05_RS04985	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CTY05_RS04985	PWY-6897	thiamin salvage II
CTY05_RS04985	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CTY05_RS04985	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CTY05_RS04985	PWY-7356	thiamin salvage IV (yeast)
CTY05_RS04985	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CTY05_RS04990	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_RS05045	PWY-6409	pyoverdine I biosynthesis
CTY05_RS05045	PWY-6562	norspermidine biosynthesis
CTY05_RS05045	PWY-761	rhizobactin 1021 biosynthesis
CTY05_RS05045	PWY-7855	CTY05_RS05045
CTY05_RS05110	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_RS05110	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_RS05110	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS05110	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_RS05135	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_RS05135	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_RS05150	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_RS05150	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_RS05150	PWY-6596	adenosine nucleotides degradation I
CTY05_RS05150	PWY-6606	guanosine nucleotides degradation II
CTY05_RS05150	PWY-6607	guanosine nucleotides degradation I
CTY05_RS05150	PWY-6608	guanosine nucleotides degradation III
CTY05_RS05150	PWY-7185	UTP and CTP dephosphorylation I
CTY05_RS05150	PWY-7821	CTY05_RS05150
CTY05_RS05175	PWY-5386	methylglyoxal degradation I
CTY05_RS05225	PWY-6823	molybdenum cofactor biosynthesis
CTY05_RS05335	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CTY05_RS05340	PWY-6173	histamine biosynthesis
CTY05_RS05365	PWY-6012	acyl carrier protein metabolism I
CTY05_RS05365	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTY05_RS05370	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CTY05_RS05370	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CTY05_RS05370	PWY-6406	salicylate biosynthesis I
CTY05_RS05380	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CTY05_RS05380	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTY05_RS05380	PWY-7766	CTY05_RS05380
CTY05_RS05405	PWY-5663	tetrahydrobiopterin biosynthesis I
CTY05_RS05405	PWY-5664	tetrahydrobiopterin biosynthesis II
CTY05_RS05405	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_RS05405	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_RS05405	PWY-6983	tetrahydrobiopterin biosynthesis III
CTY05_RS05405	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CTY05_RS05405	PWY-7852	CTY05_RS05405
CTY05_RS05410	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS05410	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_RS05410	PWY-6538	caffeine degradation III (bacteria, via demethylation)
CTY05_RS05410	PWY-6596	adenosine nucleotides degradation I
CTY05_RS05410	PWY-6606	guanosine nucleotides degradation II
CTY05_RS05410	PWY-6607	guanosine nucleotides degradation I
CTY05_RS05410	PWY-6608	guanosine nucleotides degradation III
CTY05_RS05410	PWY-6999	theophylline degradation
CTY05_RS05415	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS05415	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_RS05415	PWY-6538	caffeine degradation III (bacteria, via demethylation)
CTY05_RS05415	PWY-6596	adenosine nucleotides degradation I
CTY05_RS05415	PWY-6606	guanosine nucleotides degradation II
CTY05_RS05415	PWY-6607	guanosine nucleotides degradation I
CTY05_RS05415	PWY-6608	guanosine nucleotides degradation III
CTY05_RS05415	PWY-6999	theophylline degradation
CTY05_RS05450	PWY-5958	acridone alkaloid biosynthesis
CTY05_RS05450	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CTY05_RS05450	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CTY05_RS05465	PWY-381	nitrate reduction II (assimilatory)
CTY05_RS05465	PWY-5675	nitrate reduction V (assimilatory)
CTY05_RS05465	PWY-6549	L-glutamine biosynthesis III
CTY05_RS05465	PWY-6963	ammonia assimilation cycle I
CTY05_RS05465	PWY-6964	ammonia assimilation cycle II
CTY05_RS05470	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
CTY05_RS05470	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CTY05_RS05470	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_RS05470	PWY-7742	CTY05_RS05470
CTY05_RS05470	PWY-7745	CTY05_RS05470
CTY05_RS05480	PWY-6857	retinol biosynthesis
CTY05_RS05510	PWY-6854	ethylene biosynthesis III (microbes)
CTY05_RS05530	PWY-1281	sulfoacetaldehyde degradation I
CTY05_RS05530	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_RS05530	PWY-5482	pyruvate fermentation to acetate II
CTY05_RS05530	PWY-5485	pyruvate fermentation to acetate IV
CTY05_RS05530	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS05530	PWY-6637	sulfolactate degradation II
CTY05_RS05530	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_RS05540	PWY-2201	folate transformations I
CTY05_RS05545	PWY-2201	folate transformations I
CTY05_RS05545	PWY-3841	folate transformations II
CTY05_RS05550	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CTY05_RS05570	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTY05_RS05570	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTY05_RS05595	PWY-7799	CTY05_RS05595
CTY05_RS05595	PWY-7800	CTY05_RS05595
CTY05_RS05655	PWY-6700	queuosine biosynthesis
CTY05_RS05685	PWY-6857	retinol biosynthesis
CTY05_RS05695	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_RS05695	PWY-181	photorespiration
CTY05_RS05695	PWY-2161	folate polyglutamylation
CTY05_RS05695	PWY-2201	folate transformations I
CTY05_RS05695	PWY-3661	glycine betaine degradation I
CTY05_RS05695	PWY-3661-1	glycine betaine degradation II (mammalian)
CTY05_RS05695	PWY-3841	folate transformations II
CTY05_RS05695	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS05805	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CTY05_RS05805	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CTY05_RS05805	PWY-6897	thiamin salvage II
CTY05_RS05805	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CTY05_RS05805	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CTY05_RS05805	PWY-7356	thiamin salvage IV (yeast)
CTY05_RS05805	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CTY05_RS05815	PWY-1001	cellulose biosynthesis
CTY05_RS05815	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_RS05815	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_RS05815	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_RS05815	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_RS05820	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CTY05_RS05820	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTY05_RS05820	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CTY05_RS05855	PWY-3461	L-tyrosine biosynthesis II
CTY05_RS05855	PWY-3462	L-phenylalanine biosynthesis II
CTY05_RS05855	PWY-6120	L-tyrosine biosynthesis III
CTY05_RS05855	PWY-6627	salinosporamide A biosynthesis
CTY05_RS05855	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CTY05_RS05855	PWY-7626	bacilysin biosynthesis
CTY05_RS05860	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_RS05860	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CTY05_RS05890	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_RS05890	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_RS05935	PWY-5667	CDP-diacylglycerol biosynthesis I
CTY05_RS05935	PWY-5981	CDP-diacylglycerol biosynthesis III
CTY05_RS05955	PWY-5686	UMP biosynthesis
CTY05_RS05965	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_RS05965	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_RS05965	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_RS05965	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CTY05_RS06000	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CTY05_RS06000	PWY-5368	dimorphecolate biosynthesis
CTY05_RS06000	PWY-5995	linoleate biosynthesis I (plants)
CTY05_RS06000	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CTY05_RS06000	PWY-6803	phosphatidylcholine acyl editing
CTY05_RS06000	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CTY05_RS06000	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CTY05_RS06000	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CTY05_RS06000	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CTY05_RS06000	PWY-7470	phosphatidylcholine biosynthesis VII
CTY05_RS06000	PWY-7618	ricinoleate biosynthesis
CTY05_RS06055	PWY-5642	2,4-dinitrotoluene degradation
CTY05_RS06055	PWY-6373	acrylate degradation
CTY05_RS06125	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CTY05_RS06125	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CTY05_RS06125	PWY-7717	CTY05_RS06125
CTY05_RS06125	PWY-7733	CTY05_RS06125
CTY05_RS06125	PWY-7734	CTY05_RS06125
CTY05_RS06125	PWY-7765	CTY05_RS06125
CTY05_RS06255	PWY-5691	urate degradation to allantoin I
CTY05_RS06255	PWY-7394	urate degradation to allantoin II
CTY05_RS06255	PWY-7849	CTY05_RS06255
CTY05_RS06335	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS06335	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS06375	PWY-5386	methylglyoxal degradation I
CTY05_RS06395	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_RS06395	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_RS06395	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_RS06400	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_RS06400	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_RS06400	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_RS06455	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_RS06495	PWY-3781	aerobic respiration I (cytochrome c)
CTY05_RS06495	PWY-4521	arsenite oxidation I (respiratory)
CTY05_RS06495	PWY-6692	Fe(II) oxidation
CTY05_RS06495	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTY05_RS06495	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
CTY05_RS06510	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS06630	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_RS06630	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_RS06630	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTY05_RS06630	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_RS06635	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_RS06635	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_RS06635	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTY05_RS06635	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_RS06635	PWY-7852	CTY05_RS06635
CTY05_RS06635	PWY-7853	CTY05_RS06635
CTY05_RS06665	PWY-381	nitrate reduction II (assimilatory)
CTY05_RS06665	PWY-5675	nitrate reduction V (assimilatory)
CTY05_RS06665	PWY-6549	L-glutamine biosynthesis III
CTY05_RS06665	PWY-6963	ammonia assimilation cycle I
CTY05_RS06665	PWY-6964	ammonia assimilation cycle II
CTY05_RS06705	PWY-5747	2-methylcitrate cycle II
CTY05_RS06780	PWY-2781	<i>cis</i>-zeatin biosynthesis
CTY05_RS06815	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_RS06870	PWY-6897	thiamin salvage II
CTY05_RS06870	PWY-7356	thiamin salvage IV (yeast)
CTY05_RS06870	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CTY05_RS06925	PWY-3461	L-tyrosine biosynthesis II
CTY05_RS06925	PWY-3462	L-phenylalanine biosynthesis II
CTY05_RS06925	PWY-6120	L-tyrosine biosynthesis III
CTY05_RS06925	PWY-6627	salinosporamide A biosynthesis
CTY05_RS06925	PWY-7626	bacilysin biosynthesis
CTY05_RS07070	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_RS07070	PWY-5723	Rubisco shunt
CTY05_RS07120	PWY-7782	CTY05_RS07120
CTY05_RS07120	PWY-7783	CTY05_RS07120
CTY05_RS07145	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS07145	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS07200	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_RS07200	PWY-6416	quinate degradation II
CTY05_RS07200	PWY-6707	gallate biosynthesis
CTY05_RS07230	PWY-6683	sulfate reduction III (assimilatory)
CTY05_RS07245	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CTY05_RS07245	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CTY05_RS07265	PWY-6823	molybdenum cofactor biosynthesis
CTY05_RS07275	PWY-6823	molybdenum cofactor biosynthesis
CTY05_RS07320	PWY-5392	reductive TCA cycle II
CTY05_RS07320	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_RS07320	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS07320	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS07320	PWY-6728	methylaspartate cycle
CTY05_RS07320	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS07320	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS07320	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_RS07355	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS07365	PWY-4981	L-proline biosynthesis II (from arginine)
CTY05_RS07365	PWY-4984	urea cycle
CTY05_RS07365	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS07410	PWY-5667	CDP-diacylglycerol biosynthesis I
CTY05_RS07410	PWY-5981	CDP-diacylglycerol biosynthesis III
CTY05_RS07410	PWY-7817	CTY05_RS07410
CTY05_RS07415	PWY-7294	xylose degradation IV
CTY05_RS07415	PWY-7295	L-arabinose degradation IV
CTY05_RS07415	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS07440	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTY05_RS07440	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTY05_RS07440	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTY05_RS07440	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTY05_RS07440	PWY-6113	superpathway of mycolate biosynthesis
CTY05_RS07440	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTY05_RS07440	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_RS07440	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS07440	PWY-7663	gondoate biosynthesis (anaerobic)
CTY05_RS07440	PWY-7664	oleate biosynthesis IV (anaerobic)
CTY05_RS07440	PWY-7858	CTY05_RS07440
CTY05_RS07440	PWYG-321	mycolate biosynthesis
CTY05_RS07505	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CTY05_RS07505	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CTY05_RS07535	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CTY05_RS07565	PWY-6619	adenine and adenosine salvage VI
CTY05_RS07605	PWY-7799	CTY05_RS07605
CTY05_RS07605	PWY-7800	CTY05_RS07605
CTY05_RS07675	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
CTY05_RS07720	PWY-6803	phosphatidylcholine acyl editing
CTY05_RS07720	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CTY05_RS07720	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CTY05_RS07720	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CTY05_RS07720	PWY-7783	CTY05_RS07720
CTY05_RS07740	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_RS07740	PWY-5723	Rubisco shunt
CTY05_RS07755	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS07755	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS07780	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_RS07780	PWY-6164	3-dehydroquinate biosynthesis I
CTY05_RS07780	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_RS07825	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTY05_RS07825	PWY-7177	UTP and CTP dephosphorylation II
CTY05_RS07825	PWY-7185	UTP and CTP dephosphorylation I
CTY05_RS07830	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_RS07830	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_RS07835	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS07835	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_RS07835	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_RS07835	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS07835	PWY-5723	Rubisco shunt
CTY05_RS07835	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS07835	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_RS07835	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS07835	PWY-7003	glycerol degradation to butanol
CTY05_RS07835	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_RS07835	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTY05_RS07850	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS07865	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS07865	PWY-2361	3-oxoadipate degradation
CTY05_RS07865	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_RS07870	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_RS07870	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_RS07870	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS07870	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_RS07875	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_RS07900	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_RS07900	PWY-6416	quinate degradation II
CTY05_RS07900	PWY-6707	gallate biosynthesis
CTY05_RS07985	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_RS08055	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_RS08060	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS08060	PWY-2361	3-oxoadipate degradation
CTY05_RS08060	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_RS08085	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_RS08090	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS08090	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_RS08090	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_RS08090	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS08090	PWY-5723	Rubisco shunt
CTY05_RS08090	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS08090	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_RS08090	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS08090	PWY-7003	glycerol degradation to butanol
CTY05_RS08090	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_RS08090	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTY05_RS08110	PWY-5101	L-isoleucine biosynthesis II
CTY05_RS08110	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS08110	PWY-5104	L-isoleucine biosynthesis IV
CTY05_RS08110	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS08130	PWY-5451	acetone degradation I (to methylglyoxal)
CTY05_RS08130	PWY-6588	pyruvate fermentation to acetone
CTY05_RS08130	PWY-6876	isopropanol biosynthesis
CTY05_RS08130	PWY-7466	acetone degradation III (to propane-1,2-diol)
CTY05_RS08195	PWY-5451	acetone degradation I (to methylglyoxal)
CTY05_RS08195	PWY-6588	pyruvate fermentation to acetone
CTY05_RS08195	PWY-6876	isopropanol biosynthesis
CTY05_RS08195	PWY-7466	acetone degradation III (to propane-1,2-diol)
CTY05_RS08235	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CTY05_RS08370	PWY-5101	L-isoleucine biosynthesis II
CTY05_RS08370	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS08370	PWY-5104	L-isoleucine biosynthesis IV
CTY05_RS08370	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS08415	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_RS08425	PWY-2201	folate transformations I
CTY05_RS08425	PWY-3841	folate transformations II
CTY05_RS08435	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_RS08470	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_RS08470	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_RS08470	PWY-6596	adenosine nucleotides degradation I
CTY05_RS08470	PWY-6606	guanosine nucleotides degradation II
CTY05_RS08470	PWY-6607	guanosine nucleotides degradation I
CTY05_RS08470	PWY-6608	guanosine nucleotides degradation III
CTY05_RS08470	PWY-7185	UTP and CTP dephosphorylation I
CTY05_RS08470	PWY-7821	CTY05_RS08470
CTY05_RS08645	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS08645	PWY-3162	L-tryptophan degradation V (side chain pathway)
CTY05_RS08645	PWY-5057	L-valine degradation II
CTY05_RS08645	PWY-5076	L-leucine degradation III
CTY05_RS08645	PWY-5078	L-isoleucine degradation II
CTY05_RS08645	PWY-5079	L-phenylalanine degradation III
CTY05_RS08645	PWY-5082	L-methionine degradation III
CTY05_RS08645	PWY-5480	pyruvate fermentation to ethanol I
CTY05_RS08645	PWY-5486	pyruvate fermentation to ethanol II
CTY05_RS08645	PWY-5751	phenylethanol biosynthesis
CTY05_RS08645	PWY-6313	serotonin degradation
CTY05_RS08645	PWY-6333	acetaldehyde biosynthesis I
CTY05_RS08645	PWY-6342	noradrenaline and adrenaline degradation
CTY05_RS08645	PWY-6454	vancomycin resistance I
CTY05_RS08645	PWY-6587	pyruvate fermentation to ethanol III
CTY05_RS08645	PWY-6802	salidroside biosynthesis
CTY05_RS08645	PWY-6871	3-methylbutanol biosynthesis
CTY05_RS08645	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS08645	PWY-7013	L-1,2-propanediol degradation
CTY05_RS08645	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS08645	PWY-7118	chitin degradation to ethanol
CTY05_RS08645	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CTY05_RS08645	PWY-7798	CTY05_RS08645
CTY05_RS08690	PWY-7533	gliotoxin biosynthesis
CTY05_RS08705	PWY-6420	pyrroloquinoline quinone biosynthesis
CTY05_RS08735	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CTY05_RS08740	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CTY05_RS08765	PWY-2421	indole-3-acetate degradation VIII (bacterial)
CTY05_RS08765	PWY-5648	2-nitrobenzoate degradation II
CTY05_RS08765	PWY-6079	anthranilate degradation I (aerobic)
CTY05_RS08770	PWY-2421	indole-3-acetate degradation VIII (bacterial)
CTY05_RS08770	PWY-5648	2-nitrobenzoate degradation II
CTY05_RS08770	PWY-6079	anthranilate degradation I (aerobic)
CTY05_RS08880	PWY-5392	reductive TCA cycle II
CTY05_RS08880	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_RS08880	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS08880	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS08880	PWY-6728	methylaspartate cycle
CTY05_RS08880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS08880	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS08880	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_RS08995	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CTY05_RS09000	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CTY05_RS09000	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_RS09020	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTY05_RS09020	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTY05_RS09040	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_RS09140	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS09175	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CTY05_RS09175	PWY-622	starch biosynthesis
CTY05_RS09205	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_RS09205	PWY-6164	3-dehydroquinate biosynthesis I
CTY05_RS09205	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_RS09210	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CTY05_RS09210	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CTY05_RS09210	PWY-6269	adenosylcobalamin salvage from cobinamide II
CTY05_RS09225	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CTY05_RS09225	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CTY05_RS09225	PWY-6269	adenosylcobalamin salvage from cobinamide II
CTY05_RS09230	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CTY05_RS09230	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CTY05_RS09230	PWY-6269	adenosylcobalamin salvage from cobinamide II
CTY05_RS09365	PWY-6823	molybdenum cofactor biosynthesis
CTY05_RS09365	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_RS09365	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_RS09365	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTY05_RS09515	PWY-0	putrescine degradation III
CTY05_RS09515	PWY-6117	spermine and spermidine degradation I
CTY05_RS09520	PWY-6728	methylaspartate cycle
CTY05_RS09520	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS09520	PWY-7118	chitin degradation to ethanol
CTY05_RS09520	PWY-7294	xylose degradation IV
CTY05_RS09520	PWY-7295	L-arabinose degradation IV
CTY05_RS09520	PWY-7854	CTY05_RS09520
CTY05_RS09545	PWY-5686	UMP biosynthesis
CTY05_RS09545	PWY-7790	CTY05_RS09545
CTY05_RS09545	PWY-7791	CTY05_RS09545
CTY05_RS09565	PWY-7205	CMP phosphorylation
CTY05_RS09635	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_RS09695	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS09695	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_RS09695	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS09695	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS09695	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTY05_RS09705	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS09705	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS09705	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_RS09705	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS09705	PWY-7003	glycerol degradation to butanol
CTY05_RS09785	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CTY05_RS09785	PWY-6853	ethylene biosynthesis II (microbes)
CTY05_RS09785	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CTY05_RS09825	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_RS09825	PWY-5723	Rubisco shunt
CTY05_RS09825	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_RS09825	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_RS09825	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS09825	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS09830	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CTY05_RS09830	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CTY05_RS09870	PWY-6938	NADH repair
CTY05_RS09875	PWY-6700	queuosine biosynthesis
CTY05_RS09880	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CTY05_RS10150	PWY-6004	glycine betaine biosynthesis V (from glycine)
CTY05_RS10155	PWY-6936	seleno-amino acid biosynthesis
CTY05_RS10155	PWY-7274	D-cycloserine biosynthesis
CTY05_RS10200	PWY-4202	arsenate detoxification I (glutaredoxin)
CTY05_RS10200	PWY-4621	arsenate detoxification II (glutaredoxin)
CTY05_RS10235	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS10235	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS10325	PWY-4381	fatty acid biosynthesis initiation I
CTY05_RS10325	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CTY05_RS10325	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS10330	PWY-5796	malonate decarboxylase activation
CTY05_RS10335	PWY-6060	malonate degradation II (biotin-dependent)
CTY05_RS10340	PWY-6060	malonate degradation II (biotin-dependent)
CTY05_RS10340	PWY-6679	jadomycin biosynthesis
CTY05_RS10340	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS10350	PWY-5796	malonate decarboxylase activation
CTY05_RS10355	PWY-5794	malonate degradation I (biotin-independent)
CTY05_RS10355	PWY-6060	malonate degradation II (biotin-dependent)
CTY05_RS10395	PWY-4061	glutathione-mediated detoxification I
CTY05_RS10395	PWY-6842	glutathione-mediated detoxification II
CTY05_RS10395	PWY-7112	4-hydroxy-2-nonenal detoxification
CTY05_RS10395	PWY-7533	gliotoxin biosynthesis
CTY05_RS10420	PWY-6936	seleno-amino acid biosynthesis
CTY05_RS10420	PWY-7274	D-cycloserine biosynthesis
CTY05_RS10430	PWY-6823	molybdenum cofactor biosynthesis
CTY05_RS10430	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_RS10430	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_RS10430	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTY05_RS10605	PWY-6679	jadomycin biosynthesis
CTY05_RS10605	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS10690	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS10690	PWY-5109	2-methylbutanoate biosynthesis
CTY05_RS10690	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_RS10690	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_RS10690	PWY-5177	glutaryl-CoA degradation
CTY05_RS10690	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_RS10690	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_RS10690	PWY-6583	pyruvate fermentation to butanol I
CTY05_RS10690	PWY-6863	pyruvate fermentation to hexanol
CTY05_RS10690	PWY-6883	pyruvate fermentation to butanol II
CTY05_RS10690	PWY-6944	androstenedione degradation
CTY05_RS10690	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_RS10690	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_RS10690	PWY-7007	methyl ketone biosynthesis
CTY05_RS10690	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_RS10690	PWY-7094	fatty acid salvage
CTY05_RS10690	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_RS10690	PWY-735	jasmonic acid biosynthesis
CTY05_RS10690	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_RS10690	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_RS10690	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_RS10690	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_RS10690	PWY-7726	CTY05_RS10690
CTY05_RS10690	PWY-7778	CTY05_RS10690
CTY05_RS10690	PWY-7779	CTY05_RS10690
CTY05_RS10690	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CTY05_RS10710	PWY-723	alkylnitronates degradation
CTY05_RS10745	PWY-6832	2-aminoethylphosphonate degradation II
CTY05_RS10965	PWY-1341	phenylacetate degradation II (anaerobic)
CTY05_RS10965	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CTY05_RS10965	PWY-7716	CTY05_RS10965
CTY05_RS10970	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS10970	PWY-2361	3-oxoadipate degradation
CTY05_RS10970	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_RS10975	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS10975	PWY-5109	2-methylbutanoate biosynthesis
CTY05_RS10975	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_RS10975	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_RS10975	PWY-5177	glutaryl-CoA degradation
CTY05_RS10975	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_RS10975	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_RS10975	PWY-6583	pyruvate fermentation to butanol I
CTY05_RS10975	PWY-6863	pyruvate fermentation to hexanol
CTY05_RS10975	PWY-6883	pyruvate fermentation to butanol II
CTY05_RS10975	PWY-6944	androstenedione degradation
CTY05_RS10975	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_RS10975	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_RS10975	PWY-7007	methyl ketone biosynthesis
CTY05_RS10975	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_RS10975	PWY-7094	fatty acid salvage
CTY05_RS10975	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_RS10975	PWY-735	jasmonic acid biosynthesis
CTY05_RS10975	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_RS10975	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_RS10975	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_RS10975	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_RS10975	PWY-7726	CTY05_RS10975
CTY05_RS10975	PWY-7778	CTY05_RS10975
CTY05_RS10975	PWY-7779	CTY05_RS10975
CTY05_RS10975	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CTY05_RS11010	PWY-5176	coumarin biosynthesis (via 2-coumarate)
CTY05_RS11250	PWY-5169	cyanurate degradation
CTY05_RS11250	PWY-5703	urea degradation I
CTY05_RS11250	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_RS11275	PWY-5169	cyanurate degradation
CTY05_RS11275	PWY-5703	urea degradation I
CTY05_RS11430	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS11430	PWY-5109	2-methylbutanoate biosynthesis
CTY05_RS11430	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_RS11430	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_RS11430	PWY-5177	glutaryl-CoA degradation
CTY05_RS11430	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_RS11430	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_RS11430	PWY-6583	pyruvate fermentation to butanol I
CTY05_RS11430	PWY-6863	pyruvate fermentation to hexanol
CTY05_RS11430	PWY-6883	pyruvate fermentation to butanol II
CTY05_RS11430	PWY-6944	androstenedione degradation
CTY05_RS11430	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_RS11430	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_RS11430	PWY-7007	methyl ketone biosynthesis
CTY05_RS11430	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_RS11430	PWY-7094	fatty acid salvage
CTY05_RS11430	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_RS11430	PWY-735	jasmonic acid biosynthesis
CTY05_RS11430	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_RS11430	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_RS11430	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_RS11430	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_RS11430	PWY-7726	CTY05_RS11430
CTY05_RS11430	PWY-7778	CTY05_RS11430
CTY05_RS11430	PWY-7779	CTY05_RS11430
CTY05_RS11430	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CTY05_RS11500	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_RS11555	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_RS11555	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_RS11760	PWY-3341	L-proline biosynthesis III
CTY05_RS11760	PWY-4981	L-proline biosynthesis II (from arginine)
CTY05_RS11760	PWY-6344	L-ornithine degradation II (Stickland reaction)
CTY05_RS11845	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS11905	PWY-4381	fatty acid biosynthesis initiation I
CTY05_RS11980	PWY-5686	UMP biosynthesis
CTY05_RS11980	PWY-7790	CTY05_RS11980
CTY05_RS11980	PWY-7791	CTY05_RS11980
CTY05_RS11990	PWY-6825	phosphatidylcholine biosynthesis V
CTY05_RS12045	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS12055	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS12055	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS12055	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS12055	PWY-7003	glycerol degradation to butanol
CTY05_RS12065	PWY-2941	L-lysine biosynthesis II
CTY05_RS12065	PWY-2942	L-lysine biosynthesis III
CTY05_RS12065	PWY-5097	L-lysine biosynthesis VI
CTY05_RS12065	PWY-6559	spermidine biosynthesis II
CTY05_RS12065	PWY-6562	norspermidine biosynthesis
CTY05_RS12065	PWY-7153	grixazone biosynthesis
CTY05_RS12090	PWY-6610	adenine and adenosine salvage IV
CTY05_RS12245	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
CTY05_RS12260	PWY-6486	D-galacturonate degradation II
CTY05_RS12260	PWY-6497	D-galactarate degradation II
CTY05_RS12260	PWY-6499	D-glucarate degradation II
CTY05_RS12260	PWY-6501	D-glucuronate degradation II
CTY05_RS12265	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS12265	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_RS12265	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_RS12265	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS12265	PWY-5723	Rubisco shunt
CTY05_RS12265	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS12265	PWY-6499	D-glucarate degradation II
CTY05_RS12265	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_RS12265	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS12265	PWY-7003	glycerol degradation to butanol
CTY05_RS12265	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_RS12265	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTY05_RS12275	PWY-6497	D-galactarate degradation II
CTY05_RS12440	PWY-4983	L-citrulline-nitric oxide cycle
CTY05_RS12440	PWY-4984	urea cycle
CTY05_RS12440	PWY-5	canavanine biosynthesis
CTY05_RS12440	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS12440	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS12450	PWY-5686	UMP biosynthesis
CTY05_RS12450	PWY-7790	CTY05_RS12450
CTY05_RS12450	PWY-7791	CTY05_RS12450
CTY05_RS12545	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_RS12545	PWY-7761	CTY05_RS12545
CTY05_RS12565	PWY-2201	folate transformations I
CTY05_RS12895	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CTY05_RS12895	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTY05_RS13010	PWY-6825	phosphatidylcholine biosynthesis V
CTY05_RS13040	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS13085	PWY-5704	urea degradation II
CTY05_RS13090	PWY-5704	urea degradation II
CTY05_RS13095	PWY-5704	urea degradation II
CTY05_RS13115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS13150	PWY-5278	sulfite oxidation III
CTY05_RS13150	PWY-5340	sulfate activation for sulfonation
CTY05_RS13150	PWY-6683	sulfate reduction III (assimilatory)
CTY05_RS13150	PWY-6932	selenate reduction
CTY05_RS13155	PWY-5278	sulfite oxidation III
CTY05_RS13155	PWY-5340	sulfate activation for sulfonation
CTY05_RS13155	PWY-6683	sulfate reduction III (assimilatory)
CTY05_RS13155	PWY-6932	selenate reduction
CTY05_RS13245	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_RS13245	PWY-5743	3-hydroxypropanoate cycle
CTY05_RS13245	PWY-5744	glyoxylate assimilation
CTY05_RS13245	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_RS13245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS13245	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_RS13245	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_RS13305	PWY-2201	folate transformations I
CTY05_RS13305	PWY-3841	folate transformations II
CTY05_RS13315	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_RS13315	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_RS13315	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS13345	PWY-6317	galactose degradation I (Leloir pathway)
CTY05_RS13530	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CTY05_RS13530	PWY-7494	choline degradation IV
CTY05_RS13535	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CTY05_RS13535	PWY-7494	choline degradation IV
CTY05_RS13540	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS13610	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_RS13635	PWY-4041	&gamma;-glutamyl cycle
CTY05_RS13635	PWY-5826	hypoglycin biosynthesis
CTY05_RS13655	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_RS13655	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTY05_RS13695	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_RS13750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS13750	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS13755	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_RS13820	PWY-7801	CTY05_RS13820
CTY05_RS13825	PWY-7799	CTY05_RS13825
CTY05_RS13835	PWY-6855	chitin degradation I (archaea)
CTY05_RS13835	PWY-6902	chitin degradation II
CTY05_RS13835	PWY-7822	CTY05_RS13835
CTY05_RS13890	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_RS13890	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CTY05_RS13890	PWY-7761	CTY05_RS13890
CTY05_RS13960	PWY-7851	CTY05_RS13960
CTY05_RS13995	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_RS14010	PWY-7560	methylerythritol phosphate pathway II
CTY05_RS14045	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CTY05_RS14050	PWY-5155	&beta;-alanine biosynthesis III
CTY05_RS14065	PWY-6167	flavin biosynthesis II (archaea)
CTY05_RS14065	PWY-6168	flavin biosynthesis III (fungi)
CTY05_RS14090	PWY-5367	petroselinate biosynthesis
CTY05_RS14090	PWY-5515	L-arabinose degradation II
CTY05_RS14090	PWY-5525	D-glucuronate degradation I
CTY05_RS14090	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTY05_RS14090	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTY05_RS14090	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTY05_RS14090	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTY05_RS14090	PWY-6113	superpathway of mycolate biosynthesis
CTY05_RS14090	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTY05_RS14090	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_RS14090	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS14090	PWY-7663	gondoate biosynthesis (anaerobic)
CTY05_RS14090	PWY-7664	oleate biosynthesis IV (anaerobic)
CTY05_RS14090	PWY-7858	CTY05_RS14090
CTY05_RS14090	PWYG-321	mycolate biosynthesis
CTY05_RS14095	PWY-4381	fatty acid biosynthesis initiation I
CTY05_RS14095	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CTY05_RS14095	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS14135	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CTY05_RS14140	PWY-2201	folate transformations I
CTY05_RS14140	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_RS14210	PWY-3961	phosphopantothenate biosynthesis II
CTY05_RS14260	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS14375	PWY-7183	pyrimidine nucleobases salvage I
CTY05_RS14470	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_RS14470	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS14470	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_RS14470	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_RS14470	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS14470	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS14470	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS14470	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTY05_RS14480	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_RS14480	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS14480	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_RS14480	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_RS14480	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS14480	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS14480	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS14480	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTY05_RS14535	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CTY05_RS14535	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CTY05_RS14535	PWY-6936	seleno-amino acid biosynthesis
CTY05_RS14535	PWY-702	L-methionine biosynthesis II
CTY05_RS14635	PWY-6609	adenine and adenosine salvage III
CTY05_RS14635	PWY-6611	adenine and adenosine salvage V
CTY05_RS14635	PWY-7179	purine deoxyribonucleosides degradation I
CTY05_RS14635	PWY-7179-1	purine deoxyribonucleosides degradation
CTY05_RS14665	PWY-5316	nicotine biosynthesis
CTY05_RS14665	PWY-7342	superpathway of nicotine biosynthesis
CTY05_RS14670	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS14710	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_RS14710	PWY-5723	Rubisco shunt
CTY05_RS14720	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS14735	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CTY05_RS14735	PWY-5368	dimorphecolate biosynthesis
CTY05_RS14735	PWY-5995	linoleate biosynthesis I (plants)
CTY05_RS14735	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CTY05_RS14735	PWY-6803	phosphatidylcholine acyl editing
CTY05_RS14735	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CTY05_RS14735	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CTY05_RS14735	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CTY05_RS14735	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CTY05_RS14735	PWY-7470	phosphatidylcholine biosynthesis VII
CTY05_RS14735	PWY-7618	ricinoleate biosynthesis
CTY05_RS14785	PWY-5958	acridone alkaloid biosynthesis
CTY05_RS14785	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CTY05_RS14785	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CTY05_RS14805	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS14805	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS14915	PWY-3341	L-proline biosynthesis III
CTY05_RS14915	PWY-4981	L-proline biosynthesis II (from arginine)
CTY05_RS14915	PWY-6344	L-ornithine degradation II (Stickland reaction)
CTY05_RS14925	PWY-6679	jadomycin biosynthesis
CTY05_RS14925	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_RS14940	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS15040	PWY-6654	phosphopantothenate biosynthesis III
CTY05_RS15045	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_RS15045	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_RS15045	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTY05_RS15045	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_RS15045	PWY-7852	CTY05_RS15045
CTY05_RS15045	PWY-7853	CTY05_RS15045
CTY05_RS15085	PWY-6936	seleno-amino acid biosynthesis
CTY05_RS15225	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS15225	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS15230	PWY-5101	L-isoleucine biosynthesis II
CTY05_RS15230	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS15230	PWY-5104	L-isoleucine biosynthesis IV
CTY05_RS15230	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CTY05_RS15230	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CTY05_RS15230	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CTY05_RS15230	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS15235	PWY-5101	L-isoleucine biosynthesis II
CTY05_RS15235	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS15235	PWY-5104	L-isoleucine biosynthesis IV
CTY05_RS15235	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CTY05_RS15235	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CTY05_RS15235	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CTY05_RS15235	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS15275	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTY05_RS15275	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTY05_RS15275	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTY05_RS15275	PWY-6113	superpathway of mycolate biosynthesis
CTY05_RS15275	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTY05_RS15275	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_RS15275	PWY-7663	gondoate biosynthesis (anaerobic)
CTY05_RS15275	PWY-7664	oleate biosynthesis IV (anaerobic)
CTY05_RS15275	PWY-7858	CTY05_RS15275
CTY05_RS15275	PWYG-321	mycolate biosynthesis
CTY05_RS15310	PWY-6012	acyl carrier protein metabolism I
CTY05_RS15310	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTY05_RS15350	PWY-2201	folate transformations I
CTY05_RS15355	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_RS15355	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTY05_RS15355	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS15355	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS15355	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTY05_RS15355	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_RS15355	PWY-7205	CMP phosphorylation
CTY05_RS15355	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_RS15355	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS15355	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS15355	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS15355	PWY-7224	purine deoxyribonucleosides salvage
CTY05_RS15355	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS15355	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTY05_RS15380	PWY-6902	chitin degradation II
CTY05_RS15380	PWY-7822	CTY05_RS15380
CTY05_RS15395	PWY-3341	L-proline biosynthesis III
CTY05_RS15395	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CTY05_RS15405	PWY-5530	sorbitol biosynthesis II
CTY05_RS15405	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_RS15415	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_RS15415	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CTY05_RS15415	PWY-7242	D-fructuronate degradation
CTY05_RS15415	PWY-7310	D-glucosaminate degradation
CTY05_RS15415	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
CTY05_RS15420	PWY-5101	L-isoleucine biosynthesis II
CTY05_RS15420	PWY-5103	L-isoleucine biosynthesis III
CTY05_RS15420	PWY-5104	L-isoleucine biosynthesis IV
CTY05_RS15420	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_RS15425	PWY-5482	pyruvate fermentation to acetate II
CTY05_RS15425	PWY-5485	pyruvate fermentation to acetate IV
CTY05_RS15425	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS15430	PWY-1281	sulfoacetaldehyde degradation I
CTY05_RS15430	PWY-5482	pyruvate fermentation to acetate II
CTY05_RS15430	PWY-5485	pyruvate fermentation to acetate IV
CTY05_RS15430	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS15430	PWY-6637	sulfolactate degradation II
CTY05_RS15435	PWY-5392	reductive TCA cycle II
CTY05_RS15435	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_RS15435	PWY-5690	TCA cycle II (plants and fungi)
CTY05_RS15435	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS15435	PWY-6728	methylaspartate cycle
CTY05_RS15435	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_RS15435	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_RS15435	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_RS15475	PWY-6871	3-methylbutanol biosynthesis
CTY05_RS15480	PWY-5344	L-homocysteine biosynthesis
CTY05_RS15550	PWY-3841	folate transformations II
CTY05_RS15550	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_RS15550	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_RS15550	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_RS15550	PWY-7199	pyrimidine deoxyribonucleosides salvage
CTY05_RS15550	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_RS15555	PWY-3841	folate transformations II
CTY05_RS15555	PWY-6614	tetrahydrofolate biosynthesis
CTY05_RS15585	PWY-2201	folate transformations I
CTY05_RS15585	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS15705	PWY-2941	L-lysine biosynthesis II
CTY05_RS15705	PWY-2942	L-lysine biosynthesis III
CTY05_RS15705	PWY-5097	L-lysine biosynthesis VI
CTY05_RS15705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS15705	PWY-6559	spermidine biosynthesis II
CTY05_RS15705	PWY-6562	norspermidine biosynthesis
CTY05_RS15705	PWY-7153	grixazone biosynthesis
CTY05_RS15705	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS15750	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CTY05_RS15795	PWY-5506	methanol oxidation to formaldehyde IV
CTY05_RS15915	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_RS15950	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS15950	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS16085	PWY-5839	menaquinol-7 biosynthesis
CTY05_RS16085	PWY-5844	menaquinol-9 biosynthesis
CTY05_RS16085	PWY-5849	menaquinol-6 biosynthesis
CTY05_RS16085	PWY-5890	menaquinol-10 biosynthesis
CTY05_RS16085	PWY-5891	menaquinol-11 biosynthesis
CTY05_RS16085	PWY-5892	menaquinol-12 biosynthesis
CTY05_RS16085	PWY-5895	menaquinol-13 biosynthesis
CTY05_RS16190	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS16190	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS16190	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS16190	PWY-7003	glycerol degradation to butanol
CTY05_RS16210	PWY-7851	CTY05_RS16210
CTY05_RS16280	PWY-5269	cardiolipin biosynthesis II
CTY05_RS16280	PWY-5668	cardiolipin biosynthesis I
CTY05_RS16280	PWY-7817	CTY05_RS16280
CTY05_RS16310	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_RS16310	PWY-5109	2-methylbutanoate biosynthesis
CTY05_RS16310	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_RS16310	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
CTY05_RS16310	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_RS16310	PWY-5177	glutaryl-CoA degradation
CTY05_RS16310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_RS16310	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_RS16310	PWY-6583	pyruvate fermentation to butanol I
CTY05_RS16310	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
CTY05_RS16310	PWY-6863	pyruvate fermentation to hexanol
CTY05_RS16310	PWY-6883	pyruvate fermentation to butanol II
CTY05_RS16310	PWY-6944	androstenedione degradation
CTY05_RS16310	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_RS16310	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_RS16310	PWY-7007	methyl ketone biosynthesis
CTY05_RS16310	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_RS16310	PWY-7094	fatty acid salvage
CTY05_RS16310	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_RS16310	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
CTY05_RS16310	PWY-735	jasmonic acid biosynthesis
CTY05_RS16310	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_RS16310	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_RS16310	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_RS16310	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_RS16310	PWY-7726	CTY05_RS16310
CTY05_RS16310	PWY-7778	CTY05_RS16310
CTY05_RS16310	PWY-7779	CTY05_RS16310
CTY05_RS16310	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CTY05_RS16315	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_RS16315	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_RS16315	PWY-6863	pyruvate fermentation to hexanol
CTY05_RS16315	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_RS16315	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_RS16315	PWY-6948	sitosterol degradation to androstenedione
CTY05_RS16315	PWY-7094	fatty acid salvage
CTY05_RS16315	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
CTY05_RS16315	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
CTY05_RS16315	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
CTY05_RS16315	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
CTY05_RS16315	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
CTY05_RS16315	PWY-735	jasmonic acid biosynthesis
CTY05_RS16315	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_RS16315	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_RS16315	PWY-7726	CTY05_RS16315
CTY05_RS16465	PWY-5958	acridone alkaloid biosynthesis
CTY05_RS16465	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CTY05_RS16465	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CTY05_RS16470	PWY-181	photorespiration
CTY05_RS16515	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_RS16515	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTY05_RS16520	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_RS16520	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTY05_RS16535	PWY-4983	L-citrulline-nitric oxide cycle
CTY05_RS16535	PWY-4984	urea cycle
CTY05_RS16535	PWY-5	canavanine biosynthesis
CTY05_RS16535	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS16535	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_RS16570	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CTY05_RS16600	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_RS16600	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_RS16665	PWY-1042	glycolysis IV (plant cytosol)
CTY05_RS16665	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_RS16665	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_RS16665	PWY-5723	Rubisco shunt
CTY05_RS16665	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS16665	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_RS16665	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS16665	PWY-7003	glycerol degradation to butanol
CTY05_RS16665	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_RS16665	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTY05_RS16700	PWY-6167	flavin biosynthesis II (archaea)
CTY05_RS16700	PWY-6168	flavin biosynthesis III (fungi)
CTY05_RS16700	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS16710	PWY-5525	D-glucuronate degradation I
CTY05_RS16765	PWY-7805	CTY05_RS16765
CTY05_RS16765	PWY-7807	CTY05_RS16765
CTY05_RS16870	PWY-6936	seleno-amino acid biosynthesis
CTY05_RS16985	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS16995	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS17100	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_RS17155	PWY-6012	acyl carrier protein metabolism I
CTY05_RS17155	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTY05_RS17205	PWY-6157	autoinducer AI-1 biosynthesis
CTY05_RS17240	PWY-5642	2,4-dinitrotoluene degradation
CTY05_RS17240	PWY-6373	acrylate degradation
CTY05_RS17265	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_RS17360	PWY-5747	2-methylcitrate cycle II
CTY05_RS17370	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_RS17370	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CTY05_RS17370	PWY-6638	sulfolactate degradation III
CTY05_RS17370	PWY-6642	(<i>R</i>)-cysteate degradation
CTY05_RS17370	PWY-6643	coenzyme M biosynthesis II
CTY05_RS17370	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_RS17370	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_RS17370	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_RS17375	PWY-6454	vancomycin resistance I
CTY05_RS17375	PWY-6901	superpathway of glucose and xylose degradation
CTY05_RS17395	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_RS17400	PWY-3801	sucrose degradation II (sucrose synthase)
CTY05_RS17400	PWY-5054	sorbitol biosynthesis I
CTY05_RS17400	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CTY05_RS17400	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTY05_RS17400	PWY-5659	GDP-mannose biosynthesis
CTY05_RS17400	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_RS17400	PWY-621	sucrose degradation III (sucrose invertase)
CTY05_RS17400	PWY-622	starch biosynthesis
CTY05_RS17400	PWY-6981	chitin biosynthesis
CTY05_RS17400	PWY-6992	1,5-anhydrofructose degradation
CTY05_RS17400	PWY-7238	sucrose biosynthesis II
CTY05_RS17400	PWY-7347	sucrose biosynthesis III
CTY05_RS17400	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTY05_RS17405	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
CTY05_RS17405	PWY-7820	CTY05_RS17405
CTY05_RS17410	PWY-3801	sucrose degradation II (sucrose synthase)
CTY05_RS17410	PWY-6527	stachyose degradation
CTY05_RS17410	PWY-7238	sucrose biosynthesis II
CTY05_RS17410	PWY-7343	UDP-glucose biosynthesis
CTY05_RS17410	PWY-7817	CTY05_RS17410
CTY05_RS17505	PWY-5316	nicotine biosynthesis
CTY05_RS17505	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_RS17505	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CTY05_RS17505	PWY-7342	superpathway of nicotine biosynthesis
CTY05_RS17515	PWY-7782	CTY05_RS17515
CTY05_RS17515	PWY-7783	CTY05_RS17515
CTY05_RS17555	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CTY05_RS17555	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CTY05_RS17555	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CTY05_RS17555	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CTY05_RS17555	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
CTY05_RS17555	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
CTY05_RS17555	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
CTY05_RS17555	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CTY05_RS17555	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CTY05_RS17555	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
CTY05_RS17580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_RS17625	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CTY05_RS17625	PWY-6167	flavin biosynthesis II (archaea)
CTY05_RS17625	PWY-6168	flavin biosynthesis III (fungi)
CTY05_RS17625	PWY-7863	CTY05_RS17625
CTY05_RS17745	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_RS17745	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_RS17795	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_RS17795	PWY-6606	guanosine nucleotides degradation II
CTY05_RS17795	PWY-6608	guanosine nucleotides degradation III
CTY05_RS17795	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CTY05_RS17800	PWY-6599	guanine and guanosine salvage II
CTY05_RS17800	PWY-6609	adenine and adenosine salvage III
CTY05_RS17800	PWY-6610	adenine and adenosine salvage IV
CTY05_RS17800	PWY-6620	guanine and guanosine salvage