IX88_RS00005 PF01694 Rhomboid family IX88_RS00030 PF01196 Ribosomal protein L17 IX88_RS00035 PF01000 RNA polymerase Rpb3/RpoA insert domain IX88_RS00035 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IX88_RS00035 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IX88_RS00040 PF00163 Ribosomal protein S4/S9 N-terminal domain IX88_RS00040 PF01479 S4 domain IX88_RS00045 PF00411 Ribosomal protein S11 IX88_RS00050 PF00416 Ribosomal protein S13/S18 IX88_RS00055 PF00444 Ribosomal protein L36 IX88_RS00060 PF00344 SecY translocase IX88_RS00065 PF00828 Ribosomal protein L18e/L15 IX88_RS00070 PF00327 Ribosomal protein L30p/L7e IX88_RS00075 PF00333 Ribosomal protein S5, N-terminal domain IX88_RS00075 PF03719 Ribosomal protein S5, C-terminal domain IX88_RS00080 PF00861 Ribosomal L18p/L5e family IX88_RS00085 PF00347 Ribosomal protein L6 IX88_RS00090 PF00410 Ribosomal protein S8 IX88_RS00095 PF00253 Ribosomal protein S14p/S29e IX88_RS00100 PF00281 Ribosomal protein L5 IX88_RS00100 PF00673 ribosomal L5P family C-terminus IX88_RS00105 PF00467 KOW motif IX88_RS00105 PF17136 IX88_RS00105 IX88_RS00110 PF00238 Ribosomal protein L14p/L23e IX88_RS00115 PF00366 Ribosomal protein S17 IX88_RS00120 PF00831 Ribosomal L29 protein IX88_RS00125 PF00252 Ribosomal protein L16p/L10e IX88_RS00130 PF00189 Ribosomal protein S3, C-terminal domain IX88_RS00130 PF07650 KH domain IX88_RS00135 PF00237 Ribosomal protein L22p/L17e IX88_RS00140 PF00203 Ribosomal protein S19 IX88_RS00145 PF00181 Ribosomal Proteins L2, RNA binding domain IX88_RS00145 PF03947 Ribosomal Proteins L2, C-terminal domain IX88_RS00150 PF00276 Ribosomal protein L23 IX88_RS00155 PF00573 Ribosomal protein L4/L1 family IX88_RS00160 PF00297 Ribosomal protein L3 IX88_RS00165 PF00338 Ribosomal protein S10p/S20e IX88_RS00170 PF00117 Glutamine amidotransferase class-I IX88_RS00175 PF01053 Cys/Met metabolism PLP-dependent enzyme IX88_RS00180 PF05872 IX88_RS00180 IX88_RS00185 PF00042 Globin IX88_RS00190 PF02082 Transcriptional regulator IX88_RS00195 PF01926 50S ribosome-binding GTPase IX88_RS00200 PF10118 IX88_RS00200 IX88_RS00205 PF00375 Sodium:dicarboxylate symporter family IX88_RS00210 PF13622 Thioesterase-like superfamily IX88_RS00215 PF01553 Acyltransferase IX88_RS00220 PF03480 Bacterial extracellular solute-binding protein, family 7 IX88_RS00225 PF13460 NADH(P)-binding IX88_RS00230 PF00270 DEAD/DEAH box helicase IX88_RS00230 PF00271 Helicase conserved C-terminal domain IX88_RS00230 PF17191 IX88_RS00230 IX88_RS00235 PF00156 Phosphoribosyl transferase domain IX88_RS00240 PF00293 NUDIX domain IX88_RS00245 PF03641 Possible lysine decarboxylase IX88_RS00250 PF01544 CorA-like Mg2+ transporter protein IX88_RS00255 PF13466 STAS domain IX88_RS00260 PF05494 Toluene tolerance, Ttg2 IX88_RS00265 PF02470 IX88_RS00265 IX88_RS00270 PF02405 IX88_RS00270 IX88_RS00275 PF00005 ABC transporter IX88_RS00285 PF00270 DEAD/DEAH box helicase IX88_RS00285 PF00271 Helicase conserved C-terminal domain IX88_RS00290 PF00459 Inositol monophosphatase family IX88_RS00295 PF02779 Transketolase, pyrimidine binding domain IX88_RS00295 PF02780 Transketolase, C-terminal domain IX88_RS00295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IX88_RS00300 PF00925 GTP cyclohydrolase II IX88_RS00305 PF01218 Coproporphyrinogen III oxidase IX88_RS00310 PF01488 Shikimate / quinate 5-dehydrogenase IX88_RS00310 PF08501 Shikimate dehydrogenase substrate binding domain IX88_RS00320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS00320 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS00320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS00320 PF12418 IX88_RS00320 IX88_RS00320 PF12806 IX88_RS00320 IX88_RS00330 PF04024 IX88_RS00330 IX88_RS00335 PF00571 CBS domain IX88_RS00335 PF04982 IX88_RS00335 IX88_RS00340 PF13566 IX88_RS00340 IX88_RS00350 PF07690 Major Facilitator Superfamily IX88_RS00355 PF02091 Glycyl-tRNA synthetase alpha subunit IX88_RS00360 PF02092 IX88_RS00360 IX88_RS00360 PF05746 DALR anticodon binding domain IX88_RS00370 PF00892 EamA-like transporter family IX88_RS00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS00375 PF03466 LysR substrate binding domain IX88_RS00390 PF00082 Subtilase family IX88_RS00405 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IX88_RS00410 PF04996 Succinylarginine dihydrolase IX88_RS00415 PF00171 Aldehyde dehydrogenase family IX88_RS00420 PF04958 Arginine N-succinyltransferase beta subunit IX88_RS00425 PF00202 Aminotransferase class-III IX88_RS00430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IX88_RS00430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IX88_RS00435 PF00324 Amino acid permease IX88_RS00445 PF08241 Methyltransferase domain IX88_RS00460 PF10107 IX88_RS00460 IX88_RS00465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX88_RS00470 PF01594 IX88_RS00470 IX88_RS00475 PF00080 Copper/zinc superoxide dismutase (SODC) IX88_RS00480 PF12805 IX88_RS00480 IX88_RS00480 PF13515 IX88_RS00480 IX88_RS00485 PF07690 Major Facilitator Superfamily IX88_RS00495 PF02525 Flavodoxin-like fold IX88_RS00500 PF03992 Antibiotic biosynthesis monooxygenase IX88_RS00510 PF01565 FAD binding domain IX88_RS00510 PF02913 FAD linked oxidases, C-terminal domain IX88_RS00515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX88_RS00515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX88_RS00520 PF00892 EamA-like transporter family IX88_RS00525 PF00892 EamA-like transporter family IX88_RS00530 PF01814 Hemerythrin HHE cation binding domain IX88_RS00535 PF01925 IX88_RS00535 IX88_RS00540 PF01509 TruB family pseudouridylate synthase (N terminal domain) IX88_RS00540 PF09157 Pseudouridine synthase II TruB, C-terminal IX88_RS00540 PF16198 IX88_RS00540 IX88_RS00545 PF03280 Proteobacterial lipase chaperone protein IX88_RS00550 PF00561 alpha/beta hydrolase fold IX88_RS00555 PF01245 Ribosomal protein L19 IX88_RS00560 PF01746 tRNA (Guanine-1)-methyltransferase IX88_RS00565 PF01782 RimM N-terminal domain IX88_RS00565 PF05239 PRC-barrel domain IX88_RS00570 PF00886 Ribosomal protein S16 IX88_RS00575 PF13544 IX88_RS00575 IX88_RS00575 PF16732 IX88_RS00575 IX88_RS00580 PF07963 Prokaryotic N-terminal methylation motif IX88_RS00580 PF16732 IX88_RS00580 IX88_RS00585 PF05567 Neisseria PilC beta-propeller domain IX88_RS00585 PF13519 von Willebrand factor type A domain IX88_RS00595 PF13544 IX88_RS00595 IX88_RS00595 PF16074 IX88_RS00595 IX88_RS00605 PF12019 Type II transport protein GspH IX88_RS00605 PF13633 Prokaryotic N-terminal methylation site IX88_RS00610 PF02401 LytB protein IX88_RS00615 PF00625 Guanylate kinase IX88_RS00620 PF01192 RNA polymerase Rpb6 IX88_RS00625 PF02824 TGS domain IX88_RS00625 PF13328 HD domain IX88_RS00630 PF01042 Endoribonuclease L-PSP IX88_RS00635 PF04324 BFD-like [2Fe-2S] binding domain IX88_RS00640 PF00210 Ferritin-like domain IX88_RS00645 PF04932 IX88_RS00645 IX88_RS00645 PF11846 IX88_RS00645 IX88_RS00645 PF15864 IX88_RS00645 IX88_RS00650 PF04932 IX88_RS00650 IX88_RS00655 PF00114 Pilin (bacterial filament) IX88_RS00655 PF13633 Prokaryotic N-terminal methylation site IX88_RS00660 PF04536 TLP18 IX88_RS00665 PF04536 TLP18 IX88_RS00670 PF04011 LemA family IX88_RS00675 PF10118 IX88_RS00675 IX88_RS00680 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS00680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IX88_RS00685 PF00310 Glutamine amidotransferases class-II IX88_RS00685 PF01493 GXGXG motif IX88_RS00685 PF01645 Conserved region in glutamate synthase IX88_RS00685 PF04898 Glutamate synthase central domain IX88_RS00695 PF01761 3-dehydroquinate synthase IX88_RS00700 PF01202 Shikimate kinase IX88_RS00705 PF00263 IX88_RS00705 IX88_RS00705 PF03958 Bacterial type II/III secretion system short domain IX88_RS00705 PF07660 Secretin and TonB N terminus short domain IX88_RS00705 PF11741 AMIN domain IX88_RS00710 PF04351 Pilus assembly protein, PilP IX88_RS00715 PF04350 Pilus assembly protein, PilO IX88_RS00720 PF05137 IX88_RS00720 IX88_RS00725 PF11104 Type IV pilus assembly protein PilM; IX88_RS00730 PF00905 Penicillin binding protein transpeptidase domain IX88_RS00730 PF00912 Transglycosylase IX88_RS00730 PF17092 IX88_RS00730 IX88_RS00735 PF08241 Methyltransferase domain IX88_RS00745 PF00953 Glycosyl transferase family 4 IX88_RS00750 PF01225 Mur ligase family, catalytic domain IX88_RS00750 PF02875 Mur ligase family, glutamate ligase domain IX88_RS00750 PF08245 Mur ligase middle domain IX88_RS00755 PF02875 Mur ligase family, glutamate ligase domain IX88_RS00755 PF08245 Mur ligase middle domain IX88_RS00760 PF00905 Penicillin binding protein transpeptidase domain IX88_RS00760 PF03717 Penicillin-binding Protein dimerisation domain IX88_RS00765 PF04999 IX88_RS00765 IX88_RS00770 PF01795 MraW methylase family IX88_RS00775 PF13531 Bacterial extracellular solute-binding protein IX88_RS00785 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX88_RS00800 PF00324 Amino acid permease IX88_RS00830 PF01545 Cation efflux family IX88_RS00835 PF00873 AcrB/AcrD/AcrF family IX88_RS00840 PF16576 IX88_RS00840 IX88_RS00845 PF02321 Outer membrane efflux protein IX88_RS00860 PF08238 Sel1 repeat IX88_RS00865 PF00005 ABC transporter IX88_RS00865 PF12848 ABC transporter IX88_RS00870 PF01053 Cys/Met metabolism PLP-dependent enzyme IX88_RS00875 PF00106 short chain dehydrogenase IX88_RS00880 PF00484 Carbonic anhydrase IX88_RS00880 PF00916 IX88_RS00880 IX88_RS00885 PF00575 S1 RNA binding domain IX88_RS00885 PF09371 Tex-like protein N-terminal domain IX88_RS00885 PF12836 Helix-hairpin-helix motif IX88_RS00885 PF16921 IX88_RS00885 IX88_RS00890 PF00072 Response regulator receiver domain IX88_RS00890 PF00486 Transcriptional regulatory protein, C terminal IX88_RS00895 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS00895 PF00672 HAMP domain IX88_RS00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS00900 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IX88_RS00900 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IX88_RS00905 PF00583 Acetyltransferase (GNAT) family IX88_RS00920 PF12568 Acetyltransferase (GNAT) domain IX88_RS00925 PF00475 Imidazoleglycerol-phosphate dehydratase IX88_RS00930 PF00117 Glutamine amidotransferase class-I IX88_RS00935 PF05656 IX88_RS00935 IX88_RS00940 PF01612 3'-5' exonuclease IX88_RS00945 PF00977 Histidine biosynthesis protein IX88_RS00950 PF00005 ABC transporter IX88_RS00950 PF00664 ABC transporter transmembrane region IX88_RS00955 PF01381 Helix-turn-helix IX88_RS00955 PF07883 Cupin domain IX88_RS00960 PF00892 EamA-like transporter family IX88_RS00970 PF00313 'Cold-shock' DNA-binding domain IX88_RS00970 PF06961 IX88_RS00970 IX88_RS00975 PF01636 Phosphotransferase enzyme family IX88_RS00980 PF00977 Histidine biosynthesis protein IX88_RS00990 PF12625 IX88_RS00990 IX88_RS00990 PF12833 Helix-turn-helix domain IX88_RS00995 PF00230 Major intrinsic protein IX88_RS01005 PF01810 IX88_RS01005 IX88_RS01010 PF01223 DNA/RNA non-specific endonuclease IX88_RS01020 PF02705 IX88_RS01020 IX88_RS01040 PF02525 Flavodoxin-like fold IX88_RS01045 PF01638 HxlR-like helix-turn-helix IX88_RS01055 PF13676 TIR domain IX88_RS01065 PF08861 IX88_RS01065 IX88_RS01075 PF00440 Bacterial regulatory proteins, tetR family IX88_RS01080 PF12833 Helix-turn-helix domain IX88_RS01085 PF00248 Aldo/keto reductase family IX88_RS01100 PF00892 EamA-like transporter family IX88_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS01105 PF03466 LysR substrate binding domain IX88_RS01110 PF07690 Major Facilitator Superfamily IX88_RS01120 PF01609 Transposase DDE domain IX88_RS01125 PF01609 Transposase DDE domain IX88_RS01130 PF04828 Glutathione-dependent formaldehyde-activating enzyme IX88_RS01135 PF13489 Methyltransferase domain IX88_RS01140 PF01593 Flavin containing amine oxidoreductase IX88_RS01145 PF02678 Pirin IX88_RS01145 PF05726 Pirin C-terminal cupin domain IX88_RS01150 PF00857 Isochorismatase family IX88_RS01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS01155 PF03466 LysR substrate binding domain IX88_RS01160 PF00171 Aldehyde dehydrogenase family IX88_RS01165 PF00202 Aminotransferase class-III IX88_RS01170 PF00155 Aminotransferase class I and II IX88_RS01170 PF00392 Bacterial regulatory proteins, gntR family IX88_RS01175 PF00324 Amino acid permease IX88_RS01180 PF01381 Helix-turn-helix IX88_RS01180 PF07883 Cupin domain IX88_RS01185 PF03591 IX88_RS01185 IX88_RS01190 PF05437 IX88_RS01190 IX88_RS01195 PF00436 Single-strand binding protein family IX88_RS01200 PF07690 Major Facilitator Superfamily IX88_RS01205 PF04332 IX88_RS01205 IX88_RS01210 PF03070 TENA/THI-4/PQQC family IX88_RS01215 PF06942 IX88_RS01215 IX88_RS01220 PF06993 IX88_RS01220 IX88_RS01225 PF00107 Zinc-binding dehydrogenase IX88_RS01225 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS01230 PF00440 Bacterial regulatory proteins, tetR family IX88_RS01230 PF16925 IX88_RS01230 IX88_RS01235 PF00005 ABC transporter IX88_RS01240 PF00990 GGDEF domain IX88_RS01245 PF16956 IX88_RS01245 IX88_RS01250 PF02028 BCCT family transporter IX88_RS01255 PF07885 Ion channel IX88_RS01260 PF00474 Sodium:solute symporter family IX88_RS01265 PF04341 IX88_RS01265 IX88_RS01270 PF00072 Response regulator receiver domain IX88_RS01270 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS01270 PF12860 IX88_RS01270 IX88_RS01280 PF00072 Response regulator receiver domain IX88_RS01280 PF00196 Bacterial regulatory proteins, luxR family IX88_RS01285 PF03358 NADPH-dependent FMN reductase IX88_RS01290 PF00296 Luciferase-like monooxygenase IX88_RS01295 PF13412 Winged helix-turn-helix DNA-binding IX88_RS01300 PF00857 Isochorismatase family IX88_RS01305 PF00501 AMP-binding enzyme IX88_RS01305 PF13193 AMP-binding enzyme C-terminal domain IX88_RS01305 PF16177 IX88_RS01305 IX88_RS01310 PF05656 IX88_RS01310 IX88_RS01315 PF00924 Mechanosensitive ion channel IX88_RS01320 PF04452 RNA methyltransferase IX88_RS01325 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IX88_RS01330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX88_RS01335 PF12840 Helix-turn-helix domain IX88_RS01340 PF00472 RF-1 domain IX88_RS01340 PF03462 PCRF domain IX88_RS01345 PF16956 IX88_RS01345 IX88_RS01350 PF01368 DHH family IX88_RS01350 PF02272 DHHA1 domain IX88_RS01355 PF01243 Pyridoxamine 5'-phosphate oxidase IX88_RS01355 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IX88_RS01360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX88_RS01360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX88_RS01360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX88_RS01360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX88_RS01365 PF00478 IMP dehydrogenase / GMP reductase domain IX88_RS01365 PF00571 CBS domain IX88_RS01370 PF03692 IX88_RS01370 IX88_RS01375 PF00753 Metallo-beta-lactamase superfamily IX88_RS01380 PF00593 TonB dependent receptor IX88_RS01380 PF07715 TonB-dependent Receptor Plug Domain IX88_RS01385 PF01169 IX88_RS01385 IX88_RS01395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX88_RS01395 PF00364 Biotin-requiring enzyme IX88_RS01395 PF02817 e3 binding domain IX88_RS01400 PF00456 Transketolase, thiamine diphosphate binding domain IX88_RS01405 PF01551 Peptidase family M23 IX88_RS01410 PF05258 IX88_RS01410 IX88_RS01415 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IX88_RS01420 PF00091 Tubulin/FtsZ family, GTPase domain IX88_RS01420 PF12327 FtsZ family, C-terminal domain IX88_RS01425 PF02491 SHS2 domain inserted in FTSA IX88_RS01425 PF14450 Cell division protein FtsA IX88_RS01430 PF03799 Cell division protein FtsQ IX88_RS01430 PF08478 POTRA domain, FtsQ-type IX88_RS01435 PF01820 D-ala D-ala ligase N-terminus IX88_RS01435 PF07478 D-ala D-ala ligase C-terminus IX88_RS01440 PF01225 Mur ligase family, catalytic domain IX88_RS01440 PF02875 Mur ligase family, glutamate ligase domain IX88_RS01440 PF08245 Mur ligase middle domain IX88_RS01445 PF03033 Glycosyltransferase family 28 N-terminal domain IX88_RS01445 PF04101 Glycosyltransferase family 28 C-terminal domain IX88_RS01450 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IX88_RS01450 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IX88_RS01455 PF08410 IX88_RS01455 IX88_RS01460 PF00593 TonB dependent receptor IX88_RS01460 PF07715 TonB-dependent Receptor Plug Domain IX88_RS01465 PF00156 Phosphoribosyl transferase domain IX88_RS01470 PF03372 Endonuclease/Exonuclease/phosphatase family IX88_RS01475 PF03960 ArsC family IX88_RS01480 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) IX88_RS01485 PF07859 alpha/beta hydrolase fold IX88_RS01490 PF00990 GGDEF domain IX88_RS01495 PF00085 Thioredoxin IX88_RS01495 PF02683 IX88_RS01495 IX88_RS01495 PF11412 Disulphide bond corrector protein DsbC IX88_RS01500 PF13557 IX88_RS01500 IX88_RS01510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IX88_RS01515 PF01522 Polysaccharide deacetylase IX88_RS01520 PF09349 OHCU decarboxylase IX88_RS01525 PF00576 HIUase/Transthyretin family IX88_RS01530 PF00860 Permease family IX88_RS01535 PF03502 Nucleoside-specific channel-forming protein, Tsx IX88_RS01540 PF01494 FAD binding domain IX88_RS01545 PF03561 Allantoicase repeat IX88_RS01550 PF04115 Ureidoglycolate hydrolase IX88_RS01555 PF00204 DNA gyrase B IX88_RS01555 PF00986 DNA gyrase B subunit, carboxyl terminus IX88_RS01555 PF01751 Toprim domain IX88_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS01560 PF05728 Uncharacterised protein family (UPF0227) IX88_RS01565 PF07819 PGAP1-like protein IX88_RS01580 PF12710 haloacid dehalogenase-like hydrolase IX88_RS01600 PF07007 Protein of unknown function (DUF1311) IX88_RS01625 PF05954 Phage late control gene D protein (GPD) IX88_RS01625 PF10106 IX88_RS01625 IX88_RS01625 PF13296 IX88_RS01625 IX88_RS01630 PF02600 Disulfide bond formation protein DsbB IX88_RS01635 PF04262 Glutamate-cysteine ligase IX88_RS01640 PF06041 Bacterial protein of unknown function (DUF924) IX88_RS01650 PF04286 IX88_RS01650 IX88_RS01655 PF00155 Aminotransferase class I and II IX88_RS01660 PF01554 MatE IX88_RS01665 PF00106 short chain dehydrogenase IX88_RS01675 PF00072 Response regulator receiver domain IX88_RS01675 PF00486 Transcriptional regulatory protein, C terminal IX88_RS01680 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS01680 PF11808 IX88_RS01680 IX88_RS01680 PF13188 PAS domain IX88_RS01685 PF12146 Putative lysophospholipase IX88_RS01690 PF02666 IX88_RS01690 IX88_RS01695 PF00581 Rhodanese-like domain IX88_RS01700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IX88_RS01705 PF02580 D-Tyr-tRNA(Tyr) deacylase IX88_RS01720 PF12710 haloacid dehalogenase-like hydrolase IX88_RS01720 PF13740 ACT domain IX88_RS01730 PF00925 GTP cyclohydrolase II IX88_RS01730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IX88_RS01735 PF00885 6,7-dimethyl-8-ribityllumazine synthase IX88_RS01740 PF01029 NusB family IX88_RS01745 PF00586 AIR synthase related protein, N-terminal domain IX88_RS01745 PF02769 AIR synthase related protein, C-terminal domain IX88_RS01750 PF04608 Phosphatidylglycerophosphatase A IX88_RS01755 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS01755 PF12804 MobA-like NTP transferase domain IX88_RS01755 PF14602 Hexapeptide repeat of succinyl-transferase IX88_RS01760 PF01380 SIS domain IX88_RS01760 PF13522 Glutamine amidotransferase domain IX88_RS01765 PF01177 Asp/Glu/Hydantoin racemase IX88_RS01770 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS01775 PF05960 Bacterial protein of unknown function (DUF885) IX88_RS01780 PF00491 Arginase family IX88_RS01785 PF01979 Amidohydrolase family IX88_RS01790 PF00324 Amino acid permease IX88_RS01795 PF00221 Aromatic amino acid lyase IX88_RS01800 PF01175 Urocanase IX88_RS01805 PF05962 HutD IX88_RS01810 PF00392 Bacterial regulatory proteins, gntR family IX88_RS01810 PF07702 UTRA domain IX88_RS01815 PF01757 IX88_RS01815 IX88_RS01820 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX88_RS01820 PF07683 Cobalamin synthesis protein cobW C-terminal domain IX88_RS01825 PF08291 Peptidase M15 IX88_RS01830 PF00324 Amino acid permease IX88_RS01835 PF01557 Fumarylacetoacetate (FAA) hydrolase family IX88_RS01835 PF09298 Fumarylacetoacetase N-terminal IX88_RS01840 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS01840 PF14497 Glutathione S-transferase, C-terminal domain IX88_RS01845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX88_RS01850 PF01614 Bacterial transcriptional regulator IX88_RS01850 PF09339 IclR helix-turn-helix domain IX88_RS01855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX88_RS01855 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal IX88_RS01860 PF04463 IX88_RS01860 IX88_RS01865 PF01554 MatE IX88_RS01870 PF01758 Sodium Bile acid symporter family IX88_RS01875 PF00857 Isochorismatase family IX88_RS01880 PF00701 Dihydrodipicolinate synthetase family IX88_RS01890 PF01259 SAICAR synthetase IX88_RS01900 PF01226 Formate/nitrite transporter IX88_RS01905 PF00004 ATPase family associated with various cellular activities (AAA) IX88_RS01905 PF12002 MgsA AAA+ ATPase C terminal IX88_RS01905 PF16193 IX88_RS01905 IX88_RS01910 PF07995 Glucose / Sorbosone dehydrogenase IX88_RS01915 PF03692 IX88_RS01915 IX88_RS01920 PF07043 IX88_RS01920 IX88_RS01925 PF01738 Dienelactone hydrolase family IX88_RS01930 PF01230 HIT domain IX88_RS01935 PF00633 Helix-hairpin-helix motif IX88_RS01935 PF00730 HhH-GPD superfamily base excision DNA repair protein IX88_RS01935 PF14815 NUDIX domain IX88_RS01940 PF01551 Peptidase family M23 IX88_RS01950 PF03352 Methyladenine glycosylase IX88_RS01955 PF00107 Zinc-binding dehydrogenase IX88_RS01955 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS01960 PF00155 Aminotransferase class I and II IX88_RS01960 PF00392 Bacterial regulatory proteins, gntR family IX88_RS01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS01970 PF03466 LysR substrate binding domain IX88_RS01975 PF00248 Aldo/keto reductase family IX88_RS01980 PF07690 Major Facilitator Superfamily IX88_RS01985 PF01852 START domain IX88_RS01990 PF01113 Dihydrodipicolinate reductase, N-terminus IX88_RS01990 PF05173 Dihydrodipicolinate reductase, C-terminus IX88_RS02000 PF00226 DnaJ domain IX88_RS02000 PF00684 DnaJ central domain IX88_RS02000 PF01556 DnaJ C terminal domain IX88_RS02010 PF00873 AcrB/AcrD/AcrF family IX88_RS02015 PF16576 IX88_RS02015 IX88_RS02020 PF00440 Bacterial regulatory proteins, tetR family IX88_RS02020 PF14246 AefR-like transcriptional repressor, C-terminal region IX88_RS02025 PF00311 Phosphoenolpyruvate carboxylase IX88_RS02030 PF00860 Permease family IX88_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS02035 PF03466 LysR substrate binding domain IX88_RS02040 PF01925 IX88_RS02040 IX88_RS02050 PF00920 Dehydratase family IX88_RS02055 PF00551 Formyl transferase IX88_RS02055 PF02911 Formyl transferase, C-terminal domain IX88_RS02060 PF01029 NusB family IX88_RS02060 PF01189 NOL1/NOP2/sun family IX88_RS02060 PF17125 IX88_RS02060 IX88_RS02065 PF16951 IX88_RS02065 IX88_RS02070 PF00209 Sodium:neurotransmitter symporter family IX88_RS02080 PF00043 Glutathione S-transferase, C-terminal domain IX88_RS02080 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS02110 PF00579 tRNA synthetases class I (W and Y) IX88_RS02115 PF03702 Uncharacterised protein family (UPF0075) IX88_RS02120 PF00561 alpha/beta hydrolase fold IX88_RS02125 PF01521 Iron-sulphur cluster biosynthesis IX88_RS02145 PF00005 ABC transporter IX88_RS02145 PF12848 ABC transporter IX88_RS02150 PF09335 IX88_RS02150 IX88_RS02155 PF07361 Cytochrome b562 IX88_RS02160 PF00204 DNA gyrase B IX88_RS02160 PF00986 DNA gyrase B subunit, carboxyl terminus IX88_RS02160 PF01751 Toprim domain IX88_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS02165 PF02463 RecF/RecN/SMC N terminal domain IX88_RS02170 PF00712 DNA polymerase III beta subunit, N-terminal domain IX88_RS02170 PF02767 DNA polymerase III beta subunit, central domain IX88_RS02170 PF02768 DNA polymerase III beta subunit, C-terminal domain IX88_RS02175 PF00308 Bacterial dnaA protein IX88_RS02175 PF08299 Bacterial dnaA protein helix-turn-helix IX88_RS02175 PF11638 DnaA N-terminal domain IX88_RS02180 PF00468 Ribosomal protein L34 IX88_RS02185 PF00825 Ribonuclease P IX88_RS02190 PF01809 IX88_RS02190 IX88_RS02195 PF02096 60Kd inner membrane protein IX88_RS02195 PF14849 YidC periplasmic domain IX88_RS02200 PF01926 50S ribosome-binding GTPase IX88_RS02200 PF10396 GTP-binding protein TrmE N-terminus IX88_RS02200 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE IX88_RS02205 PF02583 Metal-sensitive transcriptional repressor IX88_RS02210 PF01545 Cation efflux family IX88_RS02215 PF10411 Disulfide bond isomerase protein N-terminus IX88_RS02215 PF13098 Thioredoxin-like domain IX88_RS02220 PF04226 IX88_RS02220 IX88_RS02225 PF00156 Phosphoribosyl transferase domain IX88_RS02235 PF01979 Amidohydrolase family IX88_RS02240 PF00355 Rieske [2Fe-2S] domain IX88_RS02245 PF03738 Glutathionylspermidine synthase preATP-grasp IX88_RS02255 PF03741 IX88_RS02255 IX88_RS02260 PF01569 PAP2 superfamily IX88_RS02265 PF06772 IX88_RS02265 IX88_RS02270 PF01225 Mur ligase family, catalytic domain IX88_RS02270 PF02875 Mur ligase family, glutamate ligase domain IX88_RS02270 PF08245 Mur ligase middle domain IX88_RS02275 PF04342 IX88_RS02275 IX88_RS02280 PF00731 AIR carboxylase IX88_RS02285 PF02222 ATP-grasp domain IX88_RS02290 PF01471 Putative peptidoglycan binding domain IX88_RS02290 PF13406 Transglycosylase SLT domain IX88_RS02300 PF00413 Matrixin IX88_RS02305 PF00413 Matrixin IX88_RS02310 PF00012 Hsp70 protein IX88_RS02315 PF01025 GrpE IX88_RS02320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS02320 PF03466 LysR substrate binding domain IX88_RS02340 PF07859 alpha/beta hydrolase fold IX88_RS02345 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IX88_RS02375 PF12796 Ankyrin repeats (3 copies) IX88_RS02380 PF03358 NADPH-dependent FMN reductase IX88_RS02385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX88_RS02390 PF01252 IX88_RS02390 IX88_RS02395 PF00133 tRNA synthetases class I (I, L, M and V) IX88_RS02395 PF06827 Zinc finger found in FPG and IleRS IX88_RS02395 PF08264 Anticodon-binding domain of tRNA IX88_RS02400 PF01687 Riboflavin kinase IX88_RS02400 PF06574 FAD synthetase IX88_RS02405 PF03595 Voltage-dependent anion channel IX88_RS02410 PF01048 Phosphorylase superfamily IX88_RS02415 PF00440 Bacterial regulatory proteins, tetR family IX88_RS02415 PF08362 YcdC-like protein, C-terminal region IX88_RS02420 PF00005 ABC transporter IX88_RS02425 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS02430 PF00296 Luciferase-like monooxygenase IX88_RS02435 PF13379 NMT1-like family IX88_RS02440 PF09084 NMT1/THI5 like IX88_RS02445 PF00583 Acetyltransferase (GNAT) family IX88_RS02445 PF00696 Amino acid kinase family IX88_RS02450 PF11776 Domain of unknown function (DUF3315) IX88_RS02455 PF11776 Domain of unknown function (DUF3315) IX88_RS02460 PF00106 short chain dehydrogenase IX88_RS02465 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS02470 PF13489 Methyltransferase domain IX88_RS02475 PF01323 DSBA-like thioredoxin domain IX88_RS02480 PF00440 Bacterial regulatory proteins, tetR family IX88_RS02485 PF00440 Bacterial regulatory proteins, tetR family IX88_RS02490 PF00175 Oxidoreductase NAD-binding domain IX88_RS02490 PF00970 Oxidoreductase FAD-binding domain IX88_RS02495 PF00487 IX88_RS02495 IX88_RS02500 PF01138 3' exoribonuclease family, domain 1 IX88_RS02500 PF03725 3' exoribonuclease family, domain 2 IX88_RS02505 PF04185 Phosphoesterase family IX88_RS02505 PF05506 IX88_RS02505 IX88_RS02515 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IX88_RS02515 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IX88_RS02520 PF01510 N-acetylmuramoyl-L-alanine amidase IX88_RS02525 PF03023 IX88_RS02525 IX88_RS02530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX88_RS02530 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX88_RS02535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX88_RS02535 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX88_RS02540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX88_RS02540 PF02706 Chain length determinant protein IX88_RS02540 PF13807 IX88_RS02540 IX88_RS02545 PF01451 Low molecular weight phosphotyrosine protein phosphatase IX88_RS02550 PF02563 Polysaccharide biosynthesis/export protein IX88_RS02555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IX88_RS02555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IX88_RS02555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IX88_RS02560 PF01943 IX88_RS02560 IX88_RS02560 PF14667 Polysaccharide biosynthesis C-terminal domain IX88_RS02565 PF00535 Glycosyl transferase family 2 IX88_RS02570 PF00534 Glycosyl transferases group 1 IX88_RS02570 PF13439 Glycosyltransferase Family 4 IX88_RS02575 PF14296 IX88_RS02575 IX88_RS02580 PF00534 Glycosyl transferases group 1 IX88_RS02580 PF13439 Glycosyltransferase Family 4 IX88_RS02585 PF00534 Glycosyl transferases group 1 IX88_RS02585 PF13477 Glycosyl transferase 4-like IX88_RS02590 PF02397 IX88_RS02590 IX88_RS02595 PF00483 Nucleotidyl transferase IX88_RS02600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IX88_RS02600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IX88_RS02605 PF00342 Phosphoglucose isomerase IX88_RS02610 PF16363 IX88_RS02610 IX88_RS02615 PF00884 Sulfatase IX88_RS02620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX88_RS02620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX88_RS02620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX88_RS02620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX88_RS02625 PF02652 IX88_RS02625 IX88_RS02630 PF00392 Bacterial regulatory proteins, gntR family IX88_RS02630 PF07729 FCD domain IX88_RS02635 PF01070 FMN-dependent dehydrogenase IX88_RS02640 PF01565 FAD binding domain IX88_RS02640 PF09330 D-lactate dehydrogenase, membrane binding IX88_RS02645 PF00155 Aminotransferase class I and II IX88_RS02650 PF00392 Bacterial regulatory proteins, gntR family IX88_RS02650 PF07729 FCD domain IX88_RS02655 PF13714 Phosphoenolpyruvate phosphomutase IX88_RS02660 PF00285 Citrate synthase IX88_RS02665 PF00330 Aconitase family (aconitate hydratase) IX88_RS02665 PF00694 Aconitase C-terminal domain IX88_RS02680 PF13548 IX88_RS02680 IX88_RS02690 PF13302 Acetyltransferase (GNAT) domain IX88_RS02700 PF16133 IX88_RS02700 IX88_RS02705 PF00106 short chain dehydrogenase IX88_RS02710 PF06210 IX88_RS02710 IX88_RS02715 PF00849 RNA pseudouridylate synthase IX88_RS02720 PF06877 Regulator of ribonuclease activity B IX88_RS02725 PF12680 SnoaL-like domain IX88_RS02730 PF00593 TonB dependent receptor IX88_RS02730 PF07715 TonB-dependent Receptor Plug Domain IX88_RS02735 PF07786 IX88_RS02735 IX88_RS02740 PF01037 AsnC family IX88_RS02740 PF13412 Winged helix-turn-helix DNA-binding IX88_RS02745 PF01266 FAD dependent oxidoreductase IX88_RS02750 PF00842 Alanine racemase, C-terminal domain IX88_RS02750 PF01168 Alanine racemase, N-terminal domain IX88_RS02755 PF01042 Endoribonuclease L-PSP IX88_RS02760 PF00324 Amino acid permease IX88_RS02765 PF00324 Amino acid permease IX88_RS02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS02770 PF03466 LysR substrate binding domain IX88_RS02775 PF00171 Aldehyde dehydrogenase family IX88_RS02780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX88_RS02780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX88_RS02785 PF00501 AMP-binding enzyme IX88_RS02785 PF13193 AMP-binding enzyme C-terminal domain IX88_RS02790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS02790 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS02790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS02795 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS02800 PF16113 IX88_RS02800 IX88_RS02805 PF07690 Major Facilitator Superfamily IX88_RS02810 PF00765 Autoinducer synthetase IX88_RS02815 PF16245 IX88_RS02815 IX88_RS02820 PF00196 Bacterial regulatory proteins, luxR family IX88_RS02820 PF03472 Autoinducer binding domain IX88_RS02825 PF00501 AMP-binding enzyme IX88_RS02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS02830 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS02835 PF00550 Phosphopantetheine attachment site IX88_RS02840 PF00501 AMP-binding enzyme IX88_RS02840 PF00550 Phosphopantetheine attachment site IX88_RS02840 PF00668 Condensation domain IX88_RS02840 PF00975 Thioesterase domain IX88_RS02840 PF13193 AMP-binding enzyme C-terminal domain IX88_RS02840 PF13745 HxxPF-repeated domain IX88_RS02845 PF03176 MMPL family IX88_RS02845 PF10604 Polyketide cyclase / dehydrase and lipid transport IX88_RS02845 PF17131 IX88_RS02845 IX88_RS02855 PF01370 NAD dependent epimerase/dehydratase family IX88_RS02855 PF12697 Alpha/beta hydrolase family IX88_RS02860 PF01648 4'-phosphopantetheinyl transferase superfamily IX88_RS02875 PF01722 BolA-like protein IX88_RS02880 PF04247 IX88_RS02880 IX88_RS02885 PF13614 AAA domain IX88_RS02895 PF01810 IX88_RS02895 IX88_RS02900 PF09335 IX88_RS02900 IX88_RS02905 PF07681 IX88_RS02905 IX88_RS02910 PF04286 IX88_RS02910 IX88_RS02915 PF00117 Glutamine amidotransferase class-I IX88_RS02915 PF00958 GMP synthase C terminal domain IX88_RS02915 PF02540 NAD synthase IX88_RS02920 PF01909 Nucleotidyltransferase domain IX88_RS02920 PF13427 IX88_RS02920 IX88_RS02925 PF03551 Transcriptional regulator PadR-like family IX88_RS02930 PF12977 Domain of Unknown Function with PDB structure (DUF3861) IX88_RS02935 PF02678 Pirin IX88_RS02935 PF05726 Pirin C-terminal cupin domain IX88_RS02940 PF02566 OsmC-like protein IX88_RS02945 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS02945 PF14497 Glutathione S-transferase, C-terminal domain IX88_RS02950 PF05036 Sporulation related domain IX88_RS02955 PF00750 tRNA synthetases class I (R) IX88_RS02955 PF03485 Arginyl tRNA synthetase N terminal domain IX88_RS02955 PF05746 DALR anticodon binding domain IX88_RS02960 PF00390 Malic enzyme, N-terminal domain IX88_RS02960 PF03949 Malic enzyme, NAD binding domain IX88_RS02965 PF04261 Dyp-type peroxidase family IX88_RS02970 PF01810 IX88_RS02970 IX88_RS02975 PF00950 IX88_RS02975 IX88_RS02980 PF00005 ABC transporter IX88_RS02985 PF01475 Ferric uptake regulator family IX88_RS02990 PF01297 Periplasmic solute binding protein family IX88_RS02995 PF03899 IX88_RS02995 IX88_RS03000 PF00119 ATP synthase A chain IX88_RS03005 PF00137 ATP synthase subunit C IX88_RS03010 PF00430 ATP synthase B/B' CF(0) IX88_RS03015 PF00213 ATP synthase delta (OSCP) subunit IX88_RS03020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX88_RS03020 PF00306 ATP synthase alpha/beta chain, C terminal domain IX88_RS03020 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX88_RS03025 PF00231 ATP synthase IX88_RS03030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX88_RS03030 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX88_RS03035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IX88_RS03045 PF00255 Glutathione peroxidase IX88_RS03050 PF12833 Helix-turn-helix domain IX88_RS03055 PF07690 Major Facilitator Superfamily IX88_RS03060 PF00440 Bacterial regulatory proteins, tetR family IX88_RS03065 PF00892 EamA-like transporter family IX88_RS03070 PF01300 Telomere recombination IX88_RS03075 PF02481 DNA recombination-mediator protein A IX88_RS03080 PF01476 LysM domain IX88_RS03085 PF01327 Polypeptide deformylase IX88_RS03090 PF11162 IX88_RS03090 IX88_RS03095 PF00593 TonB dependent receptor IX88_RS03095 PF07715 TonB-dependent Receptor Plug Domain IX88_RS03105 PF09995 IX88_RS03105 IX88_RS03110 PF00440 Bacterial regulatory proteins, tetR family IX88_RS03140 PF13527 Acetyltransferase (GNAT) domain IX88_RS03145 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS03150 PF01464 Transglycosylase SLT domain IX88_RS03155 PF03358 NADPH-dependent FMN reductase IX88_RS03160 PF11158 IX88_RS03160 IX88_RS03165 PF13411 MerR HTH family regulatory protein IX88_RS03170 PF13449 Esterase-like activity of phytase IX88_RS03175 PF04055 Radical SAM superfamily IX88_RS03175 PF08497 IX88_RS03175 IX88_RS03175 PF11842 IX88_RS03175 IX88_RS03180 PF10881 IX88_RS03180 IX88_RS03185 PF01042 Endoribonuclease L-PSP IX88_RS03190 PF00817 impB/mucB/samB family IX88_RS03190 PF11798 IMS family HHH motif IX88_RS03190 PF11799 impB/mucB/samB family C-terminal domain IX88_RS03195 PF01183 Glycosyl hydrolases family 25 IX88_RS03200 PF07690 Major Facilitator Superfamily IX88_RS03205 PF03641 Possible lysine decarboxylase IX88_RS03210 PF00571 CBS domain IX88_RS03210 PF03471 Transporter associated domain IX88_RS03210 PF03741 IX88_RS03210 IX88_RS03215 PF02810 SEC-C motif IX88_RS03220 PF03458 IX88_RS03220 IX88_RS03225 PF00083 Sugar (and other) transporter IX88_RS03230 PF00521 DNA gyrase/topoisomerase IV, subunit A IX88_RS03230 PF03989 DNA gyrase C-terminal domain, beta-propeller IX88_RS03235 PF00501 AMP-binding enzyme IX88_RS03235 PF13193 AMP-binding enzyme C-terminal domain IX88_RS03245 PF01124 MAPEG family IX88_RS03250 PF00719 Inorganic pyrophosphatase IX88_RS03255 PF03573 outer membrane porin, OprD family IX88_RS03260 PF09694 IX88_RS03260 IX88_RS03265 PF00701 Dihydrodipicolinate synthetase family IX88_RS03270 PF00596 Class II Aldolase and Adducin N-terminal domain IX88_RS03275 PF00155 Aminotransferase class I and II IX88_RS03275 PF00392 Bacterial regulatory proteins, gntR family IX88_RS03280 PF01078 Magnesium chelatase, subunit ChlI IX88_RS03280 PF13335 IX88_RS03280 IX88_RS03280 PF13541 Subunit ChlI of Mg-chelatase IX88_RS03285 PF04380 IX88_RS03285 IX88_RS03290 PF00543 Nitrogen regulatory protein P-II IX88_RS03295 PF00909 Ammonium Transporter Family IX88_RS03300 PF03477 ATP cone domain IX88_RS03305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX88_RS03305 PF01872 RibD C-terminal domain IX88_RS03310 PF02086 D12 class N6 adenine-specific DNA methyltransferase IX88_RS03315 PF00677 Lumazine binding domain IX88_RS03330 PF04364 DNA polymerase III chi subunit, HolC IX88_RS03335 PF00883 Cytosol aminopeptidase family, catalytic domain IX88_RS03335 PF02789 Cytosol aminopeptidase family, N-terminal domain IX88_RS03340 PF03739 IX88_RS03340 IX88_RS03345 PF03739 IX88_RS03345 IX88_RS03350 PF01676 Metalloenzyme superfamily IX88_RS03350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IX88_RS03355 PF03572 Peptidase family S41 IX88_RS03360 PF00072 Response regulator receiver domain IX88_RS03360 PF00158 Sigma-54 interaction domain IX88_RS03360 PF02954 Bacterial regulatory protein, Fis family IX88_RS03365 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS03365 PF00989 PAS fold IX88_RS03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS03370 PF00072 Response regulator receiver domain IX88_RS03370 PF00196 Bacterial regulatory proteins, luxR family IX88_RS03375 PF00768 D-alanyl-D-alanine carboxypeptidase IX88_RS03380 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS03385 PF00742 Homoserine dehydrogenase IX88_RS03385 PF01842 ACT domain IX88_RS03385 PF03447 Homoserine dehydrogenase, NAD binding domain IX88_RS03390 PF10411 Disulfide bond isomerase protein N-terminus IX88_RS03390 PF13098 Thioredoxin-like domain IX88_RS03395 PF00589 Phage integrase family IX88_RS03395 PF02899 Phage integrase, N-terminal SAM-like domain IX88_RS03400 PF04023 FeoA domain IX88_RS03405 PF02421 Ferrous iron transport protein B IX88_RS03405 PF07664 IX88_RS03405 IX88_RS03405 PF07670 Nucleoside recognition IX88_RS03415 PF02875 Mur ligase family, glutamate ligase domain IX88_RS03415 PF08245 Mur ligase middle domain IX88_RS03420 PF01098 IX88_RS03420 IX88_RS03425 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX88_RS03430 PF01258 Prokaryotic dksA/traR C4-type zinc finger IX88_RS03435 PF00149 Calcineurin-like phosphoesterase IX88_RS03440 PF00293 NUDIX domain IX88_RS03445 PF01964 ThiC family IX88_RS03445 PF13667 ThiC-associated domain IX88_RS03455 PF00440 Bacterial regulatory proteins, tetR family IX88_RS03460 PF00892 EamA-like transporter family IX88_RS03465 PF02321 Outer membrane efflux protein IX88_RS03470 PF01895 PhoU domain IX88_RS03475 PF04362 Bacterial Fe(2+) trafficking IX88_RS03480 PF00206 Lyase IX88_RS03480 PF14698 Argininosuccinate lyase C-terminal IX88_RS03485 PF06580 IX88_RS03485 IX88_RS03490 PF00072 Response regulator receiver domain IX88_RS03490 PF04397 LytTr DNA-binding domain IX88_RS03495 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IX88_RS03495 PF03900 Porphobilinogen deaminase, C-terminal domain IX88_RS03500 PF02602 Uroporphyrinogen-III synthase HemD IX88_RS03515 PF13279 Thioesterase-like superfamily IX88_RS03520 PF00816 H-NS histone family IX88_RS03525 PF01203 IX88_RS03525 IX88_RS03530 PF11356 Type IV pilus biogenesis IX88_RS03535 PF00263 IX88_RS03535 IX88_RS03535 PF03958 Bacterial type II/III secretion system short domain IX88_RS03540 PF00498 FHA domain IX88_RS03545 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS03550 PF00425 chorismate binding enzyme IX88_RS03550 PF04715 Anthranilate synthase component I, N terminal region IX88_RS03575 PF00009 Elongation factor Tu GTP binding domain IX88_RS03575 PF03143 Elongation factor Tu C-terminal domain IX88_RS03575 PF03144 Elongation factor Tu domain 2 IX88_RS03585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IX88_RS03590 PF02357 Transcription termination factor nusG IX88_RS03595 PF00298 Ribosomal protein L11, RNA binding domain IX88_RS03595 PF03946 Ribosomal protein L11, N-terminal domain IX88_RS03600 PF00687 Ribosomal protein L1p/L10e family IX88_RS03605 PF00466 Ribosomal protein L10 IX88_RS03610 PF00542 Ribosomal protein L7/L12 C-terminal domain IX88_RS03610 PF16320 IX88_RS03610 IX88_RS03615 PF00562 RNA polymerase Rpb2, domain 6 IX88_RS03615 PF04560 RNA polymerase Rpb2, domain 7 IX88_RS03615 PF04561 RNA polymerase Rpb2, domain 2 IX88_RS03615 PF04563 RNA polymerase beta subunit IX88_RS03615 PF04565 RNA polymerase Rpb2, domain 3 IX88_RS03615 PF10385 RNA polymerase beta subunit external 1 domain IX88_RS03620 PF00623 RNA polymerase Rpb1, domain 2 IX88_RS03620 PF04983 RNA polymerase Rpb1, domain 3 IX88_RS03620 PF04997 RNA polymerase Rpb1, domain 1 IX88_RS03620 PF04998 RNA polymerase Rpb1, domain 5 IX88_RS03620 PF05000 RNA polymerase Rpb1, domain 4 IX88_RS03630 PF13441 IX88_RS03630 IX88_RS03635 PF14539 Domain of unknown function (DUF4442) IX88_RS03640 PF01609 Transposase DDE domain IX88_RS03645 PF01609 Transposase DDE domain IX88_RS03650 PF01636 Phosphotransferase enzyme family IX88_RS03655 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IX88_RS03670 PF06412 IX88_RS03670 IX88_RS03675 PF01443 Viral (Superfamily 1) RNA helicase IX88_RS03675 PF03389 MobA/MobL family IX88_RS03675 PF13604 AAA domain IX88_RS03685 PF13610 IX88_RS03685 IX88_RS03690 PF04986 IX88_RS03690 IX88_RS03695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX88_RS03700 PF00809 Pterin binding enzyme IX88_RS03705 PF01609 Transposase DDE domain IX88_RS03710 PF01609 Transposase DDE domain IX88_RS03715 PF00561 alpha/beta hydrolase fold IX88_RS03720 PF03553 IX88_RS03720 IX88_RS03720 PF13726 IX88_RS03720 IX88_RS03725 PF03922 OmpW family IX88_RS03730 PF07007 Protein of unknown function (DUF1311) IX88_RS03735 PF00183 Hsp90 protein IX88_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS03750 PF01323 DSBA-like thioredoxin domain IX88_RS03760 PF13411 MerR HTH family regulatory protein IX88_RS03765 PF06821 Serine hydrolase IX88_RS03775 PF00108 Thiolase, N-terminal domain IX88_RS03775 PF02803 Thiolase, C-terminal domain IX88_RS03780 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS03780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX88_RS03780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX88_RS03785 PF05118 Aspartyl/Asparaginyl beta-hydroxylase IX88_RS03795 PF01541 GIY-YIG catalytic domain IX88_RS03795 PF02151 UvrB/uvrC motif IX88_RS03795 PF08459 UvrC Helix-hairpin-helix N-terminal IX88_RS03795 PF14520 Helix-hairpin-helix domain IX88_RS03800 PF13622 Thioesterase-like superfamily IX88_RS03805 PF01066 CDP-alcohol phosphatidyltransferase IX88_RS03810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IX88_RS03810 PF12833 Helix-turn-helix domain IX88_RS03815 PF13532 2OG-Fe(II) oxygenase superfamily IX88_RS03820 PF01614 Bacterial transcriptional regulator IX88_RS03825 PF04632 IX88_RS03825 IX88_RS03830 PF07869 IX88_RS03830 IX88_RS03835 PF13437 HlyD family secretion protein IX88_RS03835 PF13533 Biotin-lipoyl like IX88_RS03840 PF03652 Uncharacterised protein family (UPF0081) IX88_RS03845 PF02622 Uncharacterized ACR, COG1678 IX88_RS03850 PF02463 RecF/RecN/SMC N terminal domain IX88_RS03860 PF06865 Protein of unknown function (DUF1255) IX88_RS03865 PF00588 SpoU rRNA Methylase family IX88_RS03865 PF08032 RNA 2'-O ribose methyltransferase substrate binding IX88_RS03870 PF00892 EamA-like transporter family IX88_RS03875 PF01121 Dephospho-CoA kinase IX88_RS03880 PF01478 Type IV leader peptidase family IX88_RS03880 PF06750 IX88_RS03880 IX88_RS03885 PF00482 Type II secretion system (T2SS), protein F IX88_RS03890 PF00437 Type II/IV secretion system protein IX88_RS03890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IX88_RS03895 PF00121 Triosephosphate isomerase IX88_RS03900 PF03840 Preprotein translocase SecG subunit IX88_RS03920 PF02576 Uncharacterised BCR, YhbC family COG0779 IX88_RS03925 PF08529 NusA N-terminal domain IX88_RS03925 PF13184 NusA-like KH domain IX88_RS03925 PF14520 Helix-hairpin-helix domain IX88_RS03930 PF00009 Elongation factor Tu GTP binding domain IX88_RS03930 PF04760 Translation initiation factor IF-2, N-terminal region IX88_RS03930 PF08364 IX88_RS03930 IX88_RS03930 PF11987 Translation-initiation factor 2 IX88_RS03935 PF02033 Ribosome-binding factor A IX88_RS03940 PF03334 IX88_RS03940 IX88_RS03945 PF04066 IX88_RS03945 IX88_RS03950 PF01899 IX88_RS03950 IX88_RS03955 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains IX88_RS03960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IX88_RS03965 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains IX88_RS03965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IX88_RS03965 PF04039 IX88_RS03965 IX88_RS03965 PF13244 IX88_RS03965 IX88_RS03970 PF13476 AAA domain IX88_RS03975 PF00580 UvrD/REP helicase N-terminal domain IX88_RS03975 PF13361 UvrD-like helicase C-terminal domain IX88_RS03980 PF01502 Phosphoribosyl-AMP cyclohydrolase IX88_RS03980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IX88_RS03985 PF01494 FAD binding domain IX88_RS03990 PF03109 IX88_RS03990 IX88_RS04000 PF01209 ubiE/COQ5 methyltransferase family IX88_RS04010 PF03976 Polyphosphate kinase 2 (PPK2) IX88_RS04020 PF04257 Exodeoxyribonuclease V, gamma subunit IX88_RS04025 PF00580 UvrD/REP helicase N-terminal domain IX88_RS04025 PF12705 PD-(D/E)XK nuclease superfamily IX88_RS04025 PF13361 UvrD-like helicase C-terminal domain IX88_RS04030 PF13538 UvrD-like helicase C-terminal domain IX88_RS04030 PF13604 AAA domain IX88_RS04035 PF00144 Beta-lactamase IX88_RS04040 PF00312 Ribosomal protein S15 IX88_RS04045 PF00013 KH domain IX88_RS04045 PF00575 S1 RNA binding domain IX88_RS04045 PF01138 3' exoribonuclease family, domain 1 IX88_RS04045 PF03725 3' exoribonuclease family, domain 2 IX88_RS04045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IX88_RS04050 PF01544 CorA-like Mg2+ transporter protein IX88_RS04055 PF13591 MerR HTH family regulatory protein IX88_RS04060 PF00226 DnaJ domain IX88_RS04060 PF01556 DnaJ C terminal domain IX88_RS04065 PF01810 IX88_RS04065 IX88_RS04070 PF01430 Hsp33 protein IX88_RS04075 PF00999 Sodium/hydrogen exchanger family IX88_RS04075 PF02254 TrkA-N domain IX88_RS04080 PF00271 Helicase conserved C-terminal domain IX88_RS04080 PF04851 Type III restriction enzyme, res subunit IX88_RS04085 PF00482 Type II secretion system (T2SS), protein F IX88_RS04090 PF08334 Type II secretion system (T2SS), protein G IX88_RS04090 PF13544 IX88_RS04090 IX88_RS04100 PF01588 Putative tRNA binding domain IX88_RS04105 PF00795 Carbon-nitrogen hydrolase IX88_RS04110 PF00571 CBS domain IX88_RS04110 PF03471 Transporter associated domain IX88_RS04115 PF01206 Sulfurtransferase TusA IX88_RS04125 PF01946 Thi4 family IX88_RS04125 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase IX88_RS04130 PF06938 Protein of unknown function (DUF1285) IX88_RS04135 PF01177 Asp/Glu/Hydantoin racemase IX88_RS04140 PF13271 IX88_RS04140 IX88_RS04145 PF00762 Ferrochelatase IX88_RS04150 PF00753 Metallo-beta-lactamase superfamily IX88_RS04155 PF03884 Domain of unknown function (DUF329) IX88_RS04160 PF02390 Putative methyltransferase IX88_RS04165 PF03486 HI0933-like protein IX88_RS04170 PF04828 Glutathione-dependent formaldehyde-activating enzyme IX88_RS04175 PF02537 IX88_RS04175 IX88_RS04180 PF08888 HopJ type III effector protein IX88_RS04185 PF01197 Ribosomal protein L31 IX88_RS04190 PF03109 IX88_RS04190 IX88_RS04195 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS04195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS04195 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS04200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS04205 PF01554 MatE IX88_RS04210 PF04657 IX88_RS04210 IX88_RS04215 PF04055 Radical SAM superfamily IX88_RS04215 PF06969 HemN C-terminal domain IX88_RS04220 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS04225 PF03466 LysR substrate binding domain IX88_RS04240 PF00501 AMP-binding enzyme IX88_RS04240 PF13193 AMP-binding enzyme C-terminal domain IX88_RS04245 PF00575 S1 RNA binding domain IX88_RS04245 PF10150 Ribonuclease E/G family IX88_RS04250 PF00849 RNA pseudouridylate synthase IX88_RS04250 PF01479 S4 domain IX88_RS04255 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS04260 PF08279 HTH domain IX88_RS04260 PF13280 IX88_RS04260 IX88_RS04265 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS04265 PF14497 Glutathione S-transferase, C-terminal domain IX88_RS04270 PF07077 IX88_RS04270 IX88_RS04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS04275 PF03466 LysR substrate binding domain IX88_RS04280 PF12706 Beta-lactamase superfamily domain IX88_RS04285 PF00141 Peroxidase IX88_RS04290 PF00391 PEP-utilising enzyme, mobile domain IX88_RS04290 PF02896 PEP-utilising enzyme, TIM barrel domain IX88_RS04290 PF05524 PEP-utilising enzyme, N-terminal IX88_RS04290 PF13185 GAF domain IX88_RS04295 PF00293 NUDIX domain IX88_RS04300 PF12710 haloacid dehalogenase-like hydrolase IX88_RS04305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS04305 PF03466 LysR substrate binding domain IX88_RS04310 PF09834 IX88_RS04310 IX88_RS04315 PF00330 Aconitase family (aconitate hydratase) IX88_RS04320 PF00694 Aconitase C-terminal domain IX88_RS04330 PF00180 Isocitrate/isopropylmalate dehydrogenase IX88_RS04340 PF07007 Protein of unknown function (DUF1311) IX88_RS04345 PF01176 Translation initiation factor 1A / IF-1 IX88_RS04350 PF12625 IX88_RS04350 IX88_RS04350 PF12833 Helix-turn-helix domain IX88_RS04355 PF01416 tRNA pseudouridine synthase IX88_RS04360 PF00710 Asparaginase IX88_RS04375 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX88_RS04375 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX88_RS04380 PF03372 Endonuclease/Exonuclease/phosphatase family IX88_RS04385 PF00375 Sodium:dicarboxylate symporter family IX88_RS04390 PF00534 Glycosyl transferases group 1 IX88_RS04390 PF13439 Glycosyltransferase Family 4 IX88_RS04395 PF03279 IX88_RS04395 IX88_RS04400 PF01810 IX88_RS04400 IX88_RS04405 PF01757 IX88_RS04405 IX88_RS04410 PF00005 ABC transporter IX88_RS04410 PF12848 ABC transporter IX88_RS04410 PF16326 IX88_RS04410 IX88_RS04415 PF04102 SlyX IX88_RS04420 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS04420 PF13602 Zinc-binding dehydrogenase IX88_RS04425 PF01638 HxlR-like helix-turn-helix IX88_RS04435 PF01131 DNA topoisomerase IX88_RS04435 PF01396 IX88_RS04435 IX88_RS04435 PF01751 Toprim domain IX88_RS04435 PF08272 Topoisomerase I zinc-ribbon-like IX88_RS04445 PF03729 IX88_RS04445 IX88_RS04450 PF00580 UvrD/REP helicase N-terminal domain IX88_RS04450 PF13361 UvrD-like helicase C-terminal domain IX88_RS04455 PF00076 RNA recognition motif IX88_RS04475 PF00999 Sodium/hydrogen exchanger family IX88_RS04475 PF02254 TrkA-N domain IX88_RS04480 PF00471 Ribosomal protein L33 IX88_RS04485 PF00830 Ribosomal L28 family IX88_RS04490 PF00171 Aldehyde dehydrogenase family IX88_RS04495 PF00440 Bacterial regulatory proteins, tetR family IX88_RS04495 PF13972 Bacterial transcriptional repressor IX88_RS04500 PF00551 Formyl transferase IX88_RS04500 PF01842 ACT domain IX88_RS04505 PF03544 Gram-negative bacterial TonB protein C-terminal IX88_RS04510 PF01618 IX88_RS04510 IX88_RS04515 PF02472 Biopolymer transport protein ExbD/TolR IX88_RS04520 PF01625 Peptide methionine sulfoxide reductase IX88_RS04525 PF13387 IX88_RS04525 IX88_RS04530 PF00186 Dihydrofolate reductase IX88_RS04535 PF00303 Thymidylate synthase IX88_RS04550 PF01790 IX88_RS04550 IX88_RS04555 PF05742 IX88_RS04555 IX88_RS04560 PF05787 Bacterial protein of unknown function (DUF839) IX88_RS04565 PF05787 Bacterial protein of unknown function (DUF839) IX88_RS04570 PF00902 Sec-independent protein translocase protein (TatC) IX88_RS04575 PF02416 mttA/Hcf106 family IX88_RS04580 PF02416 mttA/Hcf106 family IX88_RS04590 PF01725 Ham1 family IX88_RS04595 PF08238 Sel1 repeat IX88_RS04600 PF07021 Methionine biosynthesis protein MetW IX88_RS04605 PF00561 alpha/beta hydrolase fold IX88_RS04610 PF00682 HMGL-like IX88_RS04610 PF08502 LeuA allosteric (dimerisation) domain IX88_RS04615 PF13640 2OG-Fe(II) oxygenase superfamily IX88_RS04620 PF00593 TonB dependent receptor IX88_RS04620 PF07715 TonB-dependent Receptor Plug Domain IX88_RS04625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX88_RS04625 PF05697 Bacterial trigger factor protein (TF) IX88_RS04625 PF05698 Bacterial trigger factor protein (TF) C-terminus IX88_RS04630 PF00574 Clp protease IX88_RS04635 PF06689 ClpX C4-type zinc finger IX88_RS04635 PF07724 AAA domain (Cdc48 subfamily) IX88_RS04635 PF10431 C-terminal, D2-small domain, of ClpB protein IX88_RS04640 PF11008 IX88_RS04640 IX88_RS04645 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) IX88_RS04650 PF05681 IX88_RS04650 IX88_RS04650 PF05683 Fumarase C-terminus IX88_RS04655 PF01515 Phosphate acetyl/butaryl transferase IX88_RS04655 PF07085 DRTGG domain IX88_RS04655 PF13500 AAA domain IX88_RS04660 PF00871 Acetokinase family IX88_RS04665 PF00920 Dehydratase family IX88_RS04670 PF01081 KDPG and KHG aldolase IX88_RS04675 PF02447 IX88_RS04675 IX88_RS04680 PF01202 Shikimate kinase IX88_RS04685 PF00171 Aldehyde dehydrogenase family IX88_RS04690 PF00171 Aldehyde dehydrogenase family IX88_RS04695 PF00561 alpha/beta hydrolase fold IX88_RS04700 PF04072 Leucine carboxyl methyltransferase IX88_RS04705 PF00933 Glycosyl hydrolase family 3 N terminal domain IX88_RS04710 PF00595 PDZ domain (Also known as DHR or GLGF) IX88_RS04710 PF03572 Peptidase family S41 IX88_RS04710 PF11818 IX88_RS04710 IX88_RS04715 PF00534 Glycosyl transferases group 1 IX88_RS04715 PF13439 Glycosyltransferase Family 4 IX88_RS04720 PF01569 PAP2 superfamily IX88_RS04725 PF04384 Iron-sulphur cluster assembly IX88_RS04730 PF00334 Nucleoside diphosphate kinase IX88_RS04735 PF04055 Radical SAM superfamily IX88_RS04740 PF13181 Tetratricopeptide repeat IX88_RS04740 PF13431 Tetratricopeptide repeat IX88_RS04740 PF13432 Tetratricopeptide repeat IX88_RS04745 PF13413 Helix-turn-helix domain IX88_RS04745 PF13464 IX88_RS04745 IX88_RS04750 PF04551 GcpE protein IX88_RS04755 PF03129 Anticodon binding domain IX88_RS04755 PF13393 Histidyl-tRNA synthetase IX88_RS04760 PF09976 Tetratricopeptide repeat IX88_RS04765 PF13360 PQQ-like domain IX88_RS04770 PF01926 50S ribosome-binding GTPase IX88_RS04770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IX88_RS04775 PF01648 4'-phosphopantetheinyl transferase superfamily IX88_RS04780 PF02556 Preprotein translocase subunit SecB IX88_RS04785 PF00462 Glutaredoxin IX88_RS04790 PF00581 Rhodanese-like domain IX88_RS04795 PF03193 Protein of unknown function, DUF258 IX88_RS04800 PF00929 Exonuclease IX88_RS04805 PF12811 IX88_RS04805 IX88_RS04810 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS04815 PF02321 Outer membrane efflux protein IX88_RS04820 PF00005 ABC transporter IX88_RS04820 PF02687 IX88_RS04820 IX88_RS04820 PF12704 MacB-like periplasmic core domain IX88_RS04825 PF16576 IX88_RS04825 IX88_RS04830 PF06144 DNA polymerase III, delta subunit IX88_RS04835 PF04390 Lipopolysaccharide-assembly IX88_RS04840 PF00133 tRNA synthetases class I (I, L, M and V) IX88_RS04840 PF08264 Anticodon-binding domain of tRNA IX88_RS04840 PF09334 tRNA synthetases class I (M) IX88_RS04840 PF13603 Leucyl-tRNA synthetase, Domain 2 IX88_RS04845 PF13511 IX88_RS04845 IX88_RS04850 PF00205 Thiamine pyrophosphate enzyme, central domain IX88_RS04850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX88_RS04850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX88_RS04855 PF10369 Small subunit of acetolactate synthase IX88_RS04855 PF13710 ACT domain IX88_RS04860 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IX88_RS04860 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain IX88_RS04865 PF00563 EAL domain IX88_RS04865 PF00990 GGDEF domain IX88_RS04870 PF01609 Transposase DDE domain IX88_RS04875 PF00563 EAL domain IX88_RS04880 PF00440 Bacterial regulatory proteins, tetR family IX88_RS04885 PF00440 Bacterial regulatory proteins, tetR family IX88_RS04895 PF00009 Elongation factor Tu GTP binding domain IX88_RS04895 PF16658 IX88_RS04895 IX88_RS04905 PF11738 Protein of unknown function (DUF3298) IX88_RS04910 PF01026 TatD related DNase IX88_RS04915 PF00330 Aconitase family (aconitate hydratase) IX88_RS04915 PF00694 Aconitase C-terminal domain IX88_RS04920 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease IX88_RS04925 PF00899 ThiF family IX88_RS04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS04930 PF03466 LysR substrate binding domain IX88_RS04940 PF01207 Dihydrouridine synthase (Dus) IX88_RS04955 PF13175 AAA ATPase domain IX88_RS04960 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IX88_RS04965 PF07690 Major Facilitator Superfamily IX88_RS04970 PF01042 Endoribonuclease L-PSP IX88_RS04975 PF00892 EamA-like transporter family IX88_RS04980 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IX88_RS04980 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IX88_RS04985 PF12769 Domain of unknown function (DUF3814) IX88_RS04990 PF02233 NAD(P) transhydrogenase beta subunit IX88_RS04995 PF00106 short chain dehydrogenase IX88_RS05000 PF02410 Oligomerisation domain IX88_RS05005 PF01261 Xylose isomerase-like TIM barrel IX88_RS05010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX88_RS05010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX88_RS05015 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS05020 PF00072 Response regulator receiver domain IX88_RS05020 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS05020 PF01627 Hpt domain IX88_RS05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS05025 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS05030 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB IX88_RS05035 PF05958 tRNA (Uracil-5-)-methyltransferase IX88_RS05040 PF02824 TGS domain IX88_RS05040 PF04607 Region found in RelA / SpoT proteins IX88_RS05040 PF13291 ACT domain IX88_RS05040 PF13328 HD domain IX88_RS05045 PF00106 short chain dehydrogenase IX88_RS05050 PF03819 MazG nucleotide pyrophosphohydrolase domain IX88_RS05055 PF12836 Helix-hairpin-helix motif IX88_RS05060 PF01743 Poly A polymerase head domain IX88_RS05060 PF12626 Polymerase A arginine-rich C-terminus IX88_RS05060 PF12627 Probable RNA and SrmB- binding site of polymerase A IX88_RS05065 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IX88_RS05070 PF02548 Ketopantoate hydroxymethyltransferase IX88_RS05075 PF02569 Pantoate-beta-alanine ligase IX88_RS05080 PF03668 IX88_RS05080 IX88_RS05085 PF00381 PTS HPr component phosphorylation site IX88_RS05090 PF04751 Protein of unknown function (DUF615) IX88_RS05095 PF00501 AMP-binding enzyme IX88_RS05095 PF13193 AMP-binding enzyme C-terminal domain IX88_RS05100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX88_RS05100 PF02824 TGS domain IX88_RS05100 PF03129 Anticodon binding domain IX88_RS05100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IX88_RS05105 PF00707 Translation initiation factor IF-3, C-terminal domain IX88_RS05105 PF05198 Translation initiation factor IF-3, N-terminal domain IX88_RS05110 PF00043 Glutathione S-transferase, C-terminal domain IX88_RS05110 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS05115 PF09335 IX88_RS05115 IX88_RS05120 PF05977 Transmembrane secretion effector IX88_RS05125 PF01632 Ribosomal protein L35 IX88_RS05130 PF00453 Ribosomal protein L20 IX88_RS05135 PF08719 Domain of unknown function (DUF1768) IX88_RS05140 PF13673 Acetyltransferase (GNAT) domain IX88_RS05150 PF01409 tRNA synthetases class II core domain (F) IX88_RS05150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IX88_RS05155 PF01588 Putative tRNA binding domain IX88_RS05155 PF03147 Ferredoxin-fold anticodon binding domain IX88_RS05155 PF03483 B3/4 domain IX88_RS05155 PF03484 tRNA synthetase B5 domain IX88_RS05160 PF00216 Bacterial DNA-binding protein IX88_RS05170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX88_RS05170 PF07497 Rho termination factor, RNA-binding domain IX88_RS05170 PF07498 Rho termination factor, N-terminal domain IX88_RS05175 PF00085 Thioredoxin IX88_RS05180 PF01966 HD domain IX88_RS05180 PF02541 Ppx/GppA phosphatase family IX88_RS05185 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IX88_RS05190 PF01171 PP-loop family IX88_RS05190 PF09179 TilS substrate binding domain IX88_RS05190 PF11734 TilS substrate C-terminal domain IX88_RS05195 PF03807 NADP oxidoreductase coenzyme F420-dependent IX88_RS05195 PF14748 Pyrroline-5-carboxylate reductase dimerisation IX88_RS05200 PF02325 IX88_RS05200 IX88_RS05205 PF00476 DNA polymerase family A IX88_RS05205 PF01367 5'-3' exonuclease, C-terminal SAM fold IX88_RS05205 PF01612 3'-5' exonuclease IX88_RS05205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IX88_RS05210 PF10101 IX88_RS05210 IX88_RS05215 PF00924 Mechanosensitive ion channel IX88_RS05225 PF00437 Type II/IV secretion system protein IX88_RS05230 PF02566 OsmC-like protein IX88_RS05235 PF01047 MarR family IX88_RS05240 PF16309 IX88_RS05240 IX88_RS05245 PF00795 Carbon-nitrogen hydrolase IX88_RS05250 PF01740 STAS domain IX88_RS05255 PF07228 Stage II sporulation protein E (SpoIIE) IX88_RS05260 PF04333 IX88_RS05260 IX88_RS05290 PF00309 IX88_RS05290 IX88_RS05290 PF04552 Sigma-54, DNA binding domain IX88_RS05290 PF04963 Sigma-54 factor, core binding domain IX88_RS05295 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IX88_RS05300 PF01722 BolA-like protein IX88_RS05305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IX88_RS05310 PF01634 ATP phosphoribosyltransferase IX88_RS05315 PF00815 Histidinol dehydrogenase IX88_RS05320 PF00155 Aminotransferase class I and II IX88_RS05325 PF00425 chorismate binding enzyme IX88_RS05325 PF04715 Anthranilate synthase component I, N terminal region IX88_RS05340 PF01609 Transposase DDE domain IX88_RS05345 PF01609 Transposase DDE domain IX88_RS05350 PF03412 Peptidase C39 family IX88_RS05360 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX88_RS05375 PF00293 NUDIX domain IX88_RS05375 PF14803 Nudix N-terminal IX88_RS05380 PF00293 NUDIX domain IX88_RS05385 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS05390 PF00814 Glycoprotease family IX88_RS05395 PF04445 Putative SAM-dependent methyltransferase IX88_RS05400 PF01650 Peptidase C13 family IX88_RS05405 PF00756 Putative esterase IX88_RS05410 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) IX88_RS05415 PF00834 Ribulose-phosphate 3 epimerase family IX88_RS05420 PF08282 haloacid dehalogenase-like hydrolase IX88_RS05430 PF00394 Multicopper oxidase IX88_RS05430 PF07731 Multicopper oxidase IX88_RS05430 PF07732 Multicopper oxidase IX88_RS05435 PF05275 IX88_RS05435 IX88_RS05440 PF01545 Cation efflux family IX88_RS05445 PF00893 Small Multidrug Resistance protein IX88_RS05450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IX88_RS05450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IX88_RS05455 PF01960 ArgJ family IX88_RS05460 PF02445 Quinolinate synthetase A protein IX88_RS05485 PF00962 Adenosine/AMP deaminase IX88_RS05490 PF00107 Zinc-binding dehydrogenase IX88_RS05490 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS05495 PF03466 LysR substrate binding domain IX88_RS05500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS05500 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS05500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS05505 PF07690 Major Facilitator Superfamily IX88_RS05510 PF02515 CoA-transferase family III IX88_RS05515 PF00440 Bacterial regulatory proteins, tetR family IX88_RS05520 PF04982 IX88_RS05520 IX88_RS05530 PF00890 FAD binding domain IX88_RS05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS05535 PF03466 LysR substrate binding domain IX88_RS05540 PF13531 Bacterial extracellular solute-binding protein IX88_RS05545 PF07690 Major Facilitator Superfamily IX88_RS05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS05550 PF03466 LysR substrate binding domain IX88_RS05555 PF01810 IX88_RS05555 IX88_RS05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS05560 PF03466 LysR substrate binding domain IX88_RS05565 PF08908 IX88_RS05565 IX88_RS05570 PF01717 Cobalamin-independent synthase, Catalytic domain IX88_RS05575 PF01613 Flavin reductase like domain IX88_RS05585 PF00440 Bacterial regulatory proteins, tetR family IX88_RS05600 PF08808 IX88_RS05600 IX88_RS05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS05620 PF03466 LysR substrate binding domain IX88_RS05625 PF02567 Phenazine biosynthesis-like protein IX88_RS05635 PF00268 Ribonucleotide reductase, small chain IX88_RS05645 PF00317 Ribonucleotide reductase, all-alpha domain IX88_RS05645 PF02867 Ribonucleotide reductase, barrel domain IX88_RS05645 PF03477 ATP cone domain IX88_RS05655 PF00072 Response regulator receiver domain IX88_RS05655 PF00486 Transcriptional regulatory protein, C terminal IX88_RS05660 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS05660 PF00672 HAMP domain IX88_RS05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS05670 PF00990 GGDEF domain IX88_RS05675 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IX88_RS05680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IX88_RS05685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IX88_RS05685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IX88_RS05690 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin IX88_RS05695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IX88_RS05695 PF10531 SLBB domain IX88_RS05695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IX88_RS05700 PF00384 Molybdopterin oxidoreductase IX88_RS05700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX88_RS05700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IX88_RS05700 PF13510 2Fe-2S iron-sulfur cluster binding domain IX88_RS05705 PF00146 NADH dehydrogenase IX88_RS05710 PF12838 4Fe-4S dicluster domain IX88_RS05715 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IX88_RS05720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IX88_RS05725 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains IX88_RS05725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IX88_RS05730 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains IX88_RS05735 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains IX88_RS05740 PF14681 Uracil phosphoribosyltransferase IX88_RS05745 PF00313 'Cold-shock' DNA-binding domain IX88_RS05750 PF05901 IX88_RS05750 IX88_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS05755 PF03466 LysR substrate binding domain IX88_RS05760 PF00175 Oxidoreductase NAD-binding domain IX88_RS05760 PF00970 Oxidoreductase FAD-binding domain IX88_RS05775 PF05552 Conserved TM helix IX88_RS05785 PF03486 HI0933-like protein IX88_RS05790 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS05795 PF13437 HlyD family secretion protein IX88_RS05795 PF13533 Biotin-lipoyl like IX88_RS05800 PF07690 Major Facilitator Superfamily IX88_RS05805 PF00440 Bacterial regulatory proteins, tetR family IX88_RS05810 PF01810 IX88_RS05810 IX88_RS05820 PF01588 Putative tRNA binding domain IX88_RS05820 PF08264 Anticodon-binding domain of tRNA IX88_RS05820 PF09334 tRNA synthetases class I (M) IX88_RS05830 PF10609 ParA/MinD ATPase like IX88_RS05835 PF01048 Phosphorylase superfamily IX88_RS05840 PF09835 IX88_RS05840 IX88_RS05845 PF01810 IX88_RS05845 IX88_RS05850 PF00692 dUTPase IX88_RS05880 PF01207 Dihydrouridine synthase (Dus) IX88_RS05885 PF01578 IX88_RS05885 IX88_RS05890 PF00448 SRP54-type protein, GTPase domain IX88_RS05890 PF02881 SRP54-type protein, helical bundle domain IX88_RS05890 PF02978 Signal peptide binding domain IX88_RS05895 PF03309 Type III pantothenate kinase IX88_RS05900 PF03099 Biotin/lipoate A/B protein ligase family IX88_RS05905 PF01925 IX88_RS05905 IX88_RS05910 PF00392 Bacterial regulatory proteins, gntR family IX88_RS05910 PF07729 FCD domain IX88_RS05915 PF02463 RecF/RecN/SMC N terminal domain IX88_RS05920 PF04354 ZipA, C-terminal FtsZ-binding domain IX88_RS05925 PF00533 BRCA1 C Terminus (BRCT) domain IX88_RS05925 PF01653 NAD-dependent DNA ligase adenylation domain IX88_RS05925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IX88_RS05925 PF03120 NAD-dependent DNA ligase OB-fold domain IX88_RS05925 PF12826 Helix-hairpin-helix motif IX88_RS05925 PF14520 Helix-hairpin-helix domain IX88_RS05930 PF00210 Ferritin-like domain IX88_RS05935 PF07690 Major Facilitator Superfamily IX88_RS05940 PF00982 Glycosyltransferase family 20 IX88_RS05945 PF02358 Trehalose-phosphatase IX88_RS05955 PF00202 Aminotransferase class-III IX88_RS05960 PF00155 Aminotransferase class I and II IX88_RS05965 PF13489 Methyltransferase domain IX88_RS05970 PF13500 AAA domain IX88_RS05975 PF00849 RNA pseudouridylate synthase IX88_RS05975 PF01479 S4 domain IX88_RS05980 PF04079 Putative transcriptional regulators (Ypuh-like) IX88_RS05985 PF02616 ScpA/B protein IX88_RS05990 PF01300 Telomere recombination IX88_RS05995 PF04315 IX88_RS05995 IX88_RS06000 PF02620 IX88_RS06000 IX88_RS06005 PF01783 Ribosomal L32p protein family IX88_RS06010 PF00698 Acyl transferase domain IX88_RS06015 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS06020 PF00550 Phosphopantetheine attachment site IX88_RS06025 PF01476 LysM domain IX88_RS06025 PF04972 BON domain IX88_RS06030 PF08543 Phosphomethylpyrimidine kinase IX88_RS06035 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS06040 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IX88_RS06045 PF09925 IX88_RS06045 IX88_RS06045 PF14351 IX88_RS06045 IX88_RS06050 PF14345 IX88_RS06050 IX88_RS06055 PF02261 Aspartate decarboxylase IX88_RS06060 PF01195 Peptidyl-tRNA hydrolase IX88_RS06065 PF01386 Ribosomal L25p family IX88_RS06070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IX88_RS06070 PF14572 Phosphoribosyl synthetase-associated domain IX88_RS06095 PF00288 GHMP kinases N terminal domain IX88_RS06095 PF08544 GHMP kinases C terminal IX88_RS06100 PF03550 Outer membrane lipoprotein LolB IX88_RS06105 PF13181 Tetratricopeptide repeat IX88_RS06105 PF13432 Tetratricopeptide repeat IX88_RS06105 PF14559 Tetratricopeptide repeat IX88_RS06110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IX88_RS06110 PF01488 Shikimate / quinate 5-dehydrogenase IX88_RS06110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IX88_RS06115 PF01807 CHC2 zinc finger IX88_RS06115 PF08275 DNA primase catalytic core, N-terminal domain IX88_RS06115 PF10410 DnaB-helicase binding domain of primase IX88_RS06115 PF13662 Toprim domain IX88_RS06120 PF13525 Outer membrane lipoprotein IX88_RS06125 PF00849 RNA pseudouridylate synthase IX88_RS06125 PF01479 S4 domain IX88_RS06130 PF02578 Multi-copper polyphenol oxidoreductase laccase IX88_RS06135 PF03358 NADPH-dependent FMN reductase IX88_RS06140 PF01668 SmpB protein IX88_RS06145 PF01467 Cytidylyltransferase IX88_RS06150 PF00037 4Fe-4S binding domain IX88_RS06160 PF07396 Phosphate-selective porin O and P IX88_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS06165 PF03466 LysR substrate binding domain IX88_RS06170 PF00180 Isocitrate/isopropylmalate dehydrogenase IX88_RS06175 PF02028 BCCT family transporter IX88_RS06180 PF07859 alpha/beta hydrolase fold IX88_RS06185 PF00355 Rieske [2Fe-2S] domain IX88_RS06185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IX88_RS06190 PF00171 Aldehyde dehydrogenase family IX88_RS06195 PF00111 2Fe-2S iron-sulfur cluster binding domain IX88_RS06195 PF00175 Oxidoreductase NAD-binding domain IX88_RS06195 PF00970 Oxidoreductase FAD-binding domain IX88_RS06210 PF00795 Carbon-nitrogen hydrolase IX88_RS06210 PF02540 NAD synthase IX88_RS06220 PF02678 Pirin IX88_RS06220 PF05726 Pirin C-terminal cupin domain IX88_RS06225 PF03653 IX88_RS06225 IX88_RS06230 PF00109 Beta-ketoacyl synthase, N-terminal domain IX88_RS06230 PF02801 Beta-ketoacyl synthase, C-terminal domain IX88_RS06235 PF12787 IX88_RS06235 IX88_RS06240 PF00164 Ribosomal protein S12/S23 IX88_RS06245 PF00177 Ribosomal protein S7p/S5e IX88_RS06250 PF00009 Elongation factor Tu GTP binding domain IX88_RS06250 PF00679 Elongation factor G C-terminus IX88_RS06250 PF03144 Elongation factor Tu domain 2 IX88_RS06250 PF03764 Elongation factor G, domain IV IX88_RS06250 PF14492 Elongation Factor G, domain II IX88_RS06255 PF00009 Elongation factor Tu GTP binding domain IX88_RS06255 PF03143 Elongation factor Tu C-terminal domain IX88_RS06255 PF03144 Elongation factor Tu domain 2 IX88_RS06260 PF10118 IX88_RS06260 IX88_RS06265 PF10118 IX88_RS06265 IX88_RS06270 PF13673 Acetyltransferase (GNAT) domain IX88_RS06275 PF04376 IX88_RS06275 IX88_RS06275 PF04377 IX88_RS06275 IX88_RS06280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IX88_RS06285 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS06290 PF01580 FtsK/SpoIIIE family IX88_RS06290 PF09397 Ftsk gamma domain IX88_RS06290 PF13491 IX88_RS06290 IX88_RS06295 PF01810 IX88_RS06295 IX88_RS06305 PF03776 Septum formation topological specificity factor MinE IX88_RS06310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX88_RS06315 PF03775 Septum formation inhibitor MinC, C-terminal domain IX88_RS06325 PF01553 Acyltransferase IX88_RS06330 PF00691 OmpA family IX88_RS06335 PF00580 UvrD/REP helicase N-terminal domain IX88_RS06335 PF13361 UvrD-like helicase C-terminal domain IX88_RS06340 PF00692 dUTPase IX88_RS06345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX88_RS06345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX88_RS06345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX88_RS06350 PF00696 Amino acid kinase family IX88_RS06355 PF13444 Acetyltransferase (GNAT) domain IX88_RS06360 PF13230 Glutamine amidotransferases class-II IX88_RS06365 PF01814 Hemerythrin HHE cation binding domain IX88_RS06375 PF03658 RnfH family Ubiquitin IX88_RS06380 PF04355 SmpA / OmlA family IX88_RS06385 PF01475 Ferric uptake regulator family IX88_RS06390 PF00437 Type II/IV secretion system protein IX88_RS06395 PF00437 Type II/IV secretion system protein IX88_RS06400 PF01168 Alanine racemase, N-terminal domain IX88_RS06405 PF13476 AAA domain IX88_RS06405 PF13558 Putative exonuclease SbcCD, C subunit IX88_RS06410 PF00149 Calcineurin-like phosphoesterase IX88_RS06410 PF12320 Type 5 capsule protein repressor C-terminal domain IX88_RS06415 PF02566 OsmC-like protein IX88_RS06430 PF01370 NAD dependent epimerase/dehydratase family IX88_RS06430 PF08338 Domain of unknown function (DUF1731) IX88_RS06435 PF01266 FAD dependent oxidoreductase IX88_RS06440 PF00490 Delta-aminolevulinic acid dehydratase IX88_RS06445 PF03061 Thioesterase superfamily IX88_RS06450 PF00529 HlyD family secretion protein IX88_RS06450 PF16576 IX88_RS06450 IX88_RS06455 PF07690 Major Facilitator Superfamily IX88_RS06460 PF01019 Gamma-glutamyltranspeptidase IX88_RS06465 PF02384 N-6 DNA Methylase IX88_RS06465 PF12161 HsdM N-terminal domain IX88_RS06475 PF13304 AAA domain IX88_RS06480 PF01420 Type I restriction modification DNA specificity domain IX88_RS06485 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IX88_RS06485 PF04851 Type III restriction enzyme, res subunit IX88_RS06485 PF08463 IX88_RS06485 IX88_RS06490 PF01844 HNH endonuclease IX88_RS06510 PF03573 outer membrane porin, OprD family IX88_RS06515 PF00083 Sugar (and other) transporter IX88_RS06520 PF00701 Dihydrodipicolinate synthetase family IX88_RS06525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS06525 PF03466 LysR substrate binding domain IX88_RS06535 PF06912 IX88_RS06535 IX88_RS06545 PF12697 Alpha/beta hydrolase family IX88_RS06550 PF13520 Amino acid permease IX88_RS06555 PF02574 Homocysteine S-methyltransferase IX88_RS06565 PF06039 IX88_RS06565 IX88_RS06570 PF00732 GMC oxidoreductase IX88_RS06570 PF05199 GMC oxidoreductase IX88_RS06575 PF00171 Aldehyde dehydrogenase family IX88_RS06580 PF00440 Bacterial regulatory proteins, tetR family IX88_RS06580 PF13977 Bacterial transcriptional repressor IX88_RS06585 PF02028 BCCT family transporter IX88_RS06590 PF02028 BCCT family transporter IX88_RS06595 PF01914 IX88_RS06595 IX88_RS06600 PF03061 Thioesterase superfamily IX88_RS06610 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX88_RS06615 PF00375 Sodium:dicarboxylate symporter family IX88_RS06620 PF07152 YaeQ protein IX88_RS06625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX88_RS06630 PF01522 Polysaccharide deacetylase IX88_RS06630 PF14883 Hypothetical glycosyl hydrolase family 13 IX88_RS06635 PF13641 Glycosyltransferase like family 2 IX88_RS06640 PF13994 IX88_RS06640 IX88_RS06645 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS06650 PF04973 IX88_RS06650 IX88_RS06660 PF01614 Bacterial transcriptional regulator IX88_RS06660 PF09339 IclR helix-turn-helix domain IX88_RS06665 PF00355 Rieske [2Fe-2S] domain IX88_RS06675 PF00355 Rieske [2Fe-2S] domain IX88_RS06680 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS06685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX88_RS06690 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS06690 PF14759 Reductase C-terminal IX88_RS06695 PF07690 Major Facilitator Superfamily IX88_RS06700 PF07883 Cupin domain IX88_RS06705 PF12697 Alpha/beta hydrolase family IX88_RS06710 PF00106 short chain dehydrogenase IX88_RS06715 PF01958 Domain of unknown function DUF108 IX88_RS06715 PF03447 Homoserine dehydrogenase, NAD binding domain IX88_RS06720 PF00171 Aldehyde dehydrogenase family IX88_RS06725 PF00205 Thiamine pyrophosphate enzyme, central domain IX88_RS06725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX88_RS06725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX88_RS06735 PF07690 Major Facilitator Superfamily IX88_RS06740 PF01327 Polypeptide deformylase IX88_RS06745 PF04960 Glutaminase IX88_RS06750 PF12833 Helix-turn-helix domain IX88_RS06755 PF07690 Major Facilitator Superfamily IX88_RS06760 PF01263 Aldose 1-epimerase IX88_RS06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS06770 PF03466 LysR substrate binding domain IX88_RS06775 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS06780 PF07690 Major Facilitator Superfamily IX88_RS06785 PF00456 Transketolase, thiamine diphosphate binding domain IX88_RS06790 PF02779 Transketolase, pyrimidine binding domain IX88_RS06790 PF02780 Transketolase, C-terminal domain IX88_RS06800 PF00809 Pterin binding enzyme IX88_RS06800 PF02310 B12 binding domain IX88_RS06800 PF02574 Homocysteine S-methyltransferase IX88_RS06800 PF02607 B12 binding domain IX88_RS06800 PF02965 Vitamin B12 dependent methionine synthase, activation domain IX88_RS06805 PF01384 IX88_RS06805 IX88_RS06810 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS06825 PF03781 Sulfatase-modifying factor enzyme 1 IX88_RS06830 PF00884 Sulfatase IX88_RS06835 PF01694 Rhomboid family IX88_RS06840 PF01106 NifU-like domain IX88_RS06840 PF01521 Iron-sulphur cluster biosynthesis IX88_RS06845 PF00593 TonB dependent receptor IX88_RS06845 PF07715 TonB-dependent Receptor Plug Domain IX88_RS06855 PF12697 Alpha/beta hydrolase family IX88_RS06860 PF00484 Carbonic anhydrase IX88_RS06865 PF13472 GDSL-like Lipase/Acylhydrolase family IX88_RS06870 PF00005 ABC transporter IX88_RS06875 PF02687 IX88_RS06875 IX88_RS06880 PF01694 Rhomboid family IX88_RS06885 PF00912 Transglycosylase IX88_RS06890 PF02503 Polyphosphate kinase middle domain IX88_RS06890 PF13089 Polyphosphate kinase N-terminal domain IX88_RS06890 PF13090 Polyphosphate kinase C-terminal domain IX88_RS06895 PF05036 Sporulation related domain IX88_RS06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS06900 PF03466 LysR substrate binding domain IX88_RS06905 PF00561 alpha/beta hydrolase fold IX88_RS06910 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS06915 PF00301 Rubredoxin IX88_RS06920 PF08327 Activator of Hsp90 ATPase homolog 1-like protein IX88_RS06925 PF05728 Uncharacterised protein family (UPF0227) IX88_RS06930 PF00152 tRNA synthetases class II (D, K and N) IX88_RS06930 PF01336 OB-fold nucleic acid binding domain IX88_RS06935 PF14052 Capsule assembly protein Wzi IX88_RS06940 PF01507 Phosphoadenosine phosphosulfate reductase family IX88_RS06945 PF00009 Elongation factor Tu GTP binding domain IX88_RS06950 PF09998 IX88_RS06950 IX88_RS06960 PF03600 Citrate transporter IX88_RS06965 PF00571 CBS domain IX88_RS06965 PF01595 IX88_RS06965 IX88_RS06965 PF03471 Transporter associated domain IX88_RS06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS06970 PF03466 LysR substrate binding domain IX88_RS06975 PF00463 Isocitrate lyase family IX88_RS06980 PF04170 NlpE N-terminal domain IX88_RS06990 PF01774 UreD urease accessory protein IX88_RS06995 PF00547 Urease, gamma subunit IX88_RS07000 PF00699 Urease beta subunit IX88_RS07005 PF00449 Urease alpha-subunit, N-terminal domain IX88_RS07005 PF01979 Amidohydrolase family IX88_RS07010 PF02814 UreE urease accessory protein, N-terminal domain IX88_RS07010 PF05194 UreE urease accessory protein, C-terminal domain IX88_RS07015 PF01730 UreF IX88_RS07020 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX88_RS07025 PF04955 IX88_RS07025 IX88_RS07030 PF03602 Conserved hypothetical protein 95 IX88_RS07035 PF00905 Penicillin binding protein transpeptidase domain IX88_RS07035 PF03717 Penicillin-binding Protein dimerisation domain IX88_RS07050 PF00406 Adenylate kinase IX88_RS07050 PF05191 Adenylate kinase, active site lid IX88_RS07055 PF00633 Helix-hairpin-helix motif IX88_RS07055 PF00730 HhH-GPD superfamily base excision DNA repair protein IX88_RS07055 PF10576 Iron-sulfur binding domain of endonuclease III IX88_RS07060 PF04060 Putative Fe-S cluster IX88_RS07060 PF14697 4Fe-4S dicluster domain IX88_RS07065 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IX88_RS07065 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IX88_RS07070 PF03724 META domain IX88_RS07070 PF14302 IX88_RS07070 IX88_RS07075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IX88_RS07080 PF02590 Predicted SPOUT methyltransferase IX88_RS07085 PF00004 ATPase family associated with various cellular activities (AAA) IX88_RS07085 PF02190 ATP-dependent protease La (LON) domain IX88_RS07085 PF05362 Lon protease (S16) C-terminal proteolytic domain IX88_RS07090 PF03895 YadA-like C-terminal region IX88_RS07090 PF05658 Head domain of trimeric autotransporter adhesin IX88_RS07090 PF05662 Coiled stalk of trimeric autotransporter adhesin IX88_RS07090 PF06669 IX88_RS07090 IX88_RS07090 PF13018 IX88_RS07090 IX88_RS07095 PF00691 OmpA family IX88_RS07095 PF04355 SmpA / OmlA family IX88_RS07100 PF03895 YadA-like C-terminal region IX88_RS07100 PF05658 Head domain of trimeric autotransporter adhesin IX88_RS07100 PF05662 Coiled stalk of trimeric autotransporter adhesin IX88_RS07100 PF06669 IX88_RS07100 IX88_RS07100 PF13018 IX88_RS07100 IX88_RS07105 PF00691 OmpA family IX88_RS07105 PF04355 SmpA / OmlA family IX88_RS07110 PF01812 5-formyltetrahydrofolate cyclo-ligase family IX88_RS07125 PF05164 Cell division protein ZapA IX88_RS07135 PF03695 Uncharacterised protein family (UPF0149) IX88_RS07140 PF00557 Metallopeptidase family M24 IX88_RS07140 PF05195 Aminopeptidase P, N-terminal domain IX88_RS07145 PF01494 FAD binding domain IX88_RS07150 PF01494 FAD binding domain IX88_RS07160 PF13411 MerR HTH family regulatory protein IX88_RS07165 PF01545 Cation efflux family IX88_RS07170 PF01810 IX88_RS07170 IX88_RS07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS07175 PF03466 LysR substrate binding domain IX88_RS07185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX88_RS07190 PF02021 Uncharacterised protein family UPF0102 IX88_RS07195 PF04972 BON domain IX88_RS07200 PF07859 alpha/beta hydrolase fold IX88_RS07205 PF00293 NUDIX domain IX88_RS07205 PF09297 NADH pyrophosphatase zinc ribbon domain IX88_RS07215 PF00075 RNase H IX88_RS07215 PF00929 Exonuclease IX88_RS07220 PF01464 Transglycosylase SLT domain IX88_RS07220 PF01476 LysM domain IX88_RS07225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX88_RS07230 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS07240 PF00005 ABC transporter IX88_RS07240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX88_RS07245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX88_RS07255 PF15569 IX88_RS07255 IX88_RS07260 PF00593 TonB dependent receptor IX88_RS07260 PF07715 TonB-dependent Receptor Plug Domain IX88_RS07270 PF00929 Exonuclease IX88_RS07275 PF01979 Amidohydrolase family IX88_RS07280 PF00990 GGDEF domain IX88_RS07285 PF00764 Arginosuccinate synthase IX88_RS07290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX88_RS07290 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS07300 PF00589 Phage integrase family IX88_RS07300 PF13356 Domain of unknown function (DUF4102) IX88_RS07310 PF05930 Prophage CP4-57 regulatory protein (AlpA) IX88_RS07315 PF11112 IX88_RS07315 IX88_RS07330 PF00872 IX88_RS07330 IX88_RS07335 PF11726 IX88_RS07335 IX88_RS07365 PF06067 IX88_RS07365 IX88_RS07370 PF09588 YqaJ-like viral recombinase domain IX88_RS07380 PF13411 MerR HTH family regulatory protein IX88_RS07385 PF00403 Heavy-metal-associated domain IX88_RS07385 PF01545 Cation efflux family IX88_RS07390 PF01252 IX88_RS07390 IX88_RS07395 PF14690 IX88_RS07395 IX88_RS07400 PF00376 MerR family regulatory protein IX88_RS07400 PF09278 MerR, DNA binding IX88_RS07405 PF02411 IX88_RS07405 IX88_RS07415 PF03203 IX88_RS07415 IX88_RS07420 PF00403 Heavy-metal-associated domain IX88_RS07420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX88_RS07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS07425 PF13411 MerR HTH family regulatory protein IX88_RS07430 PF01610 IX88_RS07430 IX88_RS07435 PF02661 Fic/DOC family IX88_RS07440 PF02384 N-6 DNA Methylase IX88_RS07440 PF12161 HsdM N-terminal domain IX88_RS07445 PF01420 Type I restriction modification DNA specificity domain IX88_RS07450 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IX88_RS07450 PF04851 Type III restriction enzyme, res subunit IX88_RS07455 PF09588 YqaJ-like viral recombinase domain IX88_RS07465 PF00440 Bacterial regulatory proteins, tetR family IX88_RS07470 PF05954 Phage late control gene D protein (GPD) IX88_RS07470 PF10106 IX88_RS07470 IX88_RS07470 PF13296 IX88_RS07470 IX88_RS07475 PF03180 NLPA lipoprotein IX88_RS07485 PF00440 Bacterial regulatory proteins, tetR family IX88_RS07495 PF05954 Phage late control gene D protein (GPD) IX88_RS07495 PF10106 IX88_RS07495 IX88_RS07495 PF13296 IX88_RS07495 IX88_RS07500 PF03527 IX88_RS07500 IX88_RS07500 PF05593 IX88_RS07500 IX88_RS07520 PF08238 Sel1 repeat IX88_RS07525 PF08238 Sel1 repeat IX88_RS07550 PF00324 Amino acid permease IX88_RS07555 PF01266 FAD dependent oxidoreductase IX88_RS07560 PF00324 Amino acid permease IX88_RS07565 PF02743 Cache domain IX88_RS07570 PF00392 Bacterial regulatory proteins, gntR family IX88_RS07570 PF07729 FCD domain IX88_RS07575 PF12680 SnoaL-like domain IX88_RS07580 PF00171 Aldehyde dehydrogenase family IX88_RS07585 PF01037 AsnC family IX88_RS07585 PF13404 AsnC-type helix-turn-helix domain IX88_RS07590 PF00202 Aminotransferase class-III IX88_RS07595 PF04958 Arginine N-succinyltransferase beta subunit IX88_RS07600 PF00324 Amino acid permease IX88_RS07605 PF00171 Aldehyde dehydrogenase family IX88_RS07610 PF12625 IX88_RS07610 IX88_RS07610 PF12833 Helix-turn-helix domain IX88_RS07615 PF00892 EamA-like transporter family IX88_RS07620 PF04295 IX88_RS07620 IX88_RS07620 PF08666 SAF domain IX88_RS07625 PF07690 Major Facilitator Superfamily IX88_RS07630 PF13378 Enolase C-terminal domain-like IX88_RS07635 PF00701 Dihydrodipicolinate synthetase family IX88_RS07640 PF00171 Aldehyde dehydrogenase family IX88_RS07645 PF00392 Bacterial regulatory proteins, gntR family IX88_RS07645 PF07729 FCD domain IX88_RS07650 PF07519 Tannase and feruloyl esterase IX88_RS07655 PF03061 Thioesterase superfamily IX88_RS07660 PF11578 Protein of unknown function (DUF3237) IX88_RS07665 PF03573 outer membrane porin, OprD family IX88_RS07670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS07670 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS07670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS07675 PF00501 AMP-binding enzyme IX88_RS07680 PF00171 Aldehyde dehydrogenase family IX88_RS07685 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS07690 PF07690 Major Facilitator Superfamily IX88_RS07695 PF01047 MarR family IX88_RS07700 PF00392 Bacterial regulatory proteins, gntR family IX88_RS07700 PF07729 FCD domain IX88_RS07705 PF00111 2Fe-2S iron-sulfur cluster binding domain IX88_RS07710 PF00355 Rieske [2Fe-2S] domain IX88_RS07715 PF07690 Major Facilitator Superfamily IX88_RS07720 PF03573 outer membrane porin, OprD family IX88_RS07725 PF00732 GMC oxidoreductase IX88_RS07725 PF05199 GMC oxidoreductase IX88_RS07730 PF07859 alpha/beta hydrolase fold IX88_RS07735 PF00106 short chain dehydrogenase IX88_RS07740 PF00743 Flavin-binding monooxygenase-like IX88_RS07745 PF12625 IX88_RS07745 IX88_RS07745 PF12833 Helix-turn-helix domain IX88_RS07750 PF04072 Leucine carboxyl methyltransferase IX88_RS07755 PF13738 Pyridine nucleotide-disulphide oxidoreductase IX88_RS07760 PF00106 short chain dehydrogenase IX88_RS07765 PF10118 IX88_RS07765 IX88_RS07770 PF00440 Bacterial regulatory proteins, tetR family IX88_RS07775 PF02678 Pirin IX88_RS07780 PF10118 IX88_RS07780 IX88_RS07785 PF00106 short chain dehydrogenase IX88_RS07790 PF00743 Flavin-binding monooxygenase-like IX88_RS07800 PF00860 Permease family IX88_RS07805 PF00962 Adenosine/AMP deaminase IX88_RS07810 PF01292 Prokaryotic cytochrome b561 IX88_RS07820 PF01351 Ribonuclease HII IX88_RS07825 PF02599 Global regulator protein family IX88_RS07830 PF00696 Amino acid kinase family IX88_RS07830 PF01842 ACT domain IX88_RS07830 PF13840 ACT domain IX88_RS07835 PF01411 tRNA synthetases class II (A) IX88_RS07835 PF02272 DHHA1 domain IX88_RS07835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IX88_RS07840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX88_RS07840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX88_RS07845 PF13393 Histidyl-tRNA synthetase IX88_RS07850 PF00709 Adenylosuccinate synthetase IX88_RS07860 PF01435 Peptidase family M48 IX88_RS07865 PF00248 Aldo/keto reductase family IX88_RS07870 PF00027 Cyclic nucleotide-binding domain IX88_RS07870 PF00325 Bacterial regulatory proteins, crp family IX88_RS07875 PF02566 OsmC-like protein IX88_RS07880 PF00583 Acetyltransferase (GNAT) family IX88_RS07885 PF01551 Peptidase family M23 IX88_RS07890 PF00004 ATPase family associated with various cellular activities (AAA) IX88_RS07890 PF02861 Clp amino terminal domain IX88_RS07890 PF07724 AAA domain (Cdc48 subfamily) IX88_RS07890 PF10431 C-terminal, D2-small domain, of ClpB protein IX88_RS07895 PF02464 Competence-damaged protein IX88_RS07905 PF01170 Putative RNA methylase family UPF0020 IX88_RS07905 PF02926 THUMP domain IX88_RS07905 PF10672 S-adenosylmethionine-dependent methyltransferase IX88_RS07915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX88_RS07915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX88_RS07925 PF00691 OmpA family IX88_RS07930 PF03807 NADP oxidoreductase coenzyme F420-dependent IX88_RS07930 PF10728 Domain of unknown function (DUF2520) IX88_RS07935 PF00043 Glutathione S-transferase, C-terminal domain IX88_RS07935 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS07940 PF02390 Putative methyltransferase IX88_RS07945 PF00932 Lamin Tail Domain IX88_RS07945 PF03372 Endonuclease/Exonuclease/phosphatase family IX88_RS07950 PF00043 Glutathione S-transferase, C-terminal domain IX88_RS07950 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS07960 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS07960 PF13192 Thioredoxin domain IX88_RS07965 PF07866 Protein of unknown function (DUF1653) IX88_RS07970 PF01596 O-methyltransferase IX88_RS07975 PF13619 IX88_RS07975 IX88_RS07980 PF00578 AhpC/TSA family IX88_RS07980 PF10417 C-terminal domain of 1-Cys peroxiredoxin IX88_RS07985 PF00270 DEAD/DEAH box helicase IX88_RS07985 PF00271 Helicase conserved C-terminal domain IX88_RS07985 PF04408 Helicase associated domain (HA2) IX88_RS07985 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IX88_RS07985 PF11898 IX88_RS07985 IX88_RS07990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IX88_RS07990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IX88_RS07995 PF03573 outer membrane porin, OprD family IX88_RS08000 PF07690 Major Facilitator Superfamily IX88_RS08005 PF03594 IX88_RS08005 IX88_RS08010 PF00106 short chain dehydrogenase IX88_RS08015 PF00111 2Fe-2S iron-sulfur cluster binding domain IX88_RS08015 PF00175 Oxidoreductase NAD-binding domain IX88_RS08015 PF00970 Oxidoreductase FAD-binding domain IX88_RS08020 PF00866 Ring hydroxylating beta subunit IX88_RS08025 PF00355 Rieske [2Fe-2S] domain IX88_RS08025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IX88_RS08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08030 PF03466 LysR substrate binding domain IX88_RS08035 PF00403 Heavy-metal-associated domain IX88_RS08040 PF00122 E1-E2 ATPase IX88_RS08040 PF00403 Heavy-metal-associated domain IX88_RS08040 PF00702 haloacid dehalogenase-like hydrolase IX88_RS08045 PF00376 MerR family regulatory protein IX88_RS08045 PF09278 MerR, DNA binding IX88_RS08050 PF04828 Glutathione-dependent formaldehyde-activating enzyme IX88_RS08055 PF03860 Domain of Unknown Function (DUF326) IX88_RS08065 PF01810 IX88_RS08065 IX88_RS08075 PF02609 Exonuclease VII small subunit IX88_RS08080 PF02601 IX88_RS08080 IX88_RS08080 PF13742 IX88_RS08080 IX88_RS08095 PF00717 Peptidase S24-like IX88_RS08095 PF01381 Helix-turn-helix IX88_RS08110 PF05838 Glycosyl hydrolase 108 IX88_RS08110 PF09374 Predicted Peptidoglycan domain IX88_RS08115 PF01810 IX88_RS08115 IX88_RS08120 PF00313 'Cold-shock' DNA-binding domain IX88_RS08130 PF03807 NADP oxidoreductase coenzyme F420-dependent IX88_RS08130 PF14748 Pyrroline-5-carboxylate reductase dimerisation IX88_RS08145 PF04233 IX88_RS08145 IX88_RS08150 PF07690 Major Facilitator Superfamily IX88_RS08155 PF01638 HxlR-like helix-turn-helix IX88_RS08165 PF09374 Predicted Peptidoglycan domain IX88_RS08170 PF13628 IX88_RS08170 IX88_RS08190 PF01406 tRNA synthetases class I (C) catalytic domain IX88_RS08190 PF09190 DALR domain IX88_RS08195 PF00571 CBS domain IX88_RS08195 PF01380 SIS domain IX88_RS08200 PF08282 haloacid dehalogenase-like hydrolase IX88_RS08205 PF06835 Lipopolysaccharide-assembly, LptC-related IX88_RS08210 PF03968 OstA-like protein IX88_RS08215 PF00005 ABC transporter IX88_RS08215 PF12399 Branched-chain amino acid ATP-binding cassette transporter IX88_RS08220 PF02321 Outer membrane efflux protein IX88_RS08225 PF00005 ABC transporter IX88_RS08225 PF00664 ABC transporter transmembrane region IX88_RS08230 PF13437 HlyD family secretion protein IX88_RS08230 PF13533 Biotin-lipoyl like IX88_RS08235 PF01205 Uncharacterized protein family UPF0029 IX88_RS08235 PF09186 Domain of unknown function (DUF1949) IX88_RS08240 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS08240 PF14602 Hexapeptide repeat of succinyl-transferase IX88_RS08245 PF00582 Universal stress protein family IX88_RS08250 PF01596 O-methyltransferase IX88_RS08255 PF08291 Peptidase M15 IX88_RS08260 PF00037 4Fe-4S binding domain IX88_RS08260 PF11953 Domain of unknown function (DUF3470) IX88_RS08265 PF13673 Acetyltransferase (GNAT) domain IX88_RS08270 PF00488 MutS domain V IX88_RS08270 PF01624 MutS domain I IX88_RS08270 PF05188 MutS domain II IX88_RS08270 PF05190 MutS family domain IV IX88_RS08270 PF05192 MutS domain III IX88_RS08275 PF01037 AsnC family IX88_RS08275 PF13404 AsnC-type helix-turn-helix domain IX88_RS08280 PF00892 EamA-like transporter family IX88_RS08285 PF00563 EAL domain IX88_RS08290 PF03279 IX88_RS08290 IX88_RS08295 PF00440 Bacterial regulatory proteins, tetR family IX88_RS08300 PF07690 Major Facilitator Superfamily IX88_RS08305 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) IX88_RS08310 PF07739 TipAS antibiotic-recognition domain IX88_RS08310 PF13411 MerR HTH family regulatory protein IX88_RS08315 PF08856 IX88_RS08315 IX88_RS08320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX88_RS08320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX88_RS08335 PF13354 Beta-lactamase enzyme family IX88_RS08340 PF05954 Phage late control gene D protein (GPD) IX88_RS08340 PF10106 IX88_RS08340 IX88_RS08340 PF13296 IX88_RS08340 IX88_RS08345 PF03527 IX88_RS08345 IX88_RS08345 PF05593 IX88_RS08345 IX88_RS08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08370 PF03466 LysR substrate binding domain IX88_RS08375 PF01566 IX88_RS08375 IX88_RS08380 PF03746 LamB/YcsF family IX88_RS08385 PF07286 Protein of unknown function (DUF1445) IX88_RS08390 PF02626 Allophanate hydrolase subunit 2 IX88_RS08390 PF02682 Allophanate hydrolase subunit 1 IX88_RS08395 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain IX88_RS08395 PF00364 Biotin-requiring enzyme IX88_RS08395 PF02785 Biotin carboxylase C-terminal domain IX88_RS08395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX88_RS08400 PF00654 Voltage gated chloride channel IX88_RS08405 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IX88_RS08405 PF08479 POTRA domain, ShlB-type IX88_RS08410 PF04830 IX88_RS08410 IX88_RS08410 PF05860 haemagglutination activity domain IX88_RS08410 PF13018 IX88_RS08410 IX88_RS08430 PF13737 IX88_RS08430 IX88_RS08445 PF00440 Bacterial regulatory proteins, tetR family IX88_RS08455 PF12833 Helix-turn-helix domain IX88_RS08455 PF12852 Cupin IX88_RS08460 PF12697 Alpha/beta hydrolase family IX88_RS08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08465 PF03466 LysR substrate binding domain IX88_RS08470 PF02515 CoA-transferase family III IX88_RS08475 PF00682 HMGL-like IX88_RS08480 PF07690 Major Facilitator Superfamily IX88_RS08485 PF00199 Catalase IX88_RS08490 PF01292 Prokaryotic cytochrome b561 IX88_RS08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08495 PF03466 LysR substrate binding domain IX88_RS08500 PF02525 Flavodoxin-like fold IX88_RS08505 PF01614 Bacterial transcriptional regulator IX88_RS08505 PF09339 IclR helix-turn-helix domain IX88_RS08510 PF01494 FAD binding domain IX88_RS08515 PF00392 Bacterial regulatory proteins, gntR family IX88_RS08515 PF07702 UTRA domain IX88_RS08520 PF13343 Bacterial extracellular solute-binding protein IX88_RS08525 PF00005 ABC transporter IX88_RS08535 PF01266 FAD dependent oxidoreductase IX88_RS08540 PF00266 Aminotransferase class-V IX88_RS08545 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS08550 PF07690 Major Facilitator Superfamily IX88_RS08555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS08555 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS08555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS08560 PF02515 CoA-transferase family III IX88_RS08565 PF01614 Bacterial transcriptional regulator IX88_RS08565 PF09339 IclR helix-turn-helix domain IX88_RS08570 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS08575 PF03060 Nitronate monooxygenase IX88_RS08580 PF07690 Major Facilitator Superfamily IX88_RS08585 PF01614 Bacterial transcriptional regulator IX88_RS08585 PF09339 IclR helix-turn-helix domain IX88_RS08590 PF00108 Thiolase, N-terminal domain IX88_RS08590 PF02803 Thiolase, C-terminal domain IX88_RS08595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX88_RS08595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX88_RS08600 PF00106 short chain dehydrogenase IX88_RS08605 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS08610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS08610 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS08610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS08615 PF07690 Major Facilitator Superfamily IX88_RS08620 PF01144 Coenzyme A transferase IX88_RS08625 PF01144 Coenzyme A transferase IX88_RS08635 PF07690 Major Facilitator Superfamily IX88_RS08640 PF03061 Thioesterase superfamily IX88_RS08645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS08645 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS08645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS08645 PF12418 IX88_RS08645 IX88_RS08645 PF12806 IX88_RS08645 IX88_RS08650 PF13622 Thioesterase-like superfamily IX88_RS08655 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IX88_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08660 PF03466 LysR substrate binding domain IX88_RS08665 PF00682 HMGL-like IX88_RS08670 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain IX88_RS08670 PF00364 Biotin-requiring enzyme IX88_RS08670 PF02785 Biotin carboxylase C-terminal domain IX88_RS08670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX88_RS08675 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS08680 PF01039 Carboxyl transferase domain IX88_RS08685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS08685 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS08685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS08690 PF00440 Bacterial regulatory proteins, tetR family IX88_RS08695 PF00501 AMP-binding enzyme IX88_RS08695 PF13193 AMP-binding enzyme C-terminal domain IX88_RS08700 PF13649 Methyltransferase domain IX88_RS08710 PF13472 GDSL-like Lipase/Acylhydrolase family IX88_RS08715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08715 PF03466 LysR substrate binding domain IX88_RS08750 PF02464 Competence-damaged protein IX88_RS08755 PF14518 Iron-containing redox enzyme IX88_RS08760 PF00199 Catalase IX88_RS08760 PF06628 Catalase-related immune-responsive IX88_RS08765 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS08775 PF10685 IX88_RS08775 IX88_RS08785 PF00717 Peptidase S24-like IX88_RS08790 PF01810 IX88_RS08790 IX88_RS08795 PF01037 AsnC family IX88_RS08795 PF13412 Winged helix-turn-helix DNA-binding IX88_RS08805 PF00072 Response regulator receiver domain IX88_RS08805 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS08805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS08810 PF00072 Response regulator receiver domain IX88_RS08810 PF00196 Bacterial regulatory proteins, luxR family IX88_RS08815 PF14542 GCN5-related N-acetyl-transferase IX88_RS08820 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS08825 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS08830 PF00005 ABC transporter IX88_RS08835 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX88_RS08840 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX88_RS08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08845 PF03466 LysR substrate binding domain IX88_RS08850 PF01810 IX88_RS08850 IX88_RS08855 PF00266 Aminotransferase class-V IX88_RS08865 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS08865 PF06426 Serine acetyltransferase, N-terminal IX88_RS08870 PF00581 Rhodanese-like domain IX88_RS08875 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08880 PF03466 LysR substrate binding domain IX88_RS08885 PF00043 Glutathione S-transferase, C-terminal domain IX88_RS08885 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS08890 PF13417 Glutathione S-transferase, N-terminal domain IX88_RS08890 PF14834 Glutathione S-transferase, C-terminal domain IX88_RS08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08895 PF03466 LysR substrate binding domain IX88_RS08900 PF03788 IX88_RS08900 IX88_RS08905 PF04172 IX88_RS08905 IX88_RS08910 PF00155 Aminotransferase class I and II IX88_RS08910 PF00392 Bacterial regulatory proteins, gntR family IX88_RS08915 PF04299 Putative FMN-binding domain IX88_RS08920 PF13302 Acetyltransferase (GNAT) domain IX88_RS08925 PF07690 Major Facilitator Superfamily IX88_RS08930 PF12973 ChrR Cupin-like domain IX88_RS08935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08935 PF03466 LysR substrate binding domain IX88_RS08940 PF16957 IX88_RS08940 IX88_RS08945 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IX88_RS08950 PF06857 IX88_RS08950 IX88_RS08955 PF01039 Carboxyl transferase domain IX88_RS08960 PF06833 Malonate decarboxylase gamma subunit (MdcE) IX88_RS08965 PF10620 IX88_RS08965 IX88_RS08970 PF00698 Acyl transferase domain IX88_RS08975 PF03817 IX88_RS08975 IX88_RS08980 PF03818 IX88_RS08980 IX88_RS08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS08985 PF03466 LysR substrate binding domain IX88_RS08990 PF00155 Aminotransferase class I and II IX88_RS08990 PF00392 Bacterial regulatory proteins, gntR family IX88_RS09000 PF02322 IX88_RS09000 IX88_RS09005 PF01654 IX88_RS09005 IX88_RS09015 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS09020 PF00296 Luciferase-like monooxygenase IX88_RS09025 PF00083 Sugar (and other) transporter IX88_RS09035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IX88_RS09040 PF00005 ABC transporter IX88_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS09050 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IX88_RS09055 PF01177 Asp/Glu/Hydantoin racemase IX88_RS09060 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IX88_RS09065 PF00392 Bacterial regulatory proteins, gntR family IX88_RS09065 PF07729 FCD domain IX88_RS09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS09070 PF03466 LysR substrate binding domain IX88_RS09075 PF00857 Isochorismatase family IX88_RS09080 PF07969 Amidohydrolase family IX88_RS09085 PF07235 IX88_RS09085 IX88_RS09090 PF03960 ArsC family IX88_RS09095 PF01022 Bacterial regulatory protein, arsR family IX88_RS09100 PF01758 Sodium Bile acid symporter family IX88_RS09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS09105 PF03466 LysR substrate binding domain IX88_RS09110 PF02417 IX88_RS09110 IX88_RS09115 PF02417 IX88_RS09115 IX88_RS09120 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS09120 PF13192 Thioredoxin domain IX88_RS09135 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS09135 PF06426 Serine acetyltransferase, N-terminal IX88_RS09140 PF00588 SpoU rRNA Methylase family IX88_RS09145 PF02811 PHP domain IX88_RS09145 PF07733 Bacterial DNA polymerase III alpha subunit IX88_RS09145 PF14579 Helix-hairpin-helix motif IX88_RS09150 PF00710 Asparaginase IX88_RS09155 PF00375 Sodium:dicarboxylate symporter family IX88_RS09160 PF00155 Aminotransferase class I and II IX88_RS09165 PF01641 SelR domain IX88_RS09170 PF00255 Glutathione peroxidase IX88_RS09175 PF02311 AraC-like ligand binding domain IX88_RS09175 PF12833 Helix-turn-helix domain IX88_RS09180 PF01810 IX88_RS09180 IX88_RS09185 PF00155 Aminotransferase class I and II IX88_RS09190 PF01909 Nucleotidyltransferase domain IX88_RS09190 PF01966 HD domain IX88_RS09190 PF08335 GlnD PII-uridylyltransferase IX88_RS09195 PF02222 ATP-grasp domain IX88_RS09200 PF14552 Tautomerase enzyme IX88_RS09205 PF05437 IX88_RS09205 IX88_RS09210 PF03591 IX88_RS09210 IX88_RS09225 PF00027 Cyclic nucleotide-binding domain IX88_RS09225 PF13545 Crp-like helix-turn-helix domain IX88_RS09230 PF06127 IX88_RS09230 IX88_RS09235 PF01926 50S ribosome-binding GTPase IX88_RS09235 PF06071 Protein of unknown function (DUF933) IX88_RS09240 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS09245 PF00005 ABC transporter IX88_RS09245 PF09383 NIL domain IX88_RS09250 PF03180 NLPA lipoprotein IX88_RS09255 PF03180 NLPA lipoprotein IX88_RS09260 PF00296 Luciferase-like monooxygenase IX88_RS09265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS09265 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS09270 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS09270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS09270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS09275 PF13417 Glutathione S-transferase, N-terminal domain IX88_RS09275 PF14497 Glutathione S-transferase, C-terminal domain IX88_RS09280 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX88_RS09285 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS09290 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS09295 PF00005 ABC transporter IX88_RS09305 PF01037 AsnC family IX88_RS09305 PF13412 Winged helix-turn-helix DNA-binding IX88_RS09310 PF01709 Transcriptional regulator IX88_RS09315 PF01553 Acyltransferase IX88_RS09320 PF00440 Bacterial regulatory proteins, tetR family IX88_RS09330 PF01609 Transposase DDE domain IX88_RS09335 PF01609 Transposase DDE domain IX88_RS09350 PF00589 Phage integrase family IX88_RS09350 PF13356 Domain of unknown function (DUF4102) IX88_RS09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS09355 PF03466 LysR substrate binding domain IX88_RS09360 PF05232 IX88_RS09360 IX88_RS09365 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IX88_RS09375 PF00892 EamA-like transporter family IX88_RS09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS09380 PF03466 LysR substrate binding domain IX88_RS09390 PF00419 Fimbrial protein IX88_RS09395 PF00577 Outer membrane usher protein IX88_RS09395 PF13953 PapC C-terminal domain IX88_RS09395 PF13954 PapC N-terminal domain IX88_RS09400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IX88_RS09400 PF02753 Pili assembly chaperone PapD, C-terminal domain IX88_RS09405 PF16970 IX88_RS09405 IX88_RS09420 PF04055 Radical SAM superfamily IX88_RS09420 PF06968 Biotin and Thiamin Synthesis associated domain IX88_RS09425 PF08331 IX88_RS09425 IX88_RS09425 PF13484 IX88_RS09425 IX88_RS09430 PF01256 Carbohydrate kinase IX88_RS09430 PF03853 YjeF-related protein N-terminus IX88_RS09435 PF02075 Crossover junction endodeoxyribonuclease RuvC IX88_RS09440 PF01381 Helix-turn-helix IX88_RS09445 PF13420 Acetyltransferase (GNAT) domain IX88_RS09450 PF00905 Penicillin binding protein transpeptidase domain IX88_RS09455 PF04186 IX88_RS09455 IX88_RS09470 PF00438 S-adenosylmethionine synthetase, N-terminal domain IX88_RS09470 PF02772 S-adenosylmethionine synthetase, central domain IX88_RS09470 PF02773 S-adenosylmethionine synthetase, C-terminal domain IX88_RS09475 PF00456 Transketolase, thiamine diphosphate binding domain IX88_RS09475 PF02779 Transketolase, pyrimidine binding domain IX88_RS09475 PF02780 Transketolase, C-terminal domain IX88_RS09480 PF02566 OsmC-like protein IX88_RS09485 PF04264 YceI-like domain IX88_RS09490 PF04970 Lecithin retinol acyltransferase IX88_RS09495 PF09992 Predicted periplasmic protein (DUF2233) IX88_RS09505 PF05958 tRNA (Uracil-5-)-methyltransferase IX88_RS09510 PF04229 GrpB protein IX88_RS09515 PF00171 Aldehyde dehydrogenase family IX88_RS09515 PF01619 Proline dehydrogenase IX88_RS09515 PF14850 DNA-binding domain of Proline dehydrogenase IX88_RS09520 PF01037 AsnC family IX88_RS09520 PF13404 AsnC-type helix-turn-helix domain IX88_RS09525 PF00474 Sodium:solute symporter family IX88_RS09530 PF02146 Sir2 family IX88_RS09535 PF01597 Glycine cleavage H-protein IX88_RS09540 PF12625 IX88_RS09540 IX88_RS09540 PF12833 Helix-turn-helix domain IX88_RS09545 PF01575 MaoC like domain IX88_RS09550 PF00005 ABC transporter IX88_RS09550 PF00664 ABC transporter transmembrane region IX88_RS09555 PF09831 IX88_RS09555 IX88_RS09560 PF06912 IX88_RS09560 IX88_RS09565 PF00375 Sodium:dicarboxylate symporter family IX88_RS09570 PF01022 Bacterial regulatory protein, arsR family IX88_RS09575 PF00440 Bacterial regulatory proteins, tetR family IX88_RS09580 PF08007 Cupin superfamily protein IX88_RS09585 PF02545 Maf-like protein IX88_RS09590 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) IX88_RS09595 PF00162 Phosphoglycerate kinase IX88_RS09605 PF01116 Fructose-bisphosphate aldolase class-II IX88_RS09610 PF00639 PPIC-type PPIASE domain IX88_RS09610 PF09312 SurA N-terminal domain IX88_RS09610 PF13616 PPIC-type PPIASE domain IX88_RS09615 PF03968 OstA-like protein IX88_RS09615 PF04453 Organic solvent tolerance protein IX88_RS09620 PF01636 Phosphotransferase enzyme family IX88_RS09625 PF00483 Nucleotidyl transferase IX88_RS09630 PF02527 rRNA small subunit methyltransferase G IX88_RS09635 PF13614 AAA domain IX88_RS09640 PF02195 ParB-like nuclease domain IX88_RS09645 PF01618 IX88_RS09645 IX88_RS09650 PF02472 Biopolymer transport protein ExbD/TolR IX88_RS09655 PF00005 ABC transporter IX88_RS09655 PF00664 ABC transporter transmembrane region IX88_RS09660 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IX88_RS09665 PF02348 Cytidylyltransferase IX88_RS09670 PF13177 DNA polymerase III, delta subunit IX88_RS09675 PF07238 PilZ domain IX88_RS09680 PF01026 TatD related DNase IX88_RS09685 PF00440 Bacterial regulatory proteins, tetR family IX88_RS09690 PF13633 Prokaryotic N-terminal methylation site IX88_RS09695 PF02501 Type II secretion system (T2SS), protein I IX88_RS09695 PF13633 Prokaryotic N-terminal methylation site IX88_RS09700 PF11612 Type II secretion system (T2SS), protein J IX88_RS09700 PF13633 Prokaryotic N-terminal methylation site IX88_RS09705 PF03934 Type II secretion system (T2SS), protein K IX88_RS09710 PF01242 6-pyruvoyl tetrahydropterin synthase IX88_RS09715 PF03167 Uracil DNA glycosylase superfamily IX88_RS09720 PF16113 IX88_RS09720 IX88_RS09725 PF14437 IX88_RS09725 IX88_RS09730 PF10604 Polyketide cyclase / dehydrase and lipid transport IX88_RS09735 PF02224 Cytidylate kinase IX88_RS09740 PF00575 S1 RNA binding domain IX88_RS09745 PF00216 Bacterial DNA-binding protein IX88_RS09750 PF06305 IX88_RS09750 IX88_RS09755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IX88_RS09760 PF03956 IX88_RS09760 IX88_RS09765 PF00743 Flavin-binding monooxygenase-like IX88_RS09770 PF12625 IX88_RS09770 IX88_RS09770 PF12833 Helix-turn-helix domain IX88_RS09775 PF03969 AFG1-like ATPase IX88_RS09780 PF01274 Malate synthase IX88_RS09785 PF02472 Biopolymer transport protein ExbD/TolR IX88_RS09790 PF02472 Biopolymer transport protein ExbD/TolR IX88_RS09795 PF01618 IX88_RS09795 IX88_RS09800 PF03544 Gram-negative bacterial TonB protein C-terminal IX88_RS09805 PF00593 TonB dependent receptor IX88_RS09805 PF07715 TonB-dependent Receptor Plug Domain IX88_RS09810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX88_RS09815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX88_RS09820 PF01432 Peptidase family M3 IX88_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS09830 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS09830 PF12911 IX88_RS09830 IX88_RS09835 PF00005 ABC transporter IX88_RS09835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX88_RS09840 PF02586 Uncharacterised ACR, COG2135 IX88_RS09850 PF00459 Inositol monophosphatase family IX88_RS09855 PF00300 Histidine phosphatase superfamily (branch 1) IX88_RS09860 PF01649 Ribosomal protein S20 IX88_RS09865 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX88_RS09870 PF03737 Demethylmenaquinone methyltransferase IX88_RS09875 PF13417 Glutathione S-transferase, N-terminal domain IX88_RS09880 PF04261 Dyp-type peroxidase family IX88_RS09890 PF00270 DEAD/DEAH box helicase IX88_RS09890 PF00271 Helicase conserved C-terminal domain IX88_RS09890 PF02559 CarD-like/TRCF domain IX88_RS09890 PF03461 TRCF domain IX88_RS09895 PF01230 HIT domain IX88_RS09900 PF00211 Adenylate and Guanylate cyclase catalytic domain IX88_RS09905 PF00111 2Fe-2S iron-sulfur cluster binding domain IX88_RS09910 PF00012 Hsp70 protein IX88_RS09915 PF00226 DnaJ domain IX88_RS09915 PF07743 HSCB C-terminal oligomerisation domain IX88_RS09920 PF01521 Iron-sulphur cluster biosynthesis IX88_RS09925 PF01592 NifU-like N terminal domain IX88_RS09930 PF00266 Aminotransferase class-V IX88_RS09935 PF02082 Transcriptional regulator IX88_RS09945 PF05597 IX88_RS09945 IX88_RS09950 PF00216 Bacterial DNA-binding protein IX88_RS09955 PF13616 PPIC-type PPIASE domain IX88_RS09955 PF13624 SurA N-terminal domain IX88_RS09960 PF12833 Helix-turn-helix domain IX88_RS09960 PF12852 Cupin IX88_RS09965 PF00487 IX88_RS09965 IX88_RS09970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS09970 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS09975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS09975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS09980 PF03109 IX88_RS09980 IX88_RS09990 PF04073 Aminoacyl-tRNA editing domain IX88_RS10000 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IX88_RS10005 PF07690 Major Facilitator Superfamily IX88_RS10010 PF04183 IucA / IucC family IX88_RS10010 PF06276 Ferric iron reductase FhuF-like transporter IX88_RS10015 PF04183 IucA / IucC family IX88_RS10015 PF06276 Ferric iron reductase FhuF-like transporter IX88_RS10020 PF11575 IX88_RS10020 IX88_RS10025 PF03737 Demethylmenaquinone methyltransferase IX88_RS10030 PF00593 TonB dependent receptor IX88_RS10030 PF07715 TonB-dependent Receptor Plug Domain IX88_RS10040 PF03929 IX88_RS10040 IX88_RS10050 PF13523 Acetyltransferase (GNAT) domain IX88_RS10055 PF08125 Mannitol dehydrogenase C-terminal domain IX88_RS10055 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS10060 PF13563 2'-5' RNA ligase superfamily IX88_RS10065 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IX88_RS10070 PF02277 Phosphoribosyltransferase IX88_RS10075 PF00300 Histidine phosphatase superfamily (branch 1) IX88_RS10080 PF00328 Histidine phosphatase superfamily (branch 2) IX88_RS10085 PF02654 IX88_RS10085 IX88_RS10090 PF00793 DAHP synthetase I family IX88_RS10095 PF01925 IX88_RS10095 IX88_RS10105 PF03929 IX88_RS10105 IX88_RS10115 PF00593 TonB dependent receptor IX88_RS10115 PF07715 TonB-dependent Receptor Plug Domain IX88_RS10120 PF02684 IX88_RS10120 IX88_RS10125 PF00440 Bacterial regulatory proteins, tetR family IX88_RS10125 PF09209 Domain of unknown function (DUF1956) IX88_RS10130 PF13437 HlyD family secretion protein IX88_RS10130 PF13533 Biotin-lipoyl like IX88_RS10135 PF00005 ABC transporter IX88_RS10140 PF12698 ABC-2 family transporter protein IX88_RS10145 PF12698 ABC-2 family transporter protein IX88_RS10150 PF10977 IX88_RS10150 IX88_RS10160 PF06078 Bacterial protein of unknown function (DUF937) IX88_RS10165 PF13609 Gram-negative porin IX88_RS10170 PF01230 HIT domain IX88_RS10175 PF13308 YARHG domain IX88_RS10180 PF04828 Glutathione-dependent formaldehyde-activating enzyme IX88_RS10195 PF13103 TonB C terminal IX88_RS10200 PF08241 Methyltransferase domain IX88_RS10205 PF00561 alpha/beta hydrolase fold IX88_RS10210 PF01053 Cys/Met metabolism PLP-dependent enzyme IX88_RS10220 PF02575 YbaB/EbfC DNA-binding family IX88_RS10225 PF02132 RecR protein IX88_RS10225 PF13662 Toprim domain IX88_RS10230 PF00570 HRDC domain IX88_RS10230 PF01612 3'-5' exonuclease IX88_RS10250 PF05166 YcgL domain IX88_RS10260 PF00004 ATPase family associated with various cellular activities (AAA) IX88_RS10265 PF05762 VWA domain containing CoxE-like protein IX88_RS10270 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS10275 PF05175 Methyltransferase small domain IX88_RS10280 PF01264 Chorismate synthase IX88_RS10285 PF00990 GGDEF domain IX88_RS10290 PF14518 Iron-containing redox enzyme IX88_RS10300 PF04055 Radical SAM superfamily IX88_RS10305 PF00676 Dehydrogenase E1 component IX88_RS10310 PF02779 Transketolase, pyrimidine binding domain IX88_RS10310 PF02780 Transketolase, C-terminal domain IX88_RS10315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX88_RS10315 PF00364 Biotin-requiring enzyme IX88_RS10315 PF02817 e3 binding domain IX88_RS10320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX88_RS10320 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS10325 PF00106 short chain dehydrogenase IX88_RS10330 PF00107 Zinc-binding dehydrogenase IX88_RS10330 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS10335 PF01062 IX88_RS10335 IX88_RS10340 PF00158 Sigma-54 interaction domain IX88_RS10340 PF02954 Bacterial regulatory protein, Fis family IX88_RS10345 PF00753 Metallo-beta-lactamase superfamily IX88_RS10350 PF04273 Putative phosphatase (DUF442) IX88_RS10350 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS10355 PF01925 IX88_RS10355 IX88_RS10360 PF00742 Homoserine dehydrogenase IX88_RS10360 PF03447 Homoserine dehydrogenase, NAD binding domain IX88_RS10365 PF00892 EamA-like transporter family IX88_RS10370 PF12833 Helix-turn-helix domain IX88_RS10375 PF01638 HxlR-like helix-turn-helix IX88_RS10380 PF02525 Flavodoxin-like fold IX88_RS10385 PF02417 IX88_RS10385 IX88_RS10390 PF00392 Bacterial regulatory proteins, gntR family IX88_RS10390 PF07702 UTRA domain IX88_RS10395 PF00890 FAD binding domain IX88_RS10395 PF02910 Fumarate reductase flavoprotein C-term IX88_RS10400 PF13187 4Fe-4S dicluster domain IX88_RS10405 PF13379 NMT1-like family IX88_RS10415 PF00083 Sugar (and other) transporter IX88_RS10420 PF00593 TonB dependent receptor IX88_RS10420 PF07715 TonB-dependent Receptor Plug Domain IX88_RS10425 PF00206 Lyase IX88_RS10425 PF10415 Fumarase C C-terminus IX88_RS10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS10440 PF03466 LysR substrate binding domain IX88_RS10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS10445 PF03466 LysR substrate binding domain IX88_RS10450 PF00108 Thiolase, N-terminal domain IX88_RS10450 PF02803 Thiolase, C-terminal domain IX88_RS10455 PF02667 IX88_RS10455 IX88_RS10460 PF01144 Coenzyme A transferase IX88_RS10465 PF01144 Coenzyme A transferase IX88_RS10470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS10470 PF03466 LysR substrate binding domain IX88_RS10480 PF11738 Protein of unknown function (DUF3298) IX88_RS10485 PF07681 IX88_RS10485 IX88_RS10490 PF00440 Bacterial regulatory proteins, tetR family IX88_RS10500 PF02447 IX88_RS10500 IX88_RS10505 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS10510 PF12833 Helix-turn-helix domain IX88_RS10510 PF14525 IX88_RS10510 IX88_RS10515 PF07690 Major Facilitator Superfamily IX88_RS10520 PF01738 Dienelactone hydrolase family IX88_RS10525 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS10535 PF01613 Flavin reductase like domain IX88_RS10540 PF13557 IX88_RS10540 IX88_RS10545 PF12833 Helix-turn-helix domain IX88_RS10545 PF14525 IX88_RS10545 IX88_RS10550 PF00111 2Fe-2S iron-sulfur cluster binding domain IX88_RS10550 PF00175 Oxidoreductase NAD-binding domain IX88_RS10550 PF00970 Oxidoreductase FAD-binding domain IX88_RS10555 PF00866 Ring hydroxylating beta subunit IX88_RS10560 PF00355 Rieske [2Fe-2S] domain IX88_RS10560 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IX88_RS10565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS10570 PF13531 Bacterial extracellular solute-binding protein IX88_RS10575 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS10580 PF00005 ABC transporter IX88_RS10585 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS10590 PF00857 Isochorismatase family IX88_RS10595 PF01475 Ferric uptake regulator family IX88_RS10600 PF00149 Calcineurin-like phosphoesterase IX88_RS10600 PF02872 5'-nucleotidase, C-terminal domain IX88_RS10605 PF02503 Polyphosphate kinase middle domain IX88_RS10605 PF13089 Polyphosphate kinase N-terminal domain IX88_RS10605 PF13090 Polyphosphate kinase C-terminal domain IX88_RS10610 PF12706 Beta-lactamase superfamily domain IX88_RS10615 PF03070 TENA/THI-4/PQQC family IX88_RS10620 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IX88_RS10625 PF04055 Radical SAM superfamily IX88_RS10625 PF13186 Iron-sulfur cluster-binding domain IX88_RS10625 PF13353 4Fe-4S single cluster domain IX88_RS10630 PF01244 Membrane dipeptidase (Peptidase family M19) IX88_RS10650 PF13091 PLD-like domain IX88_RS10665 PF00199 Catalase IX88_RS10675 PF00107 Zinc-binding dehydrogenase IX88_RS10675 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS10680 PF16223 IX88_RS10680 IX88_RS10685 PF00419 Fimbrial protein IX88_RS10690 PF00577 Outer membrane usher protein IX88_RS10690 PF13953 PapC C-terminal domain IX88_RS10690 PF13954 PapC N-terminal domain IX88_RS10695 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IX88_RS10695 PF02753 Pili assembly chaperone PapD, C-terminal domain IX88_RS10700 PF16970 IX88_RS10700 IX88_RS10715 PF05144 IX88_RS10715 IX88_RS10715 PF05155 IX88_RS10715 IX88_RS10740 PF10734 IX88_RS10740 IX88_RS10745 PF05707 Zonular occludens toxin (Zot) IX88_RS10755 PF05144 IX88_RS10755 IX88_RS10755 PF05155 IX88_RS10755 IX88_RS10765 PF00005 ABC transporter IX88_RS10770 PF00873 AcrB/AcrD/AcrF family IX88_RS10775 PF16576 IX88_RS10775 IX88_RS10780 PF00072 Response regulator receiver domain IX88_RS10780 PF00486 Transcriptional regulatory protein, C terminal IX88_RS10785 PF00672 HAMP domain IX88_RS10790 PF01609 Transposase DDE domain IX88_RS10795 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS10805 PF12625 IX88_RS10805 IX88_RS10805 PF12833 Helix-turn-helix domain IX88_RS10810 PF12146 Putative lysophospholipase IX88_RS10815 PF00106 short chain dehydrogenase IX88_RS10820 PF00106 short chain dehydrogenase IX88_RS10825 PF01844 HNH endonuclease IX88_RS10830 PF13673 Acetyltransferase (GNAT) domain IX88_RS10845 PF00440 Bacterial regulatory proteins, tetR family IX88_RS10850 PF01381 Helix-turn-helix IX88_RS10855 PF07804 HipA-like C-terminal domain IX88_RS10855 PF07805 HipA-like N-terminal domain IX88_RS10860 PF13328 HD domain IX88_RS10870 PF01975 Survival protein SurE IX88_RS10880 PF02321 Outer membrane efflux protein IX88_RS10885 PF03321 GH3 auxin-responsive promoter IX88_RS10895 PF07690 Major Facilitator Superfamily IX88_RS10900 PF13437 HlyD family secretion protein IX88_RS10900 PF13533 Biotin-lipoyl like IX88_RS10905 PF02219 Methylenetetrahydrofolate reductase IX88_RS10905 PF12225 IX88_RS10905 IX88_RS10910 PF00293 NUDIX domain IX88_RS10915 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IX88_RS10920 PF00156 Phosphoribosyl transferase domain IX88_RS10925 PF01925 IX88_RS10925 IX88_RS10930 PF02311 AraC-like ligand binding domain IX88_RS10930 PF12833 Helix-turn-helix domain IX88_RS10935 PF00583 Acetyltransferase (GNAT) family IX88_RS10940 PF00005 ABC transporter IX88_RS10945 PF01032 FecCD transport family IX88_RS10950 PF01497 Periplasmic binding protein IX88_RS10955 PF00107 Zinc-binding dehydrogenase IX88_RS10955 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS10960 PF02627 Carboxymuconolactone decarboxylase family IX88_RS10965 PF07883 Cupin domain IX88_RS10970 PF06719 IX88_RS10970 IX88_RS10970 PF12833 Helix-turn-helix domain IX88_RS10975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX88_RS10975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX88_RS10980 PF07690 Major Facilitator Superfamily IX88_RS10985 PF01370 NAD dependent epimerase/dehydratase family IX88_RS10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS10990 PF03466 LysR substrate binding domain IX88_RS10995 PF01557 Fumarylacetoacetate (FAA) hydrolase family IX88_RS11000 PF00920 Dehydratase family IX88_RS11005 PF00171 Aldehyde dehydrogenase family IX88_RS11010 PF00440 Bacterial regulatory proteins, tetR family IX88_RS11010 PF14246 AefR-like transcriptional repressor, C-terminal region IX88_RS11015 PF07690 Major Facilitator Superfamily IX88_RS11020 PF16576 IX88_RS11020 IX88_RS11025 PF00353 Hemolysin-type calcium-binding repeat (2 copies) IX88_RS11035 PF04657 IX88_RS11035 IX88_RS11040 PF04657 IX88_RS11040 IX88_RS11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS11045 PF03466 LysR substrate binding domain IX88_RS11050 PF07690 Major Facilitator Superfamily IX88_RS11055 PF08450 SMP-30/Gluconolaconase/LRE-like region IX88_RS11060 PF00392 Bacterial regulatory proteins, gntR family IX88_RS11060 PF07702 UTRA domain IX88_RS11065 PF07158 IX88_RS11065 IX88_RS11070 PF04909 Amidohydrolase IX88_RS11075 PF07690 Major Facilitator Superfamily IX88_RS11090 PF04829 IX88_RS11090 IX88_RS11090 PF04830 IX88_RS11090 IX88_RS11090 PF05860 haemagglutination activity domain IX88_RS11090 PF13018 IX88_RS11090 IX88_RS11095 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IX88_RS11095 PF08479 POTRA domain, ShlB-type IX88_RS11100 PF00440 Bacterial regulatory proteins, tetR family IX88_RS11105 PF01546 Peptidase family M20/M25/M40 IX88_RS11105 PF07687 Peptidase dimerisation domain IX88_RS11115 PF00999 Sodium/hydrogen exchanger family IX88_RS11115 PF02254 TrkA-N domain IX88_RS11120 PF07995 Glucose / Sorbosone dehydrogenase IX88_RS11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS11125 PF03466 LysR substrate binding domain IX88_RS11130 PF00857 Isochorismatase family IX88_RS11135 PF03992 Antibiotic biosynthesis monooxygenase IX88_RS11140 PF00440 Bacterial regulatory proteins, tetR family IX88_RS11145 PF12706 Beta-lactamase superfamily domain IX88_RS11150 PF02082 Transcriptional regulator IX88_RS11155 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS11160 PF01965 DJ-1/PfpI family IX88_RS11165 PF13411 MerR HTH family regulatory protein IX88_RS11170 PF01965 DJ-1/PfpI family IX88_RS11175 PF03435 Saccharopine dehydrogenase IX88_RS11180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX88_RS11185 PF00561 alpha/beta hydrolase fold IX88_RS11195 PF00171 Aldehyde dehydrogenase family IX88_RS11205 PF07690 Major Facilitator Superfamily IX88_RS11210 PF00920 Dehydratase family IX88_RS11215 PF00392 Bacterial regulatory proteins, gntR family IX88_RS11215 PF07729 FCD domain IX88_RS11220 PF09694 IX88_RS11220 IX88_RS11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS11225 PF03466 LysR substrate binding domain IX88_RS11230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IX88_RS11230 PF13378 Enolase C-terminal domain-like IX88_RS11235 PF02426 Muconolactone delta-isomerase IX88_RS11240 PF00775 Dioxygenase IX88_RS11240 PF04444 Catechol dioxygenase N terminus IX88_RS11245 PF01144 Coenzyme A transferase IX88_RS11250 PF01144 Coenzyme A transferase IX88_RS11255 PF00108 Thiolase, N-terminal domain IX88_RS11255 PF02803 Thiolase, C-terminal domain IX88_RS11260 PF00561 alpha/beta hydrolase fold IX88_RS11265 PF01804 Penicillin amidase IX88_RS11270 PF00171 Aldehyde dehydrogenase family IX88_RS11280 PF01179 Copper amine oxidase, enzyme domain IX88_RS11280 PF02727 Copper amine oxidase, N2 domain IX88_RS11280 PF02728 Copper amine oxidase, N3 domain IX88_RS11280 PF07833 Copper amine oxidase N-terminal domain IX88_RS11285 PF12833 Helix-turn-helix domain IX88_RS11285 PF14525 IX88_RS11285 IX88_RS11290 PF01613 Flavin reductase like domain IX88_RS11295 PF00111 2Fe-2S iron-sulfur cluster binding domain IX88_RS11295 PF00175 Oxidoreductase NAD-binding domain IX88_RS11295 PF00970 Oxidoreductase FAD-binding domain IX88_RS11300 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS11305 PF00866 Ring hydroxylating beta subunit IX88_RS11310 PF00355 Rieske [2Fe-2S] domain IX88_RS11310 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IX88_RS11315 PF13577 SnoaL-like domain IX88_RS11325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS11325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS11330 PF01425 Amidase IX88_RS11335 PF01047 MarR family IX88_RS11340 PF07690 Major Facilitator Superfamily IX88_RS11345 PF03573 outer membrane porin, OprD family IX88_RS11350 PF00106 short chain dehydrogenase IX88_RS11355 PF00300 Histidine phosphatase superfamily (branch 1) IX88_RS11360 PF01636 Phosphotransferase enzyme family IX88_RS11365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS11365 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS11365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS11370 PF03466 LysR substrate binding domain IX88_RS11375 PF01614 Bacterial transcriptional regulator IX88_RS11375 PF09339 IclR helix-turn-helix domain IX88_RS11380 PF00753 Metallo-beta-lactamase superfamily IX88_RS11385 PF04143 IX88_RS11385 IX88_RS11390 PF04143 IX88_RS11390 IX88_RS11400 PF01011 PQQ enzyme repeat IX88_RS11400 PF13360 PQQ-like domain IX88_RS11405 PF04966 Carbohydrate-selective porin, OprB family IX88_RS11410 PF13229 Right handed beta helix region IX88_RS11415 PF01487 Type I 3-dehydroquinase IX88_RS11420 PF00775 Dioxygenase IX88_RS11425 PF00775 Dioxygenase IX88_RS11425 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IX88_RS11430 PF02627 Carboxymuconolactone decarboxylase family IX88_RS11435 PF07690 Major Facilitator Superfamily IX88_RS11440 PF00561 alpha/beta hydrolase fold IX88_RS11445 PF00206 Lyase IX88_RS11445 PF10397 Adenylosuccinate lyase C-terminus IX88_RS11450 PF00108 Thiolase, N-terminal domain IX88_RS11450 PF02803 Thiolase, C-terminal domain IX88_RS11455 PF01144 Coenzyme A transferase IX88_RS11460 PF01144 Coenzyme A transferase IX88_RS11465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IX88_RS11470 PF04977 Septum formation initiator IX88_RS11475 PF04239 Protein of unknown function (DUF421) IX88_RS11480 PF00113 Enolase, C-terminal TIM barrel domain IX88_RS11480 PF03952 Enolase, N-terminal domain IX88_RS11485 PF00793 DAHP synthetase I family IX88_RS11490 PF00117 Glutamine amidotransferase class-I IX88_RS11490 PF06418 CTP synthase N-terminus IX88_RS11500 PF10118 IX88_RS11500 IX88_RS11505 PF12146 Putative lysophospholipase IX88_RS11510 PF13472 GDSL-like Lipase/Acylhydrolase family IX88_RS11515 PF12680 SnoaL-like domain IX88_RS11520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX88_RS11520 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS11525 PF03551 Transcriptional regulator PadR-like family IX88_RS11525 PF10400 Virulence activator alpha C-term IX88_RS11530 PF12697 Alpha/beta hydrolase family IX88_RS11535 PF00793 DAHP synthetase I family IX88_RS11540 PF02694 IX88_RS11540 IX88_RS11545 PF00004 ATPase family associated with various cellular activities (AAA) IX88_RS11545 PF02861 Clp amino terminal domain IX88_RS11545 PF07724 AAA domain (Cdc48 subfamily) IX88_RS11545 PF10431 C-terminal, D2-small domain, of ClpB protein IX88_RS11550 PF02617 ATP-dependent Clp protease adaptor protein ClpS IX88_RS11560 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX88_RS11560 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX88_RS11570 PF01863 Protein of unknown function DUF45 IX88_RS11575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IX88_RS11580 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS11580 PF00585 C-terminal regulatory domain of Threonine dehydratase IX88_RS11585 PF02254 TrkA-N domain IX88_RS11590 PF02386 Cation transport protein IX88_RS11595 PF02253 Phospholipase A1 IX88_RS11600 PF00675 Insulinase (Peptidase family M16) IX88_RS11600 PF05193 Peptidase M16 inactive domain IX88_RS11600 PF08367 Peptidase M16C associated IX88_RS11605 PF00593 TonB dependent receptor IX88_RS11605 PF07715 TonB-dependent Receptor Plug Domain IX88_RS11610 PF00294 pfkB family carbohydrate kinase IX88_RS11615 PF00355 Rieske [2Fe-2S] domain IX88_RS11620 PF07290 IX88_RS11620 IX88_RS11630 PF01654 IX88_RS11630 IX88_RS11635 PF02322 IX88_RS11635 IX88_RS11640 PF08173 IX88_RS11640 IX88_RS11645 PF09600 IX88_RS11645 IX88_RS11650 PF13673 Acetyltransferase (GNAT) domain IX88_RS11655 PF09829 IX88_RS11655 IX88_RS11660 PF00881 Nitroreductase family IX88_RS11665 PF00448 SRP54-type protein, GTPase domain IX88_RS11665 PF02881 SRP54-type protein, helical bundle domain IX88_RS11685 PF11042 IX88_RS11685 IX88_RS11690 PF00571 CBS domain IX88_RS11695 PF00202 Aminotransferase class-III IX88_RS11700 PF00462 Glutaredoxin IX88_RS11710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS11710 PF03466 LysR substrate binding domain IX88_RS11715 PF00557 Metallopeptidase family M24 IX88_RS11720 PF05525 IX88_RS11720 IX88_RS11725 PF03928 Domain of unknown function (DUF336) IX88_RS11740 PF12146 Putative lysophospholipase IX88_RS11745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX88_RS11745 PF00381 PTS HPr component phosphorylation site IX88_RS11745 PF00391 PEP-utilising enzyme, mobile domain IX88_RS11745 PF02896 PEP-utilising enzyme, TIM barrel domain IX88_RS11745 PF05524 PEP-utilising enzyme, N-terminal IX88_RS11750 PF00294 pfkB family carbohydrate kinase IX88_RS11755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX88_RS11755 PF02378 Phosphotransferase system, EIIC IX88_RS11760 PF01047 MarR family IX88_RS11770 PF00563 EAL domain IX88_RS11770 PF00990 GGDEF domain IX88_RS11770 PF08447 PAS fold IX88_RS11770 PF08448 PAS fold IX88_RS11775 PF00582 Universal stress protein family IX88_RS11780 PF07995 Glucose / Sorbosone dehydrogenase IX88_RS11785 PF02586 Uncharacterised ACR, COG2135 IX88_RS11790 PF00916 IX88_RS11790 IX88_RS11790 PF01740 STAS domain IX88_RS11795 PF00082 Subtilase family IX88_RS11795 PF05922 Peptidase inhibitor I9 IX88_RS11800 PF07859 alpha/beta hydrolase fold IX88_RS11805 PF00324 Amino acid permease IX88_RS11810 PF00266 Aminotransferase class-V IX88_RS11815 PF01037 AsnC family IX88_RS11815 PF13412 Winged helix-turn-helix DNA-binding IX88_RS11820 PF13302 Acetyltransferase (GNAT) domain IX88_RS11835 PF05666 IX88_RS11835 IX88_RS11840 PF13419 Haloacid dehalogenase-like hydrolase IX88_RS11845 PF01479 S4 domain IX88_RS11850 PF00154 recA bacterial DNA recombination protein IX88_RS11855 PF02631 RecX family IX88_RS11865 PF13174 Tetratricopeptide repeat IX88_RS11865 PF16331 IX88_RS11865 IX88_RS11870 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS11870 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IX88_RS11875 PF07977 FabA-like domain IX88_RS11880 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS11880 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IX88_RS11880 PF14602 Hexapeptide repeat of succinyl-transferase IX88_RS11885 PF03938 Outer membrane protein (OmpH-like) IX88_RS11890 PF01103 Surface antigen IX88_RS11890 PF07244 Surface antigen variable number repeat IX88_RS11895 PF00595 PDZ domain (Also known as DHR or GLGF) IX88_RS11895 PF02163 Peptidase family M50 IX88_RS11895 PF13180 PDZ domain IX88_RS11900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IX88_RS11900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal IX88_RS11900 PF13288 DXP reductoisomerase C-terminal domain IX88_RS11905 PF01148 Cytidylyltransferase family IX88_RS11910 PF01255 Putative undecaprenyl diphosphate synthase IX88_RS11915 PF01765 Ribosome recycling factor IX88_RS11920 PF00696 Amino acid kinase family IX88_RS11925 PF00919 Uncharacterized protein family UPF0004 IX88_RS11925 PF04055 Radical SAM superfamily IX88_RS11930 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS11930 PF00989 PAS fold IX88_RS11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS11935 PF00072 Response regulator receiver domain IX88_RS11935 PF00158 Sigma-54 interaction domain IX88_RS11935 PF02954 Bacterial regulatory protein, Fis family IX88_RS11945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX88_RS11945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX88_RS11955 PF02542 YgbB family IX88_RS11965 PF01266 FAD dependent oxidoreductase IX88_RS11985 PF00206 Lyase IX88_RS11985 PF10415 Fumarase C C-terminus IX88_RS11990 PF01370 NAD dependent epimerase/dehydratase family IX88_RS11995 PF02635 DsrE/DsrF-like family IX88_RS12010 PF04358 DsrC like protein IX88_RS12015 PF00892 EamA-like transporter family IX88_RS12020 PF00155 Aminotransferase class I and II IX88_RS12020 PF00392 Bacterial regulatory proteins, gntR family IX88_RS12025 PF01638 HxlR-like helix-turn-helix IX88_RS12030 PF00994 Probable molybdopterin binding domain IX88_RS12030 PF03453 MoeA N-terminal region (domain I and II) IX88_RS12030 PF03454 MoeA C-terminal region (domain IV) IX88_RS12035 PF00994 Probable molybdopterin binding domain IX88_RS12035 PF01967 MoaC family IX88_RS12040 PF02391 MoaE protein IX88_RS12045 PF02597 ThiS family IX88_RS12050 PF04055 Radical SAM superfamily IX88_RS12050 PF06463 Molybdenum Cofactor Synthesis C IX88_RS12050 PF13353 4Fe-4S single cluster domain IX88_RS12055 PF00384 Molybdopterin oxidoreductase IX88_RS12055 PF01568 Molydopterin dinucleotide binding domain IX88_RS12055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX88_RS12060 PF12804 MobA-like NTP transferase domain IX88_RS12065 PF00384 Molybdopterin oxidoreductase IX88_RS12065 PF01568 Molydopterin dinucleotide binding domain IX88_RS12065 PF04324 BFD-like [2Fe-2S] binding domain IX88_RS12065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX88_RS12070 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS12070 PF13806 Rieske-like [2Fe-2S] domain IX88_RS12075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX88_RS12075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX88_RS12075 PF04324 BFD-like [2Fe-2S] binding domain IX88_RS12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS12085 PF00072 Response regulator receiver domain IX88_RS12085 PF03861 ANTAR domain IX88_RS12090 PF13379 NMT1-like family IX88_RS12095 PF00817 impB/mucB/samB family IX88_RS12095 PF13438 IX88_RS12095 IX88_RS12100 PF01220 Dehydroquinase class II IX88_RS12105 PF00364 Biotin-requiring enzyme IX88_RS12110 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain IX88_RS12110 PF02785 Biotin carboxylase C-terminal domain IX88_RS12110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX88_RS12120 PF12832 MFS_1 like family IX88_RS12140 PF02586 Uncharacterised ACR, COG2135 IX88_RS12145 PF00717 Peptidase S24-like IX88_RS12150 PF00817 impB/mucB/samB family IX88_RS12150 PF11799 impB/mucB/samB family C-terminal domain IX88_RS12150 PF13438 IX88_RS12150 IX88_RS12155 PF01609 Transposase DDE domain IX88_RS12160 PF01609 Transposase DDE domain IX88_RS12170 PF05838 Glycosyl hydrolase 108 IX88_RS12170 PF09374 Predicted Peptidoglycan domain IX88_RS12180 PF14301 IX88_RS12180 IX88_RS12185 PF13550 IX88_RS12185 IX88_RS12190 PF06805 IX88_RS12190 IX88_RS12195 PF00877 NlpC/P60 family IX88_RS12195 PF14464 Prokaryotic homologs of the JAB domain IX88_RS12200 PF05100 IX88_RS12200 IX88_RS12210 PF05939 IX88_RS12210 IX88_RS12220 PF16518 IX88_RS12220 IX88_RS12225 PF01464 Transglycosylase SLT domain IX88_RS12240 PF14020 IX88_RS12240 IX88_RS12270 PF13554 Bacteriophage related domain of unknown function IX88_RS12295 PF12949 HeH/LEM domain IX88_RS12310 PF13876 IX88_RS12310 IX88_RS12320 PF04233 IX88_RS12320 IX88_RS12325 PF13264 IX88_RS12325 IX88_RS12330 PF03237 Terminase-like family IX88_RS12335 PF10045 IX88_RS12335 IX88_RS12365 PF01609 Transposase DDE domain IX88_RS12370 PF01609 Transposase DDE domain IX88_RS12395 PF04480 Protein of unknown function (DUF559) IX88_RS12405 PF01844 HNH endonuclease IX88_RS12420 PF01695 IstB-like ATP binding protein IX88_RS12450 PF01381 Helix-turn-helix IX88_RS12455 PF00717 Peptidase S24-like IX88_RS12455 PF01381 Helix-turn-helix IX88_RS12480 PF13479 IX88_RS12480 IX88_RS12515 PF00589 Phage integrase family IX88_RS12520 PF14518 Iron-containing redox enzyme IX88_RS12525 PF00440 Bacterial regulatory proteins, tetR family IX88_RS12530 PF03929 IX88_RS12530 IX88_RS12535 PF01645 Conserved region in glutamate synthase IX88_RS12540 PF12146 Putative lysophospholipase IX88_RS12545 PF02698 DUF218 domain IX88_RS12550 PF01565 FAD binding domain IX88_RS12550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IX88_RS12555 PF01451 Low molecular weight phosphotyrosine protein phosphatase IX88_RS12560 PF10282 Lactonase, 7-bladed beta-propeller IX88_RS12565 PF00465 Iron-containing alcohol dehydrogenase IX88_RS12570 PF13279 Thioesterase-like superfamily IX88_RS12575 PF04185 Phosphoesterase family IX88_RS12575 PF05506 IX88_RS12575 IX88_RS12580 PF12169 DNA polymerase III subunits gamma and tau domain III IX88_RS12580 PF13177 DNA polymerase III, delta subunit IX88_RS12590 PF13582 Metallo-peptidase family M12B Reprolysin-like IX88_RS12595 PF07690 Major Facilitator Superfamily IX88_RS12600 PF00440 Bacterial regulatory proteins, tetR family IX88_RS12605 PF00144 Beta-lactamase IX88_RS12610 PF01575 MaoC like domain IX88_RS12615 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS12620 PF00108 Thiolase, N-terminal domain IX88_RS12620 PF02803 Thiolase, C-terminal domain IX88_RS12625 PF05232 IX88_RS12625 IX88_RS12630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS12630 PF03466 LysR substrate binding domain IX88_RS12635 PF00923 Transaldolase IX88_RS12640 PF01810 IX88_RS12640 IX88_RS12645 PF01037 AsnC family IX88_RS12645 PF13412 Winged helix-turn-helix DNA-binding IX88_RS12650 PF03594 IX88_RS12650 IX88_RS12655 PF02308 IX88_RS12655 IX88_RS12660 PF00122 E1-E2 ATPase IX88_RS12660 PF00690 Cation transporter/ATPase, N-terminus IX88_RS12660 PF00702 haloacid dehalogenase-like hydrolase IX88_RS12665 PF06271 IX88_RS12665 IX88_RS12680 PF00582 Universal stress protein family IX88_RS12685 PF00005 ABC transporter IX88_RS12700 PF03922 OmpW family IX88_RS12705 PF00593 TonB dependent receptor IX88_RS12705 PF07715 TonB-dependent Receptor Plug Domain IX88_RS12710 PF13527 Acetyltransferase (GNAT) domain IX88_RS12735 PF00924 Mechanosensitive ion channel IX88_RS12740 PF00593 TonB dependent receptor IX88_RS12740 PF07715 TonB-dependent Receptor Plug Domain IX88_RS12745 PF00440 Bacterial regulatory proteins, tetR family IX88_RS12750 PF13518 Helix-turn-helix domain IX88_RS12755 PF00665 Integrase core domain IX88_RS12755 PF13276 IX88_RS12755 IX88_RS12765 PF01037 AsnC family IX88_RS12765 PF13412 Winged helix-turn-helix DNA-binding IX88_RS12770 PF01817 Chorismate mutase type II IX88_RS12775 PF00106 short chain dehydrogenase IX88_RS12780 PF00106 short chain dehydrogenase IX88_RS12785 PF13417 Glutathione S-transferase, N-terminal domain IX88_RS12785 PF14497 Glutathione S-transferase, C-terminal domain IX88_RS12790 PF05229 IX88_RS12790 IX88_RS12800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IX88_RS12805 PF05229 IX88_RS12805 IX88_RS12810 PF01433 Peptidase family M1 IX88_RS12810 PF11940 Domain of unknown function (DUF3458) IX88_RS12825 PF02110 Hydroxyethylthiazole kinase family IX88_RS12830 PF06445 GyrI-like small molecule binding domain IX88_RS12830 PF12833 Helix-turn-helix domain IX88_RS12835 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase IX88_RS12840 PF05970 IX88_RS12840 IX88_RS12840 PF14493 IX88_RS12840 IX88_RS12845 PF00465 Iron-containing alcohol dehydrogenase IX88_RS12850 PF12146 Putative lysophospholipase IX88_RS12860 PF00171 Aldehyde dehydrogenase family IX88_RS12865 PF13520 Amino acid permease IX88_RS12870 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IX88_RS12875 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IX88_RS12880 PF00117 Glutamine amidotransferase class-I IX88_RS12885 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX88_RS12885 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IX88_RS12890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IX88_RS12895 PF00149 Calcineurin-like phosphoesterase IX88_RS12905 PF00881 Nitroreductase family IX88_RS12910 PF00892 EamA-like transporter family IX88_RS12920 PF01715 IPP transferase IX88_RS12925 PF01119 DNA mismatch repair protein, C-terminal domain IX88_RS12925 PF08676 MutL C terminal dimerisation domain IX88_RS12925 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS12930 PF02367 Uncharacterised P-loop hydrolase UPF0079 IX88_RS12935 PF00849 RNA pseudouridylate synthase IX88_RS12940 PF04221 RelB antitoxin IX88_RS12945 PF00583 Acetyltransferase (GNAT) family IX88_RS12950 PF00849 RNA pseudouridylate synthase IX88_RS12950 PF01479 S4 domain IX88_RS12960 PF04284 IX88_RS12960 IX88_RS12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS12965 PF03466 LysR substrate binding domain IX88_RS12970 PF10670 IX88_RS12970 IX88_RS12980 PF07690 Major Facilitator Superfamily IX88_RS12985 PF00520 Ion transport protein IX88_RS12995 PF00330 Aconitase family (aconitate hydratase) IX88_RS12995 PF06434 Aconitate hydratase 2 N-terminus IX88_RS12995 PF11791 Aconitate B N-terminal domain IX88_RS13005 PF04357 IX88_RS13005 IX88_RS13010 PF01103 Surface antigen IX88_RS13010 PF07244 Surface antigen variable number repeat IX88_RS13015 PF07690 Major Facilitator Superfamily IX88_RS13020 PF03232 IX88_RS13020 IX88_RS13025 PF10973 IX88_RS13025 IX88_RS13030 PF00120 Glutamine synthetase, catalytic domain IX88_RS13035 PF00072 Response regulator receiver domain IX88_RS13035 PF00486 Transcriptional regulatory protein, C terminal IX88_RS13040 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS13040 PF00582 Universal stress protein family IX88_RS13040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS13040 PF02702 Osmosensitive K+ channel His kinase sensor domain IX88_RS13040 PF13493 Domain of unknown function (DUF4118) IX88_RS13045 PF02669 IX88_RS13045 IX88_RS13050 PF00122 E1-E2 ATPase IX88_RS13050 PF00702 haloacid dehalogenase-like hydrolase IX88_RS13055 PF03814 IX88_RS13055 IX88_RS13060 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IX88_RS13065 PF02152 Dihydroneopterin aldolase IX88_RS13070 PF03109 IX88_RS13070 IX88_RS13075 PF00899 ThiF family IX88_RS13080 PF01613 Flavin reductase like domain IX88_RS13085 PF00501 AMP-binding enzyme IX88_RS13085 PF13193 AMP-binding enzyme C-terminal domain IX88_RS13090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS13090 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS13090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS13095 PF00106 short chain dehydrogenase IX88_RS13100 PF12625 IX88_RS13100 IX88_RS13100 PF12833 Helix-turn-helix domain IX88_RS13105 PF09084 NMT1/THI5 like IX88_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS13115 PF05175 Methyltransferase small domain IX88_RS13120 PF00472 RF-1 domain IX88_RS13120 PF03462 PCRF domain IX88_RS13125 PF17124 IX88_RS13125 IX88_RS13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS13130 PF03466 LysR substrate binding domain IX88_RS13145 PF00296 Luciferase-like monooxygenase IX88_RS13155 PF13994 IX88_RS13155 IX88_RS13160 PF13641 Glycosyltransferase like family 2 IX88_RS13165 PF01522 Polysaccharide deacetylase IX88_RS13165 PF14883 Hypothetical glycosyl hydrolase family 13 IX88_RS13175 PF03618 IX88_RS13175 IX88_RS13180 PF00391 PEP-utilising enzyme, mobile domain IX88_RS13180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IX88_RS13180 PF02896 PEP-utilising enzyme, TIM barrel domain IX88_RS13185 PF06271 IX88_RS13185 IX88_RS13185 PF14237 IX88_RS13185 IX88_RS13190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IX88_RS13190 PF06481 COX Aromatic Rich Motif IX88_RS13195 PF00115 Cytochrome C and Quinol oxidase polypeptide I IX88_RS13200 PF00510 Cytochrome c oxidase subunit III IX88_RS13205 PF03626 IX88_RS13205 IX88_RS13210 PF01040 UbiA prenyltransferase family IX88_RS13215 PF01250 Ribosomal protein S6 IX88_RS13220 PF01084 Ribosomal protein S18 IX88_RS13225 PF01281 Ribosomal protein L9, N-terminal domain IX88_RS13225 PF03948 Ribosomal protein L9, C-terminal domain IX88_RS13230 PF00772 DnaB-like helicase N terminal domain IX88_RS13230 PF03796 DnaB-like helicase C terminal domain IX88_RS13235 PF00842 Alanine racemase, C-terminal domain IX88_RS13235 PF01168 Alanine racemase, N-terminal domain IX88_RS13240 PF00227 Proteasome subunit IX88_RS13245 PF01841 Transglutaminase-like superfamily IX88_RS13245 PF08379 IX88_RS13245 IX88_RS13250 PF04168 IX88_RS13250 IX88_RS13255 PF14403 IX88_RS13255 IX88_RS13260 PF13280 IX88_RS13260 IX88_RS13265 PF01134 Glucose inhibited division protein A IX88_RS13265 PF13932 GidA associated domain 3 IX88_RS13275 PF06325 Ribosomal protein L11 methyltransferase (PrmA) IX88_RS13280 PF11906 IX88_RS13280 IX88_RS13285 PF02954 Bacterial regulatory protein, Fis family IX88_RS13290 PF01808 AICARFT/IMPCHase bienzyme IX88_RS13290 PF02142 MGS-like domain IX88_RS13295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IX88_RS13295 PF02843 Phosphoribosylglycinamide synthetase, C domain IX88_RS13295 PF02844 Phosphoribosylglycinamide synthetase, N domain IX88_RS13300 PF03180 NLPA lipoprotein IX88_RS13305 PF00005 ABC transporter IX88_RS13305 PF09383 NIL domain IX88_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS13315 PF00753 Metallo-beta-lactamase superfamily IX88_RS13315 PF16123 IX88_RS13315 IX88_RS13325 PF00375 Sodium:dicarboxylate symporter family IX88_RS13330 PF00440 Bacterial regulatory proteins, tetR family IX88_RS13330 PF16859 IX88_RS13330 IX88_RS13335 PF07690 Major Facilitator Superfamily IX88_RS13340 PF13673 Acetyltransferase (GNAT) domain IX88_RS13345 PF07995 Glucose / Sorbosone dehydrogenase IX88_RS13350 PF00892 EamA-like transporter family IX88_RS13355 PF01177 Asp/Glu/Hydantoin racemase IX88_RS13360 PF13302 Acetyltransferase (GNAT) domain IX88_RS13370 PF16036 IX88_RS13370 IX88_RS13375 PF00072 Response regulator receiver domain IX88_RS13375 PF00486 Transcriptional regulatory protein, C terminal IX88_RS13380 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS13385 PF02353 Mycolic acid cyclopropane synthetase IX88_RS13390 PF06966 IX88_RS13390 IX88_RS13395 PF02353 Mycolic acid cyclopropane synthetase IX88_RS13400 PF07103 IX88_RS13400 IX88_RS13405 PF13450 NAD(P)-binding Rossmann-like domain IX88_RS13410 PF00487 IX88_RS13410 IX88_RS13415 PF08212 Lipocalin-like domain IX88_RS13420 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS13425 PF00072 Response regulator receiver domain IX88_RS13425 PF00486 Transcriptional regulatory protein, C terminal IX88_RS13430 PF03928 Domain of unknown function (DUF336) IX88_RS13435 PF00576 HIUase/Transthyretin family IX88_RS13440 PF03886 Protein of unknown function (DUF330) IX88_RS13445 PF02470 IX88_RS13445 IX88_RS13450 PF04403 IX88_RS13450 IX88_RS13455 PF04403 IX88_RS13455 IX88_RS13460 PF00892 EamA-like transporter family IX88_RS13465 PF00440 Bacterial regulatory proteins, tetR family IX88_RS13470 PF13302 Acetyltransferase (GNAT) domain IX88_RS13475 PF01966 HD domain IX88_RS13480 PF00083 Sugar (and other) transporter IX88_RS13480 PF08946 Osmosensory transporter coiled coil IX88_RS13490 PF05229 IX88_RS13490 IX88_RS13495 PF00577 Outer membrane usher protein IX88_RS13495 PF13953 PapC C-terminal domain IX88_RS13500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IX88_RS13505 PF05229 IX88_RS13505 IX88_RS13510 PF05229 IX88_RS13510 IX88_RS13515 PF05229 IX88_RS13515 IX88_RS13520 PF00440 Bacterial regulatory proteins, tetR family IX88_RS13530 PF00392 Bacterial regulatory proteins, gntR family IX88_RS13530 PF07729 FCD domain IX88_RS13535 PF05673 Protein of unknown function (DUF815) IX88_RS13540 PF03616 IX88_RS13540 IX88_RS13545 PF00561 alpha/beta hydrolase fold IX88_RS13550 PF02311 AraC-like ligand binding domain IX88_RS13550 PF12833 Helix-turn-helix domain IX88_RS13555 PF01810 IX88_RS13555 IX88_RS13565 PF04940 Sensors of blue-light using FAD IX88_RS13570 PF04076 Bacterial OB fold (BOF) protein IX88_RS13575 PF00535 Glycosyl transferase family 2 IX88_RS13580 PF05401 Nodulation protein S (NodS) IX88_RS13585 PF02585 GlcNAc-PI de-N-acetylase IX88_RS13595 PF09939 IX88_RS13595 IX88_RS13600 PF00324 Amino acid permease IX88_RS13605 PF00171 Aldehyde dehydrogenase family IX88_RS13610 PF00202 Aminotransferase class-III IX88_RS13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS13615 PF03466 LysR substrate binding domain IX88_RS13625 PF00440 Bacterial regulatory proteins, tetR family IX88_RS13630 PF15575 IX88_RS13630 IX88_RS13645 PF05594 IX88_RS13645 IX88_RS13645 PF13018 IX88_RS13645 IX88_RS13650 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IX88_RS13650 PF08479 POTRA domain, ShlB-type IX88_RS13675 PF00069 Protein kinase domain IX88_RS13680 PF01734 Patatin-like phospholipase IX88_RS13680 PF11815 IX88_RS13680 IX88_RS13685 PF05673 Protein of unknown function (DUF815) IX88_RS13695 PF00814 Glycoprotease family IX88_RS13700 PF01165 Ribosomal protein S21 IX88_RS13705 PF09424 Yqey-like protein IX88_RS13710 PF01435 Peptidase family M48 IX88_RS13715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX88_RS13715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX88_RS13725 PF01435 Peptidase family M48 IX88_RS13730 PF00156 Phosphoribosyl transferase domain IX88_RS13730 PF13522 Glutamine amidotransferase domain IX88_RS13735 PF02674 IX88_RS13735 IX88_RS13740 PF01180 Dihydroorotate dehydrogenase IX88_RS13745 PF04612 Type II secretion system (T2SS), protein M IX88_RS13750 PF05134 Type II secretion system (T2SS), protein L IX88_RS13750 PF12693 GspL periplasmic domain IX88_RS13760 PF05838 Glycosyl hydrolase 108 IX88_RS13760 PF09374 Predicted Peptidoglycan domain IX88_RS13785 PF04383 KilA-N domain IX88_RS13790 PF03869 Arc-like DNA binding domain IX88_RS13810 PF11039 IX88_RS13810 IX88_RS13825 PF11134 IX88_RS13825 IX88_RS13835 PF11650 P22 tail accessory factor IX88_RS13845 PF11651 P22 coat protein - gene protein 5 IX88_RS13855 PF16510 IX88_RS13855 IX88_RS13860 PF03237 Terminase-like family IX88_RS13865 PF03592 Terminase small subunit IX88_RS13885 PF06147 IX88_RS13885 IX88_RS13950 PF00772 DnaB-like helicase N terminal domain IX88_RS13950 PF03796 DnaB-like helicase C terminal domain IX88_RS13955 PF00392 Bacterial regulatory proteins, gntR family IX88_RS13965 PF14549 DNA-binding transcriptional regulator Cro IX88_RS13970 PF00717 Peptidase S24-like IX88_RS13970 PF01381 Helix-turn-helix IX88_RS14005 PF03837 IX88_RS14005 IX88_RS14035 PF00589 Phage integrase family IX88_RS14040 PF00300 Histidine phosphatase superfamily (branch 1) IX88_RS14045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IX88_RS14045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IX88_RS14050 PF00881 Nitroreductase family IX88_RS14060 PF00270 DEAD/DEAH box helicase IX88_RS14060 PF00271 Helicase conserved C-terminal domain IX88_RS14065 PF00313 'Cold-shock' DNA-binding domain IX88_RS14070 PF01206 Sulfurtransferase TusA IX88_RS14075 PF00140 Sigma-70 factor, region 1 IX88_RS14075 PF04542 Sigma-70 region 2 IX88_RS14075 PF04545 Sigma-70, region 4 IX88_RS14080 PF04241 IX88_RS14080 IX88_RS14085 PF02597 ThiS family IX88_RS14090 PF05690 Thiazole biosynthesis protein ThiG IX88_RS14100 PF03883 IX88_RS14100 IX88_RS14110 PF00753 Metallo-beta-lactamase superfamily IX88_RS14115 PF01546 Peptidase family M20/M25/M40 IX88_RS14115 PF07687 Peptidase dimerisation domain IX88_RS14125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IX88_RS14125 PF02153 Prephenate dehydrogenase IX88_RS14130 PF00800 Prephenate dehydratase IX88_RS14130 PF01817 Chorismate mutase type II IX88_RS14130 PF01842 ACT domain IX88_RS14135 PF00756 Putative esterase IX88_RS14140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS14140 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS14140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS14145 PF00375 Sodium:dicarboxylate symporter family IX88_RS14150 PF00591 Glycosyl transferase family, a/b domain IX88_RS14150 PF02885 Glycosyl transferase family, helical bundle domain IX88_RS14155 PF07023 IX88_RS14155 IX88_RS14160 PF01513 ATP-NAD kinase IX88_RS14165 PF00905 Penicillin binding protein transpeptidase domain IX88_RS14165 PF00912 Transglycosylase IX88_RS14165 PF14814 Bifunctional transglycosylase second domain IX88_RS14175 PF00293 NUDIX domain IX88_RS14175 PF02581 Thiamine monophosphate synthase/TENI IX88_RS14180 PF10636 Hemin uptake protein hemP IX88_RS14185 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS14190 PF00072 Response regulator receiver domain IX88_RS14190 PF00486 Transcriptional regulatory protein, C terminal IX88_RS14195 PF04076 Bacterial OB fold (BOF) protein IX88_RS14200 PF00437 Type II/IV secretion system protein IX88_RS14200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IX88_RS14205 PF02308 IX88_RS14205 IX88_RS14205 PF13194 IX88_RS14205 IX88_RS14210 PF01980 Uncharacterised protein family UPF0066 IX88_RS14215 PF00175 Oxidoreductase NAD-binding domain IX88_RS14215 PF00970 Oxidoreductase FAD-binding domain IX88_RS14220 PF02567 Phenazine biosynthesis-like protein IX88_RS14225 PF00155 Aminotransferase class I and II IX88_RS14225 PF00392 Bacterial regulatory proteins, gntR family IX88_RS14230 PF01136 IX88_RS14230 IX88_RS14230 PF16325 IX88_RS14230 IX88_RS14240 PF00893 Small Multidrug Resistance protein IX88_RS14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS14245 PF03466 LysR substrate binding domain IX88_RS14250 PF16576 IX88_RS14250 IX88_RS14255 PF00873 AcrB/AcrD/AcrF family IX88_RS14260 PF02321 Outer membrane efflux protein IX88_RS14265 PF00464 Serine hydroxymethyltransferase IX88_RS14270 PF03583 Secretory lipase IX88_RS14275 PF12843 IX88_RS14275 IX88_RS14290 PF00005 ABC transporter IX88_RS14295 PF01061 IX88_RS14295 IX88_RS14300 PF14489 QueF-like protein IX88_RS14300 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IX88_RS14310 PF01098 IX88_RS14310 IX88_RS14315 PF13406 Transglycosylase SLT domain IX88_RS14320 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel IX88_RS14325 PF06127 IX88_RS14325 IX88_RS14330 PF05437 IX88_RS14330 IX88_RS14335 PF03591 IX88_RS14335 IX88_RS14340 PF02311 AraC-like ligand binding domain IX88_RS14340 PF12833 Helix-turn-helix domain IX88_RS14345 PF11948 IX88_RS14345 IX88_RS14350 PF00889 Elongation factor TS IX88_RS14355 PF00318 Ribosomal protein S2 IX88_RS14360 PF00557 Metallopeptidase family M24 IX88_RS14365 PF03922 OmpW family IX88_RS14370 PF07690 Major Facilitator Superfamily IX88_RS14375 PF07690 Major Facilitator Superfamily IX88_RS14385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX88_RS14385 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS14390 PF04055 Radical SAM superfamily IX88_RS14390 PF16881 IX88_RS14390 IX88_RS14395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS14395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS14395 PF09317 IX88_RS14395 IX88_RS14400 PF02627 Carboxymuconolactone decarboxylase family IX88_RS14405 PF03412 Peptidase C39 family IX88_RS14410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IX88_RS14410 PF05221 S-adenosyl-L-homocysteine hydrolase IX88_RS14415 PF02219 Methylenetetrahydrofolate reductase IX88_RS14420 PF04452 RNA methyltransferase IX88_RS14425 PF00563 EAL domain IX88_RS14425 PF00989 PAS fold IX88_RS14425 PF00990 GGDEF domain IX88_RS14425 PF08447 PAS fold IX88_RS14430 PF00390 Malic enzyme, N-terminal domain IX88_RS14430 PF01515 Phosphate acetyl/butaryl transferase IX88_RS14430 PF03949 Malic enzyme, NAD binding domain IX88_RS14435 PF01743 Poly A polymerase head domain IX88_RS14435 PF12627 Probable RNA and SrmB- binding site of polymerase A IX88_RS14440 PF13180 PDZ domain IX88_RS14440 PF13365 Trypsin-like peptidase domain IX88_RS14445 PF01784 NIF3 (NGG1p interacting factor 3) IX88_RS14450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IX88_RS14450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IX88_RS14470 PF10881 IX88_RS14470 IX88_RS14480 PF03583 Secretory lipase IX88_RS14485 PF01040 UbiA prenyltransferase family IX88_RS14490 PF04345 Chorismate lyase IX88_RS14495 PF00120 Glutamine synthetase, catalytic domain IX88_RS14495 PF03951 Glutamine synthetase, beta-Grasp domain IX88_RS14500 PF00854 POT family IX88_RS14505 PF00557 Metallopeptidase family M24 IX88_RS14505 PF01321 Creatinase/Prolidase N-terminal domain IX88_RS14505 PF16188 IX88_RS14505 IX88_RS14505 PF16189 IX88_RS14505 IX88_RS14510 PF00589 Phage integrase family IX88_RS14510 PF13356 Domain of unknown function (DUF4102) IX88_RS14520 PF05838 Glycosyl hydrolase 108 IX88_RS14520 PF09374 Predicted Peptidoglycan domain IX88_RS14540 PF13550 IX88_RS14540 IX88_RS14545 PF00877 NlpC/P60 family IX88_RS14550 PF00149 Calcineurin-like phosphoesterase IX88_RS14555 PF08757 IX88_RS14555 IX88_RS14560 PF09356 IX88_RS14560 IX88_RS14560 PF09931 IX88_RS14560 IX88_RS14565 PF09343 IX88_RS14565 IX88_RS14575 PF05154 IX88_RS14575 IX88_RS14610 PF13262 IX88_RS14610 IX88_RS14620 PF09950 IX88_RS14620 IX88_RS14630 PF09979 IX88_RS14630 IX88_RS14640 PF04233 IX88_RS14640 IX88_RS14645 PF06381 IX88_RS14645 IX88_RS14650 PF03237 Terminase-like family IX88_RS14655 PF10045 IX88_RS14655 IX88_RS14665 PF00665 Integrase core domain IX88_RS14665 PF13276 IX88_RS14665 IX88_RS14670 PF01527 Transposase IX88_RS14700 PF06356 IX88_RS14700 IX88_RS14720 PF01695 IstB-like ATP binding protein IX88_RS14755 PF00717 Peptidase S24-like IX88_RS14770 PF13619 IX88_RS14770 IX88_RS14790 PF13479 IX88_RS14790 IX88_RS14825 PF00117 Glutamine amidotransferase class-I IX88_RS14830 PF01433 Peptidase family M1 IX88_RS14830 PF11838 ERAP1-like C-terminal domain IX88_RS14835 PF00593 TonB dependent receptor IX88_RS14835 PF07715 TonB-dependent Receptor Plug Domain IX88_RS14840 PF00591 Glycosyl transferase family, a/b domain IX88_RS14840 PF02885 Glycosyl transferase family, helical bundle domain IX88_RS14845 PF00218 Indole-3-glycerol phosphate synthase IX88_RS14850 PF01713 Smr domain IX88_RS14855 PF02625 XdhC and CoxI family IX88_RS14855 PF13478 XdhC Rossmann domain IX88_RS14860 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IX88_RS14860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IX88_RS14865 PF00941 FAD binding domain in molybdopterin dehydrogenase IX88_RS14865 PF01799 [2Fe-2S] binding domain IX88_RS14865 PF03450 CO dehydrogenase flavoprotein C-terminal domain IX88_RS14870 PF01227 GTP cyclohydrolase I IX88_RS14875 PF00144 Beta-lactamase IX88_RS14880 PF13387 IX88_RS14880 IX88_RS14885 PF11220 IX88_RS14885 IX88_RS14890 PF05675 IX88_RS14890 IX88_RS14895 PF01208 Uroporphyrinogen decarboxylase (URO-D) IX88_RS14900 PF01471 Putative peptidoglycan binding domain IX88_RS14900 PF03734 L,D-transpeptidase catalytic domain IX88_RS14905 PF00425 chorismate binding enzyme IX88_RS14910 PF01648 4'-phosphopantetheinyl transferase superfamily IX88_RS14915 PF00975 Thioesterase domain IX88_RS14920 PF00005 ABC transporter IX88_RS14920 PF00664 ABC transporter transmembrane region IX88_RS14925 PF00005 ABC transporter IX88_RS14925 PF00664 ABC transporter transmembrane region IX88_RS14935 PF00282 Pyridoxal-dependent decarboxylase conserved domain IX88_RS14940 PF00550 Phosphopantetheine attachment site IX88_RS14940 PF00857 Isochorismatase family IX88_RS14945 PF00501 AMP-binding enzyme IX88_RS14945 PF13193 AMP-binding enzyme C-terminal domain IX88_RS14950 PF00668 Condensation domain IX88_RS14950 PF08415 IX88_RS14950 IX88_RS14955 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IX88_RS14960 PF00593 TonB dependent receptor IX88_RS14960 PF07715 TonB-dependent Receptor Plug Domain IX88_RS14965 PF01497 Periplasmic binding protein IX88_RS14970 PF00005 ABC transporter IX88_RS14975 PF01032 FecCD transport family IX88_RS14980 PF01032 FecCD transport family IX88_RS14985 PF00550 Phosphopantetheine attachment site IX88_RS14985 PF00668 Condensation domain IX88_RS14990 PF00501 AMP-binding enzyme IX88_RS14990 PF13193 AMP-binding enzyme C-terminal domain IX88_RS14995 PF04954 Siderophore-interacting protein IX88_RS14995 PF08021 Siderophore-interacting FAD-binding domain IX88_RS15000 PF08348 IX88_RS15000 IX88_RS15000 PF13309 IX88_RS15000 IX88_RS15005 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS15010 PF02678 Pirin IX88_RS15015 PF00440 Bacterial regulatory proteins, tetR family IX88_RS15035 PF04328 IX88_RS15035 IX88_RS15040 PF02554 IX88_RS15040 IX88_RS15040 PF13722 IX88_RS15040 IX88_RS15045 PF01132 Elongation factor P (EF-P) OB domain IX88_RS15045 PF08207 Elongation factor P (EF-P) KOW-like domain IX88_RS15045 PF09285 Elongation factor P, C-terminal IX88_RS15050 PF04055 Radical SAM superfamily IX88_RS15050 PF13394 4Fe-4S single cluster domain IX88_RS15060 PF00563 EAL domain IX88_RS15065 PF01197 Ribosomal protein L31 IX88_RS15070 PF13593 SBF-like CPA transporter family (DUF4137) IX88_RS15075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX88_RS15080 PF07690 Major Facilitator Superfamily IX88_RS15085 PF05362 Lon protease (S16) C-terminal proteolytic domain IX88_RS15085 PF13654 AAA domain IX88_RS15090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS15090 PF03466 LysR substrate binding domain IX88_RS15095 PF01476 LysM domain IX88_RS15095 PF01551 Peptidase family M23 IX88_RS15100 PF01975 Survival protein SurE IX88_RS15115 PF00768 D-alanyl-D-alanine carboxypeptidase IX88_RS15115 PF07943 Penicillin-binding protein 5, C-terminal domain IX88_RS15120 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS15125 PF00293 NUDIX domain IX88_RS15130 PF03054 tRNA methyl transferase IX88_RS15135 PF04356 Protein of unknown function (DUF489) IX88_RS15140 PF00206 Lyase IX88_RS15140 PF08328 Adenylosuccinate lyase C-terminal IX88_RS15145 PF09997 IX88_RS15145 IX88_RS15155 PF01343 Peptidase family S49 IX88_RS15155 PF08496 IX88_RS15155 IX88_RS15160 PF00005 ABC transporter IX88_RS15165 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS15165 PF11812 IX88_RS15165 IX88_RS15170 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS15170 PF12501 IX88_RS15170 IX88_RS15175 PF12849 PBP superfamily domain IX88_RS15180 PF00324 Amino acid permease IX88_RS15185 PF00205 Thiamine pyrophosphate enzyme, central domain IX88_RS15185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX88_RS15185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX88_RS15190 PF01037 AsnC family IX88_RS15190 PF13404 AsnC-type helix-turn-helix domain IX88_RS15195 PF00171 Aldehyde dehydrogenase family IX88_RS15200 PF00282 Pyridoxal-dependent decarboxylase conserved domain IX88_RS15205 PF00202 Aminotransferase class-III IX88_RS15210 PF04402 Protein of unknown function (DUF541) IX88_RS15215 PF00440 Bacterial regulatory proteins, tetR family IX88_RS15220 PF14539 Domain of unknown function (DUF4442) IX88_RS15225 PF00487 IX88_RS15225 IX88_RS15230 PF00175 Oxidoreductase NAD-binding domain IX88_RS15230 PF00970 Oxidoreductase FAD-binding domain IX88_RS15235 PF00440 Bacterial regulatory proteins, tetR family IX88_RS15240 PF01594 IX88_RS15240 IX88_RS15245 PF00176 SNF2 family N-terminal domain IX88_RS15245 PF00271 Helicase conserved C-terminal domain IX88_RS15245 PF12137 RNA polymerase recycling family C-terminal IX88_RS15250 PF00849 RNA pseudouridylate synthase IX88_RS15260 PF00202 Aminotransferase class-III IX88_RS15265 PF02581 Thiamine monophosphate synthase/TENI IX88_RS15270 PF06127 IX88_RS15270 IX88_RS15275 PF01928 CYTH domain IX88_RS15275 PF05235 CHAD domain IX88_RS15285 PF11342 Protein of unknown function (DUF3144) IX88_RS15290 PF00675 Insulinase (Peptidase family M16) IX88_RS15290 PF05193 Peptidase M16 inactive domain IX88_RS15295 PF02567 Phenazine biosynthesis-like protein IX88_RS15300 PF00375 Sodium:dicarboxylate symporter family IX88_RS15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS15305 PF03466 LysR substrate binding domain IX88_RS15310 PF06779 IX88_RS15310 IX88_RS15325 PF00180 Isocitrate/isopropylmalate dehydrogenase IX88_RS15330 PF00849 RNA pseudouridylate synthase IX88_RS15335 PF03971 Monomeric isocitrate dehydrogenase IX88_RS15340 PF05299 M61 glycyl aminopeptidase IX88_RS15345 PF00768 D-alanyl-D-alanine carboxypeptidase IX88_RS15350 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS15355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX88_RS15360 PF00875 DNA photolyase IX88_RS15360 PF03441 FAD binding domain of DNA photolyase IX88_RS15375 PF13641 Glycosyltransferase like family 2 IX88_RS15390 PF02350 UDP-N-acetylglucosamine 2-epimerase IX88_RS15400 PF01988 IX88_RS15400 IX88_RS15405 PF03060 Nitronate monooxygenase IX88_RS15410 PF01207 Dihydrouridine synthase (Dus) IX88_RS15415 PF07759 IX88_RS15415 IX88_RS15420 PF12710 haloacid dehalogenase-like hydrolase IX88_RS15425 PF00696 Amino acid kinase family IX88_RS15425 PF01472 PUA domain IX88_RS15430 PF01018 GTP1/OBG IX88_RS15430 PF01926 50S ribosome-binding GTPase IX88_RS15445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX88_RS15445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX88_RS15450 PF00892 EamA-like transporter family IX88_RS15455 PF08212 Lipocalin-like domain IX88_RS15460 PF00271 Helicase conserved C-terminal domain IX88_RS15460 PF02151 UvrB/uvrC motif IX88_RS15460 PF04851 Type III restriction enzyme, res subunit IX88_RS15460 PF12344 Ultra-violet resistance protein B IX88_RS15470 PF00990 GGDEF domain IX88_RS15470 PF13188 PAS domain IX88_RS15470 PF13426 PAS domain IX88_RS15480 PF00155 Aminotransferase class I and II IX88_RS15485 PF04828 Glutathione-dependent formaldehyde-activating enzyme IX88_RS15490 PF03061 Thioesterase superfamily IX88_RS15505 PF00106 short chain dehydrogenase IX88_RS15510 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IX88_RS15515 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IX88_RS15520 PF02565 Recombination protein O C terminal IX88_RS15520 PF11967 Recombination protein O N terminal IX88_RS15530 PF01926 50S ribosome-binding GTPase IX88_RS15530 PF07650 KH domain IX88_RS15535 PF00035 Double-stranded RNA binding motif IX88_RS15535 PF14622 Ribonuclease-III-like IX88_RS15540 PF16137 IX88_RS15540 IX88_RS15545 PF00717 Peptidase S24-like IX88_RS15545 PF10502 Signal peptidase, peptidase S26 IX88_RS15550 PF00009 Elongation factor Tu GTP binding domain IX88_RS15550 PF00679 Elongation factor G C-terminus IX88_RS15550 PF03144 Elongation factor Tu domain 2 IX88_RS15550 PF06421 GTP-binding protein LepA C-terminus IX88_RS15555 PF13279 Thioesterase-like superfamily IX88_RS15560 PF13180 PDZ domain IX88_RS15560 PF13365 Trypsin-like peptidase domain IX88_RS15565 PF00890 FAD binding domain IX88_RS15565 PF02910 Fumarate reductase flavoprotein C-term IX88_RS15570 PF03061 Thioesterase superfamily IX88_RS15575 PF02223 Thymidylate kinase IX88_RS15580 PF02618 YceG-like family IX88_RS15585 PF01063 Aminotransferase class IV IX88_RS15590 PF13531 Bacterial extracellular solute-binding protein IX88_RS15595 PF06821 Serine hydrolase IX88_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS15605 PF00528 Binding-protein-dependent transport system inner membrane component IX88_RS15610 PF00005 ABC transporter IX88_RS15610 PF12857 IX88_RS15610 IX88_RS15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS15615 PF03466 LysR substrate binding domain IX88_RS15625 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS15625 PF14602 Hexapeptide repeat of succinyl-transferase IX88_RS15625 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IX88_RS15630 PF04055 Radical SAM superfamily IX88_RS15630 PF13394 4Fe-4S single cluster domain IX88_RS15635 PF06508 Queuosine biosynthesis protein QueC IX88_RS15645 PF01902 ATP-binding region IX88_RS15650 PF00578 AhpC/TSA family IX88_RS15655 PF00188 Cysteine-rich secretory protein family IX88_RS15660 PF01467 Cytidylyltransferase IX88_RS15665 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS15680 PF07690 Major Facilitator Superfamily IX88_RS15685 PF02769 AIR synthase related protein, C-terminal domain IX88_RS15685 PF13507 CobB/CobQ-like glutamine amidotransferase domain IX88_RS15690 PF01966 HD domain IX88_RS15695 PF01330 RuvA N terminal domain IX88_RS15695 PF07499 RuvA, C-terminal domain IX88_RS15695 PF14520 Helix-hairpin-helix domain IX88_RS15700 PF05491 Holliday junction DNA helicase ruvB C-terminus IX88_RS15700 PF05496 Holliday junction DNA helicase ruvB N-terminus IX88_RS15705 PF01546 Peptidase family M20/M25/M40 IX88_RS15705 PF07687 Peptidase dimerisation domain IX88_RS15710 PF03061 Thioesterase superfamily IX88_RS15715 PF01618 IX88_RS15715 IX88_RS15720 PF02472 Biopolymer transport protein ExbD/TolR IX88_RS15725 PF13103 TonB C terminal IX88_RS15730 PF04052 TolB amino-terminal domain IX88_RS15730 PF07676 WD40-like Beta Propeller Repeat IX88_RS15735 PF00691 OmpA family IX88_RS15745 PF00316 Fructose-1-6-bisphosphatase IX88_RS15750 PF00588 SpoU rRNA Methylase family IX88_RS15755 PF04542 Sigma-70 region 2 IX88_RS15755 PF08281 Sigma-70, region 4 IX88_RS15765 PF11304 IX88_RS15765 IX88_RS15780 PF00308 Bacterial dnaA protein IX88_RS15785 PF01594 IX88_RS15785 IX88_RS15790 PF00586 AIR synthase related protein, N-terminal domain IX88_RS15790 PF02769 AIR synthase related protein, C-terminal domain IX88_RS15795 PF00551 Formyl transferase IX88_RS15800 PF12697 Alpha/beta hydrolase family IX88_RS15805 PF01343 Peptidase family S49 IX88_RS15810 PF03279 IX88_RS15810 IX88_RS15815 PF00753 Metallo-beta-lactamase superfamily IX88_RS15815 PF03772 IX88_RS15815 IX88_RS15815 PF13567 IX88_RS15815 IX88_RS15820 PF00005 ABC transporter IX88_RS15825 PF02687 IX88_RS15825 IX88_RS15825 PF12704 MacB-like periplasmic core domain IX88_RS15830 PF00892 EamA-like transporter family IX88_RS15835 PF02639 IX88_RS15835 IX88_RS15845 PF00266 Aminotransferase class-V IX88_RS15850 PF02321 Outer membrane efflux protein IX88_RS15855 PF16576 IX88_RS15855 IX88_RS15860 PF12698 ABC-2 family transporter protein IX88_RS15865 PF12698 ABC-2 family transporter protein IX88_RS15870 PF04794 YdjC-like protein IX88_RS15875 PF00535 Glycosyl transferase family 2 IX88_RS15880 PF04138 IX88_RS15880 IX88_RS15885 PF13231 IX88_RS15885 IX88_RS15890 PF00521 DNA gyrase/topoisomerase IV, subunit A IX88_RS15890 PF03989 DNA gyrase C-terminal domain, beta-propeller IX88_RS15895 PF00766 Electron transfer flavoprotein FAD-binding domain IX88_RS15895 PF01012 Electron transfer flavoprotein domain IX88_RS15900 PF01012 Electron transfer flavoprotein domain IX88_RS15905 PF00589 Phage integrase family IX88_RS15905 PF02899 Phage integrase, N-terminal SAM-like domain IX88_RS15910 PF01810 IX88_RS15910 IX88_RS15915 PF01678 Diaminopimelate epimerase IX88_RS15920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IX88_RS15920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IX88_RS15930 PF00324 Amino acid permease IX88_RS15935 PF06745 KaiC IX88_RS15935 PF13541 Subunit ChlI of Mg-chelatase IX88_RS15940 PF04280 Tim44-like domain IX88_RS15945 PF00152 tRNA synthetases class II (D, K and N) IX88_RS15950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX88_RS15950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX88_RS15950 PF11890 Domain of unknown function (DUF3410) IX88_RS15955 PF06803 IX88_RS15955 IX88_RS15960 PF02634 FdhD/NarQ family IX88_RS15965 PF00384 Molybdopterin oxidoreductase IX88_RS15965 PF01568 Molydopterin dinucleotide binding domain IX88_RS15970 PF02595 Glycerate kinase family IX88_RS15975 PF00440 Bacterial regulatory proteins, tetR family IX88_RS15980 PF00106 short chain dehydrogenase IX88_RS15985 PF00881 Nitroreductase family IX88_RS15990 PF00440 Bacterial regulatory proteins, tetR family IX88_RS15995 PF10118 IX88_RS15995 IX88_RS16000 PF00440 Bacterial regulatory proteins, tetR family IX88_RS16005 PF13518 Helix-turn-helix domain IX88_RS16010 PF00665 Integrase core domain IX88_RS16010 PF13276 IX88_RS16010 IX88_RS16025 PF13411 MerR HTH family regulatory protein IX88_RS16030 PF02567 Phenazine biosynthesis-like protein IX88_RS16040 PF00501 AMP-binding enzyme IX88_RS16040 PF13193 AMP-binding enzyme C-terminal domain IX88_RS16045 PF14534 Domain of unknown function (DUF4440) IX88_RS16050 PF05954 Phage late control gene D protein (GPD) IX88_RS16050 PF10106 IX88_RS16050 IX88_RS16050 PF13296 IX88_RS16050 IX88_RS16055 PF00440 Bacterial regulatory proteins, tetR family IX88_RS16065 PF09588 YqaJ-like viral recombinase domain IX88_RS16070 PF06067 IX88_RS16070 IX88_RS16075 PF05656 IX88_RS16075 IX88_RS16105 PF11726 IX88_RS16105 IX88_RS16120 PF11112 IX88_RS16120 IX88_RS16125 PF05930 Prophage CP4-57 regulatory protein (AlpA) IX88_RS16135 PF00589 Phage integrase family IX88_RS16135 PF13356 Domain of unknown function (DUF4102) IX88_RS16145 PF01272 Transcription elongation factor, GreA/GreB, C-term IX88_RS16145 PF03449 Transcription elongation factor, N-terminal IX88_RS16150 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX88_RS16150 PF01464 Transglycosylase SLT domain IX88_RS16155 PF02036 SCP-2 sterol transfer family IX88_RS16160 PF01171 PP-loop family IX88_RS16165 PF01464 Transglycosylase SLT domain IX88_RS16170 PF01435 Peptidase family M48 IX88_RS16175 PF13430 IX88_RS16175 IX88_RS16180 PF00873 AcrB/AcrD/AcrF family IX88_RS16185 PF03009 Glycerophosphoryl diester phosphodiesterase family IX88_RS16190 PF00753 Metallo-beta-lactamase superfamily IX88_RS16195 PF01219 Prokaryotic diacylglycerol kinase IX88_RS16200 PF00118 TCP-1/cpn60 chaperonin family IX88_RS16205 PF00166 Chaperonin 10 Kd subunit IX88_RS16210 PF00149 Calcineurin-like phosphoesterase IX88_RS16215 PF00781 Diacylglycerol kinase catalytic domain IX88_RS16220 PF00821 Phosphoenolpyruvate carboxykinase IX88_RS16225 PF01266 FAD dependent oxidoreductase IX88_RS16225 PF16901 IX88_RS16225 IX88_RS16230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IX88_RS16230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IX88_RS16235 PF00083 Sugar (and other) transporter IX88_RS16245 PF06325 Ribosomal protein L11 methyltransferase (PrmA) IX88_RS16250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IX88_RS16250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IX88_RS16265 PF09423 PhoD-like phosphatase IX88_RS16265 PF16655 IX88_RS16265 IX88_RS16285 PF00809 Pterin binding enzyme IX88_RS16290 PF00004 ATPase family associated with various cellular activities (AAA) IX88_RS16290 PF01434 Peptidase family M41 IX88_RS16290 PF06480 FtsH Extracellular IX88_RS16295 PF01728 FtsJ-like methyltransferase IX88_RS16300 PF01985 CRS1 / YhbY (CRM) domain IX88_RS16315 PF00117 Glutamine amidotransferase class-I IX88_RS16315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IX88_RS16320 PF02142 MGS-like domain IX88_RS16320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX88_RS16320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IX88_RS16325 PF01272 Transcription elongation factor, GreA/GreB, C-term IX88_RS16325 PF03449 Transcription elongation factor, N-terminal IX88_RS16330 PF00132 Bacterial transferase hexapeptide (six repeats) IX88_RS16335 PF00582 Universal stress protein family IX88_RS16340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IX88_RS16350 PF09587 Bacterial capsule synthesis protein PGA_cap IX88_RS16365 PF00999 Sodium/hydrogen exchanger family IX88_RS16370 PF04228 IX88_RS16370 IX88_RS16375 PF05661 IX88_RS16375 IX88_RS16380 PF00579 tRNA synthetases class I (W and Y) IX88_RS16385 PF00549 CoA-ligase IX88_RS16385 PF02629 CoA binding domain IX88_RS16390 PF00549 CoA-ligase IX88_RS16390 PF08442 ATP-grasp domain IX88_RS16395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX88_RS16395 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS16400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX88_RS16400 PF00364 Biotin-requiring enzyme IX88_RS16400 PF02817 e3 binding domain IX88_RS16405 PF00676 Dehydrogenase E1 component IX88_RS16405 PF02779 Transketolase, pyrimidine binding domain IX88_RS16405 PF16078 IX88_RS16405 IX88_RS16405 PF16870 IX88_RS16405 IX88_RS16410 PF13085 2Fe-2S iron-sulfur cluster binding domain IX88_RS16410 PF13534 4Fe-4S dicluster domain IX88_RS16415 PF00890 FAD binding domain IX88_RS16415 PF02910 Fumarate reductase flavoprotein C-term IX88_RS16420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IX88_RS16425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IX88_RS16430 PF00285 Citrate synthase IX88_RS16435 PF06945 IX88_RS16435 IX88_RS16440 PF00581 Rhodanese-like domain IX88_RS16445 PF03695 Uncharacterised protein family (UPF0149) IX88_RS16455 PF00140 Sigma-70 factor, region 1 IX88_RS16455 PF03979 Sigma-70 factor, region 1 IX88_RS16455 PF04539 Sigma-70 region 3 IX88_RS16455 PF04542 Sigma-70 region 2 IX88_RS16455 PF04545 Sigma-70, region 4 IX88_RS16455 PF04546 Sigma-70, non-essential region IX88_RS16460 PF04359 Protein of unknown function (DUF493) IX88_RS16465 PF03099 Biotin/lipoate A/B protein ligase family IX88_RS16475 PF00465 Iron-containing alcohol dehydrogenase IX88_RS16480 PF00324 Amino acid permease IX88_RS16485 PF12724 Flavodoxin domain IX88_RS16490 PF01638 HxlR-like helix-turn-helix IX88_RS16495 PF00588 SpoU rRNA Methylase family IX88_RS16500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX88_RS16500 PF10414 Sirohaem synthase dimerisation region IX88_RS16500 PF13241 Putative NAD(P)-binding IX88_RS16505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX88_RS16505 PF02403 Seryl-tRNA synthetase N-terminal domain IX88_RS16510 PF11738 Protein of unknown function (DUF3298) IX88_RS16515 PF03548 Outer membrane lipoprotein carrier protein LolA IX88_RS16520 PF01016 Ribosomal L27 protein IX88_RS16525 PF00829 Ribosomal prokaryotic L21 protein IX88_RS16535 PF00348 Polyprenyl synthetase IX88_RS16540 PF10136 IX88_RS16540 IX88_RS16545 PF01569 PAP2 superfamily IX88_RS16550 PF00529 HlyD family secretion protein IX88_RS16550 PF16576 IX88_RS16550 IX88_RS16555 PF00873 AcrB/AcrD/AcrF family IX88_RS16560 PF02321 Outer membrane efflux protein IX88_RS16565 PF01906 Putative heavy-metal-binding IX88_RS16570 PF01906 Putative heavy-metal-binding IX88_RS16575 PF13577 SnoaL-like domain IX88_RS16580 PF00106 short chain dehydrogenase IX88_RS16590 PF00133 tRNA synthetases class I (I, L, M and V) IX88_RS16590 PF08264 Anticodon-binding domain of tRNA IX88_RS16590 PF10458 Valyl tRNA synthetase tRNA binding arm IX88_RS16595 PF13649 Methyltransferase domain IX88_RS16605 PF03547 IX88_RS16605 IX88_RS16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX88_RS16610 PF03466 LysR substrate binding domain IX88_RS16615 PF00909 Ammonium Transporter Family IX88_RS16620 PF01569 PAP2 superfamily IX88_RS16625 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS16630 PF00072 Response regulator receiver domain IX88_RS16630 PF00486 Transcriptional regulatory protein, C terminal IX88_RS16635 PF00884 Sulfatase IX88_RS16635 PF08019 IX88_RS16635 IX88_RS16640 PF02530 IX88_RS16640 IX88_RS16645 PF13000 IX88_RS16645 IX88_RS16650 PF01553 Acyltransferase IX88_RS16655 PF01734 Patatin-like phospholipase IX88_RS16660 PF01957 NfeD-like C-terminal, partner-binding IX88_RS16665 PF01145 SPFH domain / Band 7 family IX88_RS16670 PF04237 YjbR IX88_RS16675 PF00348 Polyprenyl synthetase IX88_RS16680 PF04303 PrpF protein IX88_RS16685 PF00324 Amino acid permease IX88_RS16695 PF01965 DJ-1/PfpI family IX88_RS16700 PF00107 Zinc-binding dehydrogenase IX88_RS16700 PF08240 Alcohol dehydrogenase GroES-like domain IX88_RS16705 PF06719 IX88_RS16705 IX88_RS16705 PF12833 Helix-turn-helix domain IX88_RS16710 PF02673 IX88_RS16710 IX88_RS16715 PF08223 PaaX-like protein C-terminal domain IX88_RS16720 PF00487 IX88_RS16720 IX88_RS16725 PF12625 IX88_RS16725 IX88_RS16725 PF12833 Helix-turn-helix domain IX88_RS16730 PF02525 Flavodoxin-like fold IX88_RS16735 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX88_RS16740 PF12710 haloacid dehalogenase-like hydrolase IX88_RS16745 PF01507 Phosphoadenosine phosphosulfate reductase family IX88_RS16750 PF03007 IX88_RS16750 IX88_RS16750 PF06974 IX88_RS16750 IX88_RS16760 PF00575 S1 RNA binding domain IX88_RS16760 PF10150 Ribonuclease E/G family IX88_RS16765 PF02545 Maf-like protein IX88_RS16770 PF04093 IX88_RS16770 IX88_RS16775 PF04085 rod shape-determining protein MreC IX88_RS16780 PF06723 MreB/Mbl protein IX88_RS16785 PF02686 Glu-tRNAGln amidotransferase C subunit IX88_RS16790 PF01425 Amidase IX88_RS16795 PF02637 GatB domain IX88_RS16795 PF02934 GatB/GatE catalytic domain IX88_RS16800 PF01965 DJ-1/PfpI family IX88_RS16810 PF06674 IX88_RS16810 IX88_RS16815 PF16142 IX88_RS16815 IX88_RS16820 PF05992 IX88_RS16820 IX88_RS16825 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS16830 PF01734 Patatin-like phospholipase IX88_RS16835 PF01235 IX88_RS16835 IX88_RS16845 PF00881 Nitroreductase family IX88_RS16850 PF07690 Major Facilitator Superfamily IX88_RS16855 PF12805 IX88_RS16855 IX88_RS16855 PF13515 IX88_RS16855 IX88_RS16860 PF14317 IX88_RS16860 IX88_RS16865 PF00175 Oxidoreductase NAD-binding domain IX88_RS16865 PF00258 Flavodoxin IX88_RS16865 PF03929 IX88_RS16865 IX88_RS16870 PF02698 DUF218 domain IX88_RS16905 PF03734 L,D-transpeptidase catalytic domain IX88_RS16910 PF04304 IX88_RS16910 IX88_RS16915 PF08907 IX88_RS16915 IX88_RS16920 PF08085 IX88_RS16920 IX88_RS16925 PF01546 Peptidase family M20/M25/M40 IX88_RS16925 PF07687 Peptidase dimerisation domain IX88_RS16935 PF00072 Response regulator receiver domain IX88_RS16935 PF01584 CheW-like domain IX88_RS16935 PF01627 Hpt domain IX88_RS16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX88_RS16945 PF01584 CheW-like domain IX88_RS16950 PF00072 Response regulator receiver domain IX88_RS16955 PF00072 Response regulator receiver domain IX88_RS16965 PF13437 HlyD family secretion protein IX88_RS16965 PF13533 Biotin-lipoyl like IX88_RS16970 PF00873 AcrB/AcrD/AcrF family IX88_RS16975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX88_RS16975 PF03129 Anticodon binding domain IX88_RS16975 PF04073 Aminoacyl-tRNA editing domain IX88_RS16980 PF07411 Domain of unknown function (DUF1508) IX88_RS16985 PF03831 PhnA protein IX88_RS16985 PF08274 PhnA Zinc-Ribbon IX88_RS16990 PF04343 IX88_RS16990 IX88_RS16995 PF08327 Activator of Hsp90 ATPase homolog 1-like protein IX88_RS17000 PF01571 Aminomethyltransferase folate-binding domain IX88_RS17005 PF10411 Disulfide bond isomerase protein N-terminus IX88_RS17005 PF13098 Thioredoxin-like domain IX88_RS17010 PF08238 Sel1 repeat IX88_RS17015 PF03547 IX88_RS17015 IX88_RS17020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX88_RS17025 PF00593 TonB dependent receptor IX88_RS17025 PF07715 TonB-dependent Receptor Plug Domain IX88_RS17030 PF02245 Methylpurine-DNA glycosylase (MPG) IX88_RS17035 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IX88_RS17035 PF06827 Zinc finger found in FPG and IleRS IX88_RS17035 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IX88_RS17040 PF00639 PPIC-type PPIASE domain IX88_RS17045 PF06094 AIG2-like family IX88_RS17050 PF01741 Large-conductance mechanosensitive channel, MscL IX88_RS17055 PF00009 Elongation factor Tu GTP binding domain IX88_RS17055 PF00679 Elongation factor G C-terminus IX88_RS17055 PF03144 Elongation factor Tu domain 2 IX88_RS17060 PF00860 Permease family IX88_RS17065 PF05175 Methyltransferase small domain IX88_RS17065 PF08468 Methyltransferase small domain N-terminal IX88_RS17070 PF00324 Amino acid permease IX88_RS17075 PF01139 tRNA-splicing ligase RtcB IX88_RS17085 PF00691 OmpA family IX88_RS17085 PF13505 Outer membrane protein beta-barrel domain IX88_RS17090 PF12019 Type II transport protein GspH IX88_RS17095 PF00108 Thiolase, N-terminal domain IX88_RS17095 PF02803 Thiolase, C-terminal domain IX88_RS17100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX88_RS17105 PF00893 Small Multidrug Resistance protein IX88_RS17110 PF06073 IX88_RS17110 IX88_RS17115 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX88_RS17115 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX88_RS17120 PF01011 PQQ enzyme repeat IX88_RS17125 PF04966 Carbohydrate-selective porin, OprB family IX88_RS17130 PF02515 CoA-transferase family III IX88_RS17135 PF12625 IX88_RS17135 IX88_RS17135 PF12833 Helix-turn-helix domain IX88_RS17140 PF00108 Thiolase, N-terminal domain IX88_RS17140 PF02803 Thiolase, C-terminal domain IX88_RS17145 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS17145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX88_RS17145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX88_RS17155 PF01734 Patatin-like phospholipase IX88_RS17160 PF13673 Acetyltransferase (GNAT) domain IX88_RS17170 PF03006 IX88_RS17170 IX88_RS17175 PF00083 Sugar (and other) transporter IX88_RS17185 PF01043 SecA preprotein cross-linking domain IX88_RS17185 PF02810 SEC-C motif IX88_RS17185 PF07516 SecA Wing and Scaffold domain IX88_RS17185 PF07517 SecA DEAD-like domain IX88_RS17190 PF00578 AhpC/TSA family IX88_RS17190 PF10417 C-terminal domain of 1-Cys peroxiredoxin IX88_RS17195 PF00753 Metallo-beta-lactamase superfamily IX88_RS17200 PF00782 Dual specificity phosphatase, catalytic domain IX88_RS17205 PF05036 Sporulation related domain IX88_RS17210 PF02875 Mur ligase family, glutamate ligase domain IX88_RS17210 PF08245 Mur ligase middle domain IX88_RS17215 PF01039 Carboxyl transferase domain IX88_RS17220 PF00290 Tryptophan synthase alpha chain IX88_RS17225 PF12625 IX88_RS17225 IX88_RS17225 PF12833 Helix-turn-helix domain IX88_RS17230 PF10118 IX88_RS17230 IX88_RS17235 PF10974 IX88_RS17235 IX88_RS17240 PF07566 Domain of Unknown Function (DUF1543) IX88_RS17245 PF00291 Pyridoxal-phosphate dependent enzyme IX88_RS17250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IX88_RS17255 PF00593 TonB dependent receptor IX88_RS17255 PF07715 TonB-dependent Receptor Plug Domain IX88_RS17260 PF01923 Cobalamin adenosyltransferase IX88_RS17265 PF03009 Glycerophosphoryl diester phosphodiesterase family IX88_RS17270 PF03724 META domain IX88_RS17275 PF00487 IX88_RS17275 IX88_RS17280 PF02696 IX88_RS17280 IX88_RS17285 PF00072 Response regulator receiver domain IX88_RS17285 PF00486 Transcriptional regulatory protein, C terminal IX88_RS17290 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS17290 PF00672 HAMP domain IX88_RS17290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS17300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS17300 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS17300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS17300 PF12418 IX88_RS17300 IX88_RS17300 PF12806 IX88_RS17300 IX88_RS17305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS17305 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS17305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS17305 PF12418 IX88_RS17305 IX88_RS17305 PF12806 IX88_RS17305 IX88_RS17310 PF06146 IX88_RS17310 IX88_RS17315 PF11776 Domain of unknown function (DUF3315) IX88_RS17325 PF13091 PLD-like domain IX88_RS17330 PF00593 TonB dependent receptor IX88_RS17330 PF07715 TonB-dependent Receptor Plug Domain IX88_RS17335 PF13803 IX88_RS17335 IX88_RS17340 PF00152 tRNA synthetases class II (D, K and N) IX88_RS17340 PF01336 OB-fold nucleic acid binding domain IX88_RS17340 PF02938 GAD domain IX88_RS17350 PF00534 Glycosyl transferases group 1 IX88_RS17355 PF00535 Glycosyl transferase family 2 IX88_RS17360 PF00534 Glycosyl transferases group 1 IX88_RS17360 PF13439 Glycosyltransferase Family 4 IX88_RS17365 PF13472 GDSL-like Lipase/Acylhydrolase family IX88_RS17375 PF06258 IX88_RS17375 IX88_RS17380 PF00534 Glycosyl transferases group 1 IX88_RS17380 PF13439 Glycosyltransferase Family 4 IX88_RS17385 PF01522 Polysaccharide deacetylase IX88_RS17390 PF06258 IX88_RS17390 IX88_RS17395 PF01063 Aminotransferase class IV IX88_RS17400 PF03710 Glutamate-ammonia ligase adenylyltransferase IX88_RS17400 PF08335 GlnD PII-uridylyltransferase IX88_RS17405 PF00512 His Kinase A (phospho-acceptor) domain IX88_RS17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX88_RS17415 PF15956 IX88_RS17415 IX88_RS17425 PF02547 Queuosine biosynthesis protein IX88_RS17435 PF04011 LemA family IX88_RS17440 PF01702 Queuine tRNA-ribosyltransferase IX88_RS17445 PF02699 Preprotein translocase subunit IX88_RS17450 PF02355 Protein export membrane protein IX88_RS17450 PF07549 SecD/SecF GG Motif IX88_RS17450 PF13721 SecD export protein N-terminal TM region IX88_RS17455 PF02355 Protein export membrane protein IX88_RS17455 PF07549 SecD/SecF GG Motif IX88_RS17460 PF02441 Flavoprotein IX88_RS17460 PF04127 DNA / pantothenate metabolism flavoprotein IX88_RS17465 PF04002 RadC-like JAB domain IX88_RS17470 PF01062 IX88_RS17470 IX88_RS17475 PF02811 PHP domain IX88_RS17480 PF04279 IX88_RS17480 IX88_RS17485 PF03795 YCII-related domain IX88_RS17495 PF01266 FAD dependent oxidoreductase IX88_RS17495 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IX88_RS17500 PF00581 Rhodanese-like domain IX88_RS17505 PF04461 Protein of unknown function (DUF520) IX88_RS17510 PF14539 Domain of unknown function (DUF4442) IX88_RS17515 PF03061 Thioesterase superfamily IX88_RS17520 PF00085 Thioredoxin IX88_RS17525 PF12146 Putative lysophospholipase IX88_RS17530 PF04273 Putative phosphatase (DUF442) IX88_RS17540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX88_RS17540 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX88_RS17570 PF13689 IX88_RS17570 IX88_RS17575 PF00990 GGDEF domain IX88_RS17575 PF17152 IX88_RS17575 IX88_RS17580 PF00691 OmpA family IX88_RS17585 PF00149 Calcineurin-like phosphoesterase IX88_RS17590 PF13091 PLD-like domain IX88_RS17595 PF01553 Acyltransferase IX88_RS17600 PF01926 50S ribosome-binding GTPase IX88_RS17600 PF13167 IX88_RS17600 IX88_RS17600 PF16360 IX88_RS17600 IX88_RS17610 PF04172 IX88_RS17610 IX88_RS17615 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) IX88_RS17620 PF00149 Calcineurin-like phosphoesterase IX88_RS17625 PF00398 Ribosomal RNA adenine dimethylase IX88_RS17630 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IX88_RS17635 PF00572 Ribosomal protein L13 IX88_RS17640 PF00380 Ribosomal protein S9/S16 IX88_RS17645 PF02798 Glutathione S-transferase, N-terminal domain IX88_RS17650 PF04386 Stringent starvation protein B IX88_RS17660 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain IX88_RS17660 PF00364 Biotin-requiring enzyme IX88_RS17660 PF02785 Biotin carboxylase C-terminal domain IX88_RS17660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX88_RS17665 PF00378 Enoyl-CoA hydratase/isomerase family IX88_RS17670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS17670 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS17670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS17675 PF01039 Carboxyl transferase domain IX88_RS17680 PF13561 Enoyl-(Acyl carrier protein) reductase IX88_RS17685 PF07287 IX88_RS17685 IX88_RS17690 PF00440 Bacterial regulatory proteins, tetR family IX88_RS17695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS17695 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS17695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS17700 PF14066 IX88_RS17700 IX88_RS17705 PF04828 Glutathione-dependent formaldehyde-activating enzyme IX88_RS17740 PF01066 CDP-alcohol phosphatidyltransferase IX88_RS17745 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ IX88_RS17750 PF13640 2OG-Fe(II) oxygenase superfamily IX88_RS17760 PF10982 Protein of unknown function (DUF2789) IX88_RS17765 PF00056 lactate/malate dehydrogenase, NAD binding domain IX88_RS17765 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IX88_RS17770 PF00445 Ribonuclease T2 family IX88_RS17775 PF01464 Transglycosylase SLT domain IX88_RS17780 PF00919 Uncharacterized protein family UPF0004 IX88_RS17780 PF01938 TRAM domain IX88_RS17780 PF04055 Radical SAM superfamily IX88_RS17785 PF02562 PhoH-like protein IX88_RS17790 PF02130 Uncharacterized protein family UPF0054 IX88_RS17795 PF03544 Gram-negative bacterial TonB protein C-terminal IX88_RS17805 PF11306 Protein of unknown function (DUF3108) IX88_RS17815 PF03358 NADPH-dependent FMN reductase IX88_RS17820 PF03631 IX88_RS17820 IX88_RS17825 PF00892 EamA-like transporter family IX88_RS17830 PF02311 AraC-like ligand binding domain IX88_RS17830 PF12833 Helix-turn-helix domain IX88_RS17835 PF01557 Fumarylacetoacetate (FAA) hydrolase family IX88_RS17845 PF00881 Nitroreductase family IX88_RS17860 PF12710 haloacid dehalogenase-like hydrolase IX88_RS17880 PF00575 S1 RNA binding domain IX88_RS17880 PF00773 RNB domain IX88_RS17880 PF08206 Ribonuclease B OB domain IX88_RS17885 PF01432 Peptidase family M3 IX88_RS17890 PF09526 IX88_RS17890 IX88_RS17900 PF06808 IX88_RS17900 IX88_RS17905 PF01694 Rhomboid family IX88_RS17920 PF03937 Flavinator of succinate dehydrogenase IX88_RS17925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX88_RS17925 PF02770 Acyl-CoA dehydrogenase, middle domain IX88_RS17925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX88_RS17930 PF00743 Flavin-binding monooxygenase-like IX88_RS17930 PF13450 NAD(P)-binding Rossmann-like domain IX88_RS17935 PF01196 Ribosomal protein L17 IX88_RS17940 PF01000 RNA polymerase Rpb3/RpoA insert domain IX88_RS17940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IX88_RS17940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IX88_RS17945 PF00163 Ribosomal protein S4/S9 N-terminal domain IX88_RS17945 PF01479 S4 domain IX88_RS17950 PF00411 Ribosomal protein S11 IX88_RS17955 PF00416 Ribosomal protein S13/S18 IX88_RS17960 PF00444 Ribosomal protein L36 IX88_RS17965 PF00344 SecY translocase IX88_RS17970 PF00828 Ribosomal protein L18e/L15 IX88_RS17975 PF00327 Ribosomal protein L30p/L7e IX88_RS17990 PF00347 Ribosomal protein L6