locus-tag	class	description
ABBFA_RS00010	COG0592	DNA-directed DNA polymerase activity
ABBFA_RS00020	COG0187	DNA topoisomerase II activity
ABBFA_RS00030	COG0586	Pfam SNARE associated Golgi protein
ABBFA_RS00035	COG0488	(ABC) transporter
ABBFA_RS00060	COG0596	Alpha beta hydrolase
ABBFA_RS00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABBFA_RS00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABBFA_RS00115	COG0733	neurotransmitter:sodium symporter activity
ABBFA_RS00150	COG0583	DNA-binding transcription factor activity
ABBFA_RS00155	COG2233	PERMEase
ABBFA_RS00170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABBFA_RS00205	COG2814	Major facilitator Superfamily
ABBFA_RS00210	COG0656	L-ascorbic acid biosynthetic process
ABBFA_RS00215	COG0583	DNA-binding transcription factor activity
ABBFA_RS00230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABBFA_RS00235	COG1064	alcohol dehydrogenase
ABBFA_RS00240	COG2818	Glycosylase
ABBFA_RS00255	COG1194	a g-specific adenine glycosylase
ABBFA_RS00275	COG2983	Belongs to the UPF0260 family
ABBFA_RS00280	COG2133	pyrroloquinoline quinone binding
ABBFA_RS00285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABBFA_RS00290	COG2116	formate transmembrane transporter activity
ABBFA_RS00310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABBFA_RS00315	COG1335	isochorismatase
ABBFA_RS00320	COG0385	Bile acid
ABBFA_RS00325	COG0534	Mate efflux family protein
ABBFA_RS00330	COG1683	Conserved Protein
ABBFA_RS00350	COG0625	glutathione transferase activity
ABBFA_RS00360	COG1113	amino acid transport
ABBFA_RS00370	COG0523	cobalamin synthesis protein
ABBFA_RS00380	COG2188	Transcriptional regulator
ABBFA_RS00410	COG0010	Belongs to the arginase family
ABBFA_RS00425	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABBFA_RS00460	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABBFA_RS00470	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABBFA_RS00475	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABBFA_RS00565	COG0534	Mate efflux family protein
ABBFA_RS00570	COG0436	Aminotransferase
ABBFA_RS00575	COG2733	membrane
ABBFA_RS00590	COG2918	glutathione biosynthetic process
ABBFA_RS00605	COG5632	N-Acetylmuramoyl-L-alanine amidase
ABBFA_RS00605	COG3409	Peptidoglycan-binding domain 1 protein
ABBFA_RS00605	COG1388	LysM domain
ABBFA_RS00635	COG3150	esterase
ABBFA_RS00645	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABBFA_RS00655	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABBFA_RS00665	COG2233	PERMEase
ABBFA_RS00670	COG2351	hydroxyisourate hydrolase activity
ABBFA_RS00705	COG3706	GGDEF domain
ABBFA_RS00720	COG1393	Belongs to the ArsC family
ABBFA_RS00725	COG0708	Exodeoxyribonuclease III
ABBFA_RS00745	COG0189	ligase activity
ABBFA_RS00765	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABBFA_RS00775	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABBFA_RS00790	COG4942	peptidase
ABBFA_RS00800	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABBFA_RS00810	COG2119	membrane
ABBFA_RS00815	COG4774	siderophore transport
ABBFA_RS00820	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABBFA_RS00820	COG0426	domain, Protein
ABBFA_RS00845	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABBFA_RS00865	COG1902	pentaerythritol trinitrate reductase activity
ABBFA_RS00870	COG1519	Transferase
ABBFA_RS00875	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABBFA_RS00880	COG0668	transmembrane transport
ABBFA_RS00890	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABBFA_RS00895	COG1335	isochorismatase
ABBFA_RS00900	COG1522	sequence-specific DNA binding
ABBFA_RS00925	COG0784	Response regulator, receiver
ABBFA_RS00925	COG2205	protein histidine kinase activity
ABBFA_RS00925	COG2198	Histidine kinase
ABBFA_RS00930	COG3162	membrane
ABBFA_RS00935	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABBFA_RS00945	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABBFA_RS00960	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABBFA_RS00965	COG1309	transcriptional regulator
ABBFA_RS00985	COG0351	phosphomethylpyrimidine kinase
ABBFA_RS00985	COG0352	thiamine-phosphate diphosphorylase activity
ABBFA_RS00985	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABBFA_RS00995	COG2814	Major facilitator Superfamily
ABBFA_RS01010	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABBFA_RS01020	COG1113	amino acid transport
ABBFA_RS01030	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABBFA_RS01035	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS01045	COG1335	isochorismatase
ABBFA_RS01100	COG1401	restriction endodeoxyribonuclease activity
ABBFA_RS01140	COG1073	alpha beta
ABBFA_RS01145	COG0583	DNA-binding transcription factor activity
ABBFA_RS01160	COG1309	transcriptional regulator
ABBFA_RS01250	COG2814	Major facilitator Superfamily
ABBFA_RS01255	COG0583	DNA-binding transcription factor activity
ABBFA_RS01275	COG0667	Aldo Keto reductase
ABBFA_RS01300	COG1733	regulation of RNA biosynthetic process
ABBFA_RS01315	COG1733	regulation of RNA biosynthetic process
ABBFA_RS01325	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABBFA_RS01335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABBFA_RS01395	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABBFA_RS01435	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABBFA_RS01465	COG0427	acetyl-CoA hydrolase
ABBFA_RS01490	COG0659	secondary active sulfate transmembrane transporter activity
ABBFA_RS01495	COG4221	oxidoreductase activity
ABBFA_RS01500	COG2873	o-acetylhomoserine
ABBFA_RS01505	COG0488	(ABC) transporter
ABBFA_RS01570	COG0833	amino acid
ABBFA_RS01615	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABBFA_RS01620	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABBFA_RS01635	COG2226	methyltransferase
ABBFA_RS01685	COG0070	glutamate synthase
ABBFA_RS01685	COG0069	glutamate synthase activity
ABBFA_RS01685	COG0067	glutamate synthase
ABBFA_RS01690	COG0493	'glutamate synthase
ABBFA_RS01700	COG1704	LemA family
ABBFA_RS01705	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABBFA_RS01720	COG3307	-O-antigen
ABBFA_RS01740	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABBFA_RS01755	COG0194	GDP metabolic process
ABBFA_RS01805	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABBFA_RS01825	COG5380	lipid catabolic process
ABBFA_RS01830	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABBFA_RS01855	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABBFA_RS01860	COG0277	FAD linked oxidase domain protein
ABBFA_RS01870	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ABBFA_RS01875	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABBFA_RS01890	COG1289	transmembrane transporter activity
ABBFA_RS01900	COG0628	permease
ABBFA_RS01905	COG1192	Involved in chromosome partitioning
ABBFA_RS01935	COG0833	amino acid
ABBFA_RS01940	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABBFA_RS01945	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABBFA_RS01955	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS01995	COG0583	DNA-binding transcription factor activity
ABBFA_RS02045	COG0517	IMP dehydrogenase activity
ABBFA_RS02050	COG1983	PspC domain protein
ABBFA_RS02060	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS02075	COG0408	coproporphyrinogen oxidase activity
ABBFA_RS02095	COG0513	Belongs to the DEAD box helicase family
ABBFA_RS02105	COG1127	ABC transporter
ABBFA_RS02110	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABBFA_RS02120	COG2854	intermembrane phospholipid transfer
ABBFA_RS02130	COG0598	Magnesium transport protein CorA
ABBFA_RS02140	COG0494	nUDIX hydrolase
ABBFA_RS02145	COG1040	competence protein
ABBFA_RS02150	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABBFA_RS02170	COG1946	Acyl-CoA thioesterase
ABBFA_RS02175	COG1301	dicarboxylic acid transport
ABBFA_RS02190	COG1959	2 iron, 2 sulfur cluster binding
ABBFA_RS02195	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABBFA_RS02195	COG1017	nitric oxide dioxygenase activity
ABBFA_RS02200	COG0433	COG0433 Predicted ATPase
ABBFA_RS02205	COG0626	cystathionine gamma-synthase activity
ABBFA_RS02360	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS02365	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABBFA_RS02395	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ABBFA_RS02400	COG0339	signal peptide processing
ABBFA_RS02405	COG0557	exoribonuclease II activity
ABBFA_RS02450	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABBFA_RS02455	COG2169	Transcriptional regulator
ABBFA_RS02460	COG0697	spore germination
ABBFA_RS02465	COG1295	ribonuclease BN
ABBFA_RS02500	COG1702	phosphate starvation-inducible protein PhoH
ABBFA_RS02510	COG0741	lytic transglycosylase activity
ABBFA_RS02510	COG0739	heme binding
ABBFA_RS02510	COG1196	nuclear chromosome segregation
ABBFA_RS02540	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABBFA_RS02545	COG1183	phosphatidylcholine synthase activity
ABBFA_RS02590	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS02595	COG1309	transcriptional regulator
ABBFA_RS02610	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABBFA_RS02615	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS02635	COG2969	positive regulation of protein catabolic process
ABBFA_RS02645	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABBFA_RS02660	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABBFA_RS02665	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABBFA_RS02685	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABBFA_RS02695	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABBFA_RS02700	COG1408	metallophosphoesterase
ABBFA_RS02710	COG2199	diguanylate cyclase activity
ABBFA_RS02770	COG1607	acyl-coa hydrolase
ABBFA_RS02800	COG2350	Protein conserved in bacteria
ABBFA_RS02810	COG0613	PHP domain protein
ABBFA_RS02815	COG3781	membrane
ABBFA_RS02825	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABBFA_RS02840	COG1862	Preprotein translocase
ABBFA_RS02870	COG2205	protein histidine kinase activity
ABBFA_RS02875	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABBFA_RS02895	COG0726	polysaccharide deacetylase
ABBFA_RS02900	COG0463	Glycosyl transferase, family 2
ABBFA_RS02905	COG0438	transferase activity, transferring glycosyl groups
ABBFA_RS02970	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS02975	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS02985	COG2205	protein histidine kinase activity
ABBFA_RS02990	COG0745	RESPONSE REGULATOR receiver
ABBFA_RS02995	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABBFA_RS03015	COG2096	Adenosyltransferase
ABBFA_RS03065	COG0285	dihydrofolate synthase activity
ABBFA_RS03085	COG0450	alkyl hydroperoxide reductase
ABBFA_RS03100	COG0477	Major facilitator Superfamily
ABBFA_RS03105	COG1272	protein, Hemolysin III
ABBFA_RS03115	COG2153	protein acetylation
ABBFA_RS03135	COG0183	Belongs to the thiolase family
ABBFA_RS03140	COG2207	Transcriptional regulator
ABBFA_RS03160	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABBFA_RS03180	COG0183	Belongs to the thiolase family
ABBFA_RS03190	COG2885	chlorophyll binding
ABBFA_RS03190	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABBFA_RS03195	COG1690	Belongs to the RtcB family
ABBFA_RS03200	COG0833	amino acid
ABBFA_RS03210	COG2233	PERMEase
ABBFA_RS03215	COG1217	gtp-binding protein TYPA
ABBFA_RS03240	COG2094	Belongs to the DNA glycosylase MPG family
ABBFA_RS03245	COG4772	TonB-dependent receptor
ABBFA_RS03250	COG1902	pentaerythritol trinitrate reductase activity
ABBFA_RS03255	COG0679	Auxin Efflux Carrier
ABBFA_RS03265	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABBFA_RS03270	COG0354	folic acid binding
ABBFA_RS03280	COG3189	MarR family transcriptional regulator
ABBFA_RS03285	COG2824	Alkylphosphonate utilization operon protein PhnA
ABBFA_RS03290	COG3422	double-strand break repair
ABBFA_RS03330	COG0840	transmembrane signaling receptor activity
ABBFA_RS03345	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABBFA_RS03360	COG5510	response to toxic substance
ABBFA_RS03370	COG2832	Protein of unknown function (DUF454)
ABBFA_RS03375	COG1376	ErfK ybiS ycfS ynhG family protein
ABBFA_RS03415	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ABBFA_RS03425	COG1289	transmembrane transporter activity
ABBFA_RS03430	COG2814	Major facilitator Superfamily
ABBFA_RS03450	COG1115	amino acid carrier protein
ABBFA_RS03455	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABBFA_RS03460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABBFA_RS03465	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ABBFA_RS03490	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABBFA_RS03500	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABBFA_RS03505	COG1077	Cell shape determining protein MreB Mrl
ABBFA_RS03510	COG1792	Involved in formation and maintenance of cell shape
ABBFA_RS03515	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABBFA_RS03520	COG0424	maF-like protein
ABBFA_RS03525	COG1530	ribonuclease E activity
ABBFA_RS03535	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABBFA_RS03545	COG0560	Phosphoserine phosphatase
ABBFA_RS03555	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABBFA_RS03580	COG2207	Transcriptional regulator
ABBFA_RS03600	COG1113	amino acid transport
ABBFA_RS03605	COG2828	Protein conserved in bacteria
ABBFA_RS03610	COG0142	geranyltranstransferase activity
ABBFA_RS03615	COG2315	Protein conserved in bacteria
ABBFA_RS03630	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABBFA_RS03650	COG2194	sulfuric ester hydrolase activity
ABBFA_RS03655	COG0745	RESPONSE REGULATOR receiver
ABBFA_RS03660	COG0642	Histidine kinase
ABBFA_RS03670	COG0004	ammonium transporteR
ABBFA_RS03680	COG0583	DNA-binding transcription factor activity
ABBFA_RS03700	COG0525	valine-tRNA ligase activity
ABBFA_RS03710	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS03720	COG0393	Putative heavy-metal-binding
ABBFA_RS03725	COG0393	Putative heavy-metal-binding
ABBFA_RS03730	COG1538	Outer membrane efflux protein
ABBFA_RS03740	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABBFA_RS03745	COG0671	phosphoesterase, PA-phosphatase related
ABBFA_RS03775	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABBFA_RS03790	COG1648	precorrin-2 dehydrogenase activity
ABBFA_RS03790	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABBFA_RS03795	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABBFA_RS03800	COG1733	regulation of RNA biosynthetic process
ABBFA_RS03810	COG0531	amino acid
ABBFA_RS03825	COG0321	lipoyl(octanoyl) transferase activity
ABBFA_RS03830	COG2921	Belongs to the UPF0250 family
ABBFA_RS03865	COG2009	succinate dehydrogenase
ABBFA_RS03870	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABBFA_RS03875	COG1053	succinate dehydrogenase
ABBFA_RS03880	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABBFA_RS03905	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABBFA_RS03940	COG2354	Protein conserved in bacteria
ABBFA_RS03945	COG2321	neutral zinc metallopeptidase
ABBFA_RS03965	COG2843	Capsule synthesis protein
ABBFA_RS03980	COG0589	response to stress
ABBFA_RS04000	COG0505	Belongs to the CarA family
ABBFA_RS04025	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABBFA_RS04030	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABBFA_RS04080	COG0477	Major facilitator Superfamily
ABBFA_RS04085	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABBFA_RS04100	COG1597	lipid kinase activity
ABBFA_RS04105	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABBFA_RS04130	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABBFA_RS04135	COG0584	glycerophosphoryl diester phosphodiesterase
ABBFA_RS04155	COG0741	lytic transglycosylase activity
ABBFA_RS04180	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABBFA_RS04195	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABBFA_RS04235	COG0778	Nitroreductase
ABBFA_RS04250	COG1929	Belongs to the glycerate kinase type-1 family
ABBFA_RS04255	COG0243	molybdopterin cofactor binding
ABBFA_RS04260	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABBFA_RS04265	COG3339	Conserved Protein
ABBFA_RS04275	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABBFA_RS04290	COG1113	amino acid transport
ABBFA_RS04300	COG0019	diaminopimelate decarboxylase activity
ABBFA_RS04310	COG2267	carboxylic ester hydrolase activity
ABBFA_RS04315	COG1280	lysine exporter protein (LysE YggA)
ABBFA_RS04320	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABBFA_RS04350	COG0463	Glycosyl transferase, family 2
ABBFA_RS04370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABBFA_RS04400	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABBFA_RS04405	COG1136	(ABC) transporter
ABBFA_RS04410	COG2333	competence protein COMEC
ABBFA_RS04410	COG0658	competence protein
ABBFA_RS04420	COG0616	signal peptide processing
ABBFA_RS04420	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABBFA_RS04425	COG0596	Alpha beta hydrolase
ABBFA_RS04430	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABBFA_RS04440	COG0628	permease
ABBFA_RS04475	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABBFA_RS04495	COG0823	Involved in the tonB-independent uptake of proteins
ABBFA_RS04515	COG0824	Thioesterase
ABBFA_RS04520	COG1473	amidohydrolase
ABBFA_RS04540	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABBFA_RS04540	COG0047	phosphoribosylformylglycinamidine synthase activity
ABBFA_RS04545	COG2814	Major facilitator Superfamily
ABBFA_RS04555	COG1024	Enoyl-CoA hydratase
ABBFA_RS04560	COG1051	belongs to the nudix hydrolase family
ABBFA_RS04560	COG1056	cytidyltransferase-related domain
ABBFA_RS04570	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABBFA_RS04585	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABBFA_RS04600	COG4625	pathogenesis
ABBFA_RS04605	COG0583	DNA-binding transcription factor activity
ABBFA_RS04610	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABBFA_RS04615	COG4208	sulfate ABC transporter
ABBFA_RS04620	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABBFA_RS04630	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABBFA_RS04635	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABBFA_RS04640	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABBFA_RS04660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABBFA_RS04675	COG0681	Belongs to the peptidase S26 family
ABBFA_RS04690	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABBFA_RS04700	COG1381	Involved in DNA repair and RecF pathway recombination
ABBFA_RS04705	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABBFA_RS04715	COG4221	oxidoreductase activity
ABBFA_RS04745	COG0436	Aminotransferase
ABBFA_RS04765	COG0556	nucleotide-excision repair
ABBFA_RS04820	COG2070	2-Nitropropane dioxygenase
ABBFA_RS04850	COG1215	transferase activity, transferring glycosyl groups
ABBFA_RS04865	COG0415	Belongs to the DNA photolyase family
ABBFA_RS04875	COG1252	NADH dehydrogenase
ABBFA_RS04880	COG1686	Belongs to the peptidase S11 family
ABBFA_RS04895	COG1187	pseudouridine synthase activity
ABBFA_RS04920	COG0477	Major facilitator Superfamily
ABBFA_RS04925	COG0583	DNA-binding transcription factor activity
ABBFA_RS04930	COG1823	symporter activity
ABBFA_RS04940	COG0612	Peptidase, M16
ABBFA_RS04970	COG1203	CRISPR-associated helicase, Cas3
ABBFA_RS04995	COG0352	thiamine-phosphate diphosphorylase activity
ABBFA_RS05030	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABBFA_RS05045	COG1309	transcriptional regulator
ABBFA_RS05055	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABBFA_RS05060	COG0076	glutamate decarboxylase activity
ABBFA_RS05070	COG1522	sequence-specific DNA binding
ABBFA_RS05075	COG3961	Belongs to the TPP enzyme family
ABBFA_RS05080	COG1113	amino acid transport
ABBFA_RS05085	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABBFA_RS05090	COG0573	inorganic phosphate transmembrane transporter activity
ABBFA_RS05100	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABBFA_RS05105	COG0616	signal peptide processing
ABBFA_RS05140	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABBFA_RS05145	COG1686	Belongs to the peptidase S11 family
ABBFA_RS05170	COG0583	DNA-binding transcription factor activity
ABBFA_RS05175	COG1067	ATP-dependent peptidase activity
ABBFA_RS05200	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ABBFA_RS05220	COG1966	Carbon starvation protein
ABBFA_RS05225	COG2879	small protein
ABBFA_RS05275	COG1741	Belongs to the pirin family
ABBFA_RS05285	COG2964	Protein conserved in bacteria
ABBFA_RS05300	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABBFA_RS05305	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABBFA_RS05310	COG4605	iron ion homeostasis
ABBFA_RS05315	COG4604	ABC transporter, ATP-binding protein
ABBFA_RS05320	COG4607	ABC-type enterochelin transport system periplasmic component
ABBFA_RS05325	COG4774	siderophore transport
ABBFA_RS05335	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABBFA_RS05340	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABBFA_RS05345	COG1535	isochorismatase
ABBFA_RS05345	COG3433	isochorismatase activity
ABBFA_RS05360	COG1132	(ABC) transporter
ABBFA_RS05365	COG1132	(ABC) transporter
ABBFA_RS05370	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ABBFA_RS05380	COG1169	isochorismate synthase
ABBFA_RS05395	COG3739	integral membrane protein
ABBFA_RS05415	COG0302	gtp cyclohydrolase
ABBFA_RS05425	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABBFA_RS05455	COG0308	aminopeptidase N
ABBFA_RS05460	COG0512	Glutamine amidotransferase of anthranilate synthase
ABBFA_RS05475	COG0174	glutamine synthetase
ABBFA_RS05485	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABBFA_RS05520	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABBFA_RS05525	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABBFA_RS05530	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABBFA_RS05550	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABBFA_RS05555	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABBFA_RS05560	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABBFA_RS05575	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS05580	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABBFA_RS05585	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABBFA_RS05595	COG2223	nitrite transmembrane transporter activity
ABBFA_RS05605	COG0024	Methionine aminopeptidase
ABBFA_RS05610	COG0052	Belongs to the universal ribosomal protein uS2 family
ABBFA_RS05625	COG2207	Transcriptional regulator
ABBFA_RS05650	COG2951	lytic endotransglycosylase activity
ABBFA_RS05655	COG0772	Belongs to the SEDS family
ABBFA_RS05670	COG0842	Transport permease protein
ABBFA_RS05675	COG1131	(ABC) transporter
ABBFA_RS05720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABBFA_RS05735	COG4215	(ABC) transporter
ABBFA_RS05740	COG4160	amino acid transport
ABBFA_RS05745	COG4598	ABC transporter
ABBFA_RS05755	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABBFA_RS05760	COG0826	peptidase U32
ABBFA_RS05765	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABBFA_RS05780	COG1720	tRNA m6t6A37 methyltransferase activity
ABBFA_RS05790	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ABBFA_RS05805	COG0642	Histidine kinase
ABBFA_RS05815	COG0494	nUDIX hydrolase
ABBFA_RS05825	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABBFA_RS05830	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABBFA_RS05835	COG3139	Protein of unknown function (DUF1315)
ABBFA_RS05840	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABBFA_RS05850	COG1301	dicarboxylic acid transport
ABBFA_RS05855	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS05860	COG2819	hydrolase of the alpha beta superfamily
ABBFA_RS05870	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABBFA_RS05880	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABBFA_RS05885	COG1234	tRNA 3'-trailer cleavage
ABBFA_RS05910	COG2363	Small membrane protein
ABBFA_RS05930	COG0513	Belongs to the DEAD box helicase family
ABBFA_RS05940	COG0778	Nitroreductase
ABBFA_RS05970	COG1286	toxin biosynthetic process
ABBFA_RS05995	COG4783	chaperone-mediated protein folding
ABBFA_RS06000	COG1610	YqeY-like protein
ABBFA_RS06100	COG3111	PFAM Bacterial OB fold (BOF) protein
ABBFA_RS06125	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABBFA_RS06130	COG0786	glutamate:sodium symporter activity
ABBFA_RS06140	COG0583	DNA-binding transcription factor activity
ABBFA_RS06150	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS06165	COG2186	Transcriptional regulator
ABBFA_RS06225	COG0477	Major facilitator Superfamily
ABBFA_RS06250	COG2995	paraquat-inducible protein a
ABBFA_RS06255	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABBFA_RS06255	COG3008	intermembrane lipid transfer
ABBFA_RS06265	COG2351	hydroxyisourate hydrolase activity
ABBFA_RS06305	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABBFA_RS06315	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABBFA_RS06320	COG0642	Histidine kinase
ABBFA_RS06325	COG0745	RESPONSE REGULATOR receiver
ABBFA_RS06345	COG1794	racemase activity, acting on amino acids and derivatives
ABBFA_RS06375	COG1301	dicarboxylic acid transport
ABBFA_RS06385	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABBFA_RS06390	COG2011	ABC-type metal ion transport system permease component
ABBFA_RS06395	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABBFA_RS06400	COG1464	Belongs to the NlpA lipoprotein family
ABBFA_RS06405	COG0151	Belongs to the GarS family
ABBFA_RS06410	COG0138	bifunctional purine biosynthesis protein purh
ABBFA_RS06415	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ABBFA_RS06445	COG2308	Evidence 4 Homologs of previously reported genes of
ABBFA_RS06455	COG1305	Transglutaminase-like
ABBFA_RS06465	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABBFA_RS06470	COG0305	Participates in initiation and elongation during chromosome replication
ABBFA_RS06495	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABBFA_RS06505	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABBFA_RS06510	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABBFA_RS06535	COG0726	polysaccharide deacetylase
ABBFA_RS06535	COG1649	PFAM Uncharacterised BCR, COG1649
ABBFA_RS06540	COG1215	transferase activity, transferring glycosyl groups
ABBFA_RS06545	COG3658	cytochrome
ABBFA_RS06555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABBFA_RS06575	COG0583	DNA-binding transcription factor activity
ABBFA_RS06595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABBFA_RS06600	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABBFA_RS06615	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS06620	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABBFA_RS06625	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABBFA_RS06650	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABBFA_RS06655	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABBFA_RS06665	COG2205	protein histidine kinase activity
ABBFA_RS06670	COG0745	RESPONSE REGULATOR receiver
ABBFA_RS06675	COG0174	glutamine synthetase
ABBFA_RS06695	COG0729	surface antigen
ABBFA_RS06725	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABBFA_RS06730	COG2814	Major facilitator Superfamily
ABBFA_RS06745	COG0583	DNA-binding transcription factor activity
ABBFA_RS06760	COG1187	pseudouridine synthase activity
ABBFA_RS06780	COG0802	atpase or kinase
ABBFA_RS06785	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABBFA_RS06795	COG1923	regulation of RNA biosynthetic process
ABBFA_RS06800	COG0697	spore germination
ABBFA_RS06825	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABBFA_RS06830	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABBFA_RS06830	COG0519	Catalyzes the synthesis of GMP from XMP
ABBFA_RS06835	COG4302	ethanolamine ammonia-lyase activity
ABBFA_RS06840	COG4303	Ethanolamine ammonia lyase large subunit
ABBFA_RS06845	COG0531	amino acid
ABBFA_RS06865	COG1454	alcohol dehydrogenase
ABBFA_RS06870	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABBFA_RS06895	COG0308	aminopeptidase N
ABBFA_RS06935	COG1605	Chorismate mutase
ABBFA_RS06955	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABBFA_RS06975	COG1309	transcriptional regulator
ABBFA_RS06985	COG0668	transmembrane transport
ABBFA_RS07015	COG4773	Receptor
ABBFA_RS07035	COG0488	(ABC) transporter
ABBFA_RS07040	COG0589	response to stress
ABBFA_RS07055	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABBFA_RS07065	COG3135	benzoate transporter
ABBFA_RS07070	COG1522	sequence-specific DNA binding
ABBFA_RS07080	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABBFA_RS07085	COG0583	DNA-binding transcription factor activity
ABBFA_RS07095	COG0183	Belongs to the thiolase family
ABBFA_RS07105	COG2030	dehydratase
ABBFA_RS07110	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABBFA_RS07125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABBFA_RS07135	COG0824	Thioesterase
ABBFA_RS07140	COG1454	alcohol dehydrogenase
ABBFA_RS07150	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABBFA_RS07170	COG0069	glutamate synthase activity
ABBFA_RS07190	COG2814	Major facilitator Superfamily
ABBFA_RS07205	COG0511	ligase activity, forming carbon-carbon bonds
ABBFA_RS07225	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABBFA_RS07225	COG1116	anion transmembrane transporter activity
ABBFA_RS07230	COG0745	RESPONSE REGULATOR receiver
ABBFA_RS07240	COG2146	nitrite reductase [NAD(P)H] activity
ABBFA_RS07240	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABBFA_RS07245	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABBFA_RS07250	COG0243	molybdopterin cofactor binding
ABBFA_RS07260	COG0243	molybdopterin cofactor binding
ABBFA_RS07265	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABBFA_RS07280	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABBFA_RS07280	COG0315	cyclic pyranopterin monophosphate synthase activity
ABBFA_RS07285	COG0303	'Molybdopterin
ABBFA_RS07300	COG0697	spore germination
ABBFA_RS07320	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABBFA_RS07325	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABBFA_RS07385	COG2204	response regulator
ABBFA_RS07390	COG3852	Histidine kinase
ABBFA_RS07415	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABBFA_RS07420	COG0575	Belongs to the CDS family
ABBFA_RS07455	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABBFA_RS07470	COG2137	regulation of response to DNA damage stimulus
ABBFA_RS07480	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABBFA_RS07485	COG1011	Hydrolase
ABBFA_RS07510	COG1522	sequence-specific DNA binding
ABBFA_RS07520	COG1113	amino acid transport
ABBFA_RS07535	COG0659	secondary active sulfate transmembrane transporter activity
ABBFA_RS07540	COG2135	peptidase activity
ABBFA_RS07555	COG3300	MHYT domain
ABBFA_RS07555	COG5001	Diguanylate cyclase
ABBFA_RS07575	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABBFA_RS07575	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ABBFA_RS07575	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABBFA_RS07580	COG1105	Belongs to the carbohydrate kinase PfkB family
ABBFA_RS07585	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABBFA_RS07585	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABBFA_RS07615	COG0024	Methionine aminopeptidase
ABBFA_RS07620	COG0583	DNA-binding transcription factor activity
ABBFA_RS07630	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABBFA_RS07635	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABBFA_RS07640	COG0516	GMP reductase activity
ABBFA_RS07640	COG0517	IMP dehydrogenase activity
ABBFA_RS07665	COG0552	protein localization to endoplasmic reticulum
ABBFA_RS07675	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
ABBFA_RS07685	COG4890	Cyd operon protein YbgT
ABBFA_RS07690	COG1294	oxidase, subunit
ABBFA_RS07705	COG1585	Membrane protein implicated in regulation of membrane protease activity
ABBFA_RS07715	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABBFA_RS07720	COG4774	siderophore transport
ABBFA_RS07735	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABBFA_RS07740	COG0569	domain protein
ABBFA_RS07745	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABBFA_RS07775	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABBFA_RS07780	COG0542	response to heat
ABBFA_RS07805	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABBFA_RS07805	COG1902	pentaerythritol trinitrate reductase activity
ABBFA_RS07850	COG2323	membrane
ABBFA_RS07855	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABBFA_RS07865	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABBFA_RS07870	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABBFA_RS07875	COG0183	Belongs to the thiolase family
ABBFA_RS07880	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABBFA_RS07885	COG0596	Alpha beta hydrolase
ABBFA_RS07890	COG2271	Major facilitator Superfamily
ABBFA_RS07895	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABBFA_RS07900	COG3485	protocatechuate 3,4-dioxygenase
ABBFA_RS07905	COG3485	protocatechuate 3,4-dioxygenase
ABBFA_RS07910	COG0710	3-dehydroquinate dehydratase activity
ABBFA_RS07915	COG3420	alginic acid biosynthetic process
ABBFA_RS07920	COG3659	wide pore channel activity
ABBFA_RS07925	COG4993	Dehydrogenase
ABBFA_RS07935	COG2391	methyltransferase activity
ABBFA_RS07950	COG1414	Transcriptional regulator
ABBFA_RS07955	COG0583	DNA-binding transcription factor activity
ABBFA_RS07960	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS07985	COG2814	Major facilitator Superfamily
ABBFA_RS07995	COG0154	amidase activity
ABBFA_RS08015	COG4638	Rieske (2fe-2S)
ABBFA_RS08025	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS08035	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABBFA_RS08045	COG3733	amine oxidase
ABBFA_RS08055	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS08065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABBFA_RS08070	COG0183	Belongs to the thiolase family
ABBFA_RS08080	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABBFA_RS08085	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABBFA_RS08095	COG4829	muconolactone delta-isomerase
ABBFA_RS08100	COG4948	Mandelate Racemase Muconate Lactonizing
ABBFA_RS08105	COG0583	DNA-binding transcription factor activity
ABBFA_RS08115	COG2186	Transcriptional regulator
ABBFA_RS08135	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS08150	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABBFA_RS08150	COG1902	pentaerythritol trinitrate reductase activity
ABBFA_RS08190	COG1309	transcriptional regulator
ABBFA_RS08205	COG4689	acetoacetate decarboxylase
ABBFA_RS08215	COG1902	pentaerythritol trinitrate reductase activity
ABBFA_RS08235	COG1335	isochorismatase
ABBFA_RS08240	COG0583	DNA-binding transcription factor activity
ABBFA_RS08250	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABBFA_RS08250	COG0475	glutathione-regulated potassium exporter activity
ABBFA_RS08260	COG1473	amidohydrolase
ABBFA_RS08330	COG2188	Transcriptional regulator
ABBFA_RS08345	COG0583	DNA-binding transcription factor activity
ABBFA_RS08360	COG1566	PFAM secretion protein HlyD family protein
ABBFA_RS08375	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS08380	COG0129	dihydroxy-acid dehydratase activity
ABBFA_RS08390	COG0583	DNA-binding transcription factor activity
ABBFA_RS08395	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABBFA_RS08405	COG2084	Dehydrogenase
ABBFA_RS08420	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABBFA_RS08480	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABBFA_RS08495	COG0556	nucleotide-excision repair
ABBFA_RS08535	COG1073	alpha beta
ABBFA_RS08545	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS08560	COG2207	Transcriptional regulator
ABBFA_RS08570	COG2205	protein histidine kinase activity
ABBFA_RS08575	COG0745	RESPONSE REGULATOR receiver
ABBFA_RS08580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABBFA_RS08585	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABBFA_RS08590	COG1538	Outer membrane efflux protein
ABBFA_RS08600	COG2072	flavoprotein involved in K transport
ABBFA_RS08610	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABBFA_RS08630	COG3539	Fimbrial protein
ABBFA_RS08655	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABBFA_RS08665	COG0753	catalase activity
ABBFA_RS08680	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABBFA_RS08745	COG3433	isochorismatase activity
ABBFA_RS08745	COG1535	isochorismatase
ABBFA_RS08750	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS08755	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABBFA_RS08760	COG4149	molybdate abc transporter
ABBFA_RS08765	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABBFA_RS08775	COG4638	Rieske (2fe-2S)
ABBFA_RS08780	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABBFA_RS08785	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABBFA_RS08785	COG0543	2 iron, 2 sulfur cluster binding
ABBFA_RS08800	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABBFA_RS08810	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS08825	COG2207	Transcriptional regulator
ABBFA_RS08830	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS08835	COG2610	gluconate transmembrane transporter activity
ABBFA_RS08845	COG0583	DNA-binding transcription factor activity
ABBFA_RS08860	COG2031	fatty acid transporter
ABBFA_RS08865	COG0183	Belongs to the thiolase family
ABBFA_RS08870	COG0583	DNA-binding transcription factor activity
ABBFA_RS08875	COG0583	DNA-binding transcription factor activity
ABBFA_RS08890	COG1027	Aspartate ammonia-lyase
ABBFA_RS08900	COG0477	Major facilitator Superfamily
ABBFA_RS08920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABBFA_RS08925	COG4521	taurine ABC transporter
ABBFA_RS08940	COG2188	Transcriptional regulator
ABBFA_RS08950	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABBFA_RS08955	COG1733	regulation of RNA biosynthetic process
ABBFA_RS08960	COG2207	Transcriptional regulator
ABBFA_RS08960	COG3708	Transcriptional regulator
ABBFA_RS08975	COG0730	response to heat
ABBFA_RS08985	COG3453	Protein conserved in bacteria
ABBFA_RS08985	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABBFA_RS08995	COG3781	membrane
ABBFA_RS09000	COG1063	alcohol dehydrogenase
ABBFA_RS09010	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABBFA_RS09015	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABBFA_RS09020	COG0022	dehydrogenase e1 component
ABBFA_RS09025	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABBFA_RS09030	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABBFA_RS09045	COG3706	GGDEF domain
ABBFA_RS09060	COG0133	tryptophan synthase activity
ABBFA_RS09070	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABBFA_RS09105	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABBFA_RS09130	COG2226	methyltransferase
ABBFA_RS09185	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABBFA_RS09190	COG4773	Receptor
ABBFA_RS09210	COG0730	response to heat
ABBFA_RS09215	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABBFA_RS09230	COG0406	alpha-ribazole phosphatase activity
ABBFA_RS09235	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABBFA_RS09250	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABBFA_RS09280	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABBFA_RS09290	COG4264	IucA IucC family
ABBFA_RS09295	COG4264	IucA IucC family
ABBFA_RS09300	COG2814	Major facilitator Superfamily
ABBFA_RS09315	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABBFA_RS09330	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS09335	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS09340	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABBFA_RS09345	COG2207	Transcriptional regulator
ABBFA_RS09350	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABBFA_RS09355	COG0776	regulation of translation
ABBFA_RS09380	COG0822	iron-sulfur transferase activity
ABBFA_RS09385	COG0316	Belongs to the HesB IscA family
ABBFA_RS09415	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABBFA_RS09435	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABBFA_RS09440	COG0702	epimerase
ABBFA_RS09475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABBFA_RS09485	COG0339	signal peptide processing
ABBFA_RS09505	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
ABBFA_RS09530	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABBFA_RS09535	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABBFA_RS09565	COG0776	regulation of translation
ABBFA_RS09630	COG0084	hydrolase, TatD family'
ABBFA_RS09650	COG1663	tetraacyldisaccharide 4'-kinase activity
ABBFA_RS09655	COG1132	(ABC) transporter
ABBFA_RS09665	COG0811	peptide transport
ABBFA_RS09670	COG1475	DNA binding
ABBFA_RS09675	COG1192	Involved in chromosome partitioning
ABBFA_RS09685	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABBFA_RS09700	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABBFA_RS09705	COG0191	fructose-bisphosphate aldolase activity
ABBFA_RS09725	COG0424	maF-like protein
ABBFA_RS09730	COG2850	peptidyl-arginine hydroxylation
ABBFA_RS09740	COG0640	Transcriptional regulator
ABBFA_RS09750	COG3619	membrane
ABBFA_RS09755	COG3122	Protein conserved in bacteria
ABBFA_RS09760	COG1132	(ABC) transporter
ABBFA_RS09780	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABBFA_RS09785	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABBFA_RS09795	COG0506	proline dehydrogenase activity
ABBFA_RS09795	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABBFA_RS09795	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABBFA_RS09800	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABBFA_RS09815	COG3698	Phosphodiester glycosidase
ABBFA_RS09825	COG2353	YceI-like domain
ABBFA_RS09835	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABBFA_RS09880	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABBFA_RS09880	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABBFA_RS09905	COG3539	Fimbrial protein
ABBFA_RS09910	COG3121	Chaperone
ABBFA_RS09940	COG0697	spore germination
ABBFA_RS09950	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABBFA_RS09960	COG0583	DNA-binding transcription factor activity
ABBFA_RS09980	COG1309	transcriptional regulator
ABBFA_RS09995	COG1522	sequence-specific DNA binding
ABBFA_RS10005	COG1126	abc transporter atp-binding protein
ABBFA_RS10010	COG0765	amino acid transport
ABBFA_RS10015	COG0765	amino acid transport
ABBFA_RS10045	COG1464	Belongs to the NlpA lipoprotein family
ABBFA_RS10055	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABBFA_RS10060	COG2011	ABC-type metal ion transport system permease component
ABBFA_RS10065	COG0012	GTP binding
ABBFA_RS10090	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABBFA_RS10130	COG0386	Belongs to the glutathione peroxidase family
ABBFA_RS10140	COG0436	Aminotransferase
ABBFA_RS10145	COG1301	dicarboxylic acid transport
ABBFA_RS10180	COG3634	alkyl hydroperoxide reductase activity
ABBFA_RS10195	COG0583	DNA-binding transcription factor activity
ABBFA_RS10200	COG0798	PFAM Bile acid sodium symporter
ABBFA_RS10205	COG0640	Transcriptional regulator
ABBFA_RS10220	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABBFA_RS10230	COG0583	DNA-binding transcription factor activity
ABBFA_RS10240	COG1953	Uracil, thiamine, allantoin
ABBFA_RS10250	COG2175	clavaminate synthase activity
ABBFA_RS10255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABBFA_RS10260	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABBFA_RS10265	COG4521	taurine ABC transporter
ABBFA_RS10275	COG0477	Major facilitator Superfamily
ABBFA_RS10300	COG1271	oxidase subunit
ABBFA_RS10305	COG1294	oxidase, subunit
ABBFA_RS10315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABBFA_RS10335	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABBFA_RS10355	COG3052	prosthetic group binding
ABBFA_RS10360	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ABBFA_RS10370	COG2814	Major facilitator Superfamily
ABBFA_RS10385	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABBFA_RS10390	COG1346	cytolysis
ABBFA_RS10400	COG0583	DNA-binding transcription factor activity
ABBFA_RS10405	COG0625	glutathione transferase activity
ABBFA_RS10410	COG0625	glutathione transferase activity
ABBFA_RS10415	COG0583	DNA-binding transcription factor activity
ABBFA_RS10430	COG1045	serine acetyltransferase
ABBFA_RS10435	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABBFA_RS10440	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABBFA_RS10445	COG1280	lysine exporter protein (LysE YggA)
ABBFA_RS10455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABBFA_RS10460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABBFA_RS10465	COG1126	abc transporter atp-binding protein
ABBFA_RS10470	COG0765	amino acid transport
ABBFA_RS10475	COG0765	amino acid transport
ABBFA_RS10495	COG2205	protein histidine kinase activity
ABBFA_RS10495	COG0784	Response regulator, receiver
ABBFA_RS10535	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS10580	COG0583	DNA-binding transcription factor activity
ABBFA_RS10600	COG0318	PFAM AMP-dependent synthetase and ligase
ABBFA_RS10605	COG1309	transcriptional regulator
ABBFA_RS10610	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS10615	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABBFA_RS10620	COG1024	Enoyl-CoA hydratase
ABBFA_RS10625	COG4770	biotin carboxylase activity
ABBFA_RS10635	COG0583	DNA-binding transcription factor activity
ABBFA_RS10650	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS10660	COG2814	Major facilitator Superfamily
ABBFA_RS10670	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABBFA_RS10675	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABBFA_RS10680	COG2814	Major facilitator Superfamily
ABBFA_RS10685	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS10690	COG1024	Enoyl-CoA hydratase
ABBFA_RS10695	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS10700	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABBFA_RS10705	COG0183	Belongs to the thiolase family
ABBFA_RS10715	COG2814	Major facilitator Superfamily
ABBFA_RS10725	COG1024	Enoyl-CoA hydratase
ABBFA_RS10735	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABBFA_RS10740	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS10745	COG2814	Major facilitator Superfamily
ABBFA_RS10750	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABBFA_RS10755	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABBFA_RS10770	COG3842	ATPase activity
ABBFA_RS10775	COG1840	ABC-type Fe3 transport system, periplasmic component
ABBFA_RS10785	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABBFA_RS10790	COG1414	Transcriptional regulator
ABBFA_RS10800	COG0583	DNA-binding transcription factor activity
ABBFA_RS10805	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABBFA_RS10810	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS10820	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABBFA_RS10830	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS10835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABBFA_RS10840	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABBFA_RS10845	COG2267	carboxylic ester hydrolase activity
ABBFA_RS10865	COG3038	cytochrome b561
ABBFA_RS10870	COG0753	catalase activity
ABBFA_RS10875	COG2271	Major facilitator Superfamily
ABBFA_RS10880	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABBFA_RS10885	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABBFA_RS10915	COG1278	Cold shock
ABBFA_RS10950	COG0210	DNA helicase
ABBFA_RS10955	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABBFA_RS10960	COG2050	protein possibly involved in aromatic compounds catabolism
ABBFA_RS10970	COG3327	negative regulation of DNA-templated transcription, initiation
ABBFA_RS10975	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABBFA_RS10980	COG0183	Belongs to the thiolase family
ABBFA_RS10985	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABBFA_RS10990	COG1024	Enoyl-CoA hydratase
ABBFA_RS10995	COG1024	Enoyl-CoA hydratase
ABBFA_RS11000	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABBFA_RS11005	COG2151	metal-sulfur cluster biosynthetic enzyme
ABBFA_RS11010	COG3396	Phenylacetate-CoA oxygenase
ABBFA_RS11015	COG3460	Phenylacetate-CoA oxygenase
ABBFA_RS11020	COG3396	Phenylacetate-CoA oxygenase
ABBFA_RS11025	COG2030	dehydratase
ABBFA_RS11025	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS11030	COG1760	l-serine dehydratase
ABBFA_RS11035	COG0531	amino acid
ABBFA_RS11040	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS11065	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABBFA_RS11085	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABBFA_RS11100	COG0789	Transcriptional regulator
ABBFA_RS11110	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABBFA_RS11125	COG2807	transmembrane transport
ABBFA_RS11130	COG0590	tRNA wobble adenosine to inosine editing
ABBFA_RS11250	COG1116	anion transmembrane transporter activity
ABBFA_RS11255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABBFA_RS11265	COG0864	Transcriptional regulator
ABBFA_RS11275	COG1733	regulation of RNA biosynthetic process
ABBFA_RS11280	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABBFA_RS11285	COG0439	Biotin carboxylase
ABBFA_RS11300	COG1063	alcohol dehydrogenase
ABBFA_RS11310	COG1309	transcriptional regulator
ABBFA_RS11340	COG0038	chloride channel
ABBFA_RS11345	COG4770	biotin carboxylase activity
ABBFA_RS11365	COG1914	H( )-stimulated, divalent metal cation uptake system
ABBFA_RS11370	COG0583	DNA-binding transcription factor activity
ABBFA_RS11390	COG3209	COG3209 Rhs family protein
ABBFA_RS11440	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABBFA_RS11460	COG2814	Major facilitator Superfamily
ABBFA_RS11475	COG1560	Kdo2-lipid A biosynthetic process
ABBFA_RS11485	COG5006	permease, DMT superfamily
ABBFA_RS11490	COG1522	sequence-specific DNA binding
ABBFA_RS11505	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABBFA_RS11515	COG4122	O-methyltransferase activity
ABBFA_RS11545	COG1538	Outer membrane efflux protein
ABBFA_RS11550	COG1137	ATPase activity
ABBFA_RS11555	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ABBFA_RS11565	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABBFA_RS11625	COG5434	Belongs to the glycosyl hydrolase 28 family
ABBFA_RS11645	COG3566	protein conserved in bacteria
ABBFA_RS11665	COG3567	Phage-associated protein, HI1409 family
ABBFA_RS11670	COG5410	chromosome segregation
ABBFA_RS11745	COG2814	Major facilitator Superfamily
ABBFA_RS11785	COG1278	Cold shock
ABBFA_RS11790	COG1280	lysine exporter protein (LysE YggA)
ABBFA_RS11825	COG1570	exodeoxyribonuclease VII activity
ABBFA_RS11880	COG0583	DNA-binding transcription factor activity
ABBFA_RS11885	COG4638	Rieske (2fe-2S)
ABBFA_RS11890	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABBFA_RS11895	COG0543	2 iron, 2 sulfur cluster binding
ABBFA_RS11895	COG0633	Ferredoxin
ABBFA_RS11900	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS11905	COG3135	benzoate transporter
ABBFA_RS11910	COG2814	Major facilitator Superfamily
ABBFA_RS11925	COG1643	Atp-dependent helicase
ABBFA_RS11930	COG0450	alkyl hydroperoxide reductase
ABBFA_RS11940	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABBFA_RS11950	COG3634	alkyl hydroperoxide reductase activity
ABBFA_RS11970	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABBFA_RS11975	COG0625	glutathione transferase activity
ABBFA_RS11985	COG2885	chlorophyll binding
ABBFA_RS12020	COG0542	response to heat
ABBFA_RS12035	COG1765	OsmC-like protein
ABBFA_RS12045	COG0667	Aldo Keto reductase
ABBFA_RS12060	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABBFA_RS12070	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABBFA_RS12080	COG0527	aspartate kinase activity
ABBFA_RS12090	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABBFA_RS12100	COG3038	cytochrome b561
ABBFA_RS12105	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ABBFA_RS12110	COG2252	PERMEase
ABBFA_RS12120	COG2072	flavoprotein involved in K transport
ABBFA_RS12135	COG1741	Belongs to the pirin family
ABBFA_RS12140	COG1309	transcriptional regulator
ABBFA_RS12150	COG0300	oxidoreductase activity
ABBFA_RS12155	COG2072	flavoprotein involved in K transport
ABBFA_RS12160	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
ABBFA_RS12205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABBFA_RS12220	COG2814	Major facilitator Superfamily
ABBFA_RS12225	COG1024	Enoyl-CoA hydratase
ABBFA_RS12230	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS12240	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS12265	COG2186	Transcriptional regulator
ABBFA_RS12270	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS12280	COG4948	Mandelate Racemase Muconate Lactonizing
ABBFA_RS12285	COG2271	Major facilitator Superfamily
ABBFA_RS12290	COG2721	sulfolactate sulfo-lyase activity
ABBFA_RS12295	COG0697	spore germination
ABBFA_RS12325	COG1113	amino acid transport
ABBFA_RS12345	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS12365	COG0531	amino acid
ABBFA_RS12375	COG1113	amino acid transport
ABBFA_RS12415	COG3209	COG3209 Rhs family protein
ABBFA_RS12450	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABBFA_RS12450	COG1902	pentaerythritol trinitrate reductase activity
ABBFA_RS12460	COG3706	GGDEF domain
ABBFA_RS12460	COG5001	Diguanylate cyclase
ABBFA_RS12460	COG2203	Gaf domain
ABBFA_RS12460	COG4251	negative regulation of phosphorylation
ABBFA_RS12470	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABBFA_RS12525	COG4172	Belongs to the ABC transporter superfamily
ABBFA_RS12530	COG4239	(ABC) transporter, permease
ABBFA_RS12535	COG4174	ABC transporter (Permease)
ABBFA_RS12545	COG0741	lytic transglycosylase activity
ABBFA_RS12545	COG1388	LysM domain
ABBFA_RS12545	COG0741	lytic transglycosylase activity
ABBFA_RS12545	COG1388	LysM domain
ABBFA_RS12550	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABBFA_RS12590	COG0583	DNA-binding transcription factor activity
ABBFA_RS12595	COG1279	arginine transmembrane transporter activity
ABBFA_RS12615	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABBFA_RS12620	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABBFA_RS12625	COG0006	proline dipeptidase activity
ABBFA_RS12660	COG1278	Cold shock
ABBFA_RS12735	COG0739	heme binding
ABBFA_RS12940	COG0464	growth
ABBFA_RS13015	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABBFA_RS13045	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABBFA_RS13050	COG2878	Part of a membrane complex involved in electron transport
ABBFA_RS13055	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABBFA_RS13075	COG0768	penicillin binding
ABBFA_RS13080	COG0742	ribosomal rna small subunit methyltransferase
ABBFA_RS13095	COG0830	nickel cation binding
ABBFA_RS13105	COG0804	urea catabolic process
ABBFA_RS13145	COG1253	flavin adenine dinucleotide binding
ABBFA_RS13155	COG2851	Citrate transporter
ABBFA_RS13205	COG1773	rubredoxin
ABBFA_RS13210	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABBFA_RS13220	COG0583	DNA-binding transcription factor activity
ABBFA_RS13250	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABBFA_RS13255	COG4181	ATPase activity
ABBFA_RS13300	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABBFA_RS13320	COG0306	phosphate transporter
ABBFA_RS13330	COG3958	Transketolase
ABBFA_RS13335	COG3959	Transketolase, thiamine diphosphate binding domain
ABBFA_RS13340	COG2271	Major facilitator Superfamily
ABBFA_RS13345	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS13350	COG0583	DNA-binding transcription factor activity
ABBFA_RS13370	COG2223	nitrite transmembrane transporter activity
ABBFA_RS13375	COG2207	Transcriptional regulator
ABBFA_RS13380	COG2066	Belongs to the glutaminase family
ABBFA_RS13385	COG0242	peptide deformylase activity
ABBFA_RS13390	COG0477	Major facilitator Superfamily
ABBFA_RS13400	COG0028	Belongs to the TPP enzyme family
ABBFA_RS13415	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS13420	COG2267	carboxylic ester hydrolase activity
ABBFA_RS13430	COG2271	Major facilitator Superfamily
ABBFA_RS13435	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABBFA_RS13445	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS13465	COG1414	Transcriptional regulator
ABBFA_RS13480	COG1024	Enoyl-CoA hydratase
ABBFA_RS13490	COG1215	transferase activity, transferring glycosyl groups
ABBFA_RS13495	COG1649	PFAM Uncharacterised BCR, COG1649
ABBFA_RS13495	COG0726	polysaccharide deacetylase
ABBFA_RS13505	COG4681	YaeQ
ABBFA_RS13515	COG0523	cobalamin synthesis protein
ABBFA_RS13525	COG1607	acyl-coa hydrolase
ABBFA_RS13535	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABBFA_RS13540	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABBFA_RS13545	COG1309	transcriptional regulator
ABBFA_RS13570	COG2040	homocysteine
ABBFA_RS13575	COG0531	amino acid
ABBFA_RS13600	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABBFA_RS13605	COG0477	Major facilitator Superfamily
ABBFA_RS13625	COG0084	hydrolase, TatD family'
ABBFA_RS13655	COG0405	Gamma-glutamyltransferase
ABBFA_RS13660	COG2814	Major facilitator Superfamily
ABBFA_RS13670	COG2050	protein possibly involved in aromatic compounds catabolism
ABBFA_RS13685	COG1090	epimerase
ABBFA_RS13705	COG0420	3'-5' exonuclease activity
ABBFA_RS13730	COG0735	belongs to the Fur family
ABBFA_RS13735	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABBFA_RS13760	COG0121	glutamine amidotransferase
ABBFA_RS13775	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABBFA_RS13785	COG0210	DNA helicase
ABBFA_RS13790	COG2885	chlorophyll binding
ABBFA_RS13795	COG0204	Acyl-transferase
ABBFA_RS13810	COG2894	cell division
ABBFA_RS13825	COG1280	lysine exporter protein (LysE YggA)
ABBFA_RS13830	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABBFA_RS13830	COG1674	ftsk spoiiie
ABBFA_RS13835	COG0492	ferredoxin-NADP+ reductase activity
ABBFA_RS13840	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABBFA_RS13850	COG0456	acetyltransferase
ABBFA_RS13895	COG1981	membrane
ABBFA_RS13910	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABBFA_RS13910	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABBFA_RS13930	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS13940	COG0657	acetylesterase activity
ABBFA_RS13950	COG0473	3-isopropylmalate dehydrogenase activity
ABBFA_RS13955	COG0583	DNA-binding transcription factor activity
ABBFA_RS13975	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABBFA_RS14000	COG0564	pseudouridine synthase activity
ABBFA_RS14010	COG0358	DNA primase activity
ABBFA_RS14025	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABBFA_RS14055	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABBFA_RS14085	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABBFA_RS14095	COG0352	thiamine-phosphate diphosphorylase activity
ABBFA_RS14095	COG0351	phosphomethylpyrimidine kinase
ABBFA_RS14095	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABBFA_RS14100	COG1652	LysM domain
ABBFA_RS14125	COG1399	metal-binding, possibly nucleic acid-binding protein
ABBFA_RS14130	COG3101	peptidyl-lysine hydroxylation
ABBFA_RS14135	COG0009	L-threonylcarbamoyladenylate synthase
ABBFA_RS14140	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABBFA_RS14145	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABBFA_RS14160	COG4106	trans-aconitate 2-methyltransferase activity
ABBFA_RS14175	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABBFA_RS14175	COG0596	Alpha beta hydrolase
ABBFA_RS14175	COG2226	methyltransferase
ABBFA_RS14180	COG1877	trehalose-phosphatase activity
ABBFA_RS14185	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABBFA_RS14190	COG2223	nitrite transmembrane transporter activity
ABBFA_RS14210	COG1196	nuclear chromosome segregation
ABBFA_RS14220	COG0730	response to heat
ABBFA_RS14235	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABBFA_RS14245	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABBFA_RS14305	COG0489	protein tyrosine kinase activity
ABBFA_RS14315	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABBFA_RS14315	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABBFA_RS14345	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ABBFA_RS14350	COG2081	HI0933 family
ABBFA_RS14360	COG0668	transmembrane transport
ABBFA_RS14380	COG0583	DNA-binding transcription factor activity
ABBFA_RS14405	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABBFA_RS14410	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABBFA_RS14440	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ABBFA_RS14480	COG0745	RESPONSE REGULATOR receiver
ABBFA_RS14500	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABBFA_RS14510	COG0384	phenazine biosynthesis protein PhzF
ABBFA_RS14540	COG1309	transcriptional regulator
ABBFA_RS14550	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABBFA_RS14565	COG0583	DNA-binding transcription factor activity
ABBFA_RS14595	COG0583	DNA-binding transcription factor activity
ABBFA_RS14615	COG0583	DNA-binding transcription factor activity
ABBFA_RS14620	COG1053	succinate dehydrogenase
ABBFA_RS14630	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABBFA_RS14635	COG2814	Major facilitator Superfamily
ABBFA_RS14640	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS14645	COG0583	DNA-binding transcription factor activity
ABBFA_RS14650	COG1063	alcohol dehydrogenase
ABBFA_RS14685	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABBFA_RS14690	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABBFA_RS14695	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABBFA_RS14710	COG3667	copper resistance
ABBFA_RS14715	COG2132	Multicopper oxidase
ABBFA_RS14725	COG0561	phosphatase activity
ABBFA_RS14730	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABBFA_RS14740	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ABBFA_RS14755	COG1214	PFAM Peptidase M22, glycoprotease
ABBFA_RS14805	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABBFA_RS14815	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABBFA_RS14820	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABBFA_RS14825	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABBFA_RS14885	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABBFA_RS14895	COG1846	Transcriptional regulator
ABBFA_RS14900	COG1764	response to oxidative stress
ABBFA_RS14940	COG0037	tRNA processing
ABBFA_RS14950	COG0248	Ppx GppA phosphatase
ABBFA_RS14980	COG0072	phenylalanine-tRNA ligase activity
ABBFA_RS15015	COG1238	metal cluster binding
ABBFA_RS15020	COG0625	glutathione transferase activity
ABBFA_RS15035	COG0318	PFAM AMP-dependent synthetase and ligase
ABBFA_RS15040	COG3028	Belongs to the UPF0307 family
ABBFA_RS15045	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABBFA_RS15065	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABBFA_RS15070	COG0617	tRNA 3'-terminal CCA addition
ABBFA_RS15075	COG1555	photosystem II stabilization
ABBFA_RS15080	COG3956	TIGRFAM MazG family protein
ABBFA_RS15090	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABBFA_RS15110	COG5002	protein histidine kinase activity
ABBFA_RS15110	COG2205	protein histidine kinase activity
ABBFA_RS15110	COG0784	Response regulator, receiver
ABBFA_RS15115	COG1024	Enoyl-CoA hydratase
ABBFA_RS15120	COG2084	Dehydrogenase
ABBFA_RS15125	COG3622	Belongs to the hyi family
ABBFA_RS15155	COG0697	spore germination
ABBFA_RS15165	COG2814	Major facilitator Superfamily
ABBFA_RS15170	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABBFA_RS15180	COG0583	DNA-binding transcription factor activity
ABBFA_RS15190	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABBFA_RS15200	COG0084	hydrolase, TatD family'
ABBFA_RS15215	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABBFA_RS15250	COG0440	acetolactate synthase activity
ABBFA_RS15255	COG0028	Belongs to the TPP enzyme family
ABBFA_RS15280	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABBFA_RS15285	COG0577	efflux transmembrane transporter activity
ABBFA_RS15285	COG1136	(ABC) transporter
ABBFA_RS15290	COG1538	Outer membrane efflux protein
ABBFA_RS15305	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABBFA_RS15310	COG1162	GTPase activity
ABBFA_RS15320	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABBFA_RS15360	COG1426	Protein conserved in bacteria
ABBFA_RS15395	COG0793	Belongs to the peptidase S41A family
ABBFA_RS15410	COG2267	carboxylic ester hydrolase activity
ABBFA_RS15420	COG1012	belongs to the aldehyde dehydrogenase family
ABBFA_RS15425	COG3265	gluconokinase activity
ABBFA_RS15435	COG0800	Aldolase
ABBFA_RS15445	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABBFA_RS15450	COG0280	phosphate acetyltransferase
ABBFA_RS15450	COG0857	belongs to the CobB CobQ family
ABBFA_RS15455	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABBFA_RS15455	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABBFA_RS15475	COG0740	serine-type endopeptidase activity
ABBFA_RS15485	COG4774	siderophore transport
ABBFA_RS15495	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABBFA_RS15505	COG2813	Specifically methylates the guanine in position
ABBFA_RS15505	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABBFA_RS15605	COG0788	formyltetrahydrofolate deformylase activity
ABBFA_RS15630	COG4651	solute:proton antiporter activity
ABBFA_RS15630	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABBFA_RS15650	COG0724	RNA recognition motif
ABBFA_RS15655	COG0210	DNA helicase
ABBFA_RS15680	COG1733	regulation of RNA biosynthetic process
ABBFA_RS15690	COG2900	Belongs to the SlyX family
ABBFA_RS15695	COG0488	(ABC) transporter
ABBFA_RS15700	COG1280	lysine exporter protein (LysE YggA)
ABBFA_RS15705	COG1560	Kdo2-lipid A biosynthetic process
ABBFA_RS15715	COG1301	dicarboxylic acid transport
ABBFA_RS15770	COG0473	3-isopropylmalate dehydrogenase activity
ABBFA_RS15825	COG0583	DNA-binding transcription factor activity
ABBFA_RS15835	COG0625	glutathione transferase activity
ABBFA_RS15840	COG2378	regulation of single-species biofilm formation
ABBFA_RS15845	COG0546	phosphoglycolate phosphatase activity
ABBFA_RS15860	COG1530	ribonuclease E activity
ABBFA_RS15865	COG0318	PFAM AMP-dependent synthetase and ligase
ABBFA_RS15880	COG0583	DNA-binding transcription factor activity
ABBFA_RS15885	COG4221	oxidoreductase activity
ABBFA_RS15890	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABBFA_RS15900	COG0534	Mate efflux family protein
ABBFA_RS15915	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABBFA_RS15940	COG0493	'glutamate synthase
ABBFA_RS15940	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABBFA_RS15950	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABBFA_RS15955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABBFA_RS15970	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABBFA_RS15980	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ABBFA_RS15980	COG0644	oxidoreductase
ABBFA_RS15990	COG0425	Belongs to the sulfur carrier protein TusA family
ABBFA_RS15995	COG4535	Mg2 and Co2 transporter CorC
ABBFA_RS16005	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABBFA_RS16025	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABBFA_RS16030	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABBFA_RS16030	COG0475	glutathione-regulated potassium exporter activity
ABBFA_RS16045	COG0484	heat shock protein binding
ABBFA_RS16050	COG0789	Transcriptional regulator
ABBFA_RS16055	COG0598	Magnesium transport protein CorA
ABBFA_RS16070	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABBFA_RS16075	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABBFA_RS16080	COG1074	ATP-dependent DNA helicase activity
ABBFA_RS16085	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABBFA_RS16105	COG2226	methyltransferase
ABBFA_RS16125	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABBFA_RS16140	COG2111	Na H antiporter
ABBFA_RS16140	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABBFA_RS16145	COG1006	Multisubunit Na H antiporter MnhC subunit
ABBFA_RS16150	COG0651	ATP synthesis coupled electron transport
ABBFA_RS16155	COG1863	multisubunit Na H antiporter MnhE subunit
ABBFA_RS16160	COG2212	antiporter activity
ABBFA_RS16165	COG1320	monovalent cation:proton antiporter activity
ABBFA_RS16180	COG0195	Participates in both transcription termination and antitermination
ABBFA_RS16230	COG0237	dephospho-CoA kinase activity
ABBFA_RS16240	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABBFA_RS16255	COG0497	DNA recombination
ABBFA_RS16265	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABBFA_RS16295	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABBFA_RS16295	COG2169	Transcriptional regulator
ABBFA_RS16300	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABBFA_RS16360	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABBFA_RS16375	COG0326	Molecular chaperone. Has ATPase activity
ABBFA_RS16390	COG2056	Na+-H+ antiporter family
ABBFA_RS16490	COG0546	phosphoglycolate phosphatase activity
ABBFA_RS16495	COG1716	ATPase activity
ABBFA_RS16540	COG0181	hydroxymethylbilane synthase activity
ABBFA_RS16550	COG3275	phosphorelay sensor kinase activity
ABBFA_RS16570	COG1538	Outer membrane efflux protein
ABBFA_RS16575	COG0697	spore germination
ABBFA_RS16600	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABBFA_RS16605	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABBFA_RS16610	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABBFA_RS16615	COG0772	Belongs to the SEDS family
ABBFA_RS16640	COG4974	Belongs to the 'phage' integrase family
ABBFA_RS16645	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABBFA_RS16655	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABBFA_RS16665	COG2197	response regulator
ABBFA_RS16680	COG0793	Belongs to the peptidase S41A family
ABBFA_RS16685	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABBFA_RS16690	COG0795	lipopolysaccharide-transporting ATPase activity
ABBFA_RS16730	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABBFA_RS16730	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABBFA_RS16740	COG0004	ammonium transporteR
ABBFA_RS16745	COG0347	Belongs to the P(II) protein family
ABBFA_RS16755	COG0606	chelatase, subunit chli
ABBFA_RS16760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABBFA_RS16770	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABBFA_RS16785	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABBFA_RS16800	COG0318	PFAM AMP-dependent synthetase and ligase
ABBFA_RS16810	COG0477	Major facilitator Superfamily
ABBFA_RS16815	COG2860	membrane
ABBFA_RS16820	COG3012	SEC-C Motif Domain Protein
ABBFA_RS16825	COG1253	flavin adenine dinucleotide binding
ABBFA_RS16835	COG0477	Major facilitator Superfamily
ABBFA_RS16845	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABBFA_RS16880	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABBFA_RS16890	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABBFA_RS16925	COG1309	transcriptional regulator
ABBFA_RS16960	COG0758	DNA mediated transformation
ABBFA_RS16970	COG0697	spore germination
ABBFA_RS16975	COG1309	transcriptional regulator
ABBFA_RS16990	COG0386	Belongs to the glutathione peroxidase family
ABBFA_RS17055	COG1121	(ABC) transporter
ABBFA_RS17060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABBFA_RS17065	COG1280	lysine exporter protein (LysE YggA)
ABBFA_RS17070	COG2837	iron assimilation
ABBFA_RS17075	COG0281	malic enzyme
ABBFA_RS17120	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABBFA_RS17120	COG0519	Catalyzes the synthesis of GMP from XMP
ABBFA_RS17125	COG4399	Belongs to the UPF0754 family
ABBFA_RS17130	COG2259	Doxx family
ABBFA_RS17135	COG0586	Pfam SNARE associated Golgi protein
ABBFA_RS17150	COG1192	Involved in chromosome partitioning
ABBFA_RS17160	COG0271	Belongs to the BolA IbaG family
ABBFA_RS17180	COG2267	carboxylic ester hydrolase activity
ABBFA_RS17200	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABBFA_RS17200	COG3321	synthase
ABBFA_RS17200	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABBFA_RS17200	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
ABBFA_RS17205	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS17215	COG2197	response regulator
ABBFA_RS17225	COG3916	Acyl-homoserine-lactone synthase
ABBFA_RS17230	COG0477	Major facilitator Superfamily
ABBFA_RS17235	COG1024	Enoyl-CoA hydratase
ABBFA_RS17240	COG1024	Enoyl-CoA hydratase
ABBFA_RS17245	COG1960	acyl-CoA dehydrogenase activity
ABBFA_RS17250	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABBFA_RS17270	COG1113	amino acid transport
ABBFA_RS17275	COG1113	amino acid transport
ABBFA_RS17280	COG0251	oxidation-reduction process
ABBFA_RS17320	COG0564	pseudouridine synthase activity
ABBFA_RS17370	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABBFA_RS17385	COG1802	Transcriptional regulator
ABBFA_RS17390	COG1448	Aminotransferase
ABBFA_RS17395	COG0277	FAD linked oxidase domain protein
ABBFA_RS17405	COG2186	Transcriptional regulator
ABBFA_RS17415	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABBFA_RS17430	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABBFA_RS17440	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABBFA_RS17450	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABBFA_RS17455	COG0438	transferase activity, transferring glycosyl groups
ABBFA_RS17470	COG0438	transferase activity, transferring glycosyl groups
ABBFA_RS17485	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABBFA_RS17515	COG0728	peptidoglycan biosynthetic process
ABBFA_RS17520	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABBFA_RS17575	COG0546	phosphoglycolate phosphatase activity
ABBFA_RS17580	COG1028	Short-chain dehydrogenase reductase Sdr
ABBFA_RS17600	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABBFA_RS17605	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABBFA_RS17610	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABBFA_RS17615	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABBFA_RS17620	COG1116	anion transmembrane transporter activity
ABBFA_RS17625	COG1309	transcriptional regulator
ABBFA_RS17630	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABBFA_RS17645	COG0196	riboflavin kinase activity
ABBFA_RS17650	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABBFA_RS17660	COG1047	Peptidyl-prolyl cis-trans
ABBFA_RS17700	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABBFA_RS17705	COG0657	acetylesterase activity
ABBFA_RS17755	COG2951	lytic endotransglycosylase activity
ABBFA_RS17760	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABBFA_RS17780	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABBFA_RS17790	COG0671	phosphoesterase, PA-phosphatase related
ABBFA_RS17795	COG0861	Integral membrane protein TerC family
ABBFA_RS17805	COG0754	glutathionylspermidine amidase activity
ABBFA_RS17815	COG0402	S-adenosylhomocysteine deaminase activity
ABBFA_RS17830	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABBFA_RS17835	COG1230	cation diffusion facilitator family transporter
ABBFA_RS17850	COG0706	membrane insertase activity