locus-tag	class	description
NU955_RS00010	COG0592	DNA-directed DNA polymerase activity
NU955_RS00020	COG0187	DNA topoisomerase II activity
NU955_RS00030	COG0586	Pfam SNARE associated Golgi protein
NU955_RS00035	COG0488	(ABC) transporter
NU955_RS00060	COG0596	Alpha beta hydrolase
NU955_RS00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
NU955_RS00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NU955_RS00110	COG1047	Peptidyl-prolyl cis-trans
NU955_RS00120	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NU955_RS00125	COG0196	riboflavin kinase activity
NU955_RS00135	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NU955_RS00140	COG1309	transcriptional regulator
NU955_RS00145	COG1116	anion transmembrane transporter activity
NU955_RS00150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NU955_RS00155	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NU955_RS00160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NU955_RS00165	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NU955_RS00185	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS00190	COG0546	phosphoglycolate phosphatase activity
NU955_RS00250	COG3023	N-Acetylmuramoyl-L-alanine amidase
NU955_RS00255	COG0728	peptidoglycan biosynthetic process
NU955_RS00280	COG1596	polysaccharide export
NU955_RS00285	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
NU955_RS00295	COG1091	dTDP-4-dehydrorhamnose reductase activity
NU955_RS00300	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NU955_RS00325	COG0463	Glycosyl transferase, family 2
NU955_RS00325	COG1216	Glycosyl transferase, family 2
NU955_RS00330	COG0110	maltose O-acetyltransferase activity
NU955_RS00345	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NU955_RS00350	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NU955_RS00370	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NU955_RS00380	COG2186	Transcriptional regulator
NU955_RS00390	COG0277	FAD linked oxidase domain protein
NU955_RS00395	COG1448	Aminotransferase
NU955_RS00400	COG1802	Transcriptional regulator
NU955_RS00415	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NU955_RS00445	COG0564	pseudouridine synthase activity
NU955_RS00485	COG0251	oxidation-reduction process
NU955_RS00490	COG1113	amino acid transport
NU955_RS00495	COG1113	amino acid transport
NU955_RS00515	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NU955_RS00520	COG1960	acyl-CoA dehydrogenase activity
NU955_RS00525	COG1024	Enoyl-CoA hydratase
NU955_RS00530	COG1024	Enoyl-CoA hydratase
NU955_RS00535	COG0477	Major facilitator Superfamily
NU955_RS00540	COG3916	Acyl-homoserine-lactone synthase
NU955_RS00550	COG2197	response regulator
NU955_RS00560	COG1960	acyl-CoA dehydrogenase activity
NU955_RS00565	COG3321	synthase
NU955_RS00565	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
NU955_RS00565	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NU955_RS00565	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NU955_RS00585	COG2267	carboxylic ester hydrolase activity
NU955_RS00605	COG0271	Belongs to the BolA IbaG family
NU955_RS00615	COG1192	Involved in chromosome partitioning
NU955_RS00630	COG0586	Pfam SNARE associated Golgi protein
NU955_RS00635	COG2259	Doxx family
NU955_RS00640	COG4399	Belongs to the UPF0754 family
NU955_RS00645	COG0519	Catalyzes the synthesis of GMP from XMP
NU955_RS00645	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NU955_RS00690	COG0281	malic enzyme
NU955_RS00695	COG2837	iron assimilation
NU955_RS00700	COG1280	lysine exporter protein (LysE YggA)
NU955_RS00705	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NU955_RS00710	COG1121	(ABC) transporter
NU955_RS00775	COG0386	Belongs to the glutathione peroxidase family
NU955_RS00790	COG1309	transcriptional regulator
NU955_RS00795	COG0697	spore germination
NU955_RS00805	COG0758	DNA mediated transformation
NU955_RS00875	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NU955_RS00885	COG0655	NAD(P)H dehydrogenase (quinone) activity
NU955_RS00925	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NU955_RS00935	COG0477	Major facilitator Superfamily
NU955_RS00945	COG1253	flavin adenine dinucleotide binding
NU955_RS00950	COG3012	SEC-C Motif Domain Protein
NU955_RS00955	COG2860	membrane
NU955_RS00960	COG0477	Major facilitator Superfamily
NU955_RS00970	COG0318	PFAM AMP-dependent synthetase and ligase
NU955_RS00985	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NU955_RS01005	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NU955_RS01060	COG0589	response to stress
NU955_RS01065	COG0659	secondary active sulfate transmembrane transporter activity
NU955_RS01085	COG0347	Belongs to the P(II) protein family
NU955_RS01090	COG0004	ammonium transporteR
NU955_RS01100	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NU955_RS01100	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NU955_RS01140	COG0795	lipopolysaccharide-transporting ATPase activity
NU955_RS01145	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NU955_RS01150	COG0793	Belongs to the peptidase S41A family
NU955_RS01165	COG2197	response regulator
NU955_RS01175	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NU955_RS01185	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NU955_RS01190	COG4974	Belongs to the 'phage' integrase family
NU955_RS01215	COG0772	Belongs to the SEDS family
NU955_RS01220	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NU955_RS01225	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NU955_RS01230	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NU955_RS01255	COG0697	spore germination
NU955_RS01260	COG1538	Outer membrane efflux protein
NU955_RS01280	COG3275	phosphorelay sensor kinase activity
NU955_RS01290	COG0181	hydroxymethylbilane synthase activity
NU955_RS01335	COG1716	ATPase activity
NU955_RS01340	COG0546	phosphoglycolate phosphatase activity
NU955_RS01435	COG0596	Alpha beta hydrolase
NU955_RS01440	COG2056	Na+-H+ antiporter family
NU955_RS01455	COG0326	Molecular chaperone. Has ATPase activity
NU955_RS01470	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NU955_RS01540	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NU955_RS01575	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NU955_RS01585	COG0497	DNA recombination
NU955_RS01600	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NU955_RS01610	COG0237	dephospho-CoA kinase activity
NU955_RS01660	COG0195	Participates in both transcription termination and antitermination
NU955_RS01675	COG1320	monovalent cation:proton antiporter activity
NU955_RS01680	COG2212	antiporter activity
NU955_RS01685	COG1863	multisubunit Na H antiporter MnhE subunit
NU955_RS01690	COG0651	ATP synthesis coupled electron transport
NU955_RS01695	COG1006	Multisubunit Na H antiporter MnhC subunit
NU955_RS01700	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NU955_RS01700	COG2111	Na H antiporter
NU955_RS01715	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NU955_RS01745	COG2226	methyltransferase
NU955_RS01765	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NU955_RS01770	COG1074	ATP-dependent DNA helicase activity
NU955_RS01775	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NU955_RS01780	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NU955_RS01795	COG0598	Magnesium transport protein CorA
NU955_RS01800	COG0789	Transcriptional regulator
NU955_RS01805	COG0484	heat shock protein binding
NU955_RS01820	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NU955_RS01820	COG0475	glutathione-regulated potassium exporter activity
NU955_RS01825	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NU955_RS01845	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NU955_RS01855	COG4535	Mg2 and Co2 transporter CorC
NU955_RS01860	COG0425	Belongs to the sulfur carrier protein TusA family
NU955_RS01870	COG0644	oxidoreductase
NU955_RS01870	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
NU955_RS01880	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NU955_RS01895	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NU955_RS01900	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
NU955_RS01910	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
NU955_RS01910	COG0493	'glutamate synthase
NU955_RS01935	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NU955_RS01950	COG0534	Mate efflux family protein
NU955_RS01960	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NU955_RS01965	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS01970	COG0583	DNA-binding transcription factor activity
NU955_RS01985	COG0318	PFAM AMP-dependent synthetase and ligase
NU955_RS01990	COG1530	ribonuclease E activity
NU955_RS02000	COG0546	phosphoglycolate phosphatase activity
NU955_RS02005	COG2378	regulation of single-species biofilm formation
NU955_RS02010	COG0625	glutathione transferase activity
NU955_RS02020	COG0583	DNA-binding transcription factor activity
NU955_RS02085	COG0473	3-isopropylmalate dehydrogenase activity
NU955_RS02140	COG1301	dicarboxylic acid transport
NU955_RS02150	COG1560	Kdo2-lipid A biosynthetic process
NU955_RS02155	COG1280	lysine exporter protein (LysE YggA)
NU955_RS02165	COG0488	(ABC) transporter
NU955_RS02170	COG2900	Belongs to the SlyX family
NU955_RS02180	COG1733	regulation of RNA biosynthetic process
NU955_RS02205	COG0210	DNA helicase
NU955_RS02210	COG0724	RNA recognition motif
NU955_RS02230	COG4651	solute:proton antiporter activity
NU955_RS02230	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NU955_RS02255	COG0788	formyltetrahydrofolate deformylase activity
NU955_RS02355	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NU955_RS02355	COG2813	Specifically methylates the guanine in position
NU955_RS02365	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NU955_RS02375	COG4774	siderophore transport
NU955_RS02385	COG0740	serine-type endopeptidase activity
NU955_RS02405	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
NU955_RS02405	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
NU955_RS02410	COG0280	phosphate acetyltransferase
NU955_RS02410	COG0857	belongs to the CobB CobQ family
NU955_RS02415	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NU955_RS02425	COG0800	Aldolase
NU955_RS02435	COG3265	gluconokinase activity
NU955_RS02440	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS02450	COG2267	carboxylic ester hydrolase activity
NU955_RS02465	COG0793	Belongs to the peptidase S41A family
NU955_RS02500	COG1426	Protein conserved in bacteria
NU955_RS02520	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NU955_RS02540	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
NU955_RS02550	COG1162	GTPase activity
NU955_RS02555	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NU955_RS02570	COG1538	Outer membrane efflux protein
NU955_RS02575	COG1136	(ABC) transporter
NU955_RS02575	COG0577	efflux transmembrane transporter activity
NU955_RS02580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NU955_RS02605	COG0028	Belongs to the TPP enzyme family
NU955_RS02610	COG0440	acetolactate synthase activity
NU955_RS02640	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NU955_RS02655	COG0084	hydrolase, TatD family'
NU955_RS02670	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NU955_RS02680	COG0583	DNA-binding transcription factor activity
NU955_RS02690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NU955_RS02730	COG2205	protein histidine kinase activity
NU955_RS02745	COG2132	Multicopper oxidase
NU955_RS02755	COG3328	transposase activity
NU955_RS02775	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NU955_RS02810	COG0640	Transcriptional regulator
NU955_RS02820	COG0798	PFAM Bile acid sodium symporter
NU955_RS02825	COG0431	NADPH-dependent FMN reductase
NU955_RS02830	COG0492	ferredoxin-NADP+ reductase activity
NU955_RS02835	COG2072	flavoprotein involved in K transport
NU955_RS02870	COG1358	cellular component organization or biogenesis
NU955_RS02915	COG2814	Major facilitator Superfamily
NU955_RS02925	COG0697	spore germination
NU955_RS02955	COG3622	Belongs to the hyi family
NU955_RS02960	COG2084	Dehydrogenase
NU955_RS02965	COG1024	Enoyl-CoA hydratase
NU955_RS02970	COG5002	protein histidine kinase activity
NU955_RS02970	COG2205	protein histidine kinase activity
NU955_RS02970	COG0784	Response regulator, receiver
NU955_RS02990	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NU955_RS03000	COG3956	TIGRFAM MazG family protein
NU955_RS03005	COG1555	photosystem II stabilization
NU955_RS03010	COG0617	tRNA 3'-terminal CCA addition
NU955_RS03015	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NU955_RS03035	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NU955_RS03040	COG3028	Belongs to the UPF0307 family
NU955_RS03045	COG0318	PFAM AMP-dependent synthetase and ligase
NU955_RS03060	COG0625	glutathione transferase activity
NU955_RS03065	COG1238	metal cluster binding
NU955_RS03110	COG0072	phenylalanine-tRNA ligase activity
NU955_RS03140	COG0248	Ppx GppA phosphatase
NU955_RS03150	COG0037	tRNA processing
NU955_RS03190	COG1764	response to oxidative stress
NU955_RS03195	COG1846	Transcriptional regulator
NU955_RS03205	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NU955_RS03265	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NU955_RS03270	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NU955_RS03275	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NU955_RS03335	COG1214	PFAM Peptidase M22, glycoprotease
NU955_RS03350	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
NU955_RS03360	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NU955_RS03365	COG0561	phosphatase activity
NU955_RS03375	COG2132	Multicopper oxidase
NU955_RS03380	COG3667	copper resistance
NU955_RS03395	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NU955_RS03400	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NU955_RS03405	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NU955_RS03435	COG1063	alcohol dehydrogenase
NU955_RS03440	COG0583	DNA-binding transcription factor activity
NU955_RS03445	COG1960	acyl-CoA dehydrogenase activity
NU955_RS03450	COG2814	Major facilitator Superfamily
NU955_RS03455	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NU955_RS03460	COG1309	transcriptional regulator
NU955_RS03475	COG1053	succinate dehydrogenase
NU955_RS03480	COG0583	DNA-binding transcription factor activity
NU955_RS03495	COG0583	DNA-binding transcription factor activity
NU955_RS03525	COG0583	DNA-binding transcription factor activity
NU955_RS03540	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NU955_RS03600	COG0384	phenazine biosynthesis protein PhzF
NU955_RS03615	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NU955_RS03635	COG0745	RESPONSE REGULATOR receiver
NU955_RS03675	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
NU955_RS03705	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NU955_RS03710	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NU955_RS03730	COG0583	DNA-binding transcription factor activity
NU955_RS03750	COG0668	transmembrane transport
NU955_RS03760	COG2081	HI0933 family
NU955_RS03765	COG2515	1-aminocyclopropane-1-carboxylate deaminase
NU955_RS03795	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NU955_RS03795	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NU955_RS03805	COG0489	protein tyrosine kinase activity
NU955_RS03855	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NU955_RS03865	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NU955_RS03880	COG0730	response to heat
NU955_RS03890	COG1196	nuclear chromosome segregation
NU955_RS03910	COG2223	nitrite transmembrane transporter activity
NU955_RS03915	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
NU955_RS03920	COG1877	trehalose-phosphatase activity
NU955_RS03925	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NU955_RS03925	COG2226	methyltransferase
NU955_RS03925	COG0596	Alpha beta hydrolase
NU955_RS03940	COG4106	trans-aconitate 2-methyltransferase activity
NU955_RS03955	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NU955_RS03960	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NU955_RS03965	COG0009	L-threonylcarbamoyladenylate synthase
NU955_RS03970	COG3101	peptidyl-lysine hydroxylation
NU955_RS03975	COG1399	metal-binding, possibly nucleic acid-binding protein
NU955_RS04000	COG1652	LysM domain
NU955_RS04005	COG0351	phosphomethylpyrimidine kinase
NU955_RS04005	COG0352	thiamine-phosphate diphosphorylase activity
NU955_RS04005	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NU955_RS04015	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NU955_RS04045	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NU955_RS04075	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NU955_RS04090	COG0358	DNA primase activity
NU955_RS04100	COG0564	pseudouridine synthase activity
NU955_RS04125	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NU955_RS04145	COG0583	DNA-binding transcription factor activity
NU955_RS04150	COG0473	3-isopropylmalate dehydrogenase activity
NU955_RS04160	COG0657	acetylesterase activity
NU955_RS04170	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS04190	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NU955_RS04190	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NU955_RS04205	COG1981	membrane
NU955_RS04250	COG0456	acetyltransferase
NU955_RS04260	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
NU955_RS04265	COG0492	ferredoxin-NADP+ reductase activity
NU955_RS04270	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NU955_RS04270	COG1674	ftsk spoiiie
NU955_RS04275	COG1280	lysine exporter protein (LysE YggA)
NU955_RS04290	COG2894	cell division
NU955_RS04305	COG0204	Acyl-transferase
NU955_RS04310	COG2885	chlorophyll binding
NU955_RS04315	COG0210	DNA helicase
NU955_RS04325	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NU955_RS04340	COG0121	glutamine amidotransferase
NU955_RS04360	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NU955_RS04365	COG0735	belongs to the Fur family
NU955_RS04390	COG0420	3'-5' exonuclease activity
NU955_RS04410	COG1090	epimerase
NU955_RS04425	COG2050	protein possibly involved in aromatic compounds catabolism
NU955_RS04435	COG2814	Major facilitator Superfamily
NU955_RS04440	COG0405	Gamma-glutamyltransferase
NU955_RS04480	COG1396	sequence-specific DNA binding
NU955_RS04510	COG0477	Major facilitator Superfamily
NU955_RS04515	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NU955_RS04540	COG0531	amino acid
NU955_RS04545	COG2040	homocysteine
NU955_RS04570	COG1309	transcriptional regulator
NU955_RS04575	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NU955_RS04580	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NU955_RS04590	COG1607	acyl-coa hydrolase
NU955_RS04600	COG0523	cobalamin synthesis protein
NU955_RS04610	COG4681	YaeQ
NU955_RS04620	COG1649	PFAM Uncharacterised BCR, COG1649
NU955_RS04620	COG0726	polysaccharide deacetylase
NU955_RS04625	COG1215	transferase activity, transferring glycosyl groups
NU955_RS04635	COG1024	Enoyl-CoA hydratase
NU955_RS04650	COG1414	Transcriptional regulator
NU955_RS04670	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS04680	COG0446	pyridine nucleotide-disulphide oxidoreductase
NU955_RS04685	COG2271	Major facilitator Superfamily
NU955_RS04695	COG2267	carboxylic ester hydrolase activity
NU955_RS04700	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS04715	COG0028	Belongs to the TPP enzyme family
NU955_RS04725	COG0477	Major facilitator Superfamily
NU955_RS04730	COG0242	peptide deformylase activity
NU955_RS04735	COG2066	Belongs to the glutaminase family
NU955_RS04740	COG2207	Transcriptional regulator
NU955_RS04745	COG2223	nitrite transmembrane transporter activity
NU955_RS04760	COG0583	DNA-binding transcription factor activity
NU955_RS04765	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS04770	COG2271	Major facilitator Superfamily
NU955_RS04775	COG3959	Transketolase, thiamine diphosphate binding domain
NU955_RS04780	COG3958	Transketolase
NU955_RS04820	COG0306	phosphate transporter
NU955_RS04840	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NU955_RS04860	COG4771	TonB-dependent receptor
NU955_RS04885	COG4181	ATPase activity
NU955_RS04890	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
NU955_RS04920	COG0583	DNA-binding transcription factor activity
NU955_RS04930	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NU955_RS04935	COG1773	rubredoxin
NU955_RS04985	COG2851	Citrate transporter
NU955_RS04990	COG1253	flavin adenine dinucleotide binding
NU955_RS05030	COG0804	urea catabolic process
NU955_RS05040	COG0830	nickel cation binding
NU955_RS05055	COG0742	ribosomal rna small subunit methyltransferase
NU955_RS05060	COG0768	penicillin binding
NU955_RS05085	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NU955_RS05090	COG2878	Part of a membrane complex involved in electron transport
NU955_RS05095	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NU955_RS05105	COG3384	dioxygenase
NU955_RS05130	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NU955_RS05170	COG0006	proline dipeptidase activity
NU955_RS05175	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NU955_RS05180	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NU955_RS05200	COG1279	arginine transmembrane transporter activity
NU955_RS05205	COG0583	DNA-binding transcription factor activity
NU955_RS05245	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NU955_RS05250	COG0741	lytic transglycosylase activity
NU955_RS05250	COG0741	lytic transglycosylase activity
NU955_RS05250	COG1388	LysM domain
NU955_RS05250	COG1388	LysM domain
NU955_RS05260	COG4174	ABC transporter (Permease)
NU955_RS05265	COG4239	(ABC) transporter, permease
NU955_RS05270	COG4172	Belongs to the ABC transporter superfamily
NU955_RS05290	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NU955_RS05300	COG2203	Gaf domain
NU955_RS05300	COG3706	GGDEF domain
NU955_RS05300	COG4251	negative regulation of phosphorylation
NU955_RS05300	COG5001	Diguanylate cyclase
NU955_RS05310	COG0446	pyridine nucleotide-disulphide oxidoreductase
NU955_RS05310	COG1902	pentaerythritol trinitrate reductase activity
NU955_RS05320	COG0457	Tetratricopeptide repeat
NU955_RS05330	COG0251	oxidation-reduction process
NU955_RS05340	COG0583	DNA-binding transcription factor activity
NU955_RS05370	COG3209	COG3209 Rhs family protein
NU955_RS05440	COG1113	amino acid transport
NU955_RS05450	COG0531	amino acid
NU955_RS05470	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS05490	COG1113	amino acid transport
NU955_RS05505	COG0697	spore germination
NU955_RS05510	COG2721	sulfolactate sulfo-lyase activity
NU955_RS05515	COG2271	Major facilitator Superfamily
NU955_RS05520	COG4948	Mandelate Racemase Muconate Lactonizing
NU955_RS05530	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS05535	COG2186	Transcriptional regulator
NU955_RS05560	COG1960	acyl-CoA dehydrogenase activity
NU955_RS05570	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS05575	COG1024	Enoyl-CoA hydratase
NU955_RS05580	COG2814	Major facilitator Superfamily
NU955_RS05595	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NU955_RS05610	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NU955_RS05650	COG2207	Transcriptional regulator
NU955_RS05655	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NU955_RS05660	COG2072	flavoprotein involved in K transport
NU955_RS05665	COG0300	oxidoreductase activity
NU955_RS05675	COG1309	transcriptional regulator
NU955_RS05680	COG1741	Belongs to the pirin family
NU955_RS05695	COG2072	flavoprotein involved in K transport
NU955_RS05705	COG2252	PERMEase
NU955_RS05710	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NU955_RS05720	COG3038	cytochrome b561
NU955_RS05730	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NU955_RS05740	COG0527	aspartate kinase activity
NU955_RS05880	COG5410	chromosome segregation
NU955_RS05885	COG3567	Phage-associated protein, HI1409 family
NU955_RS05900	COG3566	protein conserved in bacteria
NU955_RS05960	COG2314	TM2 domain
NU955_RS05985	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NU955_RS06015	COG2194	sulfuric ester hydrolase activity
NU955_RS06020	COG0582	viral genome integration into host DNA
NU955_RS06040	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NU955_RS06055	COG0667	Aldo Keto reductase
NU955_RS06070	COG1765	OsmC-like protein
NU955_RS06085	COG0542	response to heat
NU955_RS06120	COG2885	chlorophyll binding
NU955_RS06130	COG0625	glutathione transferase activity
NU955_RS06135	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NU955_RS06155	COG3634	alkyl hydroperoxide reductase activity
NU955_RS06165	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NU955_RS06180	COG1643	Atp-dependent helicase
NU955_RS06195	COG2814	Major facilitator Superfamily
NU955_RS06200	COG3135	benzoate transporter
NU955_RS06205	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS06210	COG0633	Ferredoxin
NU955_RS06210	COG0543	2 iron, 2 sulfur cluster binding
NU955_RS06220	COG4638	Rieske (2fe-2S)
NU955_RS06230	COG0583	DNA-binding transcription factor activity
NU955_RS06280	COG1570	exodeoxyribonuclease VII activity
NU955_RS06310	COG1280	lysine exporter protein (LysE YggA)
NU955_RS06315	COG1278	Cold shock
NU955_RS06350	COG2814	Major facilitator Superfamily
NU955_RS06620	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NU955_RS06620	COG0517	IMP dehydrogenase activity
NU955_RS06625	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NU955_RS06635	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
NU955_RS06640	COG1137	ATPase activity
NU955_RS06645	COG1538	Outer membrane efflux protein
NU955_RS06675	COG4122	O-methyltransferase activity
NU955_RS06685	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NU955_RS06700	COG1522	sequence-specific DNA binding
NU955_RS06705	COG5006	permease, DMT superfamily
NU955_RS06715	COG1560	Kdo2-lipid A biosynthetic process
NU955_RS06730	COG2814	Major facilitator Superfamily
NU955_RS06750	COG1250	3-hydroxyacyl-CoA dehydrogenase
NU955_RS06885	COG0583	DNA-binding transcription factor activity
NU955_RS06890	COG1914	H( )-stimulated, divalent metal cation uptake system
NU955_RS06910	COG4770	biotin carboxylase activity
NU955_RS06915	COG0038	chloride channel
NU955_RS06920	COG2831	hemolysin activation secretion protein
NU955_RS06925	COG3210	domain, Protein
NU955_RS06950	COG2801	Transposase and inactivated derivatives
NU955_RS06985	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NU955_RS06990	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NU955_RS06995	COG2271	Major facilitator Superfamily
NU955_RS07000	COG0753	catalase activity
NU955_RS07005	COG3038	cytochrome b561
NU955_RS07025	COG2267	carboxylic ester hydrolase activity
NU955_RS07030	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NU955_RS07035	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NU955_RS07040	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS07050	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NU955_RS07060	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS07065	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NU955_RS07070	COG0583	DNA-binding transcription factor activity
NU955_RS07080	COG1414	Transcriptional regulator
NU955_RS07085	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NU955_RS07095	COG1840	ABC-type Fe3 transport system, periplasmic component
NU955_RS07100	COG3842	ATPase activity
NU955_RS07115	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NU955_RS07120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NU955_RS07125	COG2814	Major facilitator Superfamily
NU955_RS07130	COG1960	acyl-CoA dehydrogenase activity
NU955_RS07145	COG1024	Enoyl-CoA hydratase
NU955_RS07155	COG2814	Major facilitator Superfamily
NU955_RS07165	COG0183	Belongs to the thiolase family
NU955_RS07170	COG1250	3-hydroxyacyl-CoA dehydrogenase
NU955_RS07175	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS07180	COG1024	Enoyl-CoA hydratase
NU955_RS07185	COG1960	acyl-CoA dehydrogenase activity
NU955_RS07190	COG2814	Major facilitator Superfamily
NU955_RS07195	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NU955_RS07200	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NU955_RS07210	COG2814	Major facilitator Superfamily
NU955_RS07220	COG1960	acyl-CoA dehydrogenase activity
NU955_RS07235	COG0583	DNA-binding transcription factor activity
NU955_RS07245	COG4770	biotin carboxylase activity
NU955_RS07250	COG1024	Enoyl-CoA hydratase
NU955_RS07255	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NU955_RS07260	COG1960	acyl-CoA dehydrogenase activity
NU955_RS07265	COG1309	transcriptional regulator
NU955_RS07270	COG0318	PFAM AMP-dependent synthetase and ligase
NU955_RS07290	COG0583	DNA-binding transcription factor activity
NU955_RS07305	COG2801	Transposase and inactivated derivatives
NU955_RS07370	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NU955_RS07390	COG0784	Response regulator, receiver
NU955_RS07390	COG2205	protein histidine kinase activity
NU955_RS07410	COG0765	amino acid transport
NU955_RS07415	COG0765	amino acid transport
NU955_RS07420	COG1126	abc transporter atp-binding protein
NU955_RS07425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NU955_RS07430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NU955_RS07445	COG1280	lysine exporter protein (LysE YggA)
NU955_RS07450	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NU955_RS07460	COG1045	serine acetyltransferase
NU955_RS07475	COG0583	DNA-binding transcription factor activity
NU955_RS07480	COG0625	glutathione transferase activity
NU955_RS07485	COG0625	glutathione transferase activity
NU955_RS07490	COG0583	DNA-binding transcription factor activity
NU955_RS07500	COG1346	cytolysis
NU955_RS07520	COG2814	Major facilitator Superfamily
NU955_RS07530	COG0583	DNA-binding transcription factor activity
NU955_RS07540	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
NU955_RS07545	COG3052	prosthetic group binding
NU955_RS07565	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
NU955_RS07585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NU955_RS07595	COG1294	oxidase, subunit
NU955_RS07600	COG1271	oxidase subunit
NU955_RS07620	COG0477	Major facilitator Superfamily
NU955_RS07630	COG4521	taurine ABC transporter
NU955_RS07635	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
NU955_RS07640	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NU955_RS07645	COG2175	clavaminate synthase activity
NU955_RS07655	COG1953	Uracil, thiamine, allantoin
NU955_RS07665	COG0583	DNA-binding transcription factor activity
NU955_RS07675	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
NU955_RS07690	COG0640	Transcriptional regulator
NU955_RS07695	COG0798	PFAM Bile acid sodium symporter
NU955_RS07700	COG0583	DNA-binding transcription factor activity
NU955_RS07715	COG3634	alkyl hydroperoxide reductase activity
NU955_RS07755	COG0436	Aminotransferase
NU955_RS07765	COG0386	Belongs to the glutathione peroxidase family
NU955_RS07805	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
NU955_RS07830	COG0012	GTP binding
NU955_RS07835	COG2011	ABC-type metal ion transport system permease component
NU955_RS07840	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NU955_RS07850	COG1464	Belongs to the NlpA lipoprotein family
NU955_RS07880	COG0765	amino acid transport
NU955_RS07885	COG0765	amino acid transport
NU955_RS07890	COG1126	abc transporter atp-binding protein
NU955_RS07900	COG1522	sequence-specific DNA binding
NU955_RS07915	COG1309	transcriptional regulator
NU955_RS07935	COG0583	DNA-binding transcription factor activity
NU955_RS07945	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NU955_RS07955	COG0697	spore germination
NU955_RS07990	COG3121	Chaperone
NU955_RS07995	COG3539	Fimbrial protein
NU955_RS08020	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NU955_RS08020	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NU955_RS08065	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NU955_RS08075	COG2353	YceI-like domain
NU955_RS08085	COG3698	Phosphodiester glycosidase
NU955_RS08100	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NU955_RS08105	COG0506	proline dehydrogenase activity
NU955_RS08105	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NU955_RS08105	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NU955_RS08115	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NU955_RS08120	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NU955_RS08140	COG1132	(ABC) transporter
NU955_RS08145	COG3122	Protein conserved in bacteria
NU955_RS08150	COG3619	membrane
NU955_RS08160	COG0640	Transcriptional regulator
NU955_RS08170	COG2850	peptidyl-arginine hydroxylation
NU955_RS08175	COG0424	maF-like protein
NU955_RS08195	COG0191	fructose-bisphosphate aldolase activity
NU955_RS08200	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NU955_RS08215	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NU955_RS08225	COG1192	Involved in chromosome partitioning
NU955_RS08230	COG1475	DNA binding
NU955_RS08235	COG0811	peptide transport
NU955_RS08245	COG1132	(ABC) transporter
NU955_RS08250	COG1663	tetraacyldisaccharide 4'-kinase activity
NU955_RS08270	COG0084	hydrolase, TatD family'
NU955_RS08335	COG0776	regulation of translation
NU955_RS08365	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NU955_RS08370	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NU955_RS08410	COG0339	signal peptide processing
NU955_RS08420	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NU955_RS08455	COG0702	epimerase
NU955_RS08460	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NU955_RS08480	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NU955_RS08510	COG0316	Belongs to the HesB IscA family
NU955_RS08515	COG0822	iron-sulfur transferase activity
NU955_RS08540	COG0776	regulation of translation
NU955_RS08545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NU955_RS08550	COG2207	Transcriptional regulator
NU955_RS08555	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NU955_RS08560	COG1960	acyl-CoA dehydrogenase activity
NU955_RS08580	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NU955_RS08600	COG4264	IucA IucC family
NU955_RS08605	COG4264	IucA IucC family
NU955_RS08615	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NU955_RS08645	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NU955_RS08660	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
NU955_RS08665	COG0406	alpha-ribazole phosphatase activity
NU955_RS08680	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NU955_RS08685	COG0730	response to heat
NU955_RS08705	COG4773	Receptor
NU955_RS08710	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NU955_RS08725	COG1131	(ABC) transporter
NU955_RS08730	COG0842	Transport permease protein
NU955_RS08735	COG0842	Transport permease protein
NU955_RS08790	COG2226	methyltransferase
NU955_RS08815	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NU955_RS08850	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NU955_RS08860	COG0133	tryptophan synthase activity
NU955_RS08875	COG3706	GGDEF domain
NU955_RS08890	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NU955_RS08895	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NU955_RS08900	COG0022	dehydrogenase e1 component
NU955_RS08905	COG0508	dehydrogenase complex catalyzes the overall conversion of
NU955_RS08910	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NU955_RS08920	COG1063	alcohol dehydrogenase
NU955_RS08925	COG3781	membrane
NU955_RS08935	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NU955_RS08935	COG3453	Protein conserved in bacteria
NU955_RS08950	COG0730	response to heat
NU955_RS08965	COG2207	Transcriptional regulator
NU955_RS08965	COG3708	Transcriptional regulator
NU955_RS08970	COG1733	regulation of RNA biosynthetic process
NU955_RS08975	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NU955_RS08985	COG2188	Transcriptional regulator
NU955_RS09000	COG4521	taurine ABC transporter
NU955_RS09005	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NU955_RS09025	COG0477	Major facilitator Superfamily
NU955_RS09035	COG1027	Aspartate ammonia-lyase
NU955_RS09050	COG0583	DNA-binding transcription factor activity
NU955_RS09055	COG0583	DNA-binding transcription factor activity
NU955_RS09060	COG0183	Belongs to the thiolase family
NU955_RS09065	COG2031	fatty acid transporter
NU955_RS09080	COG0583	DNA-binding transcription factor activity
NU955_RS09090	COG2610	gluconate transmembrane transporter activity
NU955_RS09095	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS09100	COG2207	Transcriptional regulator
NU955_RS09115	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS09125	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NU955_RS09140	COG0543	2 iron, 2 sulfur cluster binding
NU955_RS09140	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NU955_RS09145	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NU955_RS09150	COG4638	Rieske (2fe-2S)
NU955_RS09160	COG0725	ABC transporter, periplasmic molybdate-binding protein
NU955_RS09165	COG4149	molybdate abc transporter
NU955_RS09170	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
NU955_RS09175	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS09180	COG1535	isochorismatase
NU955_RS09180	COG3433	isochorismatase activity
NU955_RS09240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NU955_RS09255	COG0753	catalase activity
NU955_RS09265	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
NU955_RS09290	COG3539	Fimbrial protein
NU955_RS09340	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NU955_RS09350	COG2072	flavoprotein involved in K transport
NU955_RS09360	COG1538	Outer membrane efflux protein
NU955_RS09365	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NU955_RS09370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NU955_RS09375	COG0745	RESPONSE REGULATOR receiver
NU955_RS09380	COG2205	protein histidine kinase activity
NU955_RS09395	COG2207	Transcriptional regulator
NU955_RS09410	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS09420	COG1073	alpha beta
NU955_RS09450	COG2801	Transposase and inactivated derivatives
NU955_RS09475	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NU955_RS09555	COG1120	ATPase activity
NU955_RS09560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NU955_RS09575	COG1064	alcohol dehydrogenase
NU955_RS09580	COG2207	Transcriptional regulator
NU955_RS09585	COG2084	Dehydrogenase
NU955_RS09595	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NU955_RS09600	COG0583	DNA-binding transcription factor activity
NU955_RS09610	COG0129	dihydroxy-acid dehydratase activity
NU955_RS09615	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS09645	COG0583	DNA-binding transcription factor activity
NU955_RS09660	COG2188	Transcriptional regulator
NU955_RS09730	COG1473	amidohydrolase
NU955_RS09740	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NU955_RS09740	COG0475	glutathione-regulated potassium exporter activity
NU955_RS09755	COG0583	DNA-binding transcription factor activity
NU955_RS09760	COG1335	isochorismatase
NU955_RS09770	COG1309	transcriptional regulator
NU955_RS09800	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NU955_RS09810	COG0446	pyridine nucleotide-disulphide oxidoreductase
NU955_RS09810	COG1902	pentaerythritol trinitrate reductase activity
NU955_RS09825	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS09845	COG2186	Transcriptional regulator
NU955_RS09855	COG0583	DNA-binding transcription factor activity
NU955_RS09860	COG4948	Mandelate Racemase Muconate Lactonizing
NU955_RS09865	COG4829	muconolactone delta-isomerase
NU955_RS09875	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NU955_RS09880	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NU955_RS09885	COG0183	Belongs to the thiolase family
NU955_RS09890	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NU955_RS09900	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS09910	COG3733	amine oxidase
NU955_RS09920	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NU955_RS09930	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS09940	COG4638	Rieske (2fe-2S)
NU955_RS09960	COG0154	amidase activity
NU955_RS09970	COG2814	Major facilitator Superfamily
NU955_RS09995	COG1960	acyl-CoA dehydrogenase activity
NU955_RS10000	COG0583	DNA-binding transcription factor activity
NU955_RS10005	COG1414	Transcriptional regulator
NU955_RS10020	COG2391	methyltransferase activity
NU955_RS10030	COG4993	Dehydrogenase
NU955_RS10035	COG3659	wide pore channel activity
NU955_RS10040	COG3420	alginic acid biosynthetic process
NU955_RS10045	COG0710	3-dehydroquinate dehydratase activity
NU955_RS10050	COG3485	protocatechuate 3,4-dioxygenase
NU955_RS10055	COG3485	protocatechuate 3,4-dioxygenase
NU955_RS10060	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NU955_RS10065	COG2271	Major facilitator Superfamily
NU955_RS10070	COG0596	Alpha beta hydrolase
NU955_RS10075	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NU955_RS10080	COG0183	Belongs to the thiolase family
NU955_RS10085	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NU955_RS10090	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NU955_RS10100	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NU955_RS10105	COG2323	membrane
NU955_RS10150	COG1902	pentaerythritol trinitrate reductase activity
NU955_RS10150	COG0446	pyridine nucleotide-disulphide oxidoreductase
NU955_RS10175	COG0542	response to heat
NU955_RS10180	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
NU955_RS10210	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NU955_RS10215	COG0569	domain protein
NU955_RS10220	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NU955_RS10235	COG4774	siderophore transport
NU955_RS10240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NU955_RS10250	COG1585	Membrane protein implicated in regulation of membrane protease activity
NU955_RS10265	COG1294	oxidase, subunit
NU955_RS10270	COG4890	Cyd operon protein YbgT
NU955_RS10285	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
NU955_RS10295	COG0552	protein localization to endoplasmic reticulum
NU955_RS10320	COG0517	IMP dehydrogenase activity
NU955_RS10320	COG0516	GMP reductase activity
NU955_RS10325	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NU955_RS10330	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NU955_RS10340	COG0583	DNA-binding transcription factor activity
NU955_RS10345	COG0024	Methionine aminopeptidase
NU955_RS10375	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NU955_RS10375	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NU955_RS10380	COG1105	Belongs to the carbohydrate kinase PfkB family
NU955_RS10385	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NU955_RS10385	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NU955_RS10385	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
NU955_RS10400	COG5001	Diguanylate cyclase
NU955_RS10400	COG3300	MHYT domain
NU955_RS10415	COG2135	peptidase activity
NU955_RS10420	COG0659	secondary active sulfate transmembrane transporter activity
NU955_RS10440	COG1113	amino acid transport
NU955_RS10450	COG1522	sequence-specific DNA binding
NU955_RS10475	COG1011	Hydrolase
NU955_RS10480	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
NU955_RS10490	COG2137	regulation of response to DNA damage stimulus
NU955_RS10505	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NU955_RS10525	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NU955_RS10540	COG0575	Belongs to the CDS family
NU955_RS10545	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NU955_RS10565	COG3852	Histidine kinase
NU955_RS10570	COG2204	response regulator
NU955_RS10625	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NU955_RS10630	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
NU955_RS10650	COG0697	spore germination
NU955_RS10655	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NU955_RS10665	COG0303	'Molybdopterin
NU955_RS10670	COG0315	cyclic pyranopterin monophosphate synthase activity
NU955_RS10670	COG0521	Mo-molybdopterin cofactor biosynthetic process
NU955_RS10685	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NU955_RS10690	COG0243	molybdopterin cofactor binding
NU955_RS10700	COG0243	molybdopterin cofactor binding
NU955_RS10705	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NU955_RS10710	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NU955_RS10710	COG2146	nitrite reductase [NAD(P)H] activity
NU955_RS10720	COG0745	RESPONSE REGULATOR receiver
NU955_RS10725	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NU955_RS10725	COG1116	anion transmembrane transporter activity
NU955_RS10745	COG0511	ligase activity, forming carbon-carbon bonds
NU955_RS10760	COG2814	Major facilitator Superfamily
NU955_RS10780	COG0069	glutamate synthase activity
NU955_RS10800	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NU955_RS10810	COG1454	alcohol dehydrogenase
NU955_RS10815	COG0824	Thioesterase
NU955_RS10825	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NU955_RS10850	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NU955_RS10855	COG2030	dehydratase
NU955_RS10865	COG0183	Belongs to the thiolase family
NU955_RS10880	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NU955_RS10890	COG1522	sequence-specific DNA binding
NU955_RS10895	COG3135	benzoate transporter
NU955_RS10905	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NU955_RS10930	COG0589	response to stress
NU955_RS10935	COG0488	(ABC) transporter
NU955_RS10955	COG4773	Receptor
NU955_RS10985	COG0668	transmembrane transport
NU955_RS10995	COG1309	transcriptional regulator
NU955_RS11005	COG2801	Transposase and inactivated derivatives
NU955_RS11020	COG1605	Chorismate mutase
NU955_RS11030	COG4221	oxidoreductase activity
NU955_RS11060	COG0308	aminopeptidase N
NU955_RS11085	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NU955_RS11090	COG1454	alcohol dehydrogenase
NU955_RS11110	COG0531	amino acid
NU955_RS11115	COG4303	Ethanolamine ammonia lyase large subunit
NU955_RS11120	COG4302	ethanolamine ammonia-lyase activity
NU955_RS11125	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NU955_RS11125	COG0519	Catalyzes the synthesis of GMP from XMP
NU955_RS11130	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NU955_RS11155	COG0697	spore germination
NU955_RS11160	COG1923	regulation of RNA biosynthetic process
NU955_RS11170	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NU955_RS11175	COG0802	atpase or kinase
NU955_RS11195	COG1187	pseudouridine synthase activity
NU955_RS11210	COG0583	DNA-binding transcription factor activity
NU955_RS11225	COG2814	Major facilitator Superfamily
NU955_RS11230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NU955_RS11255	COG0729	surface antigen
NU955_RS11275	COG0174	glutamine synthetase
NU955_RS11280	COG0745	RESPONSE REGULATOR receiver
NU955_RS11285	COG2205	protein histidine kinase activity
NU955_RS11295	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NU955_RS11300	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NU955_RS11325	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NU955_RS11330	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NU955_RS11335	COG1960	acyl-CoA dehydrogenase activity
NU955_RS11365	COG0583	DNA-binding transcription factor activity
NU955_RS11380	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NU955_RS11390	COG3658	cytochrome
NU955_RS11395	COG1215	transferase activity, transferring glycosyl groups
NU955_RS11400	COG0726	polysaccharide deacetylase
NU955_RS11400	COG1649	PFAM Uncharacterised BCR, COG1649
NU955_RS11425	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NU955_RS11430	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NU955_RS11440	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NU955_RS11465	COG0305	Participates in initiation and elongation during chromosome replication
NU955_RS11470	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NU955_RS11480	COG1305	Transglutaminase-like
NU955_RS11490	COG2308	Evidence 4 Homologs of previously reported genes of
NU955_RS11520	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NU955_RS11525	COG0138	bifunctional purine biosynthesis protein purh
NU955_RS11530	COG0151	Belongs to the GarS family
NU955_RS11535	COG1464	Belongs to the NlpA lipoprotein family
NU955_RS11540	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NU955_RS11545	COG2011	ABC-type metal ion transport system permease component
NU955_RS11550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NU955_RS11560	COG1301	dicarboxylic acid transport
NU955_RS11590	COG1794	racemase activity, acting on amino acids and derivatives
NU955_RS11610	COG0745	RESPONSE REGULATOR receiver
NU955_RS11615	COG0642	Histidine kinase
NU955_RS11620	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NU955_RS11630	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NU955_RS11670	COG2351	hydroxyisourate hydrolase activity
NU955_RS11680	COG3008	intermembrane lipid transfer
NU955_RS11680	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NU955_RS11685	COG2995	paraquat-inducible protein a
NU955_RS11710	COG2801	Transposase and inactivated derivatives
NU955_RS11715	COG2801	Transposase and inactivated derivatives
NU955_RS11730	COG1051	belongs to the nudix hydrolase family
NU955_RS11735	COG0477	Major facilitator Superfamily
NU955_RS11785	COG2186	Transcriptional regulator
NU955_RS11795	COG0786	glutamate:sodium symporter activity
NU955_RS11800	COG3243	poly(R)-hydroxyalkanoic acid synthase
NU955_RS11825	COG3111	PFAM Bacterial OB fold (BOF) protein
NU955_RS11895	COG2831	hemolysin activation secretion protein
NU955_RS11950	COG1610	YqeY-like protein
NU955_RS11955	COG4783	chaperone-mediated protein folding
NU955_RS11980	COG1286	toxin biosynthetic process
NU955_RS12010	COG0778	Nitroreductase
NU955_RS12020	COG0513	Belongs to the DEAD box helicase family
NU955_RS12045	COG2363	Small membrane protein
NU955_RS12075	COG1234	tRNA 3'-trailer cleavage
NU955_RS12080	COG2195	Cleaves the N-terminal amino acid of tripeptides
NU955_RS12090	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NU955_RS12105	COG1960	acyl-CoA dehydrogenase activity
NU955_RS12110	COG1301	dicarboxylic acid transport
NU955_RS12115	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NU955_RS12120	COG3139	Protein of unknown function (DUF1315)
NU955_RS12125	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NU955_RS12130	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NU955_RS12140	COG0494	nUDIX hydrolase
NU955_RS12150	COG0642	Histidine kinase
NU955_RS12165	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NU955_RS12175	COG1720	tRNA m6t6A37 methyltransferase activity
NU955_RS12195	COG0826	peptidase U32
NU955_RS12200	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NU955_RS12215	COG4160	amino acid transport
NU955_RS12220	COG4215	(ABC) transporter
NU955_RS12235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NU955_RS12280	COG1131	(ABC) transporter
NU955_RS12285	COG0842	Transport permease protein
NU955_RS12300	COG0772	Belongs to the SEDS family
NU955_RS12305	COG2951	lytic endotransglycosylase activity
NU955_RS12330	COG2207	Transcriptional regulator
NU955_RS12345	COG0052	Belongs to the universal ribosomal protein uS2 family
NU955_RS12350	COG0024	Methionine aminopeptidase
NU955_RS12360	COG2223	nitrite transmembrane transporter activity
NU955_RS12370	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NU955_RS12375	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NU955_RS12380	COG1960	acyl-CoA dehydrogenase activity
NU955_RS12395	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
NU955_RS12400	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NU955_RS12405	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NU955_RS12425	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NU955_RS12430	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NU955_RS12435	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NU955_RS12470	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
NU955_RS12480	COG0174	glutamine synthetase
NU955_RS12495	COG0512	Glutamine amidotransferase of anthranilate synthase
NU955_RS12500	COG0308	aminopeptidase N
NU955_RS12530	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NU955_RS12540	COG0302	gtp cyclohydrolase
NU955_RS12560	COG3739	integral membrane protein
NU955_RS12575	COG1169	isochorismate synthase
NU955_RS12580	COG2977	Belongs to the P-Pant transferase superfamily
NU955_RS12585	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
NU955_RS12590	COG1132	(ABC) transporter
NU955_RS12595	COG1132	(ABC) transporter
NU955_RS12610	COG1535	isochorismatase
NU955_RS12610	COG3433	isochorismatase activity
NU955_RS12615	COG1021	2,3-dihydroxybenzoate-AMP ligase
NU955_RS12620	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NU955_RS12630	COG4774	siderophore transport
NU955_RS12635	COG4607	ABC-type enterochelin transport system periplasmic component
NU955_RS12640	COG4604	ABC transporter, ATP-binding protein
NU955_RS12645	COG4605	iron ion homeostasis
NU955_RS12650	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NU955_RS12660	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NU955_RS12675	COG2964	Protein conserved in bacteria
NU955_RS12685	COG1741	Belongs to the pirin family
NU955_RS12705	COG2801	Transposase and inactivated derivatives
NU955_RS12740	COG2879	small protein
NU955_RS12745	COG1966	Carbon starvation protein
NU955_RS12765	COG4943	cyclic-guanylate-specific phosphodiesterase activity
NU955_RS12790	COG1067	ATP-dependent peptidase activity
NU955_RS12795	COG0583	DNA-binding transcription factor activity
NU955_RS12820	COG1686	Belongs to the peptidase S11 family
NU955_RS12825	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NU955_RS12860	COG0616	signal peptide processing
NU955_RS12865	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NU955_RS12875	COG0573	inorganic phosphate transmembrane transporter activity
NU955_RS12880	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NU955_RS12885	COG1113	amino acid transport
NU955_RS12890	COG3961	Belongs to the TPP enzyme family
NU955_RS12895	COG1522	sequence-specific DNA binding
NU955_RS12905	COG0076	glutamate decarboxylase activity
NU955_RS12910	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NU955_RS12935	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NU955_RS12970	COG0352	thiamine-phosphate diphosphorylase activity
NU955_RS12995	COG0612	Peptidase, M16
NU955_RS13005	COG1823	symporter activity
NU955_RS13010	COG0583	DNA-binding transcription factor activity
NU955_RS13015	COG0477	Major facilitator Superfamily
NU955_RS13040	COG1187	pseudouridine synthase activity
NU955_RS13055	COG1686	Belongs to the peptidase S11 family
NU955_RS13060	COG1252	NADH dehydrogenase
NU955_RS13070	COG0415	Belongs to the DNA photolyase family
NU955_RS13085	COG1215	transferase activity, transferring glycosyl groups
NU955_RS13115	COG2070	2-Nitropropane dioxygenase
NU955_RS13170	COG0556	nucleotide-excision repair
NU955_RS13190	COG0436	Aminotransferase
NU955_RS13220	COG4221	oxidoreductase activity
NU955_RS13230	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NU955_RS13235	COG1381	Involved in DNA repair and RecF pathway recombination
NU955_RS13245	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NU955_RS13260	COG0681	Belongs to the peptidase S26 family
NU955_RS13275	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NU955_RS13295	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NU955_RS13300	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NU955_RS13305	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NU955_RS13315	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NU955_RS13320	COG4208	sulfate ABC transporter
NU955_RS13325	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NU955_RS13330	COG0583	DNA-binding transcription factor activity
NU955_RS13335	COG4625	pathogenesis
NU955_RS13350	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NU955_RS13365	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NU955_RS13375	COG1051	belongs to the nudix hydrolase family
NU955_RS13375	COG1056	cytidyltransferase-related domain
NU955_RS13380	COG1024	Enoyl-CoA hydratase
NU955_RS13395	COG2814	Major facilitator Superfamily
NU955_RS13400	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NU955_RS13400	COG0047	phosphoribosylformylglycinamidine synthase activity
NU955_RS13425	COG0824	Thioesterase
NU955_RS13445	COG0823	Involved in the tonB-independent uptake of proteins
NU955_RS13465	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NU955_RS13500	COG0628	permease
NU955_RS13510	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NU955_RS13515	COG0596	Alpha beta hydrolase
NU955_RS13520	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NU955_RS13520	COG0616	signal peptide processing
NU955_RS13530	COG0658	competence protein
NU955_RS13530	COG2333	competence protein COMEC
NU955_RS13535	COG1136	(ABC) transporter
NU955_RS13540	COG4591	ABC-type transport system involved in lipoprotein release permease component
NU955_RS13575	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NU955_RS13595	COG0463	Glycosyl transferase, family 2
NU955_RS13625	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NU955_RS13630	COG1280	lysine exporter protein (LysE YggA)
NU955_RS13635	COG2267	carboxylic ester hydrolase activity
NU955_RS13645	COG0019	diaminopimelate decarboxylase activity
NU955_RS13655	COG1113	amino acid transport
NU955_RS13670	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
NU955_RS13680	COG3339	Conserved Protein
NU955_RS13685	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NU955_RS13690	COG0243	molybdopterin cofactor binding
NU955_RS13695	COG1929	Belongs to the glycerate kinase type-1 family
NU955_RS13710	COG0778	Nitroreductase
NU955_RS13725	COG2801	Transposase and inactivated derivatives
NU955_RS13755	COG3811	Belongs to the UPF0386 family
NU955_RS13765	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NU955_RS13790	COG2059	Chromate
NU955_RS13800	COG2015	COG2015, Alkyl sulfatase and related hydrolases
NU955_RS13810	COG1230	cation diffusion facilitator family transporter
NU955_RS13825	COG2814	Major facilitator Superfamily
NU955_RS13890	COG3328	transposase activity
NU955_RS13900	COG2801	Transposase and inactivated derivatives
NU955_RS13955	COG0582	viral genome integration into host DNA
NU955_RS13965	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NU955_RS13985	COG0741	lytic transglycosylase activity
NU955_RS14005	COG0584	glycerophosphoryl diester phosphodiesterase
NU955_RS14010	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NU955_RS14030	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NU955_RS14035	COG1597	lipid kinase activity
NU955_RS14050	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NU955_RS14055	COG0477	Major facilitator Superfamily
NU955_RS14105	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NU955_RS14110	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NU955_RS14135	COG0505	Belongs to the CarA family
NU955_RS14155	COG0589	response to stress
NU955_RS14170	COG2843	Capsule synthesis protein
NU955_RS14190	COG2321	neutral zinc metallopeptidase
NU955_RS14195	COG2354	Protein conserved in bacteria
NU955_RS14215	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NU955_RS14240	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NU955_RS14245	COG1053	succinate dehydrogenase
NU955_RS14250	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
NU955_RS14255	COG2009	succinate dehydrogenase
NU955_RS14290	COG2921	Belongs to the UPF0250 family
NU955_RS14295	COG0321	lipoyl(octanoyl) transferase activity
NU955_RS14310	COG0531	amino acid
NU955_RS14320	COG1733	regulation of RNA biosynthetic process
NU955_RS14325	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NU955_RS14330	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NU955_RS14330	COG1648	precorrin-2 dehydrogenase activity
NU955_RS14345	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NU955_RS14375	COG0671	phosphoesterase, PA-phosphatase related
NU955_RS14380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NU955_RS14390	COG1538	Outer membrane efflux protein
NU955_RS14395	COG0393	Putative heavy-metal-binding
NU955_RS14410	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS14420	COG0525	valine-tRNA ligase activity
NU955_RS14440	COG0583	DNA-binding transcription factor activity
NU955_RS14445	COG0004	ammonium transporteR
NU955_RS14455	COG0642	Histidine kinase
NU955_RS14460	COG0745	RESPONSE REGULATOR receiver
NU955_RS14465	COG2194	sulfuric ester hydrolase activity
NU955_RS14485	COG1752	Esterase of the alpha-beta hydrolase superfamily
NU955_RS14500	COG2315	Protein conserved in bacteria
NU955_RS14505	COG0142	geranyltranstransferase activity
NU955_RS14510	COG2828	Protein conserved in bacteria
NU955_RS14515	COG1113	amino acid transport
NU955_RS14535	COG2207	Transcriptional regulator
NU955_RS14560	COG2249	NAD(P)H dehydrogenase (quinone) activity
NU955_RS14570	COG0560	Phosphoserine phosphatase
NU955_RS14580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NU955_RS14590	COG1530	ribonuclease E activity
NU955_RS14595	COG0424	maF-like protein
NU955_RS14600	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
NU955_RS14605	COG1792	Involved in formation and maintenance of cell shape
NU955_RS14610	COG1077	Cell shape determining protein MreB Mrl
NU955_RS14615	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NU955_RS14625	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NU955_RS14650	COG3590	peptidase
NU955_RS14655	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
NU955_RS14665	COG1752	Esterase of the alpha-beta hydrolase superfamily
NU955_RS14670	COG1115	amino acid carrier protein
NU955_RS14690	COG2814	Major facilitator Superfamily
NU955_RS14695	COG1289	transmembrane transporter activity
NU955_RS14705	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NU955_RS14745	COG1376	ErfK ybiS ycfS ynhG family protein
NU955_RS14750	COG2832	Protein of unknown function (DUF454)
NU955_RS14760	COG5510	response to toxic substance
NU955_RS14785	COG0840	transmembrane signaling receptor activity
NU955_RS14830	COG2824	Alkylphosphonate utilization operon protein PhnA
NU955_RS14835	COG3189	MarR family transcriptional regulator
NU955_RS14845	COG0354	folic acid binding
NU955_RS14850	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NU955_RS14860	COG0679	Auxin Efflux Carrier
NU955_RS14865	COG1902	pentaerythritol trinitrate reductase activity
NU955_RS14870	COG4772	TonB-dependent receptor
NU955_RS14875	COG2094	Belongs to the DNA glycosylase MPG family
NU955_RS14900	COG1217	gtp-binding protein TYPA
NU955_RS14905	COG2233	PERMEase
NU955_RS14915	COG0833	amino acid
NU955_RS14920	COG1690	Belongs to the RtcB family
NU955_RS14930	COG2885	chlorophyll binding
NU955_RS14930	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
NU955_RS14940	COG0183	Belongs to the thiolase family
NU955_RS14960	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NU955_RS14980	COG2207	Transcriptional regulator
NU955_RS14985	COG0183	Belongs to the thiolase family
NU955_RS15015	COG1272	protein, Hemolysin III
NU955_RS15020	COG0477	Major facilitator Superfamily
NU955_RS15035	COG0450	alkyl hydroperoxide reductase
NU955_RS15055	COG0285	dihydrofolate synthase activity
NU955_RS15105	COG2096	Adenosyltransferase
NU955_RS15125	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
NU955_RS15130	COG0745	RESPONSE REGULATOR receiver
NU955_RS15135	COG2205	protein histidine kinase activity
NU955_RS15145	COG1960	acyl-CoA dehydrogenase activity
NU955_RS15150	COG1960	acyl-CoA dehydrogenase activity
NU955_RS15200	COG1215	transferase activity, transferring glycosyl groups
NU955_RS15215	COG1091	dTDP-4-dehydrorhamnose reductase activity
NU955_RS15230	COG0438	transferase activity, transferring glycosyl groups
NU955_RS15235	COG0726	polysaccharide deacetylase
NU955_RS15250	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NU955_RS15255	COG2205	protein histidine kinase activity
NU955_RS15285	COG1862	Preprotein translocase
NU955_RS15295	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NU955_RS15300	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NU955_RS15310	COG3781	membrane
NU955_RS15315	COG0613	PHP domain protein
NU955_RS15325	COG2350	Protein conserved in bacteria
NU955_RS15355	COG1607	acyl-coa hydrolase
NU955_RS15415	COG2199	diguanylate cyclase activity
NU955_RS15425	COG1408	metallophosphoesterase
NU955_RS15430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NU955_RS15440	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NU955_RS15460	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NU955_RS15465	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NU955_RS15480	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NU955_RS15490	COG2969	positive regulation of protein catabolic process
NU955_RS15510	COG1960	acyl-CoA dehydrogenase activity
NU955_RS15515	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NU955_RS15530	COG1309	transcriptional regulator
NU955_RS15535	COG1960	acyl-CoA dehydrogenase activity
NU955_RS15580	COG1183	phosphatidylcholine synthase activity
NU955_RS15585	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NU955_RS15615	COG0741	lytic transglycosylase activity
NU955_RS15615	COG1196	nuclear chromosome segregation
NU955_RS15615	COG0739	heme binding
NU955_RS15625	COG1702	phosphate starvation-inducible protein PhoH
NU955_RS15660	COG1295	ribonuclease BN
NU955_RS15665	COG0697	spore germination
NU955_RS15670	COG2169	Transcriptional regulator
NU955_RS15675	COG0179	Fumarylacetoacetate (FAA) hydrolase
NU955_RS15720	COG0557	exoribonuclease II activity
NU955_RS15725	COG0339	signal peptide processing
NU955_RS15730	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
NU955_RS15760	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NU955_RS15765	COG1960	acyl-CoA dehydrogenase activity
NU955_RS15920	COG0626	cystathionine gamma-synthase activity
NU955_RS15925	COG0433	COG0433 Predicted ATPase
NU955_RS15935	COG1017	nitric oxide dioxygenase activity
NU955_RS15935	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NU955_RS15940	COG1959	2 iron, 2 sulfur cluster binding
NU955_RS15955	COG1301	dicarboxylic acid transport
NU955_RS15960	COG1946	Acyl-CoA thioesterase
NU955_RS15980	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NU955_RS15985	COG1040	competence protein
NU955_RS15990	COG0494	nUDIX hydrolase
NU955_RS16000	COG0598	Magnesium transport protein CorA
NU955_RS16010	COG2854	intermembrane phospholipid transfer
NU955_RS16020	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NU955_RS16025	COG1127	ABC transporter
NU955_RS16035	COG0513	Belongs to the DEAD box helicase family
NU955_RS16055	COG0408	coproporphyrinogen oxidase activity
NU955_RS16070	COG1960	acyl-CoA dehydrogenase activity
NU955_RS16080	COG1983	PspC domain protein
NU955_RS16085	COG0517	IMP dehydrogenase activity
NU955_RS16120	COG1106	Psort location Cytoplasmic, score
NU955_RS16155	COG0583	DNA-binding transcription factor activity
NU955_RS16195	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS16205	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NU955_RS16210	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NU955_RS16215	COG0833	amino acid
NU955_RS16245	COG1192	Involved in chromosome partitioning
NU955_RS16250	COG0628	permease
NU955_RS16260	COG1289	transmembrane transporter activity
NU955_RS16275	COG2249	NAD(P)H dehydrogenase (quinone) activity
NU955_RS16280	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
NU955_RS16290	COG0277	FAD linked oxidase domain protein
NU955_RS16295	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NU955_RS16320	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NU955_RS16325	COG5380	lipid catabolic process
NU955_RS16345	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NU955_RS16395	COG0194	GDP metabolic process
NU955_RS16410	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NU955_RS16430	COG3307	-O-antigen
NU955_RS16450	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NU955_RS16455	COG1704	LemA family
NU955_RS16465	COG0493	'glutamate synthase
NU955_RS16470	COG0067	glutamate synthase
NU955_RS16470	COG0069	glutamate synthase activity
NU955_RS16470	COG0070	glutamate synthase
NU955_RS16520	COG2226	methyltransferase
NU955_RS16535	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NU955_RS16540	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NU955_RS16585	COG0833	amino acid
NU955_RS16650	COG0488	(ABC) transporter
NU955_RS16655	COG2873	o-acetylhomoserine
NU955_RS16660	COG4221	oxidoreductase activity
NU955_RS16665	COG0659	secondary active sulfate transmembrane transporter activity
NU955_RS16690	COG0427	acetyl-CoA hydrolase
NU955_RS16720	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NU955_RS16760	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NU955_RS16825	COG2249	NAD(P)H dehydrogenase (quinone) activity
NU955_RS16830	COG1733	regulation of RNA biosynthetic process
NU955_RS16865	COG0667	Aldo Keto reductase
NU955_RS16885	COG0583	DNA-binding transcription factor activity
NU955_RS16890	COG2814	Major facilitator Superfamily
NU955_RS16910	COG1309	transcriptional regulator
NU955_RS16980	COG1335	isochorismatase
NU955_RS16990	COG1012	belongs to the aldehyde dehydrogenase family
NU955_RS16995	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NU955_RS17005	COG1113	amino acid transport
NU955_RS17015	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
NU955_RS17030	COG2814	Major facilitator Superfamily
NU955_RS17040	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NU955_RS17040	COG0351	phosphomethylpyrimidine kinase
NU955_RS17040	COG0352	thiamine-phosphate diphosphorylase activity
NU955_RS17060	COG1309	transcriptional regulator
NU955_RS17065	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NU955_RS17080	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NU955_RS17090	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NU955_RS17095	COG3162	membrane
NU955_RS17100	COG0784	Response regulator, receiver
NU955_RS17100	COG2205	protein histidine kinase activity
NU955_RS17100	COG2198	Histidine kinase
NU955_RS17125	COG1522	sequence-specific DNA binding
NU955_RS17130	COG1335	isochorismatase
NU955_RS17135	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NU955_RS17145	COG0668	transmembrane transport
NU955_RS17150	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NU955_RS17155	COG1519	Transferase
NU955_RS17160	COG1902	pentaerythritol trinitrate reductase activity
NU955_RS17180	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NU955_RS17205	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NU955_RS17205	COG0426	domain, Protein
NU955_RS17210	COG4774	siderophore transport
NU955_RS17215	COG2119	membrane
NU955_RS17225	COG0508	dehydrogenase complex catalyzes the overall conversion of
NU955_RS17235	COG4942	peptidase
NU955_RS17250	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NU955_RS17260	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NU955_RS17280	COG0189	ligase activity
NU955_RS17310	COG0708	Exodeoxyribonuclease III
NU955_RS17315	COG1393	Belongs to the ArsC family
NU955_RS17330	COG3706	GGDEF domain
NU955_RS17365	COG2351	hydroxyisourate hydrolase activity
NU955_RS17370	COG2233	PERMEase
NU955_RS17380	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NU955_RS17390	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
NU955_RS17395	COG1028	Short-chain dehydrogenase reductase Sdr
NU955_RS17405	COG3150	esterase
NU955_RS17450	COG3409	Peptidoglycan-binding domain 1 protein
NU955_RS17450	COG1388	LysM domain
NU955_RS17450	COG5632	N-Acetylmuramoyl-L-alanine amidase
NU955_RS17465	COG2918	glutathione biosynthetic process
NU955_RS17480	COG2733	membrane
NU955_RS17485	COG0436	Aminotransferase
NU955_RS17490	COG0534	Mate efflux family protein
NU955_RS17575	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NU955_RS17580	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NU955_RS17590	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NU955_RS17650	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NU955_RS17665	COG0010	Belongs to the arginase family
NU955_RS17695	COG2188	Transcriptional regulator
NU955_RS17705	COG0523	cobalamin synthesis protein
NU955_RS17715	COG1113	amino acid transport
NU955_RS17725	COG0625	glutathione transferase activity
NU955_RS17745	COG1683	Conserved Protein
NU955_RS17750	COG0534	Mate efflux family protein
NU955_RS17755	COG0385	Bile acid
NU955_RS17760	COG1335	isochorismatase
NU955_RS17765	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NU955_RS17785	COG2116	formate transmembrane transporter activity
NU955_RS17790	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NU955_RS17795	COG2133	pyrroloquinoline quinone binding
NU955_RS17800	COG2983	Belongs to the UPF0260 family
NU955_RS17820	COG1194	a g-specific adenine glycosylase
NU955_RS17835	COG2818	Glycosylase
NU955_RS17840	COG1064	alcohol dehydrogenase
NU955_RS17845	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NU955_RS17860	COG0583	DNA-binding transcription factor activity
NU955_RS17865	COG0656	L-ascorbic acid biosynthetic process
NU955_RS17870	COG2814	Major facilitator Superfamily
NU955_RS17900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NU955_RS17905	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NU955_RS17920	COG2233	PERMEase
NU955_RS17925	COG0583	DNA-binding transcription factor activity
NU955_RS17960	COG0733	neurotransmitter:sodium symporter activity
NU955_RS18000	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NU955_RS18005	COG0657	acetylesterase activity
NU955_RS18025	COG0583	DNA-binding transcription factor activity
NU955_RS18060	COG2951	lytic endotransglycosylase activity
NU955_RS18065	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NU955_RS18080	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NU955_RS18090	COG0671	phosphoesterase, PA-phosphatase related
NU955_RS18095	COG0861	Integral membrane protein TerC family
NU955_RS18105	COG0754	glutathionylspermidine amidase activity
NU955_RS18115	COG0402	S-adenosylhomocysteine deaminase activity
NU955_RS18130	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NU955_RS18135	COG1230	cation diffusion facilitator family transporter
NU955_RS18150	COG0706	membrane insertase activity
NU955_RS18170	COG1192	Involved in chromosome partitioning
NU955_RS18175	COG1475	DNA binding
NU955_RS18330	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
NU955_RS18355	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NU955_RS18360	COG3657	addiction module killer protein
NU955_RS18385	COG1063	alcohol dehydrogenase
NU955_RS18395	COG3328	transposase activity
NU955_RS18420	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
NU955_RS18430	COG1979	alcohol dehydrogenase
NU955_RS18440	COG1902	pentaerythritol trinitrate reductase activity
NU955_RS18450	COG1309	transcriptional regulator
NU955_RS18455	COG2130	NADP-dependent
NU955_RS18470	COG0582	viral genome integration into host DNA
NU955_RS18475	COG3328	transposase activity
NU955_RS18515	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NU955_RS18575	COG0358	DNA primase activity
NU955_RS18700	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NU955_RS18780	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NU955_RS18825	COG0071	Belongs to the small heat shock protein (HSP20) family
NU955_RS18830	COG0542	response to heat
NU955_RS18875	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NU955_RS18880	COG0501	Belongs to the peptidase M48B family
NU955_RS18915	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NU955_RS18935	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NU955_RS18945	COG5002	protein histidine kinase activity
NU955_RS18950	COG0745	RESPONSE REGULATOR receiver
NU955_RS18965	COG3173	Aminoglycoside phosphotransferase
NU955_RS18970	COG0488	(ABC) transporter
NU955_RS18975	COG3077	Addiction module antitoxin, RelB DinJ family
NU955_RS19045	COG3621	Patatin-like phospholipase
NU955_RS19070	COG0582	viral genome integration into host DNA
NU955_RS19095	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NU955_RS19100	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NU955_RS19250	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NU955_RS19285	COG1660	Displays ATPase and GTPase activities