locus-tag class description NU955_RS00005 PF00308 Bacterial dnaA protein NU955_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NU955_RS00005 PF11638 DnaA N-terminal domain NU955_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NU955_RS00010 PF02767 DNA polymerase III beta subunit, central domain NU955_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NU955_RS00015 PF02463 RecF/RecN/SMC N terminal domain NU955_RS00020 PF01751 Toprim domain NU955_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus NU955_RS00020 PF00204 DNA gyrase B NU955_RS00020 PF18053 DNA gyrase B subunit insert domain NU955_RS00030 PF09335 SNARE associated Golgi protein NU955_RS00035 PF00005 ABC transporter NU955_RS00035 PF12848 ABC transporter NU955_RS00055 PF01521 Iron-sulphur cluster biosynthesis NU955_RS00060 PF00561 alpha/beta hydrolase fold NU955_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase NU955_RS00070 PF00579 tRNA synthetases class I (W and Y) NU955_RS00110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NU955_RS00115 PF01252 Signal peptidase (SPase) II NU955_RS00120 PF08264 Anticodon-binding domain of tRNA NU955_RS00120 PF00133 tRNA synthetases class I (I, L, M and V) NU955_RS00120 PF06827 Zinc finger found in FPG and IleRS NU955_RS00125 PF06574 FAD synthetase NU955_RS00125 PF01687 Riboflavin kinase NU955_RS00135 PF01048 Phosphorylase superfamily NU955_RS00140 PF08362 YcdC-like protein, C-terminal region NU955_RS00140 PF00440 Bacterial regulatory proteins, tetR family NU955_RS00145 PF00005 ABC transporter NU955_RS00150 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS00155 PF00296 Luciferase-like monooxygenase NU955_RS00160 PF09084 NMT1/THI5 like NU955_RS00165 PF09084 NMT1/THI5 like NU955_RS00170 PF00696 Amino acid kinase family NU955_RS00170 PF00583 Acetyltransferase (GNAT) family NU955_RS00185 PF00106 short chain dehydrogenase NU955_RS00190 PF13419 Haloacid dehalogenase-like hydrolase NU955_RS00200 PF01323 DSBA-like thioredoxin domain NU955_RS00205 PF08360 QacR-like protein, C-terminal region NU955_RS00205 PF00440 Bacterial regulatory proteins, tetR family NU955_RS00210 PF00440 Bacterial regulatory proteins, tetR family NU955_RS00215 PF00175 Oxidoreductase NAD-binding domain NU955_RS00220 PF00487 Fatty acid desaturase NU955_RS00225 PF01138 3' exoribonuclease family, domain 1 NU955_RS00225 PF03725 3' exoribonuclease family, domain 2 NU955_RS00235 PF04185 Phosphoesterase family NU955_RS00235 PF05506 Domain of unknown function (DUF756) NU955_RS00245 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NU955_RS00245 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NU955_RS00250 PF01510 N-acetylmuramoyl-L-alanine amidase NU955_RS00255 PF03023 Lipid II flippase MurJ NU955_RS00260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NU955_RS00260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NU955_RS00265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NU955_RS00265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NU955_RS00270 PF13614 AAA domain NU955_RS00270 PF13807 G-rich domain on putative tyrosine kinase NU955_RS00270 PF02706 Chain length determinant protein NU955_RS00275 PF01451 Low molecular weight phosphotyrosine protein phosphatase NU955_RS00280 PF02563 Polysaccharide biosynthesis/export protein NU955_RS00280 PF10531 SLBB domain NU955_RS00280 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NU955_RS00285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NU955_RS00285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NU955_RS00285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NU955_RS00290 PF16363 GDP-mannose 4,6 dehydratase NU955_RS00295 PF04321 RmlD substrate binding domain NU955_RS00300 PF00483 Nucleotidyl transferase NU955_RS00305 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NU955_RS00320 PF00534 Glycosyl transferases group 1 NU955_RS00320 PF13439 Glycosyltransferase Family 4 NU955_RS00325 PF00535 Glycosyl transferase family 2 NU955_RS00330 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS00335 PF01370 NAD dependent epimerase/dehydratase family NU955_RS00345 PF02397 Bacterial sugar transferase NU955_RS00350 PF00483 Nucleotidyl transferase NU955_RS00355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NU955_RS00355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NU955_RS00355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NU955_RS00360 PF00342 Phosphoglucose isomerase NU955_RS00370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NU955_RS00370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NU955_RS00370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NU955_RS00370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NU955_RS00375 PF02652 L-lactate permease NU955_RS00380 PF07729 FCD domain NU955_RS00380 PF00392 Bacterial regulatory proteins, gntR family NU955_RS00385 PF01070 FMN-dependent dehydrogenase NU955_RS00390 PF01565 FAD binding domain NU955_RS00390 PF09330 D-lactate dehydrogenase, membrane binding NU955_RS00395 PF00155 Aminotransferase class I and II NU955_RS00400 PF07729 FCD domain NU955_RS00400 PF00392 Bacterial regulatory proteins, gntR family NU955_RS00410 PF00285 Citrate synthase, C-terminal domain NU955_RS00415 PF00694 Aconitase C-terminal domain NU955_RS00415 PF00330 Aconitase family (aconitate hydratase) NU955_RS00445 PF00849 RNA pseudouridylate synthase NU955_RS00460 PF00593 TonB dependent receptor NU955_RS00460 PF07715 TonB-dependent Receptor Plug Domain NU955_RS00470 PF01037 Lrp/AsnC ligand binding domain NU955_RS00475 PF01266 FAD dependent oxidoreductase NU955_RS00480 PF01168 Alanine racemase, N-terminal domain NU955_RS00480 PF00842 Alanine racemase, C-terminal domain NU955_RS00485 PF01042 Endoribonuclease L-PSP NU955_RS00490 PF00324 Amino acid permease NU955_RS00495 PF00324 Amino acid permease NU955_RS00505 PF00171 Aldehyde dehydrogenase family NU955_RS00510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NU955_RS00510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NU955_RS00515 PF00501 AMP-binding enzyme NU955_RS00515 PF13193 AMP-binding enzyme C-terminal domain NU955_RS00520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS00520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS00520 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS00525 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS00530 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS00535 PF07690 Major Facilitator Superfamily NU955_RS00535 PF00083 Sugar (and other) transporter NU955_RS00540 PF00765 Autoinducer synthase NU955_RS00550 PF03472 Autoinducer binding domain NU955_RS00550 PF00196 Bacterial regulatory proteins, luxR family NU955_RS00555 PF00501 AMP-binding enzyme NU955_RS00560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS00560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS00560 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS00565 PF16197 Ketoacyl-synthetase C-terminal extension NU955_RS00565 PF14765 Polyketide synthase dehydratase NU955_RS00565 PF08242 Methyltransferase domain NU955_RS00565 PF00550 Phosphopantetheine attachment site NU955_RS00565 PF00975 Thioesterase domain NU955_RS00565 PF02801 Beta-ketoacyl synthase, C-terminal domain NU955_RS00565 PF00109 Beta-ketoacyl synthase, N-terminal domain NU955_RS00570 PF00975 Thioesterase domain NU955_RS00570 PF00550 Phosphopantetheine attachment site NU955_RS00570 PF00668 Condensation domain NU955_RS00570 PF13193 AMP-binding enzyme C-terminal domain NU955_RS00570 PF00501 AMP-binding enzyme NU955_RS00585 PF12697 Alpha/beta hydrolase family NU955_RS00590 PF01648 4'-phosphopantetheinyl transferase superfamily NU955_RS00605 PF01722 BolA-like protein NU955_RS00615 PF13614 AAA domain NU955_RS00630 PF09335 SNARE associated Golgi protein NU955_RS00635 PF07681 DoxX NU955_RS00640 PF04286 Protein of unknown function (DUF445) NU955_RS00645 PF02540 NAD synthase NU955_RS00645 PF00958 GMP synthase C terminal domain NU955_RS00645 PF00117 Glutamine amidotransferase class-I NU955_RS00650 PF01909 Nucleotidyltransferase domain NU955_RS00650 PF13427 Domain of unknown function (DUF4111) NU955_RS00655 PF03551 Transcriptional regulator PadR-like family NU955_RS00665 PF05726 Pirin C-terminal cupin domain NU955_RS00665 PF02678 Pirin NU955_RS00685 PF00750 tRNA synthetases class I (R) NU955_RS00685 PF03485 Arginyl tRNA synthetase N terminal domain NU955_RS00685 PF05746 DALR anticodon binding domain NU955_RS00690 PF00390 Malic enzyme, N-terminal domain NU955_RS00690 PF03949 Malic enzyme, NAD binding domain NU955_RS00695 PF04261 Dyp-type peroxidase family NU955_RS00700 PF01810 LysE type translocator NU955_RS00705 PF00950 ABC 3 transport family NU955_RS00710 PF00005 ABC transporter NU955_RS00730 PF00119 ATP synthase A chain NU955_RS00735 PF00137 ATP synthase subunit C NU955_RS00740 PF00430 ATP synthase B/B' CF(0) NU955_RS00745 PF00213 ATP synthase delta (OSCP) subunit NU955_RS00750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NU955_RS00750 PF00306 ATP synthase alpha/beta chain, C terminal domain NU955_RS00750 PF02874 ATP synthase alpha/beta family, beta-barrel domain NU955_RS00755 PF00231 ATP synthase NU955_RS00760 PF02874 ATP synthase alpha/beta family, beta-barrel domain NU955_RS00760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NU955_RS00765 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NU955_RS00775 PF00255 Glutathione peroxidase NU955_RS00785 PF07690 Major Facilitator Superfamily NU955_RS00790 PF00440 Bacterial regulatory proteins, tetR family NU955_RS00795 PF00892 EamA-like transporter family NU955_RS00800 PF01300 Telomere recombination NU955_RS00805 PF02481 DNA recombination-mediator protein A NU955_RS00805 PF17782 DprA winged helix domain NU955_RS00815 PF01327 Polypeptide deformylase NU955_RS00875 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS00885 PF03358 NADPH-dependent FMN reductase NU955_RS00905 PF11842 Domain of unknown function (DUF3362) NU955_RS00905 PF04055 Radical SAM superfamily NU955_RS00905 PF08497 Radical SAM N-terminal NU955_RS00925 PF00817 impB/mucB/samB family NU955_RS00925 PF11799 impB/mucB/samB family C-terminal domain NU955_RS00925 PF11798 IMS family HHH motif NU955_RS00935 PF07690 Major Facilitator Superfamily NU955_RS00940 PF03641 Possible lysine decarboxylase NU955_RS00945 PF03471 Transporter associated domain NU955_RS00945 PF03741 Integral membrane protein TerC family NU955_RS00950 PF02810 SEC-C motif NU955_RS00955 PF03458 UPF0126 domain NU955_RS00960 PF07690 Major Facilitator Superfamily NU955_RS00965 PF03989 DNA gyrase C-terminal domain, beta-propeller NU955_RS00965 PF00521 DNA gyrase/topoisomerase IV, subunit A NU955_RS00970 PF00501 AMP-binding enzyme NU955_RS00970 PF13193 AMP-binding enzyme C-terminal domain NU955_RS00985 PF00719 Inorganic pyrophosphatase NU955_RS00990 PF03573 outer membrane porin, OprD family NU955_RS01005 PF00701 Dihydrodipicolinate synthetase family NU955_RS01030 PF00665 Integrase core domain NU955_RS01060 PF00582 Universal stress protein family NU955_RS01065 PF00916 Sulfate permease family NU955_RS01065 PF01740 STAS domain NU955_RS01085 PF00543 Nitrogen regulatory protein P-II NU955_RS01090 PF00909 Ammonium Transporter Family NU955_RS01095 PF03477 ATP cone domain NU955_RS01100 PF01872 RibD C-terminal domain NU955_RS01100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NU955_RS01110 PF00677 Lumazine binding domain NU955_RS01130 PF02789 Cytosol aminopeptidase family, N-terminal domain NU955_RS01130 PF00883 Cytosol aminopeptidase family, catalytic domain NU955_RS01140 PF03739 Lipopolysaccharide export system permease LptF/LptG NU955_RS01145 PF01676 Metalloenzyme superfamily NU955_RS01145 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NU955_RS01150 PF03572 Peptidase family S41 NU955_RS01150 PF00595 PDZ domain NU955_RS01155 PF00158 Sigma-54 interaction domain NU955_RS01155 PF00072 Response regulator receiver domain NU955_RS01155 PF02954 Bacterial regulatory protein, Fis family NU955_RS01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS01160 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS01165 PF00072 Response regulator receiver domain NU955_RS01165 PF00196 Bacterial regulatory proteins, luxR family NU955_RS01170 PF00768 D-alanyl-D-alanine carboxypeptidase NU955_RS01175 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS01180 PF01842 ACT domain NU955_RS01180 PF00742 Homoserine dehydrogenase NU955_RS01180 PF03447 Homoserine dehydrogenase, NAD binding domain NU955_RS01185 PF10411 Disulfide bond isomerase protein N-terminus NU955_RS01185 PF13098 Thioredoxin-like domain NU955_RS01190 PF02899 Phage integrase, N-terminal SAM-like domain NU955_RS01190 PF00589 Phage integrase family NU955_RS01200 PF07664 Ferrous iron transport protein B C terminus NU955_RS01200 PF07670 Nucleoside recognition NU955_RS01200 PF02421 Ferrous iron transport protein B NU955_RS01210 PF08245 Mur ligase middle domain NU955_RS01210 PF02875 Mur ligase family, glutamate ligase domain NU955_RS01215 PF01098 Cell cycle protein NU955_RS01220 PF00749 tRNA synthetases class I (E and Q), catalytic domain NU955_RS01225 PF01258 Prokaryotic dksA/traR C4-type zinc finger NU955_RS01230 PF00149 Calcineurin-like phosphoesterase NU955_RS01235 PF00293 NUDIX domain NU955_RS01240 PF13667 ThiC-associated domain NU955_RS01240 PF01964 Radical SAM ThiC family NU955_RS01255 PF00892 EamA-like transporter family NU955_RS01260 PF02321 Outer membrane efflux protein NU955_RS01265 PF01895 PhoU domain NU955_RS01270 PF04362 Bacterial Fe(2+) trafficking NU955_RS01275 PF00206 Lyase NU955_RS01275 PF14698 Argininosuccinate lyase C-terminal NU955_RS01280 PF07694 5TMR of 5TMR-LYT NU955_RS01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS01280 PF06580 Histidine kinase NU955_RS01285 PF04397 LytTr DNA-binding domain NU955_RS01285 PF00072 Response regulator receiver domain NU955_RS01290 PF03900 Porphobilinogen deaminase, C-terminal domain NU955_RS01290 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NU955_RS01315 PF00816 H-NS histone family NU955_RS01330 PF03958 Bacterial type II/III secretion system short domain NU955_RS01330 PF00263 Bacterial type II and III secretion system protein NU955_RS01335 PF12401 Protein of unknown function (DUF2662) NU955_RS01335 PF00498 FHA domain NU955_RS01340 PF13419 Haloacid dehalogenase-like hydrolase NU955_RS01345 PF04715 Anthranilate synthase component I, N terminal region NU955_RS01345 PF00425 chorismate binding enzyme NU955_RS01370 PF03143 Elongation factor Tu C-terminal domain NU955_RS01370 PF00009 Elongation factor Tu GTP binding domain NU955_RS01370 PF03144 Elongation factor Tu domain 2 NU955_RS01380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NU955_RS01385 PF02357 Transcription termination factor nusG NU955_RS01385 PF00467 KOW motif NU955_RS01390 PF00298 Ribosomal protein L11, RNA binding domain NU955_RS01390 PF03946 Ribosomal protein L11, N-terminal domain NU955_RS01395 PF00687 Ribosomal protein L1p/L10e family NU955_RS01400 PF00466 Ribosomal protein L10 NU955_RS01405 PF00542 Ribosomal protein L7/L12 C-terminal domain NU955_RS01405 PF16320 Ribosomal protein L7/L12 dimerisation domain NU955_RS01410 PF04563 RNA polymerase beta subunit NU955_RS01410 PF04561 RNA polymerase Rpb2, domain 2 NU955_RS01410 PF04565 RNA polymerase Rpb2, domain 3 NU955_RS01410 PF10385 RNA polymerase beta subunit external 1 domain NU955_RS01410 PF00562 RNA polymerase Rpb2, domain 6 NU955_RS01410 PF04560 RNA polymerase Rpb2, domain 7 NU955_RS01415 PF04997 RNA polymerase Rpb1, domain 1 NU955_RS01415 PF00623 RNA polymerase Rpb1, domain 2 NU955_RS01415 PF04983 RNA polymerase Rpb1, domain 3 NU955_RS01415 PF05000 RNA polymerase Rpb1, domain 4 NU955_RS01415 PF04998 RNA polymerase Rpb1, domain 5 NU955_RS01435 PF00561 alpha/beta hydrolase fold NU955_RS01440 PF03553 Na+/H+ antiporter family NU955_RS01440 PF13726 Na+-H+ antiporter family NU955_RS01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS01455 PF00183 Hsp90 protein NU955_RS01470 PF01323 DSBA-like thioredoxin domain NU955_RS01480 PF00376 MerR family regulatory protein NU955_RS01480 PF09278 MerR, DNA binding NU955_RS01500 PF02803 Thiolase, C-terminal domain NU955_RS01500 PF00108 Thiolase, N-terminal domain NU955_RS01505 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS01505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NU955_RS01505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NU955_RS01530 PF08459 UvrC Helix-hairpin-helix N-terminal NU955_RS01530 PF01541 GIY-YIG catalytic domain NU955_RS01530 PF02151 UvrB/uvrC motif NU955_RS01540 PF01066 CDP-alcohol phosphatidyltransferase NU955_RS01570 PF13533 Biotin-lipoyl like NU955_RS01575 PF03652 Holliday junction resolvase NU955_RS01580 PF02622 Uncharacterized ACR, COG1678 NU955_RS01585 PF02463 RecF/RecN/SMC N terminal domain NU955_RS01595 PF06865 Pyrimidine/purine nucleoside phosphorylase NU955_RS01600 PF08032 RNA 2'-O ribose methyltransferase substrate binding NU955_RS01600 PF00588 SpoU rRNA Methylase family NU955_RS01610 PF01121 Dephospho-CoA kinase NU955_RS01615 PF06750 Bacterial Peptidase A24 N-terminal domain NU955_RS01615 PF01478 Type IV leader peptidase family NU955_RS01620 PF00482 Type II secretion system (T2SS), protein F NU955_RS01625 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NU955_RS01625 PF00437 Type II/IV secretion system protein NU955_RS01630 PF00121 Triosephosphate isomerase NU955_RS01635 PF03840 Preprotein translocase SecG subunit NU955_RS01655 PF17384 RimP C-terminal SH3 domain NU955_RS01655 PF02576 RimP N-terminal domain NU955_RS01660 PF00575 S1 RNA binding domain NU955_RS01660 PF13184 NusA-like KH domain NU955_RS01660 PF08529 NusA N-terminal domain NU955_RS01665 PF00009 Elongation factor Tu GTP binding domain NU955_RS01665 PF11987 Translation-initiation factor 2 NU955_RS01665 PF08364 Bacterial translation initiation factor IF-2 associated region NU955_RS01665 PF04760 Translation initiation factor IF-2, N-terminal region NU955_RS01670 PF02033 Ribosome-binding factor A NU955_RS01675 PF03334 Na+/H+ antiporter subunit NU955_RS01680 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NU955_RS01685 PF01899 Na+/H+ ion antiporter subunit NU955_RS01690 PF00361 Proton-conducting membrane transporter NU955_RS01695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NU955_RS01700 PF13244 Domain of unknown function (DUF4040) NU955_RS01700 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NU955_RS01700 PF00361 Proton-conducting membrane transporter NU955_RS01700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NU955_RS01715 PF01502 Phosphoribosyl-AMP cyclohydrolase NU955_RS01725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NU955_RS01730 PF01494 FAD binding domain NU955_RS01735 PF03109 ABC1 family NU955_RS01745 PF01209 ubiE/COQ5 methyltransferase family NU955_RS01755 PF03976 Polyphosphate kinase 2 (PPK2) NU955_RS01765 PF17946 RecC C-terminal domain NU955_RS01770 PF12705 PD-(D/E)XK nuclease superfamily NU955_RS01770 PF00580 UvrD/REP helicase N-terminal domain NU955_RS01770 PF13361 UvrD-like helicase C-terminal domain NU955_RS01775 PF13538 UvrD-like helicase C-terminal domain NU955_RS01780 PF00144 Beta-lactamase NU955_RS01785 PF00312 Ribosomal protein S15 NU955_RS01790 PF00575 S1 RNA binding domain NU955_RS01790 PF03725 3' exoribonuclease family, domain 2 NU955_RS01790 PF01138 3' exoribonuclease family, domain 1 NU955_RS01790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NU955_RS01790 PF00013 KH domain NU955_RS01795 PF01544 CorA-like Mg2+ transporter protein NU955_RS01805 PF01556 DnaJ C terminal domain NU955_RS01805 PF00226 DnaJ domain NU955_RS01815 PF01430 Hsp33 protein NU955_RS01820 PF02254 TrkA-N domain NU955_RS01820 PF00999 Sodium/hydrogen exchanger family NU955_RS01825 PF00271 Helicase conserved C-terminal domain NU955_RS01825 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NU955_RS01825 PF00270 DEAD/DEAH box helicase NU955_RS01825 PF17764 3′ DNA-binding domain (3′BD) NU955_RS01825 PF18074 Primosomal protein N C-terminal domain NU955_RS01830 PF00482 Type II secretion system (T2SS), protein F NU955_RS01835 PF07963 Prokaryotic N-terminal methylation motif NU955_RS01835 PF08334 Type II secretion system (T2SS), protein G NU955_RS01845 PF01588 Putative tRNA binding domain NU955_RS01850 PF00795 Carbon-nitrogen hydrolase NU955_RS01855 PF00571 CBS domain NU955_RS01855 PF03471 Transporter associated domain NU955_RS01860 PF01206 Sulfurtransferase TusA NU955_RS01880 PF01177 Asp/Glu/Hydantoin racemase NU955_RS01890 PF00762 Ferrochelatase NU955_RS01895 PF00753 Metallo-beta-lactamase superfamily NU955_RS01900 PF03884 DNA gyrase inhibitor YacG NU955_RS01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS01910 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NU955_RS01910 PF13247 4Fe-4S dicluster domain NU955_RS01920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NU955_RS01930 PF01197 Ribosomal protein L31 NU955_RS01935 PF03109 ABC1 family NU955_RS01940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS01940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS01945 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS01945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS01945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS01950 PF01554 MatE NU955_RS01960 PF06969 HemN C-terminal domain NU955_RS01960 PF04055 Radical SAM superfamily NU955_RS01970 PF03466 LysR substrate binding domain NU955_RS01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS01985 PF13193 AMP-binding enzyme C-terminal domain NU955_RS01985 PF00501 AMP-binding enzyme NU955_RS01990 PF12111 Polyribonucleotide phosphorylase C terminal NU955_RS01990 PF00575 S1 RNA binding domain NU955_RS01990 PF10150 Ribonuclease E/G family NU955_RS01995 PF00849 RNA pseudouridylate synthase NU955_RS01995 PF01479 S4 domain NU955_RS02000 PF13419 Haloacid dehalogenase-like hydrolase NU955_RS02005 PF08279 HTH domain NU955_RS02005 PF13280 WYL domain NU955_RS02010 PF02798 Glutathione S-transferase, N-terminal domain NU955_RS02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS02020 PF03466 LysR substrate binding domain NU955_RS02025 PF12706 Beta-lactamase superfamily domain NU955_RS02030 PF00141 Peroxidase NU955_RS02035 PF05524 PEP-utilising enzyme, N-terminal NU955_RS02035 PF00391 PEP-utilising enzyme, mobile domain NU955_RS02035 PF02896 PEP-utilising enzyme, TIM barrel domain NU955_RS02035 PF01590 GAF domain NU955_RS02040 PF00293 NUDIX domain NU955_RS02060 PF03466 LysR substrate binding domain NU955_RS02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS02070 PF00330 Aconitase family (aconitate hydratase) NU955_RS02075 PF00694 Aconitase C-terminal domain NU955_RS02085 PF00180 Isocitrate/isopropylmalate dehydrogenase NU955_RS02100 PF01176 Translation initiation factor 1A / IF-1 NU955_RS02110 PF01416 tRNA pseudouridine synthase NU955_RS02130 PF02774 Semialdehyde dehydrogenase, dimerisation domain NU955_RS02130 PF01118 Semialdehyde dehydrogenase, NAD binding domain NU955_RS02140 PF00375 Sodium:dicarboxylate symporter family NU955_RS02150 PF03279 Bacterial lipid A biosynthesis acyltransferase NU955_RS02155 PF01810 LysE type translocator NU955_RS02165 PF12848 ABC transporter NU955_RS02165 PF00005 ABC transporter NU955_RS02165 PF16326 ABC transporter C-terminal domain NU955_RS02170 PF04102 SlyX NU955_RS02175 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS02175 PF00107 Zinc-binding dehydrogenase NU955_RS02180 PF01638 HxlR-like helix-turn-helix NU955_RS02190 PF01131 DNA topoisomerase NU955_RS02190 PF08272 Topoisomerase I zinc-ribbon-like NU955_RS02190 PF01751 Toprim domain NU955_RS02190 PF01396 Topoisomerase DNA binding C4 zinc finger NU955_RS02205 PF13361 UvrD-like helicase C-terminal domain NU955_RS02205 PF00580 UvrD/REP helicase N-terminal domain NU955_RS02210 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NU955_RS02230 PF00999 Sodium/hydrogen exchanger family NU955_RS02230 PF02254 TrkA-N domain NU955_RS02235 PF00471 Ribosomal protein L33 NU955_RS02240 PF00830 Ribosomal L28 family NU955_RS02245 PF00171 Aldehyde dehydrogenase family NU955_RS02255 PF01842 ACT domain NU955_RS02255 PF00551 Formyl transferase NU955_RS02265 PF01618 MotA/TolQ/ExbB proton channel family NU955_RS02275 PF01625 Peptide methionine sulfoxide reductase NU955_RS02285 PF00186 Dihydrofolate reductase NU955_RS02290 PF00303 Thymidylate synthase NU955_RS02305 PF01790 Prolipoprotein diacylglyceryl transferase NU955_RS02325 PF00902 Sec-independent protein translocase protein (TatC) NU955_RS02330 PF02416 mttA/Hcf106 family NU955_RS02335 PF02416 mttA/Hcf106 family NU955_RS02345 PF01725 Ham1 family NU955_RS02355 PF07021 Methionine biosynthesis protein MetW NU955_RS02355 PF00561 alpha/beta hydrolase fold NU955_RS02360 PF00561 alpha/beta hydrolase fold NU955_RS02365 PF00682 HMGL-like NU955_RS02365 PF08502 LeuA allosteric (dimerisation) domain NU955_RS02370 PF18331 PKHD-type hydroxylase C-terminal domain NU955_RS02370 PF13640 2OG-Fe(II) oxygenase superfamily NU955_RS02375 PF07715 TonB-dependent Receptor Plug Domain NU955_RS02375 PF00593 TonB dependent receptor NU955_RS02380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NU955_RS02380 PF05698 Bacterial trigger factor protein (TF) C-terminus NU955_RS02380 PF05697 Bacterial trigger factor protein (TF) NU955_RS02385 PF00574 Clp protease NU955_RS02390 PF10431 C-terminal, D2-small domain, of ClpB protein NU955_RS02390 PF06689 ClpX C4-type zinc finger NU955_RS02390 PF07724 AAA domain (Cdc48 subfamily) NU955_RS02405 PF05681 Fumarate hydratase (Fumerase) NU955_RS02405 PF05683 Fumarase C-terminus NU955_RS02410 PF07085 DRTGG domain NU955_RS02410 PF01515 Phosphate acetyl/butaryl transferase NU955_RS02415 PF00871 Acetokinase family NU955_RS02420 PF00920 Dehydratase family NU955_RS02425 PF01081 KDPG and KHG aldolase NU955_RS02430 PF02447 GntP family permease NU955_RS02435 PF01202 Shikimate kinase NU955_RS02440 PF00171 Aldehyde dehydrogenase family NU955_RS02445 PF00171 Aldehyde dehydrogenase family NU955_RS02450 PF00561 alpha/beta hydrolase fold NU955_RS02460 PF00933 Glycosyl hydrolase family 3 N terminal domain NU955_RS02465 PF11818 C-terminal domain of tail specific protease (DUF3340) NU955_RS02465 PF00595 PDZ domain NU955_RS02465 PF03572 Peptidase family S41 NU955_RS02465 PF17804 Tail specific protease N-terminal domain NU955_RS02470 PF13439 Glycosyltransferase Family 4 NU955_RS02470 PF00534 Glycosyl transferases group 1 NU955_RS02475 PF01569 PAP2 superfamily NU955_RS02480 PF04384 Iron-sulphur cluster assembly NU955_RS02485 PF00334 Nucleoside diphosphate kinase NU955_RS02490 PF04055 Radical SAM superfamily NU955_RS02500 PF13464 Domain of unknown function (DUF4115) NU955_RS02505 PF04551 GcpE protein NU955_RS02510 PF03129 Anticodon binding domain NU955_RS02510 PF13393 Histidyl-tRNA synthetase NU955_RS02520 PF13360 PQQ-like domain NU955_RS02520 PF01011 PQQ enzyme repeat NU955_RS02525 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NU955_RS02525 PF01926 50S ribosome-binding GTPase NU955_RS02535 PF02556 Preprotein translocase subunit SecB NU955_RS02540 PF00462 Glutaredoxin NU955_RS02550 PF03193 RsgA GTPase NU955_RS02555 PF00929 Exonuclease NU955_RS02570 PF02321 Outer membrane efflux protein NU955_RS02575 PF02687 FtsX-like permease family NU955_RS02575 PF12704 MacB-like periplasmic core domain NU955_RS02575 PF00005 ABC transporter NU955_RS02580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS02595 PF08264 Anticodon-binding domain of tRNA NU955_RS02595 PF00133 tRNA synthetases class I (I, L, M and V) NU955_RS02595 PF13603 Leucyl-tRNA synthetase, Domain 2 NU955_RS02595 PF09334 tRNA synthetases class I (M) NU955_RS02605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NU955_RS02605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NU955_RS02605 PF00205 Thiamine pyrophosphate enzyme, central domain NU955_RS02610 PF10369 Small subunit of acetolactate synthase NU955_RS02615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NU955_RS02615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NU955_RS02620 PF00563 EAL domain NU955_RS02620 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS02620 PF03707 Bacterial signalling protein N terminal repeat NU955_RS02640 PF00009 Elongation factor Tu GTP binding domain NU955_RS02640 PF03144 Elongation factor Tu domain 2 NU955_RS02640 PF16658 Class II release factor RF3, C-terminal domain NU955_RS02655 PF01026 TatD related DNase NU955_RS02660 PF00694 Aconitase C-terminal domain NU955_RS02660 PF00330 Aconitase family (aconitate hydratase) NU955_RS02670 PF00899 ThiF family NU955_RS02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS02680 PF03466 LysR substrate binding domain NU955_RS02690 PF01207 Dihydrouridine synthase (Dus) NU955_RS02695 PF00589 Phage integrase family NU955_RS02725 PF04945 YHS domain NU955_RS02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS02730 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS02730 PF00672 HAMP domain NU955_RS02735 PF00072 Response regulator receiver domain NU955_RS02735 PF00486 Transcriptional regulatory protein, C terminal NU955_RS02745 PF00394 Multicopper oxidase NU955_RS02745 PF07731 Multicopper oxidase NU955_RS02745 PF07732 Multicopper oxidase NU955_RS02755 PF00872 Transposase, Mutator family NU955_RS02770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS02775 PF00873 AcrB/AcrD/AcrF family NU955_RS02785 PF02421 Ferrous iron transport protein B NU955_RS02785 PF07664 Ferrous iron transport protein B C terminus NU955_RS02785 PF07670 Nucleoside recognition NU955_RS02800 PF13411 MerR HTH family regulatory protein NU955_RS02805 PF03960 ArsC family NU955_RS02810 PF01022 Bacterial regulatory protein, arsR family NU955_RS02820 PF01758 Sodium Bile acid symporter family NU955_RS02825 PF03358 NADPH-dependent FMN reductase NU955_RS02830 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS02870 PF11202 Phosphoribosyl transferase (PRTase) NU955_RS02870 PF15608 PELOTA RNA binding domain NU955_RS02880 PF02342 TerD domain NU955_RS02885 PF02342 TerD domain NU955_RS02895 PF02342 TerD domain NU955_RS02910 PF02342 TerD domain NU955_RS02915 PF07690 Major Facilitator Superfamily NU955_RS02925 PF00892 EamA-like transporter family NU955_RS02930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NU955_RS02930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NU955_RS02935 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NU955_RS02940 PF02233 NAD(P) transhydrogenase beta subunit NU955_RS02945 PF00106 short chain dehydrogenase NU955_RS02955 PF01261 Xylose isomerase-like TIM barrel NU955_RS02960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NU955_RS02960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NU955_RS02965 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS02970 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS02970 PF00672 HAMP domain NU955_RS02970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NU955_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS02970 PF01627 Hpt domain NU955_RS02970 PF00072 Response regulator receiver domain NU955_RS02975 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS02985 PF05958 tRNA (Uracil-5-)-methyltransferase NU955_RS02990 PF04607 Region found in RelA / SpoT proteins NU955_RS02990 PF13291 ACT domain NU955_RS02990 PF02824 TGS domain NU955_RS03000 PF03819 MazG nucleotide pyrophosphohydrolase domain NU955_RS03010 PF12626 Polymerase A arginine-rich C-terminus NU955_RS03010 PF01743 Poly A polymerase head domain NU955_RS03010 PF12627 Probable RNA and SrmB- binding site of polymerase A NU955_RS03015 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NU955_RS03020 PF02548 Ketopantoate hydroxymethyltransferase NU955_RS03025 PF02569 Pantoate-beta-alanine ligase NU955_RS03030 PF03668 P-loop ATPase protein family NU955_RS03035 PF00381 PTS HPr component phosphorylation site NU955_RS03040 PF04751 Protein of unknown function (DUF615) NU955_RS03045 PF00501 AMP-binding enzyme NU955_RS03045 PF13193 AMP-binding enzyme C-terminal domain NU955_RS03050 PF02824 TGS domain NU955_RS03050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NU955_RS03050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NU955_RS03050 PF03129 Anticodon binding domain NU955_RS03055 PF05198 Translation initiation factor IF-3, N-terminal domain NU955_RS03055 PF00707 Translation initiation factor IF-3, C-terminal domain NU955_RS03060 PF02798 Glutathione S-transferase, N-terminal domain NU955_RS03060 PF00043 Glutathione S-transferase, C-terminal domain NU955_RS03065 PF09335 SNARE associated Golgi protein NU955_RS03070 PF07690 Major Facilitator Superfamily NU955_RS03080 PF01632 Ribosomal protein L35 NU955_RS03085 PF00453 Ribosomal protein L20 NU955_RS03105 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NU955_RS03105 PF01409 tRNA synthetases class II core domain (F) NU955_RS03110 PF03147 Ferredoxin-fold anticodon binding domain NU955_RS03110 PF03483 B3/4 domain NU955_RS03110 PF01588 Putative tRNA binding domain NU955_RS03110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NU955_RS03110 PF03484 tRNA synthetase B5 domain NU955_RS03115 PF00216 Bacterial DNA-binding protein NU955_RS03130 PF07497 Rho termination factor, RNA-binding domain NU955_RS03130 PF07498 Rho termination factor, N-terminal domain NU955_RS03130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NU955_RS03135 PF00085 Thioredoxin NU955_RS03140 PF02541 Ppx/GppA phosphatase family NU955_RS03145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NU955_RS03150 PF11734 TilS substrate C-terminal domain NU955_RS03150 PF01171 PP-loop family NU955_RS03150 PF09179 TilS substrate binding domain NU955_RS03155 PF03807 NADP oxidoreductase coenzyme F420-dependent NU955_RS03155 PF14748 Pyrroline-5-carboxylate reductase dimerisation NU955_RS03160 PF02325 YGGT family NU955_RS03165 PF00476 DNA polymerase family A NU955_RS03165 PF01612 3'-5' exonuclease NU955_RS03165 PF01367 5'-3' exonuclease, C-terminal SAM fold NU955_RS03165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NU955_RS03185 PF00437 Type II/IV secretion system protein NU955_RS03190 PF02566 OsmC-like protein NU955_RS03195 PF01047 MarR family NU955_RS03205 PF00795 Carbon-nitrogen hydrolase NU955_RS03250 PF00309 Sigma-54 factor, Activator interacting domain (AID) NU955_RS03250 PF04963 Sigma-54 factor, core binding domain NU955_RS03250 PF04552 Sigma-54, DNA binding domain NU955_RS03255 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NU955_RS03260 PF01722 BolA-like protein NU955_RS03265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NU955_RS03270 PF01634 ATP phosphoribosyltransferase NU955_RS03275 PF00815 Histidinol dehydrogenase NU955_RS03280 PF00155 Aminotransferase class I and II NU955_RS03285 PF04715 Anthranilate synthase component I, N terminal region NU955_RS03285 PF00425 chorismate binding enzyme NU955_RS03325 PF00293 NUDIX domain NU955_RS03330 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS03335 PF00814 Glycoprotease family NU955_RS03340 PF04445 Putative SAM-dependent methyltransferase NU955_RS03350 PF00756 Putative esterase NU955_RS03360 PF00834 Ribulose-phosphate 3 epimerase family NU955_RS03375 PF07731 Multicopper oxidase NU955_RS03375 PF07732 Multicopper oxidase NU955_RS03375 PF00394 Multicopper oxidase NU955_RS03380 PF05275 Copper resistance protein B precursor (CopB) NU955_RS03390 PF00893 Small Multidrug Resistance protein NU955_RS03395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NU955_RS03395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NU955_RS03400 PF01960 ArgJ family NU955_RS03405 PF02445 Quinolinate synthetase A protein NU955_RS03430 PF00962 Adenosine/AMP deaminase NU955_RS03435 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS03435 PF00107 Zinc-binding dehydrogenase NU955_RS03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS03440 PF03466 LysR substrate binding domain NU955_RS03445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS03445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS03445 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS03450 PF07690 Major Facilitator Superfamily NU955_RS03455 PF02515 CoA-transferase family III NU955_RS03460 PF17932 Tetracyclin repressor-like, C-terminal domain NU955_RS03460 PF00440 Bacterial regulatory proteins, tetR family NU955_RS03475 PF14537 Cytochrome c3 NU955_RS03475 PF00890 FAD binding domain NU955_RS03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS03480 PF03466 LysR substrate binding domain NU955_RS03490 PF07690 Major Facilitator Superfamily NU955_RS03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS03495 PF03466 LysR substrate binding domain NU955_RS03505 PF07687 Peptidase dimerisation domain NU955_RS03505 PF01546 Peptidase family M20/M25/M40 NU955_RS03510 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NU955_RS03510 PF12833 Helix-turn-helix domain NU955_RS03520 PF01810 LysE type translocator NU955_RS03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS03525 PF03466 LysR substrate binding domain NU955_RS03535 PF08267 Cobalamin-independent synthase, N-terminal domain NU955_RS03535 PF01717 Cobalamin-independent synthase, Catalytic domain NU955_RS03540 PF01613 Flavin reductase like domain NU955_RS03570 PF17074 Darcynin, domain of unknown function NU955_RS03600 PF02567 Phenazine biosynthesis-like protein NU955_RS03615 PF00268 Ribonucleotide reductase, small chain NU955_RS03625 PF03477 ATP cone domain NU955_RS03625 PF02867 Ribonucleotide reductase, barrel domain NU955_RS03625 PF00317 Ribonucleotide reductase, all-alpha domain NU955_RS03635 PF00072 Response regulator receiver domain NU955_RS03635 PF00486 Transcriptional regulatory protein, C terminal NU955_RS03640 PF00672 HAMP domain NU955_RS03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS03640 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS03650 PF17151 Periplasmic sensor domain NU955_RS03650 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS03655 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NU955_RS03660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NU955_RS03665 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NU955_RS03665 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NU955_RS03675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NU955_RS03675 PF10531 SLBB domain NU955_RS03675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NU955_RS03680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NU955_RS03680 PF00384 Molybdopterin oxidoreductase NU955_RS03680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NU955_RS03685 PF00146 NADH dehydrogenase NU955_RS03690 PF12838 4Fe-4S dicluster domain NU955_RS03695 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NU955_RS03700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NU955_RS03705 PF00361 Proton-conducting membrane transporter NU955_RS03705 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NU955_RS03710 PF00361 Proton-conducting membrane transporter NU955_RS03715 PF00361 Proton-conducting membrane transporter NU955_RS03725 PF00313 'Cold-shock' DNA-binding domain NU955_RS03730 PF03466 LysR substrate binding domain NU955_RS03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS03735 PF00175 Oxidoreductase NAD-binding domain NU955_RS03735 PF00970 Oxidoreductase FAD-binding domain NU955_RS03750 PF05552 Conserved TM helix NU955_RS03765 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS03770 PF13533 Biotin-lipoyl like NU955_RS03795 PF09334 tRNA synthetases class I (M) NU955_RS03795 PF01588 Putative tRNA binding domain NU955_RS03805 PF10609 NUBPL iron-transfer P-loop NTPase NU955_RS03810 PF01048 Phosphorylase superfamily NU955_RS03825 PF00692 dUTPase NU955_RS03855 PF01207 Dihydrouridine synthase (Dus) NU955_RS03865 PF00448 SRP54-type protein, GTPase domain NU955_RS03865 PF02881 SRP54-type protein, helical bundle domain NU955_RS03865 PF02978 Signal peptide binding domain NU955_RS03870 PF03309 Type III pantothenate kinase NU955_RS03880 PF01925 Sulfite exporter TauE/SafE NU955_RS03890 PF06470 SMC proteins Flexible Hinge Domain NU955_RS03890 PF02463 RecF/RecN/SMC N terminal domain NU955_RS03900 PF00533 BRCA1 C Terminus (BRCT) domain NU955_RS03900 PF01653 NAD-dependent DNA ligase adenylation domain NU955_RS03900 PF03120 NAD-dependent DNA ligase OB-fold domain NU955_RS03900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NU955_RS03900 PF12826 Helix-hairpin-helix motif NU955_RS03905 PF00210 Ferritin-like domain NU955_RS03910 PF07690 Major Facilitator Superfamily NU955_RS03915 PF00982 Glycosyltransferase family 20 NU955_RS03920 PF02358 Trehalose-phosphatase NU955_RS03925 PF08241 Methyltransferase domain NU955_RS03925 PF12697 Alpha/beta hydrolase family NU955_RS03930 PF00202 Aminotransferase class-III NU955_RS03930 PF06968 Biotin and Thiamin Synthesis associated domain NU955_RS03930 PF04055 Radical SAM superfamily NU955_RS03935 PF00155 Aminotransferase class I and II NU955_RS03950 PF00849 RNA pseudouridylate synthase NU955_RS03950 PF01479 S4 domain NU955_RS03955 PF04079 Segregation and condensation complex subunit ScpB NU955_RS03960 PF02616 Segregation and condensation protein ScpA NU955_RS03965 PF01300 Telomere recombination NU955_RS03970 PF04315 Elongation factor P hydroxylase NU955_RS03975 PF02620 Large ribosomal RNA subunit accumulation protein YceD NU955_RS03980 PF01783 Ribosomal L32p protein family NU955_RS03985 PF00698 Acyl transferase domain NU955_RS03995 PF00550 Phosphopantetheine attachment site NU955_RS04000 PF04972 BON domain NU955_RS04000 PF01476 LysM domain NU955_RS04005 PF03070 TENA/THI-4/PQQC family NU955_RS04005 PF02581 Thiamine monophosphate synthase NU955_RS04005 PF08543 Phosphomethylpyrimidine kinase NU955_RS04015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NU955_RS04030 PF02261 Aspartate decarboxylase NU955_RS04035 PF01195 Peptidyl-tRNA hydrolase NU955_RS04040 PF01386 Ribosomal L25p family NU955_RS04045 PF14572 Phosphoribosyl synthetase-associated domain NU955_RS04045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NU955_RS04070 PF08544 GHMP kinases C terminal NU955_RS04070 PF00288 GHMP kinases N terminal domain NU955_RS04075 PF03550 Outer membrane lipoprotein LolB NU955_RS04085 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NU955_RS04085 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NU955_RS04085 PF01488 Shikimate / quinate 5-dehydrogenase NU955_RS04090 PF10410 DnaB-helicase binding domain of primase NU955_RS04090 PF08278 DNA primase DnaG DnaB-binding NU955_RS04090 PF08275 DNA primase catalytic core, N-terminal domain NU955_RS04090 PF01807 CHC2 zinc finger NU955_RS04095 PF13525 Outer membrane lipoprotein NU955_RS04100 PF00849 RNA pseudouridylate synthase NU955_RS04100 PF01479 S4 domain NU955_RS04105 PF02578 Multi-copper polyphenol oxidoreductase laccase NU955_RS04110 PF03358 NADPH-dependent FMN reductase NU955_RS04115 PF01668 SmpB protein NU955_RS04120 PF01467 Cytidylyltransferase-like NU955_RS04125 PF00037 4Fe-4S binding domain NU955_RS04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS04145 PF03466 LysR substrate binding domain NU955_RS04150 PF00180 Isocitrate/isopropylmalate dehydrogenase NU955_RS04155 PF02028 BCCT, betaine/carnitine/choline family transporter NU955_RS04160 PF07859 alpha/beta hydrolase fold NU955_RS04165 PF00355 Rieske [2Fe-2S] domain NU955_RS04165 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NU955_RS04170 PF00171 Aldehyde dehydrogenase family NU955_RS04175 PF00970 Oxidoreductase FAD-binding domain NU955_RS04175 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS04175 PF00175 Oxidoreductase NAD-binding domain NU955_RS04190 PF00795 Carbon-nitrogen hydrolase NU955_RS04190 PF02540 NAD synthase NU955_RS04200 PF02678 Pirin NU955_RS04200 PF05726 Pirin C-terminal cupin domain NU955_RS04205 PF03653 Uncharacterised protein family (UPF0093) NU955_RS04210 PF00109 Beta-ketoacyl synthase, N-terminal domain NU955_RS04210 PF02801 Beta-ketoacyl synthase, C-terminal domain NU955_RS04220 PF00164 Ribosomal protein S12/S23 NU955_RS04225 PF00177 Ribosomal protein S7p/S5e NU955_RS04230 PF00009 Elongation factor Tu GTP binding domain NU955_RS04230 PF03144 Elongation factor Tu domain 2 NU955_RS04230 PF14492 Elongation Factor G, domain II NU955_RS04230 PF03764 Elongation factor G, domain IV NU955_RS04230 PF00679 Elongation factor G C-terminus NU955_RS04235 PF03144 Elongation factor Tu domain 2 NU955_RS04235 PF03143 Elongation factor Tu C-terminal domain NU955_RS04235 PF00009 Elongation factor Tu GTP binding domain NU955_RS04250 PF00583 Acetyltransferase (GNAT) family NU955_RS04255 PF04377 Arginine-tRNA-protein transferase, C terminus NU955_RS04255 PF04376 Arginine-tRNA-protein transferase, N terminus NU955_RS04260 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NU955_RS04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS04270 PF01580 FtsK/SpoIIIE family NU955_RS04270 PF09397 Ftsk gamma domain NU955_RS04270 PF17854 FtsK alpha domain NU955_RS04270 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NU955_RS04275 PF01810 LysE type translocator NU955_RS04285 PF03776 Septum formation topological specificity factor MinE NU955_RS04290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NU955_RS04295 PF03775 Septum formation inhibitor MinC, C-terminal domain NU955_RS04305 PF01553 Acyltransferase NU955_RS04310 PF00691 OmpA family NU955_RS04310 PF13488 Glycine zipper NU955_RS04315 PF00580 UvrD/REP helicase N-terminal domain NU955_RS04315 PF13361 UvrD-like helicase C-terminal domain NU955_RS04320 PF00692 dUTPase NU955_RS04325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NU955_RS04325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NU955_RS04325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NU955_RS04325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NU955_RS04330 PF00696 Amino acid kinase family NU955_RS04340 PF13230 Glutamine amidotransferases class-II NU955_RS04345 PF01814 Hemerythrin HHE cation binding domain NU955_RS04355 PF03658 RnfH family Ubiquitin NU955_RS04360 PF04355 SmpA / OmlA family NU955_RS04365 PF01475 Ferric uptake regulator family NU955_RS04370 PF00437 Type II/IV secretion system protein NU955_RS04375 PF00437 Type II/IV secretion system protein NU955_RS04380 PF01168 Alanine racemase, N-terminal domain NU955_RS04390 PF12320 Type 5 capsule protein repressor C-terminal domain NU955_RS04390 PF00149 Calcineurin-like phosphoesterase NU955_RS04410 PF01370 NAD dependent epimerase/dehydratase family NU955_RS04410 PF08338 Domain of unknown function (DUF1731) NU955_RS04415 PF01266 FAD dependent oxidoreductase NU955_RS04420 PF00490 Delta-aminolevulinic acid dehydratase NU955_RS04425 PF03061 Thioesterase superfamily NU955_RS04430 PF13533 Biotin-lipoyl like NU955_RS04435 PF07690 Major Facilitator Superfamily NU955_RS04480 PF08671 Anti-repressor SinI NU955_RS04480 PF01381 Helix-turn-helix NU955_RS04510 PF00083 Sugar (and other) transporter NU955_RS04515 PF00701 Dihydrodipicolinate synthetase family NU955_RS04540 PF13520 Amino acid permease NU955_RS04545 PF02574 Homocysteine S-methyltransferase NU955_RS04555 PF06039 Malate:quinone oxidoreductase (Mqo) NU955_RS04560 PF05199 GMC oxidoreductase NU955_RS04560 PF00732 GMC oxidoreductase NU955_RS04565 PF00171 Aldehyde dehydrogenase family NU955_RS04570 PF00440 Bacterial regulatory proteins, tetR family NU955_RS04570 PF13977 BetI-type transcriptional repressor, C-terminal NU955_RS04575 PF02028 BCCT, betaine/carnitine/choline family transporter NU955_RS04580 PF02028 BCCT, betaine/carnitine/choline family transporter NU955_RS04590 PF03061 Thioesterase superfamily NU955_RS04600 PF07683 Cobalamin synthesis protein cobW C-terminal domain NU955_RS04600 PF02492 CobW/HypB/UreG, nucleotide-binding domain NU955_RS04605 PF00375 Sodium:dicarboxylate symporter family NU955_RS04610 PF07152 YaeQ protein NU955_RS04615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NU955_RS04620 PF14883 Hypothetical glycosyl hydrolase family 13 NU955_RS04620 PF01522 Polysaccharide deacetylase NU955_RS04625 PF00535 Glycosyl transferase family 2 NU955_RS04635 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS04650 PF09339 IclR helix-turn-helix domain NU955_RS04650 PF01614 Bacterial transcriptional regulator NU955_RS04655 PF00355 Rieske [2Fe-2S] domain NU955_RS04665 PF00355 Rieske [2Fe-2S] domain NU955_RS04675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NU955_RS04680 PF14759 Reductase C-terminal NU955_RS04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS04685 PF07690 Major Facilitator Superfamily NU955_RS04695 PF12697 Alpha/beta hydrolase family NU955_RS04705 PF03447 Homoserine dehydrogenase, NAD binding domain NU955_RS04705 PF01958 Domain of unknown function DUF108 NU955_RS04710 PF00171 Aldehyde dehydrogenase family NU955_RS04715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NU955_RS04715 PF00205 Thiamine pyrophosphate enzyme, central domain NU955_RS04715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NU955_RS04725 PF07690 Major Facilitator Superfamily NU955_RS04730 PF01327 Polypeptide deformylase NU955_RS04735 PF04960 Glutaminase NU955_RS04740 PF02311 AraC-like ligand binding domain NU955_RS04740 PF12833 Helix-turn-helix domain NU955_RS04745 PF07690 Major Facilitator Superfamily NU955_RS04750 PF01263 Aldose 1-epimerase NU955_RS04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS04760 PF03466 LysR substrate binding domain NU955_RS04770 PF07690 Major Facilitator Superfamily NU955_RS04775 PF00456 Transketolase, thiamine diphosphate binding domain NU955_RS04780 PF02779 Transketolase, pyrimidine binding domain NU955_RS04780 PF02780 Transketolase, C-terminal domain NU955_RS04815 PF02574 Homocysteine S-methyltransferase NU955_RS04815 PF00809 Pterin binding enzyme NU955_RS04815 PF02965 Vitamin B12 dependent methionine synthase, activation domain NU955_RS04815 PF02310 B12 binding domain NU955_RS04815 PF02607 B12 binding domain NU955_RS04820 PF01384 Phosphate transporter family NU955_RS04825 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS04840 PF03781 Sulfatase-modifying factor enzyme 1 NU955_RS04845 PF00884 Sulfatase NU955_RS04855 PF01106 NifU-like domain NU955_RS04855 PF01521 Iron-sulphur cluster biosynthesis NU955_RS04860 PF07715 TonB-dependent Receptor Plug Domain NU955_RS04860 PF00593 TonB dependent receptor NU955_RS04870 PF00561 alpha/beta hydrolase fold NU955_RS04875 PF00484 Carbonic anhydrase NU955_RS04880 PF13472 GDSL-like Lipase/Acylhydrolase family NU955_RS04885 PF00005 ABC transporter NU955_RS04895 PF01694 Rhomboid family NU955_RS04900 PF00912 Transglycosylase NU955_RS04905 PF13089 Polyphosphate kinase N-terminal domain NU955_RS04905 PF13090 Polyphosphate kinase C-terminal domain 2 NU955_RS04905 PF02503 Polyphosphate kinase middle domain NU955_RS04905 PF17941 Polyphosphate kinase C-terminal domain 1 NU955_RS04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS04920 PF03466 LysR substrate binding domain NU955_RS04925 PF00561 alpha/beta hydrolase fold NU955_RS04930 PF18113 Rubredoxin binding C-terminal domain NU955_RS04930 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS04935 PF00301 Rubredoxin NU955_RS04950 PF00152 tRNA synthetases class II (D, K and N) NU955_RS04950 PF01336 OB-fold nucleic acid binding domain NU955_RS04955 PF14052 Capsule assembly protein Wzi NU955_RS04965 PF01507 Phosphoadenosine phosphosulfate reductase family NU955_RS04970 PF00009 Elongation factor Tu GTP binding domain NU955_RS04985 PF03600 Citrate transporter NU955_RS04990 PF00571 CBS domain NU955_RS04990 PF03471 Transporter associated domain NU955_RS04990 PF01595 Cyclin M transmembrane N-terminal domain NU955_RS04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS04995 PF03466 LysR substrate binding domain NU955_RS05000 PF00463 Isocitrate lyase family NU955_RS05015 PF01774 UreD urease accessory protein NU955_RS05020 PF00547 Urease, gamma subunit NU955_RS05025 PF00699 Urease beta subunit NU955_RS05030 PF01979 Amidohydrolase family NU955_RS05030 PF00449 Urease alpha-subunit, N-terminal domain NU955_RS05035 PF05194 UreE urease accessory protein, C-terminal domain NU955_RS05035 PF02814 UreE urease accessory protein, N-terminal domain NU955_RS05040 PF01730 UreF NU955_RS05045 PF02492 CobW/HypB/UreG, nucleotide-binding domain NU955_RS05060 PF03717 Penicillin-binding Protein dimerisation domain NU955_RS05060 PF00905 Penicillin binding protein transpeptidase domain NU955_RS05075 PF05191 Adenylate kinase, active site lid NU955_RS05085 PF00730 HhH-GPD superfamily base excision DNA repair protein NU955_RS05085 PF10576 Iron-sulfur binding domain of endonuclease III NU955_RS05085 PF00633 Helix-hairpin-helix motif NU955_RS05090 PF04060 Putative Fe-S cluster NU955_RS05095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NU955_RS05095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NU955_RS05105 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NU955_RS05110 PF02590 Predicted SPOUT methyltransferase NU955_RS05115 PF05362 Lon protease (S16) C-terminal proteolytic domain NU955_RS05115 PF02190 ATP-dependent protease La (LON) substrate-binding domain NU955_RS05115 PF00004 ATPase family associated with various cellular activities (AAA) NU955_RS05120 PF13018 Extended Signal Peptide of Type V secretion system NU955_RS05120 PF03895 YadA-like membrane anchor domain NU955_RS05120 PF05658 Head domain of trimeric autotransporter adhesin NU955_RS05120 PF05662 Coiled stalk of trimeric autotransporter adhesin NU955_RS05125 PF04355 SmpA / OmlA family NU955_RS05125 PF00691 OmpA family NU955_RS05130 PF01812 5-formyltetrahydrofolate cyclo-ligase family NU955_RS05170 PF05195 Aminopeptidase P, N-terminal domain NU955_RS05170 PF00557 Metallopeptidase family M24 NU955_RS05175 PF01494 FAD binding domain NU955_RS05180 PF01494 FAD binding domain NU955_RS05190 PF13411 MerR HTH family regulatory protein NU955_RS05200 PF01810 LysE type translocator NU955_RS05205 PF03466 LysR substrate binding domain NU955_RS05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS05215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NU955_RS05220 PF02021 Uncharacterised protein family UPF0102 NU955_RS05225 PF04972 BON domain NU955_RS05235 PF00293 NUDIX domain NU955_RS05235 PF09297 NADH pyrophosphatase zinc ribbon domain NU955_RS05245 PF00929 Exonuclease NU955_RS05250 PF01464 Transglycosylase SLT domain NU955_RS05250 PF01476 LysM domain NU955_RS05250 PF01464 Transglycosylase SLT domain NU955_RS05250 PF01476 LysM domain NU955_RS05255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NU955_RS05260 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS05265 PF12911 N-terminal TM domain of oligopeptide transport permease C NU955_RS05265 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS05270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NU955_RS05270 PF00005 ABC transporter NU955_RS05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS05275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NU955_RS05280 PF07715 TonB-dependent Receptor Plug Domain NU955_RS05280 PF00593 TonB dependent receptor NU955_RS05290 PF00929 Exonuclease NU955_RS05295 PF01979 Amidohydrolase family NU955_RS05300 PF01590 GAF domain NU955_RS05300 PF00360 Phytochrome region NU955_RS05300 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS05300 PF00563 EAL domain NU955_RS05305 PF00764 Arginosuccinate synthase NU955_RS05310 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS05310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NU955_RS05320 PF13176 Tetratricopeptide repeat NU955_RS05320 PF00515 Tetratricopeptide repeat NU955_RS05330 PF01042 Endoribonuclease L-PSP NU955_RS05335 PF01266 FAD dependent oxidoreductase NU955_RS05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS05340 PF03466 LysR substrate binding domain NU955_RS05350 PF03180 NLPA lipoprotein NU955_RS05370 PF03527 RHS protein NU955_RS05410 PF13737 Transposase DDE domain NU955_RS05440 PF00324 Amino acid permease NU955_RS05445 PF01266 FAD dependent oxidoreductase NU955_RS05450 PF00324 Amino acid permease NU955_RS05460 PF00392 Bacterial regulatory proteins, gntR family NU955_RS05460 PF07729 FCD domain NU955_RS05470 PF00171 Aldehyde dehydrogenase family NU955_RS05480 PF00202 Aminotransferase class-III NU955_RS05485 PF04958 Arginine N-succinyltransferase beta subunit NU955_RS05490 PF00324 Amino acid permease NU955_RS05495 PF00171 Aldehyde dehydrogenase family NU955_RS05500 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NU955_RS05500 PF12833 Helix-turn-helix domain NU955_RS05505 PF00892 EamA-like transporter family NU955_RS05510 PF08666 SAF domain NU955_RS05510 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NU955_RS05515 PF07690 Major Facilitator Superfamily NU955_RS05520 PF13378 Enolase C-terminal domain-like NU955_RS05525 PF00701 Dihydrodipicolinate synthetase family NU955_RS05530 PF00171 Aldehyde dehydrogenase family NU955_RS05535 PF07729 FCD domain NU955_RS05535 PF00392 Bacterial regulatory proteins, gntR family NU955_RS05540 PF07519 Tannase and feruloyl esterase NU955_RS05555 PF03573 outer membrane porin, OprD family NU955_RS05560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS05560 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS05560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS05570 PF00171 Aldehyde dehydrogenase family NU955_RS05575 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS05580 PF07690 Major Facilitator Superfamily NU955_RS05595 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS05595 PF00175 Oxidoreductase NAD-binding domain NU955_RS05600 PF00355 Rieske [2Fe-2S] domain NU955_RS05610 PF03781 Sulfatase-modifying factor enzyme 1 NU955_RS05615 PF00884 Sulfatase NU955_RS05620 PF07690 Major Facilitator Superfamily NU955_RS05625 PF03573 outer membrane porin, OprD family NU955_RS05630 PF05199 GMC oxidoreductase NU955_RS05635 PF07859 alpha/beta hydrolase fold NU955_RS05640 PF00106 short chain dehydrogenase NU955_RS05645 PF00743 Flavin-binding monooxygenase-like NU955_RS05650 PF12833 Helix-turn-helix domain NU955_RS05655 PF04072 Leucine carboxyl methyltransferase NU955_RS05660 PF00743 Flavin-binding monooxygenase-like NU955_RS05665 PF00106 short chain dehydrogenase NU955_RS05675 PF00440 Bacterial regulatory proteins, tetR family NU955_RS05675 PF17932 Tetracyclin repressor-like, C-terminal domain NU955_RS05680 PF02678 Pirin NU955_RS05680 PF17954 Quercetinase C-terminal cupin domain NU955_RS05690 PF00106 short chain dehydrogenase NU955_RS05695 PF00743 Flavin-binding monooxygenase-like NU955_RS05705 PF00860 Permease family NU955_RS05710 PF00962 Adenosine/AMP deaminase NU955_RS05720 PF01292 Prokaryotic cytochrome b561 NU955_RS05730 PF01351 Ribonuclease HII NU955_RS05735 PF02599 Global regulator protein family NU955_RS05740 PF00696 Amino acid kinase family NU955_RS05740 PF01842 ACT domain NU955_RS05740 PF13840 ACT domain NU955_RS05820 PF00145 C-5 cytosine-specific DNA methylase NU955_RS05885 PF06381 Protein of unknown function (DUF1073) NU955_RS05900 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) NU955_RS05960 PF05154 TM2 domain NU955_RS05985 PF00149 Calcineurin-like phosphoesterase NU955_RS06015 PF08019 Phosphoethanolamine transferase EptA/EptB NU955_RS06015 PF00884 Sulfatase NU955_RS06020 PF13356 Arm DNA-binding domain NU955_RS06020 PF00589 Phage integrase family NU955_RS06025 PF02272 DHHA1 domain NU955_RS06025 PF01411 tRNA synthetases class II (A) NU955_RS06025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NU955_RS06030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NU955_RS06030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NU955_RS06035 PF13393 Histidyl-tRNA synthetase NU955_RS06040 PF00709 Adenylosuccinate synthetase NU955_RS06055 PF00248 Aldo/keto reductase family NU955_RS06060 PF00027 Cyclic nucleotide-binding domain NU955_RS06060 PF13545 Crp-like helix-turn-helix domain NU955_RS06070 PF02566 OsmC-like protein NU955_RS06085 PF10431 C-terminal, D2-small domain, of ClpB protein NU955_RS06085 PF00004 ATPase family associated with various cellular activities (AAA) NU955_RS06085 PF07724 AAA domain (Cdc48 subfamily) NU955_RS06085 PF17871 AAA lid domain NU955_RS06085 PF02861 Clp amino terminal domain, pathogenicity island component NU955_RS06100 PF10672 S-adenosylmethionine-dependent methyltransferase NU955_RS06100 PF02926 THUMP domain NU955_RS06100 PF01170 Putative RNA methylase family UPF0020 NU955_RS06110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NU955_RS06110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NU955_RS06115 PF01979 Amidohydrolase family NU955_RS06120 PF13488 Glycine zipper NU955_RS06120 PF00691 OmpA family NU955_RS06130 PF00043 Glutathione S-transferase, C-terminal domain NU955_RS06130 PF13417 Glutathione S-transferase, N-terminal domain NU955_RS06135 PF02390 Putative methyltransferase NU955_RS06145 PF02798 Glutathione S-transferase, N-terminal domain NU955_RS06145 PF00043 Glutathione S-transferase, C-terminal domain NU955_RS06155 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS06155 PF13192 Thioredoxin domain NU955_RS06175 PF10417 C-terminal domain of 1-Cys peroxiredoxin NU955_RS06175 PF00578 AhpC/TSA family NU955_RS06180 PF00270 DEAD/DEAH box helicase NU955_RS06180 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NU955_RS06180 PF11898 Domain of unknown function (DUF3418) NU955_RS06180 PF04408 Helicase associated domain (HA2) NU955_RS06180 PF00271 Helicase conserved C-terminal domain NU955_RS06185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NU955_RS06185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NU955_RS06195 PF07690 Major Facilitator Superfamily NU955_RS06200 PF03594 Benzoate membrane transport protein NU955_RS06205 PF00106 short chain dehydrogenase NU955_RS06210 PF00970 Oxidoreductase FAD-binding domain NU955_RS06210 PF00175 Oxidoreductase NAD-binding domain NU955_RS06210 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS06220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NU955_RS06220 PF00355 Rieske [2Fe-2S] domain NU955_RS06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS06230 PF03466 LysR substrate binding domain NU955_RS06240 PF00403 Heavy-metal-associated domain NU955_RS06245 PF00376 MerR family regulatory protein NU955_RS06245 PF09278 MerR, DNA binding NU955_RS06280 PF02601 Exonuclease VII, large subunit NU955_RS06280 PF13742 OB-fold nucleic acid binding domain NU955_RS06310 PF01810 LysE type translocator NU955_RS06315 PF00313 'Cold-shock' DNA-binding domain NU955_RS06325 PF14748 Pyrroline-5-carboxylate reductase dimerisation NU955_RS06325 PF03807 NADP oxidoreductase coenzyme F420-dependent NU955_RS06350 PF07690 Major Facilitator Superfamily NU955_RS06355 PF01638 HxlR-like helix-turn-helix NU955_RS06455 PF01381 Helix-turn-helix NU955_RS06605 PF00589 Phage integrase family NU955_RS06615 PF01406 tRNA synthetases class I (C) catalytic domain NU955_RS06615 PF09190 DALR domain NU955_RS06620 PF00571 CBS domain NU955_RS06620 PF01380 SIS domain NU955_RS06635 PF03968 OstA-like protein NU955_RS06640 PF00005 ABC transporter NU955_RS06640 PF12399 Branched-chain amino acid ATP-binding cassette transporter NU955_RS06645 PF02321 Outer membrane efflux protein NU955_RS06650 PF00664 ABC transporter transmembrane region NU955_RS06650 PF00005 ABC transporter NU955_RS06650 PF03412 Peptidase C39 family NU955_RS06660 PF01205 Uncharacterized protein family UPF0029 NU955_RS06665 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS06675 PF01596 O-methyltransferase NU955_RS06685 PF11953 Domain of unknown function (DUF3470) NU955_RS06685 PF00037 4Fe-4S binding domain NU955_RS06695 PF01624 MutS domain I NU955_RS06695 PF05188 MutS domain II NU955_RS06695 PF05192 MutS domain III NU955_RS06695 PF05190 MutS family domain IV NU955_RS06695 PF00488 MutS domain V NU955_RS06700 PF01037 Lrp/AsnC ligand binding domain NU955_RS06705 PF00892 EamA-like transporter family NU955_RS06710 PF03707 Bacterial signalling protein N terminal repeat NU955_RS06710 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS06710 PF00563 EAL domain NU955_RS06715 PF03279 Bacterial lipid A biosynthesis acyltransferase NU955_RS06730 PF07690 Major Facilitator Superfamily NU955_RS06750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NU955_RS06750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NU955_RS06770 PF13419 Haloacid dehalogenase-like hydrolase NU955_RS06885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS06885 PF03466 LysR substrate binding domain NU955_RS06890 PF01566 Natural resistance-associated macrophage protein NU955_RS06895 PF03746 LamB/YcsF family NU955_RS06900 PF07286 Protein of unknown function (DUF1445) NU955_RS06910 PF02785 Biotin carboxylase C-terminal domain NU955_RS06910 PF00289 Biotin carboxylase, N-terminal domain NU955_RS06910 PF00364 Biotin-requiring enzyme NU955_RS06910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NU955_RS06915 PF00654 Voltage gated chloride channel NU955_RS06920 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NU955_RS06920 PF17287 POTRA domain NU955_RS06920 PF08479 POTRA domain, ShlB-type NU955_RS06925 PF13018 Extended Signal Peptide of Type V secretion system NU955_RS06925 PF13332 Hemagglutinin repeat NU955_RS06925 PF04829 Pre-toxin domain with VENN motif NU955_RS06925 PF05860 haemagglutination activity domain NU955_RS06950 PF13276 HTH-like domain NU955_RS06950 PF13333 Integrase core domain NU955_RS06950 PF00665 Integrase core domain NU955_RS06970 PF00694 Aconitase C-terminal domain NU955_RS06975 PF00330 Aconitase family (aconitate hydratase) NU955_RS06985 PF02515 CoA-transferase family III NU955_RS06990 PF00682 HMGL-like NU955_RS06995 PF07690 Major Facilitator Superfamily NU955_RS07000 PF00199 Catalase NU955_RS07005 PF01292 Prokaryotic cytochrome b561 NU955_RS07025 PF12697 Alpha/beta hydrolase family NU955_RS07030 PF01613 Flavin reductase like domain NU955_RS07035 PF00296 Luciferase-like monooxygenase NU955_RS07040 PF00171 Aldehyde dehydrogenase family NU955_RS07050 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NU955_RS07060 PF00171 Aldehyde dehydrogenase family NU955_RS07065 PF02627 Carboxymuconolactone decarboxylase family NU955_RS07070 PF03466 LysR substrate binding domain NU955_RS07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07075 PF02525 Flavodoxin-like fold NU955_RS07080 PF01614 Bacterial transcriptional regulator NU955_RS07080 PF09339 IclR helix-turn-helix domain NU955_RS07085 PF01494 FAD binding domain NU955_RS07090 PF07702 UTRA domain NU955_RS07090 PF00392 Bacterial regulatory proteins, gntR family NU955_RS07100 PF08402 TOBE domain NU955_RS07100 PF00005 ABC transporter NU955_RS07105 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS07110 PF01266 FAD dependent oxidoreductase NU955_RS07115 PF00266 Aminotransferase class-V NU955_RS07120 PF13419 Haloacid dehalogenase-like hydrolase NU955_RS07125 PF07690 Major Facilitator Superfamily NU955_RS07130 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS07130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS07130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS07135 PF02515 CoA-transferase family III NU955_RS07140 PF09339 IclR helix-turn-helix domain NU955_RS07145 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS07150 PF03060 Nitronate monooxygenase NU955_RS07155 PF07690 Major Facilitator Superfamily NU955_RS07160 PF09339 IclR helix-turn-helix domain NU955_RS07165 PF02803 Thiolase, C-terminal domain NU955_RS07165 PF00108 Thiolase, N-terminal domain NU955_RS07170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NU955_RS07170 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NU955_RS07170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NU955_RS07180 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS07185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS07185 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS07185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS07190 PF07690 Major Facilitator Superfamily NU955_RS07195 PF01144 Coenzyme A transferase NU955_RS07200 PF01144 Coenzyme A transferase NU955_RS07210 PF07690 Major Facilitator Superfamily NU955_RS07220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS07220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS07220 PF12806 Acetyl-CoA dehydrogenase C-terminal like NU955_RS07220 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07235 PF03466 LysR substrate binding domain NU955_RS07240 PF00682 HMGL-like NU955_RS07245 PF00289 Biotin carboxylase, N-terminal domain NU955_RS07245 PF02785 Biotin carboxylase C-terminal domain NU955_RS07245 PF00364 Biotin-requiring enzyme NU955_RS07245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NU955_RS07245 PF18140 Propionyl-coenzyme A carboxylase BT domain NU955_RS07250 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS07255 PF01039 Carboxyl transferase domain NU955_RS07260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS07260 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS07260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS07265 PF00440 Bacterial regulatory proteins, tetR family NU955_RS07270 PF13193 AMP-binding enzyme C-terminal domain NU955_RS07270 PF00501 AMP-binding enzyme NU955_RS07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07290 PF03466 LysR substrate binding domain NU955_RS07305 PF13333 Integrase core domain NU955_RS07305 PF00665 Integrase core domain NU955_RS07305 PF13276 HTH-like domain NU955_RS07335 PF00994 Probable molybdopterin binding domain NU955_RS07335 PF02464 Competence-damaged protein NU955_RS07335 PF18146 Damage-inducible protein CinA KH domain NU955_RS07345 PF18011 C-terminal domain found in long catalases NU955_RS07345 PF06628 Catalase-related immune-responsive NU955_RS07345 PF00199 Catalase NU955_RS07370 PF00717 Peptidase S24-like NU955_RS07380 PF01037 Lrp/AsnC ligand binding domain NU955_RS07380 PF13404 AsnC-type helix-turn-helix domain NU955_RS07390 PF09308 LuxQ, periplasmic NU955_RS07390 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS07390 PF00072 Response regulator receiver domain NU955_RS07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS07395 PF00072 Response regulator receiver domain NU955_RS07410 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS07415 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS07420 PF00005 ABC transporter NU955_RS07425 PF00497 Bacterial extracellular solute-binding proteins, family 3 NU955_RS07430 PF00497 Bacterial extracellular solute-binding proteins, family 3 NU955_RS07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07440 PF03466 LysR substrate binding domain NU955_RS07445 PF01810 LysE type translocator NU955_RS07450 PF00266 Aminotransferase class-V NU955_RS07460 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS07465 PF00581 Rhodanese-like domain NU955_RS07475 PF03466 LysR substrate binding domain NU955_RS07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07480 PF02798 Glutathione S-transferase, N-terminal domain NU955_RS07485 PF14834 Glutathione S-transferase, C-terminal domain NU955_RS07485 PF02798 Glutathione S-transferase, N-terminal domain NU955_RS07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07490 PF03466 LysR substrate binding domain NU955_RS07495 PF03788 LrgA family NU955_RS07500 PF04172 LrgB-like family NU955_RS07505 PF00155 Aminotransferase class I and II NU955_RS07505 PF00392 Bacterial regulatory proteins, gntR family NU955_RS07520 PF07690 Major Facilitator Superfamily NU955_RS07530 PF03466 LysR substrate binding domain NU955_RS07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07535 PF16957 Malonate decarboxylase, alpha subunit, transporter NU955_RS07540 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NU955_RS07545 PF06857 Malonate decarboxylase delta subunit (MdcD) NU955_RS07550 PF01039 Carboxyl transferase domain NU955_RS07560 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NU955_RS07565 PF00698 Acyl transferase domain NU955_RS07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07580 PF03466 LysR substrate binding domain NU955_RS07585 PF00155 Aminotransferase class I and II NU955_RS07585 PF00392 Bacterial regulatory proteins, gntR family NU955_RS07595 PF02322 Cytochrome bd terminal oxidase subunit II NU955_RS07600 PF01654 Cytochrome bd terminal oxidase subunit I NU955_RS07615 PF00296 Luciferase-like monooxygenase NU955_RS07620 PF00083 Sugar (and other) transporter NU955_RS07630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NU955_RS07635 PF00005 ABC transporter NU955_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS07645 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NU955_RS07650 PF01177 Asp/Glu/Hydantoin racemase NU955_RS07655 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NU955_RS07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07665 PF03466 LysR substrate binding domain NU955_RS07675 PF13382 Adenine deaminase C-terminal domain NU955_RS07675 PF01979 Amidohydrolase family NU955_RS07685 PF03960 ArsC family NU955_RS07690 PF01022 Bacterial regulatory protein, arsR family NU955_RS07695 PF01758 Sodium Bile acid symporter family NU955_RS07700 PF03466 LysR substrate binding domain NU955_RS07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07715 PF13192 Thioredoxin domain NU955_RS07715 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS07730 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS07735 PF00588 SpoU rRNA Methylase family NU955_RS07740 PF01336 OB-fold nucleic acid binding domain NU955_RS07740 PF07733 Bacterial DNA polymerase III alpha NTPase domain NU955_RS07740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NU955_RS07740 PF02811 PHP domain NU955_RS07740 PF14579 Helix-hairpin-helix motif NU955_RS07745 PF17763 Glutaminase/Asparaginase C-terminal domain NU955_RS07745 PF00710 Asparaginase, N-terminal NU955_RS07750 PF00375 Sodium:dicarboxylate symporter family NU955_RS07755 PF00155 Aminotransferase class I and II NU955_RS07760 PF01641 SelR domain NU955_RS07765 PF00255 Glutathione peroxidase NU955_RS07770 PF12852 Cupin NU955_RS07770 PF12833 Helix-turn-helix domain NU955_RS07780 PF00155 Aminotransferase class I and II NU955_RS07785 PF01909 Nucleotidyltransferase domain NU955_RS07785 PF08335 GlnD PII-uridylyltransferase NU955_RS07785 PF01966 HD domain NU955_RS07790 PF02222 ATP-grasp domain NU955_RS07800 PF05437 Branched-chain amino acid transport protein (AzlD) NU955_RS07805 PF03591 AzlC protein NU955_RS07830 PF01926 50S ribosome-binding GTPase NU955_RS07830 PF06071 Protein of unknown function (DUF933) NU955_RS07835 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS07840 PF00005 ABC transporter NU955_RS07840 PF09383 NIL domain NU955_RS07845 PF03180 NLPA lipoprotein NU955_RS07850 PF03180 NLPA lipoprotein NU955_RS07855 PF00296 Luciferase-like monooxygenase NU955_RS07865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS07865 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS07880 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS07890 PF00005 ABC transporter NU955_RS07900 PF01037 Lrp/AsnC ligand binding domain NU955_RS07905 PF01709 Transcriptional regulator NU955_RS07915 PF00440 Bacterial regulatory proteins, tetR family NU955_RS07935 PF03466 LysR substrate binding domain NU955_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS07945 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NU955_RS07955 PF00892 EamA-like transporter family NU955_RS07970 PF12833 Helix-turn-helix domain NU955_RS07970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NU955_RS07985 PF00577 Outer membrane usher protein NU955_RS07985 PF13954 PapC N-terminal domain NU955_RS07985 PF13953 PapC C-terminal domain NU955_RS07990 PF02753 Pili assembly chaperone PapD, C-terminal domain NU955_RS07990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NU955_RS07995 PF16970 Type-1 fimbrial protein, A NU955_RS08010 PF04055 Radical SAM superfamily NU955_RS08010 PF06968 Biotin and Thiamin Synthesis associated domain NU955_RS08015 PF08331 Domain of unknown function (DUF1730) NU955_RS08020 PF03853 YjeF-related protein N-terminus NU955_RS08020 PF01256 Carbohydrate kinase NU955_RS08025 PF02075 Crossover junction endodeoxyribonuclease RuvC NU955_RS08040 PF00905 Penicillin binding protein transpeptidase domain NU955_RS08060 PF00438 S-adenosylmethionine synthetase, N-terminal domain NU955_RS08060 PF02773 S-adenosylmethionine synthetase, C-terminal domain NU955_RS08060 PF02772 S-adenosylmethionine synthetase, central domain NU955_RS08065 PF02779 Transketolase, pyrimidine binding domain NU955_RS08065 PF02780 Transketolase, C-terminal domain NU955_RS08065 PF00456 Transketolase, thiamine diphosphate binding domain NU955_RS08075 PF04264 YceI-like domain NU955_RS08085 PF09992 Phosphodiester glycosidase NU955_RS08095 PF05958 tRNA (Uracil-5-)-methyltransferase NU955_RS08100 PF04229 GrpB protein NU955_RS08105 PF00171 Aldehyde dehydrogenase family NU955_RS08105 PF01619 Proline dehydrogenase NU955_RS08105 PF14850 DNA-binding domain of Proline dehydrogenase NU955_RS08105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NU955_RS08110 PF01037 Lrp/AsnC ligand binding domain NU955_RS08115 PF00474 Sodium:solute symporter family NU955_RS08120 PF02146 Sir2 family NU955_RS08125 PF01597 Glycine cleavage H-protein NU955_RS08130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NU955_RS08130 PF12833 Helix-turn-helix domain NU955_RS08140 PF00664 ABC transporter transmembrane region NU955_RS08140 PF00005 ABC transporter NU955_RS08145 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NU955_RS08150 PF06912 Protein of unknown function (DUF1275) NU955_RS08155 PF00375 Sodium:dicarboxylate symporter family NU955_RS08170 PF08007 Cupin superfamily protein NU955_RS08175 PF02545 Maf-like protein NU955_RS08185 PF00162 Phosphoglycerate kinase NU955_RS08195 PF01116 Fructose-bisphosphate aldolase class-II NU955_RS08200 PF09312 SurA N-terminal domain NU955_RS08200 PF00639 PPIC-type PPIASE domain NU955_RS08205 PF03968 OstA-like protein NU955_RS08205 PF04453 LPS transport system D NU955_RS08210 PF01636 Phosphotransferase enzyme family NU955_RS08215 PF00483 Nucleotidyl transferase NU955_RS08220 PF02527 rRNA small subunit methyltransferase G NU955_RS08225 PF13614 AAA domain NU955_RS08230 PF17762 HTH domain found in ParB protein NU955_RS08230 PF02195 ParB-like nuclease domain NU955_RS08235 PF01618 MotA/TolQ/ExbB proton channel family NU955_RS08245 PF00664 ABC transporter transmembrane region NU955_RS08245 PF00005 ABC transporter NU955_RS08250 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NU955_RS08255 PF02348 Cytidylyltransferase NU955_RS08260 PF09115 DNA polymerase III, delta subunit, C terminal NU955_RS08270 PF01026 TatD related DNase NU955_RS08285 PF07963 Prokaryotic N-terminal methylation motif NU955_RS08285 PF02501 Type II secretion system (T2SS), protein I NU955_RS08290 PF11612 Type II secretion system (T2SS), protein J NU955_RS08290 PF07963 Prokaryotic N-terminal methylation motif NU955_RS08295 PF03934 Type II secretion system (T2SS), protein K NU955_RS08305 PF03167 Uracil DNA glycosylase superfamily NU955_RS08315 PF14437 MafB19-like deaminase NU955_RS08325 PF02224 Cytidylate kinase NU955_RS08330 PF00575 S1 RNA binding domain NU955_RS08335 PF00216 Bacterial DNA-binding protein NU955_RS08345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NU955_RS08355 PF00743 Flavin-binding monooxygenase-like NU955_RS08365 PF03969 AFG1-like ATPase NU955_RS08370 PF01274 Malate synthase NU955_RS08375 PF02472 Biopolymer transport protein ExbD/TolR NU955_RS08380 PF02472 Biopolymer transport protein ExbD/TolR NU955_RS08385 PF01618 MotA/TolQ/ExbB proton channel family NU955_RS08395 PF07715 TonB-dependent Receptor Plug Domain NU955_RS08395 PF00593 TonB dependent receptor NU955_RS08410 PF01432 Peptidase family M3 NU955_RS08415 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS08420 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS08425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NU955_RS08425 PF00005 ABC transporter NU955_RS08440 PF00459 Inositol monophosphatase family NU955_RS08450 PF01649 Ribosomal protein S20 NU955_RS08455 PF13460 NAD(P)H-binding NU955_RS08460 PF03737 Aldolase/RraA NU955_RS08480 PF02559 CarD-like/TRCF domain NU955_RS08480 PF00270 DEAD/DEAH box helicase NU955_RS08480 PF17757 UvrB interaction domain NU955_RS08480 PF03461 TRCF domain NU955_RS08480 PF00271 Helicase conserved C-terminal domain NU955_RS08490 PF00211 Adenylate and Guanylate cyclase catalytic domain NU955_RS08495 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS08500 PF00012 Hsp70 protein NU955_RS08505 PF00226 DnaJ domain NU955_RS08505 PF07743 HSCB C-terminal oligomerisation domain NU955_RS08510 PF01521 Iron-sulphur cluster biosynthesis NU955_RS08515 PF01592 NifU-like N terminal domain NU955_RS08520 PF00266 Aminotransferase class-V NU955_RS08525 PF02082 Transcriptional regulator NU955_RS08540 PF00216 Bacterial DNA-binding protein NU955_RS08545 PF00639 PPIC-type PPIASE domain NU955_RS08545 PF09312 SurA N-terminal domain NU955_RS08550 PF12852 Cupin NU955_RS08550 PF12833 Helix-turn-helix domain NU955_RS08555 PF00487 Fatty acid desaturase NU955_RS08560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS08560 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS08560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS08570 PF03109 ABC1 family NU955_RS08580 PF04073 Aminoacyl-tRNA editing domain NU955_RS08585 PF04183 IucA / IucC family NU955_RS08585 PF06276 Ferric iron reductase FhuF-like transporter NU955_RS08590 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NU955_RS08595 PF07690 Major Facilitator Superfamily NU955_RS08600 PF06276 Ferric iron reductase FhuF-like transporter NU955_RS08600 PF04183 IucA / IucC family NU955_RS08605 PF06276 Ferric iron reductase FhuF-like transporter NU955_RS08605 PF04183 IucA / IucC family NU955_RS08615 PF03737 Aldolase/RraA NU955_RS08620 PF07715 TonB-dependent Receptor Plug Domain NU955_RS08620 PF00593 TonB dependent receptor NU955_RS08645 PF13419 Haloacid dehalogenase-like hydrolase NU955_RS08655 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NU955_RS08660 PF02277 Phosphoribosyltransferase NU955_RS08665 PF00300 Histidine phosphatase superfamily (branch 1) NU955_RS08675 PF02654 Cobalamin-5-phosphate synthase NU955_RS08680 PF00793 DAHP synthetase I family NU955_RS08685 PF01925 Sulfite exporter TauE/SafE NU955_RS08705 PF07715 TonB-dependent Receptor Plug Domain NU955_RS08705 PF00593 TonB dependent receptor NU955_RS08710 PF02684 Lipid-A-disaccharide synthetase NU955_RS08720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS08725 PF00005 ABC transporter NU955_RS08760 PF01230 HIT domain NU955_RS08790 PF08241 Methyltransferase domain NU955_RS08795 PF00561 alpha/beta hydrolase fold NU955_RS08800 PF01053 Cys/Met metabolism PLP-dependent enzyme NU955_RS08810 PF02575 YbaB/EbfC DNA-binding family NU955_RS08815 PF02132 RecR protein NU955_RS08815 PF13662 Toprim domain NU955_RS08820 PF01612 3'-5' exonuclease NU955_RS08820 PF00570 HRDC domain NU955_RS08840 PF05166 YcgL domain NU955_RS08850 PF00004 ATPase family associated with various cellular activities (AAA) NU955_RS08850 PF17862 AAA+ lid domain NU955_RS08850 PF01434 Peptidase family M41 NU955_RS08860 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS08865 PF05175 Methyltransferase small domain NU955_RS08870 PF01264 Chorismate synthase NU955_RS08875 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS08875 PF08448 PAS fold NU955_RS08890 PF04055 Radical SAM superfamily NU955_RS08895 PF00676 Dehydrogenase E1 component NU955_RS08900 PF02779 Transketolase, pyrimidine binding domain NU955_RS08900 PF02780 Transketolase, C-terminal domain NU955_RS08905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NU955_RS08905 PF00364 Biotin-requiring enzyme NU955_RS08905 PF02817 e3 binding domain NU955_RS08910 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS08910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NU955_RS08915 PF00106 short chain dehydrogenase NU955_RS08920 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS08920 PF00107 Zinc-binding dehydrogenase NU955_RS08925 PF01062 Bestrophin, RFP-TM, chloride channel NU955_RS08930 PF02954 Bacterial regulatory protein, Fis family NU955_RS08930 PF00072 Response regulator receiver domain NU955_RS08930 PF00158 Sigma-54 interaction domain NU955_RS08935 PF00753 Metallo-beta-lactamase superfamily NU955_RS08935 PF04273 Putative phosphatase (DUF442) NU955_RS08950 PF01925 Sulfite exporter TauE/SafE NU955_RS08965 PF06445 GyrI-like small molecule binding domain NU955_RS08965 PF12833 Helix-turn-helix domain NU955_RS08970 PF01638 HxlR-like helix-turn-helix NU955_RS08975 PF02525 Flavodoxin-like fold NU955_RS08985 PF07702 UTRA domain NU955_RS08985 PF00392 Bacterial regulatory proteins, gntR family NU955_RS09000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NU955_RS09005 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS09010 PF00005 ABC transporter NU955_RS09025 PF00083 Sugar (and other) transporter NU955_RS09030 PF07715 TonB-dependent Receptor Plug Domain NU955_RS09030 PF00593 TonB dependent receptor NU955_RS09035 PF10415 Fumarase C C-terminus NU955_RS09035 PF00206 Lyase NU955_RS09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09050 PF03466 LysR substrate binding domain NU955_RS09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09055 PF03466 LysR substrate binding domain NU955_RS09060 PF02803 Thiolase, C-terminal domain NU955_RS09060 PF00108 Thiolase, N-terminal domain NU955_RS09065 PF02667 Short chain fatty acid transporter NU955_RS09070 PF01144 Coenzyme A transferase NU955_RS09075 PF01144 Coenzyme A transferase NU955_RS09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09080 PF03466 LysR substrate binding domain NU955_RS09100 PF06719 AraC-type transcriptional regulator N-terminus NU955_RS09100 PF12833 Helix-turn-helix domain NU955_RS09105 PF07690 Major Facilitator Superfamily NU955_RS09110 PF01738 Dienelactone hydrolase family NU955_RS09125 PF01613 Flavin reductase like domain NU955_RS09135 PF14525 AraC-binding-like domain NU955_RS09135 PF12833 Helix-turn-helix domain NU955_RS09140 PF00970 Oxidoreductase FAD-binding domain NU955_RS09140 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS09140 PF00175 Oxidoreductase NAD-binding domain NU955_RS09145 PF00866 Ring hydroxylating beta subunit NU955_RS09150 PF00355 Rieske [2Fe-2S] domain NU955_RS09150 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NU955_RS09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09155 PF03459 TOBE domain NU955_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS09170 PF03459 TOBE domain NU955_RS09170 PF00005 ABC transporter NU955_RS09175 PF00106 short chain dehydrogenase NU955_RS09180 PF00550 Phosphopantetheine attachment site NU955_RS09180 PF00857 Isochorismatase family NU955_RS09190 PF00149 Calcineurin-like phosphoesterase NU955_RS09195 PF02503 Polyphosphate kinase middle domain NU955_RS09195 PF13090 Polyphosphate kinase C-terminal domain 2 NU955_RS09195 PF17941 Polyphosphate kinase C-terminal domain 1 NU955_RS09195 PF13089 Polyphosphate kinase N-terminal domain NU955_RS09200 PF08042 PqqA family NU955_RS09205 PF12706 Beta-lactamase superfamily domain NU955_RS09210 PF03070 TENA/THI-4/PQQC family NU955_RS09215 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NU955_RS09220 PF04055 Radical SAM superfamily NU955_RS09220 PF13186 Iron-sulfur cluster-binding domain NU955_RS09225 PF01244 Membrane dipeptidase (Peptidase family M19) NU955_RS09240 PF13091 PLD-like domain NU955_RS09255 PF00199 Catalase NU955_RS09265 PF00107 Zinc-binding dehydrogenase NU955_RS09265 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS09275 PF00419 Fimbrial protein NU955_RS09280 PF13954 PapC N-terminal domain NU955_RS09280 PF13953 PapC C-terminal domain NU955_RS09280 PF00577 Outer membrane usher protein NU955_RS09285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NU955_RS09285 PF02753 Pili assembly chaperone PapD, C-terminal domain NU955_RS09290 PF16970 Type-1 fimbrial protein, A NU955_RS09340 PF01266 FAD dependent oxidoreductase NU955_RS09350 PF00743 Flavin-binding monooxygenase-like NU955_RS09355 PF12146 Serine aminopeptidase, S33 NU955_RS09360 PF02321 Outer membrane efflux protein NU955_RS09365 PF00873 AcrB/AcrD/AcrF family NU955_RS09370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS09370 PF00529 HlyD membrane-fusion protein of T1SS NU955_RS09375 PF00486 Transcriptional regulatory protein, C terminal NU955_RS09375 PF00072 Response regulator receiver domain NU955_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS09380 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS09380 PF00672 HAMP domain NU955_RS09380 PF16527 Two-component sensor protein CpxA, periplasmic domain NU955_RS09395 PF12833 Helix-turn-helix domain NU955_RS09395 PF02311 AraC-like ligand binding domain NU955_RS09400 PF12146 Serine aminopeptidase, S33 NU955_RS09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09415 PF03466 LysR substrate binding domain NU955_RS09420 PF12146 Serine aminopeptidase, S33 NU955_RS09450 PF13333 Integrase core domain NU955_RS09450 PF00665 Integrase core domain NU955_RS09450 PF13276 HTH-like domain NU955_RS09465 PF02824 TGS domain NU955_RS09465 PF04607 Region found in RelA / SpoT proteins NU955_RS09465 PF13291 ACT domain NU955_RS09475 PF01975 Survival protein SurE NU955_RS09500 PF07690 Major Facilitator Superfamily NU955_RS09505 PF13533 Biotin-lipoyl like NU955_RS09510 PF13737 Transposase DDE domain NU955_RS09530 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NU955_RS09555 PF00005 ABC transporter NU955_RS09560 PF01032 FecCD transport family NU955_RS09575 PF00107 Zinc-binding dehydrogenase NU955_RS09575 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS09580 PF12833 Helix-turn-helix domain NU955_RS09580 PF06719 AraC-type transcriptional regulator N-terminus NU955_RS09585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NU955_RS09585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NU955_RS09590 PF07690 Major Facilitator Superfamily NU955_RS09595 PF01370 NAD dependent epimerase/dehydratase family NU955_RS09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09600 PF03466 LysR substrate binding domain NU955_RS09610 PF00920 Dehydratase family NU955_RS09615 PF00171 Aldehyde dehydrogenase family NU955_RS09630 PF13533 Biotin-lipoyl like NU955_RS09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09645 PF03466 LysR substrate binding domain NU955_RS09655 PF08450 SMP-30/Gluconolactonase/LRE-like region NU955_RS09660 PF07702 UTRA domain NU955_RS09660 PF00392 Bacterial regulatory proteins, gntR family NU955_RS09670 PF04909 Amidohydrolase NU955_RS09675 PF07690 Major Facilitator Superfamily NU955_RS09680 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) NU955_RS09730 PF07687 Peptidase dimerisation domain NU955_RS09730 PF01546 Peptidase family M20/M25/M40 NU955_RS09740 PF00999 Sodium/hydrogen exchanger family NU955_RS09740 PF02254 TrkA-N domain NU955_RS09745 PF07995 Glucose / Sorbosone dehydrogenase NU955_RS09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09755 PF03466 LysR substrate binding domain NU955_RS09760 PF00857 Isochorismatase family NU955_RS09770 PF08359 YsiA-like protein, C-terminal region NU955_RS09770 PF00440 Bacterial regulatory proteins, tetR family NU955_RS09775 PF12706 Beta-lactamase superfamily domain NU955_RS09785 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS09795 PF00376 MerR family regulatory protein NU955_RS09795 PF09278 MerR, DNA binding NU955_RS09800 PF01872 RibD C-terminal domain NU955_RS09805 PF00106 short chain dehydrogenase NU955_RS09810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NU955_RS09810 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS09815 PF00561 alpha/beta hydrolase fold NU955_RS09825 PF00171 Aldehyde dehydrogenase family NU955_RS09835 PF07690 Major Facilitator Superfamily NU955_RS09840 PF00920 Dehydratase family NU955_RS09845 PF07729 FCD domain NU955_RS09845 PF00392 Bacterial regulatory proteins, gntR family NU955_RS09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS09855 PF03466 LysR substrate binding domain NU955_RS09860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NU955_RS09860 PF13378 Enolase C-terminal domain-like NU955_RS09865 PF02426 Muconolactone delta-isomerase NU955_RS09870 PF04444 Catechol dioxygenase N terminus NU955_RS09870 PF00775 Dioxygenase NU955_RS09875 PF01144 Coenzyme A transferase NU955_RS09880 PF01144 Coenzyme A transferase NU955_RS09885 PF00108 Thiolase, N-terminal domain NU955_RS09885 PF02803 Thiolase, C-terminal domain NU955_RS09890 PF12146 Serine aminopeptidase, S33 NU955_RS09895 PF01804 Penicillin amidase NU955_RS09900 PF00171 Aldehyde dehydrogenase family NU955_RS09910 PF07833 Copper amine oxidase N-terminal domain NU955_RS09910 PF01179 Copper amine oxidase, enzyme domain NU955_RS09910 PF02727 Copper amine oxidase, N2 domain NU955_RS09910 PF02728 Copper amine oxidase, N3 domain NU955_RS09915 PF12833 Helix-turn-helix domain NU955_RS09915 PF02311 AraC-like ligand binding domain NU955_RS09920 PF01613 Flavin reductase like domain NU955_RS09925 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS09925 PF00175 Oxidoreductase NAD-binding domain NU955_RS09940 PF00355 Rieske [2Fe-2S] domain NU955_RS09940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NU955_RS09955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS09960 PF01425 Amidase NU955_RS09970 PF07690 Major Facilitator Superfamily NU955_RS09980 PF00106 short chain dehydrogenase NU955_RS09995 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS09995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS09995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS10000 PF03466 LysR substrate binding domain NU955_RS10005 PF09339 IclR helix-turn-helix domain NU955_RS10005 PF01614 Bacterial transcriptional regulator NU955_RS10010 PF00753 Metallo-beta-lactamase superfamily NU955_RS10020 PF04143 Sulphur transport NU955_RS10030 PF13360 PQQ-like domain NU955_RS10030 PF01011 PQQ enzyme repeat NU955_RS10035 PF04966 Carbohydrate-selective porin, OprB family NU955_RS10040 PF05048 Periplasmic copper-binding protein (NosD) NU955_RS10045 PF01487 Type I 3-dehydroquinase NU955_RS10050 PF00775 Dioxygenase NU955_RS10055 PF00775 Dioxygenase NU955_RS10055 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NU955_RS10060 PF02627 Carboxymuconolactone decarboxylase family NU955_RS10065 PF07690 Major Facilitator Superfamily NU955_RS10070 PF00561 alpha/beta hydrolase fold NU955_RS10075 PF00206 Lyase NU955_RS10075 PF10397 Adenylosuccinate lyase C-terminus NU955_RS10080 PF00108 Thiolase, N-terminal domain NU955_RS10080 PF02803 Thiolase, C-terminal domain NU955_RS10085 PF01144 Coenzyme A transferase NU955_RS10090 PF01144 Coenzyme A transferase NU955_RS10095 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NU955_RS10100 PF04977 Septum formation initiator NU955_RS10105 PF04239 Protein of unknown function (DUF421) NU955_RS10110 PF00113 Enolase, C-terminal TIM barrel domain NU955_RS10110 PF03952 Enolase, N-terminal domain NU955_RS10115 PF00793 DAHP synthetase I family NU955_RS10120 PF06418 CTP synthase N-terminus NU955_RS10120 PF00117 Glutamine amidotransferase class-I NU955_RS10150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NU955_RS10150 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS10165 PF00793 DAHP synthetase I family NU955_RS10170 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NU955_RS10175 PF00004 ATPase family associated with various cellular activities (AAA) NU955_RS10175 PF10431 C-terminal, D2-small domain, of ClpB protein NU955_RS10175 PF02861 Clp amino terminal domain, pathogenicity island component NU955_RS10175 PF17871 AAA lid domain NU955_RS10175 PF07724 AAA domain (Cdc48 subfamily) NU955_RS10180 PF02617 ATP-dependent Clp protease adaptor protein ClpS NU955_RS10190 PF02774 Semialdehyde dehydrogenase, dimerisation domain NU955_RS10190 PF01118 Semialdehyde dehydrogenase, NAD binding domain NU955_RS10205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NU955_RS10210 PF00585 C-terminal regulatory domain of Threonine dehydratase NU955_RS10210 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS10215 PF02254 TrkA-N domain NU955_RS10215 PF02080 TrkA-C domain NU955_RS10220 PF02386 Cation transport protein NU955_RS10225 PF02253 Phospholipase A1 NU955_RS10230 PF05193 Peptidase M16 inactive domain NU955_RS10230 PF00675 Insulinase (Peptidase family M16) NU955_RS10230 PF08367 Peptidase M16C associated NU955_RS10235 PF07715 TonB-dependent Receptor Plug Domain NU955_RS10235 PF00593 TonB dependent receptor NU955_RS10240 PF00294 pfkB family carbohydrate kinase NU955_RS10250 PF07290 Protein of unknown function (DUF1449) NU955_RS10260 PF01654 Cytochrome bd terminal oxidase subunit I NU955_RS10265 PF02322 Cytochrome bd terminal oxidase subunit II NU955_RS10270 PF08173 Membrane bound YbgT-like protein NU955_RS10285 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NU955_RS10295 PF00448 SRP54-type protein, GTPase domain NU955_RS10295 PF02881 SRP54-type protein, helical bundle domain NU955_RS10320 PF00571 CBS domain NU955_RS10320 PF00478 IMP dehydrogenase / GMP reductase domain NU955_RS10325 PF00202 Aminotransferase class-III NU955_RS10330 PF00462 Glutaredoxin NU955_RS10340 PF03466 LysR substrate binding domain NU955_RS10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS10345 PF00557 Metallopeptidase family M24 NU955_RS10350 PF05525 Branched-chain amino acid transport protein NU955_RS10375 PF00381 PTS HPr component phosphorylation site NU955_RS10375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NU955_RS10375 PF02896 PEP-utilising enzyme, TIM barrel domain NU955_RS10375 PF00391 PEP-utilising enzyme, mobile domain NU955_RS10375 PF05524 PEP-utilising enzyme, N-terminal NU955_RS10380 PF00294 pfkB family carbohydrate kinase NU955_RS10385 PF02378 Phosphotransferase system, EIIC NU955_RS10385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NU955_RS10400 PF03707 Bacterial signalling protein N terminal repeat NU955_RS10400 PF00563 EAL domain NU955_RS10400 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS10410 PF07995 Glucose / Sorbosone dehydrogenase NU955_RS10415 PF02586 SOS response associated peptidase (SRAP) NU955_RS10420 PF01740 STAS domain NU955_RS10420 PF00916 Sulfate permease family NU955_RS10425 PF05922 Peptidase inhibitor I9 NU955_RS10425 PF00082 Subtilase family NU955_RS10440 PF00324 Amino acid permease NU955_RS10445 PF00266 Aminotransferase class-V NU955_RS10450 PF01037 Lrp/AsnC ligand binding domain NU955_RS10475 PF13419 Haloacid dehalogenase-like hydrolase NU955_RS10480 PF01479 S4 domain NU955_RS10485 PF00154 recA bacterial DNA recombination protein NU955_RS10490 PF02631 RecX family NU955_RS10505 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS10505 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NU955_RS10510 PF07977 FabA-like domain NU955_RS10515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NU955_RS10515 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS10525 PF07244 Surface antigen variable number repeat NU955_RS10525 PF01103 Surface antigen NU955_RS10530 PF02163 Peptidase family M50 NU955_RS10530 PF17820 PDZ domain NU955_RS10530 PF13180 PDZ domain NU955_RS10535 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NU955_RS10535 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NU955_RS10535 PF13288 DXP reductoisomerase C-terminal domain NU955_RS10545 PF01255 Putative undecaprenyl diphosphate synthase NU955_RS10550 PF01765 Ribosome recycling factor NU955_RS10555 PF00696 Amino acid kinase family NU955_RS10560 PF04055 Radical SAM superfamily NU955_RS10560 PF18693 TRAM domain NU955_RS10560 PF00919 Uncharacterized protein family UPF0004 NU955_RS10565 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS10565 PF00989 PAS fold NU955_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS10570 PF02954 Bacterial regulatory protein, Fis family NU955_RS10570 PF00072 Response regulator receiver domain NU955_RS10570 PF00158 Sigma-54 interaction domain NU955_RS10575 PF00440 Bacterial regulatory proteins, tetR family NU955_RS10580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NU955_RS10580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NU955_RS10590 PF02542 YgbB family NU955_RS10600 PF01266 FAD dependent oxidoreductase NU955_RS10620 PF10415 Fumarase C C-terminus NU955_RS10620 PF00206 Lyase NU955_RS10625 PF16363 GDP-mannose 4,6 dehydratase NU955_RS10630 PF02635 DsrE/DsrF-like family NU955_RS10650 PF00892 EamA-like transporter family NU955_RS10655 PF00392 Bacterial regulatory proteins, gntR family NU955_RS10655 PF00155 Aminotransferase class I and II NU955_RS10660 PF01638 HxlR-like helix-turn-helix NU955_RS10665 PF00994 Probable molybdopterin binding domain NU955_RS10665 PF03454 MoeA C-terminal region (domain IV) NU955_RS10665 PF03453 MoeA N-terminal region (domain I and II) NU955_RS10670 PF01967 MoaC family NU955_RS10670 PF00994 Probable molybdopterin binding domain NU955_RS10675 PF02391 MoaE protein NU955_RS10685 PF06463 Molybdenum Cofactor Synthesis C NU955_RS10685 PF04055 Radical SAM superfamily NU955_RS10690 PF00384 Molybdopterin oxidoreductase NU955_RS10690 PF01568 Molydopterin dinucleotide binding domain NU955_RS10690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NU955_RS10695 PF12804 MobA-like NTP transferase domain NU955_RS10700 PF04324 BFD-like [2Fe-2S] binding domain NU955_RS10700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NU955_RS10700 PF00384 Molybdopterin oxidoreductase NU955_RS10700 PF01568 Molydopterin dinucleotide binding domain NU955_RS10705 PF18267 Rubredoxin NAD+ reductase C-terminal domain NU955_RS10705 PF04324 BFD-like [2Fe-2S] binding domain NU955_RS10705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NU955_RS10705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NU955_RS10705 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS10710 PF18267 Rubredoxin NAD+ reductase C-terminal domain NU955_RS10710 PF13806 Rieske-like [2Fe-2S] domain NU955_RS10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS10710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NU955_RS10710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NU955_RS10710 PF04324 BFD-like [2Fe-2S] binding domain NU955_RS10720 PF00072 Response regulator receiver domain NU955_RS10720 PF00486 Transcriptional regulatory protein, C terminal NU955_RS10725 PF00005 ABC transporter NU955_RS10735 PF11799 impB/mucB/samB family C-terminal domain NU955_RS10735 PF00817 impB/mucB/samB family NU955_RS10735 PF13438 Domain of unknown function (DUF4113) NU955_RS10740 PF01220 Dehydroquinase class II NU955_RS10745 PF00364 Biotin-requiring enzyme NU955_RS10750 PF02785 Biotin carboxylase C-terminal domain NU955_RS10750 PF00289 Biotin carboxylase, N-terminal domain NU955_RS10750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NU955_RS10760 PF12832 MFS_1 like family NU955_RS10780 PF01645 Conserved region in glutamate synthase NU955_RS10795 PF01565 FAD binding domain NU955_RS10795 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NU955_RS10800 PF01451 Low molecular weight phosphotyrosine protein phosphatase NU955_RS10810 PF00465 Iron-containing alcohol dehydrogenase NU955_RS10815 PF03061 Thioesterase superfamily NU955_RS10820 PF05506 Domain of unknown function (DUF756) NU955_RS10820 PF04185 Phosphoesterase family NU955_RS10825 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NU955_RS10825 PF12169 DNA polymerase III subunits gamma and tau domain III NU955_RS10825 PF12170 DNA polymerase III tau subunit V interacting with alpha NU955_RS10840 PF07690 Major Facilitator Superfamily NU955_RS10850 PF00144 Beta-lactamase NU955_RS10855 PF01575 MaoC like domain NU955_RS10865 PF02803 Thiolase, C-terminal domain NU955_RS10865 PF00108 Thiolase, N-terminal domain NU955_RS10880 PF00923 Transaldolase/Fructose-6-phosphate aldolase NU955_RS10885 PF01810 LysE type translocator NU955_RS10890 PF01037 Lrp/AsnC ligand binding domain NU955_RS10895 PF03594 Benzoate membrane transport protein NU955_RS10900 PF02308 MgtC family NU955_RS10905 PF00689 Cation transporting ATPase, C-terminus NU955_RS10905 PF00690 Cation transporter/ATPase, N-terminus NU955_RS10930 PF00582 Universal stress protein family NU955_RS10935 PF00005 ABC transporter NU955_RS10935 PF12848 ABC transporter NU955_RS10955 PF00593 TonB dependent receptor NU955_RS10955 PF07715 TonB-dependent Receptor Plug Domain NU955_RS10985 PF00924 Mechanosensitive ion channel NU955_RS10990 PF07715 TonB-dependent Receptor Plug Domain NU955_RS10990 PF00593 TonB dependent receptor NU955_RS10995 PF00440 Bacterial regulatory proteins, tetR family NU955_RS11005 PF13333 Integrase core domain NU955_RS11005 PF13276 HTH-like domain NU955_RS11005 PF00665 Integrase core domain NU955_RS11015 PF01037 Lrp/AsnC ligand binding domain NU955_RS11020 PF01817 Chorismate mutase type II NU955_RS11030 PF00106 short chain dehydrogenase NU955_RS11045 PF13954 PapC N-terminal domain NU955_RS11045 PF13953 PapC C-terminal domain NU955_RS11045 PF00577 Outer membrane usher protein NU955_RS11060 PF01433 Peptidase family M1 domain NU955_RS11060 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NU955_RS11060 PF11940 Domain of unknown function (DUF3458) Ig-like fold NU955_RS11075 PF02110 Hydroxyethylthiazole kinase family NU955_RS11085 PF05970 PIF1-like helicase NU955_RS11085 PF14493 Helix-turn-helix domain NU955_RS11090 PF00465 Iron-containing alcohol dehydrogenase NU955_RS11105 PF00171 Aldehyde dehydrogenase family NU955_RS11110 PF13520 Amino acid permease NU955_RS11115 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NU955_RS11120 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NU955_RS11125 PF02540 NAD synthase NU955_RS11125 PF00117 Glutamine amidotransferase class-I NU955_RS11125 PF00958 GMP synthase C terminal domain NU955_RS11130 PF00749 tRNA synthetases class I (E and Q), catalytic domain NU955_RS11130 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NU955_RS11135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NU955_RS11140 PF00149 Calcineurin-like phosphoesterase NU955_RS11150 PF00881 Nitroreductase family NU955_RS11160 PF17209 Hfq protein NU955_RS11170 PF08676 MutL C terminal dimerisation domain NU955_RS11170 PF01119 DNA mismatch repair protein, C-terminal domain NU955_RS11175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NU955_RS11180 PF00849 RNA pseudouridylate synthase NU955_RS11180 PF01479 S4 domain NU955_RS11195 PF00849 RNA pseudouridylate synthase NU955_RS11195 PF01479 S4 domain NU955_RS11205 PF04284 Protein of unknown function (DUF441) NU955_RS11210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS11210 PF03466 LysR substrate binding domain NU955_RS11225 PF07690 Major Facilitator Superfamily NU955_RS11230 PF00027 Cyclic nucleotide-binding domain NU955_RS11230 PF00520 Ion transport protein NU955_RS11240 PF06434 Aconitate hydratase 2 N-terminus NU955_RS11240 PF11791 Aconitate B N-terminal domain NU955_RS11240 PF00330 Aconitase family (aconitate hydratase) NU955_RS11255 PF01103 Surface antigen NU955_RS11255 PF07244 Surface antigen variable number repeat NU955_RS11255 PF17243 POTRA domain TamA domain 1 NU955_RS11260 PF07690 Major Facilitator Superfamily NU955_RS11265 PF03232 Ubiquinone biosynthesis protein COQ7 NU955_RS11275 PF00120 Glutamine synthetase, catalytic domain NU955_RS11280 PF00072 Response regulator receiver domain NU955_RS11280 PF00486 Transcriptional regulatory protein, C terminal NU955_RS11285 PF13493 Domain of unknown function (DUF4118) NU955_RS11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS11285 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS11285 PF02702 Osmosensitive K+ channel His kinase sensor domain NU955_RS11290 PF02669 K+-transporting ATPase, c chain NU955_RS11300 PF03814 Potassium-transporting ATPase A subunit NU955_RS11315 PF03109 ABC1 family NU955_RS11320 PF00899 ThiF family NU955_RS11325 PF01613 Flavin reductase like domain NU955_RS11330 PF13193 AMP-binding enzyme C-terminal domain NU955_RS11330 PF00501 AMP-binding enzyme NU955_RS11335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS11335 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS11335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS11340 PF00106 short chain dehydrogenase NU955_RS11345 PF12833 Helix-turn-helix domain NU955_RS11350 PF17827 PrmC N-terminal domain NU955_RS11350 PF13847 Methyltransferase domain NU955_RS11355 PF03462 PCRF domain NU955_RS11355 PF00472 RF-1 domain NU955_RS11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS11365 PF03466 LysR substrate binding domain NU955_RS11380 PF00296 Luciferase-like monooxygenase NU955_RS11390 PF13994 PgaD-like protein NU955_RS11395 PF00535 Glycosyl transferase family 2 NU955_RS11400 PF01522 Polysaccharide deacetylase NU955_RS11400 PF14883 Hypothetical glycosyl hydrolase family 13 NU955_RS11410 PF03618 Kinase/pyrophosphorylase NU955_RS11415 PF02896 PEP-utilising enzyme, TIM barrel domain NU955_RS11415 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NU955_RS11415 PF00391 PEP-utilising enzyme, mobile domain NU955_RS11425 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NU955_RS11425 PF06481 COX Aromatic Rich Motif NU955_RS11430 PF00115 Cytochrome C and Quinol oxidase polypeptide I NU955_RS11435 PF00510 Cytochrome c oxidase subunit III NU955_RS11440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NU955_RS11445 PF01040 UbiA prenyltransferase family NU955_RS11450 PF01250 Ribosomal protein S6 NU955_RS11455 PF01084 Ribosomal protein S18 NU955_RS11460 PF03948 Ribosomal protein L9, C-terminal domain NU955_RS11460 PF01281 Ribosomal protein L9, N-terminal domain NU955_RS11465 PF00772 DnaB-like helicase N terminal domain NU955_RS11465 PF03796 DnaB-like helicase C terminal domain NU955_RS11470 PF01168 Alanine racemase, N-terminal domain NU955_RS11470 PF00842 Alanine racemase, C-terminal domain NU955_RS11480 PF08379 Bacterial transglutaminase-like N-terminal region NU955_RS11480 PF01841 Transglutaminase-like superfamily NU955_RS11490 PF14403 Circularly permuted ATP-grasp type 2 NU955_RS11500 PF13932 GidA associated domain NU955_RS11500 PF01134 Glucose inhibited division protein A NU955_RS11520 PF02954 Bacterial regulatory protein, Fis family NU955_RS11525 PF02142 MGS-like domain NU955_RS11525 PF01808 AICARFT/IMPCHase bienzyme NU955_RS11530 PF02844 Phosphoribosylglycinamide synthetase, N domain NU955_RS11530 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NU955_RS11530 PF02843 Phosphoribosylglycinamide synthetase, C domain NU955_RS11535 PF03180 NLPA lipoprotein NU955_RS11540 PF09383 NIL domain NU955_RS11540 PF00005 ABC transporter NU955_RS11545 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS11550 PF16123 Hydroxyacylglutathione hydrolase C-terminus NU955_RS11550 PF00753 Metallo-beta-lactamase superfamily NU955_RS11560 PF00375 Sodium:dicarboxylate symporter family NU955_RS11580 PF07995 Glucose / Sorbosone dehydrogenase NU955_RS11590 PF01177 Asp/Glu/Hydantoin racemase NU955_RS11610 PF00486 Transcriptional regulatory protein, C terminal NU955_RS11610 PF00072 Response regulator receiver domain NU955_RS11615 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS11615 PF08521 Two-component sensor kinase N-terminal NU955_RS11655 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS11655 PF00672 HAMP domain NU955_RS11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS11660 PF00486 Transcriptional regulatory protein, C terminal NU955_RS11660 PF00072 Response regulator receiver domain NU955_RS11670 PF00576 HIUase/Transthyretin family NU955_RS11680 PF02470 MlaD protein NU955_RS11685 PF04403 Paraquat-inducible protein A NU955_RS11710 PF00665 Integrase core domain NU955_RS11710 PF13333 Integrase core domain NU955_RS11710 PF13276 HTH-like domain NU955_RS11715 PF00665 Integrase core domain NU955_RS11715 PF13333 Integrase core domain NU955_RS11715 PF13276 HTH-like domain NU955_RS11730 PF00293 NUDIX domain NU955_RS11735 PF08946 Osmosensory transporter coiled coil NU955_RS11735 PF00083 Sugar (and other) transporter NU955_RS11785 PF00392 Bacterial regulatory proteins, gntR family NU955_RS11785 PF07729 FCD domain NU955_RS11795 PF03616 Sodium/glutamate symporter NU955_RS11800 PF00561 alpha/beta hydrolase fold NU955_RS11825 PF04076 Bacterial OB fold (BOF) protein NU955_RS11855 PF00324 Amino acid permease NU955_RS11860 PF00171 Aldehyde dehydrogenase family NU955_RS11865 PF00202 Aminotransferase class-III NU955_RS11870 PF03466 LysR substrate binding domain NU955_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS11895 PF08479 POTRA domain, ShlB-type NU955_RS11895 PF17287 POTRA domain NU955_RS11895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NU955_RS11920 PF00069 Protein kinase domain NU955_RS11940 PF00814 Glycoprotease family NU955_RS11945 PF01165 Ribosomal protein S21 NU955_RS11950 PF09424 Yqey-like protein NU955_RS11955 PF01435 Peptidase family M48 NU955_RS11960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NU955_RS11960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NU955_RS11975 PF00156 Phosphoribosyl transferase domain NU955_RS11980 PF02674 Colicin V production protein NU955_RS11985 PF01180 Dihydroorotate dehydrogenase NU955_RS12005 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NU955_RS12005 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NU955_RS12010 PF00881 Nitroreductase family NU955_RS12020 PF00270 DEAD/DEAH box helicase NU955_RS12020 PF00271 Helicase conserved C-terminal domain NU955_RS12025 PF00313 'Cold-shock' DNA-binding domain NU955_RS12040 PF04545 Sigma-70, region 4 NU955_RS12040 PF04542 Sigma-70 region 2 NU955_RS12040 PF00140 Sigma-70 factor, region 1.2 NU955_RS12045 PF04241 Protein of unknown function (DUF423) NU955_RS12055 PF05690 Thiazole biosynthesis protein ThiG NU955_RS12065 PF03883 Peroxide stress protein YaaA NU955_RS12075 PF00753 Metallo-beta-lactamase superfamily NU955_RS12080 PF07687 Peptidase dimerisation domain NU955_RS12080 PF01546 Peptidase family M20/M25/M40 NU955_RS12090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NU955_RS12095 PF00800 Prephenate dehydratase NU955_RS12095 PF01817 Chorismate mutase type II NU955_RS12095 PF01842 ACT domain NU955_RS12105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS12105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS12105 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS12110 PF00375 Sodium:dicarboxylate symporter family NU955_RS12115 PF02885 Glycosyl transferase family, helical bundle domain NU955_RS12115 PF00591 Glycosyl transferase family, a/b domain NU955_RS12120 PF07023 Protein of unknown function (DUF1315) NU955_RS12125 PF01513 ATP-NAD kinase NU955_RS12130 PF14814 Bifunctional transglycosylase second domain NU955_RS12130 PF00905 Penicillin binding protein transpeptidase domain NU955_RS12130 PF00912 Transglycosylase NU955_RS12140 PF00293 NUDIX domain NU955_RS12150 PF08521 Two-component sensor kinase N-terminal NU955_RS12150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS12150 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS12155 PF00486 Transcriptional regulatory protein, C terminal NU955_RS12155 PF00072 Response regulator receiver domain NU955_RS12165 PF00437 Type II/IV secretion system protein NU955_RS12165 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NU955_RS12175 PF18389 TrmO C-terminal domain NU955_RS12175 PF01980 tRNA-methyltransferase O NU955_RS12180 PF00970 Oxidoreductase FAD-binding domain NU955_RS12180 PF00175 Oxidoreductase NAD-binding domain NU955_RS12185 PF02567 Phenazine biosynthesis-like protein NU955_RS12195 PF01136 Peptidase family U32 NU955_RS12195 PF16325 Peptidase family U32 C-terminal domain NU955_RS12200 PF00037 4Fe-4S binding domain NU955_RS12205 PF00893 Small Multidrug Resistance protein NU955_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS12220 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS12225 PF00497 Bacterial extracellular solute-binding proteins, family 3 NU955_RS12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS12230 PF03466 LysR substrate binding domain NU955_RS12235 PF13533 Biotin-lipoyl like NU955_RS12240 PF00873 AcrB/AcrD/AcrF family NU955_RS12245 PF02321 Outer membrane efflux protein NU955_RS12250 PF00464 Serine hydroxymethyltransferase NU955_RS12280 PF00005 ABC transporter NU955_RS12285 PF01061 ABC-2 type transporter NU955_RS12290 PF14489 QueF-like protein NU955_RS12290 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NU955_RS12300 PF01098 Cell cycle protein NU955_RS12305 PF13406 Transglycosylase SLT domain NU955_RS12310 PF03330 Lytic transglycolase NU955_RS12310 PF05036 Sporulation related domain NU955_RS12330 PF12833 Helix-turn-helix domain NU955_RS12340 PF00889 Elongation factor TS NU955_RS12345 PF00318 Ribosomal protein S2 NU955_RS12350 PF00557 Metallopeptidase family M24 NU955_RS12360 PF07690 Major Facilitator Superfamily NU955_RS12370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NU955_RS12370 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS12375 PF04055 Radical SAM superfamily NU955_RS12380 PF09317 Domain of unknown function (DUF1974) NU955_RS12380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS12380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS12395 PF05221 S-adenosyl-L-homocysteine hydrolase NU955_RS12395 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NU955_RS12400 PF02219 Methylenetetrahydrofolate reductase NU955_RS12405 PF04452 RNA methyltransferase NU955_RS12410 PF00563 EAL domain NU955_RS12410 PF03707 Bacterial signalling protein N terminal repeat NU955_RS12410 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS12415 PF03949 Malic enzyme, NAD binding domain NU955_RS12415 PF01515 Phosphate acetyl/butaryl transferase NU955_RS12415 PF00390 Malic enzyme, N-terminal domain NU955_RS12420 PF01743 Poly A polymerase head domain NU955_RS12420 PF12627 Probable RNA and SrmB- binding site of polymerase A NU955_RS12425 PF13180 PDZ domain NU955_RS12430 PF01784 NIF3 (NGG1p interacting factor 3) NU955_RS12435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NU955_RS12435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NU955_RS12470 PF01040 UbiA prenyltransferase family NU955_RS12475 PF04345 Chorismate lyase NU955_RS12480 PF00120 Glutamine synthetase, catalytic domain NU955_RS12480 PF03951 Glutamine synthetase, beta-Grasp domain NU955_RS12485 PF00854 POT family NU955_RS12495 PF00117 Glutamine amidotransferase class-I NU955_RS12500 PF11838 ERAP1-like C-terminal domain NU955_RS12500 PF01433 Peptidase family M1 domain NU955_RS12505 PF00593 TonB dependent receptor NU955_RS12505 PF07715 TonB-dependent Receptor Plug Domain NU955_RS12510 PF00591 Glycosyl transferase family, a/b domain NU955_RS12510 PF02885 Glycosyl transferase family, helical bundle domain NU955_RS12515 PF00218 Indole-3-glycerol phosphate synthase NU955_RS12530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NU955_RS12530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NU955_RS12535 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS12535 PF01799 [2Fe-2S] binding domain NU955_RS12540 PF01227 GTP cyclohydrolase I NU955_RS12545 PF00144 Beta-lactamase NU955_RS12560 PF05675 Protein of unknown function (DUF817) NU955_RS12565 PF01208 Uroporphyrinogen decarboxylase (URO-D) NU955_RS12575 PF00425 chorismate binding enzyme NU955_RS12580 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NU955_RS12580 PF01648 4'-phosphopantetheinyl transferase superfamily NU955_RS12585 PF00975 Thioesterase domain NU955_RS12590 PF00005 ABC transporter NU955_RS12595 PF00664 ABC transporter transmembrane region NU955_RS12595 PF00005 ABC transporter NU955_RS12605 PF00282 Pyridoxal-dependent decarboxylase conserved domain NU955_RS12610 PF00857 Isochorismatase family NU955_RS12610 PF00550 Phosphopantetheine attachment site NU955_RS12615 PF00501 AMP-binding enzyme NU955_RS12615 PF13193 AMP-binding enzyme C-terminal domain NU955_RS12620 PF00668 Condensation domain NU955_RS12620 PF00550 Phosphopantetheine attachment site NU955_RS12620 PF00501 AMP-binding enzyme NU955_RS12625 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NU955_RS12630 PF07715 TonB-dependent Receptor Plug Domain NU955_RS12630 PF00593 TonB dependent receptor NU955_RS12635 PF01497 Periplasmic binding protein NU955_RS12640 PF00005 ABC transporter NU955_RS12645 PF01032 FecCD transport family NU955_RS12650 PF01032 FecCD transport family NU955_RS12660 PF00668 Condensation domain NU955_RS12660 PF00975 Thioesterase domain NU955_RS12660 PF00550 Phosphopantetheine attachment site NU955_RS12660 PF00501 AMP-binding enzyme NU955_RS12660 PF13193 AMP-binding enzyme C-terminal domain NU955_RS12665 PF00501 AMP-binding enzyme NU955_RS12665 PF13193 AMP-binding enzyme C-terminal domain NU955_RS12665 PF00668 Condensation domain NU955_RS12665 PF00550 Phosphopantetheine attachment site NU955_RS12675 PF08348 YheO-like PAS domain NU955_RS12675 PF13309 HTH domain NU955_RS12680 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS12685 PF02678 Pirin NU955_RS12685 PF17954 Quercetinase C-terminal cupin domain NU955_RS12705 PF13333 Integrase core domain NU955_RS12705 PF00665 Integrase core domain NU955_RS12705 PF13276 HTH-like domain NU955_RS12740 PF04328 Selenoprotein, putative NU955_RS12745 PF13722 5TM C-terminal transporter carbon starvation CstA NU955_RS12745 PF02554 Carbon starvation protein CstA NU955_RS12750 PF01132 Elongation factor P (EF-P) OB domain NU955_RS12750 PF08207 Elongation factor P (EF-P) KOW-like domain NU955_RS12750 PF09285 Elongation factor P, C-terminal NU955_RS12755 PF04055 Radical SAM superfamily NU955_RS12765 PF12792 CSS motif domain associated with EAL NU955_RS12765 PF00563 EAL domain NU955_RS12770 PF01197 Ribosomal protein L31 NU955_RS12775 PF13593 SBF-like CPA transporter family (DUF4137) NU955_RS12780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NU955_RS12785 PF07690 Major Facilitator Superfamily NU955_RS12790 PF13654 AAA domain NU955_RS12790 PF05362 Lon protease (S16) C-terminal proteolytic domain NU955_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS12795 PF03466 LysR substrate binding domain NU955_RS12800 PF01476 LysM domain NU955_RS12800 PF01551 Peptidase family M23 NU955_RS12805 PF01975 Survival protein SurE NU955_RS12820 PF07943 Penicillin-binding protein 5, C-terminal domain NU955_RS12820 PF00768 D-alanyl-D-alanine carboxypeptidase NU955_RS12825 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS12830 PF13344 Haloacid dehalogenase-like hydrolase NU955_RS12830 PF00293 NUDIX domain NU955_RS12840 PF04356 Protein of unknown function (DUF489) NU955_RS12845 PF08328 Adenylosuccinate lyase C-terminal NU955_RS12845 PF00206 Lyase NU955_RS12860 PF01343 Peptidase family S49 NU955_RS12860 PF08496 Peptidase family S49 N-terminal NU955_RS12865 PF00005 ABC transporter NU955_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS12875 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS12880 PF12849 PBP superfamily domain NU955_RS12885 PF00324 Amino acid permease NU955_RS12890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NU955_RS12890 PF00205 Thiamine pyrophosphate enzyme, central domain NU955_RS12890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NU955_RS12895 PF01037 Lrp/AsnC ligand binding domain NU955_RS12900 PF00171 Aldehyde dehydrogenase family NU955_RS12905 PF00282 Pyridoxal-dependent decarboxylase conserved domain NU955_RS12910 PF00202 Aminotransferase class-III NU955_RS12930 PF00487 Fatty acid desaturase NU955_RS12935 PF00970 Oxidoreductase FAD-binding domain NU955_RS12935 PF00111 2Fe-2S iron-sulfur cluster binding domain NU955_RS12935 PF00175 Oxidoreductase NAD-binding domain NU955_RS12940 PF00440 Bacterial regulatory proteins, tetR family NU955_RS12950 PF12137 RNA polymerase recycling family C-terminal NU955_RS12950 PF00176 SNF2 family N-terminal domain NU955_RS12950 PF18339 RapA N-terminal Tudor like domain 1 NU955_RS12950 PF18337 RapA N-terminal Tudor like domain NU955_RS12950 PF00271 Helicase conserved C-terminal domain NU955_RS12955 PF00849 RNA pseudouridylate synthase NU955_RS12965 PF00202 Aminotransferase class-III NU955_RS12970 PF02581 Thiamine monophosphate synthase NU955_RS12995 PF05193 Peptidase M16 inactive domain NU955_RS12995 PF00675 Insulinase (Peptidase family M16) NU955_RS13000 PF02567 Phenazine biosynthesis-like protein NU955_RS13005 PF00375 Sodium:dicarboxylate symporter family NU955_RS13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS13010 PF03466 LysR substrate binding domain NU955_RS13015 PF06779 Uncharacterised MFS-type transporter YbfB NU955_RS13035 PF00180 Isocitrate/isopropylmalate dehydrogenase NU955_RS13040 PF00849 RNA pseudouridylate synthase NU955_RS13045 PF03971 Monomeric isocitrate dehydrogenase NU955_RS13055 PF07943 Penicillin-binding protein 5, C-terminal domain NU955_RS13055 PF00768 D-alanyl-D-alanine carboxypeptidase NU955_RS13060 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS13065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NU955_RS13070 PF00875 DNA photolyase NU955_RS13070 PF03441 FAD binding domain of DNA photolyase NU955_RS13100 PF02350 UDP-N-acetylglucosamine 2-epimerase NU955_RS13115 PF03060 Nitronate monooxygenase NU955_RS13120 PF01207 Dihydrouridine synthase (Dus) NU955_RS13125 PF07759 Protein of unknown function (DUF1615) NU955_RS13135 PF01472 PUA domain NU955_RS13135 PF00696 Amino acid kinase family NU955_RS13140 PF01018 GTP1/OBG NU955_RS13140 PF01926 50S ribosome-binding GTPase NU955_RS13155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NU955_RS13155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NU955_RS13160 PF00892 EamA-like transporter family NU955_RS13170 PF04851 Type III restriction enzyme, res subunit NU955_RS13170 PF00271 Helicase conserved C-terminal domain NU955_RS13170 PF17757 UvrB interaction domain NU955_RS13170 PF12344 Ultra-violet resistance protein B NU955_RS13170 PF02151 UvrB/uvrC motif NU955_RS13180 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS13180 PF17151 Periplasmic sensor domain NU955_RS13190 PF00155 Aminotransferase class I and II NU955_RS13220 PF00106 short chain dehydrogenase NU955_RS13225 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NU955_RS13230 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NU955_RS13235 PF11967 Recombination protein O N terminal NU955_RS13235 PF02565 Recombination protein O C terminal NU955_RS13245 PF07650 KH domain NU955_RS13245 PF01926 50S ribosome-binding GTPase NU955_RS13250 PF14622 Ribonuclease-III-like NU955_RS13250 PF00035 Double-stranded RNA binding motif NU955_RS13260 PF10502 Signal peptidase, peptidase S26 NU955_RS13265 PF00009 Elongation factor Tu GTP binding domain NU955_RS13265 PF00679 Elongation factor G C-terminus NU955_RS13265 PF06421 GTP-binding protein LepA C-terminus NU955_RS13265 PF03144 Elongation factor Tu domain 2 NU955_RS13275 PF13180 PDZ domain NU955_RS13280 PF02910 Fumarate reductase flavoprotein C-term NU955_RS13280 PF00890 FAD binding domain NU955_RS13290 PF02223 Thymidylate kinase NU955_RS13295 PF02618 YceG-like family NU955_RS13300 PF01063 Amino-transferase class IV NU955_RS13315 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS13320 PF00528 Binding-protein-dependent transport system inner membrane component NU955_RS13325 PF12857 TOBE-like domain NU955_RS13325 PF00005 ABC transporter NU955_RS13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS13330 PF03466 LysR substrate binding domain NU955_RS13340 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS13340 PF14602 Hexapeptide repeat of succinyl-transferase NU955_RS13340 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NU955_RS13350 PF06508 Queuosine biosynthesis protein QueC NU955_RS13365 PF00578 AhpC/TSA family NU955_RS13375 PF01467 Cytidylyltransferase-like NU955_RS13375 PF00293 NUDIX domain NU955_RS13380 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS13385 PF01784 NIF3 (NGG1p interacting factor 3) NU955_RS13395 PF07690 Major Facilitator Superfamily NU955_RS13400 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NU955_RS13400 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NU955_RS13400 PF02769 AIR synthase related protein, C-terminal domain NU955_RS13405 PF01966 HD domain NU955_RS13410 PF01330 RuvA N terminal domain NU955_RS13410 PF07499 RuvA, C-terminal domain NU955_RS13415 PF17864 RuvB AAA lid domain NU955_RS13415 PF05491 RuvB C-terminal winged helix domain NU955_RS13415 PF05496 Holliday junction DNA helicase RuvB P-loop domain NU955_RS13425 PF03061 Thioesterase superfamily NU955_RS13430 PF01618 MotA/TolQ/ExbB proton channel family NU955_RS13435 PF02472 Biopolymer transport protein ExbD/TolR NU955_RS13445 PF04052 TolB amino-terminal domain NU955_RS13445 PF07676 WD40-like Beta Propeller Repeat NU955_RS13450 PF00691 OmpA family NU955_RS13460 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NU955_RS13465 PF00588 SpoU rRNA Methylase family NU955_RS13465 PF08032 RNA 2'-O ribose methyltransferase substrate binding NU955_RS13495 PF08299 Bacterial dnaA protein helix-turn-helix NU955_RS13495 PF11638 DnaA N-terminal domain NU955_RS13495 PF00308 Bacterial dnaA protein NU955_RS13500 PF01594 AI-2E family transporter NU955_RS13505 PF00586 AIR synthase related protein, N-terminal domain NU955_RS13505 PF02769 AIR synthase related protein, C-terminal domain NU955_RS13510 PF00551 Formyl transferase NU955_RS13515 PF12697 Alpha/beta hydrolase family NU955_RS13520 PF06965 Na+/H+ antiporter 1 NU955_RS13520 PF01343 Peptidase family S49 NU955_RS13530 PF00753 Metallo-beta-lactamase superfamily NU955_RS13530 PF03772 Competence protein NU955_RS13530 PF13567 Domain of unknown function (DUF4131) NU955_RS13535 PF00005 ABC transporter NU955_RS13540 PF02687 FtsX-like permease family NU955_RS13540 PF12704 MacB-like periplasmic core domain NU955_RS13550 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NU955_RS13565 PF00266 Aminotransferase class-V NU955_RS13575 PF13533 Biotin-lipoyl like NU955_RS13595 PF00535 Glycosyl transferase family 2 NU955_RS13610 PF00521 DNA gyrase/topoisomerase IV, subunit A NU955_RS13610 PF03989 DNA gyrase C-terminal domain, beta-propeller NU955_RS13615 PF00766 Electron transfer flavoprotein FAD-binding domain NU955_RS13615 PF01012 Electron transfer flavoprotein domain NU955_RS13620 PF01012 Electron transfer flavoprotein domain NU955_RS13625 PF00589 Phage integrase family NU955_RS13625 PF02899 Phage integrase, N-terminal SAM-like domain NU955_RS13630 PF01810 LysE type translocator NU955_RS13635 PF00561 alpha/beta hydrolase fold NU955_RS13640 PF01678 Diaminopimelate epimerase NU955_RS13645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NU955_RS13645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NU955_RS13655 PF00324 Amino acid permease NU955_RS13660 PF18073 Rubredoxin metal binding domain NU955_RS13670 PF00152 tRNA synthetases class II (D, K and N) NU955_RS13675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NU955_RS13675 PF11890 Domain of unknown function (DUF3410) NU955_RS13675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NU955_RS13680 PF06803 Protein of unknown function (DUF1232) NU955_RS13685 PF02634 FdhD/NarQ family NU955_RS13690 PF00384 Molybdopterin oxidoreductase NU955_RS13695 PF02595 Glycerate kinase family NU955_RS13710 PF00881 Nitroreductase family NU955_RS13725 PF13333 Integrase core domain NU955_RS13725 PF13276 HTH-like domain NU955_RS13725 PF00665 Integrase core domain NU955_RS13755 PF09857 Putative toxin of bacterial toxin-antitoxin pair NU955_RS13765 PF00550 Phosphopantetheine attachment site NU955_RS13765 PF00975 Thioesterase domain NU955_RS13765 PF00668 Condensation domain NU955_RS13765 PF13193 AMP-binding enzyme C-terminal domain NU955_RS13765 PF00501 AMP-binding enzyme NU955_RS13780 PF13676 TIR domain NU955_RS13785 PF09828 Chromate resistance exported protein NU955_RS13790 PF02417 Chromate transporter NU955_RS13800 PF14864 Alkyl sulfatase C-terminal NU955_RS13800 PF14863 Alkyl sulfatase dimerisation NU955_RS13800 PF00753 Metallo-beta-lactamase superfamily NU955_RS13810 PF01545 Cation efflux family NU955_RS13810 PF16916 Dimerisation domain of Zinc Transporter NU955_RS13825 PF07690 Major Facilitator Superfamily NU955_RS13845 PF00873 AcrB/AcrD/AcrF family NU955_RS13850 PF00529 HlyD membrane-fusion protein of T1SS NU955_RS13850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS13890 PF00872 Transposase, Mutator family NU955_RS13900 PF13333 Integrase core domain NU955_RS13900 PF13276 HTH-like domain NU955_RS13900 PF00665 Integrase core domain NU955_RS13955 PF13356 Arm DNA-binding domain NU955_RS13955 PF00589 Phage integrase family NU955_RS13965 PF01272 Transcription elongation factor, GreA/GreB, C-term NU955_RS13965 PF03449 Transcription elongation factor, N-terminal NU955_RS13970 PF01464 Transglycosylase SLT domain NU955_RS13970 PF00497 Bacterial extracellular solute-binding proteins, family 3 NU955_RS13980 PF01171 PP-loop family NU955_RS13985 PF01464 Transglycosylase SLT domain NU955_RS13990 PF01435 Peptidase family M48 NU955_RS14000 PF00873 AcrB/AcrD/AcrF family NU955_RS14005 PF03009 Glycerophosphoryl diester phosphodiesterase family NU955_RS14010 PF00753 Metallo-beta-lactamase superfamily NU955_RS14015 PF01219 Prokaryotic diacylglycerol kinase NU955_RS14020 PF00118 TCP-1/cpn60 chaperonin family NU955_RS14025 PF00166 Chaperonin 10 Kd subunit NU955_RS14030 PF00149 Calcineurin-like phosphoesterase NU955_RS14035 PF00781 Diacylglycerol kinase catalytic domain NU955_RS14040 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NU955_RS14040 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NU955_RS14045 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NU955_RS14045 PF01266 FAD dependent oxidoreductase NU955_RS14050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NU955_RS14050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NU955_RS14055 PF00083 Sugar (and other) transporter NU955_RS14070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NU955_RS14070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NU955_RS14085 PF09423 PhoD-like phosphatase NU955_RS14085 PF16655 PhoD-like phosphatase, N-terminal domain NU955_RS14105 PF00809 Pterin binding enzyme NU955_RS14110 PF00004 ATPase family associated with various cellular activities (AAA) NU955_RS14110 PF06480 FtsH Extracellular NU955_RS14110 PF01434 Peptidase family M41 NU955_RS14110 PF17862 AAA+ lid domain NU955_RS14115 PF01728 FtsJ-like methyltransferase NU955_RS14120 PF01985 CRS1 / YhbY (CRM) domain NU955_RS14135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NU955_RS14135 PF00117 Glutamine amidotransferase class-I NU955_RS14140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NU955_RS14140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NU955_RS14140 PF02142 MGS-like domain NU955_RS14145 PF01272 Transcription elongation factor, GreA/GreB, C-term NU955_RS14145 PF03449 Transcription elongation factor, N-terminal NU955_RS14150 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS14155 PF00582 Universal stress protein family NU955_RS14160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NU955_RS14170 PF09587 Bacterial capsule synthesis protein PGA_cap NU955_RS14185 PF00999 Sodium/hydrogen exchanger family NU955_RS14190 PF04228 Putative neutral zinc metallopeptidase NU955_RS14195 PF05661 Protein of unknown function (DUF808) NU955_RS14200 PF00579 tRNA synthetases class I (W and Y) NU955_RS14205 PF02629 CoA binding domain NU955_RS14205 PF00549 CoA-ligase NU955_RS14210 PF08442 ATP-grasp domain NU955_RS14210 PF00549 CoA-ligase NU955_RS14215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NU955_RS14215 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS14220 PF00364 Biotin-requiring enzyme NU955_RS14220 PF02817 e3 binding domain NU955_RS14220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NU955_RS14225 PF16078 2-oxoglutarate dehydrogenase N-terminus NU955_RS14225 PF00676 Dehydrogenase E1 component NU955_RS14225 PF16870 2-oxoglutarate dehydrogenase C-terminal NU955_RS14225 PF02779 Transketolase, pyrimidine binding domain NU955_RS14240 PF13085 2Fe-2S iron-sulfur cluster binding domain NU955_RS14245 PF00890 FAD binding domain NU955_RS14245 PF02910 Fumarate reductase flavoprotein C-term NU955_RS14250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NU955_RS14255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NU955_RS14260 PF00285 Citrate synthase, C-terminal domain NU955_RS14270 PF00581 Rhodanese-like domain NU955_RS14270 PF17773 UPF0176 acylphosphatase like domain NU955_RS14285 PF04545 Sigma-70, region 4 NU955_RS14285 PF04539 Sigma-70 region 3 NU955_RS14285 PF04542 Sigma-70 region 2 NU955_RS14285 PF00140 Sigma-70 factor, region 1.2 NU955_RS14285 PF03979 Sigma-70 factor, region 1.1 NU955_RS14285 PF04546 Sigma-70, non-essential region NU955_RS14290 PF04359 Protein of unknown function (DUF493) NU955_RS14295 PF03099 Biotin/lipoate A/B protein ligase family NU955_RS14305 PF00465 Iron-containing alcohol dehydrogenase NU955_RS14310 PF13520 Amino acid permease NU955_RS14315 PF03358 NADPH-dependent FMN reductase NU955_RS14320 PF01638 HxlR-like helix-turn-helix NU955_RS14325 PF00588 SpoU rRNA Methylase family NU955_RS14330 PF14824 Sirohaem biosynthesis protein central NU955_RS14330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NU955_RS14330 PF10414 Sirohaem synthase dimerisation region NU955_RS14335 PF02403 Seryl-tRNA synthetase N-terminal domain NU955_RS14335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NU955_RS14345 PF03548 Outer membrane lipoprotein carrier protein LolA NU955_RS14350 PF01016 Ribosomal L27 protein NU955_RS14355 PF00829 Ribosomal prokaryotic L21 protein NU955_RS14365 PF00348 Polyprenyl synthetase NU955_RS14375 PF01569 PAP2 superfamily NU955_RS14380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS14380 PF00529 HlyD membrane-fusion protein of T1SS NU955_RS14385 PF00873 AcrB/AcrD/AcrF family NU955_RS14390 PF02321 Outer membrane efflux protein NU955_RS14395 PF01906 Putative heavy-metal-binding NU955_RS14420 PF08264 Anticodon-binding domain of tRNA NU955_RS14420 PF00133 tRNA synthetases class I (I, L, M and V) NU955_RS14420 PF10458 Valyl tRNA synthetase tRNA binding arm NU955_RS14425 PF01119 DNA mismatch repair protein, C-terminal domain NU955_RS14425 PF08676 MutL C terminal dimerisation domain NU955_RS14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS14440 PF03466 LysR substrate binding domain NU955_RS14445 PF00909 Ammonium Transporter Family NU955_RS14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS14455 PF08521 Two-component sensor kinase N-terminal NU955_RS14455 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS14460 PF00072 Response regulator receiver domain NU955_RS14460 PF00486 Transcriptional regulatory protein, C terminal NU955_RS14465 PF08019 Phosphoethanolamine transferase EptA/EptB NU955_RS14465 PF00884 Sulfatase NU955_RS14485 PF01734 Patatin-like phospholipase NU955_RS14495 PF01145 SPFH domain / Band 7 family NU955_RS14500 PF04237 YjbR NU955_RS14505 PF00348 Polyprenyl synthetase NU955_RS14510 PF04303 PrpF protein NU955_RS14515 PF00324 Amino acid permease NU955_RS14525 PF01965 DJ-1/PfpI family NU955_RS14530 PF00698 Acyl transferase domain NU955_RS14530 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS14530 PF08990 Erythronolide synthase docking NU955_RS14530 PF09277 Erythronolide synthase, docking NU955_RS14530 PF16197 Ketoacyl-synthetase C-terminal extension NU955_RS14530 PF00109 Beta-ketoacyl synthase, N-terminal domain NU955_RS14530 PF02801 Beta-ketoacyl synthase, C-terminal domain NU955_RS14530 PF08659 KR domain NU955_RS14530 PF00550 Phosphopantetheine attachment site NU955_RS14530 PF14765 Polyketide synthase dehydratase NU955_RS14535 PF12833 Helix-turn-helix domain NU955_RS14535 PF06719 AraC-type transcriptional regulator N-terminus NU955_RS14540 PF02673 Bacitracin resistance protein BacA NU955_RS14560 PF02525 Flavodoxin-like fold NU955_RS14575 PF01507 Phosphoadenosine phosphosulfate reductase family NU955_RS14580 PF06974 Protein of unknown function (DUF1298) NU955_RS14580 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NU955_RS14590 PF00575 S1 RNA binding domain NU955_RS14590 PF10150 Ribonuclease E/G family NU955_RS14595 PF02545 Maf-like protein NU955_RS14600 PF04093 rod shape-determining protein MreD NU955_RS14605 PF04085 rod shape-determining protein MreC NU955_RS14615 PF02686 Glu-tRNAGln amidotransferase C subunit NU955_RS14620 PF01425 Amidase NU955_RS14625 PF02934 GatB/GatE catalytic domain NU955_RS14625 PF02637 GatB domain NU955_RS14650 PF01431 Peptidase family M13 NU955_RS14650 PF05649 Peptidase family M13 NU955_RS14655 PF05992 SbmA/BacA-like family NU955_RS14665 PF01734 Patatin-like phospholipase NU955_RS14670 PF01235 Sodium:alanine symporter family NU955_RS14685 PF00881 Nitroreductase family NU955_RS14690 PF07690 Major Facilitator Superfamily NU955_RS14695 PF12805 FUSC-like inner membrane protein yccS NU955_RS14705 PF00175 Oxidoreductase NAD-binding domain NU955_RS14705 PF00667 FAD binding domain NU955_RS14705 PF00258 Flavodoxin NU955_RS14745 PF17969 L,D-transpeptidase C-terminal domain NU955_RS14745 PF03734 L,D-transpeptidase catalytic domain NU955_RS14750 PF04304 Protein of unknown function (DUF454) NU955_RS14760 PF08085 Entericidin EcnA/B family NU955_RS14765 PF01546 Peptidase family M20/M25/M40 NU955_RS14765 PF07687 Peptidase dimerisation domain NU955_RS14780 PF01584 CheW-like domain NU955_RS14780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS14780 PF01627 Hpt domain NU955_RS14780 PF00072 Response regulator receiver domain NU955_RS14785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NU955_RS14785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NU955_RS14790 PF01584 CheW-like domain NU955_RS14795 PF00072 Response regulator receiver domain NU955_RS14800 PF00072 Response regulator receiver domain NU955_RS14815 PF00873 AcrB/AcrD/AcrF family NU955_RS14820 PF03129 Anticodon binding domain NU955_RS14820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NU955_RS14820 PF04073 Aminoacyl-tRNA editing domain NU955_RS14830 PF03831 PhnA domain NU955_RS14830 PF08274 PhnA Zinc-Ribbon NU955_RS14835 PF04343 Protein of unknown function, DUF488 NU955_RS14845 PF01571 Aminomethyltransferase folate-binding domain NU955_RS14850 PF13098 Thioredoxin-like domain NU955_RS14850 PF10411 Disulfide bond isomerase protein N-terminus NU955_RS14860 PF03547 Membrane transport protein NU955_RS14865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NU955_RS14870 PF07715 TonB-dependent Receptor Plug Domain NU955_RS14870 PF00593 TonB dependent receptor NU955_RS14875 PF02245 Methylpurine-DNA glycosylase (MPG) NU955_RS14880 PF06827 Zinc finger found in FPG and IleRS NU955_RS14880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NU955_RS14880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NU955_RS14895 PF01741 Large-conductance mechanosensitive channel, MscL NU955_RS14900 PF03144 Elongation factor Tu domain 2 NU955_RS14900 PF00009 Elongation factor Tu GTP binding domain NU955_RS14900 PF00679 Elongation factor G C-terminus NU955_RS14905 PF00860 Permease family NU955_RS14910 PF05175 Methyltransferase small domain NU955_RS14910 PF08468 Methyltransferase small domain N-terminal NU955_RS14915 PF00324 Amino acid permease NU955_RS14920 PF01139 tRNA-splicing ligase RtcB NU955_RS14930 PF13505 Outer membrane protein beta-barrel domain NU955_RS14930 PF00691 OmpA family NU955_RS14940 PF02803 Thiolase, C-terminal domain NU955_RS14940 PF00108 Thiolase, N-terminal domain NU955_RS14950 PF00893 Small Multidrug Resistance protein NU955_RS14960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NU955_RS14960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NU955_RS14965 PF01011 PQQ enzyme repeat NU955_RS14970 PF04966 Carbohydrate-selective porin, OprB family NU955_RS14975 PF02515 CoA-transferase family III NU955_RS14980 PF12833 Helix-turn-helix domain NU955_RS14980 PF02311 AraC-like ligand binding domain NU955_RS14985 PF02803 Thiolase, C-terminal domain NU955_RS14985 PF00108 Thiolase, N-terminal domain NU955_RS14990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NU955_RS14990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NU955_RS14990 PF00378 Enoyl-CoA hydratase/isomerase NU955_RS15015 PF03006 Haemolysin-III related NU955_RS15020 PF07690 Major Facilitator Superfamily NU955_RS15020 PF00083 Sugar (and other) transporter NU955_RS15030 PF07517 SecA DEAD-like domain NU955_RS15030 PF01043 SecA preprotein cross-linking domain NU955_RS15030 PF07516 SecA Wing and Scaffold domain NU955_RS15030 PF02810 SEC-C motif NU955_RS15035 PF10417 C-terminal domain of 1-Cys peroxiredoxin NU955_RS15035 PF00578 AhpC/TSA family NU955_RS15040 PF00753 Metallo-beta-lactamase superfamily NU955_RS15055 PF02875 Mur ligase family, glutamate ligase domain NU955_RS15055 PF08245 Mur ligase middle domain NU955_RS15060 PF01039 Carboxyl transferase domain NU955_RS15065 PF00290 Tryptophan synthase alpha chain NU955_RS15090 PF00291 Pyridoxal-phosphate dependent enzyme NU955_RS15095 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NU955_RS15100 PF00593 TonB dependent receptor NU955_RS15100 PF07715 TonB-dependent Receptor Plug Domain NU955_RS15105 PF01923 Cobalamin adenosyltransferase NU955_RS15125 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NU955_RS15130 PF00486 Transcriptional regulatory protein, C terminal NU955_RS15130 PF00072 Response regulator receiver domain NU955_RS15135 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS15135 PF00672 HAMP domain NU955_RS15145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS15145 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS15145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS15145 PF12806 Acetyl-CoA dehydrogenase C-terminal like NU955_RS15150 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS15150 PF12806 Acetyl-CoA dehydrogenase C-terminal like NU955_RS15150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS15150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS15155 PF06146 Phosphate-starvation-inducible E NU955_RS15175 PF07715 TonB-dependent Receptor Plug Domain NU955_RS15175 PF00593 TonB dependent receptor NU955_RS15185 PF00152 tRNA synthetases class II (D, K and N) NU955_RS15185 PF02938 GAD domain NU955_RS15185 PF01336 OB-fold nucleic acid binding domain NU955_RS15200 PF00535 Glycosyl transferase family 2 NU955_RS15205 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NU955_RS15210 PF00483 Nucleotidyl transferase NU955_RS15215 PF04321 RmlD substrate binding domain NU955_RS15220 PF16363 GDP-mannose 4,6 dehydratase NU955_RS15230 PF00534 Glycosyl transferases group 1 NU955_RS15230 PF13439 Glycosyltransferase Family 4 NU955_RS15235 PF01522 Polysaccharide deacetylase NU955_RS15245 PF01063 Amino-transferase class IV NU955_RS15250 PF03710 Glutamate-ammonia ligase adenylyltransferase NU955_RS15250 PF08335 GlnD PII-uridylyltransferase NU955_RS15255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS15255 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS15255 PF07689 KaiB domain NU955_RS15265 PF02547 Queuosine biosynthesis protein NU955_RS15280 PF01702 Queuine tRNA-ribosyltransferase NU955_RS15285 PF02699 Preprotein translocase subunit NU955_RS15290 PF07549 SecD/SecF GG Motif NU955_RS15290 PF13721 SecD export protein N-terminal TM region NU955_RS15290 PF02355 Protein export membrane protein NU955_RS15295 PF02355 Protein export membrane protein NU955_RS15295 PF07549 SecD/SecF GG Motif NU955_RS15300 PF04127 DNA / pantothenate metabolism flavoprotein NU955_RS15300 PF02441 Flavoprotein NU955_RS15305 PF04002 RadC-like JAB domain NU955_RS15310 PF01062 Bestrophin, RFP-TM, chloride channel NU955_RS15315 PF02811 PHP domain NU955_RS15320 PF04279 Intracellular septation protein A NU955_RS15325 PF03795 YCII-related domain NU955_RS15335 PF01266 FAD dependent oxidoreductase NU955_RS15335 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NU955_RS15345 PF04461 Protein of unknown function (DUF520) NU955_RS15355 PF03061 Thioesterase superfamily NU955_RS15360 PF00085 Thioredoxin NU955_RS15365 PF00561 alpha/beta hydrolase fold NU955_RS15370 PF04273 Putative phosphatase (DUF442) NU955_RS15370 PF00753 Metallo-beta-lactamase superfamily NU955_RS15380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NU955_RS15380 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS15415 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS15415 PF17152 Periplasmic sensor domain NU955_RS15420 PF01389 OmpA-like transmembrane domain NU955_RS15420 PF00691 OmpA family NU955_RS15425 PF00149 Calcineurin-like phosphoesterase NU955_RS15425 PF10518 TAT (twin-arginine translocation) pathway signal sequence NU955_RS15430 PF13091 PLD-like domain NU955_RS15440 PF16360 GTP-binding GTPase Middle Region NU955_RS15440 PF13167 GTP-binding GTPase N-terminal NU955_RS15440 PF01926 50S ribosome-binding GTPase NU955_RS15460 PF00149 Calcineurin-like phosphoesterase NU955_RS15465 PF00398 Ribosomal RNA adenine dimethylase NU955_RS15470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NU955_RS15475 PF00572 Ribosomal protein L13 NU955_RS15480 PF00380 Ribosomal protein S9/S16 NU955_RS15485 PF13417 Glutathione S-transferase, N-terminal domain NU955_RS15485 PF00043 Glutathione S-transferase, C-terminal domain NU955_RS15490 PF04386 Stringent starvation protein B NU955_RS15500 PF02785 Biotin carboxylase C-terminal domain NU955_RS15500 PF00289 Biotin carboxylase, N-terminal domain NU955_RS15500 PF00364 Biotin-requiring enzyme NU955_RS15500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NU955_RS15510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS15510 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS15510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS15515 PF01039 Carboxyl transferase domain NU955_RS15530 PF00440 Bacterial regulatory proteins, tetR family NU955_RS15530 PF17932 Tetracyclin repressor-like, C-terminal domain NU955_RS15535 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS15535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS15580 PF01066 CDP-alcohol phosphatidyltransferase NU955_RS15585 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NU955_RS15605 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NU955_RS15605 PF00056 lactate/malate dehydrogenase, NAD binding domain NU955_RS15615 PF01464 Transglycosylase SLT domain NU955_RS15615 PF01551 Peptidase family M23 NU955_RS15615 PF10145 Phage-related minor tail protein NU955_RS15620 PF04055 Radical SAM superfamily NU955_RS15620 PF01938 TRAM domain NU955_RS15620 PF00919 Uncharacterized protein family UPF0004 NU955_RS15625 PF02562 PhoH-like protein NU955_RS15630 PF02130 Uncharacterized protein family UPF0054 NU955_RS15655 PF03358 NADPH-dependent FMN reductase NU955_RS15660 PF03631 Virulence factor BrkB NU955_RS15665 PF00892 EamA-like transporter family NU955_RS15670 PF12833 Helix-turn-helix domain NU955_RS15675 PF01557 Fumarylacetoacetate (FAA) hydrolase family NU955_RS15720 PF17876 Cold shock domain NU955_RS15720 PF08461 Ribonuclease R winged-helix domain NU955_RS15720 PF00575 S1 RNA binding domain NU955_RS15720 PF00773 RNB domain NU955_RS15720 PF08206 Ribonuclease B OB domain NU955_RS15725 PF01432 Peptidase family M3 NU955_RS15730 PF09526 Probable metal-binding protein (DUF2387) NU955_RS15760 PF03937 Flavinator of succinate dehydrogenase NU955_RS15765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS15765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS15765 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS15770 PF00743 Flavin-binding monooxygenase-like NU955_RS15775 PF01196 Ribosomal protein L17 NU955_RS15780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NU955_RS15780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NU955_RS15780 PF01000 RNA polymerase Rpb3/RpoA insert domain NU955_RS15785 PF01479 S4 domain NU955_RS15785 PF00163 Ribosomal protein S4/S9 N-terminal domain NU955_RS15790 PF00411 Ribosomal protein S11 NU955_RS15795 PF00416 Ribosomal protein S13/S18 NU955_RS15800 PF00444 Ribosomal protein L36 NU955_RS15805 PF00344 SecY translocase NU955_RS15810 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NU955_RS15815 PF00327 Ribosomal protein L30p/L7e NU955_RS15820 PF00333 Ribosomal protein S5, N-terminal domain NU955_RS15820 PF03719 Ribosomal protein S5, C-terminal domain NU955_RS15825 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NU955_RS15830 PF00347 Ribosomal protein L6 NU955_RS15835 PF00410 Ribosomal protein S8 NU955_RS15840 PF00253 Ribosomal protein S14p/S29e NU955_RS15845 PF00673 ribosomal L5P family C-terminus NU955_RS15845 PF00281 Ribosomal protein L5 NU955_RS15850 PF00467 KOW motif NU955_RS15850 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NU955_RS15855 PF00238 Ribosomal protein L14p/L23e NU955_RS15860 PF00366 Ribosomal protein S17 NU955_RS15865 PF00831 Ribosomal L29 protein NU955_RS15870 PF00252 Ribosomal protein L16p/L10e NU955_RS15880 PF00237 Ribosomal protein L22p/L17e NU955_RS15885 PF00203 Ribosomal protein S19 NU955_RS15890 PF00181 Ribosomal Proteins L2, RNA binding domain NU955_RS15890 PF03947 Ribosomal Proteins L2, C-terminal domain NU955_RS15895 PF00276 Ribosomal protein L23 NU955_RS15900 PF00573 Ribosomal protein L4/L1 family NU955_RS15905 PF00297 Ribosomal protein L3 NU955_RS15910 PF00338 Ribosomal protein S10p/S20e NU955_RS15915 PF00117 Glutamine amidotransferase class-I NU955_RS15920 PF01053 Cys/Met metabolism PLP-dependent enzyme NU955_RS15925 PF05872 Bacterial protein of unknown function (DUF853) NU955_RS15935 PF00970 Oxidoreductase FAD-binding domain NU955_RS15935 PF00042 Globin NU955_RS15935 PF00175 Oxidoreductase NAD-binding domain NU955_RS15940 PF02082 Transcriptional regulator NU955_RS15945 PF01926 50S ribosome-binding GTPase NU955_RS15955 PF00375 Sodium:dicarboxylate symporter family NU955_RS15965 PF01553 Acyltransferase NU955_RS15980 PF17191 RecG wedge domain NU955_RS15980 PF00271 Helicase conserved C-terminal domain NU955_RS15980 PF00270 DEAD/DEAH box helicase NU955_RS15985 PF00156 Phosphoribosyl transferase domain NU955_RS15990 PF00293 NUDIX domain NU955_RS15995 PF03641 Possible lysine decarboxylase NU955_RS16000 PF01544 CorA-like Mg2+ transporter protein NU955_RS16010 PF05494 MlaC protein NU955_RS16020 PF02405 Permease MlaE NU955_RS16025 PF00005 ABC transporter NU955_RS16035 PF03880 DbpA RNA binding domain NU955_RS16035 PF00270 DEAD/DEAH box helicase NU955_RS16035 PF12343 Cold shock protein DEAD box A NU955_RS16035 PF00271 Helicase conserved C-terminal domain NU955_RS16040 PF00459 Inositol monophosphatase family NU955_RS16045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NU955_RS16045 PF02780 Transketolase, C-terminal domain NU955_RS16045 PF02779 Transketolase, pyrimidine binding domain NU955_RS16050 PF00925 GTP cyclohydrolase II NU955_RS16055 PF01218 Coproporphyrinogen III oxidase NU955_RS16060 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NU955_RS16060 PF01488 Shikimate / quinate 5-dehydrogenase NU955_RS16060 PF08501 Shikimate dehydrogenase substrate binding domain NU955_RS16070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NU955_RS16070 PF12806 Acetyl-CoA dehydrogenase C-terminal like NU955_RS16070 PF02770 Acyl-CoA dehydrogenase, middle domain NU955_RS16070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NU955_RS16080 PF04024 PspC domain NU955_RS16085 PF00571 CBS domain NU955_RS16110 PF02091 Glycyl-tRNA synthetase alpha subunit NU955_RS16115 PF05746 DALR anticodon binding domain NU955_RS16115 PF02092 Glycyl-tRNA synthetase beta subunit NU955_RS16120 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system NU955_RS16145 PF13737 Transposase DDE domain NU955_RS16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS16155 PF03466 LysR substrate binding domain NU955_RS16185 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NU955_RS16190 PF04996 Succinylarginine dihydrolase NU955_RS16195 PF00171 Aldehyde dehydrogenase family NU955_RS16200 PF04958 Arginine N-succinyltransferase beta subunit NU955_RS16205 PF00202 Aminotransferase class-III NU955_RS16210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NU955_RS16210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NU955_RS16215 PF00324 Amino acid permease NU955_RS16225 PF08241 Methyltransferase domain NU955_RS16245 PF13614 AAA domain NU955_RS16250 PF01594 AI-2E family transporter NU955_RS16255 PF00080 Copper/zinc superoxide dismutase (SODC) NU955_RS16260 PF12805 FUSC-like inner membrane protein yccS NU955_RS16265 PF07690 Major Facilitator Superfamily NU955_RS16275 PF02525 Flavodoxin-like fold NU955_RS16280 PF03992 Antibiotic biosynthesis monooxygenase NU955_RS16290 PF02913 FAD linked oxidases, C-terminal domain NU955_RS16290 PF01565 FAD binding domain NU955_RS16295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NU955_RS16295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NU955_RS16300 PF00892 EamA-like transporter family NU955_RS16305 PF00892 EamA-like transporter family NU955_RS16315 PF01925 Sulfite exporter TauE/SafE NU955_RS16320 PF09157 Pseudouridine synthase II TruB, C-terminal NU955_RS16320 PF16198 tRNA pseudouridylate synthase B C-terminal domain NU955_RS16320 PF01509 TruB family pseudouridylate synthase (N terminal domain) NU955_RS16325 PF03280 Proteobacterial lipase chaperone protein NU955_RS16330 PF00561 alpha/beta hydrolase fold NU955_RS16335 PF01245 Ribosomal protein L19 NU955_RS16340 PF01746 tRNA (Guanine-1)-methyltransferase NU955_RS16345 PF01782 RimM N-terminal domain NU955_RS16345 PF05239 PRC-barrel domain NU955_RS16350 PF00886 Ribosomal protein S16 NU955_RS16390 PF02401 LytB protein NU955_RS16395 PF00625 Guanylate kinase NU955_RS16400 PF01192 RNA polymerase Rpb6 NU955_RS16410 PF04607 Region found in RelA / SpoT proteins NU955_RS16410 PF02824 TGS domain NU955_RS16410 PF13291 ACT domain NU955_RS16415 PF01042 Endoribonuclease L-PSP NU955_RS16420 PF04324 BFD-like [2Fe-2S] binding domain NU955_RS16425 PF00210 Ferritin-like domain NU955_RS16430 PF15864 Protein glycosylation ligase NU955_RS16430 PF04932 O-Antigen ligase NU955_RS16430 PF11846 Virulence factor membrane-bound polymerase, C-terminal NU955_RS16440 PF00114 Pilin (bacterial filament) NU955_RS16440 PF07963 Prokaryotic N-terminal methylation motif NU955_RS16450 PF04536 TPM domain NU955_RS16455 PF04011 LemA family NU955_RS16465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NU955_RS16465 PF07992 Pyridine nucleotide-disulphide oxidoreductase NU955_RS16470 PF00310 Glutamine amidotransferases class-II NU955_RS16470 PF04898 Glutamate synthase central domain NU955_RS16470 PF01645 Conserved region in glutamate synthase NU955_RS16470 PF01493 GXGXG motif NU955_RS16480 PF01761 3-dehydroquinate synthase NU955_RS16485 PF01202 Shikimate kinase NU955_RS16490 PF00263 Bacterial type II and III secretion system protein NU955_RS16490 PF07660 Secretin and TonB N terminus short domain NU955_RS16490 PF03958 Bacterial type II/III secretion system short domain NU955_RS16490 PF11741 AMIN domain NU955_RS16500 PF04350 Pilus assembly protein, PilO NU955_RS16505 PF05137 Fimbrial assembly protein (PilN) NU955_RS16510 PF11104 Type IV pilus assembly protein PilM; NU955_RS16515 PF17092 Penicillin-binding protein OB-like domain NU955_RS16515 PF00912 Transglycosylase NU955_RS16515 PF00905 Penicillin binding protein transpeptidase domain NU955_RS16520 PF13847 Methyltransferase domain NU955_RS16530 PF00953 Glycosyl transferase family 4 NU955_RS16535 PF02875 Mur ligase family, glutamate ligase domain NU955_RS16535 PF01225 Mur ligase family, catalytic domain NU955_RS16535 PF08245 Mur ligase middle domain NU955_RS16540 PF08245 Mur ligase middle domain NU955_RS16540 PF01225 Mur ligase family, catalytic domain NU955_RS16540 PF02875 Mur ligase family, glutamate ligase domain NU955_RS16545 PF03717 Penicillin-binding Protein dimerisation domain NU955_RS16545 PF00905 Penicillin binding protein transpeptidase domain NU955_RS16555 PF01795 MraW methylase family NU955_RS16570 PF00749 tRNA synthetases class I (E and Q), catalytic domain NU955_RS16585 PF00324 Amino acid permease NU955_RS16615 PF01545 Cation efflux family NU955_RS16620 PF00873 AcrB/AcrD/AcrF family NU955_RS16625 PF00529 HlyD membrane-fusion protein of T1SS NU955_RS16625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS16650 PF12848 ABC transporter NU955_RS16650 PF00005 ABC transporter NU955_RS16655 PF01053 Cys/Met metabolism PLP-dependent enzyme NU955_RS16660 PF00106 short chain dehydrogenase NU955_RS16665 PF00916 Sulfate permease family NU955_RS16665 PF01740 STAS domain NU955_RS16670 PF17674 HHH domain NU955_RS16670 PF09371 Tex-like protein N-terminal domain NU955_RS16670 PF00575 S1 RNA binding domain NU955_RS16670 PF16921 Tex protein YqgF-like domain NU955_RS16675 PF00072 Response regulator receiver domain NU955_RS16675 PF00486 Transcriptional regulatory protein, C terminal NU955_RS16680 PF00672 HAMP domain NU955_RS16680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS16680 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS16690 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NU955_RS16690 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NU955_RS16695 PF00583 Acetyltransferase (GNAT) family NU955_RS16715 PF00475 Imidazoleglycerol-phosphate dehydratase NU955_RS16720 PF00117 Glutamine amidotransferase class-I NU955_RS16735 PF00977 Histidine biosynthesis protein NU955_RS16760 PF01636 Phosphotransferase enzyme family NU955_RS16765 PF00977 Histidine biosynthesis protein NU955_RS16805 PF02705 K+ potassium transporter NU955_RS16825 PF02525 Flavodoxin-like fold NU955_RS16830 PF01638 HxlR-like helix-turn-helix NU955_RS16860 PF12833 Helix-turn-helix domain NU955_RS16860 PF02311 AraC-like ligand binding domain NU955_RS16865 PF00248 Aldo/keto reductase family NU955_RS16885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS16885 PF03466 LysR substrate binding domain NU955_RS16890 PF07690 Major Facilitator Superfamily NU955_RS16910 PF16295 Tetracyclin repressor-like, C-terminal domain NU955_RS16910 PF00440 Bacterial regulatory proteins, tetR family NU955_RS16970 PF01593 Flavin containing amine oxidoreductase NU955_RS16975 PF05726 Pirin C-terminal cupin domain NU955_RS16975 PF02678 Pirin NU955_RS16980 PF00857 Isochorismatase family NU955_RS16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS16990 PF00171 Aldehyde dehydrogenase family NU955_RS16995 PF00202 Aminotransferase class-III NU955_RS17000 PF00392 Bacterial regulatory proteins, gntR family NU955_RS17000 PF00155 Aminotransferase class I and II NU955_RS17005 PF00324 Amino acid permease NU955_RS17015 PF03591 AzlC protein NU955_RS17025 PF00436 Single-strand binding protein family NU955_RS17030 PF07690 Major Facilitator Superfamily NU955_RS17040 PF02581 Thiamine monophosphate synthase NU955_RS17040 PF08543 Phosphomethylpyrimidine kinase NU955_RS17040 PF03070 TENA/THI-4/PQQC family NU955_RS17045 PF06942 GlpM protein NU955_RS17055 PF00107 Zinc-binding dehydrogenase NU955_RS17055 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS17060 PF00440 Bacterial regulatory proteins, tetR family NU955_RS17060 PF16925 Tetracyclin repressor-like, C-terminal domain NU955_RS17065 PF00005 ABC transporter NU955_RS17065 PF17760 UvrA interaction domain NU955_RS17065 PF17755 UvrA DNA-binding domain NU955_RS17070 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS17080 PF02028 BCCT, betaine/carnitine/choline family transporter NU955_RS17090 PF00474 Sodium:solute symporter family NU955_RS17095 PF04341 Protein of unknown function, DUF485 NU955_RS17100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS17100 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS17100 PF01627 Hpt domain NU955_RS17100 PF00072 Response regulator receiver domain NU955_RS17100 PF00672 HAMP domain NU955_RS17110 PF00196 Bacterial regulatory proteins, luxR family NU955_RS17110 PF00072 Response regulator receiver domain NU955_RS17115 PF03358 NADPH-dependent FMN reductase NU955_RS17120 PF00296 Luciferase-like monooxygenase NU955_RS17125 PF01037 Lrp/AsnC ligand binding domain NU955_RS17130 PF00857 Isochorismatase family NU955_RS17135 PF16177 Acetyl-coenzyme A synthetase N-terminus NU955_RS17135 PF13193 AMP-binding enzyme C-terminal domain NU955_RS17135 PF00501 AMP-binding enzyme NU955_RS17145 PF00924 Mechanosensitive ion channel NU955_RS17150 PF04452 RNA methyltransferase NU955_RS17155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NU955_RS17160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NU955_RS17180 PF01368 DHH family NU955_RS17180 PF17768 RecJ OB domain NU955_RS17180 PF02272 DHHA1 domain NU955_RS17185 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NU955_RS17185 PF01243 Pyridoxamine 5'-phosphate oxidase NU955_RS17190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NU955_RS17190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NU955_RS17190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NU955_RS17190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NU955_RS17195 PF00478 IMP dehydrogenase / GMP reductase domain NU955_RS17195 PF00571 CBS domain NU955_RS17200 PF03692 Putative zinc- or iron-chelating domain NU955_RS17205 PF01613 Flavin reductase like domain NU955_RS17205 PF00258 Flavodoxin NU955_RS17210 PF00593 TonB dependent receptor NU955_RS17210 PF07715 TonB-dependent Receptor Plug Domain NU955_RS17215 PF01169 Uncharacterized protein family UPF0016 NU955_RS17225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NU955_RS17225 PF00364 Biotin-requiring enzyme NU955_RS17225 PF02817 e3 binding domain NU955_RS17230 PF17831 Pyruvate dehydrogenase E1 component middle domain NU955_RS17230 PF00456 Transketolase, thiamine diphosphate binding domain NU955_RS17235 PF01551 Peptidase family M23 NU955_RS17245 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NU955_RS17250 PF12327 FtsZ family, C-terminal domain NU955_RS17250 PF00091 Tubulin/FtsZ family, GTPase domain NU955_RS17255 PF02491 SHS2 domain inserted in FTSA NU955_RS17260 PF03799 Cell division protein FtsQ NU955_RS17260 PF08478 POTRA domain, FtsQ-type NU955_RS17265 PF07478 D-ala D-ala ligase C-terminus NU955_RS17265 PF01820 D-ala D-ala ligase N-terminus NU955_RS17270 PF01225 Mur ligase family, catalytic domain NU955_RS17270 PF02875 Mur ligase family, glutamate ligase domain NU955_RS17270 PF08245 Mur ligase middle domain NU955_RS17275 PF03033 Glycosyltransferase family 28 N-terminal domain NU955_RS17275 PF04101 Glycosyltransferase family 28 C-terminal domain NU955_RS17280 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NU955_RS17280 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NU955_RS17290 PF00593 TonB dependent receptor NU955_RS17290 PF07715 TonB-dependent Receptor Plug Domain NU955_RS17305 PF00156 Phosphoribosyl transferase domain NU955_RS17310 PF03372 Endonuclease/Exonuclease/phosphatase family NU955_RS17315 PF03960 ArsC family NU955_RS17325 PF07859 alpha/beta hydrolase fold NU955_RS17330 PF00990 Diguanylate cyclase, GGDEF domain NU955_RS17330 PF07694 5TMR of 5TMR-LYT NU955_RS17335 PF02683 Cytochrome C biogenesis protein transmembrane region NU955_RS17335 PF11412 Disulphide bond corrector protein DsbC NU955_RS17365 PF00576 HIUase/Transthyretin family NU955_RS17370 PF00860 Permease family NU955_RS17380 PF01494 FAD binding domain NU955_RS17385 PF03561 Allantoicase repeat NU955_RS17390 PF04115 Ureidoglycolate lyase NU955_RS17395 PF00106 short chain dehydrogenase NU955_RS17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS17400 PF00204 DNA gyrase B NU955_RS17400 PF00986 DNA gyrase B subunit, carboxyl terminus NU955_RS17400 PF01751 Toprim domain NU955_RS17405 PF05728 Uncharacterised protein family (UPF0227) NU955_RS17450 PF01471 Putative peptidoglycan binding domain NU955_RS17450 PF01476 LysM domain NU955_RS17450 PF01510 N-acetylmuramoyl-L-alanine amidase NU955_RS17455 PF04717 Type VI secretion system, phage-baseplate injector NU955_RS17455 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NU955_RS17455 PF13296 Putative type VI secretion system Rhs element Vgr NU955_RS17460 PF02600 Disulfide bond formation protein DsbB NU955_RS17465 PF04262 Glutamate-cysteine ligase NU955_RS17480 PF04286 Protein of unknown function (DUF445) NU955_RS17485 PF00155 Aminotransferase class I and II NU955_RS17490 PF01554 MatE NU955_RS17495 PF00106 short chain dehydrogenase NU955_RS17505 PF00072 Response regulator receiver domain NU955_RS17505 PF00486 Transcriptional regulatory protein, C terminal NU955_RS17510 PF11808 Phosphate regulon sensor protein PhoR NU955_RS17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS17510 PF00989 PAS fold NU955_RS17510 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS17520 PF02666 Phosphatidylserine decarboxylase NU955_RS17525 PF00581 Rhodanese-like domain NU955_RS17530 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NU955_RS17530 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NU955_RS17535 PF02580 D-Tyr-tRNA(Tyr) deacylase NU955_RS17560 PF00925 GTP cyclohydrolase II NU955_RS17560 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NU955_RS17565 PF00885 6,7-dimethyl-8-ribityllumazine synthase NU955_RS17570 PF01029 NusB family NU955_RS17575 PF00586 AIR synthase related protein, N-terminal domain NU955_RS17575 PF02769 AIR synthase related protein, C-terminal domain NU955_RS17580 PF04608 Phosphatidylglycerophosphatase A NU955_RS17585 PF00132 Bacterial transferase hexapeptide (six repeats) NU955_RS17585 PF14602 Hexapeptide repeat of succinyl-transferase NU955_RS17585 PF12804 MobA-like NTP transferase domain NU955_RS17590 PF01380 SIS domain NU955_RS17595 PF08721 TnsA endonuclease C terminal NU955_RS17595 PF08722 TnsA endonuclease N terminal NU955_RS17600 PF00665 Integrase core domain NU955_RS17605 PF13401 AAA domain NU955_RS17605 PF11426 Tn7 transposition regulator TnsC NU955_RS17610 PF06527 TniQ NU955_RS17610 PF15978 Tn7-like transposition protein D NU955_RS17620 PF00145 C-5 cytosine-specific DNA methylase NU955_RS17635 PF01381 Helix-turn-helix NU955_RS17650 PF01177 Asp/Glu/Hydantoin racemase NU955_RS17665 PF00491 Arginase family NU955_RS17670 PF01979 Amidohydrolase family NU955_RS17675 PF00324 Amino acid permease NU955_RS17680 PF00221 Aromatic amino acid lyase NU955_RS17685 PF01175 Urocanase Rossmann-like domain NU955_RS17685 PF17392 Urocanase C-terminal domain NU955_RS17685 PF17391 Urocanase N-terminal domain NU955_RS17690 PF05962 HutD NU955_RS17695 PF00392 Bacterial regulatory proteins, gntR family NU955_RS17695 PF07702 UTRA domain NU955_RS17705 PF02492 CobW/HypB/UreG, nucleotide-binding domain NU955_RS17705 PF07683 Cobalamin synthesis protein cobW C-terminal domain NU955_RS17715 PF00324 Amino acid permease NU955_RS17725 PF14497 Glutathione S-transferase, C-terminal domain NU955_RS17725 PF02798 Glutathione S-transferase, N-terminal domain NU955_RS17730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NU955_RS17740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NU955_RS17745 PF04463 Protein of unknown function (DUF523) NU955_RS17750 PF01554 MatE NU955_RS17755 PF01758 Sodium Bile acid symporter family NU955_RS17760 PF00857 Isochorismatase family NU955_RS17765 PF00701 Dihydrodipicolinate synthetase family NU955_RS17775 PF01259 SAICAR synthetase NU955_RS17785 PF01226 Formate/nitrite transporter NU955_RS17790 PF16193 AAA C-terminal domain NU955_RS17790 PF12002 MgsA AAA+ ATPase C terminal NU955_RS17790 PF00004 ATPase family associated with various cellular activities (AAA) NU955_RS17795 PF07995 Glucose / Sorbosone dehydrogenase NU955_RS17800 PF03692 Putative zinc- or iron-chelating domain NU955_RS17805 PF07043 Protein of unknown function (DUF1328) NU955_RS17820 PF10576 Iron-sulfur binding domain of endonuclease III NU955_RS17820 PF00633 Helix-hairpin-helix motif NU955_RS17820 PF00730 HhH-GPD superfamily base excision DNA repair protein NU955_RS17820 PF14815 NUDIX domain NU955_RS17835 PF03352 Methyladenine glycosylase NU955_RS17840 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS17840 PF00107 Zinc-binding dehydrogenase NU955_RS17845 PF00155 Aminotransferase class I and II NU955_RS17845 PF00392 Bacterial regulatory proteins, gntR family NU955_RS17860 PF03466 LysR substrate binding domain NU955_RS17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS17865 PF00248 Aldo/keto reductase family NU955_RS17870 PF07690 Major Facilitator Superfamily NU955_RS17880 PF05173 Dihydrodipicolinate reductase, C-terminus NU955_RS17880 PF01113 Dihydrodipicolinate reductase, N-terminus NU955_RS17890 PF00226 DnaJ domain NU955_RS17890 PF00684 DnaJ central domain NU955_RS17890 PF01556 DnaJ C terminal domain NU955_RS17900 PF00873 AcrB/AcrD/AcrF family NU955_RS17905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS17910 PF08361 MAATS-type transcriptional repressor, C-terminal region NU955_RS17910 PF00440 Bacterial regulatory proteins, tetR family NU955_RS17915 PF00311 Phosphoenolpyruvate carboxylase NU955_RS17920 PF00860 Permease family NU955_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS17925 PF03466 LysR substrate binding domain NU955_RS17940 PF00920 Dehydratase family NU955_RS17945 PF02911 Formyl transferase, C-terminal domain NU955_RS17945 PF00551 Formyl transferase NU955_RS17950 PF01189 16S rRNA methyltransferase RsmB/F NU955_RS17950 PF01029 NusB family NU955_RS17960 PF00209 Sodium:neurotransmitter symporter family NU955_RS18000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NU955_RS18005 PF07859 alpha/beta hydrolase fold NU955_RS18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NU955_RS18025 PF03466 LysR substrate binding domain NU955_RS18030 PF01025 GrpE NU955_RS18035 PF00012 Hsp70 protein NU955_RS18060 PF13406 Transglycosylase SLT domain NU955_RS18065 PF02222 ATP-grasp domain NU955_RS18065 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NU955_RS18070 PF00731 AIR carboxylase NU955_RS18080 PF01225 Mur ligase family, catalytic domain NU955_RS18080 PF02875 Mur ligase family, glutamate ligase domain NU955_RS18080 PF08245 Mur ligase middle domain NU955_RS18090 PF01569 PAP2 superfamily NU955_RS18095 PF03741 Integral membrane protein TerC family NU955_RS18105 PF03738 Glutathionylspermidine synthase preATP-grasp NU955_RS18110 PF00355 Rieske [2Fe-2S] domain NU955_RS18115 PF01979 Amidohydrolase family NU955_RS18120 PF00156 Phosphoribosyl transferase domain NU955_RS18130 PF13098 Thioredoxin-like domain NU955_RS18130 PF10411 Disulfide bond isomerase protein N-terminus NU955_RS18135 PF01545 Cation efflux family NU955_RS18135 PF16916 Dimerisation domain of Zinc Transporter NU955_RS18140 PF02583 Metal-sensitive transcriptional repressor NU955_RS18145 PF10396 GTP-binding protein TrmE N-terminus NU955_RS18145 PF01926 50S ribosome-binding GTPase NU955_RS18145 PF12631 MnmE helical domain NU955_RS18150 PF14849 YidC periplasmic domain NU955_RS18150 PF02096 60Kd inner membrane protein NU955_RS18155 PF01809 Putative membrane protein insertion efficiency factor NU955_RS18160 PF00825 Ribonuclease P NU955_RS18165 PF00468 Ribosomal protein L34 NU955_RS18170 PF13614 AAA domain NU955_RS18175 PF02195 ParB-like nuclease domain NU955_RS18175 PF17762 HTH domain found in ParB protein NU955_RS18180 PF13737 Transposase DDE domain NU955_RS18330 PF05973 Phage derived protein Gp49-like (DUF891) NU955_RS18355 PF01381 Helix-turn-helix NU955_RS18360 PF05973 Phage derived protein Gp49-like (DUF891) NU955_RS18375 PF17755 UvrA DNA-binding domain NU955_RS18385 PF13823 Alcohol dehydrogenase GroES-associated NU955_RS18385 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS18385 PF00107 Zinc-binding dehydrogenase NU955_RS18395 PF00872 Transposase, Mutator family NU955_RS18400 PF13610 DDE domain NU955_RS18410 PF02583 Metal-sensitive transcriptional repressor NU955_RS18415 PF08240 Alcohol dehydrogenase GroES-like domain NU955_RS18415 PF00107 Zinc-binding dehydrogenase NU955_RS18420 PF00756 Putative esterase NU955_RS18430 PF00465 Iron-containing alcohol dehydrogenase NU955_RS18440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NU955_RS18450 PF16925 Tetracyclin repressor-like, C-terminal domain NU955_RS18450 PF00440 Bacterial regulatory proteins, tetR family NU955_RS18455 PF16884 N-terminal domain of oxidoreductase NU955_RS18455 PF00107 Zinc-binding dehydrogenase NU955_RS18465 PF04151 Bacterial pre-peptidase C-terminal domain NU955_RS18470 PF13356 Arm DNA-binding domain NU955_RS18470 PF00589 Phage integrase family NU955_RS18475 PF00872 Transposase, Mutator family NU955_RS18480 PF07733 Bacterial DNA polymerase III alpha NTPase domain NU955_RS18480 PF14579 Helix-hairpin-helix motif NU955_RS18480 PF02811 PHP domain NU955_RS18480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NU955_RS18515 PF02899 Phage integrase, N-terminal SAM-like domain NU955_RS18515 PF00589 Phage integrase family NU955_RS18525 PF07015 VirC1 protein NU955_RS18540 PF00625 Guanylate kinase NU955_RS18575 PF10410 DnaB-helicase binding domain of primase NU955_RS18575 PF08275 DNA primase catalytic core, N-terminal domain NU955_RS18575 PF01807 CHC2 zinc finger NU955_RS18700 PF17757 UvrB interaction domain NU955_RS18700 PF00270 DEAD/DEAH box helicase NU955_RS18700 PF00271 Helicase conserved C-terminal domain NU955_RS18700 PF03461 TRCF domain NU955_RS18700 PF02559 CarD-like/TRCF domain NU955_RS18715 PF02216 B domain NU955_RS18715 PF01476 LysM domain NU955_RS18715 PF03373 Octapeptide repeat NU955_RS18715 PF04650 YSIRK type signal peptide NU955_RS18715 PF00746 LPXTG cell wall anchor motif NU955_RS18775 PF00902 Sec-independent protein translocase protein (TatC) NU955_RS18780 PF02416 mttA/Hcf106 family NU955_RS18785 PF02416 mttA/Hcf106 family NU955_RS18815 PF13737 Transposase DDE domain NU955_RS18825 PF00011 Hsp20/alpha crystallin family NU955_RS18830 PF10431 C-terminal, D2-small domain, of ClpB protein NU955_RS18830 PF02861 Clp amino terminal domain, pathogenicity island component NU955_RS18830 PF17871 AAA lid domain NU955_RS18830 PF07724 AAA domain (Cdc48 subfamily) NU955_RS18830 PF00004 ATPase family associated with various cellular activities (AAA) NU955_RS18860 PF00085 Thioredoxin NU955_RS18865 PF02254 TrkA-N domain NU955_RS18865 PF02080 TrkA-C domain NU955_RS18865 PF00999 Sodium/hydrogen exchanger family NU955_RS18875 PF13180 PDZ domain NU955_RS18880 PF01435 Peptidase family M48 NU955_RS18900 PF13737 Transposase DDE domain NU955_RS18905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NU955_RS18915 PF00239 Resolvase, N terminal domain NU955_RS18915 PF02796 Helix-turn-helix domain of resolvase NU955_RS18930 PF00529 HlyD membrane-fusion protein of T1SS NU955_RS18930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NU955_RS18935 PF00873 AcrB/AcrD/AcrF family NU955_RS18940 PF07690 Major Facilitator Superfamily NU955_RS18945 PF00672 HAMP domain NU955_RS18945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NU955_RS18945 PF18698 Histidine kinase sensor domain NU955_RS18945 PF00512 His Kinase A (phospho-acceptor) domain NU955_RS18945 PF00989 PAS fold NU955_RS18950 PF00072 Response regulator receiver domain NU955_RS18950 PF00486 Transcriptional regulatory protein, C terminal NU955_RS18965 PF01636 Phosphotransferase enzyme family NU955_RS18970 PF00005 ABC transporter NU955_RS18970 PF12848 ABC transporter NU955_RS18975 PF04221 RelB antitoxin NU955_RS18985 PF13610 DDE domain NU955_RS18995 PF13610 DDE domain NU955_RS19045 PF01734 Patatin-like phospholipase NU955_RS19070 PF00589 Phage integrase family NU955_RS19070 PF13356 Arm DNA-binding domain NU955_RS19095 PF01726 LexA DNA binding domain NU955_RS19095 PF00717 Peptidase S24-like NU955_RS19100 PF11798 IMS family HHH motif NU955_RS19100 PF11799 impB/mucB/samB family C-terminal domain NU955_RS19100 PF00817 impB/mucB/samB family NU955_RS19100 PF13438 Domain of unknown function (DUF4113) NU955_RS19135 PF02661 Fic/DOC family NU955_RS19160 PF13610 DDE domain NU955_RS19170 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NU955_RS19175 PF01636 Phosphotransferase enzyme family NU955_RS19185 PF13700 Domain of unknown function (DUF4158) NU955_RS19185 PF01526 Tn3 transposase DDE domain NU955_RS19195 PF02332 Methane/Phenol/Toluene Hydroxylase NU955_RS19205 PF00809 Pterin binding enzyme NU955_RS19220 PF13610 DDE domain NU955_RS19225 PF02796 Helix-turn-helix domain of resolvase NU955_RS19225 PF00239 Resolvase, N terminal domain NU955_RS19235 PF07669 Eco57I restriction-modification methylase NU955_RS19240 PF02384 N-6 DNA Methylase NU955_RS19250 PF00717 Peptidase S24-like NU955_RS19290 PF02522 Aminoglycoside 3-N-acetyltransferase NU955_RS19295 PF13610 DDE domain NU955_RS19305 PF12833 Helix-turn-helix domain NU955_RS19335 PF00313 'Cold-shock' DNA-binding domain NU955_RS19355 PF01051 Initiator Replication protein NU955_RS19380 PF00905 Penicillin binding protein transpeptidase domain NU955_RS19390 PF12833 Helix-turn-helix domain NU955_RS19405 PF00905 Penicillin binding protein transpeptidase domain NU955_RS19415 PF12833 Helix-turn-helix domain NU955_RS19430 PF00905 Penicillin binding protein transpeptidase domain NU955_RS19440 PF12833 Helix-turn-helix domain NU955_RS19455 PF00905 Penicillin binding protein transpeptidase domain NU955_RS19465 PF12833 Helix-turn-helix domain NU955_RS19480 PF00905 Penicillin binding protein transpeptidase domain NU955_RS19490 PF12833 Helix-turn-helix domain NU955_RS19505 PF00905 Penicillin binding protein transpeptidase domain