locus-tag class description ABBFA_RS00005 PF11638 DnaA N-terminal domain ABBFA_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ABBFA_RS00005 PF00308 Bacterial dnaA protein ABBFA_RS00010 PF02767 DNA polymerase III beta subunit, central domain ABBFA_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ABBFA_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ABBFA_RS00015 PF02463 RecF/RecN/SMC N terminal domain ABBFA_RS00020 PF00204 DNA gyrase B ABBFA_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus ABBFA_RS00020 PF18053 DNA gyrase B subunit insert domain ABBFA_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS00020 PF01751 Toprim domain ABBFA_RS00030 PF09335 SNARE associated Golgi protein ABBFA_RS00035 PF00005 ABC transporter ABBFA_RS00035 PF12848 ABC transporter ABBFA_RS00055 PF01521 Iron-sulphur cluster biosynthesis ABBFA_RS00060 PF00561 alpha/beta hydrolase fold ABBFA_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase ABBFA_RS00070 PF00579 tRNA synthetases class I (W and Y) ABBFA_RS00115 PF00209 Sodium:neurotransmitter symporter family ABBFA_RS00125 PF01189 16S rRNA methyltransferase RsmB/F ABBFA_RS00125 PF01029 NusB family ABBFA_RS00130 PF02911 Formyl transferase, C-terminal domain ABBFA_RS00130 PF00551 Formyl transferase ABBFA_RS00135 PF00920 Dehydratase family ABBFA_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS00150 PF03466 LysR substrate binding domain ABBFA_RS00155 PF00860 Permease family ABBFA_RS00160 PF00311 Phosphoenolpyruvate carboxylase ABBFA_RS00165 PF08361 MAATS-type transcriptional repressor, C-terminal region ABBFA_RS00165 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABBFA_RS00175 PF00873 AcrB/AcrD/AcrF family ABBFA_RS00185 PF00226 DnaJ domain ABBFA_RS00185 PF01556 DnaJ C terminal domain ABBFA_RS00185 PF00684 DnaJ central domain ABBFA_RS00195 PF05173 Dihydrodipicolinate reductase, C-terminus ABBFA_RS00195 PF01113 Dihydrodipicolinate reductase, N-terminus ABBFA_RS00205 PF07690 Major Facilitator Superfamily ABBFA_RS00210 PF00248 Aldo/keto reductase family ABBFA_RS00215 PF03466 LysR substrate binding domain ABBFA_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS00230 PF00155 Aminotransferase class I and II ABBFA_RS00230 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS00235 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS00235 PF00107 Zinc-binding dehydrogenase ABBFA_RS00240 PF03352 Methyladenine glycosylase ABBFA_RS00255 PF10576 Iron-sulfur binding domain of endonuclease III ABBFA_RS00255 PF00633 Helix-hairpin-helix motif ABBFA_RS00255 PF00730 HhH-GPD superfamily base excision DNA repair protein ABBFA_RS00255 PF14815 NUDIX domain ABBFA_RS00270 PF07043 Protein of unknown function (DUF1328) ABBFA_RS00275 PF03692 Putative zinc- or iron-chelating domain ABBFA_RS00280 PF07995 Glucose / Sorbosone dehydrogenase ABBFA_RS00285 PF12002 MgsA AAA+ ATPase C terminal ABBFA_RS00285 PF16193 AAA C-terminal domain ABBFA_RS00285 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS00290 PF01226 Formate/nitrite transporter ABBFA_RS00300 PF01259 SAICAR synthetase ABBFA_RS00310 PF00701 Dihydrodipicolinate synthetase family ABBFA_RS00315 PF00857 Isochorismatase family ABBFA_RS00320 PF01758 Sodium Bile acid symporter family ABBFA_RS00325 PF01554 MatE ABBFA_RS00330 PF04463 Protein of unknown function (DUF523) ABBFA_RS00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABBFA_RS00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABBFA_RS00350 PF02798 Glutathione S-transferase, N-terminal domain ABBFA_RS00350 PF14497 Glutathione S-transferase, C-terminal domain ABBFA_RS00360 PF00324 Amino acid permease ABBFA_RS00370 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABBFA_RS00370 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABBFA_RS00380 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS00380 PF07702 UTRA domain ABBFA_RS00385 PF05962 HutD ABBFA_RS00390 PF17391 Urocanase N-terminal domain ABBFA_RS00390 PF01175 Urocanase Rossmann-like domain ABBFA_RS00390 PF17392 Urocanase C-terminal domain ABBFA_RS00395 PF00221 Aromatic amino acid lyase ABBFA_RS00400 PF00324 Amino acid permease ABBFA_RS00405 PF01979 Amidohydrolase family ABBFA_RS00410 PF00491 Arginase family ABBFA_RS00425 PF01177 Asp/Glu/Hydantoin racemase ABBFA_RS00440 PF00145 C-5 cytosine-specific DNA methylase ABBFA_RS00445 PF01119 DNA mismatch repair protein, C-terminal domain ABBFA_RS00445 PF08676 MutL C terminal dimerisation domain ABBFA_RS00460 PF01380 SIS domain ABBFA_RS00465 PF14602 Hexapeptide repeat of succinyl-transferase ABBFA_RS00465 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS00465 PF12804 MobA-like NTP transferase domain ABBFA_RS00470 PF04608 Phosphatidylglycerophosphatase A ABBFA_RS00475 PF00586 AIR synthase related protein, N-terminal domain ABBFA_RS00475 PF02769 AIR synthase related protein, C-terminal domain ABBFA_RS00480 PF01029 NusB family ABBFA_RS00485 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABBFA_RS00490 PF00925 GTP cyclohydrolase II ABBFA_RS00490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABBFA_RS00520 PF02580 D-Tyr-tRNA(Tyr) deacylase ABBFA_RS00525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABBFA_RS00525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABBFA_RS00530 PF00581 Rhodanese-like domain ABBFA_RS00535 PF02666 Phosphatidylserine decarboxylase ABBFA_RS00545 PF11808 Phosphate regulon sensor protein PhoR ABBFA_RS00545 PF00989 PAS fold ABBFA_RS00545 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS00550 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS00550 PF00072 Response regulator receiver domain ABBFA_RS00560 PF00106 short chain dehydrogenase ABBFA_RS00565 PF01554 MatE ABBFA_RS00570 PF00155 Aminotransferase class I and II ABBFA_RS00575 PF04286 Protein of unknown function (DUF445) ABBFA_RS00590 PF04262 Glutamate-cysteine ligase ABBFA_RS00595 PF02600 Disulfide bond formation protein DsbB ABBFA_RS00600 PF13296 Putative type VI secretion system Rhs element Vgr ABBFA_RS00600 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABBFA_RS00600 PF04717 Type VI secretion system, phage-baseplate injector ABBFA_RS00605 PF01510 N-acetylmuramoyl-L-alanine amidase ABBFA_RS00605 PF01476 LysM domain ABBFA_RS00605 PF01471 Putative peptidoglycan binding domain ABBFA_RS00635 PF05728 Uncharacterised protein family (UPF0227) ABBFA_RS00640 PF01751 Toprim domain ABBFA_RS00640 PF00986 DNA gyrase B subunit, carboxyl terminus ABBFA_RS00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS00640 PF00204 DNA gyrase B ABBFA_RS00645 PF04115 Ureidoglycolate lyase ABBFA_RS00650 PF03561 Allantoicase repeat ABBFA_RS00655 PF01494 FAD binding domain ABBFA_RS00665 PF00860 Permease family ABBFA_RS00670 PF00576 HIUase/Transthyretin family ABBFA_RS00700 PF02683 Cytochrome C biogenesis protein transmembrane region ABBFA_RS00700 PF11412 Disulphide bond corrector protein DsbC ABBFA_RS00705 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS00705 PF07694 5TMR of 5TMR-LYT ABBFA_RS00710 PF07859 alpha/beta hydrolase fold ABBFA_RS00720 PF03960 ArsC family ABBFA_RS00725 PF03372 Endonuclease/Exonuclease/phosphatase family ABBFA_RS00730 PF00156 Phosphoribosyl transferase domain ABBFA_RS00735 PF00593 TonB dependent receptor ABBFA_RS00735 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS00745 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABBFA_RS00745 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABBFA_RS00750 PF03033 Glycosyltransferase family 28 N-terminal domain ABBFA_RS00750 PF04101 Glycosyltransferase family 28 C-terminal domain ABBFA_RS00755 PF08245 Mur ligase middle domain ABBFA_RS00755 PF02875 Mur ligase family, glutamate ligase domain ABBFA_RS00755 PF01225 Mur ligase family, catalytic domain ABBFA_RS00760 PF01820 D-ala D-ala ligase N-terminus ABBFA_RS00760 PF07478 D-ala D-ala ligase C-terminus ABBFA_RS00765 PF08478 POTRA domain, FtsQ-type ABBFA_RS00765 PF03799 Cell division protein FtsQ ABBFA_RS00770 PF02491 SHS2 domain inserted in FTSA ABBFA_RS00775 PF00091 Tubulin/FtsZ family, GTPase domain ABBFA_RS00775 PF12327 FtsZ family, C-terminal domain ABBFA_RS00780 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABBFA_RS00790 PF01551 Peptidase family M23 ABBFA_RS00795 PF17831 Pyruvate dehydrogenase E1 component middle domain ABBFA_RS00795 PF00456 Transketolase, thiamine diphosphate binding domain ABBFA_RS00800 PF02817 e3 binding domain ABBFA_RS00800 PF00364 Biotin-requiring enzyme ABBFA_RS00800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABBFA_RS00810 PF01169 Uncharacterized protein family UPF0016 ABBFA_RS00815 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS00815 PF00593 TonB dependent receptor ABBFA_RS00820 PF00258 Flavodoxin ABBFA_RS00820 PF01613 Flavin reductase like domain ABBFA_RS00825 PF03692 Putative zinc- or iron-chelating domain ABBFA_RS00830 PF00478 IMP dehydrogenase / GMP reductase domain ABBFA_RS00830 PF00571 CBS domain ABBFA_RS00835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABBFA_RS00835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABBFA_RS00835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABBFA_RS00835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABBFA_RS00840 PF01243 Pyridoxamine 5'-phosphate oxidase ABBFA_RS00840 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABBFA_RS00845 PF01368 DHH family ABBFA_RS00845 PF02272 DHHA1 domain ABBFA_RS00845 PF17768 RecJ OB domain ABBFA_RS00865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABBFA_RS00870 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABBFA_RS00875 PF04452 RNA methyltransferase ABBFA_RS00880 PF00924 Mechanosensitive ion channel ABBFA_RS00890 PF00501 AMP-binding enzyme ABBFA_RS00890 PF16177 Acetyl-coenzyme A synthetase N-terminus ABBFA_RS00890 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS00895 PF00857 Isochorismatase family ABBFA_RS00900 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS00905 PF00296 Luciferase-like monooxygenase ABBFA_RS00910 PF03358 NADPH-dependent FMN reductase ABBFA_RS00915 PF00072 Response regulator receiver domain ABBFA_RS00915 PF00196 Bacterial regulatory proteins, luxR family ABBFA_RS00925 PF00072 Response regulator receiver domain ABBFA_RS00925 PF01627 Hpt domain ABBFA_RS00925 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS00925 PF00672 HAMP domain ABBFA_RS00930 PF04341 Protein of unknown function, DUF485 ABBFA_RS00935 PF00474 Sodium:solute symporter family ABBFA_RS00945 PF02028 BCCT, betaine/carnitine/choline family transporter ABBFA_RS00955 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS00960 PF17760 UvrA interaction domain ABBFA_RS00960 PF17755 UvrA DNA-binding domain ABBFA_RS00960 PF00005 ABC transporter ABBFA_RS00965 PF16925 Tetracyclin repressor-like, C-terminal domain ABBFA_RS00965 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS00970 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS00970 PF00107 Zinc-binding dehydrogenase ABBFA_RS00980 PF06942 GlpM protein ABBFA_RS00985 PF03070 TENA/THI-4/PQQC family ABBFA_RS00985 PF02581 Thiamine monophosphate synthase ABBFA_RS00985 PF08543 Phosphomethylpyrimidine kinase ABBFA_RS00995 PF07690 Major Facilitator Superfamily ABBFA_RS01000 PF00436 Single-strand binding protein family ABBFA_RS01010 PF03591 AzlC protein ABBFA_RS01020 PF00324 Amino acid permease ABBFA_RS01025 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS01025 PF00155 Aminotransferase class I and II ABBFA_RS01030 PF00202 Aminotransferase class-III ABBFA_RS01035 PF00171 Aldehyde dehydrogenase family ABBFA_RS01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS01045 PF00857 Isochorismatase family ABBFA_RS01050 PF02678 Pirin ABBFA_RS01050 PF05726 Pirin C-terminal cupin domain ABBFA_RS01055 PF01593 Flavin containing amine oxidoreductase ABBFA_RS01070 PF01555 DNA methylase ABBFA_RS01075 PF09516 CfrBI restriction endonuclease ABBFA_RS01100 PF12102 Domain of unknown function (DUF3578) ABBFA_RS01100 PF07728 AAA domain (dynein-related subfamily) ABBFA_RS01140 PF12146 Serine aminopeptidase, S33 ABBFA_RS01145 PF03466 LysR substrate binding domain ABBFA_RS01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS01150 PF13533 Biotin-lipoyl like ABBFA_RS01160 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS01160 PF17932 Tetracyclin repressor-like, C-terminal domain ABBFA_RS01230 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS01250 PF07690 Major Facilitator Superfamily ABBFA_RS01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS01255 PF03466 LysR substrate binding domain ABBFA_RS01275 PF00248 Aldo/keto reductase family ABBFA_RS01280 PF12833 Helix-turn-helix domain ABBFA_RS01280 PF02311 AraC-like ligand binding domain ABBFA_RS01300 PF01638 HxlR-like helix-turn-helix ABBFA_RS01315 PF01638 HxlR-like helix-turn-helix ABBFA_RS01325 PF02525 Flavodoxin-like fold ABBFA_RS01335 PF13302 Acetyltransferase (GNAT) domain ABBFA_RS01345 PF02705 K+ potassium transporter ABBFA_RS01375 PF00230 Major intrinsic protein ABBFA_RS01390 PF00977 Histidine biosynthesis protein ABBFA_RS01395 PF01636 Phosphotransferase enzyme family ABBFA_RS01420 PF00977 Histidine biosynthesis protein ABBFA_RS01435 PF00117 Glutamine amidotransferase class-I ABBFA_RS01440 PF00475 Imidazoleglycerol-phosphate dehydratase ABBFA_RS01460 PF00583 Acetyltransferase (GNAT) family ABBFA_RS01465 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABBFA_RS01465 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABBFA_RS01475 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS01475 PF00672 HAMP domain ABBFA_RS01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS01480 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS01480 PF00072 Response regulator receiver domain ABBFA_RS01485 PF16921 Tex protein YqgF-like domain ABBFA_RS01485 PF09371 Tex-like protein N-terminal domain ABBFA_RS01485 PF00575 S1 RNA binding domain ABBFA_RS01485 PF17674 HHH domain ABBFA_RS01490 PF01740 STAS domain ABBFA_RS01490 PF00916 Sulfate permease family ABBFA_RS01495 PF00106 short chain dehydrogenase ABBFA_RS01500 PF01053 Cys/Met metabolism PLP-dependent enzyme ABBFA_RS01505 PF12848 ABC transporter ABBFA_RS01505 PF00005 ABC transporter ABBFA_RS01530 PF00529 HlyD membrane-fusion protein of T1SS ABBFA_RS01530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABBFA_RS01535 PF00873 AcrB/AcrD/AcrF family ABBFA_RS01540 PF01545 Cation efflux family ABBFA_RS01570 PF00324 Amino acid permease ABBFA_RS01585 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABBFA_RS01600 PF01795 MraW methylase family ABBFA_RS01610 PF03717 Penicillin-binding Protein dimerisation domain ABBFA_RS01610 PF00905 Penicillin binding protein transpeptidase domain ABBFA_RS01615 PF01225 Mur ligase family, catalytic domain ABBFA_RS01615 PF08245 Mur ligase middle domain ABBFA_RS01615 PF02875 Mur ligase family, glutamate ligase domain ABBFA_RS01620 PF02875 Mur ligase family, glutamate ligase domain ABBFA_RS01620 PF01225 Mur ligase family, catalytic domain ABBFA_RS01620 PF08245 Mur ligase middle domain ABBFA_RS01625 PF00953 Glycosyl transferase family 4 ABBFA_RS01635 PF13847 Methyltransferase domain ABBFA_RS01640 PF00905 Penicillin binding protein transpeptidase domain ABBFA_RS01640 PF00912 Transglycosylase ABBFA_RS01640 PF17092 Penicillin-binding protein OB-like domain ABBFA_RS01645 PF11104 Type IV pilus assembly protein PilM; ABBFA_RS01650 PF05137 Fimbrial assembly protein (PilN) ABBFA_RS01655 PF04350 Pilus assembly protein, PilO ABBFA_RS01665 PF11741 AMIN domain ABBFA_RS01665 PF00263 Bacterial type II and III secretion system protein ABBFA_RS01665 PF07660 Secretin and TonB N terminus short domain ABBFA_RS01665 PF03958 Bacterial type II/III secretion system short domain ABBFA_RS01670 PF01202 Shikimate kinase ABBFA_RS01675 PF01761 3-dehydroquinate synthase ABBFA_RS01685 PF01493 GXGXG motif ABBFA_RS01685 PF01645 Conserved region in glutamate synthase ABBFA_RS01685 PF00310 Glutamine amidotransferases class-II ABBFA_RS01685 PF04898 Glutamate synthase central domain ABBFA_RS01690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABBFA_RS01690 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS01700 PF04011 LemA family ABBFA_RS01705 PF04536 TPM domain ABBFA_RS01715 PF07963 Prokaryotic N-terminal methylation motif ABBFA_RS01715 PF00114 Pilin (bacterial filament) ABBFA_RS01720 PF15864 Protein glycosylation ligase ABBFA_RS01720 PF04932 O-Antigen ligase ABBFA_RS01720 PF11846 Virulence factor membrane-bound polymerase, C-terminal ABBFA_RS01725 PF00210 Ferritin-like domain ABBFA_RS01730 PF04324 BFD-like [2Fe-2S] binding domain ABBFA_RS01735 PF01042 Endoribonuclease L-PSP ABBFA_RS01740 PF13291 ACT domain ABBFA_RS01740 PF02824 TGS domain ABBFA_RS01740 PF04607 Region found in RelA / SpoT proteins ABBFA_RS01750 PF01192 RNA polymerase Rpb6 ABBFA_RS01755 PF00625 Guanylate kinase ABBFA_RS01760 PF02401 LytB protein ABBFA_RS01800 PF00886 Ribosomal protein S16 ABBFA_RS01805 PF05239 PRC-barrel domain ABBFA_RS01805 PF01782 RimM N-terminal domain ABBFA_RS01810 PF01746 tRNA (Guanine-1)-methyltransferase ABBFA_RS01815 PF01245 Ribosomal protein L19 ABBFA_RS01820 PF00561 alpha/beta hydrolase fold ABBFA_RS01825 PF03280 Proteobacterial lipase chaperone protein ABBFA_RS01830 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABBFA_RS01830 PF09157 Pseudouridine synthase II TruB, C-terminal ABBFA_RS01830 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABBFA_RS01835 PF01925 Sulfite exporter TauE/SafE ABBFA_RS01845 PF00892 EamA-like transporter family ABBFA_RS01850 PF00892 EamA-like transporter family ABBFA_RS01855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABBFA_RS01855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABBFA_RS01860 PF02913 FAD linked oxidases, C-terminal domain ABBFA_RS01860 PF01565 FAD binding domain ABBFA_RS01870 PF03992 Antibiotic biosynthesis monooxygenase ABBFA_RS01875 PF02525 Flavodoxin-like fold ABBFA_RS01885 PF07690 Major Facilitator Superfamily ABBFA_RS01890 PF12805 FUSC-like inner membrane protein yccS ABBFA_RS01895 PF00080 Copper/zinc superoxide dismutase (SODC) ABBFA_RS01900 PF01594 AI-2E family transporter ABBFA_RS01905 PF13614 AAA domain ABBFA_RS01925 PF08241 Methyltransferase domain ABBFA_RS01935 PF00324 Amino acid permease ABBFA_RS01940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABBFA_RS01940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABBFA_RS01945 PF00202 Aminotransferase class-III ABBFA_RS01950 PF04958 Arginine N-succinyltransferase beta subunit ABBFA_RS01955 PF00171 Aldehyde dehydrogenase family ABBFA_RS01960 PF04996 Succinylarginine dihydrolase ABBFA_RS01965 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABBFA_RS01980 PF00082 Subtilase family ABBFA_RS01980 PF05922 Peptidase inhibitor I9 ABBFA_RS01995 PF03466 LysR substrate binding domain ABBFA_RS01995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS02000 PF00892 EamA-like transporter family ABBFA_RS02020 PF05746 DALR anticodon binding domain ABBFA_RS02020 PF02092 Glycyl-tRNA synthetase beta subunit ABBFA_RS02025 PF02091 Glycyl-tRNA synthetase alpha subunit ABBFA_RS02030 PF07690 Major Facilitator Superfamily ABBFA_RS02045 PF00571 CBS domain ABBFA_RS02050 PF04024 PspC domain ABBFA_RS02060 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS02060 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABBFA_RS02060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS02060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS02070 PF01488 Shikimate / quinate 5-dehydrogenase ABBFA_RS02070 PF08501 Shikimate dehydrogenase substrate binding domain ABBFA_RS02070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABBFA_RS02075 PF01218 Coproporphyrinogen III oxidase ABBFA_RS02080 PF00925 GTP cyclohydrolase II ABBFA_RS02085 PF02780 Transketolase, C-terminal domain ABBFA_RS02085 PF02779 Transketolase, pyrimidine binding domain ABBFA_RS02085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABBFA_RS02090 PF00459 Inositol monophosphatase family ABBFA_RS02095 PF00270 DEAD/DEAH box helicase ABBFA_RS02095 PF00271 Helicase conserved C-terminal domain ABBFA_RS02095 PF12343 Cold shock protein DEAD box A ABBFA_RS02095 PF03880 DbpA RNA binding domain ABBFA_RS02105 PF00005 ABC transporter ABBFA_RS02110 PF02405 Permease MlaE ABBFA_RS02120 PF05494 MlaC protein ABBFA_RS02130 PF01544 CorA-like Mg2+ transporter protein ABBFA_RS02135 PF03641 Possible lysine decarboxylase ABBFA_RS02140 PF00293 NUDIX domain ABBFA_RS02145 PF00156 Phosphoribosyl transferase domain ABBFA_RS02150 PF00270 DEAD/DEAH box helicase ABBFA_RS02150 PF00271 Helicase conserved C-terminal domain ABBFA_RS02150 PF17191 RecG wedge domain ABBFA_RS02165 PF01553 Acyltransferase ABBFA_RS02175 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS02185 PF01926 50S ribosome-binding GTPase ABBFA_RS02190 PF02082 Transcriptional regulator ABBFA_RS02195 PF00042 Globin ABBFA_RS02195 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS02195 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS02200 PF05872 Bacterial protein of unknown function (DUF853) ABBFA_RS02205 PF01053 Cys/Met metabolism PLP-dependent enzyme ABBFA_RS02210 PF00117 Glutamine amidotransferase class-I ABBFA_RS02215 PF00338 Ribosomal protein S10p/S20e ABBFA_RS02220 PF00297 Ribosomal protein L3 ABBFA_RS02225 PF00573 Ribosomal protein L4/L1 family ABBFA_RS02230 PF00276 Ribosomal protein L23 ABBFA_RS02235 PF03947 Ribosomal Proteins L2, C-terminal domain ABBFA_RS02235 PF00181 Ribosomal Proteins L2, RNA binding domain ABBFA_RS02240 PF00203 Ribosomal protein S19 ABBFA_RS02245 PF00237 Ribosomal protein L22p/L17e ABBFA_RS02250 PF00189 Ribosomal protein S3, C-terminal domain ABBFA_RS02250 PF07650 KH domain ABBFA_RS02255 PF00252 Ribosomal protein L16p/L10e ABBFA_RS02260 PF00831 Ribosomal L29 protein ABBFA_RS02265 PF00366 Ribosomal protein S17 ABBFA_RS02270 PF00238 Ribosomal protein L14p/L23e ABBFA_RS02275 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABBFA_RS02275 PF00467 KOW motif ABBFA_RS02280 PF00673 ribosomal L5P family C-terminus ABBFA_RS02280 PF00281 Ribosomal protein L5 ABBFA_RS02285 PF00253 Ribosomal protein S14p/S29e ABBFA_RS02290 PF00410 Ribosomal protein S8 ABBFA_RS02295 PF00347 Ribosomal protein L6 ABBFA_RS02300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABBFA_RS02305 PF00333 Ribosomal protein S5, N-terminal domain ABBFA_RS02305 PF03719 Ribosomal protein S5, C-terminal domain ABBFA_RS02310 PF00327 Ribosomal protein L30p/L7e ABBFA_RS02315 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABBFA_RS02320 PF00344 SecY translocase ABBFA_RS02325 PF00444 Ribosomal protein L36 ABBFA_RS02330 PF00416 Ribosomal protein S13/S18 ABBFA_RS02335 PF00411 Ribosomal protein S11 ABBFA_RS02340 PF01479 S4 domain ABBFA_RS02340 PF00163 Ribosomal protein S4/S9 N-terminal domain ABBFA_RS02345 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABBFA_RS02345 PF01000 RNA polymerase Rpb3/RpoA insert domain ABBFA_RS02345 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABBFA_RS02350 PF01196 Ribosomal protein L17 ABBFA_RS02355 PF00743 Flavin-binding monooxygenase-like ABBFA_RS02360 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS02360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS02360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS02365 PF03937 Flavinator of succinate dehydrogenase ABBFA_RS02395 PF09526 Probable metal-binding protein (DUF2387) ABBFA_RS02400 PF01432 Peptidase family M3 ABBFA_RS02405 PF00575 S1 RNA binding domain ABBFA_RS02405 PF17876 Cold shock domain ABBFA_RS02405 PF08461 Ribonuclease R winged-helix domain ABBFA_RS02405 PF08206 Ribonuclease B OB domain ABBFA_RS02405 PF00773 RNB domain ABBFA_RS02450 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABBFA_RS02455 PF12833 Helix-turn-helix domain ABBFA_RS02460 PF00892 EamA-like transporter family ABBFA_RS02465 PF03631 Virulence factor BrkB ABBFA_RS02470 PF03358 NADPH-dependent FMN reductase ABBFA_RS02495 PF02130 Uncharacterized protein family UPF0054 ABBFA_RS02500 PF02562 PhoH-like protein ABBFA_RS02505 PF04055 Radical SAM superfamily ABBFA_RS02505 PF00919 Uncharacterized protein family UPF0004 ABBFA_RS02505 PF01938 TRAM domain ABBFA_RS02510 PF01464 Transglycosylase SLT domain ABBFA_RS02510 PF10145 Phage-related minor tail protein ABBFA_RS02510 PF01551 Peptidase family M23 ABBFA_RS02520 PF00056 lactate/malate dehydrogenase, NAD binding domain ABBFA_RS02520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABBFA_RS02540 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABBFA_RS02545 PF01066 CDP-alcohol phosphatidyltransferase ABBFA_RS02590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS02590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS02590 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS02595 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS02595 PF17932 Tetracyclin repressor-like, C-terminal domain ABBFA_RS02610 PF01039 Carboxyl transferase domain ABBFA_RS02615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS02615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS02615 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS02625 PF02785 Biotin carboxylase C-terminal domain ABBFA_RS02625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABBFA_RS02625 PF00364 Biotin-requiring enzyme ABBFA_RS02625 PF00289 Biotin carboxylase, N-terminal domain ABBFA_RS02635 PF04386 Stringent starvation protein B ABBFA_RS02640 PF00043 Glutathione S-transferase, C-terminal domain ABBFA_RS02640 PF13417 Glutathione S-transferase, N-terminal domain ABBFA_RS02645 PF00380 Ribosomal protein S9/S16 ABBFA_RS02650 PF00572 Ribosomal protein L13 ABBFA_RS02655 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABBFA_RS02660 PF00398 Ribosomal RNA adenine dimethylase ABBFA_RS02665 PF00149 Calcineurin-like phosphoesterase ABBFA_RS02685 PF01926 50S ribosome-binding GTPase ABBFA_RS02685 PF13167 GTP-binding GTPase N-terminal ABBFA_RS02685 PF16360 GTP-binding GTPase Middle Region ABBFA_RS02695 PF13091 PLD-like domain ABBFA_RS02700 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABBFA_RS02700 PF00149 Calcineurin-like phosphoesterase ABBFA_RS02705 PF01389 OmpA-like transmembrane domain ABBFA_RS02705 PF00691 OmpA family ABBFA_RS02710 PF17152 Periplasmic sensor domain ABBFA_RS02710 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS02745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS02745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABBFA_RS02755 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS02755 PF04273 Putative phosphatase (DUF442) ABBFA_RS02760 PF00561 alpha/beta hydrolase fold ABBFA_RS02765 PF00085 Thioredoxin ABBFA_RS02770 PF03061 Thioesterase superfamily ABBFA_RS02780 PF04461 Protein of unknown function (DUF520) ABBFA_RS02790 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABBFA_RS02790 PF01266 FAD dependent oxidoreductase ABBFA_RS02800 PF03795 YCII-related domain ABBFA_RS02805 PF04279 Intracellular septation protein A ABBFA_RS02810 PF02811 PHP domain ABBFA_RS02815 PF01062 Bestrophin, RFP-TM, chloride channel ABBFA_RS02820 PF04002 RadC-like JAB domain ABBFA_RS02825 PF02441 Flavoprotein ABBFA_RS02825 PF04127 DNA / pantothenate metabolism flavoprotein ABBFA_RS02830 PF07549 SecD/SecF GG Motif ABBFA_RS02830 PF02355 Protein export membrane protein ABBFA_RS02835 PF07549 SecD/SecF GG Motif ABBFA_RS02835 PF13721 SecD export protein N-terminal TM region ABBFA_RS02835 PF02355 Protein export membrane protein ABBFA_RS02840 PF02699 Preprotein translocase subunit ABBFA_RS02845 PF01702 Queuine tRNA-ribosyltransferase ABBFA_RS02860 PF02547 Queuosine biosynthesis protein ABBFA_RS02870 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS02870 PF07689 KaiB domain ABBFA_RS02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS02875 PF08335 GlnD PII-uridylyltransferase ABBFA_RS02875 PF03710 Glutamate-ammonia ligase adenylyltransferase ABBFA_RS02880 PF01063 Amino-transferase class IV ABBFA_RS02895 PF01522 Polysaccharide deacetylase ABBFA_RS02900 PF00535 Glycosyl transferase family 2 ABBFA_RS02905 PF00534 Glycosyl transferases group 1 ABBFA_RS02905 PF13439 Glycosyltransferase Family 4 ABBFA_RS02930 PF11380 Stealth protein CR2, conserved region 2 ABBFA_RS02930 PF17102 Stealth protein CR3, conserved region 3 ABBFA_RS02930 PF17101 Stealth protein CR1, conserved region 1 ABBFA_RS02935 PF02938 GAD domain ABBFA_RS02935 PF00152 tRNA synthetases class II (D, K and N) ABBFA_RS02935 PF01336 OB-fold nucleic acid binding domain ABBFA_RS02945 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS02945 PF00593 TonB dependent receptor ABBFA_RS02965 PF06146 Phosphate-starvation-inducible E ABBFA_RS02970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS02970 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS02970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS02970 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABBFA_RS02975 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABBFA_RS02975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS02975 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS02975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS02985 PF00672 HAMP domain ABBFA_RS02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS02985 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS02990 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS02990 PF00072 Response regulator receiver domain ABBFA_RS02995 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABBFA_RS03015 PF01923 Cobalamin adenosyltransferase ABBFA_RS03020 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS03020 PF00593 TonB dependent receptor ABBFA_RS03025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABBFA_RS03030 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS03055 PF00290 Tryptophan synthase alpha chain ABBFA_RS03060 PF01039 Carboxyl transferase domain ABBFA_RS03065 PF08245 Mur ligase middle domain ABBFA_RS03065 PF02875 Mur ligase family, glutamate ligase domain ABBFA_RS03080 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS03085 PF00578 AhpC/TSA family ABBFA_RS03085 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABBFA_RS03090 PF01043 SecA preprotein cross-linking domain ABBFA_RS03090 PF02810 SEC-C motif ABBFA_RS03090 PF07516 SecA Wing and Scaffold domain ABBFA_RS03090 PF07517 SecA DEAD-like domain ABBFA_RS03100 PF00083 Sugar (and other) transporter ABBFA_RS03100 PF07690 Major Facilitator Superfamily ABBFA_RS03105 PF03006 Haemolysin-III related ABBFA_RS03115 PF13673 Acetyltransferase (GNAT) domain ABBFA_RS03130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABBFA_RS03130 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS03130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABBFA_RS03135 PF02803 Thiolase, C-terminal domain ABBFA_RS03135 PF00108 Thiolase, N-terminal domain ABBFA_RS03140 PF12833 Helix-turn-helix domain ABBFA_RS03140 PF02311 AraC-like ligand binding domain ABBFA_RS03145 PF02515 CoA-transferase family III ABBFA_RS03150 PF04966 Carbohydrate-selective porin, OprB family ABBFA_RS03155 PF01011 PQQ enzyme repeat ABBFA_RS03160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABBFA_RS03160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABBFA_RS03170 PF00893 Small Multidrug Resistance protein ABBFA_RS03180 PF00108 Thiolase, N-terminal domain ABBFA_RS03180 PF02803 Thiolase, C-terminal domain ABBFA_RS03190 PF00691 OmpA family ABBFA_RS03190 PF13505 Outer membrane protein beta-barrel domain ABBFA_RS03195 PF01139 tRNA-splicing ligase RtcB ABBFA_RS03200 PF00324 Amino acid permease ABBFA_RS03205 PF05175 Methyltransferase small domain ABBFA_RS03205 PF08468 Methyltransferase small domain N-terminal ABBFA_RS03210 PF00860 Permease family ABBFA_RS03215 PF00679 Elongation factor G C-terminus ABBFA_RS03215 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS03215 PF03144 Elongation factor Tu domain 2 ABBFA_RS03220 PF01741 Large-conductance mechanosensitive channel, MscL ABBFA_RS03235 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABBFA_RS03235 PF06827 Zinc finger found in FPG and IleRS ABBFA_RS03235 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABBFA_RS03240 PF02245 Methylpurine-DNA glycosylase (MPG) ABBFA_RS03245 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS03245 PF00593 TonB dependent receptor ABBFA_RS03250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABBFA_RS03255 PF03547 Membrane transport protein ABBFA_RS03265 PF13098 Thioredoxin-like domain ABBFA_RS03265 PF10411 Disulfide bond isomerase protein N-terminus ABBFA_RS03270 PF01571 Aminomethyltransferase folate-binding domain ABBFA_RS03280 PF04343 Protein of unknown function, DUF488 ABBFA_RS03285 PF03831 PhnA domain ABBFA_RS03285 PF08274 PhnA Zinc-Ribbon ABBFA_RS03290 PF07411 Domain of unknown function (DUF1508) ABBFA_RS03295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABBFA_RS03295 PF03129 Anticodon binding domain ABBFA_RS03295 PF04073 Aminoacyl-tRNA editing domain ABBFA_RS03300 PF00873 AcrB/AcrD/AcrF family ABBFA_RS03315 PF00072 Response regulator receiver domain ABBFA_RS03320 PF00072 Response regulator receiver domain ABBFA_RS03325 PF01584 CheW-like domain ABBFA_RS03330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABBFA_RS03330 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABBFA_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS03335 PF01627 Hpt domain ABBFA_RS03335 PF00072 Response regulator receiver domain ABBFA_RS03335 PF01584 CheW-like domain ABBFA_RS03345 PF06969 HemN C-terminal domain ABBFA_RS03345 PF04055 Radical SAM superfamily ABBFA_RS03355 PF07687 Peptidase dimerisation domain ABBFA_RS03355 PF01546 Peptidase family M20/M25/M40 ABBFA_RS03360 PF08085 Entericidin EcnA/B family ABBFA_RS03370 PF04304 Protein of unknown function (DUF454) ABBFA_RS03375 PF03734 L,D-transpeptidase catalytic domain ABBFA_RS03375 PF17969 L,D-transpeptidase C-terminal domain ABBFA_RS03415 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS03415 PF00258 Flavodoxin ABBFA_RS03415 PF00667 FAD binding domain ABBFA_RS03425 PF12805 FUSC-like inner membrane protein yccS ABBFA_RS03430 PF07690 Major Facilitator Superfamily ABBFA_RS03435 PF00881 Nitroreductase family ABBFA_RS03450 PF01235 Sodium:alanine symporter family ABBFA_RS03455 PF01734 Patatin-like phospholipase ABBFA_RS03460 PF13291 ACT domain ABBFA_RS03460 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS03465 PF05992 SbmA/BacA-like family ABBFA_RS03490 PF02637 GatB domain ABBFA_RS03490 PF02934 GatB/GatE catalytic domain ABBFA_RS03495 PF01425 Amidase ABBFA_RS03500 PF02686 Glu-tRNAGln amidotransferase C subunit ABBFA_RS03510 PF04085 rod shape-determining protein MreC ABBFA_RS03515 PF04093 rod shape-determining protein MreD ABBFA_RS03520 PF02545 Maf-like protein ABBFA_RS03525 PF10150 Ribonuclease E/G family ABBFA_RS03525 PF00575 S1 RNA binding domain ABBFA_RS03535 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABBFA_RS03535 PF06974 Protein of unknown function (DUF1298) ABBFA_RS03540 PF01507 Phosphoadenosine phosphosulfate reductase family ABBFA_RS03555 PF02525 Flavodoxin-like fold ABBFA_RS03575 PF02673 Bacitracin resistance protein BacA ABBFA_RS03580 PF12833 Helix-turn-helix domain ABBFA_RS03580 PF06719 AraC-type transcriptional regulator N-terminus ABBFA_RS03585 PF00550 Phosphopantetheine attachment site ABBFA_RS03585 PF08659 KR domain ABBFA_RS03585 PF16197 Ketoacyl-synthetase C-terminal extension ABBFA_RS03585 PF09277 Erythronolide synthase, docking ABBFA_RS03585 PF08990 Erythronolide synthase docking ABBFA_RS03585 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS03585 PF00698 Acyl transferase domain ABBFA_RS03585 PF02801 Beta-ketoacyl synthase, C-terminal domain ABBFA_RS03585 PF00109 Beta-ketoacyl synthase, N-terminal domain ABBFA_RS03585 PF14765 Polyketide synthase dehydratase ABBFA_RS03590 PF01965 DJ-1/PfpI family ABBFA_RS03600 PF00324 Amino acid permease ABBFA_RS03605 PF04303 PrpF protein ABBFA_RS03610 PF00348 Polyprenyl synthetase ABBFA_RS03615 PF04237 YjbR ABBFA_RS03620 PF01145 SPFH domain / Band 7 family ABBFA_RS03630 PF01734 Patatin-like phospholipase ABBFA_RS03650 PF00884 Sulfatase ABBFA_RS03650 PF08019 Phosphoethanolamine transferase EptA/EptB ABBFA_RS03655 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS03655 PF00072 Response regulator receiver domain ABBFA_RS03660 PF08521 Two-component sensor kinase N-terminal ABBFA_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS03660 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS03670 PF00909 Ammonium Transporter Family ABBFA_RS03680 PF03466 LysR substrate binding domain ABBFA_RS03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS03700 PF10458 Valyl tRNA synthetase tRNA binding arm ABBFA_RS03700 PF08264 Anticodon-binding domain of tRNA ABBFA_RS03700 PF00133 tRNA synthetases class I (I, L, M and V) ABBFA_RS03720 PF01906 Putative heavy-metal-binding ABBFA_RS03725 PF01906 Putative heavy-metal-binding ABBFA_RS03730 PF02321 Outer membrane efflux protein ABBFA_RS03735 PF00873 AcrB/AcrD/AcrF family ABBFA_RS03740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABBFA_RS03740 PF00529 HlyD membrane-fusion protein of T1SS ABBFA_RS03745 PF01569 PAP2 superfamily ABBFA_RS03755 PF00348 Polyprenyl synthetase ABBFA_RS03765 PF00829 Ribosomal prokaryotic L21 protein ABBFA_RS03770 PF01016 Ribosomal L27 protein ABBFA_RS03775 PF03548 Outer membrane lipoprotein carrier protein LolA ABBFA_RS03785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABBFA_RS03785 PF02403 Seryl-tRNA synthetase N-terminal domain ABBFA_RS03790 PF10414 Sirohaem synthase dimerisation region ABBFA_RS03790 PF14824 Sirohaem biosynthesis protein central ABBFA_RS03790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABBFA_RS03795 PF00588 SpoU rRNA Methylase family ABBFA_RS03800 PF01638 HxlR-like helix-turn-helix ABBFA_RS03805 PF03358 NADPH-dependent FMN reductase ABBFA_RS03810 PF13520 Amino acid permease ABBFA_RS03815 PF00465 Iron-containing alcohol dehydrogenase ABBFA_RS03825 PF03099 Biotin/lipoate A/B protein ligase family ABBFA_RS03830 PF04359 Protein of unknown function (DUF493) ABBFA_RS03835 PF00140 Sigma-70 factor, region 1.2 ABBFA_RS03835 PF04542 Sigma-70 region 2 ABBFA_RS03835 PF04539 Sigma-70 region 3 ABBFA_RS03835 PF04546 Sigma-70, non-essential region ABBFA_RS03835 PF03979 Sigma-70 factor, region 1.1 ABBFA_RS03835 PF04545 Sigma-70, region 4 ABBFA_RS03850 PF17773 UPF0176 acylphosphatase like domain ABBFA_RS03850 PF00581 Rhodanese-like domain ABBFA_RS03860 PF00285 Citrate synthase, C-terminal domain ABBFA_RS03865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABBFA_RS03870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABBFA_RS03875 PF02910 Fumarate reductase flavoprotein C-term ABBFA_RS03875 PF00890 FAD binding domain ABBFA_RS03880 PF13085 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS03895 PF16078 2-oxoglutarate dehydrogenase N-terminus ABBFA_RS03895 PF00676 Dehydrogenase E1 component ABBFA_RS03895 PF16870 2-oxoglutarate dehydrogenase C-terminal ABBFA_RS03895 PF02779 Transketolase, pyrimidine binding domain ABBFA_RS03900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABBFA_RS03900 PF00364 Biotin-requiring enzyme ABBFA_RS03900 PF02817 e3 binding domain ABBFA_RS03905 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS03905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABBFA_RS03910 PF08442 ATP-grasp domain ABBFA_RS03910 PF00549 CoA-ligase ABBFA_RS03915 PF02629 CoA binding domain ABBFA_RS03915 PF00549 CoA-ligase ABBFA_RS03935 PF00579 tRNA synthetases class I (W and Y) ABBFA_RS03940 PF05661 Protein of unknown function (DUF808) ABBFA_RS03945 PF04228 Putative neutral zinc metallopeptidase ABBFA_RS03950 PF00999 Sodium/hydrogen exchanger family ABBFA_RS03965 PF09587 Bacterial capsule synthesis protein PGA_cap ABBFA_RS03975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABBFA_RS03980 PF00582 Universal stress protein family ABBFA_RS03985 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS03990 PF01272 Transcription elongation factor, GreA/GreB, C-term ABBFA_RS03990 PF03449 Transcription elongation factor, N-terminal ABBFA_RS03995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABBFA_RS03995 PF02142 MGS-like domain ABBFA_RS03995 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABBFA_RS04000 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABBFA_RS04000 PF00117 Glutamine amidotransferase class-I ABBFA_RS04015 PF01985 CRS1 / YhbY (CRM) domain ABBFA_RS04020 PF01728 FtsJ-like methyltransferase ABBFA_RS04025 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS04025 PF17862 AAA+ lid domain ABBFA_RS04025 PF06480 FtsH Extracellular ABBFA_RS04025 PF01434 Peptidase family M41 ABBFA_RS04030 PF00809 Pterin binding enzyme ABBFA_RS04050 PF09423 PhoD-like phosphatase ABBFA_RS04050 PF16655 PhoD-like phosphatase, N-terminal domain ABBFA_RS04065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABBFA_RS04065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABBFA_RS04080 PF00083 Sugar (and other) transporter ABBFA_RS04085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABBFA_RS04085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABBFA_RS04090 PF01266 FAD dependent oxidoreductase ABBFA_RS04090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABBFA_RS04095 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABBFA_RS04095 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABBFA_RS04100 PF00781 Diacylglycerol kinase catalytic domain ABBFA_RS04105 PF00149 Calcineurin-like phosphoesterase ABBFA_RS04115 PF00166 Chaperonin 10 Kd subunit ABBFA_RS04120 PF00118 TCP-1/cpn60 chaperonin family ABBFA_RS04125 PF01219 Prokaryotic diacylglycerol kinase ABBFA_RS04130 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS04135 PF03009 Glycerophosphoryl diester phosphodiesterase family ABBFA_RS04140 PF00873 AcrB/AcrD/AcrF family ABBFA_RS04150 PF01435 Peptidase family M48 ABBFA_RS04155 PF01464 Transglycosylase SLT domain ABBFA_RS04165 PF01171 PP-loop family ABBFA_RS04175 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABBFA_RS04175 PF01464 Transglycosylase SLT domain ABBFA_RS04180 PF01272 Transcription elongation factor, GreA/GreB, C-term ABBFA_RS04180 PF03449 Transcription elongation factor, N-terminal ABBFA_RS04195 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS04195 PF00668 Condensation domain ABBFA_RS04195 PF00975 Thioesterase domain ABBFA_RS04195 PF00501 AMP-binding enzyme ABBFA_RS04195 PF00550 Phosphopantetheine attachment site ABBFA_RS04235 PF00881 Nitroreductase family ABBFA_RS04250 PF02595 Glycerate kinase family ABBFA_RS04255 PF00384 Molybdopterin oxidoreductase ABBFA_RS04260 PF02634 FdhD/NarQ family ABBFA_RS04265 PF06803 Protein of unknown function (DUF1232) ABBFA_RS04270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABBFA_RS04270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABBFA_RS04270 PF11890 Domain of unknown function (DUF3410) ABBFA_RS04275 PF00152 tRNA synthetases class II (D, K and N) ABBFA_RS04285 PF18073 Rubredoxin metal binding domain ABBFA_RS04290 PF00324 Amino acid permease ABBFA_RS04300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABBFA_RS04300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABBFA_RS04305 PF01678 Diaminopimelate epimerase ABBFA_RS04310 PF00561 alpha/beta hydrolase fold ABBFA_RS04315 PF01810 LysE type translocator ABBFA_RS04320 PF00589 Phage integrase family ABBFA_RS04320 PF02899 Phage integrase, N-terminal SAM-like domain ABBFA_RS04325 PF01012 Electron transfer flavoprotein domain ABBFA_RS04330 PF01012 Electron transfer flavoprotein domain ABBFA_RS04330 PF00766 Electron transfer flavoprotein FAD-binding domain ABBFA_RS04335 PF00521 DNA gyrase/topoisomerase IV, subunit A ABBFA_RS04335 PF03989 DNA gyrase C-terminal domain, beta-propeller ABBFA_RS04350 PF00535 Glycosyl transferase family 2 ABBFA_RS04370 PF13533 Biotin-lipoyl like ABBFA_RS04380 PF00266 Aminotransferase class-V ABBFA_RS04390 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABBFA_RS04400 PF02687 FtsX-like permease family ABBFA_RS04400 PF12704 MacB-like periplasmic core domain ABBFA_RS04405 PF00005 ABC transporter ABBFA_RS04410 PF03772 Competence protein ABBFA_RS04410 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS04410 PF13567 Domain of unknown function (DUF4131) ABBFA_RS04420 PF06965 Na+/H+ antiporter 1 ABBFA_RS04420 PF01343 Peptidase family S49 ABBFA_RS04425 PF12697 Alpha/beta hydrolase family ABBFA_RS04430 PF00551 Formyl transferase ABBFA_RS04435 PF02769 AIR synthase related protein, C-terminal domain ABBFA_RS04435 PF00586 AIR synthase related protein, N-terminal domain ABBFA_RS04440 PF01594 AI-2E family transporter ABBFA_RS04445 PF11638 DnaA N-terminal domain ABBFA_RS04445 PF08299 Bacterial dnaA protein helix-turn-helix ABBFA_RS04445 PF00308 Bacterial dnaA protein ABBFA_RS04475 PF00588 SpoU rRNA Methylase family ABBFA_RS04475 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABBFA_RS04480 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABBFA_RS04490 PF00691 OmpA family ABBFA_RS04495 PF07676 WD40-like Beta Propeller Repeat ABBFA_RS04495 PF04052 TolB amino-terminal domain ABBFA_RS04505 PF02472 Biopolymer transport protein ExbD/TolR ABBFA_RS04510 PF01618 MotA/TolQ/ExbB proton channel family ABBFA_RS04515 PF03061 Thioesterase superfamily ABBFA_RS04520 PF07687 Peptidase dimerisation domain ABBFA_RS04520 PF01546 Peptidase family M20/M25/M40 ABBFA_RS04525 PF17864 RuvB AAA lid domain ABBFA_RS04525 PF05491 RuvB C-terminal winged helix domain ABBFA_RS04525 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABBFA_RS04530 PF07499 RuvA, C-terminal domain ABBFA_RS04530 PF01330 RuvA N terminal domain ABBFA_RS04535 PF01966 HD domain ABBFA_RS04540 PF02769 AIR synthase related protein, C-terminal domain ABBFA_RS04540 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABBFA_RS04540 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABBFA_RS04545 PF07690 Major Facilitator Superfamily ABBFA_RS04550 PF01784 NIF3 (NGG1p interacting factor 3) ABBFA_RS04555 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS04560 PF01467 Cytidylyltransferase-like ABBFA_RS04560 PF00293 NUDIX domain ABBFA_RS04570 PF00578 AhpC/TSA family ABBFA_RS04585 PF06508 Queuosine biosynthesis protein QueC ABBFA_RS04595 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS04595 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABBFA_RS04595 PF14602 Hexapeptide repeat of succinyl-transferase ABBFA_RS04605 PF03466 LysR substrate binding domain ABBFA_RS04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS04610 PF00005 ABC transporter ABBFA_RS04610 PF12857 TOBE-like domain ABBFA_RS04615 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS04635 PF01063 Amino-transferase class IV ABBFA_RS04640 PF02618 YceG-like family ABBFA_RS04645 PF02223 Thymidylate kinase ABBFA_RS04655 PF00890 FAD binding domain ABBFA_RS04655 PF02910 Fumarate reductase flavoprotein C-term ABBFA_RS04660 PF13180 PDZ domain ABBFA_RS04670 PF00679 Elongation factor G C-terminus ABBFA_RS04670 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS04670 PF03144 Elongation factor Tu domain 2 ABBFA_RS04670 PF06421 GTP-binding protein LepA C-terminus ABBFA_RS04675 PF10502 Signal peptidase, peptidase S26 ABBFA_RS04685 PF00035 Double-stranded RNA binding motif ABBFA_RS04685 PF14622 Ribonuclease-III-like ABBFA_RS04690 PF07650 KH domain ABBFA_RS04690 PF01926 50S ribosome-binding GTPase ABBFA_RS04700 PF11967 Recombination protein O N terminal ABBFA_RS04700 PF02565 Recombination protein O C terminal ABBFA_RS04705 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABBFA_RS04710 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABBFA_RS04715 PF00106 short chain dehydrogenase ABBFA_RS04745 PF00155 Aminotransferase class I and II ABBFA_RS04755 PF17151 Periplasmic sensor domain ABBFA_RS04755 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS04765 PF12344 Ultra-violet resistance protein B ABBFA_RS04765 PF04851 Type III restriction enzyme, res subunit ABBFA_RS04765 PF02151 UvrB/uvrC motif ABBFA_RS04765 PF17757 UvrB interaction domain ABBFA_RS04765 PF00271 Helicase conserved C-terminal domain ABBFA_RS04775 PF00892 EamA-like transporter family ABBFA_RS04780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABBFA_RS04780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABBFA_RS04795 PF01018 GTP1/OBG ABBFA_RS04795 PF01926 50S ribosome-binding GTPase ABBFA_RS04800 PF01472 PUA domain ABBFA_RS04800 PF00696 Amino acid kinase family ABBFA_RS04810 PF07759 Protein of unknown function (DUF1615) ABBFA_RS04815 PF01207 Dihydrouridine synthase (Dus) ABBFA_RS04820 PF03060 Nitronate monooxygenase ABBFA_RS04835 PF02350 UDP-N-acetylglucosamine 2-epimerase ABBFA_RS04865 PF00875 DNA photolyase ABBFA_RS04865 PF03441 FAD binding domain of DNA photolyase ABBFA_RS04870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABBFA_RS04875 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS04880 PF07943 Penicillin-binding protein 5, C-terminal domain ABBFA_RS04880 PF00768 D-alanyl-D-alanine carboxypeptidase ABBFA_RS04890 PF03971 Monomeric isocitrate dehydrogenase ABBFA_RS04895 PF00849 RNA pseudouridylate synthase ABBFA_RS04900 PF00180 Isocitrate/isopropylmalate dehydrogenase ABBFA_RS04920 PF06779 Uncharacterised MFS-type transporter YbfB ABBFA_RS04925 PF03466 LysR substrate binding domain ABBFA_RS04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS04930 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS04935 PF02567 Phenazine biosynthesis-like protein ABBFA_RS04940 PF05193 Peptidase M16 inactive domain ABBFA_RS04940 PF00675 Insulinase (Peptidase family M16) ABBFA_RS04965 PF01867 CRISPR associated protein Cas1 ABBFA_RS04975 PF09611 CRISPR-associated protein (Cas_Csy1) ABBFA_RS04980 PF09614 CRISPR-associated protein (Cas_Csy2) ABBFA_RS04985 PF09615 CRISPR-associated protein (Cas_Csy3) ABBFA_RS04995 PF02581 Thiamine monophosphate synthase ABBFA_RS05000 PF00202 Aminotransferase class-III ABBFA_RS05010 PF00849 RNA pseudouridylate synthase ABBFA_RS05015 PF00271 Helicase conserved C-terminal domain ABBFA_RS05015 PF18337 RapA N-terminal Tudor like domain ABBFA_RS05015 PF00176 SNF2 family N-terminal domain ABBFA_RS05015 PF18339 RapA N-terminal Tudor like domain 1 ABBFA_RS05015 PF12137 RNA polymerase recycling family C-terminal ABBFA_RS05025 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS05030 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS05030 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS05030 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS05035 PF00487 Fatty acid desaturase ABBFA_RS05045 PF17754 MftR C-terminal domain ABBFA_RS05045 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS05055 PF00202 Aminotransferase class-III ABBFA_RS05060 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABBFA_RS05065 PF00171 Aldehyde dehydrogenase family ABBFA_RS05070 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS05075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABBFA_RS05075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABBFA_RS05075 PF00205 Thiamine pyrophosphate enzyme, central domain ABBFA_RS05080 PF00324 Amino acid permease ABBFA_RS05085 PF12849 PBP superfamily domain ABBFA_RS05090 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS05100 PF00005 ABC transporter ABBFA_RS05105 PF08496 Peptidase family S49 N-terminal ABBFA_RS05105 PF01343 Peptidase family S49 ABBFA_RS05120 PF00206 Lyase ABBFA_RS05120 PF08328 Adenylosuccinate lyase C-terminal ABBFA_RS05125 PF04356 Protein of unknown function (DUF489) ABBFA_RS05135 PF00293 NUDIX domain ABBFA_RS05135 PF13344 Haloacid dehalogenase-like hydrolase ABBFA_RS05140 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS05145 PF07943 Penicillin-binding protein 5, C-terminal domain ABBFA_RS05145 PF00768 D-alanyl-D-alanine carboxypeptidase ABBFA_RS05160 PF01975 Survival protein SurE ABBFA_RS05165 PF01476 LysM domain ABBFA_RS05165 PF01551 Peptidase family M23 ABBFA_RS05170 PF03466 LysR substrate binding domain ABBFA_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS05175 PF13654 AAA domain ABBFA_RS05175 PF05362 Lon protease (S16) C-terminal proteolytic domain ABBFA_RS05180 PF07690 Major Facilitator Superfamily ABBFA_RS05185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABBFA_RS05190 PF13593 SBF-like CPA transporter family (DUF4137) ABBFA_RS05195 PF01197 Ribosomal protein L31 ABBFA_RS05200 PF12792 CSS motif domain associated with EAL ABBFA_RS05200 PF00563 EAL domain ABBFA_RS05210 PF04055 Radical SAM superfamily ABBFA_RS05215 PF01132 Elongation factor P (EF-P) OB domain ABBFA_RS05215 PF09285 Elongation factor P, C-terminal ABBFA_RS05215 PF08207 Elongation factor P (EF-P) KOW-like domain ABBFA_RS05220 PF02554 Carbon starvation protein CstA ABBFA_RS05220 PF13722 5TM C-terminal transporter carbon starvation CstA ABBFA_RS05225 PF04328 Selenoprotein, putative ABBFA_RS05275 PF17954 Quercetinase C-terminal cupin domain ABBFA_RS05275 PF02678 Pirin ABBFA_RS05280 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS05285 PF08348 YheO-like PAS domain ABBFA_RS05285 PF13309 HTH domain ABBFA_RS05295 PF00668 Condensation domain ABBFA_RS05295 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS05295 PF00501 AMP-binding enzyme ABBFA_RS05295 PF00550 Phosphopantetheine attachment site ABBFA_RS05300 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS05300 PF00668 Condensation domain ABBFA_RS05300 PF00501 AMP-binding enzyme ABBFA_RS05300 PF00550 Phosphopantetheine attachment site ABBFA_RS05300 PF00975 Thioesterase domain ABBFA_RS05305 PF01032 FecCD transport family ABBFA_RS05310 PF01032 FecCD transport family ABBFA_RS05315 PF00005 ABC transporter ABBFA_RS05320 PF01497 Periplasmic binding protein ABBFA_RS05325 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS05325 PF00593 TonB dependent receptor ABBFA_RS05330 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABBFA_RS05335 PF00501 AMP-binding enzyme ABBFA_RS05335 PF00550 Phosphopantetheine attachment site ABBFA_RS05335 PF00668 Condensation domain ABBFA_RS05340 PF00501 AMP-binding enzyme ABBFA_RS05340 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS05345 PF00550 Phosphopantetheine attachment site ABBFA_RS05345 PF00857 Isochorismatase family ABBFA_RS05350 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABBFA_RS05360 PF00005 ABC transporter ABBFA_RS05360 PF00664 ABC transporter transmembrane region ABBFA_RS05365 PF00005 ABC transporter ABBFA_RS05370 PF00975 Thioesterase domain ABBFA_RS05380 PF00425 chorismate binding enzyme ABBFA_RS05390 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABBFA_RS05395 PF05675 Protein of unknown function (DUF817) ABBFA_RS05410 PF00144 Beta-lactamase ABBFA_RS05415 PF01227 GTP cyclohydrolase I ABBFA_RS05420 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS05420 PF01799 [2Fe-2S] binding domain ABBFA_RS05425 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABBFA_RS05425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABBFA_RS05440 PF00218 Indole-3-glycerol phosphate synthase ABBFA_RS05445 PF02885 Glycosyl transferase family, helical bundle domain ABBFA_RS05445 PF00591 Glycosyl transferase family, a/b domain ABBFA_RS05450 PF00593 TonB dependent receptor ABBFA_RS05450 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS05455 PF11838 ERAP1-like C-terminal domain ABBFA_RS05455 PF01433 Peptidase family M1 domain ABBFA_RS05460 PF00117 Glutamine amidotransferase class-I ABBFA_RS05470 PF00854 POT family ABBFA_RS05475 PF00120 Glutamine synthetase, catalytic domain ABBFA_RS05475 PF03951 Glutamine synthetase, beta-Grasp domain ABBFA_RS05480 PF04345 Chorismate lyase ABBFA_RS05485 PF01040 UbiA prenyltransferase family ABBFA_RS05520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABBFA_RS05520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABBFA_RS05525 PF01784 NIF3 (NGG1p interacting factor 3) ABBFA_RS05530 PF13180 PDZ domain ABBFA_RS05535 PF12627 Probable RNA and SrmB- binding site of polymerase A ABBFA_RS05535 PF01743 Poly A polymerase head domain ABBFA_RS05540 PF01515 Phosphate acetyl/butaryl transferase ABBFA_RS05540 PF03949 Malic enzyme, NAD binding domain ABBFA_RS05540 PF00390 Malic enzyme, N-terminal domain ABBFA_RS05545 PF00563 EAL domain ABBFA_RS05545 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS05545 PF03707 Bacterial signalling protein N terminal repeat ABBFA_RS05550 PF04452 RNA methyltransferase ABBFA_RS05555 PF02219 Methylenetetrahydrofolate reductase ABBFA_RS05560 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABBFA_RS05560 PF05221 S-adenosyl-L-homocysteine hydrolase ABBFA_RS05575 PF09317 Domain of unknown function (DUF1974) ABBFA_RS05575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS05575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS05580 PF04055 Radical SAM superfamily ABBFA_RS05585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABBFA_RS05585 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS05595 PF07690 Major Facilitator Superfamily ABBFA_RS05605 PF00557 Metallopeptidase family M24 ABBFA_RS05610 PF00318 Ribosomal protein S2 ABBFA_RS05615 PF00889 Elongation factor TS ABBFA_RS05625 PF12833 Helix-turn-helix domain ABBFA_RS05645 PF05036 Sporulation related domain ABBFA_RS05645 PF03330 Lytic transglycolase ABBFA_RS05650 PF13406 Transglycosylase SLT domain ABBFA_RS05655 PF01098 Cell cycle protein ABBFA_RS05665 PF14489 QueF-like protein ABBFA_RS05665 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABBFA_RS05670 PF01061 ABC-2 type transporter ABBFA_RS05675 PF00005 ABC transporter ABBFA_RS05705 PF00464 Serine hydroxymethyltransferase ABBFA_RS05710 PF02321 Outer membrane efflux protein ABBFA_RS05715 PF00873 AcrB/AcrD/AcrF family ABBFA_RS05720 PF13533 Biotin-lipoyl like ABBFA_RS05725 PF03466 LysR substrate binding domain ABBFA_RS05725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS05730 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABBFA_RS05735 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS05740 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS05745 PF00005 ABC transporter ABBFA_RS05750 PF00893 Small Multidrug Resistance protein ABBFA_RS05755 PF00037 4Fe-4S binding domain ABBFA_RS05760 PF01136 Peptidase family U32 ABBFA_RS05760 PF16325 Peptidase family U32 C-terminal domain ABBFA_RS05765 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS05765 PF00155 Aminotransferase class I and II ABBFA_RS05770 PF02567 Phenazine biosynthesis-like protein ABBFA_RS05775 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS05775 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS05780 PF18389 TrmO C-terminal domain ABBFA_RS05780 PF01980 tRNA-methyltransferase O ABBFA_RS05790 PF00437 Type II/IV secretion system protein ABBFA_RS05790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABBFA_RS05800 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS05800 PF00072 Response regulator receiver domain ABBFA_RS05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS05805 PF08521 Two-component sensor kinase N-terminal ABBFA_RS05805 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS05815 PF00293 NUDIX domain ABBFA_RS05825 PF00905 Penicillin binding protein transpeptidase domain ABBFA_RS05825 PF00912 Transglycosylase ABBFA_RS05825 PF14814 Bifunctional transglycosylase second domain ABBFA_RS05830 PF01513 ATP-NAD kinase ABBFA_RS05835 PF07023 Protein of unknown function (DUF1315) ABBFA_RS05840 PF02885 Glycosyl transferase family, helical bundle domain ABBFA_RS05840 PF00591 Glycosyl transferase family, a/b domain ABBFA_RS05850 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS05855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS05855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS05855 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS05860 PF00756 Putative esterase ABBFA_RS05865 PF01842 ACT domain ABBFA_RS05865 PF00800 Prephenate dehydratase ABBFA_RS05865 PF01817 Chorismate mutase type II ABBFA_RS05870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABBFA_RS05880 PF07687 Peptidase dimerisation domain ABBFA_RS05880 PF01546 Peptidase family M20/M25/M40 ABBFA_RS05885 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS05895 PF03883 Peroxide stress protein YaaA ABBFA_RS05900 PF05690 Thiazole biosynthesis protein ThiG ABBFA_RS05910 PF04241 Protein of unknown function (DUF423) ABBFA_RS05915 PF04542 Sigma-70 region 2 ABBFA_RS05915 PF04545 Sigma-70, region 4 ABBFA_RS05915 PF00140 Sigma-70 factor, region 1.2 ABBFA_RS05925 PF00313 'Cold-shock' DNA-binding domain ABBFA_RS05930 PF00271 Helicase conserved C-terminal domain ABBFA_RS05930 PF00270 DEAD/DEAH box helicase ABBFA_RS05940 PF00881 Nitroreductase family ABBFA_RS05945 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABBFA_RS05945 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABBFA_RS05965 PF01180 Dihydroorotate dehydrogenase ABBFA_RS05970 PF02674 Colicin V production protein ABBFA_RS05975 PF00156 Phosphoribosyl transferase domain ABBFA_RS05990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABBFA_RS05990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABBFA_RS05995 PF01435 Peptidase family M48 ABBFA_RS06000 PF09424 Yqey-like protein ABBFA_RS06005 PF01165 Ribosomal protein S21 ABBFA_RS06010 PF00814 Glycoprotease family ABBFA_RS06030 PF00069 Protein kinase domain ABBFA_RS06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS06055 PF03466 LysR substrate binding domain ABBFA_RS06060 PF00202 Aminotransferase class-III ABBFA_RS06065 PF00171 Aldehyde dehydrogenase family ABBFA_RS06070 PF00324 Amino acid permease ABBFA_RS06100 PF04076 Bacterial OB fold (BOF) protein ABBFA_RS06125 PF00561 alpha/beta hydrolase fold ABBFA_RS06130 PF03616 Sodium/glutamate symporter ABBFA_RS06140 PF03466 LysR substrate binding domain ABBFA_RS06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS06145 PF00248 Aldo/keto reductase family ABBFA_RS06150 PF00106 short chain dehydrogenase ABBFA_RS06165 PF07729 FCD domain ABBFA_RS06165 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS06225 PF00083 Sugar (and other) transporter ABBFA_RS06225 PF08946 Osmosensory transporter coiled coil ABBFA_RS06250 PF04403 Paraquat-inducible protein A ABBFA_RS06255 PF02470 MlaD protein ABBFA_RS06265 PF00576 HIUase/Transthyretin family ABBFA_RS06275 PF00072 Response regulator receiver domain ABBFA_RS06275 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS06280 PF00672 HAMP domain ABBFA_RS06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS06280 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS06320 PF08521 Two-component sensor kinase N-terminal ABBFA_RS06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS06320 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS06325 PF00072 Response regulator receiver domain ABBFA_RS06325 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS06345 PF01177 Asp/Glu/Hydantoin racemase ABBFA_RS06350 PF00892 EamA-like transporter family ABBFA_RS06355 PF07995 Glucose / Sorbosone dehydrogenase ABBFA_RS06375 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS06385 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS06385 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABBFA_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS06395 PF09383 NIL domain ABBFA_RS06395 PF00005 ABC transporter ABBFA_RS06400 PF03180 NLPA lipoprotein ABBFA_RS06405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABBFA_RS06405 PF02843 Phosphoribosylglycinamide synthetase, C domain ABBFA_RS06405 PF02844 Phosphoribosylglycinamide synthetase, N domain ABBFA_RS06410 PF02142 MGS-like domain ABBFA_RS06410 PF01808 AICARFT/IMPCHase bienzyme ABBFA_RS06415 PF02954 Bacterial regulatory protein, Fis family ABBFA_RS06435 PF01134 Glucose inhibited division protein A ABBFA_RS06435 PF13932 GidA associated domain ABBFA_RS06445 PF14403 Circularly permuted ATP-grasp type 2 ABBFA_RS06455 PF08379 Bacterial transglutaminase-like N-terminal region ABBFA_RS06455 PF01841 Transglutaminase-like superfamily ABBFA_RS06465 PF00842 Alanine racemase, C-terminal domain ABBFA_RS06465 PF01168 Alanine racemase, N-terminal domain ABBFA_RS06470 PF03796 DnaB-like helicase C terminal domain ABBFA_RS06470 PF00772 DnaB-like helicase N terminal domain ABBFA_RS06475 PF01281 Ribosomal protein L9, N-terminal domain ABBFA_RS06475 PF03948 Ribosomal protein L9, C-terminal domain ABBFA_RS06480 PF01084 Ribosomal protein S18 ABBFA_RS06485 PF01250 Ribosomal protein S6 ABBFA_RS06490 PF01040 UbiA prenyltransferase family ABBFA_RS06495 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABBFA_RS06500 PF00510 Cytochrome c oxidase subunit III ABBFA_RS06505 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABBFA_RS06510 PF06481 COX Aromatic Rich Motif ABBFA_RS06510 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABBFA_RS06520 PF02896 PEP-utilising enzyme, TIM barrel domain ABBFA_RS06520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABBFA_RS06520 PF00391 PEP-utilising enzyme, mobile domain ABBFA_RS06525 PF03618 Kinase/pyrophosphorylase ABBFA_RS06535 PF01522 Polysaccharide deacetylase ABBFA_RS06535 PF14883 Hypothetical glycosyl hydrolase family 13 ABBFA_RS06540 PF00535 Glycosyl transferase family 2 ABBFA_RS06545 PF13994 PgaD-like protein ABBFA_RS06555 PF00296 Luciferase-like monooxygenase ABBFA_RS06575 PF03466 LysR substrate binding domain ABBFA_RS06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS06585 PF03462 PCRF domain ABBFA_RS06585 PF00472 RF-1 domain ABBFA_RS06590 PF17827 PrmC N-terminal domain ABBFA_RS06590 PF13847 Methyltransferase domain ABBFA_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS06600 PF09084 NMT1/THI5 like ABBFA_RS06605 PF12833 Helix-turn-helix domain ABBFA_RS06610 PF00106 short chain dehydrogenase ABBFA_RS06615 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS06615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS06615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS06620 PF00501 AMP-binding enzyme ABBFA_RS06620 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS06625 PF01613 Flavin reductase like domain ABBFA_RS06630 PF00899 ThiF family ABBFA_RS06635 PF03109 ABC1 family ABBFA_RS06650 PF03814 Potassium-transporting ATPase A subunit ABBFA_RS06660 PF02669 K+-transporting ATPase, c chain ABBFA_RS06665 PF13493 Domain of unknown function (DUF4118) ABBFA_RS06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS06665 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS06665 PF02702 Osmosensitive K+ channel His kinase sensor domain ABBFA_RS06670 PF00072 Response regulator receiver domain ABBFA_RS06670 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS06675 PF00120 Glutamine synthetase, catalytic domain ABBFA_RS06685 PF03232 Ubiquinone biosynthesis protein COQ7 ABBFA_RS06690 PF07690 Major Facilitator Superfamily ABBFA_RS06695 PF17243 POTRA domain TamA domain 1 ABBFA_RS06695 PF01103 Surface antigen ABBFA_RS06695 PF07244 Surface antigen variable number repeat ABBFA_RS06715 PF11791 Aconitate B N-terminal domain ABBFA_RS06715 PF00330 Aconitase family (aconitate hydratase) ABBFA_RS06715 PF06434 Aconitate hydratase 2 N-terminus ABBFA_RS06725 PF00027 Cyclic nucleotide-binding domain ABBFA_RS06725 PF00520 Ion transport protein ABBFA_RS06730 PF07690 Major Facilitator Superfamily ABBFA_RS06745 PF03466 LysR substrate binding domain ABBFA_RS06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS06750 PF04284 Protein of unknown function (DUF441) ABBFA_RS06760 PF00849 RNA pseudouridylate synthase ABBFA_RS06760 PF01479 S4 domain ABBFA_RS06775 PF01479 S4 domain ABBFA_RS06775 PF00849 RNA pseudouridylate synthase ABBFA_RS06780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABBFA_RS06785 PF08676 MutL C terminal dimerisation domain ABBFA_RS06785 PF01119 DNA mismatch repair protein, C-terminal domain ABBFA_RS06795 PF17209 Hfq protein ABBFA_RS06805 PF00881 Nitroreductase family ABBFA_RS06815 PF00149 Calcineurin-like phosphoesterase ABBFA_RS06820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABBFA_RS06825 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABBFA_RS06825 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABBFA_RS06830 PF00958 GMP synthase C terminal domain ABBFA_RS06830 PF00117 Glutamine amidotransferase class-I ABBFA_RS06830 PF02540 NAD synthase ABBFA_RS06835 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABBFA_RS06840 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABBFA_RS06845 PF13520 Amino acid permease ABBFA_RS06850 PF00171 Aldehyde dehydrogenase family ABBFA_RS06865 PF00465 Iron-containing alcohol dehydrogenase ABBFA_RS06870 PF14493 Helix-turn-helix domain ABBFA_RS06870 PF05970 PIF1-like helicase ABBFA_RS06880 PF02110 Hydroxyethylthiazole kinase family ABBFA_RS06895 PF01433 Peptidase family M1 domain ABBFA_RS06895 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABBFA_RS06895 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABBFA_RS06910 PF00577 Outer membrane usher protein ABBFA_RS06910 PF13954 PapC N-terminal domain ABBFA_RS06910 PF13953 PapC C-terminal domain ABBFA_RS06935 PF01817 Chorismate mutase type II ABBFA_RS06940 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS06955 PF02224 Cytidylate kinase ABBFA_RS06975 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS06980 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS06980 PF00593 TonB dependent receptor ABBFA_RS06985 PF00924 Mechanosensitive ion channel ABBFA_RS07015 PF00593 TonB dependent receptor ABBFA_RS07015 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS07035 PF00005 ABC transporter ABBFA_RS07035 PF12848 ABC transporter ABBFA_RS07040 PF00582 Universal stress protein family ABBFA_RS07055 PF00690 Cation transporter/ATPase, N-terminus ABBFA_RS07055 PF00689 Cation transporting ATPase, C-terminus ABBFA_RS07060 PF02308 MgtC family ABBFA_RS07065 PF03594 Benzoate membrane transport protein ABBFA_RS07070 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS07075 PF01810 LysE type translocator ABBFA_RS07080 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABBFA_RS07085 PF03466 LysR substrate binding domain ABBFA_RS07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS07095 PF00108 Thiolase, N-terminal domain ABBFA_RS07095 PF02803 Thiolase, C-terminal domain ABBFA_RS07105 PF01575 MaoC like domain ABBFA_RS07110 PF00144 Beta-lactamase ABBFA_RS07120 PF07690 Major Facilitator Superfamily ABBFA_RS07125 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABBFA_RS07125 PF12170 DNA polymerase III tau subunit V interacting with alpha ABBFA_RS07125 PF12169 DNA polymerase III subunits gamma and tau domain III ABBFA_RS07130 PF05506 Domain of unknown function (DUF756) ABBFA_RS07130 PF04185 Phosphoesterase family ABBFA_RS07135 PF03061 Thioesterase superfamily ABBFA_RS07140 PF00465 Iron-containing alcohol dehydrogenase ABBFA_RS07150 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABBFA_RS07155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABBFA_RS07155 PF01565 FAD binding domain ABBFA_RS07170 PF01645 Conserved region in glutamate synthase ABBFA_RS07190 PF12832 MFS_1 like family ABBFA_RS07200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABBFA_RS07200 PF00289 Biotin carboxylase, N-terminal domain ABBFA_RS07200 PF02785 Biotin carboxylase C-terminal domain ABBFA_RS07205 PF00364 Biotin-requiring enzyme ABBFA_RS07210 PF01220 Dehydroquinase class II ABBFA_RS07215 PF13438 Domain of unknown function (DUF4113) ABBFA_RS07215 PF00817 impB/mucB/samB family ABBFA_RS07215 PF11799 impB/mucB/samB family C-terminal domain ABBFA_RS07225 PF00005 ABC transporter ABBFA_RS07230 PF00072 Response regulator receiver domain ABBFA_RS07230 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS07240 PF04324 BFD-like [2Fe-2S] binding domain ABBFA_RS07240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABBFA_RS07240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABBFA_RS07240 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS07240 PF13806 Rieske-like [2Fe-2S] domain ABBFA_RS07240 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABBFA_RS07245 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABBFA_RS07245 PF04324 BFD-like [2Fe-2S] binding domain ABBFA_RS07245 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS07245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABBFA_RS07245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABBFA_RS07250 PF01568 Molydopterin dinucleotide binding domain ABBFA_RS07250 PF00384 Molybdopterin oxidoreductase ABBFA_RS07250 PF04324 BFD-like [2Fe-2S] binding domain ABBFA_RS07250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABBFA_RS07255 PF12804 MobA-like NTP transferase domain ABBFA_RS07260 PF01568 Molydopterin dinucleotide binding domain ABBFA_RS07260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABBFA_RS07260 PF00384 Molybdopterin oxidoreductase ABBFA_RS07265 PF06463 Molybdenum Cofactor Synthesis C ABBFA_RS07265 PF04055 Radical SAM superfamily ABBFA_RS07275 PF02391 MoaE protein ABBFA_RS07280 PF01967 MoaC family ABBFA_RS07280 PF00994 Probable molybdopterin binding domain ABBFA_RS07285 PF03454 MoeA C-terminal region (domain IV) ABBFA_RS07285 PF00994 Probable molybdopterin binding domain ABBFA_RS07285 PF03453 MoeA N-terminal region (domain I and II) ABBFA_RS07290 PF01638 HxlR-like helix-turn-helix ABBFA_RS07295 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS07295 PF00155 Aminotransferase class I and II ABBFA_RS07300 PF00892 EamA-like transporter family ABBFA_RS07320 PF02635 DsrE/DsrF-like family ABBFA_RS07325 PF16363 GDP-mannose 4,6 dehydratase ABBFA_RS07330 PF10415 Fumarase C C-terminus ABBFA_RS07330 PF00206 Lyase ABBFA_RS07355 PF01266 FAD dependent oxidoreductase ABBFA_RS07365 PF02542 YgbB family ABBFA_RS07375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABBFA_RS07375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABBFA_RS07380 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS07385 PF00158 Sigma-54 interaction domain ABBFA_RS07385 PF00072 Response regulator receiver domain ABBFA_RS07385 PF02954 Bacterial regulatory protein, Fis family ABBFA_RS07390 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS07390 PF00989 PAS fold ABBFA_RS07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS07400 PF00919 Uncharacterized protein family UPF0004 ABBFA_RS07400 PF04055 Radical SAM superfamily ABBFA_RS07400 PF18693 TRAM domain ABBFA_RS07405 PF00696 Amino acid kinase family ABBFA_RS07410 PF01765 Ribosome recycling factor ABBFA_RS07415 PF01255 Putative undecaprenyl diphosphate synthase ABBFA_RS07425 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABBFA_RS07425 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABBFA_RS07425 PF13288 DXP reductoisomerase C-terminal domain ABBFA_RS07430 PF13180 PDZ domain ABBFA_RS07430 PF02163 Peptidase family M50 ABBFA_RS07430 PF17820 PDZ domain ABBFA_RS07435 PF01103 Surface antigen ABBFA_RS07435 PF07244 Surface antigen variable number repeat ABBFA_RS07445 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS07445 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABBFA_RS07450 PF07977 FabA-like domain ABBFA_RS07455 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABBFA_RS07455 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS07470 PF02631 RecX family ABBFA_RS07475 PF00154 recA bacterial DNA recombination protein ABBFA_RS07480 PF01479 S4 domain ABBFA_RS07485 PF13419 Haloacid dehalogenase-like hydrolase ABBFA_RS07510 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS07515 PF00266 Aminotransferase class-V ABBFA_RS07520 PF00324 Amino acid permease ABBFA_RS07530 PF00082 Subtilase family ABBFA_RS07530 PF05922 Peptidase inhibitor I9 ABBFA_RS07535 PF00916 Sulfate permease family ABBFA_RS07535 PF01740 STAS domain ABBFA_RS07540 PF02586 SOS response associated peptidase (SRAP) ABBFA_RS07545 PF07995 Glucose / Sorbosone dehydrogenase ABBFA_RS07555 PF03707 Bacterial signalling protein N terminal repeat ABBFA_RS07555 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS07555 PF00563 EAL domain ABBFA_RS07575 PF02378 Phosphotransferase system, EIIC ABBFA_RS07575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABBFA_RS07580 PF00294 pfkB family carbohydrate kinase ABBFA_RS07585 PF00381 PTS HPr component phosphorylation site ABBFA_RS07585 PF02896 PEP-utilising enzyme, TIM barrel domain ABBFA_RS07585 PF00391 PEP-utilising enzyme, mobile domain ABBFA_RS07585 PF05524 PEP-utilising enzyme, N-terminal ABBFA_RS07585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABBFA_RS07610 PF05525 Branched-chain amino acid transport protein ABBFA_RS07615 PF00557 Metallopeptidase family M24 ABBFA_RS07620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS07620 PF03466 LysR substrate binding domain ABBFA_RS07630 PF00462 Glutaredoxin ABBFA_RS07635 PF00202 Aminotransferase class-III ABBFA_RS07640 PF00571 CBS domain ABBFA_RS07640 PF00478 IMP dehydrogenase / GMP reductase domain ABBFA_RS07665 PF02881 SRP54-type protein, helical bundle domain ABBFA_RS07665 PF00448 SRP54-type protein, GTPase domain ABBFA_RS07675 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABBFA_RS07685 PF08173 Membrane bound YbgT-like protein ABBFA_RS07690 PF02322 Cytochrome bd terminal oxidase subunit II ABBFA_RS07695 PF01654 Cytochrome bd terminal oxidase subunit I ABBFA_RS07705 PF07290 Protein of unknown function (DUF1449) ABBFA_RS07715 PF00294 pfkB family carbohydrate kinase ABBFA_RS07720 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS07720 PF00593 TonB dependent receptor ABBFA_RS07725 PF05193 Peptidase M16 inactive domain ABBFA_RS07725 PF08367 Peptidase M16C associated ABBFA_RS07725 PF00675 Insulinase (Peptidase family M16) ABBFA_RS07730 PF02253 Phospholipase A1 ABBFA_RS07735 PF02386 Cation transport protein ABBFA_RS07740 PF02080 TrkA-C domain ABBFA_RS07740 PF02254 TrkA-N domain ABBFA_RS07745 PF00585 C-terminal regulatory domain of Threonine dehydratase ABBFA_RS07745 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS07750 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABBFA_RS07765 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABBFA_RS07765 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABBFA_RS07775 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABBFA_RS07780 PF02861 Clp amino terminal domain, pathogenicity island component ABBFA_RS07780 PF17871 AAA lid domain ABBFA_RS07780 PF07724 AAA domain (Cdc48 subfamily) ABBFA_RS07780 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS07780 PF10431 C-terminal, D2-small domain, of ClpB protein ABBFA_RS07785 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABBFA_RS07790 PF00793 DAHP synthetase I family ABBFA_RS07805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABBFA_RS07805 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS07835 PF06418 CTP synthase N-terminus ABBFA_RS07835 PF00117 Glutamine amidotransferase class-I ABBFA_RS07840 PF00793 DAHP synthetase I family ABBFA_RS07845 PF03952 Enolase, N-terminal domain ABBFA_RS07845 PF00113 Enolase, C-terminal TIM barrel domain ABBFA_RS07850 PF04239 Protein of unknown function (DUF421) ABBFA_RS07855 PF04977 Septum formation initiator ABBFA_RS07860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABBFA_RS07865 PF01144 Coenzyme A transferase ABBFA_RS07870 PF01144 Coenzyme A transferase ABBFA_RS07875 PF00108 Thiolase, N-terminal domain ABBFA_RS07875 PF02803 Thiolase, C-terminal domain ABBFA_RS07880 PF00206 Lyase ABBFA_RS07880 PF10397 Adenylosuccinate lyase C-terminus ABBFA_RS07885 PF00561 alpha/beta hydrolase fold ABBFA_RS07890 PF07690 Major Facilitator Superfamily ABBFA_RS07895 PF02627 Carboxymuconolactone decarboxylase family ABBFA_RS07900 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABBFA_RS07900 PF00775 Dioxygenase ABBFA_RS07905 PF00775 Dioxygenase ABBFA_RS07910 PF01487 Type I 3-dehydroquinase ABBFA_RS07915 PF05048 Periplasmic copper-binding protein (NosD) ABBFA_RS07920 PF04966 Carbohydrate-selective porin, OprB family ABBFA_RS07925 PF01011 PQQ enzyme repeat ABBFA_RS07925 PF13360 PQQ-like domain ABBFA_RS07935 PF04143 Sulphur transport ABBFA_RS07945 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS07950 PF09339 IclR helix-turn-helix domain ABBFA_RS07950 PF01614 Bacterial transcriptional regulator ABBFA_RS07955 PF03466 LysR substrate binding domain ABBFA_RS07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS07960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS07960 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS07960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS07975 PF00106 short chain dehydrogenase ABBFA_RS07985 PF07690 Major Facilitator Superfamily ABBFA_RS07995 PF01425 Amidase ABBFA_RS08000 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS08015 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABBFA_RS08015 PF00355 Rieske [2Fe-2S] domain ABBFA_RS08030 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS08030 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS08035 PF01613 Flavin reductase like domain ABBFA_RS08040 PF02311 AraC-like ligand binding domain ABBFA_RS08040 PF12833 Helix-turn-helix domain ABBFA_RS08045 PF01179 Copper amine oxidase, enzyme domain ABBFA_RS08045 PF07833 Copper amine oxidase N-terminal domain ABBFA_RS08045 PF02727 Copper amine oxidase, N2 domain ABBFA_RS08045 PF02728 Copper amine oxidase, N3 domain ABBFA_RS08055 PF00171 Aldehyde dehydrogenase family ABBFA_RS08060 PF01804 Penicillin amidase ABBFA_RS08065 PF12146 Serine aminopeptidase, S33 ABBFA_RS08070 PF00108 Thiolase, N-terminal domain ABBFA_RS08070 PF02803 Thiolase, C-terminal domain ABBFA_RS08080 PF01144 Coenzyme A transferase ABBFA_RS08085 PF01144 Coenzyme A transferase ABBFA_RS08090 PF00775 Dioxygenase ABBFA_RS08090 PF04444 Catechol dioxygenase N terminus ABBFA_RS08095 PF02426 Muconolactone delta-isomerase ABBFA_RS08100 PF13378 Enolase C-terminal domain-like ABBFA_RS08100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABBFA_RS08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08105 PF03466 LysR substrate binding domain ABBFA_RS08115 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS08115 PF07729 FCD domain ABBFA_RS08120 PF00920 Dehydratase family ABBFA_RS08125 PF07690 Major Facilitator Superfamily ABBFA_RS08135 PF00171 Aldehyde dehydrogenase family ABBFA_RS08145 PF00561 alpha/beta hydrolase fold ABBFA_RS08150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABBFA_RS08150 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS08155 PF00106 short chain dehydrogenase ABBFA_RS08165 PF09278 MerR, DNA binding ABBFA_RS08165 PF00376 MerR family regulatory protein ABBFA_RS08175 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS08185 PF12706 Beta-lactamase superfamily domain ABBFA_RS08190 PF08359 YsiA-like protein, C-terminal region ABBFA_RS08190 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS08195 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABBFA_RS08195 PF12833 Helix-turn-helix domain ABBFA_RS08205 PF06314 Acetoacetate decarboxylase (ADC) ABBFA_RS08215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABBFA_RS08220 PF07995 Glucose / Sorbosone dehydrogenase ABBFA_RS08235 PF00857 Isochorismatase family ABBFA_RS08240 PF03466 LysR substrate binding domain ABBFA_RS08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08245 PF07995 Glucose / Sorbosone dehydrogenase ABBFA_RS08250 PF00999 Sodium/hydrogen exchanger family ABBFA_RS08250 PF02254 TrkA-N domain ABBFA_RS08260 PF07687 Peptidase dimerisation domain ABBFA_RS08260 PF01546 Peptidase family M20/M25/M40 ABBFA_RS08310 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) ABBFA_RS08315 PF07690 Major Facilitator Superfamily ABBFA_RS08320 PF04909 Amidohydrolase ABBFA_RS08330 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS08330 PF07702 UTRA domain ABBFA_RS08335 PF08450 SMP-30/Gluconolactonase/LRE-like region ABBFA_RS08345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08345 PF03466 LysR substrate binding domain ABBFA_RS08360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABBFA_RS08360 PF00529 HlyD membrane-fusion protein of T1SS ABBFA_RS08375 PF00171 Aldehyde dehydrogenase family ABBFA_RS08380 PF00920 Dehydratase family ABBFA_RS08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08390 PF03466 LysR substrate binding domain ABBFA_RS08395 PF01370 NAD dependent epimerase/dehydratase family ABBFA_RS08400 PF07690 Major Facilitator Superfamily ABBFA_RS08405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABBFA_RS08405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABBFA_RS08420 PF14572 Phosphoribosyl synthetase-associated domain ABBFA_RS08420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABBFA_RS08425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABBFA_RS08440 PF00196 Bacterial regulatory proteins, luxR family ABBFA_RS08440 PF03472 Autoinducer binding domain ABBFA_RS08445 PF01425 Amidase ABBFA_RS08450 PF13533 Biotin-lipoyl like ABBFA_RS08455 PF07690 Major Facilitator Superfamily ABBFA_RS08480 PF01975 Survival protein SurE ABBFA_RS08490 PF13291 ACT domain ABBFA_RS08490 PF04607 Region found in RelA / SpoT proteins ABBFA_RS08490 PF02824 TGS domain ABBFA_RS08495 PF00271 Helicase conserved C-terminal domain ABBFA_RS08495 PF17757 UvrB interaction domain ABBFA_RS08495 PF04851 Type III restriction enzyme, res subunit ABBFA_RS08495 PF02151 UvrB/uvrC motif ABBFA_RS08495 PF12344 Ultra-violet resistance protein B ABBFA_RS08530 PF13673 Acetyltransferase (GNAT) domain ABBFA_RS08535 PF12146 Serine aminopeptidase, S33 ABBFA_RS08540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08540 PF03466 LysR substrate binding domain ABBFA_RS08555 PF12146 Serine aminopeptidase, S33 ABBFA_RS08560 PF02311 AraC-like ligand binding domain ABBFA_RS08560 PF12833 Helix-turn-helix domain ABBFA_RS08570 PF16527 Two-component sensor protein CpxA, periplasmic domain ABBFA_RS08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS08570 PF00672 HAMP domain ABBFA_RS08570 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS08575 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS08575 PF00072 Response regulator receiver domain ABBFA_RS08580 PF00529 HlyD membrane-fusion protein of T1SS ABBFA_RS08580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABBFA_RS08585 PF00873 AcrB/AcrD/AcrF family ABBFA_RS08590 PF02321 Outer membrane efflux protein ABBFA_RS08595 PF12146 Serine aminopeptidase, S33 ABBFA_RS08600 PF00743 Flavin-binding monooxygenase-like ABBFA_RS08610 PF01266 FAD dependent oxidoreductase ABBFA_RS08630 PF16970 Type-1 fimbrial protein, A ABBFA_RS08635 PF02753 Pili assembly chaperone PapD, C-terminal domain ABBFA_RS08635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABBFA_RS08640 PF13954 PapC N-terminal domain ABBFA_RS08640 PF13953 PapC C-terminal domain ABBFA_RS08640 PF00577 Outer membrane usher protein ABBFA_RS08655 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS08655 PF00107 Zinc-binding dehydrogenase ABBFA_RS08665 PF00199 Catalase ABBFA_RS08680 PF13091 PLD-like domain ABBFA_RS08700 PF01244 Membrane dipeptidase (Peptidase family M19) ABBFA_RS08705 PF04055 Radical SAM superfamily ABBFA_RS08705 PF13186 Iron-sulfur cluster-binding domain ABBFA_RS08710 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABBFA_RS08715 PF03070 TENA/THI-4/PQQC family ABBFA_RS08720 PF12706 Beta-lactamase superfamily domain ABBFA_RS08725 PF08042 PqqA family ABBFA_RS08730 PF13089 Polyphosphate kinase N-terminal domain ABBFA_RS08730 PF17941 Polyphosphate kinase C-terminal domain 1 ABBFA_RS08730 PF02503 Polyphosphate kinase middle domain ABBFA_RS08730 PF13090 Polyphosphate kinase C-terminal domain 2 ABBFA_RS08735 PF00149 Calcineurin-like phosphoesterase ABBFA_RS08745 PF00857 Isochorismatase family ABBFA_RS08745 PF00550 Phosphopantetheine attachment site ABBFA_RS08750 PF00106 short chain dehydrogenase ABBFA_RS08755 PF03459 TOBE domain ABBFA_RS08755 PF00005 ABC transporter ABBFA_RS08760 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08770 PF03459 TOBE domain ABBFA_RS08775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABBFA_RS08775 PF00355 Rieske [2Fe-2S] domain ABBFA_RS08780 PF00866 Ring hydroxylating beta subunit ABBFA_RS08785 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS08785 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS08785 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS08790 PF14525 AraC-binding-like domain ABBFA_RS08790 PF12833 Helix-turn-helix domain ABBFA_RS08800 PF01613 Flavin reductase like domain ABBFA_RS08815 PF01738 Dienelactone hydrolase family ABBFA_RS08820 PF07690 Major Facilitator Superfamily ABBFA_RS08825 PF06719 AraC-type transcriptional regulator N-terminus ABBFA_RS08825 PF12833 Helix-turn-helix domain ABBFA_RS08845 PF03466 LysR substrate binding domain ABBFA_RS08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08850 PF01144 Coenzyme A transferase ABBFA_RS08855 PF01144 Coenzyme A transferase ABBFA_RS08860 PF02667 Short chain fatty acid transporter ABBFA_RS08865 PF00108 Thiolase, N-terminal domain ABBFA_RS08865 PF02803 Thiolase, C-terminal domain ABBFA_RS08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08870 PF03466 LysR substrate binding domain ABBFA_RS08875 PF03466 LysR substrate binding domain ABBFA_RS08875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS08890 PF00206 Lyase ABBFA_RS08890 PF10415 Fumarase C C-terminus ABBFA_RS08895 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS08895 PF00593 TonB dependent receptor ABBFA_RS08900 PF00083 Sugar (and other) transporter ABBFA_RS08915 PF00005 ABC transporter ABBFA_RS08920 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS08925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABBFA_RS08940 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS08940 PF07702 UTRA domain ABBFA_RS08950 PF02525 Flavodoxin-like fold ABBFA_RS08955 PF01638 HxlR-like helix-turn-helix ABBFA_RS08960 PF12833 Helix-turn-helix domain ABBFA_RS08960 PF06445 GyrI-like small molecule binding domain ABBFA_RS08975 PF01925 Sulfite exporter TauE/SafE ABBFA_RS08980 PF04273 Putative phosphatase (DUF442) ABBFA_RS08980 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS08985 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS08985 PF04273 Putative phosphatase (DUF442) ABBFA_RS08990 PF00158 Sigma-54 interaction domain ABBFA_RS08990 PF00072 Response regulator receiver domain ABBFA_RS08990 PF02954 Bacterial regulatory protein, Fis family ABBFA_RS08995 PF01062 Bestrophin, RFP-TM, chloride channel ABBFA_RS09000 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS09000 PF00107 Zinc-binding dehydrogenase ABBFA_RS09005 PF00106 short chain dehydrogenase ABBFA_RS09010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABBFA_RS09010 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS09015 PF02817 e3 binding domain ABBFA_RS09015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABBFA_RS09015 PF00364 Biotin-requiring enzyme ABBFA_RS09020 PF02780 Transketolase, C-terminal domain ABBFA_RS09020 PF02779 Transketolase, pyrimidine binding domain ABBFA_RS09025 PF00676 Dehydrogenase E1 component ABBFA_RS09030 PF04055 Radical SAM superfamily ABBFA_RS09045 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS09045 PF08448 PAS fold ABBFA_RS09050 PF01264 Chorismate synthase ABBFA_RS09055 PF05175 Methyltransferase small domain ABBFA_RS09060 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS09070 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS09070 PF17862 AAA+ lid domain ABBFA_RS09070 PF01434 Peptidase family M41 ABBFA_RS09080 PF05166 YcgL domain ABBFA_RS09100 PF01612 3'-5' exonuclease ABBFA_RS09100 PF00570 HRDC domain ABBFA_RS09105 PF13662 Toprim domain ABBFA_RS09105 PF02132 RecR protein ABBFA_RS09110 PF02575 YbaB/EbfC DNA-binding family ABBFA_RS09120 PF01053 Cys/Met metabolism PLP-dependent enzyme ABBFA_RS09125 PF00561 alpha/beta hydrolase fold ABBFA_RS09130 PF08241 Methyltransferase domain ABBFA_RS09160 PF01230 HIT domain ABBFA_RS09185 PF02684 Lipid-A-disaccharide synthetase ABBFA_RS09190 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS09190 PF00593 TonB dependent receptor ABBFA_RS09210 PF01925 Sulfite exporter TauE/SafE ABBFA_RS09215 PF00793 DAHP synthetase I family ABBFA_RS09220 PF02654 Cobalamin-5-phosphate synthase ABBFA_RS09230 PF00300 Histidine phosphatase superfamily (branch 1) ABBFA_RS09235 PF02277 Phosphoribosyltransferase ABBFA_RS09240 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABBFA_RS09250 PF13419 Haloacid dehalogenase-like hydrolase ABBFA_RS09275 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS09275 PF00593 TonB dependent receptor ABBFA_RS09280 PF03737 Aldolase/RraA ABBFA_RS09290 PF04183 IucA / IucC family ABBFA_RS09290 PF06276 Ferric iron reductase FhuF-like transporter ABBFA_RS09295 PF06276 Ferric iron reductase FhuF-like transporter ABBFA_RS09295 PF04183 IucA / IucC family ABBFA_RS09300 PF07690 Major Facilitator Superfamily ABBFA_RS09305 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABBFA_RS09310 PF04183 IucA / IucC family ABBFA_RS09310 PF06276 Ferric iron reductase FhuF-like transporter ABBFA_RS09315 PF04073 Aminoacyl-tRNA editing domain ABBFA_RS09325 PF03109 ABC1 family ABBFA_RS09330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS09330 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS09330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS09335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS09335 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS09335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS09340 PF00487 Fatty acid desaturase ABBFA_RS09345 PF12852 Cupin ABBFA_RS09345 PF12833 Helix-turn-helix domain ABBFA_RS09350 PF09312 SurA N-terminal domain ABBFA_RS09350 PF00639 PPIC-type PPIASE domain ABBFA_RS09355 PF00216 Bacterial DNA-binding protein ABBFA_RS09370 PF02082 Transcriptional regulator ABBFA_RS09375 PF00266 Aminotransferase class-V ABBFA_RS09380 PF01592 NifU-like N terminal domain ABBFA_RS09385 PF01521 Iron-sulphur cluster biosynthesis ABBFA_RS09390 PF07743 HSCB C-terminal oligomerisation domain ABBFA_RS09390 PF00226 DnaJ domain ABBFA_RS09395 PF00012 Hsp70 protein ABBFA_RS09400 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS09405 PF00211 Adenylate and Guanylate cyclase catalytic domain ABBFA_RS09415 PF02559 CarD-like/TRCF domain ABBFA_RS09415 PF00270 DEAD/DEAH box helicase ABBFA_RS09415 PF00271 Helicase conserved C-terminal domain ABBFA_RS09415 PF03461 TRCF domain ABBFA_RS09415 PF17757 UvrB interaction domain ABBFA_RS09435 PF03737 Aldolase/RraA ABBFA_RS09440 PF13460 NAD(P)H-binding ABBFA_RS09445 PF01649 Ribosomal protein S20 ABBFA_RS09455 PF00459 Inositol monophosphatase family ABBFA_RS09470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABBFA_RS09470 PF00005 ABC transporter ABBFA_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS09485 PF01432 Peptidase family M3 ABBFA_RS09500 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS09500 PF00593 TonB dependent receptor ABBFA_RS09505 PF03544 Gram-negative bacterial TonB protein C-terminal ABBFA_RS09510 PF01618 MotA/TolQ/ExbB proton channel family ABBFA_RS09515 PF02472 Biopolymer transport protein ExbD/TolR ABBFA_RS09520 PF02472 Biopolymer transport protein ExbD/TolR ABBFA_RS09530 PF01274 Malate synthase ABBFA_RS09535 PF03969 AFG1-like ATPase ABBFA_RS09545 PF00743 Flavin-binding monooxygenase-like ABBFA_RS09555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABBFA_RS09565 PF00216 Bacterial DNA-binding protein ABBFA_RS09570 PF00575 S1 RNA binding domain ABBFA_RS09575 PF02224 Cytidylate kinase ABBFA_RS09585 PF14437 MafB19-like deaminase ABBFA_RS09595 PF03167 Uracil DNA glycosylase superfamily ABBFA_RS09605 PF03934 Type II secretion system (T2SS), protein K ABBFA_RS09610 PF07963 Prokaryotic N-terminal methylation motif ABBFA_RS09610 PF11612 Type II secretion system (T2SS), protein J ABBFA_RS09615 PF02501 Type II secretion system (T2SS), protein I ABBFA_RS09615 PF07963 Prokaryotic N-terminal methylation motif ABBFA_RS09630 PF01026 TatD related DNase ABBFA_RS09640 PF09115 DNA polymerase III, delta subunit, C terminal ABBFA_RS09645 PF02348 Cytidylyltransferase ABBFA_RS09650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABBFA_RS09655 PF00664 ABC transporter transmembrane region ABBFA_RS09655 PF00005 ABC transporter ABBFA_RS09665 PF01618 MotA/TolQ/ExbB proton channel family ABBFA_RS09670 PF17762 HTH domain found in ParB protein ABBFA_RS09670 PF02195 ParB-like nuclease domain ABBFA_RS09675 PF13614 AAA domain ABBFA_RS09680 PF02527 rRNA small subunit methyltransferase G ABBFA_RS09685 PF00483 Nucleotidyl transferase ABBFA_RS09690 PF01636 Phosphotransferase enzyme family ABBFA_RS09695 PF03968 OstA-like protein ABBFA_RS09695 PF04453 LPS transport system D ABBFA_RS09700 PF09312 SurA N-terminal domain ABBFA_RS09700 PF00639 PPIC-type PPIASE domain ABBFA_RS09705 PF01116 Fructose-bisphosphate aldolase class-II ABBFA_RS09715 PF00162 Phosphoglycerate kinase ABBFA_RS09725 PF02545 Maf-like protein ABBFA_RS09730 PF08007 Cupin superfamily protein ABBFA_RS09745 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS09750 PF06912 Protein of unknown function (DUF1275) ABBFA_RS09755 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABBFA_RS09760 PF00005 ABC transporter ABBFA_RS09760 PF00664 ABC transporter transmembrane region ABBFA_RS09770 PF12833 Helix-turn-helix domain ABBFA_RS09770 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABBFA_RS09775 PF01597 Glycine cleavage H-protein ABBFA_RS09780 PF02146 Sir2 family ABBFA_RS09785 PF00474 Sodium:solute symporter family ABBFA_RS09790 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS09795 PF00171 Aldehyde dehydrogenase family ABBFA_RS09795 PF01619 Proline dehydrogenase ABBFA_RS09795 PF14850 DNA-binding domain of Proline dehydrogenase ABBFA_RS09795 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABBFA_RS09800 PF04229 GrpB protein ABBFA_RS09805 PF05958 tRNA (Uracil-5-)-methyltransferase ABBFA_RS09815 PF09992 Phosphodiester glycosidase ABBFA_RS09825 PF04264 YceI-like domain ABBFA_RS09835 PF02780 Transketolase, C-terminal domain ABBFA_RS09835 PF02779 Transketolase, pyrimidine binding domain ABBFA_RS09835 PF00456 Transketolase, thiamine diphosphate binding domain ABBFA_RS09840 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABBFA_RS09840 PF02772 S-adenosylmethionine synthetase, central domain ABBFA_RS09840 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABBFA_RS09860 PF00905 Penicillin binding protein transpeptidase domain ABBFA_RS09875 PF02075 Crossover junction endodeoxyribonuclease RuvC ABBFA_RS09880 PF01256 Carbohydrate kinase ABBFA_RS09880 PF03853 YjeF-related protein N-terminus ABBFA_RS09885 PF08331 Domain of unknown function (DUF1730) ABBFA_RS09890 PF04055 Radical SAM superfamily ABBFA_RS09890 PF06968 Biotin and Thiamin Synthesis associated domain ABBFA_RS09905 PF16970 Type-1 fimbrial protein, A ABBFA_RS09910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABBFA_RS09910 PF02753 Pili assembly chaperone PapD, C-terminal domain ABBFA_RS09915 PF00577 Outer membrane usher protein ABBFA_RS09915 PF13953 PapC C-terminal domain ABBFA_RS09915 PF13954 PapC N-terminal domain ABBFA_RS09940 PF00892 EamA-like transporter family ABBFA_RS09950 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABBFA_RS09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS09960 PF03466 LysR substrate binding domain ABBFA_RS09980 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS09990 PF01709 Transcriptional regulator ABBFA_RS09995 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS10005 PF00005 ABC transporter ABBFA_RS10010 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS10015 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS10030 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS10030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS10040 PF00296 Luciferase-like monooxygenase ABBFA_RS10045 PF03180 NLPA lipoprotein ABBFA_RS10050 PF03180 NLPA lipoprotein ABBFA_RS10055 PF09383 NIL domain ABBFA_RS10055 PF00005 ABC transporter ABBFA_RS10060 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS10065 PF01926 50S ribosome-binding GTPase ABBFA_RS10065 PF06071 Protein of unknown function (DUF933) ABBFA_RS10090 PF03591 AzlC protein ABBFA_RS10095 PF05437 Branched-chain amino acid transport protein (AzlD) ABBFA_RS10105 PF02222 ATP-grasp domain ABBFA_RS10110 PF01909 Nucleotidyltransferase domain ABBFA_RS10110 PF01966 HD domain ABBFA_RS10110 PF08335 GlnD PII-uridylyltransferase ABBFA_RS10115 PF00155 Aminotransferase class I and II ABBFA_RS10125 PF12833 Helix-turn-helix domain ABBFA_RS10125 PF12852 Cupin ABBFA_RS10130 PF00255 Glutathione peroxidase ABBFA_RS10135 PF01641 SelR domain ABBFA_RS10140 PF00155 Aminotransferase class I and II ABBFA_RS10145 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS10150 PF17763 Glutaminase/Asparaginase C-terminal domain ABBFA_RS10150 PF00710 Asparaginase, N-terminal ABBFA_RS10155 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABBFA_RS10155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABBFA_RS10155 PF01336 OB-fold nucleic acid binding domain ABBFA_RS10155 PF02811 PHP domain ABBFA_RS10155 PF14579 Helix-hairpin-helix motif ABBFA_RS10160 PF00588 SpoU rRNA Methylase family ABBFA_RS10165 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS10180 PF13192 Thioredoxin domain ABBFA_RS10180 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10195 PF03466 LysR substrate binding domain ABBFA_RS10200 PF01758 Sodium Bile acid symporter family ABBFA_RS10205 PF01022 Bacterial regulatory protein, arsR family ABBFA_RS10210 PF03960 ArsC family ABBFA_RS10220 PF13382 Adenine deaminase C-terminal domain ABBFA_RS10220 PF01979 Amidohydrolase family ABBFA_RS10230 PF03466 LysR substrate binding domain ABBFA_RS10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABBFA_RS10245 PF01177 Asp/Glu/Hydantoin racemase ABBFA_RS10250 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABBFA_RS10255 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS10260 PF00005 ABC transporter ABBFA_RS10265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABBFA_RS10275 PF00083 Sugar (and other) transporter ABBFA_RS10280 PF00296 Luciferase-like monooxygenase ABBFA_RS10300 PF01654 Cytochrome bd terminal oxidase subunit I ABBFA_RS10305 PF02322 Cytochrome bd terminal oxidase subunit II ABBFA_RS10315 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS10315 PF00155 Aminotransferase class I and II ABBFA_RS10320 PF03466 LysR substrate binding domain ABBFA_RS10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10335 PF00698 Acyl transferase domain ABBFA_RS10340 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ABBFA_RS10350 PF01039 Carboxyl transferase domain ABBFA_RS10355 PF06857 Malonate decarboxylase delta subunit (MdcD) ABBFA_RS10360 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABBFA_RS10365 PF16957 Malonate decarboxylase, alpha subunit, transporter ABBFA_RS10370 PF07690 Major Facilitator Superfamily ABBFA_RS10385 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS10390 PF04172 LrgB-like family ABBFA_RS10395 PF03788 LrgA family ABBFA_RS10400 PF03466 LysR substrate binding domain ABBFA_RS10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10405 PF02798 Glutathione S-transferase, N-terminal domain ABBFA_RS10405 PF14834 Glutathione S-transferase, C-terminal domain ABBFA_RS10410 PF02798 Glutathione S-transferase, N-terminal domain ABBFA_RS10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10415 PF03466 LysR substrate binding domain ABBFA_RS10425 PF00581 Rhodanese-like domain ABBFA_RS10430 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS10440 PF00266 Aminotransferase class-V ABBFA_RS10445 PF01810 LysE type translocator ABBFA_RS10450 PF03466 LysR substrate binding domain ABBFA_RS10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10455 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABBFA_RS10460 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABBFA_RS10465 PF00005 ABC transporter ABBFA_RS10470 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS10475 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS10490 PF00072 Response regulator receiver domain ABBFA_RS10495 PF00072 Response regulator receiver domain ABBFA_RS10495 PF09308 LuxQ, periplasmic ABBFA_RS10495 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS10505 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS10505 PF13404 AsnC-type helix-turn-helix domain ABBFA_RS10515 PF00717 Peptidase S24-like ABBFA_RS10540 PF00199 Catalase ABBFA_RS10540 PF06628 Catalase-related immune-responsive ABBFA_RS10540 PF18011 C-terminal domain found in long catalases ABBFA_RS10550 PF02464 Competence-damaged protein ABBFA_RS10550 PF18146 Damage-inducible protein CinA KH domain ABBFA_RS10550 PF00994 Probable molybdopterin binding domain ABBFA_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10580 PF03466 LysR substrate binding domain ABBFA_RS10600 PF00501 AMP-binding enzyme ABBFA_RS10600 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS10605 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS10610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS10610 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS10610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS10615 PF01039 Carboxyl transferase domain ABBFA_RS10620 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS10625 PF02785 Biotin carboxylase C-terminal domain ABBFA_RS10625 PF18140 Propionyl-coenzyme A carboxylase BT domain ABBFA_RS10625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABBFA_RS10625 PF00364 Biotin-requiring enzyme ABBFA_RS10625 PF00289 Biotin carboxylase, N-terminal domain ABBFA_RS10630 PF00682 HMGL-like ABBFA_RS10635 PF03466 LysR substrate binding domain ABBFA_RS10635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10650 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS10650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS10650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS10650 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABBFA_RS10660 PF07690 Major Facilitator Superfamily ABBFA_RS10670 PF01144 Coenzyme A transferase ABBFA_RS10675 PF01144 Coenzyme A transferase ABBFA_RS10680 PF07690 Major Facilitator Superfamily ABBFA_RS10685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS10685 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS10685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS10690 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS10700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABBFA_RS10700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABBFA_RS10700 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABBFA_RS10705 PF00108 Thiolase, N-terminal domain ABBFA_RS10705 PF02803 Thiolase, C-terminal domain ABBFA_RS10710 PF09339 IclR helix-turn-helix domain ABBFA_RS10715 PF07690 Major Facilitator Superfamily ABBFA_RS10720 PF03060 Nitronate monooxygenase ABBFA_RS10725 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS10730 PF09339 IclR helix-turn-helix domain ABBFA_RS10735 PF02515 CoA-transferase family III ABBFA_RS10740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS10740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS10740 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS10745 PF07690 Major Facilitator Superfamily ABBFA_RS10750 PF13419 Haloacid dehalogenase-like hydrolase ABBFA_RS10755 PF00266 Aminotransferase class-V ABBFA_RS10760 PF01266 FAD dependent oxidoreductase ABBFA_RS10765 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS10770 PF08402 TOBE domain ABBFA_RS10770 PF00005 ABC transporter ABBFA_RS10780 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS10780 PF07702 UTRA domain ABBFA_RS10785 PF01494 FAD binding domain ABBFA_RS10790 PF09339 IclR helix-turn-helix domain ABBFA_RS10790 PF01614 Bacterial transcriptional regulator ABBFA_RS10795 PF02525 Flavodoxin-like fold ABBFA_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS10800 PF03466 LysR substrate binding domain ABBFA_RS10805 PF02627 Carboxymuconolactone decarboxylase family ABBFA_RS10810 PF00171 Aldehyde dehydrogenase family ABBFA_RS10820 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABBFA_RS10830 PF00171 Aldehyde dehydrogenase family ABBFA_RS10835 PF00296 Luciferase-like monooxygenase ABBFA_RS10840 PF01613 Flavin reductase like domain ABBFA_RS10845 PF12697 Alpha/beta hydrolase family ABBFA_RS10865 PF01292 Prokaryotic cytochrome b561 ABBFA_RS10870 PF00199 Catalase ABBFA_RS10875 PF07690 Major Facilitator Superfamily ABBFA_RS10880 PF00682 HMGL-like ABBFA_RS10885 PF02515 CoA-transferase family III ABBFA_RS10915 PF00313 'Cold-shock' DNA-binding domain ABBFA_RS10950 PF00580 UvrD/REP helicase N-terminal domain ABBFA_RS10950 PF13361 UvrD-like helicase C-terminal domain ABBFA_RS10955 PF02463 RecF/RecN/SMC N terminal domain ABBFA_RS10960 PF03061 Thioesterase superfamily ABBFA_RS10965 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS10970 PF08223 PaaX-like protein C-terminal domain ABBFA_RS10970 PF07848 PaaX-like protein ABBFA_RS10975 PF00501 AMP-binding enzyme ABBFA_RS10975 PF14535 AMP-binding enzyme C-terminal domain ABBFA_RS10980 PF02803 Thiolase, C-terminal domain ABBFA_RS10980 PF00108 Thiolase, N-terminal domain ABBFA_RS10985 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABBFA_RS10985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABBFA_RS10985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABBFA_RS10990 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS10995 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS11000 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS11000 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS11000 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS11005 PF01883 Iron-sulfur cluster assembly protein ABBFA_RS11010 PF05138 Phenylacetic acid catabolic protein ABBFA_RS11015 PF06243 Phenylacetic acid degradation B ABBFA_RS11020 PF05138 Phenylacetic acid catabolic protein ABBFA_RS11025 PF00171 Aldehyde dehydrogenase family ABBFA_RS11025 PF01575 MaoC like domain ABBFA_RS11030 PF03315 Serine dehydratase beta chain ABBFA_RS11030 PF03313 Serine dehydratase alpha chain ABBFA_RS11035 PF13520 Amino acid permease ABBFA_RS11040 PF00171 Aldehyde dehydrogenase family ABBFA_RS11045 PF00083 Sugar (and other) transporter ABBFA_RS11055 PF04324 BFD-like [2Fe-2S] binding domain ABBFA_RS11055 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS11065 PF01266 FAD dependent oxidoreductase ABBFA_RS11070 PF05544 Proline racemase ABBFA_RS11075 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS11085 PF00701 Dihydrodipicolinate synthetase family ABBFA_RS11100 PF09278 MerR, DNA binding ABBFA_RS11100 PF00376 MerR family regulatory protein ABBFA_RS11110 PF02677 Epoxyqueuosine reductase QueH ABBFA_RS11125 PF07690 Major Facilitator Superfamily ABBFA_RS11130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABBFA_RS11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS11140 PF03466 LysR substrate binding domain ABBFA_RS11160 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ABBFA_RS11165 PF06812 ImpA, N-terminal, type VI secretion system ABBFA_RS11170 PF17871 AAA lid domain ABBFA_RS11170 PF10431 C-terminal, D2-small domain, of ClpB protein ABBFA_RS11170 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS11170 PF07724 AAA domain (Cdc48 subfamily) ABBFA_RS11180 PF01389 OmpA-like transmembrane domain ABBFA_RS11180 PF00691 OmpA family ABBFA_RS11190 PF06761 Intracellular multiplication and human macrophage-killing ABBFA_RS11190 PF14331 ImcF-related N-terminal domain ABBFA_RS11190 PF06744 Type VI secretion protein IcmF C-terminal ABBFA_RS11205 PF05947 Type VI secretion system, TssF ABBFA_RS11220 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ABBFA_RS11250 PF00005 ABC transporter ABBFA_RS11255 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABBFA_RS11260 PF01425 Amidase ABBFA_RS11265 PF08753 NikR C terminal nickel binding domain ABBFA_RS11265 PF01402 Ribbon-helix-helix protein, copG family ABBFA_RS11275 PF01638 HxlR-like helix-turn-helix ABBFA_RS11280 PF02525 Flavodoxin-like fold ABBFA_RS11285 PF02785 Biotin carboxylase C-terminal domain ABBFA_RS11285 PF00289 Biotin carboxylase, N-terminal domain ABBFA_RS11285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABBFA_RS11300 PF13823 Alcohol dehydrogenase GroES-associated ABBFA_RS11300 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS11300 PF00107 Zinc-binding dehydrogenase ABBFA_RS11310 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS11340 PF00654 Voltage gated chloride channel ABBFA_RS11345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABBFA_RS11345 PF02785 Biotin carboxylase C-terminal domain ABBFA_RS11345 PF00364 Biotin-requiring enzyme ABBFA_RS11345 PF00289 Biotin carboxylase, N-terminal domain ABBFA_RS11355 PF07286 Protein of unknown function (DUF1445) ABBFA_RS11360 PF03746 LamB/YcsF family ABBFA_RS11365 PF01566 Natural resistance-associated macrophage protein ABBFA_RS11370 PF03466 LysR substrate binding domain ABBFA_RS11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS11390 PF03527 RHS protein ABBFA_RS11390 PF05593 RHS Repeat ABBFA_RS11405 PF05593 RHS Repeat ABBFA_RS11405 PF03527 RHS protein ABBFA_RS11410 PF13296 Putative type VI secretion system Rhs element Vgr ABBFA_RS11410 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABBFA_RS11410 PF04717 Type VI secretion system, phage-baseplate injector ABBFA_RS11440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABBFA_RS11440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABBFA_RS11460 PF07690 Major Facilitator Superfamily ABBFA_RS11475 PF03279 Bacterial lipid A biosynthesis acyltransferase ABBFA_RS11485 PF00892 EamA-like transporter family ABBFA_RS11490 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS11495 PF05192 MutS domain III ABBFA_RS11495 PF05190 MutS family domain IV ABBFA_RS11495 PF00488 MutS domain V ABBFA_RS11495 PF01624 MutS domain I ABBFA_RS11495 PF05188 MutS domain II ABBFA_RS11505 PF00037 4Fe-4S binding domain ABBFA_RS11505 PF11953 Domain of unknown function (DUF3470) ABBFA_RS11515 PF01596 O-methyltransferase ABBFA_RS11525 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS11530 PF01205 Uncharacterized protein family UPF0029 ABBFA_RS11540 PF03412 Peptidase C39 family ABBFA_RS11540 PF00005 ABC transporter ABBFA_RS11540 PF00664 ABC transporter transmembrane region ABBFA_RS11545 PF02321 Outer membrane efflux protein ABBFA_RS11550 PF00005 ABC transporter ABBFA_RS11550 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABBFA_RS11555 PF03968 OstA-like protein ABBFA_RS11570 PF00571 CBS domain ABBFA_RS11570 PF01380 SIS domain ABBFA_RS11575 PF01406 tRNA synthetases class I (C) catalytic domain ABBFA_RS11575 PF09190 DALR domain ABBFA_RS11625 PF13229 Right handed beta helix region ABBFA_RS11625 PF12708 Pectate lyase superfamily protein ABBFA_RS11645 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) ABBFA_RS11665 PF06381 Protein of unknown function (DUF1073) ABBFA_RS11740 PF01638 HxlR-like helix-turn-helix ABBFA_RS11745 PF07690 Major Facilitator Superfamily ABBFA_RS11775 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABBFA_RS11775 PF03807 NADP oxidoreductase coenzyme F420-dependent ABBFA_RS11785 PF00313 'Cold-shock' DNA-binding domain ABBFA_RS11790 PF01810 LysE type translocator ABBFA_RS11825 PF13742 OB-fold nucleic acid binding domain ABBFA_RS11825 PF02601 Exonuclease VII, large subunit ABBFA_RS11865 PF00376 MerR family regulatory protein ABBFA_RS11865 PF09278 MerR, DNA binding ABBFA_RS11870 PF00403 Heavy-metal-associated domain ABBFA_RS11880 PF03466 LysR substrate binding domain ABBFA_RS11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS11885 PF00355 Rieske [2Fe-2S] domain ABBFA_RS11885 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABBFA_RS11890 PF00866 Ring hydroxylating beta subunit ABBFA_RS11895 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS11895 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS11895 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS11900 PF00106 short chain dehydrogenase ABBFA_RS11905 PF03594 Benzoate membrane transport protein ABBFA_RS11910 PF07690 Major Facilitator Superfamily ABBFA_RS11920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABBFA_RS11920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABBFA_RS11925 PF00271 Helicase conserved C-terminal domain ABBFA_RS11925 PF04408 Helicase associated domain (HA2) ABBFA_RS11925 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABBFA_RS11925 PF11898 Domain of unknown function (DUF3418) ABBFA_RS11925 PF00270 DEAD/DEAH box helicase ABBFA_RS11930 PF00578 AhpC/TSA family ABBFA_RS11930 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABBFA_RS11950 PF13192 Thioredoxin domain ABBFA_RS11950 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS11960 PF00043 Glutathione S-transferase, C-terminal domain ABBFA_RS11960 PF02798 Glutathione S-transferase, N-terminal domain ABBFA_RS11970 PF02390 Putative methyltransferase ABBFA_RS11975 PF13417 Glutathione S-transferase, N-terminal domain ABBFA_RS11975 PF00043 Glutathione S-transferase, C-terminal domain ABBFA_RS11985 PF00691 OmpA family ABBFA_RS11985 PF13488 Glycine zipper ABBFA_RS11990 PF01979 Amidohydrolase family ABBFA_RS11995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABBFA_RS11995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABBFA_RS12005 PF10672 S-adenosylmethionine-dependent methyltransferase ABBFA_RS12005 PF02926 THUMP domain ABBFA_RS12005 PF01170 Putative RNA methylase family UPF0020 ABBFA_RS12020 PF10431 C-terminal, D2-small domain, of ClpB protein ABBFA_RS12020 PF02861 Clp amino terminal domain, pathogenicity island component ABBFA_RS12020 PF17871 AAA lid domain ABBFA_RS12020 PF07724 AAA domain (Cdc48 subfamily) ABBFA_RS12020 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS12035 PF02566 OsmC-like protein ABBFA_RS12040 PF13545 Crp-like helix-turn-helix domain ABBFA_RS12040 PF00027 Cyclic nucleotide-binding domain ABBFA_RS12045 PF00248 Aldo/keto reductase family ABBFA_RS12060 PF00709 Adenylosuccinate synthetase ABBFA_RS12065 PF13393 Histidyl-tRNA synthetase ABBFA_RS12070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABBFA_RS12070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABBFA_RS12075 PF02272 DHHA1 domain ABBFA_RS12075 PF01411 tRNA synthetases class II (A) ABBFA_RS12075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABBFA_RS12080 PF13840 ACT domain ABBFA_RS12080 PF01842 ACT domain ABBFA_RS12080 PF00696 Amino acid kinase family ABBFA_RS12085 PF02599 Global regulator protein family ABBFA_RS12090 PF01351 Ribonuclease HII ABBFA_RS12100 PF01292 Prokaryotic cytochrome b561 ABBFA_RS12105 PF00962 Adenosine/AMP deaminase ABBFA_RS12110 PF00860 Permease family ABBFA_RS12120 PF00743 Flavin-binding monooxygenase-like ABBFA_RS12125 PF00106 short chain dehydrogenase ABBFA_RS12135 PF17954 Quercetinase C-terminal cupin domain ABBFA_RS12135 PF02678 Pirin ABBFA_RS12140 PF17932 Tetracyclin repressor-like, C-terminal domain ABBFA_RS12140 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS12150 PF00106 short chain dehydrogenase ABBFA_RS12155 PF00743 Flavin-binding monooxygenase-like ABBFA_RS12160 PF04072 Leucine carboxyl methyltransferase ABBFA_RS12165 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABBFA_RS12165 PF12833 Helix-turn-helix domain ABBFA_RS12170 PF00743 Flavin-binding monooxygenase-like ABBFA_RS12175 PF00106 short chain dehydrogenase ABBFA_RS12180 PF07859 alpha/beta hydrolase fold ABBFA_RS12185 PF05199 GMC oxidoreductase ABBFA_RS12190 PF03573 outer membrane porin, OprD family ABBFA_RS12195 PF07690 Major Facilitator Superfamily ABBFA_RS12200 PF00355 Rieske [2Fe-2S] domain ABBFA_RS12205 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS12205 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS12220 PF07690 Major Facilitator Superfamily ABBFA_RS12225 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS12230 PF00171 Aldehyde dehydrogenase family ABBFA_RS12240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS12240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS12240 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS12245 PF03573 outer membrane porin, OprD family ABBFA_RS12260 PF07519 Tannase and feruloyl esterase ABBFA_RS12265 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS12265 PF07729 FCD domain ABBFA_RS12270 PF00171 Aldehyde dehydrogenase family ABBFA_RS12275 PF00701 Dihydrodipicolinate synthetase family ABBFA_RS12280 PF13378 Enolase C-terminal domain-like ABBFA_RS12285 PF07690 Major Facilitator Superfamily ABBFA_RS12290 PF08666 SAF domain ABBFA_RS12290 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABBFA_RS12295 PF00892 EamA-like transporter family ABBFA_RS12300 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABBFA_RS12300 PF12833 Helix-turn-helix domain ABBFA_RS12305 PF00171 Aldehyde dehydrogenase family ABBFA_RS12325 PF00324 Amino acid permease ABBFA_RS12330 PF04958 Arginine N-succinyltransferase beta subunit ABBFA_RS12335 PF00202 Aminotransferase class-III ABBFA_RS12345 PF00171 Aldehyde dehydrogenase family ABBFA_RS12355 PF07729 FCD domain ABBFA_RS12355 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS12365 PF00324 Amino acid permease ABBFA_RS12370 PF01266 FAD dependent oxidoreductase ABBFA_RS12375 PF00324 Amino acid permease ABBFA_RS12415 PF05593 RHS Repeat ABBFA_RS12415 PF03527 RHS protein ABBFA_RS12420 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABBFA_RS12420 PF04717 Type VI secretion system, phage-baseplate injector ABBFA_RS12420 PF13296 Putative type VI secretion system Rhs element Vgr ABBFA_RS12440 PF03180 NLPA lipoprotein ABBFA_RS12450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABBFA_RS12450 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS12455 PF00764 Arginosuccinate synthase ABBFA_RS12460 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS12460 PF00360 Phytochrome region ABBFA_RS12460 PF00563 EAL domain ABBFA_RS12460 PF01590 GAF domain ABBFA_RS12465 PF01979 Amidohydrolase family ABBFA_RS12470 PF00929 Exonuclease ABBFA_RS12480 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS12480 PF00593 TonB dependent receptor ABBFA_RS12520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABBFA_RS12520 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS12525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABBFA_RS12525 PF00005 ABC transporter ABBFA_RS12530 PF12911 N-terminal TM domain of oligopeptide transport permease C ABBFA_RS12530 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS12535 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS12540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABBFA_RS12545 PF01476 LysM domain ABBFA_RS12545 PF01476 LysM domain ABBFA_RS12545 PF01464 Transglycosylase SLT domain ABBFA_RS12545 PF01464 Transglycosylase SLT domain ABBFA_RS12550 PF00929 Exonuclease ABBFA_RS12560 PF00293 NUDIX domain ABBFA_RS12560 PF09297 NADH pyrophosphatase zinc ribbon domain ABBFA_RS12570 PF04972 BON domain ABBFA_RS12575 PF02021 Uncharacterised protein family UPF0102 ABBFA_RS12580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABBFA_RS12590 PF03466 LysR substrate binding domain ABBFA_RS12590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS12595 PF01810 LysE type translocator ABBFA_RS12605 PF13411 MerR HTH family regulatory protein ABBFA_RS12615 PF01494 FAD binding domain ABBFA_RS12620 PF01494 FAD binding domain ABBFA_RS12625 PF00557 Metallopeptidase family M24 ABBFA_RS12625 PF05195 Aminopeptidase P, N-terminal domain ABBFA_RS12660 PF00313 'Cold-shock' DNA-binding domain ABBFA_RS12735 PF08525 Opacity-associated protein A N-terminal motif ABBFA_RS12735 PF01551 Peptidase family M23 ABBFA_RS12735 PF01476 LysM domain ABBFA_RS12915 PF01555 DNA methylase ABBFA_RS12940 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS13015 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABBFA_RS13025 PF00004 ATPase family associated with various cellular activities (AAA) ABBFA_RS13025 PF05362 Lon protease (S16) C-terminal proteolytic domain ABBFA_RS13025 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABBFA_RS13030 PF02590 Predicted SPOUT methyltransferase ABBFA_RS13045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABBFA_RS13045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABBFA_RS13050 PF04060 Putative Fe-S cluster ABBFA_RS13055 PF00633 Helix-hairpin-helix motif ABBFA_RS13055 PF10576 Iron-sulfur binding domain of endonuclease III ABBFA_RS13055 PF00730 HhH-GPD superfamily base excision DNA repair protein ABBFA_RS13060 PF05191 Adenylate kinase, active site lid ABBFA_RS13075 PF03717 Penicillin-binding Protein dimerisation domain ABBFA_RS13075 PF00905 Penicillin binding protein transpeptidase domain ABBFA_RS13090 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABBFA_RS13095 PF01730 UreF ABBFA_RS13100 PF02814 UreE urease accessory protein, N-terminal domain ABBFA_RS13100 PF05194 UreE urease accessory protein, C-terminal domain ABBFA_RS13105 PF00449 Urease alpha-subunit, N-terminal domain ABBFA_RS13105 PF01979 Amidohydrolase family ABBFA_RS13110 PF00699 Urease beta subunit ABBFA_RS13115 PF00547 Urease, gamma subunit ABBFA_RS13120 PF01774 UreD urease accessory protein ABBFA_RS13135 PF00463 Isocitrate lyase family ABBFA_RS13140 PF03466 LysR substrate binding domain ABBFA_RS13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS13145 PF01595 Cyclin M transmembrane N-terminal domain ABBFA_RS13145 PF03471 Transporter associated domain ABBFA_RS13145 PF00571 CBS domain ABBFA_RS13155 PF03600 Citrate transporter ABBFA_RS13170 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS13175 PF01507 Phosphoadenosine phosphosulfate reductase family ABBFA_RS13185 PF14052 Capsule assembly protein Wzi ABBFA_RS13190 PF01336 OB-fold nucleic acid binding domain ABBFA_RS13190 PF00152 tRNA synthetases class II (D, K and N) ABBFA_RS13205 PF00301 Rubredoxin ABBFA_RS13210 PF18113 Rubredoxin binding C-terminal domain ABBFA_RS13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS13215 PF00561 alpha/beta hydrolase fold ABBFA_RS13220 PF03466 LysR substrate binding domain ABBFA_RS13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS13235 PF13090 Polyphosphate kinase C-terminal domain 2 ABBFA_RS13235 PF13089 Polyphosphate kinase N-terminal domain ABBFA_RS13235 PF17941 Polyphosphate kinase C-terminal domain 1 ABBFA_RS13235 PF02503 Polyphosphate kinase middle domain ABBFA_RS13240 PF00912 Transglycosylase ABBFA_RS13245 PF01694 Rhomboid family ABBFA_RS13255 PF00005 ABC transporter ABBFA_RS13260 PF13472 GDSL-like Lipase/Acylhydrolase family ABBFA_RS13265 PF00484 Carbonic anhydrase ABBFA_RS13270 PF00561 alpha/beta hydrolase fold ABBFA_RS13280 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS13280 PF00593 TonB dependent receptor ABBFA_RS13285 PF01521 Iron-sulphur cluster biosynthesis ABBFA_RS13285 PF01106 NifU-like domain ABBFA_RS13295 PF00884 Sulfatase ABBFA_RS13300 PF03781 Sulfatase-modifying factor enzyme 1 ABBFA_RS13315 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS13320 PF01384 Phosphate transporter family ABBFA_RS13325 PF02310 B12 binding domain ABBFA_RS13325 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABBFA_RS13325 PF00809 Pterin binding enzyme ABBFA_RS13325 PF02607 B12 binding domain ABBFA_RS13325 PF02574 Homocysteine S-methyltransferase ABBFA_RS13330 PF02780 Transketolase, C-terminal domain ABBFA_RS13330 PF02779 Transketolase, pyrimidine binding domain ABBFA_RS13335 PF00456 Transketolase, thiamine diphosphate binding domain ABBFA_RS13340 PF07690 Major Facilitator Superfamily ABBFA_RS13350 PF03466 LysR substrate binding domain ABBFA_RS13350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS13365 PF01263 Aldose 1-epimerase ABBFA_RS13370 PF07690 Major Facilitator Superfamily ABBFA_RS13375 PF02311 AraC-like ligand binding domain ABBFA_RS13375 PF12833 Helix-turn-helix domain ABBFA_RS13380 PF04960 Glutaminase ABBFA_RS13385 PF01327 Polypeptide deformylase ABBFA_RS13390 PF07690 Major Facilitator Superfamily ABBFA_RS13400 PF00205 Thiamine pyrophosphate enzyme, central domain ABBFA_RS13400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABBFA_RS13400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABBFA_RS13405 PF00171 Aldehyde dehydrogenase family ABBFA_RS13410 PF03447 Homoserine dehydrogenase, NAD binding domain ABBFA_RS13410 PF01958 Domain of unknown function DUF108 ABBFA_RS13420 PF12697 Alpha/beta hydrolase family ABBFA_RS13430 PF07690 Major Facilitator Superfamily ABBFA_RS13435 PF14759 Reductase C-terminal ABBFA_RS13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS13440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABBFA_RS13450 PF00355 Rieske [2Fe-2S] domain ABBFA_RS13460 PF00355 Rieske [2Fe-2S] domain ABBFA_RS13465 PF09339 IclR helix-turn-helix domain ABBFA_RS13465 PF01614 Bacterial transcriptional regulator ABBFA_RS13480 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS13490 PF00535 Glycosyl transferase family 2 ABBFA_RS13495 PF01522 Polysaccharide deacetylase ABBFA_RS13495 PF14883 Hypothetical glycosyl hydrolase family 13 ABBFA_RS13500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABBFA_RS13505 PF07152 YaeQ protein ABBFA_RS13510 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS13515 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABBFA_RS13515 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABBFA_RS13525 PF03061 Thioesterase superfamily ABBFA_RS13535 PF02028 BCCT, betaine/carnitine/choline family transporter ABBFA_RS13540 PF02028 BCCT, betaine/carnitine/choline family transporter ABBFA_RS13545 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS13545 PF13977 BetI-type transcriptional repressor, C-terminal ABBFA_RS13550 PF00171 Aldehyde dehydrogenase family ABBFA_RS13555 PF05199 GMC oxidoreductase ABBFA_RS13555 PF00732 GMC oxidoreductase ABBFA_RS13560 PF06039 Malate:quinone oxidoreductase (Mqo) ABBFA_RS13570 PF02574 Homocysteine S-methyltransferase ABBFA_RS13575 PF13520 Amino acid permease ABBFA_RS13600 PF00701 Dihydrodipicolinate synthetase family ABBFA_RS13605 PF00083 Sugar (and other) transporter ABBFA_RS13625 PF01026 TatD related DNase ABBFA_RS13640 PF07693 KAP family P-loop domain ABBFA_RS13660 PF07690 Major Facilitator Superfamily ABBFA_RS13665 PF13533 Biotin-lipoyl like ABBFA_RS13670 PF03061 Thioesterase superfamily ABBFA_RS13675 PF00490 Delta-aminolevulinic acid dehydratase ABBFA_RS13680 PF01266 FAD dependent oxidoreductase ABBFA_RS13685 PF08338 Domain of unknown function (DUF1731) ABBFA_RS13685 PF01370 NAD dependent epimerase/dehydratase family ABBFA_RS13705 PF00149 Calcineurin-like phosphoesterase ABBFA_RS13705 PF12320 Type 5 capsule protein repressor C-terminal domain ABBFA_RS13715 PF01168 Alanine racemase, N-terminal domain ABBFA_RS13720 PF00437 Type II/IV secretion system protein ABBFA_RS13725 PF00437 Type II/IV secretion system protein ABBFA_RS13730 PF01475 Ferric uptake regulator family ABBFA_RS13735 PF04355 SmpA / OmlA family ABBFA_RS13740 PF03658 RnfH family Ubiquitin ABBFA_RS13755 PF01814 Hemerythrin HHE cation binding domain ABBFA_RS13760 PF13230 Glutamine amidotransferases class-II ABBFA_RS13770 PF00696 Amino acid kinase family ABBFA_RS13775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABBFA_RS13775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABBFA_RS13775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABBFA_RS13775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABBFA_RS13780 PF00692 dUTPase ABBFA_RS13785 PF13361 UvrD-like helicase C-terminal domain ABBFA_RS13785 PF00580 UvrD/REP helicase N-terminal domain ABBFA_RS13790 PF00691 OmpA family ABBFA_RS13790 PF13488 Glycine zipper ABBFA_RS13795 PF01553 Acyltransferase ABBFA_RS13805 PF03775 Septum formation inhibitor MinC, C-terminal domain ABBFA_RS13810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABBFA_RS13815 PF03776 Septum formation topological specificity factor MinE ABBFA_RS13825 PF01810 LysE type translocator ABBFA_RS13830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABBFA_RS13830 PF17854 FtsK alpha domain ABBFA_RS13830 PF01580 FtsK/SpoIIIE family ABBFA_RS13830 PF09397 Ftsk gamma domain ABBFA_RS13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS13840 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABBFA_RS13845 PF04377 Arginine-tRNA-protein transferase, C terminus ABBFA_RS13845 PF04376 Arginine-tRNA-protein transferase, N terminus ABBFA_RS13850 PF00583 Acetyltransferase (GNAT) family ABBFA_RS13865 PF03143 Elongation factor Tu C-terminal domain ABBFA_RS13865 PF03144 Elongation factor Tu domain 2 ABBFA_RS13865 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS13870 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS13870 PF03764 Elongation factor G, domain IV ABBFA_RS13870 PF14492 Elongation Factor G, domain II ABBFA_RS13870 PF00679 Elongation factor G C-terminus ABBFA_RS13870 PF03144 Elongation factor Tu domain 2 ABBFA_RS13875 PF00177 Ribosomal protein S7p/S5e ABBFA_RS13880 PF00164 Ribosomal protein S12/S23 ABBFA_RS13890 PF00109 Beta-ketoacyl synthase, N-terminal domain ABBFA_RS13890 PF02801 Beta-ketoacyl synthase, C-terminal domain ABBFA_RS13895 PF03653 Uncharacterised protein family (UPF0093) ABBFA_RS13900 PF05726 Pirin C-terminal cupin domain ABBFA_RS13900 PF02678 Pirin ABBFA_RS13910 PF00795 Carbon-nitrogen hydrolase ABBFA_RS13910 PF02540 NAD synthase ABBFA_RS13925 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS13925 PF00111 2Fe-2S iron-sulfur cluster binding domain ABBFA_RS13925 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS13930 PF00171 Aldehyde dehydrogenase family ABBFA_RS13935 PF00355 Rieske [2Fe-2S] domain ABBFA_RS13935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABBFA_RS13940 PF07859 alpha/beta hydrolase fold ABBFA_RS13945 PF02028 BCCT, betaine/carnitine/choline family transporter ABBFA_RS13950 PF00180 Isocitrate/isopropylmalate dehydrogenase ABBFA_RS13955 PF03466 LysR substrate binding domain ABBFA_RS13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS13975 PF00037 4Fe-4S binding domain ABBFA_RS13980 PF01467 Cytidylyltransferase-like ABBFA_RS13985 PF01668 SmpB protein ABBFA_RS13990 PF03358 NADPH-dependent FMN reductase ABBFA_RS13995 PF02578 Multi-copper polyphenol oxidoreductase laccase ABBFA_RS14000 PF00849 RNA pseudouridylate synthase ABBFA_RS14000 PF01479 S4 domain ABBFA_RS14005 PF13525 Outer membrane lipoprotein ABBFA_RS14010 PF01807 CHC2 zinc finger ABBFA_RS14010 PF08278 DNA primase DnaG DnaB-binding ABBFA_RS14010 PF10410 DnaB-helicase binding domain of primase ABBFA_RS14010 PF08275 DNA primase catalytic core, N-terminal domain ABBFA_RS14015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABBFA_RS14015 PF01488 Shikimate / quinate 5-dehydrogenase ABBFA_RS14015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABBFA_RS14025 PF03550 Outer membrane lipoprotein LolB ABBFA_RS14030 PF00288 GHMP kinases N terminal domain ABBFA_RS14030 PF08544 GHMP kinases C terminal ABBFA_RS14055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABBFA_RS14055 PF14572 Phosphoribosyl synthetase-associated domain ABBFA_RS14060 PF01386 Ribosomal L25p family ABBFA_RS14065 PF01195 Peptidyl-tRNA hydrolase ABBFA_RS14070 PF02261 Aspartate decarboxylase ABBFA_RS14085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABBFA_RS14095 PF03070 TENA/THI-4/PQQC family ABBFA_RS14095 PF02581 Thiamine monophosphate synthase ABBFA_RS14095 PF08543 Phosphomethylpyrimidine kinase ABBFA_RS14100 PF01476 LysM domain ABBFA_RS14100 PF04972 BON domain ABBFA_RS14105 PF00550 Phosphopantetheine attachment site ABBFA_RS14115 PF00698 Acyl transferase domain ABBFA_RS14120 PF01783 Ribosomal L32p protein family ABBFA_RS14125 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABBFA_RS14130 PF04315 Elongation factor P hydroxylase ABBFA_RS14135 PF01300 Telomere recombination ABBFA_RS14140 PF02616 Segregation and condensation protein ScpA ABBFA_RS14145 PF04079 Segregation and condensation complex subunit ScpB ABBFA_RS14150 PF00849 RNA pseudouridylate synthase ABBFA_RS14150 PF01479 S4 domain ABBFA_RS14165 PF00155 Aminotransferase class I and II ABBFA_RS14170 PF04055 Radical SAM superfamily ABBFA_RS14170 PF06968 Biotin and Thiamin Synthesis associated domain ABBFA_RS14170 PF00202 Aminotransferase class-III ABBFA_RS14175 PF12697 Alpha/beta hydrolase family ABBFA_RS14175 PF08241 Methyltransferase domain ABBFA_RS14180 PF02358 Trehalose-phosphatase ABBFA_RS14185 PF00982 Glycosyltransferase family 20 ABBFA_RS14190 PF07690 Major Facilitator Superfamily ABBFA_RS14195 PF00210 Ferritin-like domain ABBFA_RS14200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABBFA_RS14200 PF03120 NAD-dependent DNA ligase OB-fold domain ABBFA_RS14200 PF01653 NAD-dependent DNA ligase adenylation domain ABBFA_RS14200 PF00533 BRCA1 C Terminus (BRCT) domain ABBFA_RS14200 PF12826 Helix-hairpin-helix motif ABBFA_RS14210 PF06470 SMC proteins Flexible Hinge Domain ABBFA_RS14210 PF02463 RecF/RecN/SMC N terminal domain ABBFA_RS14220 PF01925 Sulfite exporter TauE/SafE ABBFA_RS14230 PF03309 Type III pantothenate kinase ABBFA_RS14235 PF00448 SRP54-type protein, GTPase domain ABBFA_RS14235 PF02881 SRP54-type protein, helical bundle domain ABBFA_RS14235 PF02978 Signal peptide binding domain ABBFA_RS14245 PF01207 Dihydrouridine synthase (Dus) ABBFA_RS14280 PF00692 dUTPase ABBFA_RS14295 PF01048 Phosphorylase superfamily ABBFA_RS14305 PF10609 NUBPL iron-transfer P-loop NTPase ABBFA_RS14315 PF01588 Putative tRNA binding domain ABBFA_RS14315 PF09334 tRNA synthetases class I (M) ABBFA_RS14340 PF13533 Biotin-lipoyl like ABBFA_RS14345 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS14360 PF05552 Conserved TM helix ABBFA_RS14375 PF00970 Oxidoreductase FAD-binding domain ABBFA_RS14375 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS14380 PF03466 LysR substrate binding domain ABBFA_RS14390 PF00313 'Cold-shock' DNA-binding domain ABBFA_RS14400 PF00361 Proton-conducting membrane transporter ABBFA_RS14405 PF00361 Proton-conducting membrane transporter ABBFA_RS14410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABBFA_RS14410 PF00361 Proton-conducting membrane transporter ABBFA_RS14415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABBFA_RS14420 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABBFA_RS14425 PF12838 4Fe-4S dicluster domain ABBFA_RS14430 PF00146 NADH dehydrogenase ABBFA_RS14435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABBFA_RS14435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABBFA_RS14435 PF00384 Molybdopterin oxidoreductase ABBFA_RS14440 PF10531 SLBB domain ABBFA_RS14440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABBFA_RS14440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABBFA_RS14450 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABBFA_RS14450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABBFA_RS14455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABBFA_RS14460 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABBFA_RS14465 PF17151 Periplasmic sensor domain ABBFA_RS14465 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS14475 PF00672 HAMP domain ABBFA_RS14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS14475 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS14480 PF00072 Response regulator receiver domain ABBFA_RS14480 PF00486 Transcriptional regulatory protein, C terminal ABBFA_RS14490 PF00317 Ribonucleotide reductase, all-alpha domain ABBFA_RS14490 PF02867 Ribonucleotide reductase, barrel domain ABBFA_RS14490 PF03477 ATP cone domain ABBFA_RS14500 PF00268 Ribonucleotide reductase, small chain ABBFA_RS14510 PF02567 Phenazine biosynthesis-like protein ABBFA_RS14540 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS14540 PF16295 Tetracyclin repressor-like, C-terminal domain ABBFA_RS14550 PF01613 Flavin reductase like domain ABBFA_RS14555 PF08267 Cobalamin-independent synthase, N-terminal domain ABBFA_RS14555 PF01717 Cobalamin-independent synthase, Catalytic domain ABBFA_RS14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS14565 PF03466 LysR substrate binding domain ABBFA_RS14570 PF01810 LysE type translocator ABBFA_RS14580 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABBFA_RS14580 PF12833 Helix-turn-helix domain ABBFA_RS14585 PF07687 Peptidase dimerisation domain ABBFA_RS14585 PF01546 Peptidase family M20/M25/M40 ABBFA_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS14595 PF03466 LysR substrate binding domain ABBFA_RS14605 PF07690 Major Facilitator Superfamily ABBFA_RS14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS14615 PF03466 LysR substrate binding domain ABBFA_RS14620 PF00890 FAD binding domain ABBFA_RS14620 PF14537 Cytochrome c3 ABBFA_RS14630 PF02515 CoA-transferase family III ABBFA_RS14635 PF07690 Major Facilitator Superfamily ABBFA_RS14640 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS14640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS14640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS14645 PF03466 LysR substrate binding domain ABBFA_RS14645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS14650 PF00107 Zinc-binding dehydrogenase ABBFA_RS14650 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS14655 PF00962 Adenosine/AMP deaminase ABBFA_RS14685 PF02445 Quinolinate synthetase A protein ABBFA_RS14690 PF01960 ArgJ family ABBFA_RS14695 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABBFA_RS14695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABBFA_RS14700 PF00893 Small Multidrug Resistance protein ABBFA_RS14710 PF05275 Copper resistance protein B precursor (CopB) ABBFA_RS14715 PF07732 Multicopper oxidase ABBFA_RS14715 PF00394 Multicopper oxidase ABBFA_RS14715 PF07731 Multicopper oxidase ABBFA_RS14730 PF00834 Ribulose-phosphate 3 epimerase family ABBFA_RS14740 PF00756 Putative esterase ABBFA_RS14750 PF04445 Putative SAM-dependent methyltransferase ABBFA_RS14755 PF00814 Glycoprotease family ABBFA_RS14760 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS14765 PF00293 NUDIX domain ABBFA_RS14805 PF04715 Anthranilate synthase component I, N terminal region ABBFA_RS14805 PF00425 chorismate binding enzyme ABBFA_RS14810 PF00155 Aminotransferase class I and II ABBFA_RS14815 PF00815 Histidinol dehydrogenase ABBFA_RS14820 PF01634 ATP phosphoribosyltransferase ABBFA_RS14825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABBFA_RS14830 PF01722 BolA-like protein ABBFA_RS14835 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABBFA_RS14840 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABBFA_RS14840 PF04552 Sigma-54, DNA binding domain ABBFA_RS14840 PF04963 Sigma-54 factor, core binding domain ABBFA_RS14885 PF00795 Carbon-nitrogen hydrolase ABBFA_RS14895 PF01047 MarR family ABBFA_RS14900 PF02566 OsmC-like protein ABBFA_RS14905 PF00437 Type II/IV secretion system protein ABBFA_RS14925 PF01612 3'-5' exonuclease ABBFA_RS14925 PF00476 DNA polymerase family A ABBFA_RS14925 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABBFA_RS14925 PF01367 5'-3' exonuclease, C-terminal SAM fold ABBFA_RS14930 PF02325 YGGT family ABBFA_RS14935 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABBFA_RS14935 PF03807 NADP oxidoreductase coenzyme F420-dependent ABBFA_RS14940 PF11734 TilS substrate C-terminal domain ABBFA_RS14940 PF09179 TilS substrate binding domain ABBFA_RS14940 PF01171 PP-loop family ABBFA_RS14945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABBFA_RS14950 PF02541 Ppx/GppA phosphatase family ABBFA_RS14955 PF00085 Thioredoxin ABBFA_RS14960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABBFA_RS14960 PF07498 Rho termination factor, N-terminal domain ABBFA_RS14960 PF07497 Rho termination factor, RNA-binding domain ABBFA_RS14975 PF00216 Bacterial DNA-binding protein ABBFA_RS14980 PF03484 tRNA synthetase B5 domain ABBFA_RS14980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABBFA_RS14980 PF03147 Ferredoxin-fold anticodon binding domain ABBFA_RS14980 PF01588 Putative tRNA binding domain ABBFA_RS14980 PF03483 B3/4 domain ABBFA_RS14985 PF01409 tRNA synthetases class II core domain (F) ABBFA_RS14985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABBFA_RS15000 PF00453 Ribosomal protein L20 ABBFA_RS15005 PF01632 Ribosomal protein L35 ABBFA_RS15010 PF07690 Major Facilitator Superfamily ABBFA_RS15015 PF09335 SNARE associated Golgi protein ABBFA_RS15020 PF00043 Glutathione S-transferase, C-terminal domain ABBFA_RS15020 PF02798 Glutathione S-transferase, N-terminal domain ABBFA_RS15025 PF05198 Translation initiation factor IF-3, N-terminal domain ABBFA_RS15025 PF00707 Translation initiation factor IF-3, C-terminal domain ABBFA_RS15030 PF03129 Anticodon binding domain ABBFA_RS15030 PF02824 TGS domain ABBFA_RS15030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABBFA_RS15030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABBFA_RS15035 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS15035 PF00501 AMP-binding enzyme ABBFA_RS15040 PF04751 Protein of unknown function (DUF615) ABBFA_RS15045 PF00381 PTS HPr component phosphorylation site ABBFA_RS15050 PF03668 P-loop ATPase protein family ABBFA_RS15055 PF02569 Pantoate-beta-alanine ligase ABBFA_RS15060 PF02548 Ketopantoate hydroxymethyltransferase ABBFA_RS15065 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABBFA_RS15070 PF12627 Probable RNA and SrmB- binding site of polymerase A ABBFA_RS15070 PF12626 Polymerase A arginine-rich C-terminus ABBFA_RS15070 PF01743 Poly A polymerase head domain ABBFA_RS15080 PF03819 MazG nucleotide pyrophosphohydrolase domain ABBFA_RS15090 PF02824 TGS domain ABBFA_RS15090 PF13291 ACT domain ABBFA_RS15090 PF04607 Region found in RelA / SpoT proteins ABBFA_RS15095 PF05958 tRNA (Uracil-5-)-methyltransferase ABBFA_RS15105 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS15110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABBFA_RS15110 PF00072 Response regulator receiver domain ABBFA_RS15110 PF01627 Hpt domain ABBFA_RS15110 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS15110 PF00672 HAMP domain ABBFA_RS15115 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS15120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABBFA_RS15120 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABBFA_RS15125 PF01261 Xylose isomerase-like TIM barrel ABBFA_RS15135 PF00106 short chain dehydrogenase ABBFA_RS15140 PF02233 NAD(P) transhydrogenase beta subunit ABBFA_RS15145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABBFA_RS15150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABBFA_RS15150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABBFA_RS15155 PF00892 EamA-like transporter family ABBFA_RS15165 PF07690 Major Facilitator Superfamily ABBFA_RS15170 PF01207 Dihydrouridine synthase (Dus) ABBFA_RS15180 PF03466 LysR substrate binding domain ABBFA_RS15180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS15190 PF00899 ThiF family ABBFA_RS15195 PF00330 Aconitase family (aconitate hydratase) ABBFA_RS15195 PF00694 Aconitase C-terminal domain ABBFA_RS15200 PF01026 TatD related DNase ABBFA_RS15215 PF03144 Elongation factor Tu domain 2 ABBFA_RS15215 PF16658 Class II release factor RF3, C-terminal domain ABBFA_RS15215 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS15240 PF00563 EAL domain ABBFA_RS15240 PF00990 Diguanylate cyclase, GGDEF domain ABBFA_RS15240 PF03707 Bacterial signalling protein N terminal repeat ABBFA_RS15245 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABBFA_RS15245 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABBFA_RS15250 PF10369 Small subunit of acetolactate synthase ABBFA_RS15255 PF00205 Thiamine pyrophosphate enzyme, central domain ABBFA_RS15255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABBFA_RS15255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABBFA_RS15265 PF08264 Anticodon-binding domain of tRNA ABBFA_RS15265 PF00133 tRNA synthetases class I (I, L, M and V) ABBFA_RS15265 PF13603 Leucyl-tRNA synthetase, Domain 2 ABBFA_RS15265 PF09334 tRNA synthetases class I (M) ABBFA_RS15280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABBFA_RS15285 PF00005 ABC transporter ABBFA_RS15285 PF02687 FtsX-like permease family ABBFA_RS15285 PF12704 MacB-like periplasmic core domain ABBFA_RS15290 PF02321 Outer membrane efflux protein ABBFA_RS15305 PF00929 Exonuclease ABBFA_RS15310 PF03193 RsgA GTPase ABBFA_RS15320 PF00462 Glutaredoxin ABBFA_RS15325 PF02556 Preprotein translocase subunit SecB ABBFA_RS15335 PF01926 50S ribosome-binding GTPase ABBFA_RS15335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABBFA_RS15340 PF13360 PQQ-like domain ABBFA_RS15350 PF03129 Anticodon binding domain ABBFA_RS15350 PF13393 Histidyl-tRNA synthetase ABBFA_RS15355 PF04551 GcpE protein ABBFA_RS15360 PF13464 Domain of unknown function (DUF4115) ABBFA_RS15370 PF04055 Radical SAM superfamily ABBFA_RS15375 PF00334 Nucleoside diphosphate kinase ABBFA_RS15380 PF04384 Iron-sulphur cluster assembly ABBFA_RS15385 PF01569 PAP2 superfamily ABBFA_RS15390 PF13439 Glycosyltransferase Family 4 ABBFA_RS15390 PF00534 Glycosyl transferases group 1 ABBFA_RS15395 PF00595 PDZ domain ABBFA_RS15395 PF11818 C-terminal domain of tail specific protease (DUF3340) ABBFA_RS15395 PF17804 Tail specific protease N-terminal domain ABBFA_RS15395 PF03572 Peptidase family S41 ABBFA_RS15400 PF00933 Glycosyl hydrolase family 3 N terminal domain ABBFA_RS15410 PF00561 alpha/beta hydrolase fold ABBFA_RS15415 PF00171 Aldehyde dehydrogenase family ABBFA_RS15420 PF00171 Aldehyde dehydrogenase family ABBFA_RS15425 PF01202 Shikimate kinase ABBFA_RS15430 PF02447 GntP family permease ABBFA_RS15435 PF01081 KDPG and KHG aldolase ABBFA_RS15440 PF00920 Dehydratase family ABBFA_RS15445 PF00871 Acetokinase family ABBFA_RS15450 PF01515 Phosphate acetyl/butaryl transferase ABBFA_RS15450 PF07085 DRTGG domain ABBFA_RS15455 PF05683 Fumarase C-terminus ABBFA_RS15455 PF05681 Fumarate hydratase (Fumerase) ABBFA_RS15470 PF10431 C-terminal, D2-small domain, of ClpB protein ABBFA_RS15470 PF06689 ClpX C4-type zinc finger ABBFA_RS15470 PF07724 AAA domain (Cdc48 subfamily) ABBFA_RS15475 PF00574 Clp protease ABBFA_RS15480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABBFA_RS15480 PF05698 Bacterial trigger factor protein (TF) C-terminus ABBFA_RS15480 PF05697 Bacterial trigger factor protein (TF) ABBFA_RS15485 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS15485 PF00593 TonB dependent receptor ABBFA_RS15490 PF18331 PKHD-type hydroxylase C-terminal domain ABBFA_RS15490 PF13640 2OG-Fe(II) oxygenase superfamily ABBFA_RS15495 PF00682 HMGL-like ABBFA_RS15495 PF08502 LeuA allosteric (dimerisation) domain ABBFA_RS15500 PF00561 alpha/beta hydrolase fold ABBFA_RS15505 PF07021 Methionine biosynthesis protein MetW ABBFA_RS15505 PF00561 alpha/beta hydrolase fold ABBFA_RS15515 PF01725 Ham1 family ABBFA_RS15525 PF02416 mttA/Hcf106 family ABBFA_RS15530 PF02416 mttA/Hcf106 family ABBFA_RS15535 PF00902 Sec-independent protein translocase protein (TatC) ABBFA_RS15555 PF01790 Prolipoprotein diacylglyceryl transferase ABBFA_RS15570 PF00303 Thymidylate synthase ABBFA_RS15575 PF00186 Dihydrofolate reductase ABBFA_RS15585 PF01625 Peptide methionine sulfoxide reductase ABBFA_RS15595 PF01618 MotA/TolQ/ExbB proton channel family ABBFA_RS15605 PF00551 Formyl transferase ABBFA_RS15605 PF01842 ACT domain ABBFA_RS15615 PF00171 Aldehyde dehydrogenase family ABBFA_RS15620 PF00830 Ribosomal L28 family ABBFA_RS15625 PF00471 Ribosomal protein L33 ABBFA_RS15630 PF00999 Sodium/hydrogen exchanger family ABBFA_RS15630 PF02254 TrkA-N domain ABBFA_RS15650 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABBFA_RS15655 PF13361 UvrD-like helicase C-terminal domain ABBFA_RS15655 PF00580 UvrD/REP helicase N-terminal domain ABBFA_RS15670 PF01396 Topoisomerase DNA binding C4 zinc finger ABBFA_RS15670 PF01751 Toprim domain ABBFA_RS15670 PF01131 DNA topoisomerase ABBFA_RS15670 PF08272 Topoisomerase I zinc-ribbon-like ABBFA_RS15680 PF01638 HxlR-like helix-turn-helix ABBFA_RS15685 PF00107 Zinc-binding dehydrogenase ABBFA_RS15685 PF08240 Alcohol dehydrogenase GroES-like domain ABBFA_RS15690 PF04102 SlyX ABBFA_RS15695 PF12848 ABC transporter ABBFA_RS15695 PF16326 ABC transporter C-terminal domain ABBFA_RS15695 PF00005 ABC transporter ABBFA_RS15700 PF01810 LysE type translocator ABBFA_RS15705 PF03279 Bacterial lipid A biosynthesis acyltransferase ABBFA_RS15715 PF00375 Sodium:dicarboxylate symporter family ABBFA_RS15725 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABBFA_RS15725 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABBFA_RS15745 PF01416 tRNA pseudouridine synthase ABBFA_RS15755 PF01176 Translation initiation factor 1A / IF-1 ABBFA_RS15770 PF00180 Isocitrate/isopropylmalate dehydrogenase ABBFA_RS15780 PF00694 Aconitase C-terminal domain ABBFA_RS15785 PF00330 Aconitase family (aconitate hydratase) ABBFA_RS15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS15795 PF03466 LysR substrate binding domain ABBFA_RS15805 PF00293 NUDIX domain ABBFA_RS15810 PF01590 GAF domain ABBFA_RS15810 PF02896 PEP-utilising enzyme, TIM barrel domain ABBFA_RS15810 PF00391 PEP-utilising enzyme, mobile domain ABBFA_RS15810 PF05524 PEP-utilising enzyme, N-terminal ABBFA_RS15815 PF00141 Peroxidase ABBFA_RS15820 PF12706 Beta-lactamase superfamily domain ABBFA_RS15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS15825 PF03466 LysR substrate binding domain ABBFA_RS15835 PF02798 Glutathione S-transferase, N-terminal domain ABBFA_RS15840 PF13280 WYL domain ABBFA_RS15840 PF08279 HTH domain ABBFA_RS15845 PF13419 Haloacid dehalogenase-like hydrolase ABBFA_RS15850 PF01479 S4 domain ABBFA_RS15850 PF00849 RNA pseudouridylate synthase ABBFA_RS15860 PF00575 S1 RNA binding domain ABBFA_RS15860 PF10150 Ribonuclease E/G family ABBFA_RS15860 PF12111 Polyribonucleotide phosphorylase C terminal ABBFA_RS15865 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS15865 PF00501 AMP-binding enzyme ABBFA_RS15880 PF03466 LysR substrate binding domain ABBFA_RS15880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABBFA_RS15885 PF00106 short chain dehydrogenase ABBFA_RS15890 PF06969 HemN C-terminal domain ABBFA_RS15890 PF04055 Radical SAM superfamily ABBFA_RS15900 PF01554 MatE ABBFA_RS15905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS15905 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS15905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS15910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS15910 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS15915 PF03109 ABC1 family ABBFA_RS15920 PF01197 Ribosomal protein L31 ABBFA_RS15930 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABBFA_RS15940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABBFA_RS15940 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABBFA_RS15940 PF13247 4Fe-4S dicluster domain ABBFA_RS15950 PF03884 DNA gyrase inhibitor YacG ABBFA_RS15955 PF00753 Metallo-beta-lactamase superfamily ABBFA_RS15960 PF00762 Ferrochelatase ABBFA_RS15970 PF01177 Asp/Glu/Hydantoin racemase ABBFA_RS15990 PF01206 Sulfurtransferase TusA ABBFA_RS15995 PF03471 Transporter associated domain ABBFA_RS15995 PF00571 CBS domain ABBFA_RS16000 PF00795 Carbon-nitrogen hydrolase ABBFA_RS16005 PF01588 Putative tRNA binding domain ABBFA_RS16015 PF07963 Prokaryotic N-terminal methylation motif ABBFA_RS16015 PF08334 Type II secretion system (T2SS), protein G ABBFA_RS16020 PF00482 Type II secretion system (T2SS), protein F ABBFA_RS16025 PF00271 Helicase conserved C-terminal domain ABBFA_RS16025 PF17764 3′ DNA-binding domain (3′BD) ABBFA_RS16025 PF18074 Primosomal protein N C-terminal domain ABBFA_RS16025 PF00270 DEAD/DEAH box helicase ABBFA_RS16025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABBFA_RS16030 PF02254 TrkA-N domain ABBFA_RS16030 PF00999 Sodium/hydrogen exchanger family ABBFA_RS16035 PF01430 Hsp33 protein ABBFA_RS16045 PF00226 DnaJ domain ABBFA_RS16045 PF01556 DnaJ C terminal domain ABBFA_RS16055 PF01544 CorA-like Mg2+ transporter protein ABBFA_RS16060 PF01138 3' exoribonuclease family, domain 1 ABBFA_RS16060 PF00013 KH domain ABBFA_RS16060 PF03725 3' exoribonuclease family, domain 2 ABBFA_RS16060 PF00575 S1 RNA binding domain ABBFA_RS16060 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABBFA_RS16065 PF00312 Ribosomal protein S15 ABBFA_RS16070 PF00144 Beta-lactamase ABBFA_RS16075 PF13538 UvrD-like helicase C-terminal domain ABBFA_RS16080 PF13361 UvrD-like helicase C-terminal domain ABBFA_RS16080 PF00580 UvrD/REP helicase N-terminal domain ABBFA_RS16080 PF12705 PD-(D/E)XK nuclease superfamily ABBFA_RS16085 PF17946 RecC C-terminal domain ABBFA_RS16095 PF03976 Polyphosphate kinase 2 (PPK2) ABBFA_RS16105 PF01209 ubiE/COQ5 methyltransferase family ABBFA_RS16115 PF03109 ABC1 family ABBFA_RS16125 PF01502 Phosphoribosyl-AMP cyclohydrolase ABBFA_RS16140 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABBFA_RS16140 PF00361 Proton-conducting membrane transporter ABBFA_RS16140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABBFA_RS16140 PF13244 Domain of unknown function (DUF4040) ABBFA_RS16145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABBFA_RS16150 PF00361 Proton-conducting membrane transporter ABBFA_RS16155 PF01899 Na+/H+ ion antiporter subunit ABBFA_RS16160 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABBFA_RS16165 PF03334 Na+/H+ antiporter subunit ABBFA_RS16170 PF02033 Ribosome-binding factor A ABBFA_RS16175 PF11987 Translation-initiation factor 2 ABBFA_RS16175 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS16175 PF04760 Translation initiation factor IF-2, N-terminal region ABBFA_RS16175 PF08364 Bacterial translation initiation factor IF-2 associated region ABBFA_RS16180 PF13184 NusA-like KH domain ABBFA_RS16180 PF08529 NusA N-terminal domain ABBFA_RS16180 PF00575 S1 RNA binding domain ABBFA_RS16185 PF02576 RimP N-terminal domain ABBFA_RS16185 PF17384 RimP C-terminal SH3 domain ABBFA_RS16205 PF03840 Preprotein translocase SecG subunit ABBFA_RS16210 PF00121 Triosephosphate isomerase ABBFA_RS16215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABBFA_RS16215 PF00437 Type II/IV secretion system protein ABBFA_RS16220 PF00482 Type II secretion system (T2SS), protein F ABBFA_RS16225 PF06750 Bacterial Peptidase A24 N-terminal domain ABBFA_RS16225 PF01478 Type IV leader peptidase family ABBFA_RS16230 PF01121 Dephospho-CoA kinase ABBFA_RS16240 PF00588 SpoU rRNA Methylase family ABBFA_RS16240 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABBFA_RS16245 PF06865 Pyrimidine/purine nucleoside phosphorylase ABBFA_RS16255 PF02463 RecF/RecN/SMC N terminal domain ABBFA_RS16260 PF02622 Uncharacterized ACR, COG1678 ABBFA_RS16265 PF03652 Holliday junction resolvase ABBFA_RS16270 PF13533 Biotin-lipoyl like ABBFA_RS16295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABBFA_RS16295 PF12833 Helix-turn-helix domain ABBFA_RS16295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABBFA_RS16295 PF02805 Metal binding domain of Ada ABBFA_RS16300 PF01066 CDP-alcohol phosphatidyltransferase ABBFA_RS16310 PF01541 GIY-YIG catalytic domain ABBFA_RS16310 PF02151 UvrB/uvrC motif ABBFA_RS16310 PF08459 UvrC Helix-hairpin-helix N-terminal ABBFA_RS16330 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS16330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABBFA_RS16330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABBFA_RS16335 PF00108 Thiolase, N-terminal domain ABBFA_RS16335 PF02803 Thiolase, C-terminal domain ABBFA_RS16350 PF09278 MerR, DNA binding ABBFA_RS16350 PF00376 MerR family regulatory protein ABBFA_RS16360 PF01323 DSBA-like thioredoxin domain ABBFA_RS16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS16375 PF00183 Hsp90 protein ABBFA_RS16390 PF03553 Na+/H+ antiporter family ABBFA_RS16390 PF13726 Na+-H+ antiporter family ABBFA_RS16415 PF04983 RNA polymerase Rpb1, domain 3 ABBFA_RS16415 PF05000 RNA polymerase Rpb1, domain 4 ABBFA_RS16415 PF00623 RNA polymerase Rpb1, domain 2 ABBFA_RS16415 PF04997 RNA polymerase Rpb1, domain 1 ABBFA_RS16415 PF04998 RNA polymerase Rpb1, domain 5 ABBFA_RS16420 PF10385 RNA polymerase beta subunit external 1 domain ABBFA_RS16420 PF04563 RNA polymerase beta subunit ABBFA_RS16420 PF04565 RNA polymerase Rpb2, domain 3 ABBFA_RS16420 PF04561 RNA polymerase Rpb2, domain 2 ABBFA_RS16420 PF04560 RNA polymerase Rpb2, domain 7 ABBFA_RS16420 PF00562 RNA polymerase Rpb2, domain 6 ABBFA_RS16425 PF16320 Ribosomal protein L7/L12 dimerisation domain ABBFA_RS16425 PF00542 Ribosomal protein L7/L12 C-terminal domain ABBFA_RS16430 PF00466 Ribosomal protein L10 ABBFA_RS16435 PF00687 Ribosomal protein L1p/L10e family ABBFA_RS16440 PF03946 Ribosomal protein L11, N-terminal domain ABBFA_RS16440 PF00298 Ribosomal protein L11, RNA binding domain ABBFA_RS16445 PF00467 KOW motif ABBFA_RS16445 PF02357 Transcription termination factor nusG ABBFA_RS16450 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABBFA_RS16460 PF00009 Elongation factor Tu GTP binding domain ABBFA_RS16460 PF03144 Elongation factor Tu domain 2 ABBFA_RS16460 PF03143 Elongation factor Tu C-terminal domain ABBFA_RS16485 PF00425 chorismate binding enzyme ABBFA_RS16485 PF04715 Anthranilate synthase component I, N terminal region ABBFA_RS16490 PF13419 Haloacid dehalogenase-like hydrolase ABBFA_RS16495 PF12401 Protein of unknown function (DUF2662) ABBFA_RS16495 PF00498 FHA domain ABBFA_RS16500 PF00263 Bacterial type II and III secretion system protein ABBFA_RS16500 PF03958 Bacterial type II/III secretion system short domain ABBFA_RS16515 PF00816 H-NS histone family ABBFA_RS16540 PF03900 Porphobilinogen deaminase, C-terminal domain ABBFA_RS16540 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABBFA_RS16545 PF00072 Response regulator receiver domain ABBFA_RS16545 PF04397 LytTr DNA-binding domain ABBFA_RS16550 PF07694 5TMR of 5TMR-LYT ABBFA_RS16550 PF06580 Histidine kinase ABBFA_RS16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS16555 PF14698 Argininosuccinate lyase C-terminal ABBFA_RS16555 PF00206 Lyase ABBFA_RS16560 PF04362 Bacterial Fe(2+) trafficking ABBFA_RS16565 PF01895 PhoU domain ABBFA_RS16570 PF02321 Outer membrane efflux protein ABBFA_RS16575 PF00892 EamA-like transporter family ABBFA_RS16590 PF13667 ThiC-associated domain ABBFA_RS16590 PF01964 Radical SAM ThiC family ABBFA_RS16595 PF00293 NUDIX domain ABBFA_RS16600 PF00149 Calcineurin-like phosphoesterase ABBFA_RS16605 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABBFA_RS16610 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABBFA_RS16615 PF01098 Cell cycle protein ABBFA_RS16620 PF08245 Mur ligase middle domain ABBFA_RS16620 PF02875 Mur ligase family, glutamate ligase domain ABBFA_RS16630 PF07664 Ferrous iron transport protein B C terminus ABBFA_RS16630 PF02421 Ferrous iron transport protein B ABBFA_RS16630 PF07670 Nucleoside recognition ABBFA_RS16640 PF00589 Phage integrase family ABBFA_RS16640 PF02899 Phage integrase, N-terminal SAM-like domain ABBFA_RS16645 PF13098 Thioredoxin-like domain ABBFA_RS16645 PF10411 Disulfide bond isomerase protein N-terminus ABBFA_RS16650 PF00742 Homoserine dehydrogenase ABBFA_RS16650 PF03447 Homoserine dehydrogenase, NAD binding domain ABBFA_RS16650 PF01842 ACT domain ABBFA_RS16655 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS16660 PF00768 D-alanyl-D-alanine carboxypeptidase ABBFA_RS16665 PF00196 Bacterial regulatory proteins, luxR family ABBFA_RS16665 PF00072 Response regulator receiver domain ABBFA_RS16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABBFA_RS16670 PF00512 His Kinase A (phospho-acceptor) domain ABBFA_RS16675 PF02954 Bacterial regulatory protein, Fis family ABBFA_RS16675 PF00158 Sigma-54 interaction domain ABBFA_RS16675 PF00072 Response regulator receiver domain ABBFA_RS16680 PF00595 PDZ domain ABBFA_RS16680 PF03572 Peptidase family S41 ABBFA_RS16685 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABBFA_RS16685 PF01676 Metalloenzyme superfamily ABBFA_RS16690 PF03739 Lipopolysaccharide export system permease LptF/LptG ABBFA_RS16700 PF02789 Cytosol aminopeptidase family, N-terminal domain ABBFA_RS16700 PF00883 Cytosol aminopeptidase family, catalytic domain ABBFA_RS16720 PF00677 Lumazine binding domain ABBFA_RS16730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABBFA_RS16730 PF01872 RibD C-terminal domain ABBFA_RS16735 PF03477 ATP cone domain ABBFA_RS16740 PF00909 Ammonium Transporter Family ABBFA_RS16745 PF00543 Nitrogen regulatory protein P-II ABBFA_RS16755 PF01078 Magnesium chelatase, subunit ChlI ABBFA_RS16755 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABBFA_RS16760 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS16760 PF00155 Aminotransferase class I and II ABBFA_RS16770 PF00701 Dihydrodipicolinate synthetase family ABBFA_RS16780 PF03573 outer membrane porin, OprD family ABBFA_RS16785 PF00719 Inorganic pyrophosphatase ABBFA_RS16800 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS16800 PF00501 AMP-binding enzyme ABBFA_RS16805 PF00521 DNA gyrase/topoisomerase IV, subunit A ABBFA_RS16805 PF03989 DNA gyrase C-terminal domain, beta-propeller ABBFA_RS16810 PF07690 Major Facilitator Superfamily ABBFA_RS16815 PF03458 UPF0126 domain ABBFA_RS16820 PF02810 SEC-C motif ABBFA_RS16825 PF03471 Transporter associated domain ABBFA_RS16825 PF03741 Integral membrane protein TerC family ABBFA_RS16830 PF03641 Possible lysine decarboxylase ABBFA_RS16835 PF07690 Major Facilitator Superfamily ABBFA_RS16845 PF11798 IMS family HHH motif ABBFA_RS16845 PF00817 impB/mucB/samB family ABBFA_RS16845 PF11799 impB/mucB/samB family C-terminal domain ABBFA_RS16860 PF11842 Domain of unknown function (DUF3362) ABBFA_RS16860 PF04055 Radical SAM superfamily ABBFA_RS16860 PF08497 Radical SAM N-terminal ABBFA_RS16880 PF03358 NADPH-dependent FMN reductase ABBFA_RS16890 PF00291 Pyridoxal-phosphate dependent enzyme ABBFA_RS16925 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS16950 PF01327 Polypeptide deformylase ABBFA_RS16960 PF17782 DprA winged helix domain ABBFA_RS16960 PF02481 DNA recombination-mediator protein A ABBFA_RS16965 PF01300 Telomere recombination ABBFA_RS16970 PF00892 EamA-like transporter family ABBFA_RS16975 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS16980 PF07690 Major Facilitator Superfamily ABBFA_RS16990 PF00255 Glutathione peroxidase ABBFA_RS17000 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABBFA_RS17005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABBFA_RS17005 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABBFA_RS17010 PF00231 ATP synthase ABBFA_RS17015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABBFA_RS17015 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABBFA_RS17015 PF00306 ATP synthase alpha/beta chain, C terminal domain ABBFA_RS17020 PF00213 ATP synthase delta (OSCP) subunit ABBFA_RS17025 PF00430 ATP synthase B/B' CF(0) ABBFA_RS17030 PF00137 ATP synthase subunit C ABBFA_RS17035 PF00119 ATP synthase A chain ABBFA_RS17055 PF00005 ABC transporter ABBFA_RS17060 PF00950 ABC 3 transport family ABBFA_RS17065 PF01810 LysE type translocator ABBFA_RS17070 PF04261 Dyp-type peroxidase family ABBFA_RS17075 PF03949 Malic enzyme, NAD binding domain ABBFA_RS17075 PF00390 Malic enzyme, N-terminal domain ABBFA_RS17080 PF00750 tRNA synthetases class I (R) ABBFA_RS17080 PF05746 DALR anticodon binding domain ABBFA_RS17080 PF03485 Arginyl tRNA synthetase N terminal domain ABBFA_RS17100 PF05726 Pirin C-terminal cupin domain ABBFA_RS17100 PF02678 Pirin ABBFA_RS17110 PF03551 Transcriptional regulator PadR-like family ABBFA_RS17115 PF13427 Domain of unknown function (DUF4111) ABBFA_RS17115 PF01909 Nucleotidyltransferase domain ABBFA_RS17120 PF00958 GMP synthase C terminal domain ABBFA_RS17120 PF00117 Glutamine amidotransferase class-I ABBFA_RS17120 PF02540 NAD synthase ABBFA_RS17125 PF04286 Protein of unknown function (DUF445) ABBFA_RS17130 PF07681 DoxX ABBFA_RS17135 PF09335 SNARE associated Golgi protein ABBFA_RS17150 PF13614 AAA domain ABBFA_RS17160 PF01722 BolA-like protein ABBFA_RS17175 PF01648 4'-phosphopantetheinyl transferase superfamily ABBFA_RS17180 PF12697 Alpha/beta hydrolase family ABBFA_RS17195 PF00975 Thioesterase domain ABBFA_RS17195 PF00668 Condensation domain ABBFA_RS17195 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS17195 PF00550 Phosphopantetheine attachment site ABBFA_RS17195 PF00501 AMP-binding enzyme ABBFA_RS17200 PF00550 Phosphopantetheine attachment site ABBFA_RS17200 PF16197 Ketoacyl-synthetase C-terminal extension ABBFA_RS17200 PF00975 Thioesterase domain ABBFA_RS17200 PF08242 Methyltransferase domain ABBFA_RS17200 PF02801 Beta-ketoacyl synthase, C-terminal domain ABBFA_RS17200 PF00109 Beta-ketoacyl synthase, N-terminal domain ABBFA_RS17200 PF14765 Polyketide synthase dehydratase ABBFA_RS17205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS17205 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS17205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS17210 PF00501 AMP-binding enzyme ABBFA_RS17215 PF00196 Bacterial regulatory proteins, luxR family ABBFA_RS17215 PF03472 Autoinducer binding domain ABBFA_RS17225 PF00765 Autoinducer synthase ABBFA_RS17230 PF07690 Major Facilitator Superfamily ABBFA_RS17230 PF00083 Sugar (and other) transporter ABBFA_RS17235 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS17240 PF00378 Enoyl-CoA hydratase/isomerase ABBFA_RS17245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABBFA_RS17245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABBFA_RS17245 PF02770 Acyl-CoA dehydrogenase, middle domain ABBFA_RS17250 PF00501 AMP-binding enzyme ABBFA_RS17250 PF13193 AMP-binding enzyme C-terminal domain ABBFA_RS17255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABBFA_RS17255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABBFA_RS17260 PF00171 Aldehyde dehydrogenase family ABBFA_RS17270 PF00324 Amino acid permease ABBFA_RS17275 PF00324 Amino acid permease ABBFA_RS17280 PF01042 Endoribonuclease L-PSP ABBFA_RS17285 PF00842 Alanine racemase, C-terminal domain ABBFA_RS17285 PF01168 Alanine racemase, N-terminal domain ABBFA_RS17290 PF01266 FAD dependent oxidoreductase ABBFA_RS17295 PF01037 Lrp/AsnC ligand binding domain ABBFA_RS17305 PF07715 TonB-dependent Receptor Plug Domain ABBFA_RS17305 PF00593 TonB dependent receptor ABBFA_RS17320 PF00849 RNA pseudouridylate synthase ABBFA_RS17370 PF00694 Aconitase C-terminal domain ABBFA_RS17370 PF00330 Aconitase family (aconitate hydratase) ABBFA_RS17375 PF00285 Citrate synthase, C-terminal domain ABBFA_RS17385 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS17385 PF07729 FCD domain ABBFA_RS17390 PF00155 Aminotransferase class I and II ABBFA_RS17395 PF01565 FAD binding domain ABBFA_RS17395 PF09330 D-lactate dehydrogenase, membrane binding ABBFA_RS17400 PF01070 FMN-dependent dehydrogenase ABBFA_RS17405 PF07729 FCD domain ABBFA_RS17405 PF00392 Bacterial regulatory proteins, gntR family ABBFA_RS17410 PF02652 L-lactate permease ABBFA_RS17415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABBFA_RS17415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABBFA_RS17415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABBFA_RS17415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABBFA_RS17420 PF00342 Phosphoglucose isomerase ABBFA_RS17425 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABBFA_RS17425 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABBFA_RS17425 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABBFA_RS17430 PF00483 Nucleotidyl transferase ABBFA_RS17435 PF02719 Polysaccharide biosynthesis protein ABBFA_RS17440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABBFA_RS17445 PF00132 Bacterial transferase hexapeptide (six repeats) ABBFA_RS17445 PF17836 PglD N-terminal domain ABBFA_RS17445 PF14602 Hexapeptide repeat of succinyl-transferase ABBFA_RS17450 PF02397 Bacterial sugar transferase ABBFA_RS17455 PF00534 Glycosyl transferases group 1 ABBFA_RS17455 PF13477 Glycosyl transferase 4-like ABBFA_RS17460 PF00842 Alanine racemase, C-terminal domain ABBFA_RS17460 PF01168 Alanine racemase, N-terminal domain ABBFA_RS17460 PF01757 Acyltransferase family ABBFA_RS17470 PF13439 Glycosyltransferase Family 4 ABBFA_RS17470 PF00534 Glycosyl transferases group 1 ABBFA_RS17480 PF01370 NAD dependent epimerase/dehydratase family ABBFA_RS17485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABBFA_RS17485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABBFA_RS17485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABBFA_RS17490 PF02563 Polysaccharide biosynthesis/export protein ABBFA_RS17490 PF10531 SLBB domain ABBFA_RS17490 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABBFA_RS17495 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABBFA_RS17500 PF13807 G-rich domain on putative tyrosine kinase ABBFA_RS17500 PF13614 AAA domain ABBFA_RS17500 PF02706 Chain length determinant protein ABBFA_RS17505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABBFA_RS17505 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABBFA_RS17510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABBFA_RS17510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABBFA_RS17515 PF03023 Lipid II flippase MurJ ABBFA_RS17520 PF01510 N-acetylmuramoyl-L-alanine amidase ABBFA_RS17525 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABBFA_RS17525 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABBFA_RS17535 PF04185 Phosphoesterase family ABBFA_RS17535 PF05506 Domain of unknown function (DUF756) ABBFA_RS17540 PF03725 3' exoribonuclease family, domain 2 ABBFA_RS17540 PF01138 3' exoribonuclease family, domain 1 ABBFA_RS17545 PF00487 Fatty acid desaturase ABBFA_RS17550 PF00175 Oxidoreductase NAD-binding domain ABBFA_RS17555 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS17560 PF08360 QacR-like protein, C-terminal region ABBFA_RS17560 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS17565 PF01323 DSBA-like thioredoxin domain ABBFA_RS17575 PF13419 Haloacid dehalogenase-like hydrolase ABBFA_RS17580 PF00106 short chain dehydrogenase ABBFA_RS17595 PF00583 Acetyltransferase (GNAT) family ABBFA_RS17595 PF00696 Amino acid kinase family ABBFA_RS17600 PF09084 NMT1/THI5 like ABBFA_RS17605 PF09084 NMT1/THI5 like ABBFA_RS17610 PF00296 Luciferase-like monooxygenase ABBFA_RS17615 PF00528 Binding-protein-dependent transport system inner membrane component ABBFA_RS17620 PF00005 ABC transporter ABBFA_RS17625 PF08362 YcdC-like protein, C-terminal region ABBFA_RS17625 PF00440 Bacterial regulatory proteins, tetR family ABBFA_RS17630 PF01048 Phosphorylase superfamily ABBFA_RS17645 PF01687 Riboflavin kinase ABBFA_RS17645 PF06574 FAD synthetase ABBFA_RS17650 PF08264 Anticodon-binding domain of tRNA ABBFA_RS17650 PF06827 Zinc finger found in FPG and IleRS ABBFA_RS17650 PF00133 tRNA synthetases class I (I, L, M and V) ABBFA_RS17655 PF01252 Signal peptidase (SPase) II ABBFA_RS17660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABBFA_RS17700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABBFA_RS17705 PF07859 alpha/beta hydrolase fold ABBFA_RS17730 PF01025 GrpE ABBFA_RS17735 PF00012 Hsp70 protein ABBFA_RS17755 PF13406 Transglycosylase SLT domain ABBFA_RS17760 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABBFA_RS17760 PF02222 ATP-grasp domain ABBFA_RS17765 PF00731 AIR carboxylase ABBFA_RS17780 PF08245 Mur ligase middle domain ABBFA_RS17780 PF02875 Mur ligase family, glutamate ligase domain ABBFA_RS17780 PF01225 Mur ligase family, catalytic domain ABBFA_RS17790 PF01569 PAP2 superfamily ABBFA_RS17795 PF03741 Integral membrane protein TerC family ABBFA_RS17805 PF03738 Glutathionylspermidine synthase preATP-grasp ABBFA_RS17810 PF00355 Rieske [2Fe-2S] domain ABBFA_RS17815 PF01979 Amidohydrolase family ABBFA_RS17820 PF00156 Phosphoribosyl transferase domain ABBFA_RS17830 PF13098 Thioredoxin-like domain ABBFA_RS17830 PF10411 Disulfide bond isomerase protein N-terminus ABBFA_RS17835 PF01545 Cation efflux family ABBFA_RS17835 PF16916 Dimerisation domain of Zinc Transporter ABBFA_RS17840 PF02583 Metal-sensitive transcriptional repressor ABBFA_RS17845 PF01926 50S ribosome-binding GTPase ABBFA_RS17845 PF12631 MnmE helical domain ABBFA_RS17845 PF10396 GTP-binding protein TrmE N-terminus ABBFA_RS17850 PF14849 YidC periplasmic domain ABBFA_RS17850 PF02096 60Kd inner membrane protein ABBFA_RS17855 PF01809 Putative membrane protein insertion efficiency factor ABBFA_RS17860 PF00825 Ribonuclease P ABBFA_RS17865 PF00468 Ribosomal protein L34